Query 048535
Match_columns 409
No_of_seqs 559 out of 3592
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 10:23:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048535.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048535hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 7E-49 1.5E-53 381.3 23.9 249 99-350 61-355 (361)
2 KOG0197 Tyrosine kinases [Sign 100.0 1.6E-42 3.5E-47 335.0 13.6 230 113-350 206-464 (468)
3 KOG0581 Mitogen-activated prot 100.0 3.3E-41 7.2E-46 312.6 17.1 224 114-343 80-335 (364)
4 KOG0196 Tyrosine kinase, EPH ( 100.0 9.6E-42 2.1E-46 339.2 13.9 230 115-352 631-896 (996)
5 KOG0192 Tyrosine kinase specif 100.0 1.2E-40 2.6E-45 321.8 20.6 228 116-349 44-305 (362)
6 KOG0595 Serine/threonine-prote 100.0 5.9E-39 1.3E-43 300.2 22.4 244 112-389 9-274 (429)
7 KOG0575 Polo-like serine/threo 100.0 2.2E-39 4.9E-44 316.6 20.1 224 113-343 18-269 (592)
8 KOG1026 Nerve growth factor re 100.0 4.7E-40 1E-44 332.5 15.4 235 111-351 484-766 (774)
9 KOG0615 Serine/threonine prote 100.0 1.7E-39 3.6E-44 303.7 15.5 224 112-342 171-436 (475)
10 KOG0659 Cdk activating kinase 100.0 2.9E-38 6.3E-43 280.3 15.3 265 113-390 2-288 (318)
11 KOG0591 NIMA (never in mitosis 100.0 2.1E-39 4.6E-44 289.5 8.1 231 113-346 19-284 (375)
12 KOG0600 Cdc2-related protein k 100.0 3.7E-38 8.1E-43 301.3 13.3 261 112-388 116-405 (560)
13 KOG0194 Protein tyrosine kinas 100.0 1.1E-36 2.4E-41 298.7 17.2 236 112-353 156-426 (474)
14 KOG0593 Predicted protein kina 100.0 4.4E-37 9.5E-42 277.2 11.9 172 113-291 2-188 (396)
15 KOG4278 Protein tyrosine kinas 100.0 1.6E-37 3.5E-42 301.9 9.6 239 105-351 259-527 (1157)
16 KOG0592 3-phosphoinositide-dep 100.0 6.9E-37 1.5E-41 294.8 13.8 248 110-391 70-346 (604)
17 KOG0193 Serine/threonine prote 100.0 9.9E-37 2.1E-41 297.0 14.7 235 102-349 381-655 (678)
18 KOG0598 Ribosomal protein S6 k 100.0 3.4E-36 7.4E-41 279.2 17.5 246 112-390 24-288 (357)
19 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.6E-36 3.6E-41 294.4 16.2 233 111-348 5-335 (338)
20 KOG0661 MAPK related serine/th 100.0 5.9E-37 1.3E-41 291.1 11.2 270 112-392 9-300 (538)
21 KOG0198 MEKK and related serin 100.0 4.9E-36 1.1E-40 281.9 16.1 227 113-344 17-277 (313)
22 KOG1094 Discoidin domain recep 100.0 1.2E-35 2.6E-40 287.6 17.9 232 111-347 536-804 (807)
23 KOG1095 Protein tyrosine kinas 100.0 1.4E-35 3E-40 310.1 19.4 235 112-350 691-964 (1025)
24 KOG0660 Mitogen-activated prot 100.0 3E-36 6.4E-41 278.6 12.4 269 110-390 19-317 (359)
25 cd05096 PTKc_DDR1 Catalytic do 100.0 8.9E-35 1.9E-39 278.1 22.1 229 112-346 4-304 (304)
26 KOG0616 cAMP-dependent protein 100.0 3.2E-35 6.8E-40 264.6 17.2 244 113-390 44-304 (355)
27 KOG3653 Transforming growth fa 100.0 9.4E-35 2E-39 276.0 21.2 231 113-352 210-508 (534)
28 KOG0658 Glycogen synthase kina 100.0 3.4E-36 7.4E-41 278.7 10.6 260 114-392 25-315 (364)
29 KOG0663 Protein kinase PITSLRE 100.0 2.2E-35 4.7E-40 269.4 14.8 266 112-390 75-368 (419)
30 KOG0585 Ca2+/calmodulin-depend 100.0 7.2E-35 1.6E-39 276.7 18.0 248 111-390 95-379 (576)
31 KOG0583 Serine/threonine prote 100.0 1.3E-34 2.9E-39 282.0 19.9 225 110-341 14-273 (370)
32 PHA02988 hypothetical protein; 100.0 3.7E-34 8E-39 271.4 22.2 225 118-347 25-279 (283)
33 cd05104 PTKc_Kit Catalytic dom 100.0 4.9E-35 1.1E-39 288.3 16.6 233 109-347 31-374 (375)
34 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.8E-34 3.9E-39 270.7 19.4 227 113-347 5-265 (266)
35 KOG0597 Serine-threonine prote 100.0 1.3E-35 2.7E-40 286.6 11.6 241 113-388 2-256 (808)
36 KOG0594 Protein kinase PCTAIRE 100.0 1.2E-34 2.5E-39 268.7 16.8 263 113-392 11-311 (323)
37 PLN00113 leucine-rich repeat r 100.0 7.6E-34 1.7E-38 311.8 26.3 228 112-351 689-955 (968)
38 PF07714 Pkinase_Tyr: Protein 100.0 9.1E-35 2E-39 271.8 14.7 221 117-344 3-259 (259)
39 KOG0582 Ste20-like serine/thre 100.0 6.8E-34 1.5E-38 268.5 20.2 226 112-342 25-292 (516)
40 KOG1989 ARK protein kinase fam 100.0 4.4E-34 9.5E-39 290.4 20.0 240 111-354 35-318 (738)
41 cd05612 STKc_PRKX_like Catalyt 100.0 4.6E-34 1E-38 271.6 18.7 245 113-392 1-263 (291)
42 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.2E-34 1.6E-38 269.9 19.7 261 113-386 5-288 (288)
43 KOG0578 p21-activated serine/t 100.0 9.7E-35 2.1E-39 282.0 13.4 222 112-343 272-523 (550)
44 KOG0605 NDR and related serine 100.0 4.9E-34 1.1E-38 275.2 17.8 247 111-390 139-452 (550)
45 cd05106 PTKc_CSF-1R Catalytic 100.0 3E-34 6.4E-39 282.6 16.6 233 109-347 34-372 (374)
46 cd05105 PTKc_PDGFR_alpha Catal 100.0 8.7E-34 1.9E-38 281.1 19.7 233 110-348 34-398 (400)
47 cd05148 PTKc_Srm_Brk Catalytic 100.0 5.1E-34 1.1E-38 266.2 16.8 233 110-347 3-261 (261)
48 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.6E-33 5.7E-38 264.9 21.5 228 113-347 4-283 (284)
49 cd06649 PKc_MEK2 Catalytic dom 100.0 2.5E-33 5.3E-38 271.6 21.7 185 112-304 4-199 (331)
50 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.6E-33 3.5E-38 269.3 20.0 269 112-391 4-296 (303)
51 cd05108 PTKc_EGFR Catalytic do 100.0 9.8E-34 2.1E-38 272.5 18.3 229 113-350 7-271 (316)
52 cd05084 PTKc_Fes Catalytic dom 100.0 3.4E-33 7.3E-38 259.4 20.6 219 119-345 1-251 (252)
53 cd05039 PTKc_Csk_like Catalyti 100.0 3.3E-33 7.2E-38 260.1 20.3 226 112-346 5-255 (256)
54 cd05048 PTKc_Ror Catalytic Dom 100.0 2.7E-33 5.8E-38 264.6 20.0 228 113-346 5-282 (283)
55 cd05033 PTKc_EphR Catalytic do 100.0 2.6E-33 5.7E-38 262.4 19.7 228 112-347 3-265 (266)
56 PTZ00263 protein kinase A cata 100.0 1.4E-33 3.1E-38 273.1 18.4 215 113-336 18-259 (329)
57 cd05062 PTKc_IGF-1R Catalytic 100.0 1.8E-33 3.8E-38 265.3 18.4 231 110-346 3-277 (277)
58 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.8E-33 8.2E-38 259.9 20.4 226 113-345 4-256 (256)
59 KOG0611 Predicted serine/threo 100.0 1.8E-34 3.8E-39 269.0 11.2 223 112-343 52-303 (668)
60 cd05571 STKc_PKB Catalytic dom 100.0 1.9E-33 4.2E-38 271.4 18.7 215 119-342 1-250 (323)
61 cd05054 PTKc_VEGFR Catalytic d 100.0 9.2E-34 2E-38 275.3 16.5 233 112-349 6-335 (337)
62 cd05052 PTKc_Abl Catalytic dom 100.0 2.5E-33 5.4E-38 262.3 18.7 227 113-347 6-262 (263)
63 cd05082 PTKc_Csk Catalytic dom 100.0 6.5E-33 1.4E-37 258.3 21.1 226 113-346 6-255 (256)
64 cd06650 PKc_MEK1 Catalytic dom 100.0 2.4E-33 5.3E-38 271.9 18.9 270 112-390 4-306 (333)
65 KOG4257 Focal adhesion tyrosin 100.0 2.5E-34 5.5E-39 280.0 11.7 226 115-349 391-651 (974)
66 cd05075 PTKc_Axl Catalytic dom 100.0 4.7E-33 1E-37 261.3 20.0 228 115-347 1-271 (272)
67 cd05068 PTKc_Frk_like Catalyti 100.0 4.2E-33 9.1E-38 260.3 19.3 227 112-346 5-260 (261)
68 PTZ00426 cAMP-dependent protei 100.0 3.4E-33 7.3E-38 271.6 19.3 181 113-302 30-223 (340)
69 KOG0580 Serine/threonine prote 100.0 6.2E-34 1.4E-38 249.3 12.6 176 112-292 21-209 (281)
70 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.4E-33 5.2E-38 278.0 18.5 234 109-348 33-400 (401)
71 cd05631 STKc_GRK4 Catalytic do 100.0 3.4E-33 7.4E-38 264.8 18.5 216 114-336 1-249 (285)
72 cd05090 PTKc_Ror1 Catalytic do 100.0 5.5E-33 1.2E-37 262.8 19.9 228 113-346 5-282 (283)
73 cd08228 STKc_Nek6 Catalytic do 100.0 8.3E-33 1.8E-37 258.9 20.8 231 113-347 2-265 (267)
74 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.1E-33 9E-38 263.6 18.3 225 115-348 6-282 (283)
75 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.2E-33 6.9E-38 272.2 18.0 233 112-349 6-341 (343)
76 cd05111 PTK_HER3 Pseudokinase 100.0 7.5E-33 1.6E-37 261.6 20.0 230 113-351 7-272 (279)
77 cd05045 PTKc_RET Catalytic dom 100.0 7.3E-33 1.6E-37 263.0 20.0 229 114-348 1-287 (290)
78 KOG1025 Epidermal growth facto 100.0 3E-34 6.6E-39 286.9 10.8 226 115-349 698-959 (1177)
79 cd05072 PTKc_Lyn Catalytic dom 100.0 6E-33 1.3E-37 259.1 18.9 227 112-346 5-260 (261)
80 cd05585 STKc_YPK1_like Catalyt 100.0 2.8E-33 6.1E-38 268.9 16.9 217 121-344 1-245 (312)
81 KOG0588 Serine/threonine prote 100.0 8.4E-34 1.8E-38 278.9 13.1 224 113-343 12-263 (786)
82 cd05053 PTKc_FGFR Catalytic do 100.0 3.3E-33 7.1E-38 265.5 16.6 233 110-348 9-292 (293)
83 KOG0589 Serine/threonine prote 100.0 1.4E-33 3.1E-38 272.0 14.1 227 113-343 4-258 (426)
84 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7.2E-33 1.6E-37 258.3 18.3 224 113-345 4-256 (256)
85 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.3E-32 2.8E-37 259.4 20.1 218 120-345 2-274 (274)
86 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.9E-33 8.6E-38 270.3 16.9 222 113-343 1-257 (333)
87 cd07848 STKc_CDKL5 Catalytic d 100.0 7.5E-33 1.6E-37 262.2 18.3 261 113-386 1-287 (287)
88 cd05595 STKc_PKB_beta Catalyti 100.0 6.2E-33 1.3E-37 267.9 17.8 215 119-342 1-250 (323)
89 cd05035 PTKc_Axl_like Catalyti 100.0 1.2E-32 2.7E-37 258.2 19.2 228 115-347 1-272 (273)
90 cd05109 PTKc_HER2 Catalytic do 100.0 1.4E-32 3E-37 259.5 19.4 231 112-351 6-272 (279)
91 KOG4721 Serine/threonine prote 100.0 3.8E-34 8.3E-39 276.3 8.8 213 118-346 129-367 (904)
92 cd05097 PTKc_DDR_like Catalyti 100.0 1.4E-32 3.1E-37 261.6 19.6 228 113-346 5-295 (295)
93 PLN00034 mitogen-activated pro 100.0 4.6E-33 9.9E-38 272.1 16.5 218 113-343 74-328 (353)
94 cd05593 STKc_PKB_gamma Catalyt 100.0 8E-33 1.7E-37 267.7 18.0 216 119-343 1-251 (328)
95 cd05061 PTKc_InsR Catalytic do 100.0 1.2E-32 2.6E-37 261.4 18.7 231 111-347 4-278 (288)
96 cd05116 PTKc_Syk Catalytic dom 100.0 1.3E-32 2.9E-37 256.4 18.6 218 120-347 2-255 (257)
97 cd05094 PTKc_TrkC Catalytic do 100.0 1.4E-32 3E-37 261.3 18.9 232 113-350 5-285 (291)
98 cd05093 PTKc_TrkB Catalytic do 100.0 2.3E-32 5.1E-37 259.3 20.4 232 113-350 5-282 (288)
99 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.5E-32 5.5E-37 255.9 20.3 228 112-347 4-267 (268)
100 cd05043 PTK_Ryk Pseudokinase d 100.0 1.1E-32 2.4E-37 260.2 17.9 232 112-348 5-277 (280)
101 PHA03212 serine/threonine kina 100.0 2.3E-32 5E-37 270.5 21.0 263 112-390 91-383 (391)
102 cd05607 STKc_GRK7 Catalytic do 100.0 8.9E-33 1.9E-37 260.9 17.2 175 121-302 1-189 (277)
103 cd05049 PTKc_Trk Catalytic dom 100.0 1.6E-32 3.6E-37 258.7 18.9 228 113-346 5-280 (280)
104 cd05051 PTKc_DDR Catalytic dom 100.0 2.8E-32 6.1E-37 259.3 20.6 229 112-346 4-296 (296)
105 cd07862 STKc_CDK6 Catalytic do 100.0 1.1E-32 2.5E-37 261.4 17.7 264 113-386 1-290 (290)
106 cd05066 PTKc_EphR_A Catalytic 100.0 2.4E-32 5.2E-37 256.2 19.6 227 113-347 4-266 (267)
107 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.8E-32 8.3E-37 254.1 21.0 232 113-348 2-266 (267)
108 cd05089 PTKc_Tie1 Catalytic do 100.0 2.6E-32 5.6E-37 260.2 20.1 232 113-350 2-278 (297)
109 cd05059 PTKc_Tec_like Catalyti 100.0 1.7E-32 3.6E-37 255.6 18.4 223 113-344 4-255 (256)
110 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.5E-32 3.2E-37 262.7 18.5 235 112-350 14-299 (304)
111 cd05058 PTKc_Met_Ron Catalytic 100.0 2.6E-32 5.7E-37 254.8 19.7 223 119-348 1-260 (262)
112 cd05601 STKc_CRIK Catalytic do 100.0 9.6E-33 2.1E-37 267.2 17.3 149 113-267 1-154 (330)
113 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.5E-32 5.3E-37 264.8 20.2 267 114-393 1-300 (338)
114 cd05095 PTKc_DDR2 Catalytic do 100.0 2.4E-32 5.3E-37 260.2 19.8 229 112-346 4-296 (296)
115 PTZ00267 NIMA-related protein 100.0 3.3E-32 7.1E-37 276.4 21.9 223 114-342 68-322 (478)
116 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.1E-32 8.8E-37 254.3 20.7 219 119-345 1-262 (262)
117 cd05594 STKc_PKB_alpha Catalyt 100.0 2E-32 4.3E-37 264.6 19.1 218 119-343 1-252 (325)
118 cd05115 PTKc_Zap-70 Catalytic 100.0 3E-32 6.4E-37 254.4 19.5 219 120-347 2-255 (257)
119 cd05628 STKc_NDR1 Catalytic do 100.0 4.5E-32 9.8E-37 266.1 21.8 146 113-265 1-151 (363)
120 cd05091 PTKc_Ror2 Catalytic do 100.0 1.3E-32 2.7E-37 260.1 17.0 227 114-346 6-282 (283)
121 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.5E-32 5.4E-37 261.8 19.3 269 113-393 6-296 (309)
122 KOG0032 Ca2+/calmodulin-depend 100.0 2.3E-32 5E-37 266.3 19.3 174 111-292 33-225 (382)
123 cd05032 PTKc_InsR_like Catalyt 100.0 1.7E-32 3.7E-37 258.2 17.8 229 112-346 5-277 (277)
124 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 9E-33 2E-37 257.9 15.7 219 119-345 1-258 (258)
125 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.7E-32 5.8E-37 258.3 19.0 228 113-347 4-283 (284)
126 cd07853 STKc_NLK Catalytic dom 100.0 2.1E-32 4.5E-37 269.3 18.9 260 114-390 1-295 (372)
127 cd08229 STKc_Nek7 Catalytic do 100.0 2.5E-32 5.4E-37 255.7 18.5 229 113-347 2-265 (267)
128 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.8E-32 6.2E-37 257.2 19.0 229 111-345 4-276 (277)
129 cd05590 STKc_nPKC_eta Catalyti 100.0 3.4E-32 7.5E-37 262.4 19.8 167 119-292 1-183 (320)
130 cd05626 STKc_LATS2 Catalytic d 100.0 2.9E-32 6.3E-37 269.2 19.7 144 114-264 2-150 (381)
131 KOG0662 Cyclin-dependent kinas 100.0 6.1E-33 1.3E-37 233.4 12.6 261 114-389 3-289 (292)
132 cd05065 PTKc_EphR_B Catalytic 100.0 2.9E-32 6.4E-37 255.7 18.7 227 113-347 4-268 (269)
133 cd05088 PTKc_Tie2 Catalytic do 100.0 1.5E-32 3.2E-37 262.8 16.7 230 113-348 7-281 (303)
134 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.1E-32 6.8E-37 260.9 18.7 234 112-349 17-301 (307)
135 cd05050 PTKc_Musk Catalytic do 100.0 3.3E-32 7.1E-37 258.1 18.5 229 112-346 4-288 (288)
136 cd05092 PTKc_TrkA Catalytic do 100.0 5.4E-32 1.2E-36 255.8 19.9 228 113-346 5-280 (280)
137 cd05587 STKc_cPKC Catalytic do 100.0 8E-32 1.7E-36 260.2 21.5 215 114-337 1-246 (324)
138 cd05599 STKc_NDR_like Catalyti 100.0 2.5E-32 5.4E-37 267.9 17.9 146 113-265 1-151 (364)
139 cd05071 PTKc_Src Catalytic dom 100.0 5.5E-32 1.2E-36 253.2 19.4 227 112-347 5-260 (262)
140 cd05055 PTKc_PDGFR Catalytic d 100.0 5.2E-32 1.1E-36 258.9 19.6 229 112-347 34-301 (302)
141 cd05582 STKc_RSK_N N-terminal 100.0 1.4E-32 2.9E-37 264.9 15.6 214 119-339 2-245 (318)
142 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.6E-32 9.9E-37 253.1 18.7 227 113-346 6-259 (260)
143 cd06646 STKc_MAP4K5 Catalytic 100.0 5.3E-32 1.1E-36 253.6 19.1 224 112-344 8-266 (267)
144 cd05605 STKc_GRK4_like Catalyt 100.0 4.2E-32 9.1E-37 257.3 18.5 215 114-335 1-248 (285)
145 cd05060 PTKc_Syk_like Catalyti 100.0 5.7E-32 1.2E-36 252.1 18.9 220 119-348 1-256 (257)
146 cd05085 PTKc_Fer Catalytic dom 100.0 8.6E-32 1.9E-36 249.5 20.0 219 119-345 1-249 (250)
147 cd05069 PTKc_Yes Catalytic dom 100.0 1.1E-31 2.3E-36 250.8 20.5 225 113-346 6-259 (260)
148 cd05589 STKc_PKN Catalytic dom 100.0 5.3E-32 1.2E-36 261.5 18.8 218 115-342 1-256 (324)
149 cd05614 STKc_MSK2_N N-terminal 100.0 4.9E-32 1.1E-36 262.5 18.4 214 114-336 1-255 (332)
150 PTZ00283 serine/threonine prot 100.0 7.3E-32 1.6E-36 274.4 20.4 231 110-343 29-297 (496)
151 cd06615 PKc_MEK Catalytic doma 100.0 1.1E-31 2.3E-36 257.5 20.4 266 113-390 1-294 (308)
152 cd05100 PTKc_FGFR3 Catalytic d 100.0 5.7E-32 1.2E-36 262.3 18.8 233 113-351 12-297 (334)
153 cd05047 PTKc_Tie Catalytic dom 100.0 9E-32 2E-36 252.8 19.5 224 119-348 1-269 (270)
154 cd05042 PTKc_Aatyk Catalytic d 100.0 8.7E-32 1.9E-36 252.5 19.3 220 119-345 1-268 (269)
155 KOG0667 Dual-specificity tyros 100.0 2.5E-32 5.4E-37 269.8 16.3 266 114-388 187-507 (586)
156 cd05099 PTKc_FGFR4 Catalytic d 100.0 5E-32 1.1E-36 260.4 18.0 233 111-349 10-295 (314)
157 cd05083 PTKc_Chk Catalytic dom 100.0 6.3E-32 1.4E-36 251.3 18.0 224 113-346 6-253 (254)
158 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 8E-32 1.7E-36 254.2 19.0 228 113-347 4-283 (284)
159 cd05629 STKc_NDR_like_fungal C 100.0 5E-32 1.1E-36 267.1 18.3 145 113-264 1-150 (377)
160 cd06624 STKc_ASK Catalytic dom 100.0 1.7E-31 3.6E-36 250.5 20.9 229 108-342 3-264 (268)
161 KOG0599 Phosphorylase kinase g 100.0 3.8E-33 8.3E-38 248.5 9.1 225 111-342 15-282 (411)
162 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.4E-32 9.6E-37 264.5 17.6 148 113-267 1-153 (350)
163 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.3E-31 2.9E-36 250.0 19.9 226 112-346 5-259 (260)
164 cd05619 STKc_nPKC_theta Cataly 100.0 2E-31 4.3E-36 256.7 21.5 211 119-338 1-242 (316)
165 cd08529 STKc_FA2-like Catalyti 100.0 2.3E-31 4.9E-36 247.3 21.2 225 114-343 1-253 (256)
166 cd05621 STKc_ROCK2 Catalytic d 100.0 4.4E-32 9.5E-37 266.8 17.3 188 107-304 37-244 (370)
167 cd07861 STKc_CDK1_euk Catalyti 100.0 1.7E-31 3.6E-36 252.5 20.4 183 114-303 1-198 (285)
168 cd05046 PTK_CCK4 Pseudokinase 100.0 1.2E-31 2.6E-36 252.3 19.3 228 113-346 5-275 (275)
169 cd05608 STKc_GRK1 Catalytic do 100.0 8.2E-32 1.8E-36 254.7 18.3 210 121-336 1-245 (280)
170 cd05575 STKc_SGK Catalytic dom 100.0 7.1E-32 1.5E-36 260.5 18.2 214 119-339 1-243 (323)
171 cd05110 PTKc_HER4 Catalytic do 100.0 7.8E-32 1.7E-36 257.7 18.2 255 113-388 7-297 (303)
172 cd05584 STKc_p70S6K Catalytic 100.0 5.5E-32 1.2E-36 261.3 17.2 217 119-342 2-255 (323)
173 cd05591 STKc_nPKC_epsilon Cata 100.0 1.1E-31 2.3E-36 259.0 19.1 208 119-335 1-239 (321)
174 cd05034 PTKc_Src_like Catalyti 100.0 1.6E-31 3.4E-36 249.4 19.7 227 112-346 5-260 (261)
175 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.4E-31 2.9E-36 249.2 19.1 217 119-345 1-259 (259)
176 KOG0201 Serine/threonine prote 100.0 1.1E-33 2.5E-38 266.7 5.0 221 113-342 13-262 (467)
177 cd05588 STKc_aPKC Catalytic do 100.0 6E-32 1.3E-36 261.7 17.2 167 119-292 1-183 (329)
178 cd08219 STKc_Nek3 Catalytic do 100.0 3.7E-31 8.1E-36 246.1 21.7 225 114-343 1-252 (255)
179 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1E-31 2.2E-36 254.3 18.2 225 113-342 1-261 (286)
180 cd05598 STKc_LATS Catalytic do 100.0 6.1E-32 1.3E-36 266.4 17.2 145 113-264 1-150 (376)
181 PTZ00036 glycogen synthase kin 100.0 1.3E-31 2.9E-36 269.0 19.8 262 111-391 64-359 (440)
182 cd05616 STKc_cPKC_beta Catalyt 100.0 2.3E-31 5E-36 256.9 20.7 215 114-337 1-246 (323)
183 cd06625 STKc_MEKK3_like Cataly 100.0 1.9E-31 4.1E-36 249.0 19.5 222 113-343 2-260 (263)
184 cd05603 STKc_SGK2 Catalytic do 100.0 1.1E-31 2.5E-36 258.7 18.6 213 119-338 1-242 (321)
185 cd05592 STKc_nPKC_theta_delta 100.0 2.1E-31 4.6E-36 256.4 20.3 214 119-341 1-245 (316)
186 cd05596 STKc_ROCK Catalytic do 100.0 4.5E-32 9.8E-37 266.8 15.9 183 111-303 41-243 (370)
187 PTZ00284 protein kinase; Provi 100.0 1.5E-31 3.2E-36 271.0 20.2 273 106-391 122-446 (467)
188 cd05057 PTKc_EGFR_like Catalyt 100.0 3.2E-31 6.9E-36 250.2 21.1 228 113-349 7-270 (279)
189 cd05625 STKc_LATS1 Catalytic d 100.0 1E-31 2.2E-36 265.4 18.4 144 114-264 2-150 (382)
190 cd05570 STKc_PKC Catalytic dom 100.0 1.4E-31 3E-36 257.9 18.7 215 119-342 1-251 (318)
191 KOG0033 Ca2+/calmodulin-depend 100.0 5.7E-34 1.2E-38 250.2 1.9 246 112-388 10-272 (355)
192 cd08223 STKc_Nek4 Catalytic do 100.0 5.6E-31 1.2E-35 245.0 22.1 225 114-342 1-253 (257)
193 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.7E-31 8.1E-36 248.4 20.7 220 119-345 1-268 (269)
194 cd06654 STKc_PAK1 Catalytic do 100.0 1.9E-31 4.1E-36 254.3 18.8 221 112-342 19-269 (296)
195 cd06656 STKc_PAK3 Catalytic do 100.0 1.9E-31 4.2E-36 254.3 18.9 221 112-342 18-268 (297)
196 cd05620 STKc_nPKC_delta Cataly 100.0 2.3E-31 5E-36 256.2 19.4 211 119-338 1-242 (316)
197 cd06619 PKc_MKK5 Catalytic dom 100.0 2.6E-31 5.6E-36 251.0 19.3 217 113-342 1-252 (279)
198 cd00192 PTKc Catalytic domain 100.0 5.4E-31 1.2E-35 244.9 21.1 221 119-345 1-262 (262)
199 cd05041 PTKc_Fes_like Catalyti 100.0 3.6E-31 7.8E-36 245.5 19.9 220 119-346 1-251 (251)
200 cd05618 STKc_aPKC_iota Catalyt 100.0 1.6E-31 3.5E-36 258.7 18.3 167 119-292 1-183 (329)
201 KOG2345 Serine/threonine prote 100.0 2E-32 4.4E-37 240.9 10.5 231 112-347 20-300 (302)
202 KOG2052 Activin A type IB rece 100.0 1.2E-31 2.6E-36 253.1 16.5 230 112-350 210-506 (513)
203 cd05040 PTKc_Ack_like Catalyti 100.0 5E-31 1.1E-35 245.5 20.5 219 119-345 1-256 (257)
204 cd05615 STKc_cPKC_alpha Cataly 100.0 3.9E-31 8.5E-36 255.4 20.4 216 114-338 1-247 (323)
205 cd05056 PTKc_FAK Catalytic dom 100.0 2.3E-31 5.1E-36 249.8 18.2 227 113-348 6-266 (270)
206 PHA03211 serine/threonine kina 100.0 3.9E-31 8.4E-36 265.7 21.0 260 113-388 169-460 (461)
207 cd08221 STKc_Nek9 Catalytic do 100.0 6.2E-31 1.3E-35 244.7 20.9 225 114-343 1-253 (256)
208 PHA03209 serine/threonine kina 100.0 2.9E-31 6.4E-36 259.8 19.6 263 111-389 64-357 (357)
209 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.1E-31 4.6E-36 251.1 17.7 220 114-343 5-253 (277)
210 cd05627 STKc_NDR2 Catalytic do 100.0 2.3E-31 5.1E-36 260.7 18.6 146 113-265 1-151 (360)
211 KOG0199 ACK and related non-re 100.0 1.8E-32 3.9E-37 270.1 10.5 221 115-343 112-368 (1039)
212 cd07847 STKc_CDKL1_4 Catalytic 100.0 6.6E-31 1.4E-35 248.4 21.0 181 113-302 1-196 (286)
213 cd05073 PTKc_Hck Catalytic dom 100.0 7.1E-31 1.5E-35 245.2 20.7 226 112-346 5-259 (260)
214 cd06640 STKc_MST4 Catalytic do 100.0 8.6E-31 1.9E-35 247.1 21.4 221 113-343 4-253 (277)
215 cd05086 PTKc_Aatyk2 Catalytic 100.0 6.5E-31 1.4E-35 246.8 20.2 220 119-345 1-267 (268)
216 cd05112 PTKc_Itk Catalytic dom 100.0 5.2E-31 1.1E-35 245.2 19.4 224 113-345 4-256 (256)
217 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.4E-31 9.5E-36 255.4 19.6 167 119-292 1-183 (327)
218 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.2E-31 1.3E-35 247.0 20.0 228 115-347 1-272 (273)
219 cd06611 STKc_SLK_like Catalyti 100.0 2.4E-31 5.3E-36 251.0 17.3 223 112-342 4-261 (280)
220 cd06644 STKc_STK10_LOK Catalyt 100.0 9.4E-31 2E-35 248.7 21.4 222 113-342 12-268 (292)
221 PHA03207 serine/threonine kina 100.0 2.6E-31 5.6E-36 263.4 18.2 263 112-390 91-382 (392)
222 cd06613 STKc_MAP4K3_like Catal 100.0 6.7E-31 1.5E-35 245.0 19.9 223 112-342 2-259 (262)
223 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.3E-31 7.2E-36 257.8 18.5 268 110-390 12-305 (343)
224 cd06628 STKc_MAPKKK_Byr2_like 100.0 6.6E-31 1.4E-35 246.0 19.8 220 114-342 1-263 (267)
225 cd07841 STKc_CDK7 Catalytic do 100.0 6.1E-31 1.3E-35 250.5 19.7 221 114-343 1-282 (298)
226 cd06643 STKc_SLK Catalytic dom 100.0 7.8E-31 1.7E-35 247.9 20.2 220 115-342 7-261 (282)
227 cd06638 STKc_myosinIIIA Cataly 100.0 3.7E-31 8E-36 250.4 18.0 235 103-343 8-283 (286)
228 cd08217 STKc_Nek2 Catalytic do 100.0 7.3E-31 1.6E-35 244.6 19.6 228 114-343 1-262 (265)
229 cd07876 STKc_JNK2 Catalytic do 100.0 1.9E-30 4E-35 254.2 23.4 266 111-388 19-320 (359)
230 cd06637 STKc_TNIK Catalytic do 100.0 4.6E-31 1E-35 247.8 18.3 226 110-342 3-268 (272)
231 PRK13184 pknD serine/threonine 100.0 4.8E-31 1E-35 277.6 20.3 230 113-348 2-291 (932)
232 cd05604 STKc_SGK3 Catalytic do 100.0 1.8E-31 3.9E-36 257.9 15.6 219 119-344 1-248 (325)
233 cd05632 STKc_GRK5 Catalytic do 100.0 5.5E-31 1.2E-35 249.7 18.7 217 115-338 2-251 (285)
234 cd05044 PTKc_c-ros Catalytic d 100.0 4.1E-31 8.8E-36 247.7 17.5 222 119-346 1-269 (269)
235 cd06645 STKc_MAP4K3 Catalytic 100.0 4.8E-31 1E-35 247.1 17.9 221 113-342 9-264 (267)
236 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.5E-31 5.3E-36 251.7 15.7 224 113-344 5-267 (284)
237 KOG0694 Serine/threonine prote 100.0 2.6E-31 5.6E-36 263.1 16.3 218 111-336 366-612 (694)
238 cd05602 STKc_SGK1 Catalytic do 100.0 3.3E-31 7.2E-36 256.0 16.8 221 119-346 1-250 (325)
239 cd07875 STKc_JNK1 Catalytic do 100.0 2E-30 4.2E-35 254.5 22.4 263 111-388 22-323 (364)
240 cd05622 STKc_ROCK1 Catalytic d 100.0 6.3E-31 1.4E-35 258.7 18.9 191 105-305 35-245 (371)
241 cd07868 STKc_CDK8 Catalytic do 100.0 3.9E-31 8.5E-36 254.3 17.0 261 118-386 6-317 (317)
242 cd05574 STKc_phototropin_like 100.0 1.4E-30 3.1E-35 250.3 20.7 149 113-266 1-154 (316)
243 cd06612 STKc_MST1_2 Catalytic 100.0 1.2E-30 2.6E-35 242.4 19.5 221 112-342 2-252 (256)
244 cd08227 PK_STRAD_alpha Pseudok 100.0 1E-30 2.2E-35 252.8 19.5 142 117-263 2-149 (327)
245 cd05630 STKc_GRK6 Catalytic do 100.0 5.3E-31 1.1E-35 249.9 17.2 173 115-292 2-188 (285)
246 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2E-30 4.4E-35 247.6 21.3 265 113-392 6-295 (301)
247 cd06655 STKc_PAK2 Catalytic do 100.0 8.9E-31 1.9E-35 249.7 18.7 220 113-342 19-268 (296)
248 KOG0577 Serine/threonine prote 100.0 2.9E-32 6.2E-37 264.4 8.5 224 113-343 26-278 (948)
249 cd05597 STKc_DMPK_like Catalyt 100.0 1.8E-30 3.9E-35 251.6 21.1 183 113-303 1-204 (331)
250 cd07874 STKc_JNK3 Catalytic do 100.0 2.4E-31 5.2E-36 260.1 14.9 266 110-389 14-317 (355)
251 cd07846 STKc_CDKL2_3 Catalytic 100.0 4.5E-31 9.7E-36 249.7 16.3 173 113-292 1-188 (286)
252 cd06631 STKc_YSK4 Catalytic do 100.0 1.5E-30 3.3E-35 243.5 19.6 220 114-342 1-261 (265)
253 smart00219 TyrKc Tyrosine kina 100.0 9.1E-31 2E-35 243.2 18.0 223 115-344 1-258 (258)
254 cd08218 STKc_Nek1 Catalytic do 100.0 1.9E-30 4.1E-35 241.4 20.2 224 114-342 1-252 (256)
255 PF00069 Pkinase: Protein kina 100.0 2.7E-31 5.9E-36 247.2 14.2 219 115-342 1-256 (260)
256 KOG0666 Cyclin C-dependent kin 100.0 4.1E-32 8.8E-37 245.9 8.0 269 112-390 23-344 (438)
257 cd05609 STKc_MAST Catalytic do 100.0 2.1E-30 4.4E-35 248.1 20.2 225 113-346 1-273 (305)
258 cd07863 STKc_CDK4 Catalytic do 100.0 1.7E-30 3.6E-35 246.2 18.9 263 114-386 1-288 (288)
259 cd06607 STKc_TAO Catalytic dom 100.0 2.4E-30 5.1E-35 247.9 20.1 223 112-343 14-267 (307)
260 cd06641 STKc_MST3 Catalytic do 100.0 3.6E-30 7.9E-35 242.8 21.0 220 114-343 5-253 (277)
261 cd05580 STKc_PKA Catalytic dom 100.0 2E-30 4.3E-35 246.3 19.0 220 113-341 1-252 (290)
262 cd08528 STKc_Nek10 Catalytic d 100.0 3.4E-30 7.4E-35 241.6 20.4 227 114-345 1-268 (269)
263 cd06609 STKc_MST3_like Catalyt 100.0 2.1E-30 4.5E-35 243.8 18.9 220 113-342 1-250 (274)
264 cd05623 STKc_MRCK_alpha Cataly 100.0 2E-30 4.3E-35 251.4 19.3 184 113-304 1-205 (332)
265 cd06632 STKc_MEKK1_plant Catal 100.0 3.8E-30 8.2E-35 239.2 20.1 220 114-342 1-254 (258)
266 cd07839 STKc_CDK5 Catalytic do 100.0 6.1E-31 1.3E-35 248.6 15.0 261 114-386 1-284 (284)
267 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 4E-30 8.6E-35 243.9 20.6 225 113-342 1-265 (287)
268 cd06651 STKc_MEKK3 Catalytic d 100.0 3.5E-30 7.6E-35 241.3 20.0 148 113-266 2-157 (266)
269 cd06639 STKc_myosinIIIB Cataly 100.0 2.3E-30 5E-35 245.8 18.5 234 103-342 12-286 (291)
270 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.2E-30 9.1E-35 240.1 20.0 224 113-342 1-263 (267)
271 PTZ00266 NIMA-related protein 100.0 2E-30 4.2E-35 274.1 19.7 232 109-342 9-294 (1021)
272 cd07860 STKc_CDK2_3 Catalytic 100.0 2.5E-30 5.5E-35 244.4 18.6 262 114-386 1-284 (284)
273 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5E-30 1.1E-34 243.5 20.7 264 111-386 3-291 (291)
274 KOG0586 Serine/threonine prote 100.0 7.4E-31 1.6E-35 257.1 14.9 225 110-343 53-306 (596)
275 cd08220 STKc_Nek8 Catalytic do 100.0 4.8E-30 1E-34 238.4 19.7 224 114-342 1-252 (256)
276 cd07832 STKc_CCRK Catalytic do 100.0 2.8E-30 6.1E-35 244.1 18.2 262 114-387 1-286 (286)
277 cd07833 STKc_CDKL Catalytic do 100.0 2.1E-30 4.5E-35 245.2 17.3 173 113-292 1-189 (288)
278 cd06630 STKc_MEKK1 Catalytic d 100.0 2.8E-30 6E-35 241.8 17.9 220 114-342 1-263 (268)
279 cd06658 STKc_PAK5 Catalytic do 100.0 1.2E-30 2.7E-35 248.3 15.6 219 115-343 24-272 (292)
280 cd07844 STKc_PCTAIRE_like Cata 100.0 4.2E-30 9.1E-35 243.9 19.1 263 113-386 5-291 (291)
281 KOG4279 Serine/threonine prote 100.0 3.1E-30 6.7E-35 254.1 18.5 219 119-343 581-832 (1226)
282 KOG0574 STE20-like serine/thre 100.0 1E-32 2.2E-37 248.6 1.1 219 114-342 34-282 (502)
283 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.7E-30 5.8E-35 244.1 17.6 234 102-342 5-278 (282)
284 cd06623 PKc_MAPKK_plant_like C 100.0 5.6E-30 1.2E-34 238.9 19.5 221 113-342 1-255 (264)
285 cd07836 STKc_Pho85 Catalytic d 100.0 7.2E-30 1.6E-34 241.2 20.3 262 114-386 1-284 (284)
286 KOG0610 Putative serine/threon 100.0 1.4E-30 3E-35 244.2 15.1 148 113-265 77-229 (459)
287 cd06605 PKc_MAPKK Catalytic do 100.0 3E-30 6.5E-35 241.2 17.2 224 113-342 1-256 (265)
288 cd06652 STKc_MEKK2 Catalytic d 100.0 7.2E-30 1.6E-34 239.0 19.6 221 113-342 2-260 (265)
289 cd06626 STKc_MEKK4 Catalytic d 100.0 7E-30 1.5E-34 238.4 19.2 220 114-342 1-260 (264)
290 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.9E-30 8.4E-35 242.9 17.4 223 113-342 1-260 (283)
291 cd05624 STKc_MRCK_beta Catalyt 100.0 7.1E-30 1.5E-34 247.4 19.6 149 113-267 1-154 (331)
292 cd07842 STKc_CDK8_like Catalyt 100.0 5.3E-30 1.2E-34 245.8 18.4 267 114-386 1-316 (316)
293 cd05586 STKc_Sck1_like Catalyt 100.0 3.5E-30 7.6E-35 249.3 17.3 215 121-342 1-252 (330)
294 cd06917 STKc_NAK1_like Catalyt 100.0 8E-30 1.7E-34 240.1 19.0 219 114-342 2-254 (277)
295 cd07867 STKc_CDC2L6 Catalytic 100.0 1.2E-29 2.5E-34 243.8 20.4 261 118-386 6-317 (317)
296 cd06659 STKc_PAK6 Catalytic do 100.0 4.4E-30 9.6E-35 245.0 16.9 217 117-343 25-271 (297)
297 cd07837 STKc_CdkB_plant Cataly 100.0 7.3E-30 1.6E-34 242.6 18.2 260 113-387 1-295 (295)
298 KOG1035 eIF-2alpha kinase GCN2 100.0 5E-31 1.1E-35 273.9 11.0 227 110-342 476-870 (1351)
299 KOG0579 Ste20-like serine/thre 100.0 3.2E-31 6.9E-36 258.7 8.9 224 113-342 32-288 (1187)
300 cd06608 STKc_myosinIII_like Ca 100.0 5.5E-30 1.2E-34 240.2 16.9 227 110-342 3-271 (275)
301 cd06647 STKc_PAK_I Catalytic d 100.0 9.2E-30 2E-34 242.3 18.6 233 112-354 18-282 (293)
302 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.1E-29 2.3E-34 238.6 18.6 220 114-342 2-268 (272)
303 cd06627 STKc_Cdc7_like Catalyt 100.0 1.9E-29 4.2E-34 233.7 19.8 220 114-342 1-250 (254)
304 cd08225 STKc_Nek5 Catalytic do 100.0 8.9E-30 1.9E-34 236.7 17.6 222 114-342 1-253 (257)
305 KOG0584 Serine/threonine prote 100.0 1.8E-30 3.9E-35 254.8 13.2 221 116-343 43-296 (632)
306 cd07864 STKc_CDK12 Catalytic d 100.0 8E-30 1.7E-34 243.1 17.4 265 110-386 4-302 (302)
307 KOG0200 Fibroblast/platelet-de 100.0 4.5E-30 9.8E-35 266.4 16.5 235 108-347 291-579 (609)
308 PHA03210 serine/threonine kina 100.0 7.9E-30 1.7E-34 260.1 18.0 270 110-390 145-461 (501)
309 cd05122 PKc_STE Catalytic doma 100.0 3E-29 6.5E-34 231.5 20.2 221 114-342 1-250 (253)
310 cd07843 STKc_CDC2L1 Catalytic 100.0 9E-30 1.9E-34 242.0 17.0 263 113-386 5-293 (293)
311 cd06635 STKc_TAO1 Catalytic do 100.0 3.4E-29 7.3E-34 241.1 21.1 228 114-350 26-284 (317)
312 KOG4717 Serine/threonine prote 100.0 6.7E-30 1.5E-34 244.6 15.4 226 112-347 17-276 (864)
313 cd05578 STKc_Yank1 Catalytic d 100.0 4.9E-30 1.1E-34 239.0 14.3 147 114-267 1-152 (258)
314 cd05579 STKc_MAST_like Catalyt 100.0 9.8E-30 2.1E-34 237.0 15.8 139 121-266 1-144 (265)
315 cd07849 STKc_ERK1_2_like Catal 100.0 1.5E-29 3.3E-34 245.5 17.5 147 112-266 4-157 (336)
316 cd07835 STKc_CDK1_like Catalyt 100.0 2.9E-29 6.3E-34 237.0 18.9 181 115-303 1-196 (283)
317 cd05572 STKc_cGK_PKG Catalytic 100.0 3.4E-29 7.3E-34 233.9 19.1 165 121-292 1-179 (262)
318 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.4E-29 2.9E-34 245.2 16.9 178 107-292 4-193 (328)
319 cd06648 STKc_PAK_II Catalytic 100.0 2.6E-29 5.6E-34 238.2 18.4 219 114-342 20-268 (285)
320 cd06606 STKc_MAPKKK Catalytic 100.0 4.4E-29 9.5E-34 231.3 19.3 220 114-342 1-256 (260)
321 cd07831 STKc_MOK Catalytic dom 100.0 6.7E-29 1.5E-33 234.1 20.5 171 115-292 1-186 (282)
322 cd07845 STKc_CDK10 Catalytic d 100.0 3.7E-29 7.9E-34 239.8 18.5 267 112-390 6-297 (309)
323 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.6E-29 3.4E-34 245.5 16.2 227 112-347 4-297 (337)
324 cd05577 STKc_GRK Catalytic dom 100.0 4.2E-29 9.1E-34 235.5 18.6 212 121-339 1-245 (277)
325 cd06614 STKc_PAK Catalytic dom 100.0 6.1E-29 1.3E-33 235.4 19.7 224 110-342 16-269 (286)
326 cd07850 STKc_JNK Catalytic dom 100.0 1.2E-28 2.6E-33 240.9 22.2 266 111-387 14-315 (353)
327 cd05581 STKc_PDK1 Catalytic do 100.0 2.4E-29 5.1E-34 236.7 16.2 148 113-267 1-154 (280)
328 cd07852 STKc_MAPK15 Catalytic 100.0 3.1E-29 6.7E-34 243.4 17.5 148 111-266 5-158 (337)
329 cd06657 STKc_PAK4 Catalytic do 100.0 4.2E-29 9.2E-34 237.7 17.6 215 118-342 25-269 (292)
330 cd08530 STKc_CNK2-like Catalyt 100.0 4.7E-29 1E-33 231.5 17.4 225 114-342 1-252 (256)
331 cd05611 STKc_Rim15_like Cataly 100.0 4.2E-29 9E-34 233.0 17.0 167 119-292 2-180 (260)
332 cd08215 STKc_Nek Catalytic dom 100.0 1.2E-28 2.6E-33 228.6 19.9 225 114-342 1-254 (258)
333 cd07830 STKc_MAK_like Catalyti 100.0 5.6E-29 1.2E-33 234.9 18.0 147 115-267 1-151 (283)
334 cd05633 STKc_GRK3 Catalytic do 100.0 8.2E-29 1.8E-33 234.1 18.9 166 120-292 1-183 (279)
335 cd07855 STKc_ERK5 Catalytic do 100.0 1.6E-29 3.4E-34 245.2 14.2 148 112-266 4-158 (334)
336 PHA03390 pk1 serine/threonine- 100.0 1.5E-28 3.3E-33 230.8 20.2 248 106-388 7-267 (267)
337 cd07834 STKc_MAPK Catalytic do 100.0 3.4E-29 7.3E-34 242.2 16.2 278 114-404 1-310 (330)
338 cd07865 STKc_CDK9 Catalytic do 100.0 9.6E-29 2.1E-33 236.3 19.1 262 112-386 11-310 (310)
339 cd08226 PK_STRAD_beta Pseudoki 100.0 1.1E-28 2.4E-33 238.6 19.7 139 119-262 4-148 (328)
340 cd07840 STKc_CDK9_like Catalyt 100.0 7.9E-29 1.7E-33 234.0 18.2 260 115-386 1-287 (287)
341 cd06616 PKc_MKK4 Catalytic dom 100.0 3.3E-29 7.2E-34 237.4 15.6 222 114-342 5-266 (288)
342 cd05583 STKc_MSK_N N-terminal 100.0 6.4E-29 1.4E-33 235.5 17.3 223 114-345 1-265 (288)
343 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.3E-28 2.9E-33 239.9 19.8 278 101-391 5-308 (345)
344 cd08216 PK_STRAD Pseudokinase 100.0 9.4E-29 2E-33 237.3 18.3 144 117-265 6-151 (314)
345 PLN00009 cyclin-dependent kina 100.0 2E-28 4.4E-33 232.8 20.4 267 113-391 2-292 (294)
346 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.4E-28 2.9E-33 239.6 19.5 270 111-394 13-309 (343)
347 cd06633 STKc_TAO3 Catalytic do 100.0 3.7E-28 8.1E-33 233.5 21.4 220 115-343 23-273 (313)
348 cd05613 STKc_MSK1_N N-terminal 100.0 1.4E-28 3.1E-33 233.4 18.1 147 114-267 1-157 (290)
349 cd06634 STKc_TAO2 Catalytic do 100.0 1.6E-28 3.4E-33 235.5 18.5 223 113-344 15-268 (308)
350 cd07879 STKc_p38delta_MAPK13 C 100.0 2.9E-28 6.4E-33 237.1 20.2 227 112-349 14-305 (342)
351 cd05118 STKc_CMGC Catalytic do 100.0 1.6E-28 3.5E-33 231.5 17.6 171 115-292 1-186 (283)
352 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.1E-28 6.6E-33 227.9 18.9 221 113-342 2-260 (264)
353 PTZ00024 cyclin-dependent prot 100.0 1.2E-28 2.6E-33 239.0 16.7 269 113-394 8-324 (335)
354 cd07838 STKc_CDK4_6_like Catal 100.0 3.5E-28 7.6E-33 229.7 19.3 147 115-267 1-159 (287)
355 KOG4250 TANK binding protein k 100.0 1.4E-29 2.9E-34 251.5 9.8 189 115-308 15-225 (732)
356 cd06618 PKc_MKK7 Catalytic dom 100.0 1.8E-28 3.8E-33 233.6 17.2 223 113-343 15-273 (296)
357 PHA02882 putative serine/threo 100.0 3.9E-28 8.5E-33 231.3 18.3 225 112-345 11-294 (294)
358 cd07851 STKc_p38 Catalytic dom 100.0 1.2E-28 2.6E-33 240.0 14.3 184 110-303 12-212 (343)
359 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.9E-28 6.2E-33 237.2 16.4 264 113-389 5-306 (342)
360 cd07866 STKc_BUR1 Catalytic do 100.0 2.6E-28 5.7E-33 233.4 15.8 264 112-386 7-311 (311)
361 cd08222 STKc_Nek11 Catalytic d 100.0 4.3E-28 9.3E-33 226.2 16.7 224 114-342 1-256 (260)
362 KOG0607 MAP kinase-interacting 100.0 6.3E-29 1.4E-33 225.9 10.4 263 103-394 73-372 (463)
363 cd05123 STKc_AGC Catalytic dom 100.0 7.5E-28 1.6E-32 222.8 17.5 210 121-339 1-240 (250)
364 cd05606 STKc_beta_ARK Catalyti 100.0 8.5E-28 1.8E-32 227.0 18.2 166 120-292 1-183 (278)
365 cd07829 STKc_CDK_like Catalyti 100.0 4E-28 8.7E-33 228.7 15.7 146 115-267 1-150 (282)
366 KOG1024 Receptor-like protein 100.0 1.9E-28 4E-33 228.1 12.6 238 105-347 276-555 (563)
367 KOG0669 Cyclin T-dependent kin 100.0 4.2E-30 9.1E-35 226.7 0.9 265 113-390 17-322 (376)
368 cd07857 STKc_MPK1 Catalytic do 100.0 2.3E-27 4.9E-32 229.9 19.5 146 114-266 1-156 (332)
369 PLN03224 probable serine/threo 100.0 1E-27 2.3E-32 241.3 16.5 153 111-266 143-360 (507)
370 KOG0986 G protein-coupled rece 100.0 2.3E-28 4.9E-33 231.3 9.9 251 112-391 184-454 (591)
371 PLN03225 Serine/threonine-prot 100.0 2.8E-27 6.1E-32 243.4 18.7 260 111-392 130-459 (566)
372 KOG0612 Rho-associated, coiled 99.9 1.9E-28 4.1E-33 253.1 9.3 252 104-390 66-345 (1317)
373 KOG0983 Mitogen-activated prot 99.9 4.2E-28 9.2E-33 216.4 10.2 222 116-343 95-349 (391)
374 KOG0596 Dual specificity; seri 99.9 9E-28 2E-32 232.1 12.7 221 113-343 361-627 (677)
375 KOG4236 Serine/threonine prote 99.9 1.3E-27 2.8E-32 229.5 13.3 218 118-341 569-817 (888)
376 KOG1006 Mitogen-activated prot 99.9 1.1E-28 2.4E-33 219.3 4.6 223 116-343 67-327 (361)
377 KOG0587 Traf2- and Nck-interac 99.9 4.3E-27 9.4E-32 238.0 16.7 236 103-343 9-282 (953)
378 KOG4645 MAPKKK (MAP kinase kin 99.9 2.1E-28 4.5E-33 255.7 7.4 226 111-343 1233-1494(1509)
379 cd05576 STKc_RPK118_like Catal 99.9 4.3E-27 9.2E-32 217.0 14.6 200 124-337 4-223 (237)
380 KOG0604 MAP kinase-activated p 99.9 6.2E-28 1.3E-32 217.8 7.9 233 111-352 59-333 (400)
381 KOG0690 Serine/threonine prote 99.9 7E-28 1.5E-32 219.5 6.5 245 112-390 167-431 (516)
382 KOG0671 LAMMER dual specificit 99.9 6.2E-27 1.3E-31 217.8 12.5 269 111-390 87-413 (415)
383 KOG0664 Nemo-like MAPK-related 99.9 6.4E-28 1.4E-32 215.2 5.0 261 115-393 55-353 (449)
384 KOG1151 Tousled-like protein k 99.9 8E-27 1.7E-31 220.1 8.3 222 114-342 464-740 (775)
385 smart00220 S_TKc Serine/Threon 99.9 1.8E-25 3.9E-30 204.7 17.1 211 125-342 1-240 (244)
386 cd00180 PKc Catalytic domain o 99.9 7.3E-25 1.6E-29 195.5 20.0 199 121-343 1-214 (215)
387 KOG0984 Mitogen-activated prot 99.9 2.7E-26 5.8E-31 197.3 9.7 181 108-292 41-239 (282)
388 KOG0668 Casein kinase II, alph 99.9 7.9E-27 1.7E-31 203.5 6.4 269 112-395 37-334 (338)
389 cd05610 STKc_MASTL Catalytic d 99.9 3.2E-25 6.8E-30 233.3 16.5 147 113-266 4-155 (669)
390 KOG0576 Mitogen-activated prot 99.9 1.3E-26 2.7E-31 228.3 4.4 251 110-371 12-295 (829)
391 KOG0608 Warts/lats-like serine 99.9 1.4E-25 3.1E-30 219.5 10.5 154 104-264 617-778 (1034)
392 KOG0603 Ribosomal protein S6 k 99.9 1.6E-25 3.4E-30 220.9 10.7 217 112-342 321-562 (612)
393 KOG0670 U4/U6-associated splic 99.9 6.2E-26 1.3E-30 217.8 7.3 268 112-388 431-751 (752)
394 KOG0665 Jun-N-terminal kinase 99.9 2.8E-25 6E-30 202.5 9.3 263 112-387 16-314 (369)
395 KOG1027 Serine/threonine prote 99.9 1.4E-24 3E-29 219.0 12.7 217 115-341 511-765 (903)
396 PRK09188 serine/threonine prot 99.9 4.3E-24 9.3E-29 206.7 15.2 142 109-267 14-164 (365)
397 KOG0696 Serine/threonine prote 99.9 4E-24 8.6E-29 200.5 8.9 216 112-334 348-592 (683)
398 KOG1167 Serine/threonine prote 99.9 6.3E-24 1.4E-28 200.2 9.1 270 107-390 30-388 (418)
399 cd05147 RIO1_euk RIO kinase fa 99.9 1.5E-23 3.2E-28 186.6 10.6 140 118-266 2-168 (190)
400 KOG0614 cGMP-dependent protein 99.9 1.7E-24 3.6E-29 207.5 3.7 214 113-335 420-664 (732)
401 KOG1152 Signal transduction se 99.9 3.2E-23 6.8E-28 201.5 9.8 173 113-292 561-756 (772)
402 cd05145 RIO1_like RIO kinase f 99.9 2.7E-22 5.9E-27 178.8 13.4 139 118-267 2-169 (190)
403 KOG1290 Serine/threonine prote 99.9 2.3E-21 4.9E-26 185.5 17.7 133 112-249 77-222 (590)
404 KOG1345 Serine/threonine kinas 99.9 3.3E-22 7.2E-27 178.6 10.9 147 112-266 23-174 (378)
405 smart00221 STYKc Protein kinas 99.9 4.6E-21 9.9E-26 173.9 17.8 148 115-268 1-151 (225)
406 PRK10345 hypothetical protein; 99.9 9.9E-22 2.2E-26 176.8 13.0 138 115-262 4-156 (210)
407 KOG0695 Serine/threonine prote 99.9 1.2E-21 2.6E-26 179.6 9.3 174 112-292 249-438 (593)
408 PRK14879 serine/threonine prot 99.8 7.2E-20 1.6E-24 165.7 13.0 134 119-264 2-143 (211)
409 PRK09605 bifunctional UGMP fam 99.8 1.1E-19 2.3E-24 187.1 15.2 139 111-265 331-477 (535)
410 PRK10359 lipopolysaccharide co 99.8 9.8E-20 2.1E-24 164.7 12.4 163 111-293 29-210 (232)
411 smart00090 RIO RIO-like kinase 99.8 7.3E-20 1.6E-24 168.4 11.7 141 114-266 29-199 (237)
412 PRK12274 serine/threonine prot 99.8 3.4E-19 7.4E-24 158.0 13.9 133 116-266 5-143 (218)
413 TIGR03724 arch_bud32 Kae1-asso 99.8 1.4E-19 3E-24 162.3 11.5 131 120-265 1-139 (199)
414 cd05144 RIO2_C RIO kinase fami 99.8 3.7E-19 8.1E-24 159.6 13.0 143 107-266 9-176 (198)
415 KOG0195 Integrin-linked kinase 99.8 4.1E-20 9E-25 165.3 4.1 222 118-347 195-446 (448)
416 PLN00181 protein SPA1-RELATED; 99.8 1.8E-19 3.8E-24 194.0 8.7 171 164-342 28-264 (793)
417 KOG1164 Casein kinase (serine/ 99.8 7.6E-18 1.6E-22 162.6 15.6 145 114-263 19-175 (322)
418 cd05120 APH_ChoK_like Aminogly 99.7 1.5E-17 3.2E-22 141.1 12.4 136 117-265 2-139 (155)
419 PRK01723 3-deoxy-D-manno-octul 99.7 2.1E-17 4.5E-22 152.4 13.9 137 118-265 36-192 (239)
420 KOG1163 Casein kinase (serine/ 99.7 5E-17 1.1E-21 143.4 15.1 147 112-267 14-166 (341)
421 cd05119 RIO RIO kinase family, 99.7 2.3E-17 5.1E-22 146.3 11.2 135 118-266 2-165 (187)
422 KOG1165 Casein kinase (serine/ 99.7 5.2E-17 1.1E-21 149.4 11.0 147 113-268 28-182 (449)
423 KOG0590 Checkpoint kinase and 99.7 4.9E-18 1.1E-22 174.9 4.1 169 116-292 321-512 (601)
424 COG0515 SPS1 Serine/threonine 99.7 5.3E-16 1.1E-20 146.9 15.4 224 115-343 2-275 (384)
425 KOG1023 Natriuretic peptide re 99.6 1.6E-15 3.5E-20 150.1 11.3 184 162-350 1-227 (484)
426 KOG1166 Mitotic checkpoint ser 99.6 1.6E-15 3.4E-20 160.1 11.5 146 109-264 694-850 (974)
427 TIGR01982 UbiB 2-polyprenylphe 99.6 3.1E-15 6.7E-20 149.5 12.1 142 118-267 122-309 (437)
428 smart00750 KIND kinase non-cat 99.6 7.5E-15 1.6E-19 128.7 12.3 137 194-346 1-168 (176)
429 KOG4158 BRPK/PTEN-induced prot 99.6 3.5E-15 7.7E-20 140.3 9.9 172 166-345 274-512 (598)
430 PF14531 Kinase-like: Kinase-l 99.5 4.3E-13 9.2E-18 125.2 14.8 213 115-334 14-288 (288)
431 cd05151 ChoK Choline Kinase (C 99.5 1.2E-13 2.7E-18 120.1 9.3 128 118-264 3-136 (170)
432 PRK04750 ubiB putative ubiquin 99.5 4.3E-13 9.2E-18 136.0 12.9 145 113-268 120-317 (537)
433 KOG1240 Protein kinase contain 99.4 4.9E-14 1.1E-18 146.9 5.0 223 114-346 24-294 (1431)
434 KOG0603 Ribosomal protein S6 k 99.4 2.1E-14 4.5E-19 142.7 1.9 211 120-337 1-232 (612)
435 cd05146 RIO3_euk RIO kinase fa 99.3 1E-11 2.2E-16 110.1 11.9 135 119-266 3-175 (197)
436 KOG1033 eIF-2alpha kinase PEK/ 99.3 1.8E-13 3.8E-18 133.6 0.7 150 183-340 330-509 (516)
437 COG3642 Mn2+-dependent serine/ 99.3 3.3E-11 7.1E-16 103.7 11.8 133 119-266 2-142 (204)
438 KOG3087 Serine/threonine prote 99.3 6.6E-11 1.4E-15 101.5 13.0 144 117-265 11-166 (229)
439 cd05154 ACAD10_11_like Acyl-Co 99.3 3.9E-11 8.4E-16 108.9 11.8 143 119-265 4-207 (223)
440 PRK15123 lipopolysaccharide co 99.1 1.9E-09 4E-14 100.8 15.8 142 119-264 28-194 (268)
441 KOG0606 Microtubule-associated 99.1 1.6E-10 3.5E-15 120.9 7.9 180 112-335 82-304 (1205)
442 KOG0590 Checkpoint kinase and 99.1 1.2E-11 2.6E-16 127.8 -2.3 152 112-267 19-177 (601)
443 KOG0601 Cyclin-dependent kinas 99.0 2.1E-10 4.5E-15 114.2 5.1 222 113-342 114-378 (524)
444 PF01163 RIO1: RIO1 family; I 99.0 2.6E-09 5.7E-14 94.3 10.8 125 128-266 1-157 (188)
445 KOG1266 Protein kinase [Signal 98.9 1.1E-09 2.3E-14 101.6 5.3 97 161-258 120-221 (458)
446 KOG1243 Protein kinase [Genera 98.9 2.3E-08 5E-13 100.9 14.6 120 136-266 37-156 (690)
447 KOG0601 Cyclin-dependent kinas 98.9 1.2E-09 2.7E-14 108.7 4.0 148 110-264 262-416 (524)
448 KOG3741 Poly(A) ribonuclease s 98.9 3.8E-08 8.2E-13 96.6 13.3 141 125-268 288-446 (655)
449 PF06293 Kdo: Lipopolysacchari 98.8 4.8E-08 1E-12 88.1 10.8 107 153-265 56-171 (206)
450 PRK09902 hypothetical protein; 98.7 2.2E-07 4.8E-12 82.8 13.3 140 120-264 25-179 (216)
451 COG0478 RIO-like serine/threon 98.7 6E-08 1.3E-12 88.6 9.8 132 115-262 93-249 (304)
452 COG0661 AarF Predicted unusual 98.6 3.6E-07 7.7E-12 92.6 11.9 141 119-268 131-318 (517)
453 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 1.7E-06 3.7E-11 79.1 13.1 139 119-264 7-182 (226)
454 PF01636 APH: Phosphotransfera 98.5 4.2E-06 9.1E-11 76.1 14.0 145 118-264 2-197 (239)
455 PF12260 PIP49_C: Protein-kina 98.4 7.9E-07 1.7E-11 78.8 8.2 105 157-266 8-113 (188)
456 PF06176 WaaY: Lipopolysacchar 98.4 5.7E-06 1.2E-10 74.2 13.1 139 111-264 29-183 (229)
457 COG1718 RIO1 Serine/threonine 98.4 4.5E-06 9.8E-11 75.7 12.0 153 102-266 34-217 (268)
458 COG2112 Predicted Ser/Thr prot 98.3 3E-06 6.6E-11 72.8 9.1 130 116-266 25-157 (201)
459 cd05150 APH Aminoglycoside 3'- 98.3 9E-06 1.9E-10 75.1 12.4 140 121-264 6-193 (244)
460 PF13095 FTA2: Kinetochore Sim 98.3 9.2E-06 2E-10 72.0 11.3 126 113-262 37-206 (207)
461 KOG1235 Predicted unusual prot 98.2 5.9E-06 1.3E-10 83.6 10.4 142 119-267 167-357 (538)
462 PLN02876 acyl-CoA dehydrogenas 98.2 1.9E-05 4E-10 85.8 14.2 78 118-195 43-130 (822)
463 PRK10593 hypothetical protein; 98.0 9.2E-05 2E-09 70.6 12.9 79 116-196 17-100 (297)
464 PF10707 YrbL-PhoP_reg: PhoP r 98.0 0.00013 2.8E-09 65.1 12.9 134 116-262 4-170 (199)
465 KOG0606 Microtubule-associated 97.9 4.1E-06 8.8E-11 88.7 2.6 271 112-392 803-1101(1205)
466 cd05155 APH_ChoK_like_1 Unchar 97.9 9E-05 2E-09 68.1 10.5 74 119-197 3-82 (235)
467 TIGR02721 ycfN_thiK thiamine k 97.8 0.00012 2.6E-09 68.2 9.6 139 121-265 4-176 (256)
468 PRK09550 mtnK methylthioribose 97.7 0.00066 1.4E-08 67.0 12.9 75 118-195 31-117 (401)
469 cd05157 ETNK_euk Ethanolamine 97.6 0.00051 1.1E-08 62.9 11.2 140 119-264 4-201 (235)
470 PRK05231 homoserine kinase; Pr 97.6 0.0012 2.6E-08 63.6 13.6 158 104-264 8-217 (319)
471 cd05153 HomoserineK_II Homoser 97.6 0.0007 1.5E-08 64.3 11.7 144 118-264 19-205 (296)
472 TIGR00938 thrB_alt homoserine 97.4 0.0028 6.1E-08 60.6 13.1 145 118-264 27-217 (307)
473 cd05156 ChoK_euk Choline Kinas 97.3 0.0016 3.5E-08 62.1 10.1 141 119-265 4-214 (302)
474 COG3173 Predicted aminoglycosi 97.1 0.0054 1.2E-07 58.6 11.4 131 127-266 39-230 (321)
475 cd05152 MPH2' Macrolide 2'-Pho 97.0 0.0094 2E-07 56.2 11.6 32 234-265 185-217 (276)
476 cd05610 STKc_MASTL Catalytic d 96.9 0.0017 3.7E-08 69.1 6.8 64 237-302 499-575 (669)
477 PLN02236 choline kinase 96.9 0.0082 1.8E-07 58.5 10.5 140 119-264 42-231 (344)
478 KOG2268 Serine/threonine prote 96.8 0.0016 3.5E-08 61.5 4.7 129 115-260 94-247 (465)
479 PLN02756 S-methyl-5-thioribose 96.8 0.031 6.8E-07 55.2 13.6 80 118-200 37-128 (418)
480 KOG2137 Protein kinase [Signal 96.7 0.0014 3.1E-08 67.3 3.8 47 219-267 106-152 (700)
481 TIGR01767 MTRK 5-methylthiorib 96.6 0.025 5.5E-07 54.9 11.4 79 119-200 1-92 (370)
482 KOG2270 Serine/threonine prote 96.6 0.013 2.8E-07 56.6 9.0 142 117-268 148-317 (520)
483 PF03881 Fructosamin_kin: Fruc 96.6 0.018 3.9E-07 54.5 10.1 75 116-194 20-97 (288)
484 PF07387 Seadorna_VP7: Seadorn 96.5 0.017 3.6E-07 52.0 8.6 116 125-262 74-190 (308)
485 KOG1035 eIF-2alpha kinase GCN2 96.5 0.0094 2E-07 64.9 8.2 187 152-344 226-435 (1351)
486 KOG0576 Mitogen-activated prot 96.3 0.00042 9.1E-09 70.5 -2.4 135 118-268 247-384 (829)
487 TIGR02906 spore_CotS spore coa 96.3 0.075 1.6E-06 50.7 13.2 31 233-264 186-216 (313)
488 TIGR02904 spore_ysxE spore coa 96.1 0.064 1.4E-06 51.4 11.3 32 233-264 195-226 (309)
489 PLN02421 phosphotransferase, a 95.9 0.039 8.4E-07 53.5 9.0 141 119-265 20-214 (330)
490 COG4248 Uncharacterized protei 95.9 0.19 4.2E-06 49.4 13.3 137 117-260 15-162 (637)
491 COG3001 Uncharacterized protei 95.7 0.21 4.5E-06 45.4 11.8 75 119-197 22-99 (286)
492 PRK12396 5-methylribose kinase 95.7 0.046 9.9E-07 53.8 8.4 80 118-200 34-125 (409)
493 COG5072 ALK1 Serine/threonine 95.5 0.061 1.3E-06 51.9 8.2 76 181-267 298-373 (488)
494 COG2334 Putative homoserine ki 95.5 0.12 2.6E-06 49.9 10.3 141 120-264 33-228 (331)
495 KOG1236 Predicted unusual prot 95.3 0.05 1.1E-06 53.3 6.8 62 183-250 319-380 (565)
496 PRK06148 hypothetical protein; 95.1 0.49 1.1E-05 52.9 14.9 142 119-264 31-236 (1013)
497 PRK11768 serine/threonine prot 94.7 1.1 2.3E-05 43.3 14.4 30 233-264 195-224 (325)
498 PTZ00384 choline kinase; Provi 94.5 0.34 7.4E-06 47.9 10.8 73 119-197 56-137 (383)
499 PF08693 SKG6: Transmembrane a 94.3 0.032 6.9E-07 35.4 1.9 31 51-81 9-39 (40)
500 PTZ00296 choline kinase; Provi 94.0 0.42 9.2E-06 48.2 10.3 140 118-264 110-313 (442)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-49 Score=381.27 Aligned_cols=249 Identities=45% Similarity=0.752 Sum_probs=215.5
Q ss_pred CCccccHHHHHHHhCCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEE
Q 048535 99 WPHRVSYQEIHAATKGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWC 177 (409)
Q Consensus 99 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~ 177 (409)
..+.|+++++..+|++|...+.||+|+||.||+|... |..||||++.....+..++|.+|++++.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 4567999999999999999999999999999999999 589999988765433146699999999999999999999999
Q ss_pred EccCC-eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEE
Q 048535 178 KKEKE-SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARL 256 (409)
Q Consensus 178 ~~~~~-~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl 256 (409)
.+ .+ ..+||||||++|+|.++|+..... +++|.+|++||.++|+||+|||+.+.++||||||||+|||||+++++||
T Consensus 141 ~e-~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 141 LE-GGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred ec-CCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence 98 45 589999999999999999875443 8999999999999999999999988889999999999999999999999
Q ss_pred ecccCcccccC----------Cc-----------------------------eeeecccccc----CCCcHHHHHHhhhc
Q 048535 257 GDFGLAKMHHH----------GQ-----------------------------VMSGRRPIEE----GKRNLVDRMWSLTE 293 (409)
Q Consensus 257 ~DFGla~~~~~----------~~-----------------------------~~~g~~p~~~----~~~~~~~~vws~~~ 293 (409)
+|||+|+.... ++ +++|+++.+. +...+..|+|....
T Consensus 219 sDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 219 SDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE 298 (361)
T ss_pred cCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence 99999987653 11 4567766653 33457888888888
Q ss_pred cCcHHHHhhHHhhhcCCCCH-HHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCC
Q 048535 294 RSELLSVLDERLKAKGGYAD-EVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEG 350 (409)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 350 (409)
.+.+.+++|+++.. ..++. ..+.++..++.+|++.+|.+||+|.||+++|+.....
T Consensus 299 ~~~~~eiiD~~l~~-~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 299 EGKLREIVDPRLKE-GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred CcchhheeCCCccC-CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 88999999999864 34454 6888899999999999999999999999999665433
No 2
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-42 Score=335.03 Aligned_cols=230 Identities=28% Similarity=0.483 Sum_probs=189.6
Q ss_pred CCCCccceeecCCceEEEEEEECCc-EEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLLGV-EVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~~~-~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
+.++..+.||+|.||.||.|.+.+. .||+|.++.. ....+.|.+|+.+|++|+|+|||+++|+|.. +..+|||||||
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~-~~piyIVtE~m 283 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTK-QEPIYIVTEYM 283 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEec-CCceEEEEEec
Confidence 3345568899999999999999965 9999999865 2334789999999999999999999999987 55799999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM 271 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 271 (409)
+.|+|.+||.. ..+..+...+.+.++.|||+||+||+ ++++|||||.++|||++++..+||+||||||....+...
T Consensus 284 ~~GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~ 359 (468)
T KOG0197|consen 284 PKGSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT 359 (468)
T ss_pred ccCcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCcee
Confidence 99999999976 34567999999999999999999999 899999999999999999999999999999966655432
Q ss_pred ---eecccc--------ccCCCcHHHHHHhhhc--------------c---CcHHHHhhHHhhhcCCCCHHHHHHHHHHH
Q 048535 272 ---SGRRPI--------EEGKRNLVDRMWSLTE--------------R---SELLSVLDERLKAKGGYADEVVEKVLHLG 323 (409)
Q Consensus 272 ---~g~~p~--------~~~~~~~~~~vws~~~--------------~---~~~~~~~~~~l~~~~~~~~~~~~~l~~l~ 323 (409)
.++.|+ ..+.++.++||||++. . .+..+.++...+ -+.|..++.++.+|+
T Consensus 360 ~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyR--lp~P~~CP~~vY~lM 437 (468)
T KOG0197|consen 360 ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYR--LPRPEGCPDEVYELM 437 (468)
T ss_pred ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCc--CCCCCCCCHHHHHHH
Confidence 234443 2377889999998821 1 122333333333 356777889999999
Q ss_pred HHccCcCCCCCCCHHHHHHHHhcCcCC
Q 048535 324 LLCAHPEANSRPTIRQVLKMLEGQTEG 350 (409)
Q Consensus 324 ~~Cl~~dP~~RPt~~evl~~L~~~~~~ 350 (409)
..||+.+|++|||++.+...|+.....
T Consensus 438 ~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 438 KSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred HHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 999999999999999999998876543
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-41 Score=312.63 Aligned_cols=224 Identities=25% Similarity=0.381 Sum_probs=184.8
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCC-eEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE-SLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-~~~lv~E 189 (409)
+++..+.||+|..|+|||+.++ ++.+|+|++... ++...+++.+|++++++.+||+||+++|.|.. +. .+.|+||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~-~~~~isI~mE 158 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS-NGEEISICME 158 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe-CCceEEeehh
Confidence 3445688999999999999998 899999999655 55667899999999999999999999999998 55 5999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
||++|||++++.. .+.+++...-+|+.+|++||.|||+ +.+||||||||+|||++..|++||||||.++.+..+.
T Consensus 159 YMDgGSLd~~~k~---~g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~ 233 (364)
T KOG0581|consen 159 YMDGGSLDDILKR---VGRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSI 233 (364)
T ss_pred hcCCCCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhh
Confidence 9999999999953 3579999999999999999999995 4899999999999999999999999999999876652
Q ss_pred --eeeeccccc------cCCCcHHHHHHhhh-------------c-----cCcHHHHhhHHhhh-cCCCCHH-HHHHHHH
Q 048535 270 --VMSGRRPIE------EGKRNLVDRMWSLT-------------E-----RSELLSVLDERLKA-KGGYADE-VVEKVLH 321 (409)
Q Consensus 270 --~~~g~~p~~------~~~~~~~~~vws~~-------------~-----~~~~~~~~~~~l~~-~~~~~~~-~~~~l~~ 321 (409)
...|...+. .+.|+..+|+|+++ . ...+.+.++..... .+..+.+ +++++..
T Consensus 234 a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~ 313 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRS 313 (364)
T ss_pred cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHH
Confidence 233444432 36788889999982 0 12445555555542 2344554 7888999
Q ss_pred HHHHccCcCCCCCCCHHHHHHH
Q 048535 322 LGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
++..|++.||.+|||++|+++.
T Consensus 314 FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 314 FVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HHHHHhcCCcccCCCHHHHhcC
Confidence 9999999999999999999863
No 4
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-42 Score=339.17 Aligned_cols=230 Identities=29% Similarity=0.533 Sum_probs=194.0
Q ss_pred CCccceeecCCceEEEEEEEC--C---cEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--G---VEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~---~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
..+++.||.|.||+||+|.++ | ..||||.++.. .++++.+|+.|+.||.+++||||++|.|+... .....||+
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk-s~PvMIiT 709 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK-SKPVMIIT 709 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEec-CceeEEEh
Confidence 346689999999999999997 3 56999999877 67788999999999999999999999999987 66789999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
|||+||+|+.||+.++ +.+++.++..++++||.||.||. +.++|||||.++|||++.+..+|++||||+|.+.++
T Consensus 710 EyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred hhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccC
Confidence 9999999999998755 45999999999999999999999 899999999999999999999999999999987554
Q ss_pred c-----eeeeccccc--------cCCCcHHHHHHhhh-----------------ccCcHHHHhhHHhhhcCCCCHHHHHH
Q 048535 269 Q-----VMSGRRPIE--------EGKRNLVDRMWSLT-----------------ERSELLSVLDERLKAKGGYADEVVEK 318 (409)
Q Consensus 269 ~-----~~~g~~p~~--------~~~~~~~~~vws~~-----------------~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (409)
. ..-|+-|+. ..+.+..+|||+++ ...+....+....+ -+.|.+++..
T Consensus 785 ~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyR--LPpPmDCP~a 862 (996)
T KOG0196|consen 785 PEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYR--LPPPMDCPAA 862 (996)
T ss_pred CCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccC--CCCCCCCcHH
Confidence 3 233454543 35678889999981 11223334444444 4567788899
Q ss_pred HHHHHHHccCcCCCCCCCHHHHHHHHhcCcCCCC
Q 048535 319 VLHLGLLCAHPEANSRPTIRQVLKMLEGQTEGTG 352 (409)
Q Consensus 319 l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~ 352 (409)
+.+|++.||+.|-.+||++.|++..|+++...|.
T Consensus 863 L~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~ 896 (996)
T KOG0196|consen 863 LYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN 896 (996)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence 9999999999999999999999999998876654
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=321.81 Aligned_cols=228 Identities=28% Similarity=0.453 Sum_probs=178.5
Q ss_pred CccceeecCCceEEEEEEECCcE-EEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 116 SEENVIGLGGNGKVYKGQLLGVE-VALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 116 ~~~~~lG~G~fg~Vy~~~~~~~~-vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
...+.||+|+||+||+|.+.|+. ||||++... +....++|.+|+.+|.+++|||||+++|+|.+....++||||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 33456999999999999999888 999999764 233367999999999999999999999999974337999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc-eeecCCCCCCeeeCCCC-cEEEecccCcccccCC-c
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESK-VLHRDIKASNVLLDKKM-NARLGDFGLAKMHHHG-Q 269 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivHrDlKp~NILl~~~~-~~kl~DFGla~~~~~~-~ 269 (409)
+|+|.++++.. ....+++..+++++.|||+||.||| +.+ ||||||||+|||++.++ ++||||||+++..... .
T Consensus 124 ~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~ 199 (362)
T KOG0192|consen 124 GGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKT 199 (362)
T ss_pred CCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccc
Confidence 99999999764 4567999999999999999999999 677 99999999999999997 9999999999876642 1
Q ss_pred e---eeecccc------c--cCCCcHHHH-------HHhhhccCcHH----------HHhhHHhhhcCCCCHHHHHHHHH
Q 048535 270 V---MSGRRPI------E--EGKRNLVDR-------MWSLTERSELL----------SVLDERLKAKGGYADEVVEKVLH 321 (409)
Q Consensus 270 ~---~~g~~p~------~--~~~~~~~~~-------vws~~~~~~~~----------~~~~~~l~~~~~~~~~~~~~l~~ 321 (409)
. .+|...+ . ...++.+.| +|++......+ .++....+ +..+..+...+..
T Consensus 200 ~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~R--p~~p~~~~~~l~~ 277 (362)
T KOG0192|consen 200 SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLR--PPIPKECPPHLSS 277 (362)
T ss_pred cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCC--CCCCccCCHHHHH
Confidence 1 1222221 1 113444445 45553332111 11112222 4456668889999
Q ss_pred HHHHccCcCCCCCCCHHHHHHHHhcCcC
Q 048535 322 LGLLCAHPEANSRPTIRQVLKMLEGQTE 349 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 349 (409)
++.+||+.||+.||++.+++..|+.+..
T Consensus 278 l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 278 LMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred HHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999987654
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-39 Score=300.20 Aligned_cols=244 Identities=24% Similarity=0.365 Sum_probs=190.1
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
..+|...+.||+|+||+||+|+++ +..||||.+... ..+..+.+..|+.+|+.++|||||++++++.+ ++.+|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~-~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIED-DDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEec-CCeEEEE
Confidence 467888889999999999999997 899999999766 56677788999999999999999999999987 7899999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC------CcEEEecccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK------MNARLGDFGL 261 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~------~~~kl~DFGl 261 (409)
||||.+|||.+||+. .+.+++.....++.|+|.||++|| +++||||||||.||||+.. -.+||+|||+
T Consensus 88 MEyC~gGDLs~yi~~---~~~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRR---RGRLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 999999999999964 347999999999999999999999 8999999999999999765 4589999999
Q ss_pred cccccCCc---eeeeccccc------cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCC
Q 048535 262 AKMHHHGQ---VMSGRRPIE------EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEAN 332 (409)
Q Consensus 262 a~~~~~~~---~~~g~~p~~------~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~ 332 (409)
||....+. .++|.+-+. ...|+.+.|+|+++ ..+++.+ .-..|-
T Consensus 162 AR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG--~Ilyq~l-------------------------~g~~Pf 214 (429)
T KOG0595|consen 162 ARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIG--TILYQCL-------------------------TGKPPF 214 (429)
T ss_pred hhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHH--HHHHHHH-------------------------hCCCCc
Confidence 99998765 456766553 36788899999986 2223222 234555
Q ss_pred CCCCHHHHHHHHhcCcCCCCCCCCC-cc--hhHHhhhcccCCCCcccccccCCCCCcccc
Q 048535 333 SRPTIRQVLKMLEGQTEGTGLEDEG-MN--VHLLKRIGTRAMTSSWKFAGSRGHPTFNEI 389 (409)
Q Consensus 333 ~RPt~~evl~~L~~~~~~~~~~~~~-~~--~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~ 389 (409)
++.|..|++...+.........+.. .+ .+++-..+..++..|++..+-..||+...-
T Consensus 215 ~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~ 274 (429)
T KOG0595|consen 215 DAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAAN 274 (429)
T ss_pred cccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccC
Confidence 6666666666665443322222211 11 366666666766777776666666654443
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-39 Score=316.55 Aligned_cols=224 Identities=22% Similarity=0.385 Sum_probs=190.9
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
..|...+.||+|||+.||+++.. |+.||+|++... ...+.+...+||++.+.|+|||||+++++|.+ .+++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED-s~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED-SNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec-CCceEEE
Confidence 56889999999999999999984 999999999764 55667889999999999999999999999998 7899999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
.|+|++|+|..+++ ...++++.++..++.||+.||.||| +.+|+|||||..|++|++++++||+|||||.....
T Consensus 97 LELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 97 LELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EEecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecC
Confidence 99999999999995 4467999999999999999999999 89999999999999999999999999999988774
Q ss_pred C----ceeeecccccc------CCCcHHHHHHhhh-------------ccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHH
Q 048535 268 G----QVMSGRRPIEE------GKRNLVDRMWSLT-------------ERSELLSVLDERLKAKGGYADEVVEKVLHLGL 324 (409)
Q Consensus 268 ~----~~~~g~~p~~~------~~~~~~~~vws~~-------------~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~ 324 (409)
+ ..+||.+.+-. ...++..|+|+++ ....+.+..+......-..|...+.+..+|+.
T Consensus 171 ~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~ 250 (592)
T KOG0575|consen 171 DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIR 250 (592)
T ss_pred cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHH
Confidence 4 27788876543 5568899999984 22334444444333333445566778899999
Q ss_pred HccCcCCCCCCCHHHHHHH
Q 048535 325 LCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 325 ~Cl~~dP~~RPt~~evl~~ 343 (409)
..|+.||.+|||+++|+..
T Consensus 251 ~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 251 KLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred HHhcCCcccCCCHHHHhcC
Confidence 9999999999999999863
No 8
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.7e-40 Score=332.53 Aligned_cols=235 Identities=23% Similarity=0.411 Sum_probs=190.0
Q ss_pred HhCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccCCh-HHHHHHHHHHHHhccCCCCceeeEeeEEEccCC
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLDSE-HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE 182 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 182 (409)
.+.+.+..+.||+|.||.||+|+.. ...||||.++.... +..++|.+|+++|..|+|||||+++|+|.+ ++
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~-~~ 562 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE-GD 562 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc-CC
Confidence 3455666789999999999999876 25699999987744 478899999999999999999999999998 78
Q ss_pred eEEEEEEeCCCCCHHHHHhcCC-------C----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC
Q 048535 183 SLILIYDYMENGSLDKWIFECD-------E----SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK 251 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~-------~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~ 251 (409)
.+++|+|||..|||.+||+... . ..+|+..+.+.||.|||.||+||- ++.+|||||..+|+||+++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccc
Confidence 8999999999999999997431 1 234899999999999999999999 8999999999999999999
Q ss_pred CcEEEecccCcccccCCceee------------eccccccCCCcHHHHHHhhhcc-----------------CcHHHHhh
Q 048535 252 MNARLGDFGLAKMHHHGQVMS------------GRRPIEEGKRNLVDRMWSLTER-----------------SELLSVLD 302 (409)
Q Consensus 252 ~~~kl~DFGla~~~~~~~~~~------------g~~p~~~~~~~~~~~vws~~~~-----------------~~~~~~~~ 302 (409)
..+||+||||+|..-..++.- ....+..+.++..+|||+++.- .+..+.+.
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~ 719 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR 719 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH
Confidence 999999999999765443221 1222345788888999887211 11112222
Q ss_pred HHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCCC
Q 048535 303 ERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEGT 351 (409)
Q Consensus 303 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 351 (409)
.+-. -+.++.++.++..|+..||+.+|.+||+++||-..|+...+..
T Consensus 720 ~g~l--L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 720 AGQL--LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred cCCc--ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 1111 3567788899999999999999999999999999998765543
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-39 Score=303.66 Aligned_cols=224 Identities=24% Similarity=0.330 Sum_probs=180.3
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChH-------HHHHHHHHHHHhccCCCCceeeEeeEEEccCC
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEH-------GMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE 182 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 182 (409)
.+.|-..+.||+|+||.|-+|..+ |+.||||+++..... ......+|+++|++|+|||||++++++.. ..
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~-~d 249 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV-PD 249 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec-CC
Confidence 355777899999999999999887 999999999754111 12235799999999999999999999987 67
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC---CcEEEecc
Q 048535 183 SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK---MNARLGDF 259 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~---~~~kl~DF 259 (409)
..|+||||++||+|.+++- .+..+.+..-.-++.|++.|+.||| ++||+||||||+|||+..+ ..+||+||
T Consensus 250 s~YmVlE~v~GGeLfd~vv---~nk~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVV---ANKYLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ceEEEEEEecCccHHHHHH---hccccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEeccc
Confidence 7899999999999999985 3456888888999999999999999 8999999999999999766 77999999
Q ss_pred cCcccccCCc---eeeecccccc---------CCCcHHHHHHhhhc-----------------cC-cHHHHhhHHhhhcC
Q 048535 260 GLAKMHHHGQ---VMSGRRPIEE---------GKRNLVDRMWSLTE-----------------RS-ELLSVLDERLKAKG 309 (409)
Q Consensus 260 Gla~~~~~~~---~~~g~~p~~~---------~~~~~~~~vws~~~-----------------~~-~~~~~~~~~l~~~~ 309 (409)
|+|+....+. .+||.+.+-. ..+.-+.|+|+++. .. -..++...+....+
T Consensus 324 GlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p 403 (475)
T KOG0615|consen 324 GLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGP 403 (475)
T ss_pred chhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccC
Confidence 9999987654 5577766532 22334669999821 11 12334444555445
Q ss_pred CCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 310 GYADEVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 310 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
..+.+..++.++++.++|..||++|||+.|+++
T Consensus 404 ~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 404 LQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 566778899999999999999999999998875
No 10
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.9e-38 Score=280.28 Aligned_cols=265 Identities=22% Similarity=0.305 Sum_probs=207.0
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChH--HHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEH--GMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
..|...+.||+|.||.||+|++. |+.||||+++..... -....++|+..|+.++|+||+.+++.|-. .+.+.||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~-~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH-KSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC-CCceEEEE
Confidence 45777899999999999999987 999999999876322 23567899999999999999999999987 77899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
|||+. +|...+++ +...++..++..++.++++||+||| .+.|+||||||.|+|++++|.+||+|||+|+.+...
T Consensus 81 Efm~t-dLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred Eeccc-cHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 99988 99999975 4567999999999999999999999 899999999999999999999999999999987643
Q ss_pred c------eeee-cccc----ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCH
Q 048535 269 Q------VMSG-RRPI----EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTI 337 (409)
Q Consensus 269 ~------~~~g-~~p~----~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 337 (409)
. +.|. .++. ....|....|+|+.+ +.+.+++-...-..++. ..+++..+....-.+.|++=|.|
T Consensus 155 ~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavG--CI~AELllr~P~fpG~s---DidQL~~If~~LGTP~~~~WP~~ 229 (318)
T KOG0659|consen 155 NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVG--CIFAELLLRVPFFPGDS---DIDQLSKIFRALGTPTPDQWPEM 229 (318)
T ss_pred CcccccceeeeeccChHHhccchhcCCcchhhhHH--HHHHHHHccCCCCCCCc---hHHHHHHHHHHcCCCCcccCccc
Confidence 2 1221 1111 234567778999987 45555554443333333 34455556666678899999988
Q ss_pred HHHHHHHhcCcCCCCCCC-------CCcchhHHhhhcccCCCCcccccccCCCCCccccc
Q 048535 338 RQVLKMLEGQTEGTGLED-------EGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEIN 390 (409)
Q Consensus 338 ~evl~~L~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~ 390 (409)
.++-+..+=. ..|.++. .....|++.+|+..+|.+|+++++++.||||++..
T Consensus 230 ~~lpdY~~~~-~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 230 TSLPDYVKIQ-QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP 288 (318)
T ss_pred cccccHHHHh-cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence 8876654422 1111111 11238999999999999999999999999999744
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-39 Score=289.48 Aligned_cols=231 Identities=25% Similarity=0.385 Sum_probs=185.1
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCe-EEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKES-LILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~-~~lv 187 (409)
.+|++.++||+|.||+||++... |..||.|.++.+ +.+..+.+..|+.+|++|+|||||+++++...++.. ++||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 45778899999999999999876 999999999865 666778899999999999999999999954433444 8999
Q ss_pred EEeCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc--eeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 188 YDYMENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESK--VLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
||||..|+|.+.+... ..+..+++..+++++.|++.||..+|..+ ++ |+||||||.||+|+.+|.+||+||||++.
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 9999999999999754 34557999999999999999999999533 44 99999999999999999999999999999
Q ss_pred ccCCc----eeeecccc------ccCCCcHHHHHHhhh-------------ccCcHHHHhhHHhhhcCCC---C-HHHHH
Q 048535 265 HHHGQ----VMSGRRPI------EEGKRNLVDRMWSLT-------------ERSELLSVLDERLKAKGGY---A-DEVVE 317 (409)
Q Consensus 265 ~~~~~----~~~g~~p~------~~~~~~~~~~vws~~-------------~~~~~~~~~~~~l~~~~~~---~-~~~~~ 317 (409)
+.... .+.|.+.+ ....|+.++|+|+++ ....+.++-.+.-. +++ + ...+.
T Consensus 178 l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~q--gd~~~~p~~~YS~ 255 (375)
T KOG0591|consen 178 LSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQ--GDYPPLPDEHYST 255 (375)
T ss_pred hcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHc--CCCCCCcHHHhhh
Confidence 87655 23344433 247899999999983 11233333333222 333 3 56788
Q ss_pred HHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 318 KVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 318 ~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
.+..|+..|+..||+.||+...+++.+..
T Consensus 256 ~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 256 DLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred HHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 89999999999999999996666665554
No 12
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-38 Score=301.28 Aligned_cols=261 Identities=25% Similarity=0.380 Sum_probs=201.0
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCeEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KESLIL 186 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~~l 186 (409)
.+.|+.+++||+|.||.||+|+.. |+.||+|+++.+. +....-..+||.+|++|+||||++|.+...+. ...+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 356778899999999999999987 9999999998764 34455678999999999999999999998874 468999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
|+|||+. ||.-++.. ....+++.++..++.|++.||+|+| .++|+|||||.+|||||.+|.+||+|||||+++.
T Consensus 196 VFeYMdh-DL~GLl~~--p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSS--PGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEecccc-hhhhhhcC--CCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeecc
Confidence 9999998 99988843 4567999999999999999999999 8999999999999999999999999999999776
Q ss_pred CCc--eeee------ccccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCC
Q 048535 267 HGQ--VMSG------RRPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSR 334 (409)
Q Consensus 267 ~~~--~~~g------~~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R 334 (409)
... .+|. ++|.+ ...|+...|+|+.+ +.+.+++..+.-..+ ..+++++-.|-..|-.+.++-=
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~G--CIl~El~~gkPI~~G---~tEveQl~kIfklcGSP~e~~W 344 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVG--CILAELFLGKPILQG---RTEVEQLHKIFKLCGSPTEDYW 344 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhh--HHHHHHHcCCCCcCC---ccHHHHHHHHHHHhCCCChhcc
Confidence 543 1222 22322 36688889999987 556666554433222 3455666777777877766543
Q ss_pred CCHHHHH------------HHHhcCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCccc
Q 048535 335 PTIRQVL------------KMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNE 388 (409)
Q Consensus 335 Pt~~evl------------~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~ 388 (409)
| ...+- ..|.+... ..+....+|++.|+..||.+|.++.+++.|+||+.
T Consensus 345 ~-~~kLP~~~~~kp~~~y~r~l~E~~~----~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t 405 (560)
T KOG0600|consen 345 P-VSKLPHATIFKPQQPYKRRLRETFK----DFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT 405 (560)
T ss_pred c-cccCCcccccCCCCcccchHHHHhc----cCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence 3 11110 11111100 11223589999999999999999999999999944
No 13
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=298.69 Aligned_cols=236 Identities=26% Similarity=0.417 Sum_probs=184.7
Q ss_pred hCCCCccceeecCCceEEEEEEEC---C--cE-EEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCC
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL---G--VE-VALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE 182 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~---~--~~-vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 182 (409)
-++....++||+|+||.||+|++. + .. ||||..+.. ......+|++|+++|++++|||||+++|++.. ..
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~-~~ 234 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL-EE 234 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC-CC
Confidence 344555689999999999999987 2 23 899999853 56778999999999999999999999999998 77
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 183 SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
.++||||+|+||+|.+||.+.. ..++..+++.++.|.|.||+||| ++++|||||.++|+|++.++.+||+||||+
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~~--~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs 309 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKNK--KSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLS 309 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccc
Confidence 8999999999999999997533 26999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCceee--ecccc--------ccCCCcHHHHHHhhh-------cc-------CcHHHHhhHHhh--hcCCCCHHHH
Q 048535 263 KMHHHGQVMS--GRRPI--------EEGKRNLVDRMWSLT-------ER-------SELLSVLDERLK--AKGGYADEVV 316 (409)
Q Consensus 263 ~~~~~~~~~~--g~~p~--------~~~~~~~~~~vws~~-------~~-------~~~~~~~~~~l~--~~~~~~~~~~ 316 (409)
+......... -+.|. ..+.++...|||+++ .. ....++...... .....+...+
T Consensus 310 ~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p 389 (474)
T KOG0194|consen 310 RAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTP 389 (474)
T ss_pred cCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCH
Confidence 8765211111 01222 236778889999872 11 111111111101 1123445667
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCCCCC
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEGTGL 353 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~ 353 (409)
..+..++.+||..+|++||||.++.+.|+........
T Consensus 390 ~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 390 KELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred HHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 7788899999999999999999999999887655443
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4.4e-37 Score=277.22 Aligned_cols=172 Identities=24% Similarity=0.346 Sum_probs=142.5
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
+.|+...++|+|+||.||+|+.+ |+.||||++... ++.-.+-.++|+++|++++|+|+|.++.+|.. ...++||+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr-krklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR-KRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh-cceeEEEe
Confidence 35777789999999999999987 999999999654 34445667899999999999999999999987 78999999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc-C
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH-H 267 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~-~ 267 (409)
|||+. ++.+-|.. ....++...+.+++.|+++|+.|+| ++++|||||||+||||+.++.+||||||+|+.+. .
T Consensus 81 E~~dh-TvL~eLe~--~p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 81 EYCDH-TVLHELER--YPNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred eecch-HHHHHHHh--ccCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 99988 44444433 2345899999999999999999999 8999999999999999999999999999999887 4
Q ss_pred Cceeeecccc----------ccCCCcHHHHHHhh
Q 048535 268 GQVMSGRRPI----------EEGKRNLVDRMWSL 291 (409)
Q Consensus 268 ~~~~~g~~p~----------~~~~~~~~~~vws~ 291 (409)
++..|..... ....|....|+|++
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAi 188 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAI 188 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhh
Confidence 4433332211 12456777899987
No 15
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=301.93 Aligned_cols=239 Identities=22% Similarity=0.411 Sum_probs=198.0
Q ss_pred HHHHHHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCC
Q 048535 105 YQEIHAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE 182 (409)
Q Consensus 105 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 182 (409)
+++++....+.....+||-|.||.||.|.|+ ...||||.++.+. ...++|+.|+.+|+.++|||+|+|+|+|.. ..
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~-Ep 336 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTH-EP 336 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhcc-CC
Confidence 3556666666777789999999999999998 7889999998653 456899999999999999999999999997 66
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 183 SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
.+|||+|||.+|+|.+||++++. ..++.-..+.++.||+.||+||. .+++|||||.++|+|+.++..+||+||||+
T Consensus 337 PFYIiTEfM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLs 412 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLS 412 (1157)
T ss_pred CeEEEEecccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchh
Confidence 78999999999999999998654 46788889999999999999999 899999999999999999999999999999
Q ss_pred ccccCCceee---ecccc--------ccCCCcHHHHHHhhh-----------------ccCcHHHHhhHHhhhcCCCCHH
Q 048535 263 KMHHHGQVMS---GRRPI--------EEGKRNLVDRMWSLT-----------------ERSELLSVLDERLKAKGGYADE 314 (409)
Q Consensus 263 ~~~~~~~~~~---g~~p~--------~~~~~~~~~~vws~~-----------------~~~~~~~~~~~~l~~~~~~~~~ 314 (409)
+++..+++.. .+.|+ ..+.++.++|||.+. +....++++....+ .+-++.
T Consensus 413 RlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyR--M~~PeG 490 (1157)
T KOG4278|consen 413 RLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYR--MDGPEG 490 (1157)
T ss_pred hhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccc--ccCCCC
Confidence 9988766332 12232 236678889999872 11234455555544 455778
Q ss_pred HHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCCC
Q 048535 315 VVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEGT 351 (409)
Q Consensus 315 ~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 351 (409)
|++.+.+|++.||+++|.+||+++|+-+.++.+....
T Consensus 491 CPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 491 CPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred CCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 8899999999999999999999999999887654443
No 16
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-37 Score=294.83 Aligned_cols=248 Identities=21% Similarity=0.270 Sum_probs=189.5
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCe
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKES 183 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 183 (409)
...++|..++.||.|+|++|++|+.. ++.+|||++.+. .....+-...|-.+|.+| .||.|++|+-.|.+ ...
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD-~~s 148 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD-EES 148 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec-ccc
Confidence 34578999999999999999999987 899999999754 222234466788999999 89999999998887 788
Q ss_pred EEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcc
Q 048535 184 LILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAK 263 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 263 (409)
+|.|+||+++|+|.++|++ .+.+++.....++.||+.||+||| ++|||||||||+|||||+||++||+|||.|+
T Consensus 149 LYFvLe~A~nGdll~~i~K---~Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKK---YGSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred eEEEEEecCCCcHHHHHHH---hCcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccc
Confidence 9999999999999999954 467999999999999999999999 9999999999999999999999999999999
Q ss_pred cccCCcee-----------------eecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHH
Q 048535 264 MHHHGQVM-----------------SGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVL 320 (409)
Q Consensus 264 ~~~~~~~~-----------------~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 320 (409)
.+...... .|..-+ .....+..+|+|.++ +.+++++.+..++.+. ++..-+.
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlG--CilyQmlaG~PPFra~---NeyliFq 297 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALG--CILYQMLAGQPPFRAA---NEYLIFQ 297 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHH--HHHHHHhcCCCCCccc---cHHHHHH
Confidence 87654311 121111 124446778899887 6677776655443221 2222223
Q ss_pred HHHHHccCcCCCCCCCHHHHHHHHhcCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCcccccc
Q 048535 321 HLGLLCAHPEANSRPTIRQVLKMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINK 391 (409)
Q Consensus 321 ~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~ 391 (409)
+++..-...-|.-+ ....+|+.+++..+|..|++++++..||||++|+-
T Consensus 298 kI~~l~y~fp~~fp----------------------~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw 346 (604)
T KOG0592|consen 298 KIQALDYEFPEGFP----------------------EDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDW 346 (604)
T ss_pred HHHHhcccCCCCCC----------------------HHHHHHHHHHHccCccccccHHHHhhCcccccCCh
Confidence 33222222222222 23367778888889999999999999999998873
No 17
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-37 Score=297.02 Aligned_cols=235 Identities=24% Similarity=0.399 Sum_probs=191.3
Q ss_pred cccHHHHHHHhCCCCccceeecCCceEEEEEEECCcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEc
Q 048535 102 RVSYQEIHAATKGFSEENVIGLGGNGKVYKGQLLGVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKK 179 (409)
Q Consensus 102 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 179 (409)
+.+.+++....+.+.+.+.||+|.||+||+|.|.|. ||||+++.+ ++.+.+.|.+|+..+++-+|.||+-+.|||..
T Consensus 381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd-VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD-VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred CccccccccCHHHhhccceeccccccceeecccccc-eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 445567777778888899999999999999999985 999999876 56678899999999999999999999999986
Q ss_pred cCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecc
Q 048535 180 EKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDF 259 (409)
Q Consensus 180 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DF 259 (409)
+ .+.||+.+|+|-+|+.+||..+ ..+...+.+.|+.|||+||.||| .++|||||||..||+|.+++++||+||
T Consensus 460 -p-~~AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDF 532 (678)
T KOG0193|consen 460 -P-PLAIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDF 532 (678)
T ss_pred -C-ceeeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecc
Confidence 3 3489999999999999998643 56899999999999999999999 899999999999999999999999999
Q ss_pred cCcccccCCceeeecc------------------ccccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCC-----------
Q 048535 260 GLAKMHHHGQVMSGRR------------------PIEEGKRNLVDRMWSLTERSELLSVLDERLKAKGG----------- 310 (409)
Q Consensus 260 Gla~~~~~~~~~~g~~------------------p~~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~----------- 310 (409)
||+..-.. +.|.. -.+...+++.+||++++ ..+++++...++....
T Consensus 533 GLatvk~~---w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFG--iV~YELltg~lPysi~~~dqIifmVGr 607 (678)
T KOG0193|consen 533 GLATVKTR---WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFG--IVWYELLTGELPYSIQNRDQIIFMVGR 607 (678)
T ss_pred cceeeeee---eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhh--HHHHHHHhCcCCcCCCChhheEEEecc
Confidence 99864221 11111 11235677888888875 3455555554443211
Q ss_pred ---------CCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcC
Q 048535 311 ---------YADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTE 349 (409)
Q Consensus 311 ---------~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 349 (409)
....+.+++.+|+..||..++++||.+.+++..|+....
T Consensus 608 G~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 608 GYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred cccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 122456689999999999999999999999998887655
No 18
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-36 Score=279.17 Aligned_cols=246 Identities=25% Similarity=0.292 Sum_probs=190.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
.++|+..+.||+|+||.||.++.. ++.+|+|++++. .....+...+|..+|.+++||.||+++-.|.+ .+.+|+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt-~~kLyl 102 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQT-EEKLYL 102 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEeccc-CCeEEE
Confidence 478999999999999999999876 899999999765 33456778899999999999999999988887 889999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
|+||+.||.|..+|. ..+.+++..+.-++.+|+.||.||| +.+||||||||+|||||.+|.++|+||||++...
T Consensus 103 Vld~~~GGeLf~hL~---~eg~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQ---REGRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EEeccCCccHHHHHH---hcCCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 999999999999994 4467999999999999999999999 8999999999999999999999999999999543
Q ss_pred CC----ceeeecccccc------CCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCC
Q 048535 267 HG----QVMSGRRPIEE------GKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPT 336 (409)
Q Consensus 267 ~~----~~~~g~~p~~~------~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt 336 (409)
.. ...+|+..+.. ..|+-..|.|+++ ..+++++....+ +..+...++.+-+..+=
T Consensus 177 ~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLG--illYeML~G~pP----F~~~~~~~~~~~I~~~k--------- 241 (357)
T KOG0598|consen 177 KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLG--ILLYEMLTGKPP----FYAEDVKKMYDKILKGK--------- 241 (357)
T ss_pred cCCCccccccCCccccChHHHhcCCCCcccchHhHH--HHHHHHhhCCCC----CcCccHHHHHHHHhcCc---------
Confidence 32 35677777643 5778889999997 344555443322 22222222222111110
Q ss_pred HHHHHHHHhcCcCCCCCCCCCcchhHHhhhcccCCCCcc----cccccCCCCCccccc
Q 048535 337 IRQVLKMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSW----KFAGSRGHPTFNEIN 390 (409)
Q Consensus 337 ~~evl~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~hp~~~~~~ 390 (409)
...++.--....++++.+++..+|.+|+ ...++..||||..++
T Consensus 242 -----------~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~in 288 (357)
T KOG0598|consen 242 -----------LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGIN 288 (357)
T ss_pred -----------CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCC
Confidence 1111111122348889999999999996 356888999999987
No 19
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.6e-36 Score=294.45 Aligned_cols=233 Identities=24% Similarity=0.390 Sum_probs=177.9
Q ss_pred HhCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccC
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEK 181 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 181 (409)
+.++|++.+.||+|+||.||+|.+. ++.||||+++.. .....+.+.+|+.++.++ +||||++++++|....
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 4567899999999999999999752 467999999754 334456799999999999 8999999999988756
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCCC--------------------------------------------------------
Q 048535 182 ESLILIYDYMENGSLDKWIFECDE-------------------------------------------------------- 205 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~~-------------------------------------------------------- 205 (409)
..+++||||+++|+|.+++.....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 678999999999999999964311
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc--eeee-------
Q 048535 206 ---SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--VMSG------- 273 (409)
Q Consensus 206 ---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--~~~g------- 273 (409)
...+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++...... ...+
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 134888999999999999999999 8999999999999999999999999999998653221 1111
Q ss_pred ccccc---cCCCcHHHHHHhhhccCcHHHHhh-HH---------------hhh--cCCCCHHHHHHHHHHHHHccCcCCC
Q 048535 274 RRPIE---EGKRNLVDRMWSLTERSELLSVLD-ER---------------LKA--KGGYADEVVEKVLHLGLLCAHPEAN 332 (409)
Q Consensus 274 ~~p~~---~~~~~~~~~vws~~~~~~~~~~~~-~~---------------l~~--~~~~~~~~~~~l~~l~~~Cl~~dP~ 332 (409)
..+.+ ...++..+|+|+++ ..+++++. .. +.. ....+......+.+++.+||+.||+
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG--~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 319 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFG--VLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPK 319 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHH--HHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChh
Confidence 11111 24456778899874 22222221 11 100 0111233456789999999999999
Q ss_pred CCCCHHHHHHHHhcCc
Q 048535 333 SRPTIRQVLKMLEGQT 348 (409)
Q Consensus 333 ~RPt~~evl~~L~~~~ 348 (409)
+|||+.|+++.|+...
T Consensus 320 ~RPs~~el~~~l~~~~ 335 (338)
T cd05102 320 ERPTFSALVEILGDLL 335 (338)
T ss_pred hCcCHHHHHHHHHHHH
Confidence 9999999999998754
No 20
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-37 Score=291.12 Aligned_cols=270 Identities=18% Similarity=0.260 Sum_probs=202.0
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChH-HHHHHHHHHHHhccCC-CCceeeEeeEEEccCCeEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEH-GMREFLAEVSSLGRLK-HRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~lv 187 (409)
-++|...++||.|.||.||+|+.. |..||||+++..-.. +...=++|+..|++|+ |||||++..++.+....+++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 367888899999999999999887 899999999765221 1122468999999998 999999999999855589999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
||||+. +|++++++. ...+++..+..|+.||++||+|+| .+|+.|||+||+|||+..+..+||+||||||....
T Consensus 89 fE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred HHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEeccccccccccc
Confidence 999977 999999864 568999999999999999999999 89999999999999999888999999999998765
Q ss_pred Cceee----eccc------cccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCH
Q 048535 268 GQVMS----GRRP------IEEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTI 337 (409)
Q Consensus 268 ~~~~~----g~~p------~~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 337 (409)
..-.| .+-. ...+.|+...|+|+++ +...++..-+..+++. .+.+++.++..-.-.++-+.=|+-
T Consensus 163 kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~G--cI~aEl~sLrPLFPG~---sE~Dqi~KIc~VLGtP~~~~~~eg 237 (538)
T KOG0661|consen 163 KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVG--CIMAELYSLRPLFPGA---SEIDQIYKICEVLGTPDKDSWPEG 237 (538)
T ss_pred CCCcchhhhcccccchHHhhhccccCCchHHHHHH--HHHHHHHHhcccCCCC---cHHHHHHHHHHHhCCCccccchhH
Confidence 43222 1111 1247788999999997 3344443322222232 334445555444445555555776
Q ss_pred HHHHHHHhcCcCC-CC-------CCCCCcchhHHhhhcccCCCCcccccccCCCCCccccccc
Q 048535 338 RQVLKMLEGQTEG-TG-------LEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINKN 392 (409)
Q Consensus 338 ~evl~~L~~~~~~-~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~~ 392 (409)
.++...|.=..+. .+ +.-......++.+|+.-||.+|.++++++.||||..-.+.
T Consensus 238 ~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~ 300 (538)
T KOG0661|consen 238 YNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRAS 300 (538)
T ss_pred HHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccccc
Confidence 7777766422111 10 0011123789999999999999999999999999876544
No 21
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-36 Score=281.90 Aligned_cols=227 Identities=24% Similarity=0.355 Sum_probs=176.3
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCC-eEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE-SLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-~~~lv~E 189 (409)
.++...+.||+|+||.||++... |...|||.+...+....+.+.+|+.+|++++|||||+++|......+ .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45677899999999999999987 79999999976643346778999999999999999999997554333 6899999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC-CCcEEEecccCcccccC-
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK-KMNARLGDFGLAKMHHH- 267 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~-~~~~kl~DFGla~~~~~- 267 (409)
|+++|||.+++..... .+++..+.++..||++||+||| +++||||||||+|||++. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 9999999999965432 6999999999999999999999 899999999999999999 79999999999987663
Q ss_pred -C-----ceeeeccccc------cC-CCcHHHHHHhhhcc-------CcH-HH-------HhhHHhh-hcCCCCHHHHHH
Q 048535 268 -G-----QVMSGRRPIE------EG-KRNLVDRMWSLTER-------SEL-LS-------VLDERLK-AKGGYADEVVEK 318 (409)
Q Consensus 268 -~-----~~~~g~~p~~------~~-~~~~~~~vws~~~~-------~~~-~~-------~~~~~l~-~~~~~~~~~~~~ 318 (409)
. ....|.+.+. .+ ......|+|+++.. ... .+ ++..... ..+.++...+.+
T Consensus 172 ~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~ 251 (313)
T KOG0198|consen 172 GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDE 251 (313)
T ss_pred cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHH
Confidence 1 1223332221 11 12247899998421 111 11 1111100 113566677788
Q ss_pred HHHHHHHccCcCCCCCCCHHHHHHHH
Q 048535 319 VLHLGLLCAHPEANSRPTIRQVLKML 344 (409)
Q Consensus 319 l~~l~~~Cl~~dP~~RPt~~evl~~L 344 (409)
..+++..|++.||++|||+.++++..
T Consensus 252 a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 252 AKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred HHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 99999999999999999999999864
No 22
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=287.62 Aligned_cols=232 Identities=27% Similarity=0.458 Sum_probs=182.0
Q ss_pred HhCCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
+.+...+.++||+|-||.|.+++.. +..||||+++.+. ...+++|.+|+++|.+|+|||||+++|+|.. ++.+++|+
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~-DePicmI~ 614 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ-DDPLCMIT 614 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec-CCchHHHH
Confidence 3445667789999999999999998 5999999998774 4456899999999999999999999999998 67899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
|||++|+|.+|+..+... .+.-...++|+.|||.||+||. +.++|||||.++|||+|.++++||+|||++|.+-.+
T Consensus 615 EYmEnGDLnqFl~aheap-t~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELP-TAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHhcCcHHHHHHhccCc-ccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccC
Confidence 999999999999765322 2455667889999999999999 899999999999999999999999999999965544
Q ss_pred c--eeeecc--cc--------ccCCCcHHHHHHhhhcc----------CcHHHHhhHHhh-------------hcCCCCH
Q 048535 269 Q--VMSGRR--PI--------EEGKRNLVDRMWSLTER----------SELLSVLDERLK-------------AKGGYAD 313 (409)
Q Consensus 269 ~--~~~g~~--p~--------~~~~~~~~~~vws~~~~----------~~~~~~~~~~l~-------------~~~~~~~ 313 (409)
. -+.|+. |+ --++.+.++|+|.+... ....++.|+... .....|.
T Consensus 691 ~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~ 770 (807)
T KOG1094|consen 691 DYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPP 770 (807)
T ss_pred CceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCC
Confidence 3 223332 11 12667778888876321 111122222111 0112344
Q ss_pred HHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 314 EVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 314 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
-++..+.+++++||..|.++||+++++...|+..
T Consensus 771 ~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 771 ACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 5677899999999999999999999999988754
No 23
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=310.10 Aligned_cols=235 Identities=28% Similarity=0.448 Sum_probs=187.4
Q ss_pred hCCCCccceeecCCceEEEEEEEC---Cc----EEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCe
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL---GV----EVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKES 183 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~---~~----~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 183 (409)
....+..+.||+|.||.||.|... |. .||||.++.. +.+...+|++|..+|++++|||||+++|+|.+ ...
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~-~~~ 769 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD-SGP 769 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-CCC
Confidence 345566788999999999999986 33 4999999766 66778899999999999999999999999998 778
Q ss_pred EEEEEEeCCCCCHHHHHhcCCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecc
Q 048535 184 LILIYDYMENGSLDKWIFECDE----SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDF 259 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DF 259 (409)
.+|++|||++|||..||++.+. ...++....+.++.|||+|+.||+ ++++|||||.++|+||+....+||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEccc
Confidence 8999999999999999987522 346899999999999999999999 899999999999999999999999999
Q ss_pred cCcccccCCceee----ecccc--------ccCCCcHHHHHHhhh--------------ccCcHHHHhhHHh-hhcCCCC
Q 048535 260 GLAKMHHHGQVMS----GRRPI--------EEGKRNLVDRMWSLT--------------ERSELLSVLDERL-KAKGGYA 312 (409)
Q Consensus 260 Gla~~~~~~~~~~----g~~p~--------~~~~~~~~~~vws~~--------------~~~~~~~~~~~~l-~~~~~~~ 312 (409)
||||.+...++.. +..|. ..+.++.++|+|+++ ....-.+++..-+ ...-+.+
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P 926 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPP 926 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCC
Confidence 9999554433221 12222 236677788888872 1111122222111 1123567
Q ss_pred HHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCC
Q 048535 313 DEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEG 350 (409)
Q Consensus 313 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 350 (409)
..++..+.+|+..||+.+|++||++..+++.+..+...
T Consensus 927 ~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 927 SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 77888999999999999999999999999988776544
No 24
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-36 Score=278.62 Aligned_cols=269 Identities=20% Similarity=0.313 Sum_probs=199.4
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEec--cCChHHHHHHHHHHHHhccCCCCceeeEeeEEEc----cC
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRIS--LDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKK----EK 181 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~--~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~ 181 (409)
.....|...+.||+|+||.|+.+... |+.||||++. .+.....++-.+|+.+|+.++|+||+.+++.+.. .-
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 34456666789999999999999987 9999999997 4566677889999999999999999999998865 23
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccC
Q 048535 182 ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGL 261 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 261 (409)
..+|+|+|+|+. +|.+.++ .+..|+.....-++.|+++||.|+| +.+|+||||||+|+|++.+...|||||||
T Consensus 99 ~DvYiV~elMet-DL~~iik---~~~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 99 NDVYLVFELMET-DLHQIIK---SQQDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred ceeEEehhHHhh-HHHHHHH---cCccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccc
Confidence 469999999955 9999994 3445999999999999999999999 89999999999999999999999999999
Q ss_pred cccccC---Cceeeecccc----------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccC
Q 048535 262 AKMHHH---GQVMSGRRPI----------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAH 328 (409)
Q Consensus 262 a~~~~~---~~~~~g~~p~----------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~ 328 (409)
||.... ...+|+.... ....|+...|+|+.+ +.+.+++..+..+.+.-..+....+.+ .+=.
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvG--CI~AEmL~gkplFpG~d~v~Ql~lI~~---~lGt 246 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVG--CILAEMLTGKPLFPGKDYVHQLQLILE---LLGT 246 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhh--HHHHHHHcCCCCCCCCchHHHHHHHHH---hcCC
Confidence 998863 3333433222 136788899999997 566677666554444333333333222 2222
Q ss_pred cCCC--CCCCHHHHHHHHhcCcCCCCCC-------CCCcchhHHhhhcccCCCCcccccccCCCCCccccc
Q 048535 329 PEAN--SRPTIRQVLKMLEGQTEGTGLE-------DEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEIN 390 (409)
Q Consensus 329 ~dP~--~RPt~~evl~~L~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~ 390 (409)
++++ .+-+-..+...+++....+..+ ......+++++|+..||.+|+|.++++.||+++...
T Consensus 247 P~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~h 317 (359)
T KOG0660|consen 247 PSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYH 317 (359)
T ss_pred CCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhc
Confidence 2221 1222222222333332222211 112348999999999999999999999999988644
No 25
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=8.9e-35 Score=278.07 Aligned_cols=229 Identities=25% Similarity=0.424 Sum_probs=174.6
Q ss_pred hCCCCccceeecCCceEEEEEEEC------------------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceee
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL------------------GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVG 172 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~------------------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~ 172 (409)
.++|...+.||+|+||.||+|.+. +..||+|.+... ......+|.+|+.++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 357888999999999999999753 346999999765 3445678999999999999999999
Q ss_pred EeeEEEccCCeEEEEEEeCCCCCHHHHHhcCC----------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCce
Q 048535 173 LRGWCKKEKESLILIYDYMENGSLDKWIFECD----------------ESIALSWEQRIKVLKDVASGILYLYEGWESKV 236 (409)
Q Consensus 173 l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 236 (409)
+++++.+ .+..++||||+++|+|.+++.... ....+++..+.+++.||+.||.||| +.+|
T Consensus 84 ~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i 159 (304)
T cd05096 84 LLGVCVD-EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNF 159 (304)
T ss_pred EEEEEec-CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCc
Confidence 9999987 677899999999999999985421 1134788999999999999999999 8999
Q ss_pred eecCCCCCCeeeCCCCcEEEecccCcccccCCce--eeec-------ccc---ccCCCcHHHHHHhhhccCcHHHHhh--
Q 048535 237 LHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV--MSGR-------RPI---EEGKRNLVDRMWSLTERSELLSVLD-- 302 (409)
Q Consensus 237 vHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~--~~g~-------~p~---~~~~~~~~~~vws~~~~~~~~~~~~-- 302 (409)
+||||||+|||++.++.+||+|||+++....... .++. .+. ....++..+|+|+++. .+++++.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~--~l~el~~~~ 237 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGV--TLWEILMLC 237 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHH--HHHHHHHcc
Confidence 9999999999999999999999999986543221 1111 111 1245677889999741 1222111
Q ss_pred ---------------H---Hhhh-----cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 303 ---------------E---RLKA-----KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 303 ---------------~---~l~~-----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
. .+.. ....+..++..+.+++.+||+.||++|||+.++.+.|++
T Consensus 238 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 238 KEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 0 0000 001122344678999999999999999999999998863
No 26
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=264.59 Aligned_cols=244 Identities=22% Similarity=0.296 Sum_probs=194.2
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|+..+.||.|+||.|.+++.+ |.-+|+|+++.. ..++.+...+|..+|+.+.||.++++++.|.+ ...+|+|
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d-~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD-NSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc-CCeEEEE
Confidence 56888899999999999999987 889999999866 34456678899999999999999999999988 7899999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||.+||.|..++++ .+.+++..+..++.||+.||+||| +..|++|||||+|||||.+|.+||+|||+|+....
T Consensus 123 meyv~GGElFS~Lrk---~~rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRK---SGRFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred EeccCCccHHHHHHh---cCCCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 999999999999954 457999999999999999999999 89999999999999999999999999999998776
Q ss_pred Cc-eeeeccccc------cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHH
Q 048535 268 GQ-VMSGRRPIE------EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQV 340 (409)
Q Consensus 268 ~~-~~~g~~p~~------~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev 340 (409)
.+ .+||.+-+- ...++...|.|+++ --+++++....++. ..+| |.--
T Consensus 197 rT~TlCGTPeYLAPEii~sk~ynkavDWWalG--VLIYEMlaG~pPF~-----------------------~~~~-~~iY 250 (355)
T KOG0616|consen 197 RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALG--VLIYEMLAGYPPFY-----------------------DDNP-IQIY 250 (355)
T ss_pred cEEEecCCccccChHHhhcCCCCcchhHHHHH--HHHHHHHcCCCCCc-----------------------CCCh-HHHH
Confidence 54 677776543 25677888999986 23444444333211 1222 4444
Q ss_pred HHHHhcCcCCCCCCCCCcchhHHhhhcccCCCCccc-----ccccCCCCCccccc
Q 048535 341 LKMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWK-----FAGSRGHPTFNEIN 390 (409)
Q Consensus 341 l~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~hp~~~~~~ 390 (409)
-+.+++....|..-.+ ...||+.++++.|-++|.. ..++..||||++++
T Consensus 251 ~KI~~~~v~fP~~fs~-~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 251 EKILEGKVKFPSYFSS-DAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred HHHHhCcccCCcccCH-HHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 4555665555544333 2367777777777777743 45789999999876
No 27
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-35 Score=275.96 Aligned_cols=231 Identities=23% Similarity=0.318 Sum_probs=171.5
Q ss_pred CCCCccceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhc--cCCCCceeeEeeEEEcc---CCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLG--RLKHRNLVGLRGWCKKE---KESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~--~l~H~niv~l~g~~~~~---~~~~~lv 187 (409)
...+..+.||+|+||.||||.+.++.||||++.. +..+.|.+|-++.+ .++|+||++++++-... ...++||
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred CchhhHHHhhcCccceeehhhccCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 4455668899999999999999999999999974 44567888877765 45899999999876541 2368999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc------CCCceeecCCCCCCeeeCCCCcEEEecccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEG------WESKVLHRDIKASNVLLDKKMNARLGDFGL 261 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 261 (409)
+||.++|||.+||.. ..++|....+|+.-+++||+|||+. +.++|+|||||++|||+.+|+++.|+||||
T Consensus 287 t~fh~kGsL~dyL~~----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKA----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred eeeccCCcHHHHHHh----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 999999999999943 4699999999999999999999974 467899999999999999999999999999
Q ss_pred cccccCCc------------------eeeecccccc-------CCCcHHHHHHhhhccCcHH------------------
Q 048535 262 AKMHHHGQ------------------VMSGRRPIEE-------GKRNLVDRMWSLTERSELL------------------ 298 (409)
Q Consensus 262 a~~~~~~~------------------~~~g~~p~~~-------~~~~~~~~vws~~~~~~~~------------------ 298 (409)
|..+..+. ++-|...+.. +.|.+.--+|++..+....
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 98876543 2222222221 2222233345553332211
Q ss_pred --------H-HhhHHhhhcCCCCHH-----HHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCCCC
Q 048535 299 --------S-VLDERLKAKGGYADE-----VVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEGTG 352 (409)
Q Consensus 299 --------~-~~~~~l~~~~~~~~~-----~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~ 352 (409)
+ ++.++.+ +.++.. .+.-+.+.+..||+.||+.|-|+.=|.+++.++....+
T Consensus 443 hPt~e~mq~~VV~kK~R--P~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQR--PKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred CCCHHHHHHHHHhhccC--CCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 0 1111111 233332 24567889999999999999999999888877665543
No 28
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-36 Score=278.69 Aligned_cols=260 Identities=22% Similarity=0.290 Sum_probs=199.0
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCC----eEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE----SLILI 187 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~lv 187 (409)
.|...+++|.|+||.||+|... ++.||||++-.+.. ---+|+.+|++++|||||+++-+|....+ ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 3556789999999999999987 78999999965532 12269999999999999999988865332 35689
Q ss_pred EEeCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC-CcEEEecccCcccc
Q 048535 188 YDYMENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK-MNARLGDFGLAKMH 265 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~-~~~kl~DFGla~~~ 265 (409)
|||||. +|.++++.. ..+..++...+.-+..||.+||.||| ..+|+||||||.|+|+|.+ |.+||||||.|+..
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999999 999998642 23456888888899999999999999 8999999999999999987 89999999999987
Q ss_pred cCCc----eeeecc--cc----ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCC
Q 048535 266 HHGQ----VMSGRR--PI----EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRP 335 (409)
Q Consensus 266 ~~~~----~~~g~~--p~----~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 335 (409)
..++ +.+.+. |. ....|+...|+||.+ +.+.+++-++.-+.++...+...++.++. -.|
T Consensus 177 ~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaG--CV~aELl~g~plFpG~s~~dQL~eIik~l---------G~P 245 (364)
T KOG0658|consen 177 VKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAG--CVMAELLKGQPLFPGDSSVDQLVEIIKVL---------GTP 245 (364)
T ss_pred ccCCCceeEEEeccccCHHHHcCccccCceeEEhhhh--HHHHHHhcCCcccCCCCHHHHHHHHHHHh---------CCC
Confidence 7655 333322 22 236778889999997 66777777766665666666665555543 467
Q ss_pred CHHHHHHHHhcC--cCCCCC-----------CCCCcchhHHhhhcccCCCCcccccccCCCCCccccccc
Q 048535 336 TIRQVLKMLEGQ--TEGTGL-----------EDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINKN 392 (409)
Q Consensus 336 t~~evl~~L~~~--~~~~~~-----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~~ 392 (409)
|-+++-.|--+. .+.+.. ..+....+++.+++.++|.+|.+..+++.||||++....
T Consensus 246 t~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 246 TREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred CHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 777777665441 111111 111234899999999999999999999999999987643
No 29
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.2e-35 Score=269.44 Aligned_cols=266 Identities=22% Similarity=0.266 Sum_probs=196.3
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChH--HHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCeEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEH--GMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KESLIL 186 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~~l 186 (409)
.++|+..+.|++|.||.||+|+++ ++.||+|+++.+... .--.-++||.+|.+++|||||.+-.+.... -+.+|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 356888899999999999999998 889999999866321 112357999999999999999998876532 356999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
|||||+. ||..++..- .+++...++.-++.|+++|++||| .+.|+|||||++|+|++..|.+||+||||||.+.
T Consensus 155 VMe~~Eh-DLksl~d~m--~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETM--KQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eHHHHHh-hHHHHHHhc--cCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhc
Confidence 9999988 999999653 367999999999999999999999 8999999999999999999999999999999877
Q ss_pred CCc------eee-ecccc----ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCC
Q 048535 267 HGQ------VMS-GRRPI----EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRP 335 (409)
Q Consensus 267 ~~~------~~~-g~~p~----~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 335 (409)
... ++| =+++. ....|+...|+|+++ +.+.+++.......+....+.... +....-.++-+.=|
T Consensus 229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvG--CI~aE~l~~kPlf~G~sE~dQl~~---If~llGtPte~iwp 303 (419)
T KOG0663|consen 229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVG--CIFAELLTQKPLFPGKSEIDQLDK---IFKLLGTPSEAIWP 303 (419)
T ss_pred CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHH--HHHHHHHhcCCCCCCCchHHHHHH---HHHHhCCCccccCC
Confidence 642 111 12222 235678889999997 455555554443334433344333 33333344433344
Q ss_pred CHHHHH------------HHHhcCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCccccc
Q 048535 336 TIRQVL------------KMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEIN 390 (409)
Q Consensus 336 t~~evl------------~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~ 390 (409)
-+.++- ..|++.- +...-....++++..++..+|.+|+|+.+++.|+||.+.+
T Consensus 304 g~~~lp~~k~~~f~~~pyn~lr~kF--~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P 368 (419)
T KOG0663|consen 304 GYSELPAVKKMTFSEHPYNNLRKKF--GALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP 368 (419)
T ss_pred CccccchhhccccCCCCchhhhhhc--cccccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence 444332 1222211 1111223568999999999999999999999999999854
No 30
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-35 Score=276.73 Aligned_cols=248 Identities=23% Similarity=0.270 Sum_probs=182.1
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCCh--------------HHHHHHHHHHHHhccCCCCceeeEe
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSE--------------HGMREFLAEVSSLGRLKHRNLVGLR 174 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~--------------~~~~~~~~E~~~l~~l~H~niv~l~ 174 (409)
..+.|++.+.||+|.||.|-+|+.. ++.||||++..... ...+...+||.+|++++|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 3578999999999999999999987 89999999964310 1135788999999999999999999
Q ss_pred eEEEcc-CCeEEEEEEeCCCCCHHHHHhcCCCCCC-CCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC
Q 048535 175 GWCKKE-KESLILIYDYMENGSLDKWIFECDESIA-LSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM 252 (409)
Q Consensus 175 g~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~ 252 (409)
.+..+. .+.+|||+|||..|.+...= ...+ +++.++++++.++..||+||| .++||||||||+|+||+++|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCC
Confidence 987653 35799999999999886532 2334 999999999999999999999 89999999999999999999
Q ss_pred cEEEecccCcccccCCc---------eeeecccccc----------CCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCH
Q 048535 253 NARLGDFGLAKMHHHGQ---------VMSGRRPIEE----------GKRNLVDRMWSLTERSELLSVLDERLKAKGGYAD 313 (409)
Q Consensus 253 ~~kl~DFGla~~~~~~~---------~~~g~~p~~~----------~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~ 313 (409)
++||+|||.+.....+. ...|.+.+.. ...+...|+|+++ -.++.++-..+++.++
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalG--VTLYCllfG~~PF~~~--- 322 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALG--VTLYCLLFGQLPFFDD--- 322 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhh--hhHHHhhhccCCcccc---
Confidence 99999999998663221 2334443321 1235778999997 4566666666543222
Q ss_pred HHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCccccc
Q 048535 314 EVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEIN 390 (409)
Q Consensus 314 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~ 390 (409)
...+..-+++ .+|-.=|+..++- ....|++.+|+..||..|++..++-.|||.+.-.
T Consensus 323 ~~~~l~~KIv-----n~pL~fP~~pe~~---------------e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g 379 (576)
T KOG0585|consen 323 FELELFDKIV-----NDPLEFPENPEIN---------------EDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDG 379 (576)
T ss_pred hHHHHHHHHh-----cCcccCCCccccc---------------HHHHHHHHHHhhcChhheeehhhheecceeccCC
Confidence 2222222222 1333333332221 1236788888888888888888888888877653
No 31
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=282.00 Aligned_cols=225 Identities=23% Similarity=0.340 Sum_probs=180.9
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC----Ch-HHHHHHHHHHHHhccCC-CCceeeEeeEEEccC
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD----SE-HGMREFLAEVSSLGRLK-HRNLVGLRGWCKKEK 181 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~----~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~ 181 (409)
...++|...+.||+|+||.|+.|... +..||+|.+... .. ...+.+.+|+.++++++ ||||++++.++.. .
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t-~ 92 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT-P 92 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec-C
Confidence 34578999999999999999999886 899999977653 11 23445668999999998 9999999999988 6
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC-CcEEEeccc
Q 048535 182 ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK-MNARLGDFG 260 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~-~~~kl~DFG 260 (409)
..+++||||+.+|+|.+++.+ ...+.+..+..++.|++.|++|+| +++|+||||||+|||++.+ +++||+|||
T Consensus 93 ~~~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 93 TKIYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred CeEEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 679999999999999999954 467999999999999999999999 8999999999999999999 999999999
Q ss_pred Cccccc-CC---ceeeecccccc-------C-CCcHHHHHHhhh-------------ccCcHHHHhhHHhhhcCCCCHHH
Q 048535 261 LAKMHH-HG---QVMSGRRPIEE-------G-KRNLVDRMWSLT-------------ERSELLSVLDERLKAKGGYADEV 315 (409)
Q Consensus 261 la~~~~-~~---~~~~g~~p~~~-------~-~~~~~~~vws~~-------------~~~~~~~~~~~~l~~~~~~~~~~ 315 (409)
++.... .+ ...+|.+.+.. . ......|+|+++ .......+........-.++...
T Consensus 167 ~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~ 246 (370)
T KOG0583|consen 167 LSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYL 246 (370)
T ss_pred cccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCc
Confidence 999873 32 24556655532 2 225789999983 22222233333333223445555
Q ss_pred -HHHHHHHHHHccCcCCCCCCCHHHHH
Q 048535 316 -VEKVLHLGLLCAHPEANSRPTIRQVL 341 (409)
Q Consensus 316 -~~~l~~l~~~Cl~~dP~~RPt~~evl 341 (409)
..++..++.+|+..||.+|+|+.+++
T Consensus 247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 247 LSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 78889999999999999999999998
No 32
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=271.35 Aligned_cols=225 Identities=16% Similarity=0.233 Sum_probs=172.6
Q ss_pred cceeecCCceEEEEEEECCcEEEEEEeccCCh---HHHHHHHHHHHHhccCCCCceeeEeeEEEc--c-CCeEEEEEEeC
Q 048535 118 ENVIGLGGNGKVYKGQLLGVEVALKRISLDSE---HGMREFLAEVSSLGRLKHRNLVGLRGWCKK--E-KESLILIYDYM 191 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~-~~~~~lv~E~~ 191 (409)
...||+|++|.||+|.+.|+.||||+++.... ...+.|.+|+.+|++++||||++++|++.+ + ....++||||+
T Consensus 25 ~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 25 SVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred CeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 36799999999999999999999999975422 225778899999999999999999999865 2 34689999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce-
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV- 270 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~- 270 (409)
++|+|.+++.. ...+++....+++.|++.||.|||. ..+++||||||+|||+++++.+||+|||+++.......
T Consensus 105 ~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~ 179 (283)
T PHA02988 105 TRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFK 179 (283)
T ss_pred CCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccccc
Confidence 99999999954 3468999999999999999999993 24888999999999999999999999999986443211
Q ss_pred eeec---cccc-----cCCCcHHHHHHhhhc-------------cCcHHHHhhHHhhh--cCCCCHHHHHHHHHHHHHcc
Q 048535 271 MSGR---RPIE-----EGKRNLVDRMWSLTE-------------RSELLSVLDERLKA--KGGYADEVVEKVLHLGLLCA 327 (409)
Q Consensus 271 ~~g~---~p~~-----~~~~~~~~~vws~~~-------------~~~~~~~~~~~l~~--~~~~~~~~~~~l~~l~~~Cl 327 (409)
..|. .+.+ ...++..+|+|+++. .....++.+..... ....+...+..+.+++.+||
T Consensus 180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl 259 (283)
T PHA02988 180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACT 259 (283)
T ss_pred ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHh
Confidence 1111 1111 135677889998731 11112222221111 12233356678999999999
Q ss_pred CcCCCCCCCHHHHHHHHhcC
Q 048535 328 HPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 328 ~~dP~~RPt~~evl~~L~~~ 347 (409)
+.||++|||++|+++.|+..
T Consensus 260 ~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 260 SHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred cCCcccCcCHHHHHHHHHHH
Confidence 99999999999999999764
No 33
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4.9e-35 Score=288.31 Aligned_cols=233 Identities=24% Similarity=0.368 Sum_probs=176.5
Q ss_pred HHHhCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEc
Q 048535 109 HAATKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKK 179 (409)
Q Consensus 109 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 179 (409)
....++|+..+.||+|+||.||+|++. +..||||+++.. .....+.+.+|+.++..+ +||||++++++|..
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 344567999999999999999999752 457999999754 334456789999999999 89999999999987
Q ss_pred cCCeEEEEEEeCCCCCHHHHHhcCCC------------------------------------------------------
Q 048535 180 EKESLILIYDYMENGSLDKWIFECDE------------------------------------------------------ 205 (409)
Q Consensus 180 ~~~~~~lv~E~~~~gsL~~~l~~~~~------------------------------------------------------ 205 (409)
.+..++|||||++|+|.+++.....
T Consensus 111 -~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 111 -GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred -CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 6788999999999999999864211
Q ss_pred ------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 206 ------------------SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 206 ------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
...+++..+.+++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRN 266 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccC
Confidence 125789999999999999999999 89999999999999999999999999999986543
Q ss_pred Cc--eeee-------ccccc---cCCCcHHHHHHhhhccCcHHHHhh-HH---------------hhh--cCCCCHHHHH
Q 048535 268 GQ--VMSG-------RRPIE---EGKRNLVDRMWSLTERSELLSVLD-ER---------------LKA--KGGYADEVVE 317 (409)
Q Consensus 268 ~~--~~~g-------~~p~~---~~~~~~~~~vws~~~~~~~~~~~~-~~---------------l~~--~~~~~~~~~~ 317 (409)
.. ...| ..+.+ ...++..+|+|+++ ..+++++. .. +.. ....+.....
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG--~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG--ILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPS 344 (375)
T ss_pred cccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHH--HHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCH
Confidence 22 1111 11111 23456677888873 12222221 00 000 0111222346
Q ss_pred HHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 318 KVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 318 ~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
++.+++.+||+.||++|||+.|++++|++.
T Consensus 345 ~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 345 EMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 789999999999999999999999999863
No 34
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.8e-34 Score=270.68 Aligned_cols=227 Identities=24% Similarity=0.395 Sum_probs=177.1
Q ss_pred CCCCccceeecCCceEEEEEEEC-----CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-----GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
++|++.+.||+|+||.||+|.+. +..||+|.++.. .......|.+|+..+.+++||||++++|++.. ++..++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~l 83 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR-GNTMMI 83 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec-CCCcEE
Confidence 56888999999999999999864 568999999765 33445679999999999999999999999887 678999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
||||+++|+|.+++... ...+++..++.++.|++.||+||| +.+++||||||+|||++.++.+|++|||.+....
T Consensus 84 v~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 84 VTEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 99999999999999643 346899999999999999999999 8999999999999999999999999999876543
Q ss_pred CCcee---ee-----cccc---ccCCCcHHHHHHhhhccCcHHHHh----------------hHHhh-hcCCCCHHHHHH
Q 048535 267 HGQVM---SG-----RRPI---EEGKRNLVDRMWSLTERSELLSVL----------------DERLK-AKGGYADEVVEK 318 (409)
Q Consensus 267 ~~~~~---~g-----~~p~---~~~~~~~~~~vws~~~~~~~~~~~----------------~~~l~-~~~~~~~~~~~~ 318 (409)
..... .+ ..+. ....++..+|+|+++ ..+++++ ..... .....+..++..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFG--IVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNL 236 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHH--HHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHH
Confidence 22111 11 1111 224566788999873 1122211 11000 011233445678
Q ss_pred HHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 319 VLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 319 l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
+.+++..||+.+|++|||+.++.+.|++.
T Consensus 237 ~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 237 LHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 89999999999999999999999998764
No 35
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.3e-35 Score=286.61 Aligned_cols=241 Identities=25% Similarity=0.361 Sum_probs=191.1
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
++|.+.+.||+|+||.||||+.+ .+.||+|.+.+. ..+..+.+.+|++++++++|||||.++++|.. ..++++|+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt-~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFET-SAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcc-cceEEEEe
Confidence 56888899999999999999887 788999999755 55677889999999999999999999999987 78899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
|||.+ +|..+|. ....++++++..++.|++.||.||| +.+|+|||+||.|||++..+.+|+||||+||.+...
T Consensus 81 e~a~g-~L~~il~---~d~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~ 153 (808)
T KOG0597|consen 81 EYAVG-DLFTILE---QDGKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN 153 (808)
T ss_pred hhhhh-hHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcccC
Confidence 99987 9999994 4567999999999999999999999 899999999999999999999999999999988776
Q ss_pred cee----eeccc------cccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 048535 269 QVM----SGRRP------IEEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIR 338 (409)
Q Consensus 269 ~~~----~g~~p------~~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 338 (409)
+.+ .|.+- .+...|+..+|+|+++ ..+++...++. ++ +...+.+|+..-+. ||-+-|+
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslG--cilYE~~~G~P----PF---~a~si~~Lv~~I~~-d~v~~p~-- 221 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLG--CILYELYVGQP----PF---YARSITQLVKSILK-DPVKPPS-- 221 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHH--HHHHHHhcCCC----Cc---hHHHHHHHHHHHhc-CCCCCcc--
Confidence 522 23322 3457789999999997 55565544332 22 22333333333222 3333332
Q ss_pred HHHHHHhcCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCccc
Q 048535 339 QVLKMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNE 388 (409)
Q Consensus 339 evl~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~ 388 (409)
........+++.++..||.+|++-.+.+.|||.++
T Consensus 222 ---------------~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 222 ---------------TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKG 256 (808)
T ss_pred ---------------cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhh
Confidence 11112367889999999999999999999998664
No 36
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-34 Score=268.67 Aligned_cols=263 Identities=24% Similarity=0.359 Sum_probs=196.7
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChH--HHHHHHHHHHHhccCCCCc-eeeEeeEEEccCC-----
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEH--GMREFLAEVSSLGRLKHRN-LVGLRGWCKKEKE----- 182 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~~----- 182 (409)
..|...++||+|.||+||+|+.. |+.||+|+++..... ......+|+.+|+.++|+| ||++++++.....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 34666788999999999999987 899999999876332 2345689999999999999 9999999987443
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccC
Q 048535 183 SLILIYDYMENGSLDKWIFECDES-IALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGL 261 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 261 (409)
.+++|+||++. +|.+|+...... ..++...+..++.||++||+||| +++|+||||||.||||+++|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccch
Confidence 89999999977 999999764322 45777899999999999999999 89999999999999999999999999999
Q ss_pred cccccCCc------eeee-ccccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcC
Q 048535 262 AKMHHHGQ------VMSG-RRPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPE 330 (409)
Q Consensus 262 a~~~~~~~------~~~g-~~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~d 330 (409)
|+...... +.|+ .+|.+ ...|+...|+|+++ +.+.+++..+..+.+..+.+ .+..+-...=.++
T Consensus 167 Ara~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~G--cIfaEm~~~~~LFpG~se~~---ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 167 ARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLG--CIFAEMFTRRPLFPGDSEID---QLFRIFRLLGTPN 241 (323)
T ss_pred HHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHH--HHHHHHHhCCCCCCCCcHHH---HHHHHHHHcCCCC
Confidence 99765322 2332 23322 23577788999997 56667766554444444433 3333333333333
Q ss_pred CCCCCC----------------HHHHHHHHhcCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCccccccc
Q 048535 331 ANSRPT----------------IRQVLKMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINKN 392 (409)
Q Consensus 331 P~~RPt----------------~~evl~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~~ 392 (409)
.+.=|. ...+...+.... ....+++.+|+.++|.+|++.+.++.||+|.+.+..
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~--------~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLD--------PDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred ccCCCCccccccccccCcCCCCccchHHhccccC--------ccHHHHHHHHhccCcccCcCHHHHhcChhhcccccc
Confidence 333332 333333322211 245899999999999999999999999999998633
No 37
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=7.6e-34 Score=311.83 Aligned_cols=228 Identities=24% Similarity=0.402 Sum_probs=171.7
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
...|+..+.||+|+||.||+|+.. +..||||++...... ...|++.+++++|||||+++|+|.+ .+..++|||
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~-~~~~~lv~E 763 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRS-EKGAYLIHE 763 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEc-CCCCEEEEe
Confidence 356788899999999999999975 899999998644221 2356889999999999999999987 667899999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|.++++ .++|..+.+++.|+|+||+|||+.++++|+||||||+||+++.++.+++. ||.+.......
T Consensus 764 y~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~ 836 (968)
T PLN00113 764 YIEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDT 836 (968)
T ss_pred CCCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCC
Confidence 999999999994 38999999999999999999998778899999999999999999988876 66655432221
Q ss_pred eeee---cccc---ccCCCcHHHHHHhhh-------ccC------------------------cHHHHhhHHhhhcCCCC
Q 048535 270 VMSG---RRPI---EEGKRNLVDRMWSLT-------ERS------------------------ELLSVLDERLKAKGGYA 312 (409)
Q Consensus 270 ~~~g---~~p~---~~~~~~~~~~vws~~-------~~~------------------------~~~~~~~~~l~~~~~~~ 312 (409)
...| ..+. ....++..+|||+++ ... .....+|+.+......+
T Consensus 837 ~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (968)
T PLN00113 837 KCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVN 916 (968)
T ss_pred CccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCcc
Confidence 1111 1111 123455667777762 100 01111222222112334
Q ss_pred HHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCCC
Q 048535 313 DEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEGT 351 (409)
Q Consensus 313 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 351 (409)
.....++.+++.+||+.||++||||+|+++.|++.....
T Consensus 917 ~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 917 QNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred HHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 566678899999999999999999999999999876543
No 38
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=9.1e-35 Score=271.84 Aligned_cols=221 Identities=28% Similarity=0.453 Sum_probs=167.3
Q ss_pred ccceeecCCceEEEEEEEC------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 117 EENVIGLGGNGKVYKGQLL------GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 117 ~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
..+.||.|.||.||+|.+. +..|+||.++.. .....+.|.+|++.+++++||||++++|+|.. .+..++|||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-~~~~~lv~e 81 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-NEPLFLVME 81 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES-SSSEEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccc-ccccccccc
Confidence 3578999999999999987 678999999654 44557899999999999999999999999996 667899999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|.++|... ....+++..+..|+.||++||.||| +.+++|+||+++|||+++++.+||+|||+++......
T Consensus 82 ~~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 82 YCPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp --TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred cccccccccccccc-ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence 99999999999764 2456999999999999999999999 7899999999999999999999999999998763221
Q ss_pred ee------eec---ccc---ccCCCcHHHHHHhhhccCcHHHHhh----------------HHhh-hcCCCCHHHHHHHH
Q 048535 270 VM------SGR---RPI---EEGKRNLVDRMWSLTERSELLSVLD----------------ERLK-AKGGYADEVVEKVL 320 (409)
Q Consensus 270 ~~------~g~---~p~---~~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~-~~~~~~~~~~~~l~ 320 (409)
.. ... .+. ....++..+|||+++ -.+++++. .... .....+..+...+.
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG--~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFG--MLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIY 235 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHH--HHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHH
T ss_pred ccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccceeccchhHHHH
Confidence 00 000 111 124467889999873 11122111 1111 01223444566789
Q ss_pred HHHHHccCcCCCCCCCHHHHHHHH
Q 048535 321 HLGLLCAHPEANSRPTIRQVLKML 344 (409)
Q Consensus 321 ~l~~~Cl~~dP~~RPt~~evl~~L 344 (409)
+++..||+.||++|||+.++++.|
T Consensus 236 ~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 236 SLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHHcCCChhhCcCHHHHHhcC
Confidence 999999999999999999999876
No 39
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-34 Score=268.49 Aligned_cols=226 Identities=24% Similarity=0.360 Sum_probs=180.7
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCCh-HHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSE-HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
.+.|+..+.||.|..++||+|... ++.||||++..+.. ...+.+.+|+..|+.++||||++++..|.. +..+|+||
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv-~~~LWvVm 103 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVV-DSELWVVM 103 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEe-cceeEEee
Confidence 477899999999999999999987 89999999987633 346889999999999999999999998887 78999999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC-
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH- 267 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~- 267 (409)
.||.+||+.+.++..-. ..+++..+..|.+++++||.||| .+|.||||||+.||||+++|.+||+|||.+..+..
T Consensus 104 pfMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred hhhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 99999999999976533 34999999999999999999999 89999999999999999999999999998754332
Q ss_pred Cc-------eeeeccccc--------cCCCcHHHHHHhhhcc-------------CcHHHHhhHHhhhcCC------CCH
Q 048535 268 GQ-------VMSGRRPIE--------EGKRNLVDRMWSLTER-------------SELLSVLDERLKAKGG------YAD 313 (409)
Q Consensus 268 ~~-------~~~g~~p~~--------~~~~~~~~~vws~~~~-------------~~~~~~~~~~l~~~~~------~~~ 313 (409)
+. ...|.+++. ...|++++|+|+++-. -...+++-..+...++ .+.
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~ 259 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDK 259 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCCh
Confidence 21 223444432 2578999999998421 1122333333332221 112
Q ss_pred ----HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 314 ----EVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 314 ----~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.....+.+++..|++.||.+|||++++++
T Consensus 260 d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 260 DEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 23457889999999999999999999985
No 40
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-34 Score=290.42 Aligned_cols=240 Identities=24% Similarity=0.322 Sum_probs=186.2
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCC-CCceeeEee-EEEcc---C--
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLK-HRNLVGLRG-WCKKE---K-- 181 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g-~~~~~---~-- 181 (409)
...++++.+.|.+|||+.||++... |..||+|++-..+....+.+.+|+++|++|. |+|||.+++ ..... .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 3456677899999999999999998 4899999998778888999999999999995 999999999 33221 1
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccC
Q 048535 182 ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGL 261 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 261 (409)
-+++|.||||.+|+|-+++...- ...|++.++++|+.|+++|+++||.. ..+|||||||-+||||+.++..||||||.
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rl-q~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRL-QTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHH-hccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 25789999999999999997532 34599999999999999999999965 67899999999999999999999999999
Q ss_pred cccccCCc-----------------eeeeccc-----cccCCCcHHHHHHhhh-------------ccCcHHHHhhHHhh
Q 048535 262 AKMHHHGQ-----------------VMSGRRP-----IEEGKRNLVDRMWSLT-------------ERSELLSVLDERLK 306 (409)
Q Consensus 262 a~~~~~~~-----------------~~~g~~p-----~~~~~~~~~~~vws~~-------------~~~~~~~~~~~~l~ 306 (409)
|....... ..+-+.| +.....+.++|+|.++ +......+++....
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~ 272 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYS 272 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEecccc
Confidence 86432110 1111112 1123457889999984 11112334444433
Q ss_pred hcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCCCCCC
Q 048535 307 AKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEGTGLE 354 (409)
Q Consensus 307 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~~ 354 (409)
. +..+.....+.+||..||++||++||++-||+..+-.+...+.+-
T Consensus 273 ~--P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~ 318 (738)
T KOG1989|consen 273 F--PPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPI 318 (738)
T ss_pred C--CCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCc
Confidence 2 223578889999999999999999999999999887766544433
No 41
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4.6e-34 Score=271.63 Aligned_cols=245 Identities=18% Similarity=0.212 Sum_probs=178.2
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|+..+.||+|+||.||+|... ++.||+|++... .....+.+.+|+.++++++||||+++++++.+ ....++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD-QRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc-CCeEEEE
Confidence 46888999999999999999987 899999999643 22345678899999999999999999998887 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++|+|.+++.. ...+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 80 MEYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred EeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 999999999999954 346899999999999999999999 89999999999999999999999999999986543
Q ss_pred Cc-eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHH
Q 048535 268 GQ-VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQV 340 (409)
Q Consensus 268 ~~-~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev 340 (409)
.. ...|...+ ....++...|+|+++ ..+++++........ .+..++
T Consensus 154 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG--~il~~l~~g~~pf~~-------------------------~~~~~~ 206 (291)
T cd05612 154 RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALG--ILIYEMLVGYPPFFD-------------------------DNPFGI 206 (291)
T ss_pred CcccccCChhhcCHHHHcCCCCCchhhHHHHH--HHHHHHHhCCCCCCC-------------------------CCHHHH
Confidence 32 12232222 123456778999986 334444433322111 111111
Q ss_pred HHHHh-cCcCCCCCCCCCcchhHHhhhcccCCCCccc-----ccccCCCCCccccccc
Q 048535 341 LKMLE-GQTEGTGLEDEGMNVHLLKRIGTRAMTSSWK-----FAGSRGHPTFNEINKN 392 (409)
Q Consensus 341 l~~L~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~hp~~~~~~~~ 392 (409)
.+.+. +..+.+... .....+++.+|+..+|.+|.+ .++++.||||..++..
T Consensus 207 ~~~i~~~~~~~~~~~-~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~ 263 (291)
T cd05612 207 YEKILAGKLEFPRHL-DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWD 263 (291)
T ss_pred HHHHHhCCcCCCccC-CHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHH
Confidence 11111 111111111 112357777777777777774 6788888888776543
No 42
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7.2e-34 Score=269.85 Aligned_cols=261 Identities=25% Similarity=0.340 Sum_probs=185.2
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
++|+..+.||+|+||.||+|... +..||+|.++... ......+.+|+.++++++||||+++++++.. ....++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHT-ERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcC-CCeEEEEEe
Confidence 56888999999999999999886 8899999997542 2234567899999999999999999999887 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++ +|.+++... ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~~~-~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 84 YLDS-DLKQYLDNC--GNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred CCCc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 9975 999988542 235789999999999999999999 8999999999999999999999999999997643221
Q ss_pred ----eeeec---cccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHcc-CcCCCCCCCH
Q 048535 270 ----VMSGR---RPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCA-HPEANSRPTI 337 (409)
Q Consensus 270 ----~~~g~---~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl-~~dP~~RPt~ 337 (409)
...|. .+.+ ...++...|+|+++ ..+++++.......... ..+....+..++ .+.++..|..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG--~~l~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVG--CILYEMATGRPMFPGST----VKEELHLIFRLLGTPTEETWPGI 231 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHH--HHHHHHHhCCCCCCCCC----HHHHHHHHHHHhCCCChHHhhcc
Confidence 01111 1111 13467789999996 44566665543322221 122222233333 2333333332
Q ss_pred HHHHHHHhcCcCC--------CCCCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 338 RQVLKMLEGQTEG--------TGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 338 ~evl~~L~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
....+.-+...+. ..+.-.....+++.+|+..+|.+|+|++++++||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 232 TSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred ccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 2211111000000 001112234899999999999999999999999998
No 43
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-35 Score=281.97 Aligned_cols=222 Identities=22% Similarity=0.350 Sum_probs=183.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
...|..-.+||+|+.|.||.+... ++.||||++........+-+++|+.+|+..+|+|||++++.|.. .+.+|+|||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv-~deLWVVME 350 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLV-GDELWVVME 350 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcc-cceeEEEEe
Confidence 456777889999999999999876 88899999987766666778999999999999999999998887 688999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
||++|+|.+.+. ...+++.++..|+.++++||+||| .++|+|||||.+|||++.+|.+||+|||++..+....
T Consensus 351 ym~ggsLTDvVt----~~~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 351 YMEGGSLTDVVT----KTRMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred ecCCCchhhhhh----cccccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 999999999983 345999999999999999999999 8999999999999999999999999999998766543
Q ss_pred ----eeeecccccc------CCCcHHHHHHhhhccCcHHHHhhHHhhhc------------------CCCCHHHHHHHHH
Q 048535 270 ----VMSGRRPIEE------GKRNLVDRMWSLTERSELLSVLDERLKAK------------------GGYADEVVEKVLH 321 (409)
Q Consensus 270 ----~~~g~~p~~~------~~~~~~~~vws~~~~~~~~~~~~~~l~~~------------------~~~~~~~~~~l~~ 321 (409)
.+.|.+++.. ..|+...|||+++ --..+++++..+.. -..++..+..+.+
T Consensus 424 ~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLG--IMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kd 501 (550)
T KOG0578|consen 424 SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLG--IMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKD 501 (550)
T ss_pred CccccccCCCCccchhhhhhcccCccccchhhh--hHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHH
Confidence 4556655432 5678899999995 22333333322111 1234556678899
Q ss_pred HHHHccCcCCCCCCCHHHHHHH
Q 048535 322 LGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
++.+||+.|+++||++.|+|+.
T Consensus 502 FL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 502 FLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HHHHHhhcchhcCCCHHHHhcC
Confidence 9999999999999999999863
No 44
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.9e-34 Score=275.20 Aligned_cols=247 Identities=20% Similarity=0.201 Sum_probs=186.6
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
..++|+..+.||+|+||.||+|+-+ |..+|+|++++. ...+.+....|-.+|...++|+||+|+-.|.+ ...+|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD-~~~LY 217 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD-KEYLY 217 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC-CCeeE
Confidence 4578999999999999999999887 999999999876 34456678899999999999999999988887 88999
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
|||||+||||+..+|. ....|++..+..++.+++.|++-|| +.|+|||||||+|+|||..|++||+||||+.-+
T Consensus 218 LiMEylPGGD~mTLL~---~~~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLM---RKDTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEEecCCccHHHHHH---hcCcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchh
Confidence 9999999999999994 4568999999999999999999999 899999999999999999999999999999643
Q ss_pred cCCc---------------------------------------------------eeeecccc------ccCCCcHHHHH
Q 048535 266 HHGQ---------------------------------------------------VMSGRRPI------EEGKRNLVDRM 288 (409)
Q Consensus 266 ~~~~---------------------------------------------------~~~g~~p~------~~~~~~~~~~v 288 (409)
.... -+.|.+-+ ....|+...|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 2210 01111111 11345666777
Q ss_pred HhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHH--HccCcCCCCCCCHHHHHHHHhcCcCCCCCCCCCcchhHHhhh
Q 048535 289 WSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGL--LCAHPEANSRPTIRQVLKMLEGQTEGTGLEDEGMNVHLLKRI 366 (409)
Q Consensus 289 ws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~--~Cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~~~~l~~~ 366 (409)
|+++ ..+++++-+..++..+.+.+. +.+|+. .||..-++.+.+ ....|++.++
T Consensus 372 WSLG--~ImyEmLvGyPPF~s~tp~~T---~rkI~nwr~~l~fP~~~~~s--------------------~eA~DLI~rl 426 (550)
T KOG0605|consen 372 WSLG--CIMYEMLVGYPPFCSETPQET---YRKIVNWRETLKFPEEVDLS--------------------DEAKDLITRL 426 (550)
T ss_pred HHHH--HHHHHHHhCCCCCCCCCHHHH---HHHHHHHhhhccCCCcCccc--------------------HHHHHHHHHH
Confidence 8876 445555544433322222222 333332 356655555544 2235666777
Q ss_pred cccCCCCccc---ccccCCCCCccccc
Q 048535 367 GTRAMTSSWK---FAGSRGHPTFNEIN 390 (409)
Q Consensus 367 ~~~~~~~~~~---~~~~~~hp~~~~~~ 390 (409)
+. ++..|.. .+++..||||+.|+
T Consensus 427 l~-d~~~RLG~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 427 LC-DPENRLGSKGAEEIKKHPFFKGVD 452 (550)
T ss_pred hc-CHHHhcCcccHHHHhcCCccccCC
Confidence 66 6666765 66999999999987
No 45
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3e-34 Score=282.62 Aligned_cols=233 Identities=24% Similarity=0.387 Sum_probs=177.4
Q ss_pred HHHhCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEc
Q 048535 109 HAATKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKK 179 (409)
Q Consensus 109 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 179 (409)
....++|+..+.||+|+||.||+|... +..||+|+++.. .......+.+|+.+++.+ +|+|||+++++|..
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~ 113 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH 113 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence 344567999999999999999999863 357999999754 334456789999999999 89999999999987
Q ss_pred cCCeEEEEEEeCCCCCHHHHHhcCC-------------------------------------------------------
Q 048535 180 EKESLILIYDYMENGSLDKWIFECD------------------------------------------------------- 204 (409)
Q Consensus 180 ~~~~~~lv~E~~~~gsL~~~l~~~~------------------------------------------------------- 204 (409)
.+..++|||||++|+|.+++....
T Consensus 114 -~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 114 -GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred -CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 678999999999999999985421
Q ss_pred ------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc--e
Q 048535 205 ------------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--V 270 (409)
Q Consensus 205 ------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--~ 270 (409)
....+++..+.+++.||+.||.||| +++|+||||||+|||+++++.+||+|||+++...... .
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~ 269 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV 269 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee
Confidence 1124788999999999999999999 8999999999999999999999999999998654322 1
Q ss_pred eee-------cccc---ccCCCcHHHHHHhhhccCcHHHHhh-HHh---------------hh--cCCCCHHHHHHHHHH
Q 048535 271 MSG-------RRPI---EEGKRNLVDRMWSLTERSELLSVLD-ERL---------------KA--KGGYADEVVEKVLHL 322 (409)
Q Consensus 271 ~~g-------~~p~---~~~~~~~~~~vws~~~~~~~~~~~~-~~l---------------~~--~~~~~~~~~~~l~~l 322 (409)
..+ ..+. ....++..+|+|+++ ..+++++. ... .. ....+...+..+.++
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG--vil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 347 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYG--ILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSI 347 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHH--HHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHH
Confidence 111 1111 124456778899874 12222221 110 00 011122235678999
Q ss_pred HHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 323 GLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
+.+||+.||.+|||+.+++++|+++
T Consensus 348 i~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 348 MKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHH
Confidence 9999999999999999999999864
No 46
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=8.7e-34 Score=281.13 Aligned_cols=233 Identities=23% Similarity=0.376 Sum_probs=178.3
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCC-CCceeeEeeEEEcc
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLD-SEHGMREFLAEVSSLGRLK-HRNLVGLRGWCKKE 180 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~ 180 (409)
...++|.+.+.||+|+||.||+|++. +..||||+++.. .....+.|.+|+++|+++. ||||++++++|.+
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~- 112 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK- 112 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc-
Confidence 34678899999999999999999864 246999999754 3344567999999999995 9999999999987
Q ss_pred CCeEEEEEEeCCCCCHHHHHhcCCC-------------------------------------------------------
Q 048535 181 KESLILIYDYMENGSLDKWIFECDE------------------------------------------------------- 205 (409)
Q Consensus 181 ~~~~~lv~E~~~~gsL~~~l~~~~~------------------------------------------------------- 205 (409)
.+..++|||||++|+|.++|.....
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 6789999999999999999864210
Q ss_pred --------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCee
Q 048535 206 --------------------------------------SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVL 247 (409)
Q Consensus 206 --------------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 247 (409)
...+++..+..++.|+++||.||| +.+|+||||||+|||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEE
Confidence 124788899999999999999999 899999999999999
Q ss_pred eCCCCcEEEecccCcccccCCcee--e----e---cccc---ccCCCcHHHHHHhhhccCcHHHHhh-------------
Q 048535 248 LDKKMNARLGDFGLAKMHHHGQVM--S----G---RRPI---EEGKRNLVDRMWSLTERSELLSVLD------------- 302 (409)
Q Consensus 248 l~~~~~~kl~DFGla~~~~~~~~~--~----g---~~p~---~~~~~~~~~~vws~~~~~~~~~~~~------------- 302 (409)
+++++.+||+|||+++........ . + ..+. ....++...|+|+++ ..+++++.
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlG--vil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYG--ILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHH--HHHHHHHHCCCCCCcccchhH
Confidence 999999999999999865332110 0 1 1111 124456778999874 12222211
Q ss_pred ---HHhhh--cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCc
Q 048535 303 ---ERLKA--KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQT 348 (409)
Q Consensus 303 ---~~l~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 348 (409)
..+.. ....+......+.+++.+||+.||++|||+.++.++|+...
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 348 TFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 01110 01223345667899999999999999999999999998654
No 47
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=5.1e-34 Score=266.22 Aligned_cols=233 Identities=26% Similarity=0.419 Sum_probs=182.3
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
++..+|+..+.||.|+||.||+|... +..+|+|.+..........+.+|+.+++.++||||+++++++.. ....++||
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~ 81 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSV-GEPVYIIT 81 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEec-CCCeEEEE
Confidence 34567888999999999999999988 78899999987666566789999999999999999999999987 67889999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
||+++|+|.+++... ....+++..+..++.|++.||.||| +.+|+|+||||+||++++++.+||+|||++......
T Consensus 82 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 82 ELMEKGSLLAFLRSP-EGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKED 157 (261)
T ss_pred eecccCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence 999999999999753 2356899999999999999999999 899999999999999999999999999999765433
Q ss_pred ceee-------ecccc---ccCCCcHHHHHHhhh-------ccC-------cHHHHhhHHhhh-cCCCCHHHHHHHHHHH
Q 048535 269 QVMS-------GRRPI---EEGKRNLVDRMWSLT-------ERS-------ELLSVLDERLKA-KGGYADEVVEKVLHLG 323 (409)
Q Consensus 269 ~~~~-------g~~p~---~~~~~~~~~~vws~~-------~~~-------~~~~~~~~~l~~-~~~~~~~~~~~l~~l~ 323 (409)
.... +..+. ....++..+|+|+++ ..+ ...+.+...... ....+...+..+.+++
T Consensus 158 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 237 (261)
T cd05148 158 VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIM 237 (261)
T ss_pred cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHH
Confidence 2110 11111 123456678999874 101 011111111110 1122344557789999
Q ss_pred HHccCcCCCCCCCHHHHHHHHhcC
Q 048535 324 LLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 324 ~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
.+||+.||.+|||++++++.|++.
T Consensus 238 ~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 238 LECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHcCCCchhCcCHHHHHHHHhcC
Confidence 999999999999999999999863
No 48
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.6e-33 Score=264.95 Aligned_cols=228 Identities=22% Similarity=0.392 Sum_probs=176.9
Q ss_pred CCCCccceeecCCceEEEEEEEC------CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCeEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL------GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KESLI 185 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~~ 185 (409)
++|++.+.||+|+||.||++... +..||+|.+........+.|.+|++++++++||||+++++++... ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 57888999999999999999752 778999999877666778899999999999999999999987642 34689
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
+||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++..
T Consensus 84 lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred EEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 999999999999999642 235899999999999999999999 899999999999999999999999999999865
Q ss_pred cCCce--ee---e-----cccc---ccCCCcHHHHHHhhhccCcHHHHhhH-----------------------------
Q 048535 266 HHGQV--MS---G-----RRPI---EEGKRNLVDRMWSLTERSELLSVLDE----------------------------- 303 (409)
Q Consensus 266 ~~~~~--~~---g-----~~p~---~~~~~~~~~~vws~~~~~~~~~~~~~----------------------------- 303 (409)
..... .. + ..+. ....++...|+|+++. .+++++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~--~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05081 159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGV--VLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLI 236 (284)
T ss_pred cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHH--HHHHHhhcCCcCCCcchhhhhhcccccccccchHHHH
Confidence 43221 00 0 1111 1244667889999741 11221110
Q ss_pred -Hhhh--cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 304 -RLKA--KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 304 -~l~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
.+.. ....+......+.+++.+||+.+|++|||+.|+++.|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 237 ELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0000 0011223346789999999999999999999999999864
No 49
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.5e-33 Score=271.60 Aligned_cols=185 Identities=26% Similarity=0.379 Sum_probs=149.8
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
.++|+..+.||+|+||.||++... +..||+|.+... .....+.+.+|+++|++++||||+++++++.. .+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 82 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICM 82 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEEEe
Confidence 367899999999999999999987 888999999765 34455779999999999999999999999987 67899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+ ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 83 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 83 EHMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 99999999999954 3458999999999999999999993 246999999999999999999999999999765332
Q ss_pred c--eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHH
Q 048535 269 Q--VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDER 304 (409)
Q Consensus 269 ~--~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~ 304 (409)
. ...|...+ ....++..+|+|+++ ..+++++..+
T Consensus 158 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG--~il~el~tg~ 199 (331)
T cd06649 158 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMG--LSLVELAIGR 199 (331)
T ss_pred ccccCCCCcCcCCHhHhcCCCCCchHhHHHHH--HHHHHHHhCC
Confidence 1 11222221 124467789999986 3444444433
No 50
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.6e-33 Score=269.33 Aligned_cols=269 Identities=22% Similarity=0.300 Sum_probs=187.7
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
.++|++.+.||+|+||.||+|... ++.||+|+++... ......+.+|+.+++.++||||+++++++.+ ....++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHT-KETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEec-CCeEEEEE
Confidence 468999999999999999999986 8899999997542 2223467889999999999999999999987 67899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
||++ ++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 83 EYVH-TDLCQYMDKH--PGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred ECCC-cCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 9996 5888888542 345899999999999999999999 899999999999999999999999999999754321
Q ss_pred c----eeeecc---ccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCH
Q 048535 269 Q----VMSGRR---PIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTI 337 (409)
Q Consensus 269 ~----~~~g~~---p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 337 (409)
. ...|.. +.+ ...++..+|+|+++ ..+++++.......+.. +....+..+...--.++....|..
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG--~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd07869 157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVG--CIFVEMIQGVAAFPGMK--DIQDQLERIFLVLGTPNEDTWPGV 232 (303)
T ss_pred CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHH--HHHHHHHhCCCCCCCCc--cHHHHHHHHHHHhCCCChhhccch
Confidence 1 011111 111 13456788999996 45566655444322211 111222222221122233333333
Q ss_pred HHHHHHHhcCcCC----------CCCCCCCcchhHHhhhcccCCCCcccccccCCCCCcccccc
Q 048535 338 RQVLKMLEGQTEG----------TGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINK 391 (409)
Q Consensus 338 ~evl~~L~~~~~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~ 391 (409)
...-......... ..........+++.+|+..+|.+|+|+.+++.||||+.++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCCh
Confidence 2211100000000 00001123468999999999999999999999999998753
No 51
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=9.8e-34 Score=272.48 Aligned_cols=229 Identities=24% Similarity=0.374 Sum_probs=175.4
Q ss_pred CCCCccceeecCCceEEEEEEEC--Cc----EEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GV----EVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~----~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
.+|+..+.||+|+||.||+|.+. +. .||+|.++.. .....++|.+|+.+++.++||||++++|+|.. ...+
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~--~~~~ 84 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQ 84 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC--CCce
Confidence 56889999999999999999874 33 4899999754 34556789999999999999999999999975 3567
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
+++||+++|+|.+++... ...+++..++.++.||+.||+||| +.+|+||||||+|||+++++.+||+|||+++..
T Consensus 85 ~v~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 85 LITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred eeeecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccc
Confidence 999999999999999653 345889999999999999999999 899999999999999999999999999999876
Q ss_pred cCCce-e--ee------cccc---ccCCCcHHHHHHhhhccCcHHHHhh-H--------------Hhhh--cCCCCHHHH
Q 048535 266 HHGQV-M--SG------RRPI---EEGKRNLVDRMWSLTERSELLSVLD-E--------------RLKA--KGGYADEVV 316 (409)
Q Consensus 266 ~~~~~-~--~g------~~p~---~~~~~~~~~~vws~~~~~~~~~~~~-~--------------~l~~--~~~~~~~~~ 316 (409)
..... . .+ ..+. ....++...|+|+++ ..+++++. . .+.. ....+..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG--v~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG--VTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 237 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHH--HHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCC
Confidence 53321 0 00 1111 124456678888874 11222211 0 0100 011122344
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCC
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEG 350 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 350 (409)
..+.+++..||+.+|++|||+.+++..|......
T Consensus 238 ~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 238 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 5788999999999999999999999998866543
No 52
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.4e-33 Score=259.45 Aligned_cols=219 Identities=24% Similarity=0.410 Sum_probs=170.9
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGS 195 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gs 195 (409)
+.||+|+||.||+|+.. ++.||+|.+... .......|.+|++++++++||||+++++++.. ....++||||+++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-KQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCeEEEEeeccCCc
Confidence 46999999999999985 889999988654 34455779999999999999999999999987 678899999999999
Q ss_pred HHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCceee---
Q 048535 196 LDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVMS--- 272 (409)
Q Consensus 196 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~--- 272 (409)
|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++........+
T Consensus 80 L~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 80 FLTFLRTE--GPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred HHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 99999542 345899999999999999999999 8999999999999999999999999999987644321100
Q ss_pred ------eccc---cccCCCcHHHHHHhhhccCcHHHHhh---------------HHhh--hcCCCCHHHHHHHHHHHHHc
Q 048535 273 ------GRRP---IEEGKRNLVDRMWSLTERSELLSVLD---------------ERLK--AKGGYADEVVEKVLHLGLLC 326 (409)
Q Consensus 273 ------g~~p---~~~~~~~~~~~vws~~~~~~~~~~~~---------------~~l~--~~~~~~~~~~~~l~~l~~~C 326 (409)
...+ .....++..+|+|+++ ..+++++. ..+. .....+...+..+.+++.+|
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG--~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 232 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFG--ILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERC 232 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHH--HHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHH
Confidence 0111 1224456778999973 11122111 0000 01223344567889999999
Q ss_pred cCcCCCCCCCHHHHHHHHh
Q 048535 327 AHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 327 l~~dP~~RPt~~evl~~L~ 345 (409)
|+.+|++|||+.+++++|+
T Consensus 233 l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 233 WEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cCCChhhCcCHHHHHHHHh
Confidence 9999999999999999986
No 53
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.3e-33 Score=260.13 Aligned_cols=226 Identities=30% Similarity=0.435 Sum_probs=179.7
Q ss_pred hCCCCccceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
.++|+..+.||+|+||.||+|...++.||+|.+..... ..+++.+|+.++++++|+||+++++++.+ ....++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-GNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcC-CCCeEEEEEec
Confidence 35788899999999999999999999999999976544 56789999999999999999999999987 67889999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM 271 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 271 (409)
++++|.+++... ....+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~- 157 (256)
T cd05039 83 AKGSLVDYLRSR-GRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD- 157 (256)
T ss_pred CCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccccc-
Confidence 999999999653 2236899999999999999999999 89999999999999999999999999999987643221
Q ss_pred eecc-----cc---ccCCCcHHHHHHhhhccCcHHHHhh---------------HHhh--hcCCCCHHHHHHHHHHHHHc
Q 048535 272 SGRR-----PI---EEGKRNLVDRMWSLTERSELLSVLD---------------ERLK--AKGGYADEVVEKVLHLGLLC 326 (409)
Q Consensus 272 ~g~~-----p~---~~~~~~~~~~vws~~~~~~~~~~~~---------------~~l~--~~~~~~~~~~~~l~~l~~~C 326 (409)
.+.. +. ....++...|+|+++. .+++++. ..+. .....+...+..+.+++.+|
T Consensus 158 ~~~~~~~~~ape~~~~~~~~~~~Di~slG~--il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 235 (256)
T cd05039 158 SGKLPVKWTAPEALREKKFSTKSDVWSFGI--LLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDC 235 (256)
T ss_pred cCCCcccccCchhhcCCcCCcHHHHHHHHH--HHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHH
Confidence 1111 11 1244556789999741 1112111 0110 01122334467889999999
Q ss_pred cCcCCCCCCCHHHHHHHHhc
Q 048535 327 AHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 327 l~~dP~~RPt~~evl~~L~~ 346 (409)
|+.+|++|||+.+++++|++
T Consensus 236 l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 236 WELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred hccChhhCcCHHHHHHHHhc
Confidence 99999999999999999975
No 54
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.7e-33 Score=264.61 Aligned_cols=228 Identities=24% Similarity=0.430 Sum_probs=176.9
Q ss_pred CCCCccceeecCCceEEEEEEEC--C-----cEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--G-----VEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESL 184 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~-----~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 184 (409)
++|+..+.||+|+||.||+|... + ..||+|.+... .......|.+|+.++.+++||||+++++++.. ....
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-~~~~ 83 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK-EQPT 83 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC-CCce
Confidence 46788899999999999999875 2 56999999754 34455679999999999999999999999886 6678
Q ss_pred EEEEEeCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC
Q 048535 185 ILIYDYMENGSLDKWIFECDE-------------SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK 251 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~ 251 (409)
+++|||+++|+|.+++..... ...+++..+..++.|++.||.||| +.+++||||||+||+++++
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCC
Confidence 999999999999999965321 145889999999999999999999 8999999999999999999
Q ss_pred CcEEEecccCcccccCCce--ee----e---cccc---ccCCCcHHHHHHhhhccCcHHHHhh---------------HH
Q 048535 252 MNARLGDFGLAKMHHHGQV--MS----G---RRPI---EEGKRNLVDRMWSLTERSELLSVLD---------------ER 304 (409)
Q Consensus 252 ~~~kl~DFGla~~~~~~~~--~~----g---~~p~---~~~~~~~~~~vws~~~~~~~~~~~~---------------~~ 304 (409)
+.+||+|||+++....... .. + ..+. ....++..+|+|+++ ..+++++. ..
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG--~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFG--VVLWEIFSYGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHH--HHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 9999999999976432210 00 0 1111 124556778999974 11222221 01
Q ss_pred hh--hcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 305 LK--AKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 305 l~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
+. .....+...+.++.+|+.+||+.||.+||+++|+++.|++
T Consensus 239 i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 239 IRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 10 0122344566789999999999999999999999999975
No 55
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.6e-33 Score=262.41 Aligned_cols=228 Identities=29% Similarity=0.481 Sum_probs=176.9
Q ss_pred hCCCCccceeecCCceEEEEEEEC-----CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL-----GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
.++|+..+.||+|+||.||+|.+. ...||||.++.. .......|.+|+.++++++||||+++++++.. .+..+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 81 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK-SRPVM 81 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEec-CCceE
Confidence 357888999999999999999885 347999998755 34455789999999999999999999999886 67789
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
++|||+++|+|.+++... ...+++..+..++.|++.||+||| +++|+|+||||+|||+++++.+||+|||+++..
T Consensus 82 iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 82 IITEYMENGSLDKFLREN--DGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEEcCCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 999999999999999653 236899999999999999999999 899999999999999999999999999999876
Q ss_pred cC--Cceee--ec-----ccc---ccCCCcHHHHHHhhhccCcHHH----------------HhhHHhhh-cCCCCHHHH
Q 048535 266 HH--GQVMS--GR-----RPI---EEGKRNLVDRMWSLTERSELLS----------------VLDERLKA-KGGYADEVV 316 (409)
Q Consensus 266 ~~--~~~~~--g~-----~p~---~~~~~~~~~~vws~~~~~~~~~----------------~~~~~l~~-~~~~~~~~~ 316 (409)
.. ....+ +. .+. ....++...|+|+++. .+++ ..+..... ..+.+...+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~--~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGI--VMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCP 234 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHH--HHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence 42 11111 11 111 1134456778888631 1111 11111110 112233456
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
..+.+++.+||+.+|++||++.++++.|++.
T Consensus 235 ~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 235 SALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 6889999999999999999999999999864
No 56
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=273.07 Aligned_cols=215 Identities=17% Similarity=0.220 Sum_probs=163.2
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|+..+.||+|+||.||+|+.. ++.||+|.+... .....+.+.+|+.++++++||||+++++++.+ .+..++|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD-ENRVYFL 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc-CCEEEEE
Confidence 57888999999999999999987 889999999653 22345678999999999999999999999987 7789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 97 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 97 LEFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred EcCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 999999999999954 346899999999999999999999 89999999999999999999999999999987654
Q ss_pred Cc-eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhh---------------hcCCCCHHHHHHHHHHHHH
Q 048535 268 GQ-VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLK---------------AKGGYADEVVEKVLHLGLL 325 (409)
Q Consensus 268 ~~-~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~---------------~~~~~~~~~~~~l~~l~~~ 325 (409)
.. ...|...+ ....++...|+|+++ ..+++++..... ....++......+.+++.+
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG--~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~ 248 (329)
T PTZ00263 171 RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMG--VLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKG 248 (329)
T ss_pred CcceecCChhhcCHHHHcCCCCCCcceeechH--HHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHH
Confidence 32 22233221 123345667888874 223333222111 1111222234456667777
Q ss_pred ccCcCCCCCCC
Q 048535 326 CAHPEANSRPT 336 (409)
Q Consensus 326 Cl~~dP~~RPt 336 (409)
||+.||.+||+
T Consensus 249 ~L~~dP~~R~~ 259 (329)
T PTZ00263 249 LLQTDHTKRLG 259 (329)
T ss_pred HhhcCHHHcCC
Confidence 77777777776
No 57
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.8e-33 Score=265.30 Aligned_cols=231 Identities=21% Similarity=0.365 Sum_probs=176.5
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK 181 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 181 (409)
..+++|+..+.||+|+||.||+|.+. +..||+|.+... ......+|.+|+.+++.++||||+++++++.+ .
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-~ 81 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-G 81 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC-C
Confidence 35678999999999999999999864 357999998644 33445679999999999999999999999876 6
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcE
Q 048535 182 ESLILIYDYMENGSLDKWIFECDE-------SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNA 254 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~ 254 (409)
...++||||+++|+|.+++..... ...+++..+..++.|++.||.||| +.+++||||||+|||+++++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCE
Confidence 788999999999999999865321 234688899999999999999999 8999999999999999999999
Q ss_pred EEecccCcccccCCceee---------eccccc---cCCCcHHHHHHhhhccCcHHHHhh----------------HHhh
Q 048535 255 RLGDFGLAKMHHHGQVMS---------GRRPIE---EGKRNLVDRMWSLTERSELLSVLD----------------ERLK 306 (409)
Q Consensus 255 kl~DFGla~~~~~~~~~~---------g~~p~~---~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~ 306 (409)
||+|||+++......... +..+.+ ...++...|+|+++. .+++++. ....
T Consensus 159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~--~l~el~~~~~~p~~~~~~~~~~~~~~~ 236 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV--VLWEIATLAEQPYQGMSNEQVLRFVME 236 (277)
T ss_pred EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHH--HHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 999999997653322110 011111 244567789999741 1122211 0000
Q ss_pred -hcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 307 -AKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 307 -~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
.....+......+.+++.+||+.||++|||+.|+++.|++
T Consensus 237 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 237 GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 0012233455678999999999999999999999999864
No 58
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.8e-33 Score=259.86 Aligned_cols=226 Identities=24% Similarity=0.381 Sum_probs=172.8
Q ss_pred CCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
++|+..+.||+|+||.||++.+. +..+|+|.+.... ....+|.+|+.++++++||||+++++++.. ....++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQ-QKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEcc-CCCEEEEEEcC
Confidence 45778899999999999999987 6689999986442 234678999999999999999999999887 67899999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM 271 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 271 (409)
++|+|.+++... ...+++..+..++.|++.||.||| +++|+||||||+||++++++.+||+|||+++........
T Consensus 82 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05114 82 ENGCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156 (256)
T ss_pred CCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence 999999998643 235899999999999999999999 899999999999999999999999999999865433221
Q ss_pred ee--------ccccc---cCCCcHHHHHHhhhcc-------C-------cHHHHhhHHhhh-cCCCCHHHHHHHHHHHHH
Q 048535 272 SG--------RRPIE---EGKRNLVDRMWSLTER-------S-------ELLSVLDERLKA-KGGYADEVVEKVLHLGLL 325 (409)
Q Consensus 272 ~g--------~~p~~---~~~~~~~~~vws~~~~-------~-------~~~~~~~~~l~~-~~~~~~~~~~~l~~l~~~ 325 (409)
.. ..+.+ ...++...|+|+++.. + ...+.+...... ....+......+.+++.+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~ 236 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYS 236 (256)
T ss_pred ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Confidence 11 11111 1345667899987410 1 011111111110 011122344578999999
Q ss_pred ccCcCCCCCCCHHHHHHHHh
Q 048535 326 CAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 326 Cl~~dP~~RPt~~evl~~L~ 345 (409)
||+.+|++|||+.++++.|.
T Consensus 237 c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 237 CWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HccCCcccCcCHHHHHHhhC
Confidence 99999999999999999873
No 59
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.8e-34 Score=269.02 Aligned_cols=223 Identities=23% Similarity=0.383 Sum_probs=173.4
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
..+|++.+.||+|.||.|-++... |+.||||.++.+ +.++.-.+.+|+++|+.|+||||++++.+|.. .+.+.|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFEN-kdKIvi 130 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFEN-KDKIVI 130 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcC-CceEEE
Confidence 356777789999999999999875 999999999866 55566678899999999999999999999987 789999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
||||..+|.|++|+.+ .+.|++.+..++++||..|+.|+| .++++|||||.+|||||.|+++||+||||+.++.
T Consensus 131 vMEYaS~GeLYDYiSe---r~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 131 VMEYASGGELYDYISE---RGSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEEecCCccHHHHHHH---hccccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhc
Confidence 9999999999999954 457999999999999999999999 8999999999999999999999999999998877
Q ss_pred CCc---eeeecccccc------CC-CcHHHHHHhhh-------------ccCcHHHHhhHHhhhcCCC-CHHHHHHHHHH
Q 048535 267 HGQ---VMSGRRPIEE------GK-RNLVDRMWSLT-------------ERSELLSVLDERLKAKGGY-ADEVVEKVLHL 322 (409)
Q Consensus 267 ~~~---~~~g~~p~~~------~~-~~~~~~vws~~-------------~~~~~~~~~~~~l~~~~~~-~~~~~~~l~~l 322 (409)
.+. ..||.+-+.. .. .....|-|+++ +..+...++...-. +.| .+..+....-|
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~--GaYrEP~~PSdA~gL 282 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISR--GAYREPETPSDASGL 282 (668)
T ss_pred cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhc--ccccCCCCCchHHHH
Confidence 654 2344332221 01 12234566663 11111122221111 111 22233445678
Q ss_pred HHHccCcCCCCCCCHHHHHHH
Q 048535 323 GLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~~ 343 (409)
+.+++-.||++|.|+.++...
T Consensus 283 IRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 283 IRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred HHHHHhcCcccchhHHHHhhh
Confidence 999999999999999999864
No 60
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.9e-33 Score=271.43 Aligned_cols=215 Identities=19% Similarity=0.262 Sum_probs=168.7
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMEN 193 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~ 193 (409)
+.||+|+||.||++... |+.||+|+++.. .......+.+|+.++++++||||+++++++.. .+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT-HDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc-CCEEEEEEeCCCC
Confidence 46999999999999986 899999999754 23345678899999999999999999999887 7789999999999
Q ss_pred CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC----c
Q 048535 194 GSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG----Q 269 (409)
Q Consensus 194 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~----~ 269 (409)
|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++..... .
T Consensus 80 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 153 (323)
T cd05571 80 GELFFHLSR---ERVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCccc
Confidence 999999853 346899999999999999999999 899999999999999999999999999999753221 1
Q ss_pred eeeeccccc------cCCCcHHHHHHhhhccCcHHHHh---------------hHHhhhcCCCCHHHHHHHHHHHHHccC
Q 048535 270 VMSGRRPIE------EGKRNLVDRMWSLTERSELLSVL---------------DERLKAKGGYADEVVEKVLHLGLLCAH 328 (409)
Q Consensus 270 ~~~g~~p~~------~~~~~~~~~vws~~~~~~~~~~~---------------~~~l~~~~~~~~~~~~~l~~l~~~Cl~ 328 (409)
...|...+. ...++...|+|+++ ..+++++ .........++......+.+++.+||+
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG--~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~ 231 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLG--VVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLK 231 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccc--hhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcc
Confidence 222333221 24456778999874 1222222 222221223444556788999999999
Q ss_pred cCCCCCC-----CHHHHHH
Q 048535 329 PEANSRP-----TIRQVLK 342 (409)
Q Consensus 329 ~dP~~RP-----t~~evl~ 342 (409)
.||++|| ++.++++
T Consensus 232 ~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 232 KDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCHHHcCCCCCCCHHHHHc
Confidence 9999999 7888875
No 61
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=9.2e-34 Score=275.31 Aligned_cols=233 Identities=24% Similarity=0.355 Sum_probs=177.6
Q ss_pred hCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCC
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKE 182 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 182 (409)
.++|++.+.||+|+||.||+|... ++.||+|+++.. .....+.+.+|+.++.++ +|+||++++++|.....
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 357888999999999999999753 368999999754 334456788999999999 89999999999887667
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCC---------------------------------------------------------
Q 048535 183 SLILIYDYMENGSLDKWIFECDE--------------------------------------------------------- 205 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~--------------------------------------------------------- 205 (409)
.++++|||+++|+|.+++.....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 89999999999999999864211
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc--eeee-------cc
Q 048535 206 -SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--VMSG-------RR 275 (409)
Q Consensus 206 -~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--~~~g-------~~ 275 (409)
...++|..+..++.||+.||+||| +.+|+||||||+|||+++++.+||+|||+++...... ...+ ..
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 126899999999999999999999 8999999999999999999999999999998653221 0000 11
Q ss_pred cc---ccCCCcHHHHHHhhhccCcHHHHhh-HHhhhc-----------------CCCCHHHHHHHHHHHHHccCcCCCCC
Q 048535 276 PI---EEGKRNLVDRMWSLTERSELLSVLD-ERLKAK-----------------GGYADEVVEKVLHLGLLCAHPEANSR 334 (409)
Q Consensus 276 p~---~~~~~~~~~~vws~~~~~~~~~~~~-~~l~~~-----------------~~~~~~~~~~l~~l~~~Cl~~dP~~R 334 (409)
+. ....++..+|+|+++ ..+++++. ...... ...+......+.+++.+||+.+|++|
T Consensus 243 aPE~~~~~~~~~~~Di~SlG--v~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R 320 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFG--VLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDR 320 (337)
T ss_pred CcHHhcCCCCCccccHHHHH--HHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhC
Confidence 11 124456678999874 22222221 111100 11122345678999999999999999
Q ss_pred CCHHHHHHHHhcCcC
Q 048535 335 PTIRQVLKMLEGQTE 349 (409)
Q Consensus 335 Pt~~evl~~L~~~~~ 349 (409)
|++.|+++.|+...+
T Consensus 321 Ps~~ell~~l~~~~~ 335 (337)
T cd05054 321 PTFSELVEILGDLLQ 335 (337)
T ss_pred cCHHHHHHHHHHHHh
Confidence 999999999987543
No 62
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.5e-33 Score=262.28 Aligned_cols=227 Identities=23% Similarity=0.391 Sum_probs=178.0
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
.+|+..+.||+|+||.||+|.+. ++.||+|.+..+ .....++.+|++++++++||||+++++++.. .+..+++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 83 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEF 83 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcC-CCCcEEEEEe
Confidence 45777899999999999999986 889999998754 3345679999999999999999999999887 6788999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV 270 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 270 (409)
+++|+|.+++... ....+++..++.++.|+++||+||| +.+++||||||+|||+++++.+||+|||+++.......
T Consensus 84 ~~~~~L~~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 84 MTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred CCCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 9999999999653 2346899999999999999999999 89999999999999999999999999999987654321
Q ss_pred ee--------ecccc---ccCCCcHHHHHHhhhccCcHHHHhh----------------HHhh-hcCCCCHHHHHHHHHH
Q 048535 271 MS--------GRRPI---EEGKRNLVDRMWSLTERSELLSVLD----------------ERLK-AKGGYADEVVEKVLHL 322 (409)
Q Consensus 271 ~~--------g~~p~---~~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~-~~~~~~~~~~~~l~~l 322 (409)
.. +..+. .....+...|+|+++ ..+++++. .... .....+...+..+.++
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG--~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 237 (263)
T cd05052 160 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG--VLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYEL 237 (263)
T ss_pred eccCCCCCccccCCHHHhccCCCCchhHHHHHH--HHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
Confidence 11 11111 123445678999874 11222211 1110 0123334456789999
Q ss_pred HHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 323 GLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
+.+||+.||++|||+.+++++|+..
T Consensus 238 i~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 238 MRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHccCCcccCCCHHHHHHHHHhh
Confidence 9999999999999999999999864
No 63
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6.5e-33 Score=258.30 Aligned_cols=226 Identities=31% Similarity=0.399 Sum_probs=176.9
Q ss_pred CCCCccceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
++|+..+.||+|+||.||++...+..||+|.++... ..+.|.+|+.++++++|+|++++++++...++..+++|||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 468888999999999999999999999999986543 346789999999999999999999987665677899999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce--
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV-- 270 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-- 270 (409)
+|+|.+++... ....+++..+..++.|++.||+||| +.+++||||||+||++++++.+||+|||+++.......
T Consensus 84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 159 (256)
T cd05082 84 KGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 159 (256)
T ss_pred CCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccCCCC
Confidence 99999999653 2335899999999999999999999 89999999999999999999999999999986543210
Q ss_pred --eeecccc---ccCCCcHHHHHHhhhccCcHHHHhh---------------HHhhh--cCCCCHHHHHHHHHHHHHccC
Q 048535 271 --MSGRRPI---EEGKRNLVDRMWSLTERSELLSVLD---------------ERLKA--KGGYADEVVEKVLHLGLLCAH 328 (409)
Q Consensus 271 --~~g~~p~---~~~~~~~~~~vws~~~~~~~~~~~~---------------~~l~~--~~~~~~~~~~~l~~l~~~Cl~ 328 (409)
..+..+. ....++...|+|+++ ..+++++. +.+.. ....+...+..+.+++.+||+
T Consensus 160 ~~~~~y~aPE~~~~~~~~~~~Dv~slG--~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 237 (256)
T cd05082 160 KLPVKWTAPEALREKKFSTKSDVWSFG--ILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWH 237 (256)
T ss_pred ccceeecCHHHHccCCCCchhhhHHHH--HHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhc
Confidence 0111111 123456678999874 11222221 11110 112223445678999999999
Q ss_pred cCCCCCCCHHHHHHHHhc
Q 048535 329 PEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 329 ~dP~~RPt~~evl~~L~~ 346 (409)
.+|++|||+.++++.|+.
T Consensus 238 ~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 238 LDAATRPSFLQLREQLEH 255 (256)
T ss_pred CChhhCcCHHHHHHHHhc
Confidence 999999999999999875
No 64
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.4e-33 Score=271.91 Aligned_cols=270 Identities=20% Similarity=0.254 Sum_probs=196.0
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
.++|+..+.||+|+||.||++.+. +..+|+|.+... .......+.+|++++++++||||++++++|.+ ++..++||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 82 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICM 82 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-CCEEEEEE
Confidence 368999999999999999999987 788999998765 33445679999999999999999999999987 77899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+ ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 83 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 83 EHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 99999999999954 3458999999999999999999993 247999999999999999999999999999754322
Q ss_pred c--eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHH------------------HHHHH
Q 048535 269 Q--VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVE------------------KVLHL 322 (409)
Q Consensus 269 ~--~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~------------------~l~~l 322 (409)
. ...|...+ ....++...|+|+++ ..+++++........... .... .....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG--~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (333)
T cd06650 158 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMG--LSLVEMAIGRYPIPPPDA-KELELMFGCPVEGDPAESETSPRPRPP 234 (333)
T ss_pred ccccCCCCccccCHHHhcCCCCCcHHHHHHHH--HHHHHHHHCCCCCCCcch-hHHHHHhcCcccCCccccccCcccCCc
Confidence 1 11222221 123456789999986 344555544332111110 0100 11112
Q ss_pred HHHccCcCCCCCCCHHH--HHHHHhcCcCCCCC--CCCCcchhHHhhhcccCCCCcccccccCCCCCccccc
Q 048535 323 GLLCAHPEANSRPTIRQ--VLKMLEGQTEGTGL--EDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEIN 390 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~e--vl~~L~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~ 390 (409)
...|....|..||++.. +...+......... .....-.+++.+|+..+|.+|++..+++.||||+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 235 GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred cchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 33455567888887642 23332221111111 0112236899999999999999999999999998765
No 65
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-34 Score=280.03 Aligned_cols=226 Identities=22% Similarity=0.392 Sum_probs=182.9
Q ss_pred CCccceeecCCceEEEEEEEC----C--cEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLL----G--VEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~----~--~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
....++||.|.||.||+|.+. | -.||||..+.+ .....+.|+.|..+|++++|||||+++|.|.+ ...|||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e--~P~Wiv 468 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE--QPMWIV 468 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec--cceeEE
Confidence 344578999999999999886 2 35999999875 66678899999999999999999999999986 568999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
||.++.|.|+.||.. ++..|+......++.||+.||+||| +.+.|||||.++|||+.+.-.+||+||||+|....
T Consensus 469 mEL~~~GELr~yLq~--nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 469 MELAPLGELREYLQQ--NKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred EecccchhHHHHHHh--ccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 999999999999975 3456999999999999999999999 89999999999999999999999999999999887
Q ss_pred Ccee---eecccccc--------CCCcHHHHHHhhhccCcHHHHhhHHh-----------------hhcCCCCHHHHHHH
Q 048535 268 GQVM---SGRRPIEE--------GKRNLVDRMWSLTERSELLSVLDERL-----------------KAKGGYADEVVEKV 319 (409)
Q Consensus 268 ~~~~---~g~~p~~~--------~~~~~~~~vws~~~~~~~~~~~~~~l-----------------~~~~~~~~~~~~~l 319 (409)
..+. .|+.|+.. -.++.++|||-++. .+++++.-.. ....+.++.+++.+
T Consensus 544 ~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgV--CmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~L 621 (974)
T KOG4257|consen 544 DAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGV--CMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPAL 621 (974)
T ss_pred cchhhccccccceeecCccccchhcccchhhHHHHHH--HHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHH
Confidence 6533 45556532 23456677776521 1111111100 01135678889999
Q ss_pred HHHHHHccCcCCCCCCCHHHHHHHHhcCcC
Q 048535 320 LHLGLLCAHPEANSRPTIRQVLKMLEGQTE 349 (409)
Q Consensus 320 ~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 349 (409)
..|+.+||+.+|.+||++.++...|..+.+
T Consensus 622 YslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 622 YSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred HHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 999999999999999999999988876543
No 66
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4.7e-33 Score=261.30 Aligned_cols=228 Identities=25% Similarity=0.417 Sum_probs=171.8
Q ss_pred CCccceeecCCceEEEEEEEC--C--cEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-----CCe
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--G--VEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-----KES 183 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~--~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~ 183 (409)
|.+.+.||+|+||.||+|.+. + ..||+|.++.. .....+.+.+|+.+++.++|+||+++++++... ...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 356788999999999999986 3 36999998754 345567899999999999999999999987532 124
Q ss_pred EEEEEEeCCCCCHHHHHhcC---CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEeccc
Q 048535 184 LILIYDYMENGSLDKWIFEC---DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFG 260 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFG 260 (409)
.+++|||+++|+|.+++... .....+++.....++.|++.||+||| +++|+||||||+|||+++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCC
Confidence 68999999999999987432 12345899999999999999999999 8999999999999999999999999999
Q ss_pred CcccccCCce-eee-----cccc------ccCCCcHHHHHHhhhccCcHHHHhh----------------HHhhh-cCCC
Q 048535 261 LAKMHHHGQV-MSG-----RRPI------EEGKRNLVDRMWSLTERSELLSVLD----------------ERLKA-KGGY 311 (409)
Q Consensus 261 la~~~~~~~~-~~g-----~~p~------~~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~~-~~~~ 311 (409)
+++....... .++ ...+ ....++...|+|+++ ..+++++. ..... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG--~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 235 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFG--VTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQ 235 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHH--HHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 9987643321 111 1101 123456778999874 11222221 11110 0112
Q ss_pred CHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 312 ADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 312 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
+......+.+++.+||+.||++|||+.++++.|++.
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 236 PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 334456789999999999999999999999999864
No 67
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.2e-33 Score=260.33 Aligned_cols=227 Identities=25% Similarity=0.391 Sum_probs=177.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
.++|+..+.||+|+||.||+|.+. ++.||+|.++... ...+++.+|+.++++++||||+++++++.. .+..+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 82 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTL-EEPIYIVTEL 82 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEec-CCCeeeeeec
Confidence 466888999999999999999986 7789999997543 235678999999999999999999999887 6778999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV 270 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 270 (409)
+++++|.+++.... ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 83 MKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred ccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 99999999996532 346899999999999999999999 89999999999999999999999999999987543211
Q ss_pred --eee------ccccc---cCCCcHHHHHHhhhccCcHHHHh----------------hHHhhh-cCCCCHHHHHHHHHH
Q 048535 271 --MSG------RRPIE---EGKRNLVDRMWSLTERSELLSVL----------------DERLKA-KGGYADEVVEKVLHL 322 (409)
Q Consensus 271 --~~g------~~p~~---~~~~~~~~~vws~~~~~~~~~~~----------------~~~l~~-~~~~~~~~~~~l~~l 322 (409)
..| ..+.+ ....+..+|+|+++. .+++++ ...... ....+......+.++
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~--~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGI--LLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDI 236 (261)
T ss_pred cccCCCcCceeccCccccccCCCCchhhHHHHHH--HHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHH
Confidence 011 11111 134466789998731 111111 111110 012334456789999
Q ss_pred HHHccCcCCCCCCCHHHHHHHHhc
Q 048535 323 GLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
+.+||+.+|.+||++.++++.|++
T Consensus 237 i~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 237 MLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHHHhhcCcccCCCHHHHHHHHhc
Confidence 999999999999999999999985
No 68
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.4e-33 Score=271.64 Aligned_cols=181 Identities=21% Similarity=0.291 Sum_probs=147.0
Q ss_pred CCCCccceeecCCceEEEEEEEC---CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL---GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~---~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
++|+..+.||+|+||.||+|.+. +..||+|.+... .....+.+.+|+.+++.++||||+++++++.+ .+..++
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~l 108 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD-ESYLYL 108 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe-CCEEEE
Confidence 56889999999999999999875 368999998643 23345678899999999999999999999987 678999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
||||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 109 v~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 9999999999999954 346899999999999999999999 8999999999999999999999999999998764
Q ss_pred CCc-eeeeccccc------cCCCcHHHHHHhhhccCcHHHHhh
Q 048535 267 HGQ-VMSGRRPIE------EGKRNLVDRMWSLTERSELLSVLD 302 (409)
Q Consensus 267 ~~~-~~~g~~p~~------~~~~~~~~~vws~~~~~~~~~~~~ 302 (409)
... ...|...+. ...++..+|+|+++ ..+++++.
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG--vil~ell~ 223 (340)
T PTZ00426 183 TRTYTLCGTPEYIAPEILLNVGHGKAADWWTLG--IFIYEILV 223 (340)
T ss_pred CCcceecCChhhcCHHHHhCCCCCccccccchh--hHHHHHhc
Confidence 322 222332221 23356678899885 33444443
No 69
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.2e-34 Score=249.32 Aligned_cols=176 Identities=24% Similarity=0.359 Sum_probs=150.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
.++|++++.||+|-||.||.|+.+ +-.||+|++... ..+..+++.+|+++-+.|+||||+++++||.+ ....||
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd-~~riyL 99 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD-SKRIYL 99 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec-cceeEE
Confidence 467999999999999999999987 778999999654 22334678999999999999999999999998 778999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
++||.++|+|++.|.+. ....+++.....++.|+|.||.|+| .++||||||||+|+|++.++..||+|||-+-..+
T Consensus 100 ilEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EEEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 99999999999999753 3346888889999999999999999 9999999999999999999999999999987765
Q ss_pred CC--ceeeeccccc------cCCCcHHHHHHhhh
Q 048535 267 HG--QVMSGRRPIE------EGKRNLVDRMWSLT 292 (409)
Q Consensus 267 ~~--~~~~g~~p~~------~~~~~~~~~vws~~ 292 (409)
.+ ..+||..-+. ...++...|+|.+.
T Consensus 176 ~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lg 209 (281)
T KOG0580|consen 176 SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLG 209 (281)
T ss_pred CCCceeeecccccCCHhhcCCCCccchhhHHHHH
Confidence 43 3667765432 34567778999884
No 70
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.4e-33 Score=277.96 Aligned_cols=234 Identities=21% Similarity=0.322 Sum_probs=177.0
Q ss_pred HHHhCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCC-CCceeeEeeEEEc
Q 048535 109 HAATKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLD-SEHGMREFLAEVSSLGRLK-HRNLVGLRGWCKK 179 (409)
Q Consensus 109 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~ 179 (409)
....++|.+.+.||+|+||.||+|++. ++.||+|+++.. .....+.+.+|+.+|.++. |||||+++++|..
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~ 112 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK 112 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence 344567888899999999999999864 357999999755 2333457899999999997 9999999999987
Q ss_pred cCCeEEEEEEeCCCCCHHHHHhcCCC------------------------------------------------------
Q 048535 180 EKESLILIYDYMENGSLDKWIFECDE------------------------------------------------------ 205 (409)
Q Consensus 180 ~~~~~~lv~E~~~~gsL~~~l~~~~~------------------------------------------------------ 205 (409)
....++||||+++|+|.++++....
T Consensus 113 -~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 113 -GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred -CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 6689999999999999999975311
Q ss_pred -----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCC
Q 048535 206 -----------------------------------------SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKAS 244 (409)
Q Consensus 206 -----------------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~ 244 (409)
...+++..++.++.|++.||.||| +.+|+||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcc
Confidence 124788889999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccCcccccCCce------eee---cccc---ccCCCcHHHHHHhhhccCcHHHHhh-HH-------
Q 048535 245 NVLLDKKMNARLGDFGLAKMHHHGQV------MSG---RRPI---EEGKRNLVDRMWSLTERSELLSVLD-ER------- 304 (409)
Q Consensus 245 NILl~~~~~~kl~DFGla~~~~~~~~------~~g---~~p~---~~~~~~~~~~vws~~~~~~~~~~~~-~~------- 304 (409)
|||+++++.+||+|||+++....... ..+ ..+. ....++...|+|+++ ..+++++. ..
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG--vil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFG--ILLWEIFTLGGTPYPELP 346 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHH--HHHHHHHHcCCCCCCCCC
Confidence 99999999999999999986432210 001 0111 123456678999873 12222221 11
Q ss_pred --------hhh--cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCc
Q 048535 305 --------LKA--KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQT 348 (409)
Q Consensus 305 --------l~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 348 (409)
+.. ....+......+.+++..||+.+|.+||+++|+++.|++..
T Consensus 347 ~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 347 MNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred chHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 100 01122334567899999999999999999999999998753
No 71
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.4e-33 Score=264.82 Aligned_cols=216 Identities=22% Similarity=0.340 Sum_probs=161.6
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
.|+..+.||+|+||.||+|... ++.||+|.+.... ......+.+|+.++.+++|+||+++++++.+ .+..++||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~-~~~~~lv~ 79 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET-KDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc-CCeEEEEE
Confidence 3777899999999999999886 8999999986542 2234568899999999999999999998887 67899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++.....
T Consensus 80 e~~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 80 TIMNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG 155 (285)
T ss_pred EecCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence 999999999888643 2346899999999999999999999 899999999999999999999999999999875433
Q ss_pred cee---eecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhc-------------------CCCCHHHHHHHH
Q 048535 269 QVM---SGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAK-------------------GGYADEVVEKVL 320 (409)
Q Consensus 269 ~~~---~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~-------------------~~~~~~~~~~l~ 320 (409)
... .|...+ ....++...|+|+++ ..+++++....+.. ..++......+.
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG--vil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 233 (285)
T cd05631 156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLG--CLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAK 233 (285)
T ss_pred CeecCCCCCCCccCHhhhcCCCCCcccCchhHH--HHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHH
Confidence 221 122211 123456678899874 22333332222111 122233444566
Q ss_pred HHHHHccCcCCCCCCC
Q 048535 321 HLGLLCAHPEANSRPT 336 (409)
Q Consensus 321 ~l~~~Cl~~dP~~RPt 336 (409)
+|+.+||+.||.+||+
T Consensus 234 ~li~~~l~~~P~~R~~ 249 (285)
T cd05631 234 SICRMLLTKNPKERLG 249 (285)
T ss_pred HHHHHHhhcCHHHhcC
Confidence 6677777777777765
No 72
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.5e-33 Score=262.76 Aligned_cols=228 Identities=21% Similarity=0.365 Sum_probs=174.7
Q ss_pred CCCCccceeecCCceEEEEEEEC------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL------GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
++|+..+.||+|+||.||+|.+. +..||+|.+... .......|.+|++++++++||||+++++++.. ....+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ-EQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec-CCceE
Confidence 46778899999999999999852 578999999754 34455789999999999999999999999887 67889
Q ss_pred EEEEeCCCCCHHHHHhcCC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC
Q 048535 186 LIYDYMENGSLDKWIFECD--------------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK 251 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~ 251 (409)
+||||+++|+|.+++.... ....+++.+.+.++.|++.||+||| +++|+||||||+|||++++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCC
Confidence 9999999999999985321 1235889999999999999999999 8999999999999999999
Q ss_pred CcEEEecccCcccccCCce------eee---cccc---ccCCCcHHHHHHhhhccCcHHHHhh-H--------------H
Q 048535 252 MNARLGDFGLAKMHHHGQV------MSG---RRPI---EEGKRNLVDRMWSLTERSELLSVLD-E--------------R 304 (409)
Q Consensus 252 ~~~kl~DFGla~~~~~~~~------~~g---~~p~---~~~~~~~~~~vws~~~~~~~~~~~~-~--------------~ 304 (409)
+.+||+|||+++....... ..+ ..+. ....++...|+|+++ ..+++++. . .
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG--~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFG--VVLWEIFSFGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHH--HHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 9999999999976533210 000 1111 124456778999874 12222221 1 0
Q ss_pred hh--hcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 305 LK--AKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 305 l~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
+. .....+......+.+++.+||+.||++||++.++++.|..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 239 VRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 10 0012233445678999999999999999999999998864
No 73
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=8.3e-33 Score=258.92 Aligned_cols=231 Identities=23% Similarity=0.346 Sum_probs=177.2
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|++.+.||+|+||.||+|+.. ++.||||.++.. .......+.+|+++++.++||||+++++++.+ .+..+++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-DNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-CCeEEEE
Confidence 57889999999999999999986 899999988642 34455678999999999999999999999887 6788999
Q ss_pred EEeCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 188 YDYMENGSLDKWIFECD-ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
+||+++|+|.+++.... ....+++..+..++.|+++||.||| +.+++|+||||+|||++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 99999999999885432 2345889999999999999999999 8999999999999999999999999999988654
Q ss_pred CCc----eeeeccc---c---ccCCCcHHHHHHhhhcc-------C--------cHHHHhhHHhh--hcCCCCHHHHHHH
Q 048535 267 HGQ----VMSGRRP---I---EEGKRNLVDRMWSLTER-------S--------ELLSVLDERLK--AKGGYADEVVEKV 319 (409)
Q Consensus 267 ~~~----~~~g~~p---~---~~~~~~~~~~vws~~~~-------~--------~~~~~~~~~l~--~~~~~~~~~~~~l 319 (409)
... ...|... . .....+...|+|+++.. . ...+....... ............+
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd08228 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKL 237 (267)
T ss_pred chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHH
Confidence 322 1112211 1 12344667889987310 0 11111111110 0011123455679
Q ss_pred HHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 320 LHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 320 ~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
.+++.+||+.+|++||++.++++.|+++
T Consensus 238 ~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 238 RELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred HHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 9999999999999999999999999875
No 74
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.1e-33 Score=263.59 Aligned_cols=225 Identities=28% Similarity=0.431 Sum_probs=171.4
Q ss_pred CCccceeecCCceEEEEEEEC------CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCeEEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLL------GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KESLIL 186 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~~l 186 (409)
|+..+.||+|+||.||++... +..||+|.++... ......|.+|++++++++||||+++++++... ....++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 378899999999999887532 6789999997653 34567789999999999999999999988653 345889
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
+|||+++|+|.+++.. ..+++.++..++.|+++||.||| +.+|+||||||+|||+++++.+||+|||+++...
T Consensus 86 v~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 86 IMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 9999999999999953 35999999999999999999999 8999999999999999999999999999998654
Q ss_pred CCcee-------ee---cccc---ccCCCcHHHHHHhhhccCcHHHHhhHHhh---------------------------
Q 048535 267 HGQVM-------SG---RRPI---EEGKRNLVDRMWSLTERSELLSVLDERLK--------------------------- 306 (409)
Q Consensus 267 ~~~~~-------~g---~~p~---~~~~~~~~~~vws~~~~~~~~~~~~~~l~--------------------------- 306 (409)
.+... .+ ..+. .....+..+|+|+++ ..+++++....+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG--~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFG--VTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHH--HHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 32210 00 0111 124456678888873 112222211000
Q ss_pred ----hcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCc
Q 048535 307 ----AKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQT 348 (409)
Q Consensus 307 ----~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 348 (409)
.....+...+.++.+++..||+.+|++|||++++++.|+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 000112233568999999999999999999999999998653
No 75
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.2e-33 Score=272.15 Aligned_cols=233 Identities=25% Similarity=0.374 Sum_probs=175.6
Q ss_pred hCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccCC-hHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCC
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLDS-EHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKE 182 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 182 (409)
.++|++.+.||+|+||.||+|.+. ++.||||+++... ......+.+|+.++.++ +||||++++++|...+.
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 467899999999999999999742 6789999997642 34456788999999999 78999999999876566
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCC---------------------------------------------------------
Q 048535 183 SLILIYDYMENGSLDKWIFECDE--------------------------------------------------------- 205 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~--------------------------------------------------------- 205 (409)
..+++|||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 78999999999999999864211
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc--eeee---
Q 048535 206 -------SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--VMSG--- 273 (409)
Q Consensus 206 -------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--~~~g--- 273 (409)
...+++..+..++.|+++||+||| +++|+||||||+|||++.++++||+|||+++...... ...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 124788899999999999999999 8999999999999999999999999999998643221 0001
Q ss_pred ----cccc---ccCCCcHHHHHHhhhccCcHHHHhh----------------HHhhh--cCCCCHHHHHHHHHHHHHccC
Q 048535 274 ----RRPI---EEGKRNLVDRMWSLTERSELLSVLD----------------ERLKA--KGGYADEVVEKVLHLGLLCAH 328 (409)
Q Consensus 274 ----~~p~---~~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~~--~~~~~~~~~~~l~~l~~~Cl~ 328 (409)
..+. ....++..+|+|+++ ..+++++. ..+.. ....+......+.+++..||+
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG--~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~ 320 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFG--VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 320 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHH--HHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcc
Confidence 1111 124456778999874 11222211 00000 011122234578999999999
Q ss_pred cCCCCCCCHHHHHHHHhcCcC
Q 048535 329 PEANSRPTIRQVLKMLEGQTE 349 (409)
Q Consensus 329 ~dP~~RPt~~evl~~L~~~~~ 349 (409)
.||++|||+.|+++.|+...+
T Consensus 321 ~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 321 GEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999987543
No 76
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=7.5e-33 Score=261.57 Aligned_cols=230 Identities=22% Similarity=0.321 Sum_probs=173.1
Q ss_pred CCCCccceeecCCceEEEEEEEC--Cc----EEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GV----EVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
++|+..+.||+|+||.||+|.+. +. .+++|.+.... .....++..|+..+++++||||+++++++.. ...+
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~--~~~~ 84 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG--ASLQ 84 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC--CccE
Confidence 46788899999999999999984 43 58888886442 3345678889999999999999999998753 4578
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
+++||+++|+|.+++... ...+++..+..++.||+.||+||| +++++||||||+|||+++++.+||+|||+++..
T Consensus 85 ~i~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEEEeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 999999999999999643 346899999999999999999999 899999999999999999999999999999865
Q ss_pred cCCc------eeee---cccc---ccCCCcHHHHHHhhhccCcHHHHhh-HHhhhc----------------CCCCHHHH
Q 048535 266 HHGQ------VMSG---RRPI---EEGKRNLVDRMWSLTERSELLSVLD-ERLKAK----------------GGYADEVV 316 (409)
Q Consensus 266 ~~~~------~~~g---~~p~---~~~~~~~~~~vws~~~~~~~~~~~~-~~l~~~----------------~~~~~~~~ 316 (409)
.... ...+ ..+. ....++..+|+|+++ ..+++++. ...... ...+..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG--~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYG--VTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICT 237 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHH--HHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCC
Confidence 3321 0011 1111 124566778999874 12222221 110000 01112234
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCCC
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEGT 351 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 351 (409)
..+.+++.+||+.||++|||+.|+++.|+.+...+
T Consensus 238 ~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 238 IDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 46788999999999999999999999998765443
No 77
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=7.3e-33 Score=262.96 Aligned_cols=229 Identities=27% Similarity=0.414 Sum_probs=174.9
Q ss_pred CCCccceeecCCceEEEEEEEC-------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
+|+..+.||+|+||.||+|... ...+|+|.+... .......+.+|+.+++.++||||+++++.+.. .+..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ-DGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec-CCCcE
Confidence 4778899999999999999864 256999998755 33445789999999999999999999999887 67789
Q ss_pred EEEEeCCCCCHHHHHhcCC---------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCC
Q 048535 186 LIYDYMENGSLDKWIFECD---------------------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKAS 244 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~ 244 (409)
+++||+++|+|.+++.... ....+++..++.++.|++.||.||| +.+|+||||||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhh
Confidence 9999999999999986421 1235889999999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccCcccccCCce------ee---ecccc---ccCCCcHHHHHHhhhccCcHHHHhh-HH-------
Q 048535 245 NVLLDKKMNARLGDFGLAKMHHHGQV------MS---GRRPI---EEGKRNLVDRMWSLTERSELLSVLD-ER------- 304 (409)
Q Consensus 245 NILl~~~~~~kl~DFGla~~~~~~~~------~~---g~~p~---~~~~~~~~~~vws~~~~~~~~~~~~-~~------- 304 (409)
|||+++++.+||+|||+++....... .. ...+. ....++...|+|+++. .+++++. ..
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~--~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGV--LLWEIVTLGGNPYPGIA 234 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHH--HHHHHHhcCCCCCCCCC
Confidence 99999999999999999976432110 00 01111 1234567789998741 1222221 11
Q ss_pred -------hh--hcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCc
Q 048535 305 -------LK--AKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQT 348 (409)
Q Consensus 305 -------l~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 348 (409)
+. .....+......+.+++..||+.+|++||++.++++.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 235 PERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 00 001223345568899999999999999999999999998764
No 78
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-34 Score=286.85 Aligned_cols=226 Identities=27% Similarity=0.417 Sum_probs=180.0
Q ss_pred CCccceeecCCceEEEEEEEC------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLL------GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
.+..++||+|+||+||+|.|- ..+||+|++... ..+...++++|+.+|.+++|||+++++|+|.. ..+.||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~--s~~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCML--STLQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhccc--chHHHH
Confidence 445688999999999999885 457999999755 55667899999999999999999999999986 347899
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
++|||.|+|.+|++.++ ..+.....+.|+.|||+||.||| +++++||||.++|||+.+-..+||.|||+|+....
T Consensus 776 tq~mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred HHhcccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence 99999999999998754 45888999999999999999999 89999999999999999999999999999998876
Q ss_pred Cc----eeeeccccc--------cCCCcHHHHHHhhhcc-----------------CcHHHHhhHHhhhcCCCCHHHHHH
Q 048535 268 GQ----VMSGRRPIE--------EGKRNLVDRMWSLTER-----------------SELLSVLDERLKAKGGYADEVVEK 318 (409)
Q Consensus 268 ~~----~~~g~~p~~--------~~~~~~~~~vws~~~~-----------------~~~~~~~~~~l~~~~~~~~~~~~~ 318 (409)
+. .-.|+.|+. ...+.-.+|||+++.. .++.+.+....+ -..++.+...
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR--LsqPpiCtiD 928 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER--LSQPPICTID 928 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc--CCCCCCccHH
Confidence 54 223444443 2455666777766311 112222222222 2345566677
Q ss_pred HHHHHHHccCcCCCCCCCHHHHHHHHhcCcC
Q 048535 319 VLHLGLLCAHPEANSRPTIRQVLKMLEGQTE 349 (409)
Q Consensus 319 l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 349 (409)
+..++.+||..|+..||+++++...+.+...
T Consensus 929 Vy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 929 VYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred HHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 8899999999999999999999988766543
No 79
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=6e-33 Score=259.12 Aligned_cols=227 Identities=22% Similarity=0.398 Sum_probs=177.2
Q ss_pred hCCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
.++|+..++||+|+||.||+|... +..||+|.+.... ...+.+.+|+.++++++|+||+++++.+.. .+..+++|||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 82 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK-EEPIYIITEY 82 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCCcEEEEec
Confidence 357888999999999999999987 7789999986543 235789999999999999999999998876 6778999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV 270 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 270 (409)
+++|+|.+++... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 83 MAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 158 (261)
T ss_pred CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence 9999999999653 3346899999999999999999999 89999999999999999999999999999987654321
Q ss_pred ee--------ecccc---ccCCCcHHHHHHhhhccCcHHHHhh-HHhhh----------------cCCCCHHHHHHHHHH
Q 048535 271 MS--------GRRPI---EEGKRNLVDRMWSLTERSELLSVLD-ERLKA----------------KGGYADEVVEKVLHL 322 (409)
Q Consensus 271 ~~--------g~~p~---~~~~~~~~~~vws~~~~~~~~~~~~-~~l~~----------------~~~~~~~~~~~l~~l 322 (409)
.. +..+. ....++...|+|+++ ..+++++. ..... ..+.....+..+.++
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG--ILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDI 236 (261)
T ss_pred eccCCCccceecCCHHHhccCCCChhhhhhhhH--HHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 11 11111 124456678999874 12222221 11110 011122345678999
Q ss_pred HHHccCcCCCCCCCHHHHHHHHhc
Q 048535 323 GLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
+.+||+.+|++|||++++.+.|+.
T Consensus 237 i~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 237 MKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHHccCCcccCcCHHHHHHHHhc
Confidence 999999999999999999999985
No 80
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.8e-33 Score=268.92 Aligned_cols=217 Identities=20% Similarity=0.221 Sum_probs=165.2
Q ss_pred eecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCC
Q 048535 121 IGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGS 195 (409)
Q Consensus 121 lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gs 195 (409)
||+|+||.||+|... ++.||+|.++.. .......+.+|+.++.+++||||+++++++.. .+..++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS-PEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec-CCeEEEEEcCCCCCc
Confidence 799999999999987 789999999643 33445678899999999999999999998887 678999999999999
Q ss_pred HHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc----ee
Q 048535 196 LDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ----VM 271 (409)
Q Consensus 196 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~----~~ 271 (409)
|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 80 L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 153 (312)
T cd05585 80 LFHHLQR---EGRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTF 153 (312)
T ss_pred HHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccc
Confidence 9999954 346899999999999999999999 8999999999999999999999999999998642211 12
Q ss_pred eeccccc------cCCCcHHHHHHhhhc-------------cCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCC
Q 048535 272 SGRRPIE------EGKRNLVDRMWSLTE-------------RSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEAN 332 (409)
Q Consensus 272 ~g~~p~~------~~~~~~~~~vws~~~-------------~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~ 332 (409)
.|...+. ...++...|+|+++. .....+.....+.....++......+.+++.+||+.||.
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~ 233 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPT 233 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHH
Confidence 2332221 234566678888731 111222222222222234445566788999999999999
Q ss_pred CCCCHHHHHHHH
Q 048535 333 SRPTIRQVLKML 344 (409)
Q Consensus 333 ~RPt~~evl~~L 344 (409)
+||++.++.+.|
T Consensus 234 ~R~~~~~~~e~l 245 (312)
T cd05585 234 RRLGYNGAQEIK 245 (312)
T ss_pred HcCCCCCHHHHH
Confidence 998654443333
No 81
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.4e-34 Score=278.88 Aligned_cols=224 Identities=21% Similarity=0.313 Sum_probs=175.6
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
.-|+.++.||.|+.|.|-+|++. |+.+|||++... .......+.+|+.+|+-+.||||+++++++.+ +.++|+|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~-~~~lylv 90 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN-KQHLYLV 90 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc-CceEEEE
Confidence 34677899999999999999987 999999999765 23334568899999999999999999999987 7899999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
.||+++|.|++|+. .++++++.++.+++.||+.|+.|+| ..+|+||||||+|+|||..+++||+|||+|.+...
T Consensus 91 lEyv~gGELFdylv---~kG~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 91 LEYVPGGELFDYLV---RKGPLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred EEecCCchhHHHHH---hhCCCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 99999999999994 4568999999999999999999999 89999999999999999999999999999998776
Q ss_pred Ccee---eecccccc-------CCCcHHHHHHhhh-------------ccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHH
Q 048535 268 GQVM---SGRRPIEE-------GKRNLVDRMWSLT-------------ERSELLSVLDERLKAKGGYADEVVEKVLHLGL 324 (409)
Q Consensus 268 ~~~~---~g~~p~~~-------~~~~~~~~vws~~-------------~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~ 324 (409)
+.++ ||.+-+.. .....++|||+.+ +.+.+..++.+--.+.-+.|...+.+..+|+.
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr 244 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLR 244 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHH
Confidence 6532 33332211 2235678999873 22333333333333223344555666777777
Q ss_pred HccCcCCCCCCCHHHHHHH
Q 048535 325 LCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 325 ~Cl~~dP~~RPt~~evl~~ 343 (409)
+++..||+.|-|++||++.
T Consensus 245 ~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 245 RMLDVDPSTRITTEEILKH 263 (786)
T ss_pred HHhccCccccccHHHHhhC
Confidence 7777777777777777763
No 82
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.3e-33 Score=265.49 Aligned_cols=233 Identities=24% Similarity=0.407 Sum_probs=178.6
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEcc
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKE 180 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 180 (409)
...++|+..+.||+|+||.||++... ...+|+|.+... .......+.+|+.++.++ +|+||+++++++..
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~- 87 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ- 87 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC-
Confidence 34567888999999999999999875 267999998754 344556789999999999 89999999999987
Q ss_pred CCeEEEEEEeCCCCCHHHHHhcC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCee
Q 048535 181 KESLILIYDYMENGSLDKWIFEC-------------DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVL 247 (409)
Q Consensus 181 ~~~~~lv~E~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 247 (409)
.+..+++|||+++|+|.+++... .....+++..++.++.|++.||+||| +.+|+||||||+|||
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil 164 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVL 164 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEE
Confidence 67899999999999999999642 12346899999999999999999999 899999999999999
Q ss_pred eCCCCcEEEecccCcccccCCce----eee-----ccccc---cCCCcHHHHHHhhhccCcHHHHh--------------
Q 048535 248 LDKKMNARLGDFGLAKMHHHGQV----MSG-----RRPIE---EGKRNLVDRMWSLTERSELLSVL-------------- 301 (409)
Q Consensus 248 l~~~~~~kl~DFGla~~~~~~~~----~~g-----~~p~~---~~~~~~~~~vws~~~~~~~~~~~-------------- 301 (409)
+++++.+||+|||+++....... ..+ ..+.+ ...++...|+|+++ ..+++++
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG--VLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred EcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehh--hHHHHHhcCCCCCCCCCCHHH
Confidence 99999999999999986543221 011 11111 23455667888863 1122221
Q ss_pred --hHHhhh-cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCc
Q 048535 302 --DERLKA-KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQT 348 (409)
Q Consensus 302 --~~~l~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 348 (409)
+..... ....+......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 LFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111110 01223344567899999999999999999999999998753
No 83
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-33 Score=271.95 Aligned_cols=227 Identities=24% Similarity=0.362 Sum_probs=186.9
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
++|...+.+|+|+||.++..+.+ ++.+++|.+... +...++...+|+.++++++|||||.+.+.|..++..++|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 56788899999999999988877 789999999765 44455678899999999999999999999998555599999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
+||+||+|.+.|.+.+ ...++++.+..++.|++.|+.||| ++.|+|||||+.||+++.+..+||+|||+|+.....
T Consensus 84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999997754 567999999999999999999999 899999999999999999999999999999998776
Q ss_pred c----eeeecccc------ccCCCcHHHHHHhhh-------------ccCcHHHHhhHHhhhc-CCCCHHHHHHHHHHHH
Q 048535 269 Q----VMSGRRPI------EEGKRNLVDRMWSLT-------------ERSELLSVLDERLKAK-GGYADEVVEKVLHLGL 324 (409)
Q Consensus 269 ~----~~~g~~p~------~~~~~~~~~~vws~~-------------~~~~~~~~~~~~l~~~-~~~~~~~~~~l~~l~~ 324 (409)
. .+.|.+.+ ....|+.++|+|+++ ...+....+....... .+.+.....++..++.
T Consensus 160 ~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~ 239 (426)
T KOG0589|consen 160 DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVK 239 (426)
T ss_pred hhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHH
Confidence 4 23343332 246789999999995 1122333333333322 3455667788999999
Q ss_pred HccCcCCCCCCCHHHHHHH
Q 048535 325 LCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 325 ~Cl~~dP~~RPt~~evl~~ 343 (409)
.|++.+|..||++.+++.+
T Consensus 240 ~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 240 SMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHhhcCCccCCCHHHHhhC
Confidence 9999999999999999865
No 84
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=7.2e-33 Score=258.33 Aligned_cols=224 Identities=29% Similarity=0.435 Sum_probs=172.7
Q ss_pred CCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
++|+..+.||+|+||.||+|.+. +..+|+|.+.... .....|.+|+.++++++||||+++++++.. ....+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 81 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTK-QRPIYIVTEYM 81 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEcc-CCCcEEEEEcC
Confidence 45778899999999999999887 5569999987543 234679999999999999999999999876 66789999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM 271 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 271 (409)
++|+|.+++... ...+++.+++.++.|++.||.||| +.+++|+||||+||++++++.+||+|||+++........
T Consensus 82 ~~~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05113 82 SNGCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT 156 (256)
T ss_pred CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence 999999999653 236899999999999999999999 899999999999999999999999999999865433211
Q ss_pred e--e------ccccc---cCCCcHHHHHHhhhccCcHHHHh----------------hHHhhhc-CCCCHHHHHHHHHHH
Q 048535 272 S--G------RRPIE---EGKRNLVDRMWSLTERSELLSVL----------------DERLKAK-GGYADEVVEKVLHLG 323 (409)
Q Consensus 272 ~--g------~~p~~---~~~~~~~~~vws~~~~~~~~~~~----------------~~~l~~~-~~~~~~~~~~l~~l~ 323 (409)
. + ..+.+ ...++..+|+|+++ ..+++++ +...... ...+......+.+++
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG--~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 234 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFG--VLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIM 234 (256)
T ss_pred ecCCCccChhhCCHHHHhcCcccchhHHHHHH--HHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Confidence 1 1 11111 13456778999873 1111111 1111110 111223456789999
Q ss_pred HHccCcCCCCCCCHHHHHHHHh
Q 048535 324 LLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 324 ~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
.+||+.||.+|||+.++++.|+
T Consensus 235 ~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 235 YSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHcCCCcccCCCHHHHHHhhC
Confidence 9999999999999999998774
No 85
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.3e-32 Score=259.37 Aligned_cols=218 Identities=23% Similarity=0.363 Sum_probs=163.3
Q ss_pred eeecCCceEEEEEEEC--------------------------CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeE
Q 048535 120 VIGLGGNGKVYKGQLL--------------------------GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGL 173 (409)
Q Consensus 120 ~lG~G~fg~Vy~~~~~--------------------------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 173 (409)
.||+|+||.||+|.+. ...||+|.+..........|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 5999999999999752 13589999976555555678999999999999999999
Q ss_pred eeEEEccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC-
Q 048535 174 RGWCKKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM- 252 (409)
Q Consensus 174 ~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~- 252 (409)
+++|.+ ....++||||+++|+|..++... ...+++..+..++.|+++||+||| +++|+||||||+|||++.++
T Consensus 82 ~~~~~~-~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 82 HGVCVR-GSENIMVEEFVEHGPLDVCLRKE--KGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEe-CCceEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccCc
Confidence 999987 67789999999999999998642 346899999999999999999999 89999999999999997643
Q ss_pred ------cEEEecccCcccccCCceeeecccc---c----cCCCcHHHHHHhhhccCcHHHHh-hHH--------------
Q 048535 253 ------NARLGDFGLAKMHHHGQVMSGRRPI---E----EGKRNLVDRMWSLTERSELLSVL-DER-------------- 304 (409)
Q Consensus 253 ------~~kl~DFGla~~~~~~~~~~g~~p~---~----~~~~~~~~~vws~~~~~~~~~~~-~~~-------------- 304 (409)
.+|++|||++..........+..++ + ...++...|+|+++. .+++++ ...
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~--~l~el~~~g~~p~~~~~~~~~~~~ 233 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGT--TLLEICFDGEVPLKERTPSEKERF 233 (274)
T ss_pred ccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHH--HHHHHHhCCCCCccccChHHHHHH
Confidence 3799999998654322211122211 1 133567789998741 122221 100
Q ss_pred hhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 048535 305 LKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 305 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
.......+......+.+++.+||+.+|++|||+.++++.|.
T Consensus 234 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 234 YEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 01001122222356889999999999999999999999873
No 86
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.9e-33 Score=270.31 Aligned_cols=222 Identities=23% Similarity=0.248 Sum_probs=172.3
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|++.+.||+|+||.||+|... ++.||+|+++.. .....+.+.+|++++..++||||+++++++.. .+..|+|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD-DEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc-CCEEEEE
Confidence 46889999999999999999986 889999999754 22345678899999999999999999999887 7789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 80 MEYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred EeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 999999999999953 346899999999999999999999 89999999999999999999999999999986543
Q ss_pred C-ceeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhh--------------------cCCCC---HHHHH
Q 048535 268 G-QVMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKA--------------------KGGYA---DEVVE 317 (409)
Q Consensus 268 ~-~~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~--------------------~~~~~---~~~~~ 317 (409)
. ....|...+ ....++...|+|+++. .+++++....+. .+... .....
T Consensus 154 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~--il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~ 231 (333)
T cd05600 154 YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGC--MLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSD 231 (333)
T ss_pred ccCCcccCccccChhHhcCCCCCCccceecchH--HHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCH
Confidence 1 111222221 1234567788888741 122222111110 00111 13356
Q ss_pred HHHHHHHHccCcCCCCCCCHHHHHHH
Q 048535 318 KVLHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 318 ~l~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
.+.+++.+||+.+|.+||++.++++.
T Consensus 232 ~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 232 EAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 78899999999999999999999864
No 87
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=7.5e-33 Score=262.24 Aligned_cols=261 Identities=22% Similarity=0.261 Sum_probs=179.9
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
++|++.+.||+|+||.||+|+.. ++.||+|++... .....+.+.+|+.++++++||||+++++++.. .+..++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR-RGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec-CCEEEEEE
Confidence 46889999999999999999997 788999999754 23345678899999999999999999999887 67899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
||++++.+..+.. ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 80 e~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 80 EYVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred ecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 9999977765542 2346899999999999999999999 899999999999999999999999999999875432
Q ss_pred c-----eeeecccc---c---cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCC-----
Q 048535 269 Q-----VMSGRRPI---E---EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEAN----- 332 (409)
Q Consensus 269 ~-----~~~g~~p~---~---~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~----- 332 (409)
. ...|...+ + ...++...|+|+++ ..+++++............+. +..+ ..+....|.
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG--vil~el~~g~~pf~~~~~~~~---~~~~-~~~~~~~~~~~~~~ 227 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVG--CILGELSDGQPLFPGESEIDQ---LFTI-QKVLGPLPAEQMKL 227 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHH--HHHHHHHhCCCCCCCCCHHHH---HHHH-HHhhCCCCHHHHHh
Confidence 1 11222221 1 24456788999986 345555544433211111111 1111 111111110
Q ss_pred --CCCCHHHHH----HHHhcCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 333 --SRPTIRQVL----KMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 333 --~RPt~~evl----~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
..|...... ..-+.........-+....+++.+|+..+|.+|+++++++.||||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 228 FYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred hhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 000000000 000000000000112346899999999999999999999999997
No 88
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=6.2e-33 Score=267.90 Aligned_cols=215 Identities=20% Similarity=0.273 Sum_probs=167.4
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMEN 193 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~ 193 (409)
+.||+|+||.||++... |..||+|.++.. .......+.+|+.++++++||||+++++++.. .+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec-CCEEEEEEeCCCC
Confidence 46999999999999986 899999999754 23345678899999999999999999999887 6789999999999
Q ss_pred CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc----
Q 048535 194 GSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ---- 269 (409)
Q Consensus 194 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~---- 269 (409)
|+|..++.. ...+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 153 (323)
T cd05595 80 GELFFHLSR---ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccc
Confidence 999998853 346899999999999999999999 8999999999999999999999999999987532211
Q ss_pred eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHH---------------hhhcCCCCHHHHHHHHHHHHHccC
Q 048535 270 VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDER---------------LKAKGGYADEVVEKVLHLGLLCAH 328 (409)
Q Consensus 270 ~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~---------------l~~~~~~~~~~~~~l~~l~~~Cl~ 328 (409)
...|...+ ....++...|+|+++ ..+++++... ......++......+.+++.+||+
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG--vil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~ 231 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLG--VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 231 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhH--HHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcc
Confidence 11222221 124456788999984 2222222221 111122334456678899999999
Q ss_pred cCCCCCC-----CHHHHHH
Q 048535 329 PEANSRP-----TIRQVLK 342 (409)
Q Consensus 329 ~dP~~RP-----t~~evl~ 342 (409)
.||.+|| ++.++++
T Consensus 232 ~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 232 KDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCHHHhCCCCCCCHHHHHc
Confidence 9999998 7888775
No 89
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.2e-32 Score=258.23 Aligned_cols=228 Identities=24% Similarity=0.431 Sum_probs=173.7
Q ss_pred CCccceeecCCceEEEEEEEC-----CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCC-----
Q 048535 115 FSEENVIGLGGNGKVYKGQLL-----GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE----- 182 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----- 182 (409)
|++.+.||+|+||.||+|... +..||+|+++.. .......+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567889999999999999875 367999999754 34456789999999999999999999998865322
Q ss_pred eEEEEEEeCCCCCHHHHHhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecc
Q 048535 183 SLILIYDYMENGSLDKWIFECD---ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDF 259 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DF 259 (409)
..++++||+++|+|..++.... ....+++..+..++.|++.||.||| +.+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 3789999999999999985431 2346899999999999999999999 899999999999999999999999999
Q ss_pred cCcccccCCce------eeecc---cc---ccCCCcHHHHHHhhhccCcHHHHhh----------------HHhh-hcCC
Q 048535 260 GLAKMHHHGQV------MSGRR---PI---EEGKRNLVDRMWSLTERSELLSVLD----------------ERLK-AKGG 310 (409)
Q Consensus 260 Gla~~~~~~~~------~~g~~---p~---~~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~-~~~~ 310 (409)
|+++....... ..+.. +. ....++..+|+|+++ ..+++++. .... ....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG--~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 235 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFG--VTMWEIATRGQTPYPGVENHEIYDYLRHGNRLK 235 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHH--HHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 99986543221 01111 11 123455678888874 12222221 1111 0112
Q ss_pred CCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 311 YADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 311 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
.+...+..+.+++.+||+.||++|||+.|+++.|++.
T Consensus 236 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 236 QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 3344567899999999999999999999999999864
No 90
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.4e-32 Score=259.51 Aligned_cols=231 Identities=22% Similarity=0.369 Sum_probs=177.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC--Cc----EEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GV----EVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESL 184 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~----~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 184 (409)
.++|+..+.||+|+||+||+|++. +. .||+|.++.. .....+.+.+|+.+++.++||||+++++++.. ...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~ 83 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT--STV 83 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC--CCc
Confidence 357888899999999999999874 43 5899999754 44456789999999999999999999999875 457
Q ss_pred EEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 185 ILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
++++||+++|+|.+++... ...+++..++.++.|++.||.||| +++|+||||||+|||+++++.+||+|||+++.
T Consensus 84 ~l~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 84 QLVTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceee
Confidence 7999999999999999643 346899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCce---eee------ccccc---cCCCcHHHHHHhhhccCcHHHHhh-H--------------Hhhh--cCCCCHHH
Q 048535 265 HHHGQV---MSG------RRPIE---EGKRNLVDRMWSLTERSELLSVLD-E--------------RLKA--KGGYADEV 315 (409)
Q Consensus 265 ~~~~~~---~~g------~~p~~---~~~~~~~~~vws~~~~~~~~~~~~-~--------------~l~~--~~~~~~~~ 315 (409)
...... ..+ ..+.+ ...++...|+|+++ ..+++++. . .+.. ....+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG--~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYG--VTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPIC 236 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHH--HHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccC
Confidence 643221 000 11111 23456778999974 12222221 0 0100 01223344
Q ss_pred HHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCCC
Q 048535 316 VEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEGT 351 (409)
Q Consensus 316 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 351 (409)
...+.+++..||+.||++||++.++++.|+.....+
T Consensus 237 ~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 237 TIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 567889999999999999999999999998776554
No 91
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-34 Score=276.31 Aligned_cols=213 Identities=22% Similarity=0.366 Sum_probs=169.4
Q ss_pred cceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCCHH
Q 048535 118 ENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGSLD 197 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gsL~ 197 (409)
.+.||+|+-|.||+|++.++.||||+++.-. ..+|+-|++|+||||+.+.|+|.. ...+|||||||+.|-|+
T Consensus 129 LeWlGSGaQGAVF~Grl~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtq-sPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLHNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQ-SPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeeccCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecC-CceeEEeeeccccccHH
Confidence 4789999999999999999999999986332 257888999999999999999998 77899999999999999
Q ss_pred HHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---eeeec
Q 048535 198 KWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ---VMSGR 274 (409)
Q Consensus 198 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~---~~~g~ 274 (409)
+.|+ ....++....+.|..+||.||.||| .+.|||||||.-||||..+-.+||+|||.++....-. -++|.
T Consensus 201 ~VLk---a~~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGT 274 (904)
T KOG4721|consen 201 EVLK---AGRPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGT 274 (904)
T ss_pred HHHh---ccCccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhh
Confidence 9995 4567899999999999999999999 8999999999999999999999999999998754321 12232
Q ss_pred ccc------cc-------CCCcHHHHHHhhhccCcHHHHhhH----------HhhhcCCCCHHHHHHHHHHHHHccCcCC
Q 048535 275 RPI------EE-------GKRNLVDRMWSLTERSELLSVLDE----------RLKAKGGYADEVVEKVLHLGLLCAHPEA 331 (409)
Q Consensus 275 ~p~------~~-------~~~~~~~~vws~~~~~~~~~~~~~----------~l~~~~~~~~~~~~~l~~l~~~Cl~~dP 331 (409)
... .. +.+++..-+|++...+..+.-+|. .+. ...+..+++-+.-|+.+||+..|
T Consensus 275 VaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~--LpvPstcP~GfklL~Kqcw~sKp 352 (904)
T KOG4721|consen 275 VAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLH--LPVPSTCPDGFKLLLKQCWNSKP 352 (904)
T ss_pred HhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCccc--ccCcccCchHHHHHHHHHHhcCC
Confidence 221 12 334444444554444333332322 111 23466778889999999999999
Q ss_pred CCCCCHHHHHHHHhc
Q 048535 332 NSRPTIRQVLKMLEG 346 (409)
Q Consensus 332 ~~RPt~~evl~~L~~ 346 (409)
.+||++++++..|+=
T Consensus 353 RNRPSFrqil~HldI 367 (904)
T KOG4721|consen 353 RNRPSFRQILLHLDI 367 (904)
T ss_pred CCCccHHHHHHHHhh
Confidence 999999999999864
No 92
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.4e-32 Score=261.64 Aligned_cols=228 Identities=25% Similarity=0.428 Sum_probs=173.3
Q ss_pred CCCCccceeecCCceEEEEEEECC----------------cEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEee
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLLG----------------VEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRG 175 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~~----------------~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g 175 (409)
++|++.+.||+|+||.||++...+ ..||+|.++.. .......|.+|++++++++|+||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578889999999999999987642 35899999765 3445567999999999999999999999
Q ss_pred EEEccCCeEEEEEEeCCCCCHHHHHhcCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCe
Q 048535 176 WCKKEKESLILIYDYMENGSLDKWIFECD---------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNV 246 (409)
Q Consensus 176 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NI 246 (409)
++.. .+..++||||+++++|.+++.... ....+++..+..++.|++.||+||| +.+++||||||+||
T Consensus 85 ~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Ni 160 (295)
T cd05097 85 VCVS-DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNC 160 (295)
T ss_pred EEcC-CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhE
Confidence 9987 678899999999999999985421 1124789999999999999999999 89999999999999
Q ss_pred eeCCCCcEEEecccCcccccCCce--eeec-------ccc---ccCCCcHHHHHHhhhccCcHHHHhh------------
Q 048535 247 LLDKKMNARLGDFGLAKMHHHGQV--MSGR-------RPI---EEGKRNLVDRMWSLTERSELLSVLD------------ 302 (409)
Q Consensus 247 Ll~~~~~~kl~DFGla~~~~~~~~--~~g~-------~p~---~~~~~~~~~~vws~~~~~~~~~~~~------------ 302 (409)
|+++++.+||+|||+++....... ..+. .+. ....++...|+|+++. .+++++.
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~--~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGV--TLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHH--HHHHHHHcCCCCCCcccCh
Confidence 999999999999999976543221 1111 111 1244577889999741 1111111
Q ss_pred -----HHh---h-----hcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 303 -----ERL---K-----AKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 303 -----~~l---~-----~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
... . .....+...+..+.+++.+||+.||++|||+.+|++.|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 239 EQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 000 0 0001122234678999999999999999999999999863
No 93
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.6e-33 Score=272.10 Aligned_cols=218 Identities=25% Similarity=0.357 Sum_probs=163.7
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
++|+..+.||+|+||.||+|++. ++.||||++... .......+.+|++++++++|+||+++++++.. .+..++|||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 152 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDH-NGEIQVLLE 152 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-CCeEEEEEe
Confidence 34556788999999999999986 899999999654 33445679999999999999999999999877 778999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|.+.. ...+..+..++.||+.||.||| +.+|+||||||+|||+++++.+||+|||+++......
T Consensus 153 ~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 153 FMDGGSLEGTH-------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred cCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 99999986532 3567788899999999999999 8999999999999999999999999999998654321
Q ss_pred ----eeeecccc---cc--------CCCcHHHHHHhhhccCcHHHHhhHHhhh-------------------cCCCCHHH
Q 048535 270 ----VMSGRRPI---EE--------GKRNLVDRMWSLTERSELLSVLDERLKA-------------------KGGYADEV 315 (409)
Q Consensus 270 ----~~~g~~p~---~~--------~~~~~~~~vws~~~~~~~~~~~~~~l~~-------------------~~~~~~~~ 315 (409)
...|...+ +. ...+...|+|+++ ..+++++...... ....+...
T Consensus 223 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslG--vil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (353)
T PLN00034 223 DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLG--VSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATA 300 (353)
T ss_pred ccccccccCccccCccccccccccCcCCCcchhHHHHH--HHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCcc
Confidence 11222221 10 1123478999985 2233333222211 01122334
Q ss_pred HHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 048535 316 VEKVLHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 316 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
..++.+++.+||+.||++|||+.|+++.
T Consensus 301 ~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 301 SREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 4567888888888888888888888763
No 94
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=8e-33 Score=267.73 Aligned_cols=216 Identities=20% Similarity=0.273 Sum_probs=167.4
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMEN 193 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~ 193 (409)
+.||+|+||.||++... ++.||+|++... .......+.+|+.+++.++||||+++++++.. .+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT-KDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-CCEEEEEEeCCCC
Confidence 46999999999999886 899999999754 23445678899999999999999999998887 7789999999999
Q ss_pred CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc----
Q 048535 194 GSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ---- 269 (409)
Q Consensus 194 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~---- 269 (409)
|+|.+++.. ...+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 80 g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 153 (328)
T cd05593 80 GELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMK 153 (328)
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccc
Confidence 999998853 346899999999999999999999 8999999999999999999999999999997532211
Q ss_pred eeeeccccc------cCCCcHHHHHHhhhccCcHHHHhhHHh---------------hhcCCCCHHHHHHHHHHHHHccC
Q 048535 270 VMSGRRPIE------EGKRNLVDRMWSLTERSELLSVLDERL---------------KAKGGYADEVVEKVLHLGLLCAH 328 (409)
Q Consensus 270 ~~~g~~p~~------~~~~~~~~~vws~~~~~~~~~~~~~~l---------------~~~~~~~~~~~~~l~~l~~~Cl~ 328 (409)
...|...+. ...++...|+|+++ ..+++++.... .....++......+.+++.+||+
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG--vil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~ 231 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLG--VVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLI 231 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccc--hHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcC
Confidence 122332221 23456677888874 22222222221 11122333445678899999999
Q ss_pred cCCCCCC-----CHHHHHHH
Q 048535 329 PEANSRP-----TIRQVLKM 343 (409)
Q Consensus 329 ~dP~~RP-----t~~evl~~ 343 (409)
.||++|| ++.|+++.
T Consensus 232 ~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 232 KDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCHHHcCCCCCCCHHHHhcC
Confidence 9999997 88888753
No 95
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.2e-32 Score=261.35 Aligned_cols=231 Identities=22% Similarity=0.370 Sum_probs=176.0
Q ss_pred HhCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCC
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE 182 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 182 (409)
.+++|++.+.||+|+||.||+|... +..||+|.++... ......+.+|+.++++++||||+++++++.+ ..
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~ 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSK-GQ 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CC
Confidence 4578999999999999999999753 4579999986543 3344578899999999999999999999887 66
Q ss_pred eEEEEEEeCCCCCHHHHHhcCC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEE
Q 048535 183 SLILIYDYMENGSLDKWIFECD-------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNAR 255 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~k 255 (409)
..++||||+++|+|.+++.... ....+++..+..++.|++.||.||| +++|+||||||+|||+++++.+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEE
Confidence 7899999999999999996421 1234577889999999999999999 89999999999999999999999
Q ss_pred EecccCcccccCCcee-e--------ecccc---ccCCCcHHHHHHhhhccCcHHHHh----------------hHHhhh
Q 048535 256 LGDFGLAKMHHHGQVM-S--------GRRPI---EEGKRNLVDRMWSLTERSELLSVL----------------DERLKA 307 (409)
Q Consensus 256 l~DFGla~~~~~~~~~-~--------g~~p~---~~~~~~~~~~vws~~~~~~~~~~~----------------~~~l~~ 307 (409)
|+|||+++........ . ...+. ....++..+|+|+++. .+++++ +.....
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~--~l~el~~~~~~p~~~~~~~~~~~~~~~~ 237 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV--VLWEITSLAEQPYQGLSNEQVLKFVMDG 237 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHH--HHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999854332210 0 01111 1245577889999741 112221 111110
Q ss_pred -cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 308 -KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 308 -~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
....+......+.+++.+||+.||++|||+.++++.|++.
T Consensus 238 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 238 GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 0122334457899999999999999999999999998864
No 96
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.3e-32 Score=256.43 Aligned_cols=218 Identities=25% Similarity=0.359 Sum_probs=169.1
Q ss_pred eeecCCceEEEEEEEC----CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCC
Q 048535 120 VIGLGGNGKVYKGQLL----GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMEN 193 (409)
Q Consensus 120 ~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~ 193 (409)
+||+|+||.||+|.+. +..+|+|+++.. .....+++.+|+.++++++||||+++++++.. ...++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA--ESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCcEEEEecCCC
Confidence 5899999999999763 678999998654 33456789999999999999999999998853 467899999999
Q ss_pred CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce---
Q 048535 194 GSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV--- 270 (409)
Q Consensus 194 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~--- 270 (409)
|+|.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 80 GPLNKFLQK---NKHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 999999953 346899999999999999999999 89999999999999999999999999999987543321
Q ss_pred --eeec-----cccc---cCCCcHHHHHHhhhccCcHHHHhh-HHhh----------------hcCCCCHHHHHHHHHHH
Q 048535 271 --MSGR-----RPIE---EGKRNLVDRMWSLTERSELLSVLD-ERLK----------------AKGGYADEVVEKVLHLG 323 (409)
Q Consensus 271 --~~g~-----~p~~---~~~~~~~~~vws~~~~~~~~~~~~-~~l~----------------~~~~~~~~~~~~l~~l~ 323 (409)
..+. .+.+ ...++..+|+|+++ ..+++++. .... ...+.+...+..+.+++
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li 231 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFG--VLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLM 231 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHH--HHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Confidence 0111 0111 13455678999873 11222221 1110 01233445567889999
Q ss_pred HHccCcCCCCCCCHHHHHHHHhcC
Q 048535 324 LLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 324 ~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
.+||+.||++||++.+|.+.|++.
T Consensus 232 ~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 232 KLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHHhccCchhCcCHHHHHHHHhcc
Confidence 999999999999999999999864
No 97
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.4e-32 Score=261.27 Aligned_cols=232 Identities=23% Similarity=0.398 Sum_probs=179.3
Q ss_pred CCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
.+|...+.||+|+||.||+|... +..+++|.+........+.+.+|++++++++|+||+++++++.. ....+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 83 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGD-GDPLI 83 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc-CCceE
Confidence 45777899999999999999753 45699999987666666789999999999999999999999987 67789
Q ss_pred EEEEeCCCCCHHHHHhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC
Q 048535 186 LIYDYMENGSLDKWIFECD-------------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM 252 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~ 252 (409)
+||||+++++|.+++.... ....+++..++.++.|++.||+||| +++|+||||||+|||++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCC
Confidence 9999999999999996432 1235899999999999999999999 89999999999999999999
Q ss_pred cEEEecccCcccccCCce------eee---ccccc---cCCCcHHHHHHhhhccCcHHHHhh-HHhh-------------
Q 048535 253 NARLGDFGLAKMHHHGQV------MSG---RRPIE---EGKRNLVDRMWSLTERSELLSVLD-ERLK------------- 306 (409)
Q Consensus 253 ~~kl~DFGla~~~~~~~~------~~g---~~p~~---~~~~~~~~~vws~~~~~~~~~~~~-~~l~------------- 306 (409)
.+||+|||+++....... ..+ ..+.+ ...++..+|+|+++ ..+++++. ....
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~il~el~t~g~~p~~~~~~~~~~~~~ 238 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG--VILWEIFTYGKQPWFQLSNTEVIECI 238 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHH--HHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 999999999976533211 001 11111 23456678999874 12222221 1111
Q ss_pred --h-cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCC
Q 048535 307 --A-KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEG 350 (409)
Q Consensus 307 --~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 350 (409)
. ....+...+..+.+++.+||+.+|++|||+++++++|+.+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 239 TQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred hCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 0 0112233456789999999999999999999999999887543
No 98
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.3e-32 Score=259.32 Aligned_cols=232 Identities=23% Similarity=0.434 Sum_probs=179.5
Q ss_pred CCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
++|.+.+.||+|+||.||++... +..+|+|.+........+.+.+|++++++++||||+++++++.. .+..+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 83 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-GDPLI 83 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCccE
Confidence 57888999999999999999752 45699999987666667789999999999999999999999987 67899
Q ss_pred EEEEeCCCCCHHHHHhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEE
Q 048535 186 LIYDYMENGSLDKWIFECD----------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNAR 255 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~k 255 (409)
+||||+++|+|.+++.... ....+++..+..++.|++.||+||| +.+++||||||+|||+++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEE
Confidence 9999999999999996431 1235899999999999999999999 89999999999999999999999
Q ss_pred EecccCcccccCCce--eee-------cccc---ccCCCcHHHHHHhhhccCcHHHHhh----------------HHhhh
Q 048535 256 LGDFGLAKMHHHGQV--MSG-------RRPI---EEGKRNLVDRMWSLTERSELLSVLD----------------ERLKA 307 (409)
Q Consensus 256 l~DFGla~~~~~~~~--~~g-------~~p~---~~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~~ 307 (409)
|+|||+++....... ..+ ..+. ....++..+|+|+++ ..+++++. .....
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG--~il~~l~t~g~~p~~~~~~~~~~~~i~~~ 238 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLG--VVLWEIFTYGKQPWYQLSNNEVIECITQG 238 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHH--HHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 999999986533221 011 1111 124456789999973 11222221 11110
Q ss_pred c-CCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCC
Q 048535 308 K-GGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEG 350 (409)
Q Consensus 308 ~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 350 (409)
. ...+......+.+++.+||+.||.+|||+.++++.|+++...
T Consensus 239 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 239 RVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 0 111223456789999999999999999999999999876543
No 99
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.5e-32 Score=255.92 Aligned_cols=228 Identities=27% Similarity=0.499 Sum_probs=176.8
Q ss_pred hCCCCccceeecCCceEEEEEEEC--C---cEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--G---VEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~---~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
+++|+..+.||+|+||.||+|... + ..+|+|.+... .....+.+.+|++++++++||||+++++++.. .+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 82 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK-FKPAM 82 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc-CCCcE
Confidence 356788899999999999999875 3 37999999765 34456789999999999999999999999987 67889
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
+||||+++|+|.+++... ...+++.++..++.|++.||+||| +.+++||||||+||++++++.+||+|||++...
T Consensus 83 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 83 IITEYMENGALDKYLRDH--DGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceec
Confidence 999999999999999642 346899999999999999999999 899999999999999999999999999999765
Q ss_pred cCCc--eee--------eccccc---cCCCcHHHHHHhhhccCcHHHHhh-HH--------------hh--hcCCCCHHH
Q 048535 266 HHGQ--VMS--------GRRPIE---EGKRNLVDRMWSLTERSELLSVLD-ER--------------LK--AKGGYADEV 315 (409)
Q Consensus 266 ~~~~--~~~--------g~~p~~---~~~~~~~~~vws~~~~~~~~~~~~-~~--------------l~--~~~~~~~~~ 315 (409)
.... ..+ ...+.+ ...++...|+|+++ ..+++++. .. +. ...+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG--~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 235 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFG--IVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDC 235 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHH--HHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCC
Confidence 4321 000 011111 23456778999873 11222111 11 00 011223344
Q ss_pred HHHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 316 VEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 316 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
...+.+++.+||+.+|++||++.++++.|+++
T Consensus 236 ~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 236 PSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 56789999999999999999999999999864
No 100
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.1e-32 Score=260.15 Aligned_cols=232 Identities=22% Similarity=0.363 Sum_probs=179.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL------GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESL 184 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 184 (409)
.++|+..+.||+|+||.||+|.+. +..|++|++... .....+.+.+|+.++++++||||+++++++...+...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 467888999999999999999875 377999998754 4455677999999999999999999999988756778
Q ss_pred EEEEEeCCCCCHHHHHhcCCCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecc
Q 048535 185 ILIYDYMENGSLDKWIFECDES-----IALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDF 259 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DF 259 (409)
++++||+++|+|.+++...... ..+++..+..++.|++.||+||| +.+++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999998654222 46899999999999999999999 899999999999999999999999999
Q ss_pred cCcccccCCcee------ee---ccccc---cCCCcHHHHHHhhhccCcHHHHhh-H--------------Hhhh--cCC
Q 048535 260 GLAKMHHHGQVM------SG---RRPIE---EGKRNLVDRMWSLTERSELLSVLD-E--------------RLKA--KGG 310 (409)
Q Consensus 260 Gla~~~~~~~~~------~g---~~p~~---~~~~~~~~~vws~~~~~~~~~~~~-~--------------~l~~--~~~ 310 (409)
|+++....+... .+ ..+.+ ...++..+|+|+++. .+++++. . .+.. ...
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~--~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 239 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGV--LLWELMTLGQTPYVEIDPFEMAAYLKDGYRLA 239 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHH--HHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCC
Confidence 999865432211 01 11111 234567789998741 1222211 0 0100 011
Q ss_pred CCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCc
Q 048535 311 YADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQT 348 (409)
Q Consensus 311 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 348 (409)
.+...+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 240 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 240 QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 22334567899999999999999999999999998654
No 101
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.3e-32 Score=270.46 Aligned_cols=263 Identities=17% Similarity=0.171 Sum_probs=182.1
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
.++|++.+.||+|+||.||++... ++.||+|... ...+.+|++++++++|||||++++++.. ....++|+|
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~lv~e 163 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTY-NKFTCLILP 163 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEE-CCeeEEEEe
Confidence 367999999999999999999986 8899999753 2356789999999999999999999987 678899999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
++. ++|..++.. ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+|+......
T Consensus 164 ~~~-~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 164 RYK-TDLYCYLAA---KRNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred cCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 995 699998853 346899999999999999999999 8899999999999999999999999999997532211
Q ss_pred -----eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCC--C-HHHHHHHHHHHHHccCcCCCCCC
Q 048535 270 -----VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGY--A-DEVVEKVLHLGLLCAHPEANSRP 335 (409)
Q Consensus 270 -----~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~--~-~~~~~~l~~l~~~Cl~~dP~~RP 335 (409)
...|...+ ....++...|+|+++ ..+++++.......... . .......+..+..++...|.+.|
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG--vil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAG--IVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHH--HHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 11222221 124567889999996 34555544321100000 0 00011112222223333333333
Q ss_pred C-----HHHHH-HHHhcCcCCCCCC--------CCCcchhHHhhhcccCCCCcccccccCCCCCccccc
Q 048535 336 T-----IRQVL-KMLEGQTEGTGLE--------DEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEIN 390 (409)
Q Consensus 336 t-----~~evl-~~L~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~ 390 (409)
. ..++. .........+... .+..-.+++.+|++.+|.+|.++.+++.||||.++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~ 383 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIP 383 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCC
Confidence 1 11111 1111111111000 011236789999999999999999999999998875
No 102
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=8.9e-33 Score=260.88 Aligned_cols=175 Identities=27% Similarity=0.387 Sum_probs=138.8
Q ss_pred eecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCC
Q 048535 121 IGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGS 195 (409)
Q Consensus 121 lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gs 195 (409)
||+|+||.||++... |+.||+|.+.... ....+.+..|++++++++||||+++++++.. +...++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~-~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES-KTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec-CCeEEEEEecCCCCC
Confidence 799999999999886 8999999996431 1223456679999999999999999998886 678999999999999
Q ss_pred HHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee---e
Q 048535 196 LDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM---S 272 (409)
Q Consensus 196 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~---~ 272 (409)
|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++......... .
T Consensus 80 L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 155 (277)
T cd05607 80 LKYHIYNV-GERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRA 155 (277)
T ss_pred HHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccC
Confidence 99988643 3345899999999999999999999 899999999999999999999999999999765443211 1
Q ss_pred ecccc------ccCCCcHHHHHHhhhccCcHHHHhh
Q 048535 273 GRRPI------EEGKRNLVDRMWSLTERSELLSVLD 302 (409)
Q Consensus 273 g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~ 302 (409)
|...+ ....++...|+|+++ ..+++++.
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslG--v~l~el~~ 189 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMG--CSIYEMVA 189 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHH--HHHHHHHh
Confidence 11111 123456778999985 33444443
No 103
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.6e-32 Score=258.70 Aligned_cols=228 Identities=23% Similarity=0.396 Sum_probs=176.6
Q ss_pred CCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccCChH-HHHHHHHHHHHhccCCCCceeeEeeEEEccCCeE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLDSEH-GMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESL 184 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 184 (409)
++|.+.+.||+|+||.||+|... +..||+|.++..... ..+.|.+|++++++++|+||+++++++.. ....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~ 83 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE-GDPP 83 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec-CCCe
Confidence 56788899999999999999864 367999999765433 56789999999999999999999999987 6789
Q ss_pred EEEEEeCCCCCHHHHHhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCc
Q 048535 185 ILIYDYMENGSLDKWIFECD-----------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMN 253 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~ 253 (409)
++||||+++|+|.+++.... ....+++.++..++.|++.||.||| +.+++||||||+|||++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCe
Confidence 99999999999999996532 1245889999999999999999999 899999999999999999999
Q ss_pred EEEecccCcccccCCcee--ee-------cccc---ccCCCcHHHHHHhhhccCcHHHHhh----------------HHh
Q 048535 254 ARLGDFGLAKMHHHGQVM--SG-------RRPI---EEGKRNLVDRMWSLTERSELLSVLD----------------ERL 305 (409)
Q Consensus 254 ~kl~DFGla~~~~~~~~~--~g-------~~p~---~~~~~~~~~~vws~~~~~~~~~~~~----------------~~l 305 (409)
+||+|||+++........ .+ ..+. ....++..+|+|+++ ..+++++. ...
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~il~e~~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG--VVLWEIFTYGKQPWYGLSNEEVIECIT 238 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHH--HHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 999999999754322110 00 1111 224556778999974 12222221 111
Q ss_pred hh-cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 306 KA-KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 306 ~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
.. ....+......+.+++.+||+.||++|||+.|+++.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 239 QGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred cCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 10 011233455688999999999999999999999999863
No 104
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.8e-32 Score=259.34 Aligned_cols=229 Identities=27% Similarity=0.411 Sum_probs=175.4
Q ss_pred hCCCCccceeecCCceEEEEEEEC------------------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceee
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL------------------GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVG 172 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~------------------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~ 172 (409)
.++|++.+.||+|+||.||++... +..||+|.+... .....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 467889999999999999998765 145899999765 3445678999999999999999999
Q ss_pred EeeEEEccCCeEEEEEEeCCCCCHHHHHhcCC--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCC
Q 048535 173 LRGWCKKEKESLILIYDYMENGSLDKWIFECD--------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKAS 244 (409)
Q Consensus 173 l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~ 244 (409)
+++++.. ++..+++|||+++++|.+++.... ....+++..+..++.|++.||+||| +.+|+||||||+
T Consensus 84 ~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~ 159 (296)
T cd05051 84 LLGVCTV-DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATR 159 (296)
T ss_pred EEEEEec-CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchh
Confidence 9999987 578999999999999999996532 1126899999999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccCcccccCCce--eee-------ccccc---cCCCcHHHHHHhhhccCcHHHHhh----------
Q 048535 245 NVLLDKKMNARLGDFGLAKMHHHGQV--MSG-------RRPIE---EGKRNLVDRMWSLTERSELLSVLD---------- 302 (409)
Q Consensus 245 NILl~~~~~~kl~DFGla~~~~~~~~--~~g-------~~p~~---~~~~~~~~~vws~~~~~~~~~~~~---------- 302 (409)
||+++.++.++|+|||+++....... ..+ ..+.+ ...++..+|+|+++. .+++++.
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~--~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGV--TLWEILTLCREQPYEHL 237 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHH--HHHHHHhcCCCCCCCCc
Confidence 99999999999999999986533221 111 11111 234567788998741 1222111
Q ss_pred -------HHhhh--------cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 303 -------ERLKA--------KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 303 -------~~l~~--------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
..... ....+...+.++.+++.+||+.||++|||+.|+++.|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 238 TDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred ChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 10000 011122234679999999999999999999999999863
No 105
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.1e-32 Score=261.38 Aligned_cols=264 Identities=21% Similarity=0.284 Sum_probs=185.5
Q ss_pred CCCCccceeecCCceEEEEEEEC---CcEEEEEEeccCC--hHHHHHHHHHHHHhccC---CCCceeeEeeEEEc----c
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL---GVEVALKRISLDS--EHGMREFLAEVSSLGRL---KHRNLVGLRGWCKK----E 180 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~---~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~----~ 180 (409)
++|+..+.||+|+||.||+|... ++.||+|.++... ......+.+|+.+++.+ +||||++++++|.. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 46888999999999999999874 6789999986542 22234566777776655 69999999998852 2
Q ss_pred CCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEeccc
Q 048535 181 KESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFG 260 (409)
Q Consensus 181 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFG 260 (409)
....++||||++ ++|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 456899999997 5999998653 2345899999999999999999999 8999999999999999999999999999
Q ss_pred CcccccCCce---eeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCC
Q 048535 261 LAKMHHHGQV---MSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEA 331 (409)
Q Consensus 261 la~~~~~~~~---~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP 331 (409)
+++....... ..|...+ ....++..+|+|+++ ..+++++.......+... ...+..++..+..+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG--~il~el~~g~~~f~~~~~---~~~~~~i~~~~~~~~~ 230 (290)
T cd07862 156 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG--CIFAEMFRRKPLFRGSSD---VDQLGKILDVIGLPGE 230 (290)
T ss_pred ceEeccCCcccccccccccccChHHHhCCCCCCccchHHHH--HHHHHHHcCCCCcCCCCH---HHHHHHHHHHhCCCCh
Confidence 9986543321 1122211 124456678999997 355566544333222222 2334455555555566
Q ss_pred CCCCCHHHHHHHHhcCcCCC-----CCCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 332 NSRPTIRQVLKMLEGQTEGT-----GLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 332 ~~RPt~~evl~~L~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
.++|....+.+..-...... .+..+....+++.+|++.+|.+|+++.+++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 231 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 66655432221110000000 00112234789999999999999999999999997
No 106
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.4e-32 Score=256.20 Aligned_cols=227 Identities=28% Similarity=0.480 Sum_probs=175.2
Q ss_pred CCCCccceeecCCceEEEEEEEC-----CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-----GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
++|++.+.||+|+||.||+|.+. +..+|+|.++.. .....+.|.+|+.++++++||||+++++++.. ++..++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 82 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-SKPVMI 82 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCccEE
Confidence 56788899999999999999874 337999998754 34456789999999999999999999999876 678999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
||||+++|+|.+++... ...+++.++..++.|++.||.||| +.+++||||||+|||++.++.+||+|||+++...
T Consensus 83 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 83 VTEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 99999999999999643 245899999999999999999999 8999999999999999999999999999998654
Q ss_pred CCc--eee--e------ccccc---cCCCcHHHHHHhhhccCcHHHHh----------------hHHhhh-cCCCCHHHH
Q 048535 267 HGQ--VMS--G------RRPIE---EGKRNLVDRMWSLTERSELLSVL----------------DERLKA-KGGYADEVV 316 (409)
Q Consensus 267 ~~~--~~~--g------~~p~~---~~~~~~~~~vws~~~~~~~~~~~----------------~~~l~~-~~~~~~~~~ 316 (409)
... ..+ + ..+.+ ...++...|+|+++ ..+++++ +..... ..+.+...+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG--~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYG--IVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCP 235 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHH--HHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCC
Confidence 321 111 0 11111 23456678999873 1111111 111100 011222345
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
..+.+++.+||+.+|.+||++.++++.|++.
T Consensus 236 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 236 AALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 6789999999999999999999999999864
No 107
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.8e-32 Score=254.09 Aligned_cols=232 Identities=24% Similarity=0.358 Sum_probs=179.0
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|+..+.||+|+||.||+|... ++.||+|.++.. .....+.+.+|++++++++|+||+++++++.. .+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-NNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec-CCeEEEE
Confidence 67899999999999999999987 899999988642 33446789999999999999999999999987 6789999
Q ss_pred EEeCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 188 YDYMENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
|||+++|+|.+++... .....+++.++..++.|+++||.||| +.+|+|+||||+||+++.++.++|+|||+++...
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 9999999999998653 22356899999999999999999999 8999999999999999999999999999987654
Q ss_pred CCc----eeeeccc---c---ccCCCcHHHHHHhhhcc---------------CcHHHHhhHHhhh-cCCCCH-HHHHHH
Q 048535 267 HGQ----VMSGRRP---I---EEGKRNLVDRMWSLTER---------------SELLSVLDERLKA-KGGYAD-EVVEKV 319 (409)
Q Consensus 267 ~~~----~~~g~~p---~---~~~~~~~~~~vws~~~~---------------~~~~~~~~~~l~~-~~~~~~-~~~~~l 319 (409)
... ...+... . ....++...|+|+++.- ....+..+..... ....+. .....+
T Consensus 158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd08224 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEEL 237 (267)
T ss_pred CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHH
Confidence 321 1112111 1 12345667889987311 0111111111110 011222 455678
Q ss_pred HHHHHHccCcCCCCCCCHHHHHHHHhcCc
Q 048535 320 LHLGLLCAHPEANSRPTIRQVLKMLEGQT 348 (409)
Q Consensus 320 ~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 348 (409)
.+++.+||+.+|++|||+.+++++|+++.
T Consensus 238 ~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 238 RDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 99999999999999999999999998653
No 108
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.6e-32 Score=260.24 Aligned_cols=232 Identities=26% Similarity=0.419 Sum_probs=176.5
Q ss_pred CCCCccceeecCCceEEEEEEEC--C--cEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--G--VEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~--~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~l 186 (409)
++|++.+.||+|+||.||+|... + ..+++|.++.. .....+.|.+|+.++.++ +||||+++++++.. .+..++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN-RGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc-CCcceE
Confidence 57888999999999999999886 3 35789988743 444567899999999999 79999999999877 677999
Q ss_pred EEEeCCCCCHHHHHhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCc
Q 048535 187 IYDYMENGSLDKWIFECD-------------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMN 253 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~ 253 (409)
++||+++|+|.+++.... ....+++..+..++.|++.||+||| +.+|+||||||+|||+++++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCe
Confidence 999999999999996431 1135889999999999999999999 899999999999999999999
Q ss_pred EEEecccCcccccCCc-eeee-----ccccc---cCCCcHHHHHHhhhccCcHHHHh----------------hHHhhh-
Q 048535 254 ARLGDFGLAKMHHHGQ-VMSG-----RRPIE---EGKRNLVDRMWSLTERSELLSVL----------------DERLKA- 307 (409)
Q Consensus 254 ~kl~DFGla~~~~~~~-~~~g-----~~p~~---~~~~~~~~~vws~~~~~~~~~~~----------------~~~l~~- 307 (409)
+||+|||++....... ...+ ..+.+ ...++..+|+|+++ ..+++++ ......
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG--~il~el~t~g~~pf~~~~~~~~~~~~~~~~ 235 (297)
T cd05089 158 SKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFG--VLLWEIVSLGGTPYCGMTCAELYEKLPQGY 235 (297)
T ss_pred EEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHH--HHHHHHHcCCCCCCCCCCHHHHHHHHhcCC
Confidence 9999999986432210 0011 11111 23456789999974 1222222 111110
Q ss_pred cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCC
Q 048535 308 KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEG 350 (409)
Q Consensus 308 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 350 (409)
....+......+.+++.+||+.+|.+|||+.++++.|++....
T Consensus 236 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 236 RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 0112334556789999999999999999999999998876543
No 109
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.7e-32 Score=255.63 Aligned_cols=223 Identities=25% Similarity=0.386 Sum_probs=172.6
Q ss_pred CCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
.+|+..+.||+|+||.||+|.+. +..+|+|.+.... .....|.+|++++++++||||+++++++.. ....++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~ 81 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTK-QRPIFIVTEYM 81 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcC-CCceEEEEecC
Confidence 35778899999999999999887 5689999986432 233578899999999999999999999876 67889999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM 271 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 271 (409)
++++|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||++++++.+||+|||+++........
T Consensus 82 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~ 156 (256)
T cd05059 82 ANGCLLNYLRER--KGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156 (256)
T ss_pred CCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence 999999999643 236899999999999999999999 899999999999999999999999999999865432211
Q ss_pred ee--------cccc---ccCCCcHHHHHHhhhccCcHHHHhh----------------HHhhh-cCCCCHHHHHHHHHHH
Q 048535 272 SG--------RRPI---EEGKRNLVDRMWSLTERSELLSVLD----------------ERLKA-KGGYADEVVEKVLHLG 323 (409)
Q Consensus 272 ~g--------~~p~---~~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~~-~~~~~~~~~~~l~~l~ 323 (409)
+. ..+. ....++..+|+|+++. .+++++. ..... ....+...+.++.+++
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~--il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 234 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGV--LMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIM 234 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHH--HHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHH
Confidence 11 1111 1244566789998731 1111111 11000 0122233566899999
Q ss_pred HHccCcCCCCCCCHHHHHHHH
Q 048535 324 LLCAHPEANSRPTIRQVLKML 344 (409)
Q Consensus 324 ~~Cl~~dP~~RPt~~evl~~L 344 (409)
.+||+.+|++|||+.|+++.|
T Consensus 235 ~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 235 YSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHhcCChhhCcCHHHHHHHh
Confidence 999999999999999999987
No 110
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-32 Score=262.68 Aligned_cols=235 Identities=22% Similarity=0.373 Sum_probs=178.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC---------CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEcc
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL---------GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKE 180 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 180 (409)
..+|.+.+.||+|+||.||+|... +..||+|.+... .....+.+.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~- 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec-
Confidence 467888899999999999999752 347999998754 344567899999999999 89999999999987
Q ss_pred CCeEEEEEEeCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCee
Q 048535 181 KESLILIYDYMENGSLDKWIFECDE-------------SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVL 247 (409)
Q Consensus 181 ~~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 247 (409)
....+++|||+++|+|.+++..... ...+++.++..++.|+++||.||| +++|+||||||+|||
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEE
Confidence 6788999999999999999975321 235889999999999999999999 899999999999999
Q ss_pred eCCCCcEEEecccCcccccCCce----eee-----ccccc---cCCCcHHHHHHhhhcc-------C-------cHHHHh
Q 048535 248 LDKKMNARLGDFGLAKMHHHGQV----MSG-----RRPIE---EGKRNLVDRMWSLTER-------S-------ELLSVL 301 (409)
Q Consensus 248 l~~~~~~kl~DFGla~~~~~~~~----~~g-----~~p~~---~~~~~~~~~vws~~~~-------~-------~~~~~~ 301 (409)
+++++.+||+|||+++....... ..+ ..+.+ ...++..+|+|+++.. + ...++.
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~ 249 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 249 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence 99999999999999986543210 011 11111 2345677899987411 0 111111
Q ss_pred hHHhhh-cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCC
Q 048535 302 DERLKA-KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEG 350 (409)
Q Consensus 302 ~~~l~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 350 (409)
...... ....+...+..+.+++.+||+.+|.+|||+.|+++.|+++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 250 KLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 111100 0112334556789999999999999999999999999876554
No 111
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.6e-32 Score=254.81 Aligned_cols=223 Identities=26% Similarity=0.403 Sum_probs=169.9
Q ss_pred ceeecCCceEEEEEEEC-----CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL-----GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||+|.+. +..||+|.+... .....+.+.+|+.+++.++||||+++++++...++..+++|||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999864 357999998543 445567899999999999999999999988754667889999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee-
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM- 271 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~- 271 (409)
+|+|.+++... ...+++..+..++.|++.||.||| +.+++||||||+|||+++++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 81 HGDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 99999999642 234688888999999999999999 899999999999999999999999999999754322100
Q ss_pred -------ee---cccc---ccCCCcHHHHHHhhhccCcHHHHhhH----------------Hhhh-cCCCCHHHHHHHHH
Q 048535 272 -------SG---RRPI---EEGKRNLVDRMWSLTERSELLSVLDE----------------RLKA-KGGYADEVVEKVLH 321 (409)
Q Consensus 272 -------~g---~~p~---~~~~~~~~~~vws~~~~~~~~~~~~~----------------~l~~-~~~~~~~~~~~l~~ 321 (409)
.+ ..+. ....++...|+|+++ ..+++++.. .... ....+...+..+.+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFG--VLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYE 233 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHH--HHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHH
Confidence 00 0111 124556789999974 122222221 1100 01122234567899
Q ss_pred HHHHccCcCCCCCCCHHHHHHHHhcCc
Q 048535 322 LGLLCAHPEANSRPTIRQVLKMLEGQT 348 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt~~evl~~L~~~~ 348 (409)
++..||+.+|++||++.++++.|++..
T Consensus 234 li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 234 VMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 999999999999999999999998653
No 112
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=9.6e-33 Score=267.20 Aligned_cols=149 Identities=23% Similarity=0.271 Sum_probs=132.9
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|+..+.||+|+||.||++... ++.||+|+++.. .....+.+.+|+.+++.++||||+++++++.+ .+..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-KDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec-CCeEEEE
Confidence 47889999999999999999986 889999999754 22345678899999999999999999998887 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++|+|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 80 MEYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred ECCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 9999999999999653 246999999999999999999999 89999999999999999999999999999987654
No 113
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.5e-32 Score=264.76 Aligned_cols=267 Identities=21% Similarity=0.270 Sum_probs=184.4
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC----CeEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK----ESLI 185 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~ 185 (409)
+|++.+.||+|+||.||+|... +..||||++... .......+.+|+.++++++||||+++++++.... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4778899999999999999986 899999998643 2334567899999999999999999999886422 3589
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
+|||||+ ++|.+++.. ...+++..+..++.|+++||.||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIKA---NDDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHHh---cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999995 699999853 346899999999999999999999 899999999999999999999999999999854
Q ss_pred cCCc-------eeeecccc---c---c--CCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcC
Q 048535 266 HHGQ-------VMSGRRPI---E---E--GKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPE 330 (409)
Q Consensus 266 ~~~~-------~~~g~~p~---~---~--~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~d 330 (409)
.... ...|...+ + . ..++...|+|+++ ..+++++.......+.. ......++..+....
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlG--vvl~el~tg~~pf~~~~----~~~~~~~~~~~~~~~ 227 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIG--CIFAEVLTGKPLFPGKN----VVHQLDLITDLLGTP 227 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHH--HHHHHHHcCCCCCCCCC----hHHHHHHHHHHhCCC
Confidence 3211 01122111 1 1 3456789999996 34555555433221111 111222222222221
Q ss_pred CCCC------CCHHHHHHHHhcCcCCCC----CCCCCcchhHHhhhcccCCCCcccccccCCCCCcccccccc
Q 048535 331 ANSR------PTIRQVLKMLEGQTEGTG----LEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINKNR 393 (409)
Q Consensus 331 P~~R------Pt~~evl~~L~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~~~ 393 (409)
|... ....+.+..+......+. +.-+....+++.+|+..+|..|++.++++.||||+.+....
T Consensus 228 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~ 300 (338)
T cd07859 228 SPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVE 300 (338)
T ss_pred CHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCccc
Confidence 1110 011122222221111100 00111236899999999999999999999999999877543
No 114
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.4e-32 Score=260.21 Aligned_cols=229 Identities=26% Similarity=0.437 Sum_probs=174.3
Q ss_pred hCCCCccceeecCCceEEEEEEEC------------------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceee
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL------------------GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVG 172 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~------------------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~ 172 (409)
.++|++.+.||+|+||.||++... +..||+|.+... .......|.+|+.++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 356889999999999999998542 346999999755 3445678999999999999999999
Q ss_pred EeeEEEccCCeEEEEEEeCCCCCHHHHHhcCCC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCC
Q 048535 173 LRGWCKKEKESLILIYDYMENGSLDKWIFECDE--------SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKAS 244 (409)
Q Consensus 173 l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~ 244 (409)
+++++.. .+..+++|||+++|+|.+++..... ...+++.++..++.|++.||+||| +.+++||||||+
T Consensus 84 ~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~ 159 (296)
T cd05095 84 LLAVCIT-SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATR 159 (296)
T ss_pred EEEEEec-CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChh
Confidence 9999987 6778999999999999999865321 124788899999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccCcccccCCce--eeecc--------c--cccCCCcHHHHHHhhhccCcHHHHhh----------
Q 048535 245 NVLLDKKMNARLGDFGLAKMHHHGQV--MSGRR--------P--IEEGKRNLVDRMWSLTERSELLSVLD---------- 302 (409)
Q Consensus 245 NILl~~~~~~kl~DFGla~~~~~~~~--~~g~~--------p--~~~~~~~~~~~vws~~~~~~~~~~~~---------- 302 (409)
|||++.++.+||+|||+++....... ..+.. | ...+.++..+|+|+++ ..+++++.
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG--~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFG--VTLWEILTLCKEQPYSQL 237 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHH--HHHHHHHHhCCCCCcccc
Confidence 99999999999999999986533221 11110 0 1124456788999974 12222221
Q ss_pred -------HH---h-----hhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 303 -------ER---L-----KAKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 303 -------~~---l-----~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
.. . ....+.+..++..+.+++.+||+.||++|||+.++++.|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 238 SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 00 0 00011122345678999999999999999999999999863
No 115
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.3e-32 Score=276.37 Aligned_cols=223 Identities=22% Similarity=0.255 Sum_probs=175.6
Q ss_pred CCCccceeecCCceEEEEEEEC---CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL---GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
.|...+.||+|+||.||+|... +..||+|.+..........+.+|+.+|+.++|||||++++++.. .+..+|||||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-~~~~~lv~E~ 146 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKS-DDKLLLIMEY 146 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE-CCEEEEEEEC
Confidence 4888999999999999999875 56799998876666666678899999999999999999999987 7789999999
Q ss_pred CCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 191 MENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 191 ~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
+++|+|.+++... .....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 9999999988642 23456899999999999999999999 8999999999999999999999999999998754321
Q ss_pred ------eeeecccc------ccCCCcHHHHHHhhhccCcHHHH---------------hhHHhhhc-CCCCHHHHHHHHH
Q 048535 270 ------VMSGRRPI------EEGKRNLVDRMWSLTERSELLSV---------------LDERLKAK-GGYADEVVEKVLH 321 (409)
Q Consensus 270 ------~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~---------------~~~~l~~~-~~~~~~~~~~l~~ 321 (409)
...|...+ ....++...|+|+++ ..++++ +...+... ...+......+.+
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG--~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 301 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLG--VILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKA 301 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHH--HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHH
Confidence 11232222 124567789999984 122222 22222110 1223345567899
Q ss_pred HHHHccCcCCCCCCCHHHHHH
Q 048535 322 LGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt~~evl~ 342 (409)
++..||+.||++||++.+++.
T Consensus 302 li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 302 LLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHhccChhhCcCHHHHHh
Confidence 999999999999999999864
No 116
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4.1e-32 Score=254.27 Aligned_cols=219 Identities=23% Similarity=0.377 Sum_probs=166.2
Q ss_pred ceeecCCceEEEEEEEC--------------CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeE
Q 048535 119 NVIGLGGNGKVYKGQLL--------------GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESL 184 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--------------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 184 (409)
+.||+|+||.||+|+.. ...||+|.+..........|.+|+.+++.++||||+++++++.. ....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~-~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVR-DVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCCC
Confidence 46899999999999853 23589999876655556688999999999999999999999987 6678
Q ss_pred EEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCc-------EEEe
Q 048535 185 ILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMN-------ARLG 257 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~-------~kl~ 257 (409)
++||||+++|+|..++... ...+++..+..++.||++||+||| +++|+||||||+|||++.++. +|++
T Consensus 80 ~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRK--SDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEEecccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeC
Confidence 9999999999999988542 346899999999999999999999 899999999999999987664 8999
Q ss_pred cccCcccccCCceeeecccc---c----cCCCcHHHHHHhhhccCcHHHHh-hHHhhhc--------------CCCCHHH
Q 048535 258 DFGLAKMHHHGQVMSGRRPI---E----EGKRNLVDRMWSLTERSELLSVL-DERLKAK--------------GGYADEV 315 (409)
Q Consensus 258 DFGla~~~~~~~~~~g~~p~---~----~~~~~~~~~vws~~~~~~~~~~~-~~~l~~~--------------~~~~~~~ 315 (409)
|||++..........+..++ + ...++..+|+|+++ ..+++++ ....... .......
T Consensus 155 d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG--~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (262)
T cd05077 155 DPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFG--TTLWEICYNGEIPLKDKTLAEKERFYEGQCMLVTPS 232 (262)
T ss_pred CCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHH--HHHHHHHhCCCCCCCCcchhHHHHHHhcCccCCCCC
Confidence 99998765433222222221 1 23456678999874 2233332 1111100 0111112
Q ss_pred HHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 048535 316 VEKVLHLGLLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 316 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
...+.+++.+||+.||.+||++.++++.|+
T Consensus 233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 233 CKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 456889999999999999999999998763
No 117
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2e-32 Score=264.59 Aligned_cols=218 Identities=19% Similarity=0.241 Sum_probs=167.0
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMEN 193 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~ 193 (409)
+.||+|+||.||++... ++.||+|.++.. .......+..|++++..++||||+++++++.. ....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-HDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc-CCEEEEEEeCCCC
Confidence 46999999999999876 889999999754 23345677899999999999999999998887 6789999999999
Q ss_pred CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---
Q 048535 194 GSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWE-SKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--- 269 (409)
Q Consensus 194 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--- 269 (409)
|+|.+++.. ...+++..+..++.||+.||.||| + .+|+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (325)
T cd05594 80 GELFFHLSR---ERVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 153 (325)
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccc
Confidence 999998843 346899999999999999999999 5 799999999999999999999999999987532211
Q ss_pred -eeeeccccc------cCCCcHHHHHHhhhcc-------------CcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCc
Q 048535 270 -VMSGRRPIE------EGKRNLVDRMWSLTER-------------SELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHP 329 (409)
Q Consensus 270 -~~~g~~p~~------~~~~~~~~~vws~~~~-------------~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~ 329 (409)
...|...+. ...++...|+|+++.. ....+...........++......+.+++.+||+.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~ 233 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKK 233 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhc
Confidence 122332221 2445677899997311 11111111111111223344566789999999999
Q ss_pred CCCCCC-----CHHHHHHH
Q 048535 330 EANSRP-----TIRQVLKM 343 (409)
Q Consensus 330 dP~~RP-----t~~evl~~ 343 (409)
||++|+ ++.++++.
T Consensus 234 dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 234 DPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CHHHhCCCCCCCHHHHhcC
Confidence 999996 89998753
No 118
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3e-32 Score=254.41 Aligned_cols=219 Identities=23% Similarity=0.349 Sum_probs=168.2
Q ss_pred eeecCCceEEEEEEEC----CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCC
Q 048535 120 VIGLGGNGKVYKGQLL----GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENG 194 (409)
Q Consensus 120 ~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~g 194 (409)
.||+|+||.||+|.+. +..||+|.+.... ....+.|.+|+.++++++||||+++++++.. ...++||||+++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~--~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA--EALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC--CCeEEEEEeCCCC
Confidence 3899999999999875 4569999997653 3445679999999999999999999998853 5689999999999
Q ss_pred CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce----
Q 048535 195 SLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV---- 270 (409)
Q Consensus 195 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~---- 270 (409)
+|.+++... ...+++..+.+++.|++.||.||| +++++||||||+|||++.++.+||+|||+++.......
T Consensus 80 ~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 80 PLNKFLSGK--KDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 999998642 346899999999999999999999 89999999999999999999999999999976543220
Q ss_pred ee-ec-----ccc---ccCCCcHHHHHHhhhccCcHHHHhh-HHhh----------------hcCCCCHHHHHHHHHHHH
Q 048535 271 MS-GR-----RPI---EEGKRNLVDRMWSLTERSELLSVLD-ERLK----------------AKGGYADEVVEKVLHLGL 324 (409)
Q Consensus 271 ~~-g~-----~p~---~~~~~~~~~~vws~~~~~~~~~~~~-~~l~----------------~~~~~~~~~~~~l~~l~~ 324 (409)
.+ +. .+. ....++...|+|+++ ..+++++. ...+ .....+.....++.+++.
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 232 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYG--ITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMK 232 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHH--HHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
Confidence 01 11 111 123456678999874 11222221 1100 011233345678899999
Q ss_pred HccCcCCCCCCCHHHHHHHHhcC
Q 048535 325 LCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 325 ~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
+||+.+|++||++.+|.+.|+..
T Consensus 233 ~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 233 DCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHcCCChhhCcCHHHHHHHHhhh
Confidence 99999999999999999998764
No 119
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4.5e-32 Score=266.10 Aligned_cols=146 Identities=26% Similarity=0.300 Sum_probs=131.2
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|+..+.||+|+||+||++... ++.||+|+++.. .......+.+|+.++.+++|+||+++++.+.+ ....|+|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~-~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD-KLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCeEEEE
Confidence 47889999999999999999886 889999999753 22334578889999999999999999999887 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
|||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~ 151 (363)
T cd05628 80 MEFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGL 151 (363)
T ss_pred EcCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCcccc
Confidence 999999999999954 346999999999999999999999 899999999999999999999999999999754
No 120
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.3e-32 Score=260.14 Aligned_cols=227 Identities=25% Similarity=0.350 Sum_probs=173.5
Q ss_pred CCCccceeecCCceEEEEEEEC-------CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
+|+..+.||+|+||.||+|... +..||+|+++... ....+.|.+|+.++++++||||+++++++.. ....+
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-~~~~~ 84 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK-EQPLS 84 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CCceE
Confidence 3666788999999999999874 4679999997553 3345678999999999999999999999987 66789
Q ss_pred EEEEeCCCCCHHHHHhcC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC
Q 048535 186 LIYDYMENGSLDKWIFEC-------------DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM 252 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~ 252 (409)
+++||+++++|.+++... .....+++..+..++.|++.||.||| +.+|+||||||+|||+++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCC
Confidence 999999999999998521 11235889999999999999999999 89999999999999999999
Q ss_pred cEEEecccCcccccCCcee--ee-------cccc---ccCCCcHHHHHHhhhccCcHHHH----------------hhHH
Q 048535 253 NARLGDFGLAKMHHHGQVM--SG-------RRPI---EEGKRNLVDRMWSLTERSELLSV----------------LDER 304 (409)
Q Consensus 253 ~~kl~DFGla~~~~~~~~~--~g-------~~p~---~~~~~~~~~~vws~~~~~~~~~~----------------~~~~ 304 (409)
.+||+|||+++........ .+ ..+. ..+.++...|+|+++ ..++++ .+..
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG--~~l~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYG--VVLWEVFSYGLQPYCGYSNQDVIEMI 239 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHH--HHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999998865432211 11 1111 124456678899873 112221 2211
Q ss_pred hhh-cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 305 LKA-KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 305 l~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
... ....+...+..+.+++..||+.+|.+||+++++++.|+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 240 RNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111 012344566678999999999999999999999999874
No 121
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.5e-32 Score=261.81 Aligned_cols=269 Identities=23% Similarity=0.331 Sum_probs=188.3
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
++|...+.||+|+||.||+|+.. ++.||+|.++... ......+.+|+.++++++||||+++++++.. ++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHT-DKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEee-CCeEEEEEe
Confidence 56888999999999999999886 7889999997542 2233467889999999999999999999987 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++ +|.+++... ...+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 85 ~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 85 YLDK-DLKQYMDDC--GNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CCCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 9985 898888543 345889999999999999999999 8999999999999999999999999999997643221
Q ss_pred e----eeec---cccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 048535 270 V----MSGR---RPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIR 338 (409)
Q Consensus 270 ~----~~g~---~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 338 (409)
. ..+. .+.+ ...++...|+|+++ ..+++++............+.... +....-.+.+...|...
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG--~il~el~tg~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 233 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVG--CIFFEMASGRPLFPGSTVEDELHL---IFRLLGTPTEETWPGIS 233 (309)
T ss_pred cccccccccccccCCHHHhCCCCCCcHHHHHHHH--HHHHHHHhCCCCCCCCChHHHHHH---HHHHhCCCCHHHHhhhc
Confidence 0 1111 1111 13457789999996 445666655443222222222222 22222222222223222
Q ss_pred HHHHHH--hcCcCCC------CCCCCCcchhHHhhhcccCCCCcccccccCCCCCcccccccc
Q 048535 339 QVLKML--EGQTEGT------GLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINKNR 393 (409)
Q Consensus 339 evl~~L--~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~~~ 393 (409)
...... +.....+ .+.-+....+++.+|+..+|.+|+++++++.||||..+....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~ 296 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTRI 296 (309)
T ss_pred chhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhccccc
Confidence 111110 0000000 000112347999999999999999999999999999887554
No 122
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-32 Score=266.30 Aligned_cols=174 Identities=28% Similarity=0.370 Sum_probs=148.7
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCCh---HHHHHHHHHHHHhccCC-CCceeeEeeEEEccCCeE
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSE---HGMREFLAEVSSLGRLK-HRNLVGLRGWCKKEKESL 184 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~ 184 (409)
....|+..+.||+|.||.||+++.+ |+.+|+|.+..... .....+.+|+.+|+++. |||||.+.+.+.+ ....
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~-~~~~ 111 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED-PDSV 111 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc-CCeE
Confidence 4567888899999999999999987 89999999976532 34568899999999997 9999999999998 7789
Q ss_pred EEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC----CcEEEeccc
Q 048535 185 ILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK----MNARLGDFG 260 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~----~~~kl~DFG 260 (409)
++|||+|.||.|.+.+... .+++..+..++.|++.++.||| +.+|+||||||+|+|+... +.+|++|||
T Consensus 112 ~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 9999999999999999654 3999999999999999999999 8999999999999999543 479999999
Q ss_pred CcccccCCc---eeeeccccc------cCCCcHHHHHHhhh
Q 048535 261 LAKMHHHGQ---VMSGRRPIE------EGKRNLVDRMWSLT 292 (409)
Q Consensus 261 la~~~~~~~---~~~g~~p~~------~~~~~~~~~vws~~ 292 (409)
+|.....+. .++|.+.+. ...|+...|+|++.
T Consensus 185 la~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~G 225 (382)
T KOG0032|consen 185 LAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIG 225 (382)
T ss_pred CceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHH
Confidence 999887744 334444332 25678889999985
No 123
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.7e-32 Score=258.16 Aligned_cols=229 Identities=21% Similarity=0.361 Sum_probs=176.1
Q ss_pred hCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCe
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKES 183 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 183 (409)
.++|++.+.||+|+||.||+|... +..||+|.+... .......+.+|+.+++.++||||+++++++.. ...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~ 83 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVST-GQP 83 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC-CCC
Confidence 357888899999999999999875 267999998755 33455678999999999999999999999887 678
Q ss_pred EEEEEEeCCCCCHHHHHhcCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEE
Q 048535 184 LILIYDYMENGSLDKWIFECDE-------SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARL 256 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl 256 (409)
.++||||+++|+|.+++..... ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEE
Confidence 9999999999999999964321 234789999999999999999999 899999999999999999999999
Q ss_pred ecccCcccccCCcee------e---eccccc---cCCCcHHHHHHhhhccCcHHHHh----------------hHHhh-h
Q 048535 257 GDFGLAKMHHHGQVM------S---GRRPIE---EGKRNLVDRMWSLTERSELLSVL----------------DERLK-A 307 (409)
Q Consensus 257 ~DFGla~~~~~~~~~------~---g~~p~~---~~~~~~~~~vws~~~~~~~~~~~----------------~~~l~-~ 307 (409)
+|||+++........ . +..+.+ ....+..+|+|+++ ..+++++ ..... .
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~il~el~t~g~~p~~~~~~~~~~~~~~~~~ 238 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFG--VVLWEMATLAEQPYQGLSNEEVLKFVIDGG 238 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHH--HHHHHhhccCCCCCccCCHHHHHHHHhcCC
Confidence 999999765432210 0 111111 23456668888873 1111211 11110 0
Q ss_pred cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 308 KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 308 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
....+......+.+++.+||+.+|++|||+.++++.|++
T Consensus 239 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 239 HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 112344456789999999999999999999999999863
No 124
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=9e-33 Score=257.85 Aligned_cols=219 Identities=22% Similarity=0.355 Sum_probs=168.9
Q ss_pred ceeecCCceEEEEEEEC---------CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 119 NVIGLGGNGKVYKGQLL---------GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+.||+|+||.||+|... ...||+|.+........+.+.+|+.+++.++||||+++++++.. +...++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-GDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe-CCCcEEEEe
Confidence 46899999999999874 23489999876555566789999999999999999999999987 667899999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCc--------EEEecccC
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMN--------ARLGDFGL 261 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~--------~kl~DFGl 261 (409)
|+++|+|.+++... ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++. +|++|||+
T Consensus 80 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 80 YVKFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred cCCCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEeccccc
Confidence 99999999999653 236899999999999999999999 899999999999999987765 69999999
Q ss_pred cccccCCceeeecccccc-------CCCcHHHHHHhhhccCcHHHHhhH---------------HhhhcCCCCHHHHHHH
Q 048535 262 AKMHHHGQVMSGRRPIEE-------GKRNLVDRMWSLTERSELLSVLDE---------------RLKAKGGYADEVVEKV 319 (409)
Q Consensus 262 a~~~~~~~~~~g~~p~~~-------~~~~~~~~vws~~~~~~~~~~~~~---------------~l~~~~~~~~~~~~~l 319 (409)
+..........+..++.. ..++..+|+|+++ ..+++++.. ........+.....++
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG--~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (258)
T cd05078 155 SITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFG--TTLWEIFSGGDKPLSALDSQKKLQFYEDRHQLPAPKWTEL 232 (258)
T ss_pred ccccCCchhccccCCccCchhccCCCCCCchhhHHHHH--HHHHHHHcCCCCChhhccHHHHHHHHHccccCCCCCcHHH
Confidence 876655444444333211 2346678999873 111221111 0011112222334578
Q ss_pred HHHHHHccCcCCCCCCCHHHHHHHHh
Q 048535 320 LHLGLLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 320 ~~l~~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
.+++.+||+.||++|||++++++.|+
T Consensus 233 ~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 233 ANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHHHhccChhhCCCHHHHHHhcC
Confidence 99999999999999999999999874
No 125
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.7e-32 Score=258.30 Aligned_cols=228 Identities=23% Similarity=0.383 Sum_probs=174.8
Q ss_pred CCCCccceeecCCceEEEEEEEC------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCeE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL------GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KESL 184 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~ 184 (409)
+.|++.+.||+|+||.||++.+. +..||+|.++.. .......+.+|+.++++++||||+++++++... ....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 45788899999999999999742 678999999755 344557899999999999999999999998764 3568
Q ss_pred EEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 185 ILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
++||||+++++|.+++... ...+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCccccc
Confidence 9999999999999999542 235899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCce-------eeecccc------ccCCCcHHHHHHhhhccCcHHHHhhH----------------------------
Q 048535 265 HHHGQV-------MSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDE---------------------------- 303 (409)
Q Consensus 265 ~~~~~~-------~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~---------------------------- 303 (409)
...... ..+...+ ....++...|+|+++. .+++++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~--il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGV--TLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhh--hhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 543221 1111111 1133456688998741 12222110
Q ss_pred -Hhh--hcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 304 -RLK--AKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 304 -~l~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
.+. ...+.+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 237 RVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 000 00111233456899999999999999999999999999864
No 126
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.1e-32 Score=269.34 Aligned_cols=260 Identities=21% Similarity=0.290 Sum_probs=181.3
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC----CeEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK----ESLI 185 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~ 185 (409)
+|+..+.||+|+||.||++... ++.||+|++... .....+.+.+|+++++.++||||+++++++.... ...|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788999999999999999975 899999998643 3344567899999999999999999999987632 2689
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
+||||+. ++|.+++. ....+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIV---SPQPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999997 58888884 3456999999999999999999999 899999999999999999999999999999865
Q ss_pred cCCc--eee---ecc---ccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHH------------
Q 048535 266 HHGQ--VMS---GRR---PIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLH------------ 321 (409)
Q Consensus 266 ~~~~--~~~---g~~---p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~------------ 321 (409)
.... ..+ +.. +.+ ...++...|+|+++ ..+++++..........+.+....+.+
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG--~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 154 EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVG--CIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRS 231 (372)
T ss_pred ccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHH--HHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 4321 111 111 111 12356788999996 345555544433222222222111111
Q ss_pred ---HHHHccCcCCCCCCCHHHHHHHHhcCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCccccc
Q 048535 322 ---LGLLCAHPEANSRPTIRQVLKMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEIN 390 (409)
Q Consensus 322 ---l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~ 390 (409)
-....+...+...|....+... . ........+++.+|+..+|.+|++..+++.||||.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTL-------S-SQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhccc-------C-CCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 1111112223333322221110 0 00112237889999999999999999999999988743
No 127
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.5e-32 Score=255.69 Aligned_cols=229 Identities=24% Similarity=0.373 Sum_probs=176.7
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|+..+.||+|+||.||++... ++.+|||.+... ......++.+|+.+++.++||||+++++++.. ++..+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-DNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe-CCeEEEE
Confidence 46788899999999999999975 899999988643 33445688999999999999999999999887 6789999
Q ss_pred EEeCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 188 YDYMENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
|||+++++|.+++... .....+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 9999999999998642 22356899999999999999999999 8999999999999999999999999999987654
Q ss_pred CCce----eeecc---cc---ccCCCcHHHHHHhhhccCcHHHHhhHHhh-------------------hcCCCCHHHHH
Q 048535 267 HGQV----MSGRR---PI---EEGKRNLVDRMWSLTERSELLSVLDERLK-------------------AKGGYADEVVE 317 (409)
Q Consensus 267 ~~~~----~~g~~---p~---~~~~~~~~~~vws~~~~~~~~~~~~~~l~-------------------~~~~~~~~~~~ 317 (409)
.... ..|.. +. .....+...|+|+++. .+++++....+ ...........
T Consensus 158 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~--il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd08229 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGC--LLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE 235 (267)
T ss_pred cCCcccccccCCcCccCHHHhcCCCccchhhHHHHHH--HHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccH
Confidence 3221 11211 11 1234566789998741 11121111100 00111234566
Q ss_pred HHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 318 KVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 318 ~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
.+.+++.+||+.||++||||.+|++++++.
T Consensus 236 ~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 236 ELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred HHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 899999999999999999999999998764
No 128
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.8e-32 Score=257.17 Aligned_cols=229 Identities=24% Similarity=0.369 Sum_probs=175.2
Q ss_pred HhCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCC
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE 182 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 182 (409)
.+++|+..+.||+|+||.||+|.+. +..||+|.+... .......|.+|+.++++++|+||+++++++.+ ..
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~ 82 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE-RL 82 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CC
Confidence 3467889999999999999999885 367999998754 33445679999999999999999999998887 56
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC---cEE
Q 048535 183 SLILIYDYMENGSLDKWIFECDE----SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM---NAR 255 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~---~~k 255 (409)
..++||||+++|+|.+++..... ...+++..+++++.||+.||+||| +.+++||||||+|||++.++ .+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceE
Confidence 78999999999999999965421 135899999999999999999999 88999999999999998764 599
Q ss_pred EecccCcccccCCcee--e-------ecccc---ccCCCcHHHHHHhhhccCcHHHHh----------------hHHhh-
Q 048535 256 LGDFGLAKMHHHGQVM--S-------GRRPI---EEGKRNLVDRMWSLTERSELLSVL----------------DERLK- 306 (409)
Q Consensus 256 l~DFGla~~~~~~~~~--~-------g~~p~---~~~~~~~~~~vws~~~~~~~~~~~----------------~~~l~- 306 (409)
|+|||+++........ . ...+. ....++...|+|+++. .+++++ +....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~--il~el~~~g~~pf~~~~~~~~~~~~~~~ 237 (277)
T cd05036 160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGV--LLWEIFSLGYMPYPGRTNQEVMEFVTGG 237 (277)
T ss_pred eccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHH--HHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999875332211 0 01111 1245677899998741 122211 11110
Q ss_pred hcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 048535 307 AKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 307 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
.....+...+..+.+++.+||+.+|++|||+.+|++.|+
T Consensus 238 ~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 238 GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 011233344567899999999999999999999999886
No 129
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.4e-32 Score=262.38 Aligned_cols=167 Identities=23% Similarity=0.344 Sum_probs=135.7
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||+|... ++.||+|+++.. .....+.+..|..++..+ +||||+++++++.. .+..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~-~~~~~iv~Ey~~ 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT-PDRLFFVMEFVN 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-CCEEEEEEcCCC
Confidence 46999999999999987 789999999753 233456778899998877 79999999999887 778999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--- 269 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--- 269 (409)
+|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~g~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~ 153 (320)
T cd05590 80 GGDLMFHIQK---SRRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT 153 (320)
T ss_pred CchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcc
Confidence 9999999854 346899999999999999999999 8999999999999999999999999999987532211
Q ss_pred -eeeecccc------ccCCCcHHHHHHhhh
Q 048535 270 -VMSGRRPI------EEGKRNLVDRMWSLT 292 (409)
Q Consensus 270 -~~~g~~p~------~~~~~~~~~~vws~~ 292 (409)
...|...+ ....++...|+|+++
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 183 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMG 183 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhH
Confidence 12222222 123456677888875
No 130
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.9e-32 Score=269.20 Aligned_cols=144 Identities=22% Similarity=0.294 Sum_probs=129.8
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
.|+..+.||+|+||+||+|... ++.||+|++... .......+.+|+.++++++||||+++++++.+ .+..++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~-~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD-KDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec-CCEEEEEE
Confidence 5788999999999999999986 889999999654 23445678999999999999999999999987 77899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
||+++|+|.+++.. ...+++..+..++.||+.||.||| ..+|+||||||+|||++.++++||+|||+++.
T Consensus 81 E~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~ 150 (381)
T cd05626 81 DYIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTG 150 (381)
T ss_pred ecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence 99999999999954 346899999999999999999999 89999999999999999999999999999864
No 131
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-33 Score=233.41 Aligned_cols=261 Identities=23% Similarity=0.311 Sum_probs=197.8
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|+..++||+|.||+||+|+.. ++.||+|+++.++ +.-....++|+.+|+.++|.|||++++.... +..+-+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhs-dkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhcc-CceeEEeHH
Confidence 4666789999999999999887 8899999998663 2234567899999999999999999998877 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
||.. +|.+|.... ++.++.+....++.|+++||.|+| ++++.||||||.|.||+.+|+.|++|||+|+.+....
T Consensus 82 ~cdq-dlkkyfdsl--ng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 82 FCDQ-DLKKYFDSL--NGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred HhhH-HHHHHHHhc--CCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 9977 999998654 356899999999999999999999 8999999999999999999999999999999765432
Q ss_pred ------e-eeeccccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 048535 270 ------V-MSGRRPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIR 338 (409)
Q Consensus 270 ------~-~~g~~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 338 (409)
+ .--.+|.+ ...|+...|+|+.. ..+.++.+..-+.-+ -.+...++..+-...-.+.-++=|+|.
T Consensus 156 rcysaevvtlwyrppdvlfgakly~tsidmwsag--cifaelanagrplfp--g~dvddqlkrif~~lg~p~ed~wps~t 231 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG--CIFAELANAGRPLFP--GNDVDDQLKRIFRLLGTPTEDQWPSMT 231 (292)
T ss_pred EeeeceeeeeeccCcceeeeeehhccchHhhhcc--hHHHHHhhcCCCCCC--CCcHHHHHHHHHHHhCCCccccCCccc
Confidence 1 11122222 24567778999986 445555554332111 123334455555555566777778887
Q ss_pred HHHHHHhcCcCCCCCCC-----------CCcchhHHhhhcccCCCCcccccccCCCCCcccc
Q 048535 339 QVLKMLEGQTEGTGLED-----------EGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEI 389 (409)
Q Consensus 339 evl~~L~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~ 389 (409)
++-. ....|..++ ....+|++++++.-.|..|++.+++++||+|+..
T Consensus 232 ~lpd----yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 232 KLPD----YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred cCCC----CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 6532 222222111 1234899999999999999999999999999864
No 132
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.9e-32 Score=255.74 Aligned_cols=227 Identities=27% Similarity=0.462 Sum_probs=175.2
Q ss_pred CCCCccceeecCCceEEEEEEEC--C---cEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--G---VEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~---~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
++|+..+.||+|+||.||+|... + ..||||.+... ......+|..|+.++++++||||+++++++.+ ....++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-~~~~~l 82 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-SRPVMI 82 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-CCceEE
Confidence 35778899999999999999986 3 36999999765 45556789999999999999999999999876 677899
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
||||+++|+|.+++... ...+++.++..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||+++...
T Consensus 83 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 83 ITEFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EEecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccc
Confidence 99999999999999643 345899999999999999999999 8999999999999999999999999999987654
Q ss_pred CCce-------ee-----ecccc---ccCCCcHHHHHHhhhccCcHHHHh----------------hHHhh-hcCCCCHH
Q 048535 267 HGQV-------MS-----GRRPI---EEGKRNLVDRMWSLTERSELLSVL----------------DERLK-AKGGYADE 314 (409)
Q Consensus 267 ~~~~-------~~-----g~~p~---~~~~~~~~~~vws~~~~~~~~~~~----------------~~~l~-~~~~~~~~ 314 (409)
.... .. ...+. ....++...|+|+++. .+++++ ..... ...+.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~--~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~ 235 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGI--VMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMD 235 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHH--HHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCccc
Confidence 3210 00 01111 1234566788888631 111111 11100 00122334
Q ss_pred HHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 315 VVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 315 ~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
.+..+.+++..||+.+|.+||++.++++.|++.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 236 CPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 456788999999999999999999999998764
No 133
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.5e-32 Score=262.84 Aligned_cols=230 Identities=26% Similarity=0.406 Sum_probs=173.3
Q ss_pred CCCCccceeecCCceEEEEEEEC--Cc--EEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GV--EVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~--~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~l 186 (409)
++|++.+.||+|+||.||+|.+. +. .+|+|.++.. .......+.+|++++.++ +||||+++++++.. .+..++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~-~~~~~l 85 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYL 85 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC-CCCceE
Confidence 57888899999999999999875 43 4688887643 344567889999999999 89999999999887 678999
Q ss_pred EEEeCCCCCHHHHHhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCc
Q 048535 187 IYDYMENGSLDKWIFECD-------------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMN 253 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~ 253 (409)
||||+++|+|.+++.... ....+++.+++.++.|++.||+||| +++|+||||||+|||+++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCc
Confidence 999999999999996432 1235889999999999999999999 899999999999999999999
Q ss_pred EEEecccCcccccCCc---eee---ecccc---ccCCCcHHHHHHhhhccCcHHHHhh----------------HHhhh-
Q 048535 254 ARLGDFGLAKMHHHGQ---VMS---GRRPI---EEGKRNLVDRMWSLTERSELLSVLD----------------ERLKA- 307 (409)
Q Consensus 254 ~kl~DFGla~~~~~~~---~~~---g~~p~---~~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~~- 307 (409)
+||+|||+++...... ... ...+. ....++..+|+|+++ ..+++++. .....
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~il~ellt~g~~p~~~~~~~~~~~~~~~~~ 240 (303)
T cd05088 163 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG--VLLWEIVSLGGTPYCGMTCAELYEKLPQGY 240 (303)
T ss_pred EEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhh--hHHHHHHhcCCCCcccCChHHHHHHHhcCC
Confidence 9999999996432110 000 01111 113345667888874 12222221 11100
Q ss_pred cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCc
Q 048535 308 KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQT 348 (409)
Q Consensus 308 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 348 (409)
....+......+.+++.+||+.+|++||++.++++.|+.+.
T Consensus 241 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 241 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 01122234567899999999999999999999999988654
No 134
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.1e-32 Score=260.88 Aligned_cols=234 Identities=23% Similarity=0.378 Sum_probs=178.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC---------CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEcc
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL---------GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKE 180 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 180 (409)
.++|.+.+.||+|+||.||++... ...+|+|.+... ......++.+|+.++.++ +||||+++++++..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~- 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-
Confidence 357899999999999999999863 246999999754 344566788999999999 89999999999987
Q ss_pred CCeEEEEEEeCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCee
Q 048535 181 KESLILIYDYMENGSLDKWIFECDE-------------SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVL 247 (409)
Q Consensus 181 ~~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 247 (409)
.+..++||||+++|+|.+++..... ...+++.++++++.|++.||+||| +.+++||||||+|||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nil 172 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVL 172 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheE
Confidence 6789999999999999999975321 235899999999999999999999 899999999999999
Q ss_pred eCCCCcEEEecccCcccccCCce----eee-----cccc---ccCCCcHHHHHHhhhcc-------C-------cHHHHh
Q 048535 248 LDKKMNARLGDFGLAKMHHHGQV----MSG-----RRPI---EEGKRNLVDRMWSLTER-------S-------ELLSVL 301 (409)
Q Consensus 248 l~~~~~~kl~DFGla~~~~~~~~----~~g-----~~p~---~~~~~~~~~~vws~~~~-------~-------~~~~~~ 301 (409)
++.++.+||+|||+++....... ..+ ..+. ....++...|+|+++.. + ...++.
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~ 252 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 252 (307)
T ss_pred EcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence 99999999999999976543210 011 1111 12345677899987311 0 111111
Q ss_pred hHHhhh-cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcC
Q 048535 302 DERLKA-KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTE 349 (409)
Q Consensus 302 ~~~l~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 349 (409)
...... ..+.+......+.+++.+||+.+|++|||+.++++.|+.+.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 253 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred HHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 111110 112334456788999999999999999999999999987654
No 135
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.3e-32 Score=258.10 Aligned_cols=229 Identities=23% Similarity=0.384 Sum_probs=175.7
Q ss_pred hCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCe
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKES 183 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 183 (409)
.++|+..+.||+|+||.||++... +..||+|.+... .....+.|.+|+.++++++||||+++++++.. ...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~-~~~ 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAV-GKP 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC-CCc
Confidence 467889999999999999999863 578999999755 34455779999999999999999999999887 667
Q ss_pred EEEEEEeCCCCCHHHHHhcCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCC
Q 048535 184 LILIYDYMENGSLDKWIFECD-------------------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKAS 244 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~ 244 (409)
.+++|||+++|+|.+++.... ....+++..++.++.|++.||+||| +.+++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHh
Confidence 899999999999999996421 1134788999999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccCcccccCCce------eee---cccc---ccCCCcHHHHHHhhhccCcHHHHhh----------
Q 048535 245 NVLLDKKMNARLGDFGLAKMHHHGQV------MSG---RRPI---EEGKRNLVDRMWSLTERSELLSVLD---------- 302 (409)
Q Consensus 245 NILl~~~~~~kl~DFGla~~~~~~~~------~~g---~~p~---~~~~~~~~~~vws~~~~~~~~~~~~---------- 302 (409)
|||+++++.+||+|||+++....... ... ..+. ....++...|+|+++ ..+++++.
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG--~il~el~~~~~~p~~~~~ 237 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYG--VVLWEIFSYGMQPYYGMA 237 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHH--HHHHHHHhCCCCCCCCCC
Confidence 99999999999999999875432210 000 1111 124456778999974 11222211
Q ss_pred ------HHhhh-cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 303 ------ERLKA-KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 303 ------~~l~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
..... ....+...+.++.+++.+||+.+|++|||+.|+++.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 238 HEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 10000 001233445789999999999999999999999999874
No 136
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=5.4e-32 Score=255.77 Aligned_cols=228 Identities=22% Similarity=0.388 Sum_probs=176.0
Q ss_pred CCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
.+|+..++||+|+||.||++... +..+|+|.+..........|.+|+++++.++|+||+++++++.. ....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 83 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTE-GRPLL 83 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEec-CCceE
Confidence 46777899999999999999642 56799999887666667889999999999999999999999887 67789
Q ss_pred EEEEeCCCCCHHHHHhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCc
Q 048535 186 LIYDYMENGSLDKWIFECDE------------SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMN 253 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~ 253 (409)
++|||+++|+|.+++..... ...+++..+..++.|++.||+||| +.+++||||||+|||+++++.
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCC
Confidence 99999999999999965321 134899999999999999999999 899999999999999999999
Q ss_pred EEEecccCcccccCCce--eee-------cccc---ccCCCcHHHHHHhhhccCcHHHHhh----------------HHh
Q 048535 254 ARLGDFGLAKMHHHGQV--MSG-------RRPI---EEGKRNLVDRMWSLTERSELLSVLD----------------ERL 305 (409)
Q Consensus 254 ~kl~DFGla~~~~~~~~--~~g-------~~p~---~~~~~~~~~~vws~~~~~~~~~~~~----------------~~l 305 (409)
+||+|||+++....... ..+ ..+. ....++...|+|+++ ..+++++. ...
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~il~el~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFG--VVLWEIFTYGKQPWYQLSNTEAIECIT 238 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHH--HHHHHHHcCCCCCCccCCHHHHHHHHH
Confidence 99999999975533211 000 1111 124456778999873 11222221 111
Q ss_pred hh-cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 306 KA-KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 306 ~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
.. ....+...+..+.+++.+||+.||.+||++.++++.|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 239 QGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred cCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 10 011223445678999999999999999999999999863
No 137
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=8e-32 Score=260.20 Aligned_cols=215 Identities=19% Similarity=0.251 Sum_probs=157.9
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCC-ceeeEeeEEEccCCeEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHR-NLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~~lv 187 (409)
+|+..+.||+|+||.||+|... ++.||+|++... .....+.+..|.+++..++|+ +|+++++++.. .+..|+|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv 79 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRLYFV 79 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc-CCEEEEE
Confidence 5788899999999999999987 678999999754 234456788999999999765 57888888876 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 80 MEYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred EcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 999999999999853 346899999999999999999999 89999999999999999999999999999875321
Q ss_pred C----ceeeeccccc------cCCCcHHHHHHhhhccCcHHHHhhHHhhh---------------cCCCCHHHHHHHHHH
Q 048535 268 G----QVMSGRRPIE------EGKRNLVDRMWSLTERSELLSVLDERLKA---------------KGGYADEVVEKVLHL 322 (409)
Q Consensus 268 ~----~~~~g~~p~~------~~~~~~~~~vws~~~~~~~~~~~~~~l~~---------------~~~~~~~~~~~l~~l 322 (409)
. ....|...+. ...++...|+|+++ ..+++++...... ...++......+.++
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG--vil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l 231 (324)
T cd05587 154 GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFG--VLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSI 231 (324)
T ss_pred CCCceeeecCCccccChhhhcCCCCCcccchhhhH--HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 1 1122332221 13456678999885 2333333322221 111222333455566
Q ss_pred HHHccCcCCCCCCCH
Q 048535 323 GLLCAHPEANSRPTI 337 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~ 337 (409)
+.+||+.||.+|++.
T Consensus 232 i~~~l~~~P~~R~~~ 246 (324)
T cd05587 232 CKGLLTKHPAKRLGC 246 (324)
T ss_pred HHHHhhcCHHHcCCC
Confidence 666666666666665
No 138
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.5e-32 Score=267.86 Aligned_cols=146 Identities=26% Similarity=0.319 Sum_probs=131.5
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|+..+.||+|+||.||+|... ++.||||++... .......+.+|+.++..++||||+++++++.+ ++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD-ENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-CCeEEEE
Confidence 47889999999999999999986 889999999753 23345668899999999999999999999987 7789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
|||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 151 (364)
T cd05599 80 MEYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGL 151 (364)
T ss_pred ECCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceec
Confidence 999999999999954 346899999999999999999999 899999999999999999999999999998754
No 139
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=5.5e-32 Score=253.22 Aligned_cols=227 Identities=24% Similarity=0.385 Sum_probs=175.6
Q ss_pred hCCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
.++|++.+.||+|+||.||+|.+. ...||+|.++.... ..+.|.+|+.++++++||||+++++++.+ ...++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~lv~e~ 81 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEY 81 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC--CCcEEEEEc
Confidence 356888999999999999999887 56799999975432 33578999999999999999999998753 457899999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV 270 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 270 (409)
+++|+|.+++... ....+++..+..++.|++.||+||| +.+++||||||+||++++++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 82 MSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred CCCCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 9999999999653 2345899999999999999999999 89999999999999999999999999999986543321
Q ss_pred ee-----e---ccccc---cCCCcHHHHHHhhhccCcHHHHhh----------------HHhhh-cCCCCHHHHHHHHHH
Q 048535 271 MS-----G---RRPIE---EGKRNLVDRMWSLTERSELLSVLD----------------ERLKA-KGGYADEVVEKVLHL 322 (409)
Q Consensus 271 ~~-----g---~~p~~---~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~~-~~~~~~~~~~~l~~l 322 (409)
.. + ..+.+ ...++...|+|+++. .+++++. ..... ....+...+..+.++
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~--~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 235 (262)
T cd05071 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI--LLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 235 (262)
T ss_pred ccccCCcccceecCHhHhccCCCCchhhHHHHHH--HHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHH
Confidence 11 1 11111 234567889999741 1222221 11110 012234556788999
Q ss_pred HHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 323 GLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
+.+||+.||++|||+.++++.|+..
T Consensus 236 i~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 236 MCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHHccCCcccCCCHHHHHHHHHHh
Confidence 9999999999999999999999863
No 140
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=5.2e-32 Score=258.94 Aligned_cols=229 Identities=23% Similarity=0.371 Sum_probs=175.8
Q ss_pred hCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCC
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKE 182 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 182 (409)
.++|...+.||+|+||.||++... +..||+|.++.. .....+.+.+|+.+++++ +||||+++++++.. .+
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~ 112 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI-GG 112 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec-CC
Confidence 357889999999999999999752 457999998754 334456799999999999 89999999999887 67
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 183 SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
..+++|||+++|+|.+++.... ...+++.++..++.|++.||.||| +++|+|+||||+|||++.++.+||+|||++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCccc
Confidence 7999999999999999996532 234899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCc--eeee-------cccc---ccCCCcHHHHHHhhhccCcHHHHhh-H---------------Hhhh--cCCCC
Q 048535 263 KMHHHGQ--VMSG-------RRPI---EEGKRNLVDRMWSLTERSELLSVLD-E---------------RLKA--KGGYA 312 (409)
Q Consensus 263 ~~~~~~~--~~~g-------~~p~---~~~~~~~~~~vws~~~~~~~~~~~~-~---------------~l~~--~~~~~ 312 (409)
+...... ...+ ..+. ....++...|+|+++ ..+++++. . .... ....+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG--vil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 266 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG--ILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQP 266 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHH--HHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCC
Confidence 8654321 1111 1111 123456778999973 11222211 0 0000 01122
Q ss_pred HHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 313 DEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 313 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
.....++.+++.+||+.+|++|||+.|+++.|+..
T Consensus 267 ~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 267 EHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 23456789999999999999999999999999763
No 141
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.4e-32 Score=264.87 Aligned_cols=214 Identities=22% Similarity=0.257 Sum_probs=164.4
Q ss_pred ceeecCCceEEEEEEEC-----CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 119 NVIGLGGNGKVYKGQLL-----GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
+.||+|+||.||++... |+.||+|++.... ......+..|++++++++||||+++++++.+ .+..|+||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT-EGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc-CCEEEEEEcCC
Confidence 57999999999998752 7899999997542 2234567889999999999999999999987 67899999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc--
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ-- 269 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-- 269 (409)
++|+|.+++.. ...+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 81 RGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence 99999999953 346899999999999999999999 8999999999999999999999999999998654331
Q ss_pred --eeeecccc---c---cCCCcHHHHHHhhhc-------------cCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccC
Q 048535 270 --VMSGRRPI---E---EGKRNLVDRMWSLTE-------------RSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAH 328 (409)
Q Consensus 270 --~~~g~~p~---~---~~~~~~~~~vws~~~-------------~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~ 328 (409)
...|...+ + ...++...|+|+++. .....+............+......+.+++.+||+
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~ 234 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFK 234 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhh
Confidence 11222211 1 234466789998731 11112222222222223344456678999999999
Q ss_pred cCCCCCCCHHH
Q 048535 329 PEANSRPTIRQ 339 (409)
Q Consensus 329 ~dP~~RPt~~e 339 (409)
.||++||++.+
T Consensus 235 ~~P~~R~~a~~ 245 (318)
T cd05582 235 RNPANRLGAGP 245 (318)
T ss_pred cCHhHcCCCCC
Confidence 99999999655
No 142
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.6e-32 Score=253.14 Aligned_cols=227 Identities=23% Similarity=0.410 Sum_probs=174.2
Q ss_pred CCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
++|++.+.||+|+||.||+|... +..||+|.+..... ..+.|.+|+.++++++|+|++++++++. ....+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~--~~~~~lv~e~~ 82 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS--EEPIYIVTEYM 82 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC--CCCcEEEEEec
Confidence 56888899999999999999887 67899999975432 3467899999999999999999999875 34678999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM 271 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 271 (409)
++++|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||++.........
T Consensus 83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05070 83 SKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence 999999999653 2345899999999999999999999 889999999999999999999999999999765432210
Q ss_pred e--------eccccc---cCCCcHHHHHHhhhcc-------C-------cHHHHhhHHhhh-cCCCCHHHHHHHHHHHHH
Q 048535 272 S--------GRRPIE---EGKRNLVDRMWSLTER-------S-------ELLSVLDERLKA-KGGYADEVVEKVLHLGLL 325 (409)
Q Consensus 272 ~--------g~~p~~---~~~~~~~~~vws~~~~-------~-------~~~~~~~~~l~~-~~~~~~~~~~~l~~l~~~ 325 (409)
. +..+.+ ....+...|+|+++.. + ...+..+..... ..+.+......+.+++.+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQ 238 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 0 011111 1345567889987311 1 111111111110 122334456688999999
Q ss_pred ccCcCCCCCCCHHHHHHHHhc
Q 048535 326 CAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 326 Cl~~dP~~RPt~~evl~~L~~ 346 (409)
||+.+|++|||+.++.+.|++
T Consensus 239 ~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 239 CWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HcccCcccCcCHHHHHHHHhc
Confidence 999999999999999999875
No 143
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.3e-32 Score=253.59 Aligned_cols=224 Identities=24% Similarity=0.329 Sum_probs=172.8
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
.++|++.+.||+|+||.||+|+.. ++.||+|++..........+.+|+.++++++||||+++++++.. .+..++|||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~-~~~~~iv~e 86 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLS-REKLWICME 86 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEe-CCEEEEEEe
Confidence 357899999999999999999985 88999999976554555678899999999999999999999987 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||+++......
T Consensus 87 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 87 YCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 9999999999853 346899999999999999999999 8999999999999999999999999999998653221
Q ss_pred ----eeeecc---ccc------cCCCcHHHHHHhhhccCcHHHHhhHHhhh-----------------cC---CCCHHHH
Q 048535 270 ----VMSGRR---PIE------EGKRNLVDRMWSLTERSELLSVLDERLKA-----------------KG---GYADEVV 316 (409)
Q Consensus 270 ----~~~g~~---p~~------~~~~~~~~~vws~~~~~~~~~~~~~~l~~-----------------~~---~~~~~~~ 316 (409)
...|.. +.+ ....+...|+|+++. .+++++...... .. .......
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~--il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGI--TAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWS 238 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHH--HHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccC
Confidence 111111 111 122456789999741 122221111000 00 0012245
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVLKML 344 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L 344 (409)
..+.+++.+||+.+|++|||++++++.|
T Consensus 239 ~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 239 STFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 6789999999999999999999998743
No 144
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=4.2e-32 Score=257.32 Aligned_cols=215 Identities=22% Similarity=0.332 Sum_probs=161.7
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
+|+..+.||+|+||.||++... ++.||+|.+.... ......+.+|+.++++++||||+++++.+.. ++..++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-KDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC-CCeEEEEE
Confidence 4778899999999999999986 8899999996542 2233567889999999999999999999887 67899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
||+++|+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+|||+++.....
T Consensus 80 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 80 TLMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred eccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 999999999988643 2346899999999999999999999 899999999999999999999999999999875433
Q ss_pred cee---eecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhh-------------------cCCCCHHHHHHHH
Q 048535 269 QVM---SGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKA-------------------KGGYADEVVEKVL 320 (409)
Q Consensus 269 ~~~---~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~-------------------~~~~~~~~~~~l~ 320 (409)
... .|...+ ....++...|+|+++ ..+++++...... ...++......+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G--~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd05605 156 ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLG--CLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAAR 233 (285)
T ss_pred CccccccCCCCccCcHHhcCCCCCccccchhHH--HHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHH
Confidence 211 121111 123455677889873 1222222221111 1122333455667
Q ss_pred HHHHHccCcCCCCCC
Q 048535 321 HLGLLCAHPEANSRP 335 (409)
Q Consensus 321 ~l~~~Cl~~dP~~RP 335 (409)
+++..||+.||++||
T Consensus 234 ~li~~~l~~~P~~R~ 248 (285)
T cd05605 234 SICRQLLTKDPGFRL 248 (285)
T ss_pred HHHHHHccCCHHHhc
Confidence 777777777777777
No 145
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.7e-32 Score=252.09 Aligned_cols=220 Identities=28% Similarity=0.432 Sum_probs=169.7
Q ss_pred ceeecCCceEEEEEEEC--C---cEEEEEEeccCCh-HHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--G---VEVALKRISLDSE-HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~---~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
++||+|+||.||+|.+. + ..+|+|.+..... ...+++.+|+.++++++||||+++++++.. ...++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG--EPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC--CceEEEEEeCC
Confidence 46999999999999875 2 6799999976533 355679999999999999999999998763 46799999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce-e
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV-M 271 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-~ 271 (409)
+|+|.+++... ..+++..+..++.|++.||+||| ..+++|+||||+|||++.++.+||+|||+++....... .
T Consensus 79 ~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 79 LGPLLKYLKKR---REIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 99999999542 36899999999999999999999 88999999999999999999999999999986543221 0
Q ss_pred ----ee-----cccc---ccCCCcHHHHHHhhhccCcHHHHhh-HHhhh----------------cCCCCHHHHHHHHHH
Q 048535 272 ----SG-----RRPI---EEGKRNLVDRMWSLTERSELLSVLD-ERLKA----------------KGGYADEVVEKVLHL 322 (409)
Q Consensus 272 ----~g-----~~p~---~~~~~~~~~~vws~~~~~~~~~~~~-~~l~~----------------~~~~~~~~~~~l~~l 322 (409)
.+ ..+. ....++..+|+|+++ ..+++++. ..... ....+...+..+.++
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 230 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYG--VTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSI 230 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHH--HHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHH
Confidence 11 1111 123456678899874 12222221 11100 012233445678999
Q ss_pred HHHccCcCCCCCCCHHHHHHHHhcCc
Q 048535 323 GLLCAHPEANSRPTIRQVLKMLEGQT 348 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~~L~~~~ 348 (409)
+.+||+.+|++||++.++++.|++..
T Consensus 231 i~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 231 MLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 99999999999999999999998754
No 146
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=8.6e-32 Score=249.55 Aligned_cols=219 Identities=23% Similarity=0.403 Sum_probs=169.6
Q ss_pred ceeecCCceEEEEEEEC-CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCCH
Q 048535 119 NVIGLGGNGKVYKGQLL-GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGSL 196 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gsL 196 (409)
+.||+|+||.||+|... +..+|+|.+.... ......|.+|++++++++||||+++++++.. ....++||||+++|+|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ-RQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec-CCccEEEEECCCCCcH
Confidence 36899999999999876 7889999987653 3344578999999999999999999999987 6688999999999999
Q ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee-----
Q 048535 197 DKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM----- 271 (409)
Q Consensus 197 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~----- 271 (409)
.+++... ...+++..+..++.|++.||.||| +++++||||||+||+++.++.+||+|||++.........
T Consensus 80 ~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (250)
T cd05085 80 LSFLRKK--KDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154 (250)
T ss_pred HHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCC
Confidence 9998643 345899999999999999999999 899999999999999999999999999999754332110
Q ss_pred e---ecccc---ccCCCcHHHHHHhhhccCcHHHHhh---------------HHhh-h-cCCCCHHHHHHHHHHHHHccC
Q 048535 272 S---GRRPI---EEGKRNLVDRMWSLTERSELLSVLD---------------ERLK-A-KGGYADEVVEKVLHLGLLCAH 328 (409)
Q Consensus 272 ~---g~~p~---~~~~~~~~~~vws~~~~~~~~~~~~---------------~~l~-~-~~~~~~~~~~~l~~l~~~Cl~ 328 (409)
. +..+. ....++...|+|+++. .+++++. .... . ....+...+..+.+++.+||+
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~--ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 232 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGI--LLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWD 232 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHH--HHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcc
Confidence 0 01111 1244566789998741 1111111 0110 0 112233456789999999999
Q ss_pred cCCCCCCCHHHHHHHHh
Q 048535 329 PEANSRPTIRQVLKMLE 345 (409)
Q Consensus 329 ~dP~~RPt~~evl~~L~ 345 (409)
.+|++||++.++++.|.
T Consensus 233 ~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 233 YKPENRPKFSELQKELA 249 (250)
T ss_pred cCcccCCCHHHHHHHhc
Confidence 99999999999999875
No 147
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.1e-31 Score=250.75 Aligned_cols=225 Identities=24% Similarity=0.417 Sum_probs=173.9
Q ss_pred CCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
++|.+.+.||+|+||.||+|.+. +..+|+|.+.... ...+.+.+|+.++++++|+|++++++++.. ...+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~v~e~~ 82 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE--EPIYIVTEFM 82 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC--CCcEEEEEcC
Confidence 45788899999999999999987 5679999986543 234678899999999999999999998753 4678999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM 271 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 271 (409)
++|+|.+++... ....+++..+..++.|++.||.||| +.+++|+||||+||++++++.+||+|||+++........
T Consensus 83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05069 83 GKGSLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence 999999999653 2345899999999999999999999 899999999999999999999999999999865433211
Q ss_pred e--------eccccc---cCCCcHHHHHHhhhccCcHHHHhh-HH---------------hhh-cCCCCHHHHHHHHHHH
Q 048535 272 S--------GRRPIE---EGKRNLVDRMWSLTERSELLSVLD-ER---------------LKA-KGGYADEVVEKVLHLG 323 (409)
Q Consensus 272 ~--------g~~p~~---~~~~~~~~~vws~~~~~~~~~~~~-~~---------------l~~-~~~~~~~~~~~l~~l~ 323 (409)
. +..+.+ ....+...|+|+++. .+++++. .. ... ....+...+..+.+++
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~--~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 236 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI--LLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELM 236 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHH--HHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHH
Confidence 0 011111 234567789999741 1222221 11 100 1122344567899999
Q ss_pred HHccCcCCCCCCCHHHHHHHHhc
Q 048535 324 LLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 324 ~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
.+||+.||++||+++++++.|++
T Consensus 237 ~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 237 KLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHccCCcccCcCHHHHHHHHhc
Confidence 99999999999999999999975
No 148
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=5.3e-32 Score=261.46 Aligned_cols=218 Identities=22% Similarity=0.286 Sum_probs=164.0
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHh---ccCCCCceeeEeeEEEccCCeEEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSL---GRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l---~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
|++.+.||+|+||.||+|... ++.||||.++.. .....+.+.+|+.++ ++++||||+++++++.. .+..|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT-EDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-CCEEEE
Confidence 567889999999999999986 889999999754 223345566676554 67789999999999887 778999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
||||+++|+|..++.. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 80 v~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 80 VMEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EEcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 9999999999988842 46999999999999999999999 8999999999999999999999999999987532
Q ss_pred CCc----eeeecccc------ccCCCcHHHHHHhhhccCcHHHH---------------hhHHhhhcCCCCHHHHHHHHH
Q 048535 267 HGQ----VMSGRRPI------EEGKRNLVDRMWSLTERSELLSV---------------LDERLKAKGGYADEVVEKVLH 321 (409)
Q Consensus 267 ~~~----~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~---------------~~~~l~~~~~~~~~~~~~l~~ 321 (409)
... ...|...+ ....++...|+|+++ ..++++ .+........++......+.+
T Consensus 153 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG--~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 230 (324)
T cd05589 153 GFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLG--VLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAIS 230 (324)
T ss_pred CCCCcccccccCccccCHhHhcCCCCCcccchhhHH--HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 211 12222221 123456678899874 122222 222222122233445667889
Q ss_pred HHHHccCcCCCCCCC-----HHHHHH
Q 048535 322 LGLLCAHPEANSRPT-----IRQVLK 342 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt-----~~evl~ 342 (409)
++.+||+.||.+||+ +.++++
T Consensus 231 li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 231 IMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred HHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 999999999999994 555544
No 149
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.9e-32 Score=262.47 Aligned_cols=214 Identities=22% Similarity=0.267 Sum_probs=161.3
Q ss_pred CCCccceeecCCceEEEEEEEC-----CcEEEEEEeccC----ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCe
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL-----GVEVALKRISLD----SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKES 183 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~----~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 183 (409)
+|++.+.||+|+||.||+++.. ++.||+|++... .....+.+..|+.++.++ +||||+++++++.. .+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~ 79 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT-EAK 79 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec-CCE
Confidence 4788899999999999998763 788999999643 223345688999999999 59999999998876 678
Q ss_pred EEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcc
Q 048535 184 LILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAK 263 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 263 (409)
.++||||+++|+|.+++.. ...+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 80 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 80 LHLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 9999999999999999954 346899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCc-----eeeeccccc-------cCCCcHHHHHHhhhccCcHHHHhhHH-------------------hhhcCCCC
Q 048535 264 MHHHGQ-----VMSGRRPIE-------EGKRNLVDRMWSLTERSELLSVLDER-------------------LKAKGGYA 312 (409)
Q Consensus 264 ~~~~~~-----~~~g~~p~~-------~~~~~~~~~vws~~~~~~~~~~~~~~-------------------l~~~~~~~ 312 (409)
...... ...|...+. ...++...|+|+++ ..+++++... .......+
T Consensus 154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG--~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 231 (332)
T cd05614 154 EFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLG--ILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFP 231 (332)
T ss_pred cccccCCCccccccCCccccCHHHhcCCCCCCCccccccch--hhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 643221 122322221 12245678899874 1222222211 11112233
Q ss_pred HHHHHHHHHHHHHccCcCCCCCCC
Q 048535 313 DEVVEKVLHLGLLCAHPEANSRPT 336 (409)
Q Consensus 313 ~~~~~~l~~l~~~Cl~~dP~~RPt 336 (409)
......+.+++.+||+.||++||+
T Consensus 232 ~~~~~~~~~li~~~l~~dp~~R~~ 255 (332)
T cd05614 232 SFIGPEAQDLLHKLLRKDPKKRLG 255 (332)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCC
Confidence 344556778888888888888883
No 150
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.3e-32 Score=274.42 Aligned_cols=231 Identities=21% Similarity=0.281 Sum_probs=177.5
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCC---
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE--- 182 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--- 182 (409)
...++|.+.+.||+|+||+||+|... ++.||||++... +......+.+|+.++..++|+||+++++.+.....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 44578999999999999999999875 899999999654 44556778999999999999999999887653211
Q ss_pred ----eEEEEEEeCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEe
Q 048535 183 ----SLILIYDYMENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLG 257 (409)
Q Consensus 183 ----~~~lv~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~ 257 (409)
.+++||||+++|+|.+++... .....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEE
Confidence 368999999999999998643 22356899999999999999999999 8999999999999999999999999
Q ss_pred cccCcccccCC------ceeeecccc------ccCCCcHHHHHHhhhc-------------cCcHHHHhhHHhhh-cCCC
Q 048535 258 DFGLAKMHHHG------QVMSGRRPI------EEGKRNLVDRMWSLTE-------------RSELLSVLDERLKA-KGGY 311 (409)
Q Consensus 258 DFGla~~~~~~------~~~~g~~p~------~~~~~~~~~~vws~~~-------------~~~~~~~~~~~l~~-~~~~ 311 (409)
|||+++..... ....|...+ ....++...|+|+++. .....+++...+.. ....
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~ 265 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPL 265 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 99999865432 112232222 1245678899999841 11122222222211 1123
Q ss_pred CHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 048535 312 ADEVVEKVLHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 312 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
+......+.+++..||+.||.+||++.++++.
T Consensus 266 ~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 266 PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 44556789999999999999999999999863
No 151
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.1e-31 Score=257.49 Aligned_cols=266 Identities=19% Similarity=0.243 Sum_probs=183.1
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
++|++.+.||+|+||.||++... +..+|+|.+... ......++.+|++++.+++||||+++++++.. ++..++|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYS-DGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCEEEEEee
Confidence 46889999999999999999986 788999998755 33445678999999999999999999999987 778999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|.+++.. ...+++..+..++.|+++||.|||+ ..+++||||||+|||++.++.+||+|||++.......
T Consensus 80 y~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (308)
T cd06615 80 HMDGGSLDQVLKK---AGRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 154 (308)
T ss_pred ccCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccccccc
Confidence 9999999999954 2468999999999999999999993 2589999999999999999999999999987653321
Q ss_pred --eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCc------------
Q 048535 270 --VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHP------------ 329 (409)
Q Consensus 270 --~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~------------ 329 (409)
...|...+ ....++...|+|+++ ..+++++...... .......+..+.....+.
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG--~~l~~l~~g~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (308)
T cd06615 155 ANSFVGTRSYMSPERLQGTHYTVQSDIWSLG--LSLVEMAIGRYPI----PPPDAKELEAMFGRPVSEGEAKESHRPVSG 228 (308)
T ss_pred cccCCCCcCccChhHhcCCCCCccchHHHHH--HHHHHHHhCCCCC----CCcchhhHHHhhcCccccccccCCcccccC
Confidence 11122111 123355678999985 3345554433321 111111222222111110
Q ss_pred CCCCCCC---HHHHHHHHhcCcC--CCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCccccc
Q 048535 330 EANSRPT---IRQVLKMLEGQTE--GTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEIN 390 (409)
Q Consensus 330 dP~~RPt---~~evl~~L~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~ 390 (409)
.+...+. ..++.+.+.+... .+...-...-.+++.+|+..+|.+|.+..+++.||||....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 294 (308)
T cd06615 229 HPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAE 294 (308)
T ss_pred CCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcc
Confidence 1111111 1222332222111 11111123457888888888888888888888888886543
No 152
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.7e-32 Score=262.30 Aligned_cols=233 Identities=22% Similarity=0.379 Sum_probs=178.1
Q ss_pred CCCCccceeecCCceEEEEEEEC---------CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccC
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL---------GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEK 181 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 181 (409)
.+|++.+.||+|+||.||++... +..||+|.++.. .....+++.+|+.+++++ +||||++++++|.. .
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~ 90 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-D 90 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc-C
Confidence 46888999999999999999753 236899998754 344567899999999999 89999999999987 6
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeee
Q 048535 182 ESLILIYDYMENGSLDKWIFECD-------------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLL 248 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl 248 (409)
+..+++|||+++|+|.+++.... ....+++.+++.++.|++.||.||| +++|+||||||+|||+
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEE
Confidence 68899999999999999996532 1235889999999999999999999 8999999999999999
Q ss_pred CCCCcEEEecccCcccccCCce----eee-----cccc---ccCCCcHHHHHHhhhccCcHHHHh---------------
Q 048535 249 DKKMNARLGDFGLAKMHHHGQV----MSG-----RRPI---EEGKRNLVDRMWSLTERSELLSVL--------------- 301 (409)
Q Consensus 249 ~~~~~~kl~DFGla~~~~~~~~----~~g-----~~p~---~~~~~~~~~~vws~~~~~~~~~~~--------------- 301 (409)
+.++.+||+|||+++....... ..+ ..+. ....++..+|+|+++. .+++++
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~--il~el~~~g~~p~~~~~~~~~ 245 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV--LLWEIFTLGGSPYPGIPVEEL 245 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHH--HHHHHHhcCCCCCCCCCHHHH
Confidence 9999999999999986543210 111 1111 1234566789998731 111211
Q ss_pred -hHHhh-hcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCCC
Q 048535 302 -DERLK-AKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEGT 351 (409)
Q Consensus 302 -~~~l~-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~ 351 (409)
..... ...+.+......+.+++.+||+.+|++|||+.|+++.|+.+....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 246 FKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 11111 011223344567899999999999999999999999999876544
No 153
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=9e-32 Score=252.79 Aligned_cols=224 Identities=27% Similarity=0.433 Sum_probs=168.7
Q ss_pred ceeecCCceEEEEEEEC--C--cEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--G--VEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~--~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||+|.+. + ..+|+|.++.. .....+.+.+|++++.++ +||||+++++++.. .+..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-CCCceEEEEeCC
Confidence 36899999999999986 3 35799988753 344557899999999999 89999999999987 667899999999
Q ss_pred CCCHHHHHhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecc
Q 048535 193 NGSLDKWIFECD-------------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDF 259 (409)
Q Consensus 193 ~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DF 259 (409)
+|+|.+++.... ....+++.++..++.|++.||+||| +.+++||||||+|||+++++.+||+||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCC
Confidence 999999996532 1234889999999999999999999 899999999999999999999999999
Q ss_pred cCcccccCCc-eeee-----ccccc---cCCCcHHHHHHhhhccCcHHHHh----------------hHHhhh-cCCCCH
Q 048535 260 GLAKMHHHGQ-VMSG-----RRPIE---EGKRNLVDRMWSLTERSELLSVL----------------DERLKA-KGGYAD 313 (409)
Q Consensus 260 Gla~~~~~~~-~~~g-----~~p~~---~~~~~~~~~vws~~~~~~~~~~~----------------~~~l~~-~~~~~~ 313 (409)
|+++...... -..+ ..+.+ ...++...|+|+++ ..+++++ ...... ..+.+.
T Consensus 157 gl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG--~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 234 (270)
T cd05047 157 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG--VLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPL 234 (270)
T ss_pred CCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHH--HHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCC
Confidence 9986332110 0001 11111 23456678999874 1122221 111100 011223
Q ss_pred HHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCc
Q 048535 314 EVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQT 348 (409)
Q Consensus 314 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 348 (409)
.....+.+++.+||+.||.+|||+.++++.|+++.
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 235 NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 34567899999999999999999999999998653
No 154
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=8.7e-32 Score=252.54 Aligned_cols=220 Identities=21% Similarity=0.354 Sum_probs=162.7
Q ss_pred ceeecCCceEEEEEEEC----CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCC
Q 048535 119 NVIGLGGNGKVYKGQLL----GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMEN 193 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~ 193 (409)
++||+|+||.||+|... ...+|+|.+... .......|.+|+.+++.++||||+++++++.. ....++||||+++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~-~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE-SIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECC-CCceEEEEEeCCC
Confidence 36899999999999764 357899988654 33445678999999999999999999999987 6789999999999
Q ss_pred CCHHHHHhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee
Q 048535 194 GSLDKWIFECDE--SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM 271 (409)
Q Consensus 194 gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 271 (409)
|+|.+++..... ....++.....++.|++.||+||| +.+|+||||||+|||+++++++||+|||+++........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 156 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY 156 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchhe
Confidence 999999975432 233568888999999999999999 899999999999999999999999999998754322110
Q ss_pred ------ee---ccccc----------cCCCcHHHHHHhhhccCcHHHHhh----------------HHhhh------cCC
Q 048535 272 ------SG---RRPIE----------EGKRNLVDRMWSLTERSELLSVLD----------------ERLKA------KGG 310 (409)
Q Consensus 272 ------~g---~~p~~----------~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~~------~~~ 310 (409)
.+ ..+.+ ....+...|+|+++ ..+++++. ..... .+.
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG--~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05042 157 ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLG--VTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQ 234 (269)
T ss_pred eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHH--HHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCc
Confidence 00 11111 12346678999873 11111111 11100 011
Q ss_pred CCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 048535 311 YADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 311 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
.+......+.+++..|| .||++|||+++|++.|.
T Consensus 235 ~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 235 LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 22234566778889999 59999999999999873
No 155
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.5e-32 Score=269.80 Aligned_cols=266 Identities=21% Similarity=0.283 Sum_probs=191.9
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCC-C-----CceeeEeeEEEccCCeEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLK-H-----RNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~g~~~~~~~~~~ 185 (409)
+|.+.+.||+|.||.|.+|.+. ++.||||+++.. .....+-..|+.+|..|+ | -|+|+++++|.. .+++|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f-r~Hlc 264 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF-RNHLC 264 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc-cccee
Confidence 6788999999999999999987 899999999865 334566778999999996 4 379999999998 88999
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC--cEEEecccCcc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM--NARLGDFGLAK 263 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~--~~kl~DFGla~ 263 (409)
||+|.+.. +|+++|+.+. -..++...+..++.||+.||.+|| +.+|||+||||+||||.+-. .+||+|||.|+
T Consensus 265 iVfELL~~-NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 265 IVFELLST-NLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred eeehhhhh-hHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccccc
Confidence 99999977 9999998753 346999999999999999999999 89999999999999997644 59999999998
Q ss_pred cccCCce--eeec-----cccccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHH-------------
Q 048535 264 MHHHGQV--MSGR-----RPIEEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLG------------- 323 (409)
Q Consensus 264 ~~~~~~~--~~g~-----~p~~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~------------- 323 (409)
.....-. +..+ .-+-...|+...|+||++ +.+.++..+.....++...+....+.++.
T Consensus 340 ~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLG--CIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~ 417 (586)
T KOG0667|consen 340 FESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLG--CILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKK 417 (586)
T ss_pred ccCCcceeeeeccccccchhhccCCCCCccceeehh--hhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence 8665431 1111 112236778889999996 55555555544433433333333332221
Q ss_pred ------------HHccCcCCCCCCCHHHHHHHHhcCcC---CC-CC---------CCCCcchhHHhhhcccCCCCccccc
Q 048535 324 ------------LLCAHPEANSRPTIRQVLKMLEGQTE---GT-GL---------EDEGMNVHLLKRIGTRAMTSSWKFA 378 (409)
Q Consensus 324 ------------~~Cl~~dP~~RPt~~evl~~L~~~~~---~~-~~---------~~~~~~~~~l~~~~~~~~~~~~~~~ 378 (409)
..|...+-.+-+...++.+.+..... .| .. .++....|++.+|+..||..||+..
T Consensus 418 ~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~ 497 (586)
T KOG0667|consen 418 AHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPA 497 (586)
T ss_pred cceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHH
Confidence 11333221111122233333322211 11 10 1112237999999999999999999
Q ss_pred ccCCCCCccc
Q 048535 379 GSRGHPTFNE 388 (409)
Q Consensus 379 ~~~~hp~~~~ 388 (409)
++++|||++.
T Consensus 498 qal~Hpfl~~ 507 (586)
T KOG0667|consen 498 QALNHPFLTG 507 (586)
T ss_pred HHhcCccccc
Confidence 9999999994
No 156
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5e-32 Score=260.36 Aligned_cols=233 Identities=23% Similarity=0.404 Sum_probs=177.6
Q ss_pred HhCCCCccceeecCCceEEEEEEEC---------CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEc
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL---------GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKK 179 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 179 (409)
...+|.+.+.||+|+||.||+++.. ...+|+|.++.. .......+.+|+.+++++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 3467888999999999999999752 356999998754 344567789999999999 69999999999987
Q ss_pred cCCeEEEEEEeCCCCCHHHHHhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCe
Q 048535 180 EKESLILIYDYMENGSLDKWIFECD-------------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNV 246 (409)
Q Consensus 180 ~~~~~~lv~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NI 246 (409)
....+++|||+++|+|.+++.... ....+++.++.+++.|++.||.||| +.+|+||||||+||
T Consensus 90 -~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Ni 165 (314)
T cd05099 90 -EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNV 165 (314)
T ss_pred -CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeE
Confidence 677899999999999999996532 1235899999999999999999999 89999999999999
Q ss_pred eeCCCCcEEEecccCcccccCCc----eeeecc-----cc---ccCCCcHHHHHHhhhccCcHHHHhh------------
Q 048535 247 LLDKKMNARLGDFGLAKMHHHGQ----VMSGRR-----PI---EEGKRNLVDRMWSLTERSELLSVLD------------ 302 (409)
Q Consensus 247 Ll~~~~~~kl~DFGla~~~~~~~----~~~g~~-----p~---~~~~~~~~~~vws~~~~~~~~~~~~------------ 302 (409)
|++.++.+||+|||+++...... ...+.. +. ....++..+|+|+++. .+++++.
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~--~l~el~~~g~~p~~~~~~~ 243 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGI--LMWEIFTLGGSPYPGIPVE 243 (314)
T ss_pred EEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHH--HHHHHHhCCCCCCCCCCHH
Confidence 99999999999999998654321 111111 11 1244566788888741 1111111
Q ss_pred ---HHhhh--cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcC
Q 048535 303 ---ERLKA--KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTE 349 (409)
Q Consensus 303 ---~~l~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 349 (409)
..+.. ....+......+.+++.+||+.+|++|||+.++++.|++...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 244 ELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 11110 012233445678899999999999999999999999987653
No 157
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=6.3e-32 Score=251.33 Aligned_cols=224 Identities=28% Similarity=0.397 Sum_probs=173.2
Q ss_pred CCCCccceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
++|++.+.||+|+||.||+|...++.||+|.++... ....+.+|+.++++++|||++++++++.. +..+++|||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH--NGLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC--CCcEEEEECCC
Confidence 458888999999999999999889999999986543 34678999999999999999999998865 34789999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee-
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM- 271 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~- 271 (409)
+|+|.+++... ....+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++........
T Consensus 82 ~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (254)
T cd05083 82 KGNLVNFLRTR-GRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNS 157 (254)
T ss_pred CCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCC
Confidence 99999999653 2345899999999999999999999 899999999999999999999999999999764332100
Q ss_pred ---eecccc---ccCCCcHHHHHHhhhccCcHHHHh----------------hHHhhh-cCCCCHHHHHHHHHHHHHccC
Q 048535 272 ---SGRRPI---EEGKRNLVDRMWSLTERSELLSVL----------------DERLKA-KGGYADEVVEKVLHLGLLCAH 328 (409)
Q Consensus 272 ---~g~~p~---~~~~~~~~~~vws~~~~~~~~~~~----------------~~~l~~-~~~~~~~~~~~l~~l~~~Cl~ 328 (409)
....+. ....++...|+|+++ ..+++++ ...... ....+...+..+.+++.+||+
T Consensus 158 ~~~~~y~~pe~~~~~~~~~~~Dv~slG--~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 235 (254)
T cd05083 158 KLPVKWTAPEALKHKKFSSKSDVWSYG--VLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWE 235 (254)
T ss_pred CCCceecCHHHhccCCcCchhhHHHHH--HHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcC
Confidence 011111 124456678888873 1112211 111000 011233445678899999999
Q ss_pred cCCCCCCCHHHHHHHHhc
Q 048535 329 PEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 329 ~dP~~RPt~~evl~~L~~ 346 (409)
.+|++||+++++++.|++
T Consensus 236 ~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 236 TEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CChhhCcCHHHHHHHHcc
Confidence 999999999999999875
No 158
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=8e-32 Score=254.21 Aligned_cols=228 Identities=25% Similarity=0.385 Sum_probs=174.4
Q ss_pred CCCCccceeecCCceEEEEEEEC------CcEEEEEEeccCCh-HHHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCeE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL------GVEVALKRISLDSE-HGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KESL 184 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~ 184 (409)
..|+..+.||+|+||.||+|.+. +..||||.++.... ...+.|.+|+++++.++||||+++++++... ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45677799999999999999864 67899999976543 2567899999999999999999999988652 3468
Q ss_pred EEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 185 ILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
+++|||+++|+|.+++... ...+++..+..++.|++.||+||| +.+++|+||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred EEEEecCCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 9999999999999999653 235999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCce-eee---------cccc---ccCCCcHHHHHHhhhccCcHHHHh-----------------------------h
Q 048535 265 HHHGQV-MSG---------RRPI---EEGKRNLVDRMWSLTERSELLSVL-----------------------------D 302 (409)
Q Consensus 265 ~~~~~~-~~g---------~~p~---~~~~~~~~~~vws~~~~~~~~~~~-----------------------------~ 302 (409)
...... ... ..+. .....+...|+|+++. .+++++ .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~--~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGV--TLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhh--hhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 653210 000 0111 1234556788998731 111111 1
Q ss_pred HHhhhc--CCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 303 ERLKAK--GGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 303 ~~l~~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
..+... ...+..+..++.+++.+||+.+|++|||+.|++++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 237 ELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 111100 111233446789999999999999999999999999875
No 159
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5e-32 Score=267.11 Aligned_cols=145 Identities=25% Similarity=0.304 Sum_probs=130.2
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|+..+.||+|+||.||++... ++.||||++... .....+.+.+|++++++++||||+++++++.+ ....|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD-AQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc-CCeeEEE
Confidence 47888999999999999999886 889999998643 23345678899999999999999999999987 7789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
|||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 80 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~ 150 (377)
T cd05629 80 MEFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTG 150 (377)
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccc
Confidence 999999999999954 346899999999999999999999 89999999999999999999999999999963
No 160
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.7e-31 Score=250.49 Aligned_cols=229 Identities=22% Similarity=0.330 Sum_probs=173.4
Q ss_pred HHHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 108 IHAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 108 l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
+..+++++.....||+|+||.||+|.+. +..||+|.+........+.+.+|+.++++++|+||+++++++.. ++..+
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~ 81 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSE-NGFFK 81 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeecc-CCEEE
Confidence 3455677777789999999999999876 78899999987766667789999999999999999999999887 67899
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC-CCcEEEecccCccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK-KMNARLGDFGLAKM 264 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~-~~~~kl~DFGla~~ 264 (409)
+++||+++++|.+++.........++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++..
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 99999999999999964322212288889999999999999999 899999999999999976 67899999999876
Q ss_pred ccCCc----eeeecc---ccc---c--CCCcHHHHHHhhhccCcHHHHhhHH------------------hhhcCCCCHH
Q 048535 265 HHHGQ----VMSGRR---PIE---E--GKRNLVDRMWSLTERSELLSVLDER------------------LKAKGGYADE 314 (409)
Q Consensus 265 ~~~~~----~~~g~~---p~~---~--~~~~~~~~vws~~~~~~~~~~~~~~------------------l~~~~~~~~~ 314 (409)
..... ...|.. +.+ . ..++...|+|+++. .+++++... .......+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGv--vl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (268)
T cd06624 159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGC--TIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPES 236 (268)
T ss_pred cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHH--HHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcc
Confidence 43211 111111 111 1 12456788888731 111111110 0111223444
Q ss_pred HHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 315 VVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 315 ~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
...++.+++.+||+.+|++|||+.|++.
T Consensus 237 ~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 237 LSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred cCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 5667889999999999999999999875
No 161
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.8e-33 Score=248.45 Aligned_cols=225 Identities=20% Similarity=0.326 Sum_probs=181.4
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-----C---hHHHHHHHHHHHHhccC-CCCceeeEeeEEEc
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-----S---EHGMREFLAEVSSLGRL-KHRNLVGLRGWCKK 179 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-----~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 179 (409)
.-+.|...+.||.|..+.|-++..+ |..+|+|++... + ..-.+.-.+|+.+|+++ .||||+++.+++..
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 3456788899999999999999887 889999998643 1 12234567899999999 79999999999987
Q ss_pred cCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecc
Q 048535 180 EKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDF 259 (409)
Q Consensus 180 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DF 259 (409)
+..+++|+|.|+.|.|.+|| .....+++....+|++|+.+|++||| .++||||||||+|||+|++.++||+||
T Consensus 95 -~sF~FlVFdl~prGELFDyL---ts~VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 95 -DAFVFLVFDLMPRGELFDYL---TSKVTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred -cchhhhhhhhcccchHHHHh---hhheeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEecc
Confidence 77899999999999999999 45678999999999999999999999 899999999999999999999999999
Q ss_pred cCcccccCCc---eeeeccccc------------cCCCcHHHHHHhhhcc--------------Cc---HHHHhhHHhhh
Q 048535 260 GLAKMHHHGQ---VMSGRRPIE------------EGKRNLVDRMWSLTER--------------SE---LLSVLDERLKA 307 (409)
Q Consensus 260 Gla~~~~~~~---~~~g~~p~~------------~~~~~~~~~vws~~~~--------------~~---~~~~~~~~l~~ 307 (409)
|+|+.+..++ -+||.+.+- ...|+...|.|+.+.. .. +..++.+...+
T Consensus 168 GFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF 247 (411)
T KOG0599|consen 168 GFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQF 247 (411)
T ss_pred ceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccccc
Confidence 9999988876 456665442 2567788899986211 11 11122233333
Q ss_pred cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 308 KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 308 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
..+...+....+.+|+.+|++.||.+|-|++|+++
T Consensus 248 ~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 248 RSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred CCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 34445667778899999999999999999999874
No 162
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.4e-32 Score=264.45 Aligned_cols=148 Identities=25% Similarity=0.321 Sum_probs=132.9
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|.+.+.||+|+||.||+|... ++.||+|+++.. .......+.+|+.++..++||||+++++++.+ ++..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD-EEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec-CCeEEEE
Confidence 46888999999999999999987 899999999754 22345678899999999999999999999887 7789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 80 MEYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred EcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 9999999999999643 56899999999999999999999 89999999999999999999999999999986543
No 163
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.98 E-value=1.3e-31 Score=250.04 Aligned_cols=226 Identities=27% Similarity=0.440 Sum_probs=175.2
Q ss_pred hCCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
.++|+..++||+|+||.||+|... ++.||+|.+..... ....|.+|+.++++++|+||+++++++. ....+++|||
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~ 81 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT--QEPIYIITEY 81 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc--cCCcEEEEEc
Confidence 467888999999999999999987 78999999875432 3467899999999999999999999874 4568999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV 270 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 270 (409)
+++|+|.+++... ....+++.++..++.|++.||+||| +.+++||||||+||++++++.++|+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 82 MENGSLVDFLKTP-EGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 9999999998653 3346899999999999999999999 89999999999999999999999999999986653221
Q ss_pred ee-----e---ccccc---cCCCcHHHHHHhhhccCcHHHHhh-HHhhh----------------cCCCCHHHHHHHHHH
Q 048535 271 MS-----G---RRPIE---EGKRNLVDRMWSLTERSELLSVLD-ERLKA----------------KGGYADEVVEKVLHL 322 (409)
Q Consensus 271 ~~-----g---~~p~~---~~~~~~~~~vws~~~~~~~~~~~~-~~l~~----------------~~~~~~~~~~~l~~l 322 (409)
.. + ..+.+ ...++...|+|+++ ..+++++. ..... ..+.+.....++.++
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG--~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG--ILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYEL 235 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHH--HHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 10 0 11111 23445678899874 12222221 11110 012223345679999
Q ss_pred HHHccCcCCCCCCCHHHHHHHHhc
Q 048535 323 GLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
+.+||+.+|++|||++++++.|+.
T Consensus 236 i~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 236 MRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHccCChhhCCCHHHHHHHhhc
Confidence 999999999999999999999875
No 164
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.98 E-value=2e-31 Score=256.68 Aligned_cols=211 Identities=21% Similarity=0.299 Sum_probs=156.0
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||+|... ++.||+|.++... ......+..|..++..+ +||||+++++++.+ .+..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~ey~~ 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT-KENLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe-CCEEEEEEeCCC
Confidence 46999999999999987 7889999997541 23345677788888764 99999999999987 678999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--- 269 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--- 269 (409)
+|+|.+++.. ...+++.++..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05619 80 GGDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKT 153 (316)
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCce
Confidence 9999999953 346899999999999999999999 8999999999999999999999999999987532211
Q ss_pred -eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhh---------------cCCCCHHHHHHHHHHHHHcc
Q 048535 270 -VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKA---------------KGGYADEVVEKVLHLGLLCA 327 (409)
Q Consensus 270 -~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~---------------~~~~~~~~~~~l~~l~~~Cl 327 (409)
...|...+ ....++...|+|+++ ..+++++....+. ...++......+.+++.+||
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG--~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l 231 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFG--VLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLF 231 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHH--HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHh
Confidence 11222221 124466788999984 2233333222111 11122223445667777777
Q ss_pred CcCCCCCCCHH
Q 048535 328 HPEANSRPTIR 338 (409)
Q Consensus 328 ~~dP~~RPt~~ 338 (409)
+.||++||++.
T Consensus 232 ~~~P~~R~~~~ 242 (316)
T cd05619 232 VREPERRLGVK 242 (316)
T ss_pred ccCHhhcCCCh
Confidence 77777777776
No 165
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.98 E-value=2.3e-31 Score=247.30 Aligned_cols=225 Identities=24% Similarity=0.325 Sum_probs=173.8
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|+..+.||+|++|.||+|... ++.|++|.+... .......+.+|++++++++||||+++++++.+ .+..++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD-KGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc-CCEEEEEEE
Confidence 4777899999999999999986 899999998643 34556789999999999999999999999987 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++++|.+++... ....+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||+++......
T Consensus 80 ~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 80 YAENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred eCCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 99999999999763 2356899999999999999999999 8999999999999999999999999999988654322
Q ss_pred ----eeeecccc------ccCCCcHHHHHHhhhcc-------------CcHHHHhhHHhhh-cCCCCHHHHHHHHHHHHH
Q 048535 270 ----VMSGRRPI------EEGKRNLVDRMWSLTER-------------SELLSVLDERLKA-KGGYADEVVEKVLHLGLL 325 (409)
Q Consensus 270 ----~~~g~~p~------~~~~~~~~~~vws~~~~-------------~~~~~~~~~~l~~-~~~~~~~~~~~l~~l~~~ 325 (409)
...|...+ .....+...|+|+++.- ....+........ ....+......+.+++.+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQ 235 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHH
Confidence 11222111 12334556788887310 1111111111111 112233455678999999
Q ss_pred ccCcCCCCCCCHHHHHHH
Q 048535 326 CAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 326 Cl~~dP~~RPt~~evl~~ 343 (409)
||+.+|++||++.++++.
T Consensus 236 ~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 236 CLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HccCCcccCcCHHHHhhC
Confidence 999999999999999863
No 166
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.98 E-value=4.4e-32 Score=266.77 Aligned_cols=188 Identities=20% Similarity=0.213 Sum_probs=150.0
Q ss_pred HHHHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC
Q 048535 107 EIHAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK 181 (409)
Q Consensus 107 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 181 (409)
++....++|+..+.||+|+||.||++... ++.||+|.+... .....+.+.+|+.+++.++||||+++++++.+ +
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~-~ 115 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD-D 115 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-C
Confidence 33445678999999999999999999987 789999998642 22334568899999999999999999999887 7
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccC
Q 048535 182 ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGL 261 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 261 (409)
...++||||+++|+|.+++.. ..+++..+..++.||+.||+||| +.+|+||||||+|||+++++.+||+|||+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~ 188 (370)
T cd05621 116 KYLYMVMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGT 188 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEeccc
Confidence 789999999999999999943 35889999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCc-----eeeecccccc----------CCCcHHHHHHhhhccCcHHHHhhHH
Q 048535 262 AKMHHHGQ-----VMSGRRPIEE----------GKRNLVDRMWSLTERSELLSVLDER 304 (409)
Q Consensus 262 a~~~~~~~-----~~~g~~p~~~----------~~~~~~~~vws~~~~~~~~~~~~~~ 304 (409)
|+...... ...|...+.. ..++...|+|+++ ..+++++...
T Consensus 189 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG--~ilyell~G~ 244 (370)
T cd05621 189 CMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG--VFLFEMLVGD 244 (370)
T ss_pred ceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeeh--HHHHHHHhCC
Confidence 98764322 1123222211 1245678889885 3445554433
No 167
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.98 E-value=1.7e-31 Score=252.49 Aligned_cols=183 Identities=29% Similarity=0.428 Sum_probs=145.6
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|+..+.||+|++|.||+|+.. +..||+|.++.. .....+.+.+|+.++++++||||+++++++.+ +...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ-ESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee-CCeEEEEEe
Confidence 4778899999999999999986 889999998654 22234678899999999999999999999987 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|++ ++|.+++........+++..+..++.|+++||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 997 699998865444457999999999999999999999 8999999999999999999999999999987543221
Q ss_pred ee-e---ec---cccc----cCCCcHHHHHHhhhccCcHHHHhhH
Q 048535 270 VM-S---GR---RPIE----EGKRNLVDRMWSLTERSELLSVLDE 303 (409)
Q Consensus 270 ~~-~---g~---~p~~----~~~~~~~~~vws~~~~~~~~~~~~~ 303 (409)
.. . +. .+.+ ...++...|+|+++ ..+++++..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG--~il~~l~tg 198 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIG--TIFAEMATK 198 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHH--HHHHHHHHC
Confidence 00 0 01 1111 12346778999986 334455444
No 168
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.98 E-value=1.2e-31 Score=252.29 Aligned_cols=228 Identities=20% Similarity=0.329 Sum_probs=174.5
Q ss_pred CCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccCChH-HHHHHHHHHHHhccCCCCceeeEeeEEEccCCeE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLDSEH-GMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESL 184 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 184 (409)
++|+..+.||+|+||.||+|+.. .+.||+|.+...... ..+.+.+|++++++++|+||+++++++.+ ....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCRE-AEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECC-CCcc
Confidence 57888999999999999999864 357999998755433 56789999999999999999999999876 6778
Q ss_pred EEEEEeCCCCCHHHHHhcCCCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEec
Q 048535 185 ILIYDYMENGSLDKWIFECDES------IALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGD 258 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~D 258 (409)
++||||+++|+|.+++...... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.++|+|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEcc
Confidence 9999999999999999654322 25899999999999999999999 89999999999999999999999999
Q ss_pred ccCcccccCCcee--------eecccc---ccCCCcHHHHHHhhhccCcHHHHhh----------------HHhhhc--C
Q 048535 259 FGLAKMHHHGQVM--------SGRRPI---EEGKRNLVDRMWSLTERSELLSVLD----------------ERLKAK--G 309 (409)
Q Consensus 259 FGla~~~~~~~~~--------~g~~p~---~~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~~~--~ 309 (409)
||+++........ ....+. .....+..+|+|+++. .+++++. ...... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~--~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~ 238 (275)
T cd05046 161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGV--LMWEVFTQGELPFYGLSDEEVLNRLQAGKLEL 238 (275)
T ss_pred cccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHH--HHHHHHhCCCCCccccchHHHHHHHHcCCcCC
Confidence 9998754321100 001111 1234566789999741 1111111 111000 1
Q ss_pred CCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 310 GYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 310 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
..+...+..+.+++.+||+.+|++|||+.|+++.|.+
T Consensus 239 ~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 239 PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 1123345678999999999999999999999998863
No 169
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.98 E-value=8.2e-32 Score=254.68 Aligned_cols=210 Identities=23% Similarity=0.317 Sum_probs=156.6
Q ss_pred eecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCC
Q 048535 121 IGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGS 195 (409)
Q Consensus 121 lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gs 195 (409)
||+|+||+||++... ++.||+|.+.... ....+.+..|++++++++|+||+++.+++.. ....++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT-KTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC-CCeEEEEEeCCCCCC
Confidence 699999999999886 8899999996542 2234567899999999999999999998876 678999999999999
Q ss_pred HHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce----
Q 048535 196 LDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV---- 270 (409)
Q Consensus 196 L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~---- 270 (409)
|.+++... .....+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccc
Confidence 99888543 23356899999999999999999999 89999999999999999999999999999976543321
Q ss_pred eeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhh-------------------cCCCCHHHHHHHHHHHHH
Q 048535 271 MSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKA-------------------KGGYADEVVEKVLHLGLL 325 (409)
Q Consensus 271 ~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~-------------------~~~~~~~~~~~l~~l~~~ 325 (409)
..|...+ ....++...|+|+++ ..+++++...... ...++...+..+.+++..
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG--~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 234 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALG--VTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEA 234 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHH--HHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHH
Confidence 1122211 124456778999984 2233333222111 111223344556667777
Q ss_pred ccCcCCCCCCC
Q 048535 326 CAHPEANSRPT 336 (409)
Q Consensus 326 Cl~~dP~~RPt 336 (409)
||+.||++||+
T Consensus 235 ~l~~~P~~R~~ 245 (280)
T cd05608 235 LLAKDPEKRLG 245 (280)
T ss_pred HhcCCHHHhcC
Confidence 77777777773
No 170
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.98 E-value=7.1e-32 Score=260.47 Aligned_cols=214 Identities=23% Similarity=0.282 Sum_probs=160.3
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHH-HhccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVS-SLGRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||+||+|... |+.||+|++.... ....+.+..|.. +++.++||||+++++++.. .+..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-ADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-CCEEEEEEcCCC
Confidence 46999999999999986 8999999997542 223345556655 5678999999999998887 778999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--- 269 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--- 269 (409)
+|+|.+++.. ...+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (323)
T cd05575 80 GGELFFHLQR---ERSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTT 153 (323)
T ss_pred CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcc
Confidence 9999999853 346899999999999999999999 8999999999999999999999999999987532211
Q ss_pred -eeeecccc------ccCCCcHHHHHHhhhcc-------------CcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCc
Q 048535 270 -VMSGRRPI------EEGKRNLVDRMWSLTER-------------SELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHP 329 (409)
Q Consensus 270 -~~~g~~p~------~~~~~~~~~~vws~~~~-------------~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~ 329 (409)
...|...+ ....++...|+|+++.. ....+..+..+......+......+.+++.+|++.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~ 233 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQK 233 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhc
Confidence 11222221 12345667888887411 11122222222222223334466789999999999
Q ss_pred CCCCCCCHHH
Q 048535 330 EANSRPTIRQ 339 (409)
Q Consensus 330 dP~~RPt~~e 339 (409)
||.+||++++
T Consensus 234 ~p~~R~~~~~ 243 (323)
T cd05575 234 DRTKRLGAKD 243 (323)
T ss_pred CHHhCCCCCC
Confidence 9999999863
No 171
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.98 E-value=7.8e-32 Score=257.73 Aligned_cols=255 Identities=22% Similarity=0.342 Sum_probs=184.9
Q ss_pred CCCCccceeecCCceEEEEEEEC--Cc----EEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GV----EVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
++|+..+.||+|+||.||+|.+. +. .||+|.+.... .....++.+|+.++++++||||++++|+|.. ...+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~--~~~~ 84 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS--PTIQ 84 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC--CCce
Confidence 56778899999999999999874 43 57999887553 3344578999999999999999999999875 3467
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
+++||+++|+|.+++... ...+++..+..++.|++.||.||| +++|+||||||+|||+++++.+||+|||+++..
T Consensus 85 ~v~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eeehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccc
Confidence 899999999999998643 335899999999999999999999 899999999999999999999999999999865
Q ss_pred cCCce---ee------ecccc---ccCCCcHHHHHHhhhccCcHHHHhh-HH--------------hhh--cCCCCHHHH
Q 048535 266 HHGQV---MS------GRRPI---EEGKRNLVDRMWSLTERSELLSVLD-ER--------------LKA--KGGYADEVV 316 (409)
Q Consensus 266 ~~~~~---~~------g~~p~---~~~~~~~~~~vws~~~~~~~~~~~~-~~--------------l~~--~~~~~~~~~ 316 (409)
..... .. ...+. ....++...|+|+++ ..+++++. .. +.. ....+....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG--~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYG--VTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICT 237 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHH--HHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Confidence 43221 00 11111 124456778999974 12222221 00 000 011122234
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCccc
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNE 388 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~ 388 (409)
..+.+++..||..+|++||+++++++.|+.....+.. .....+..+..+..+-.||+|.+
T Consensus 238 ~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 297 (303)
T cd05110 238 IDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQR------------YLVIQGDDRMKLPSPNDSKFFQN 297 (303)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchhh------------heeeccCCcCCCCCCchhhHHhc
Confidence 5688899999999999999999999999875433221 11222334444556666777665
No 172
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.98 E-value=5.5e-32 Score=261.29 Aligned_cols=217 Identities=24% Similarity=0.286 Sum_probs=164.1
Q ss_pred ceeecCCceEEEEEEEC-----CcEEEEEEeccC----ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 119 NVIGLGGNGKVYKGQLL-----GVEVALKRISLD----SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+.||+|+||.||+++.. ++.||+|.++.. .......+.+|+.+|+.++||||+++++++.. ++..|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT-GGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec-CCeEEEEEe
Confidence 67999999999999762 788999999753 22334567899999999999999999999887 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 81 YLSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 9999999999853 346888999999999999999999 8999999999999999999999999999987532211
Q ss_pred ----eeeecccc---c---cCCCcHHHHHHhhhcc-------------CcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHc
Q 048535 270 ----VMSGRRPI---E---EGKRNLVDRMWSLTER-------------SELLSVLDERLKAKGGYADEVVEKVLHLGLLC 326 (409)
Q Consensus 270 ----~~~g~~p~---~---~~~~~~~~~vws~~~~-------------~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~C 326 (409)
...|...+ + ...++...|+|+++.. ......+..........+......+.+++.+|
T Consensus 155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 234 (323)
T cd05584 155 TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKL 234 (323)
T ss_pred CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence 11222221 1 1234566788887311 11112222222222233444566789999999
Q ss_pred cCcCCCCCC-----CHHHHHH
Q 048535 327 AHPEANSRP-----TIRQVLK 342 (409)
Q Consensus 327 l~~dP~~RP-----t~~evl~ 342 (409)
|+.||++|| ++.++++
T Consensus 235 l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 235 LKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred cccCHhHcCCCCCCCHHHHhc
Confidence 999999999 7887765
No 173
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.98 E-value=1.1e-31 Score=259.05 Aligned_cols=208 Identities=22% Similarity=0.288 Sum_probs=156.8
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||+|+.. ++.||+|+++.. .....+.+..|.+++..+ +||||+++++++.. .+..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~-~~~~~lv~E~~~ 79 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT-KDRLFFVMEYVN 79 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-CCeEEEEEeCCC
Confidence 46999999999999987 789999999754 233456678899999876 89999999999987 678999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--- 269 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--- 269 (409)
+|+|..++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (321)
T cd05591 80 GGDLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 153 (321)
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccc
Confidence 9999999853 346899999999999999999999 8999999999999999999999999999987532211
Q ss_pred -eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHH---------------hhhcCCCCHHHHHHHHHHHHHcc
Q 048535 270 -VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDER---------------LKAKGGYADEVVEKVLHLGLLCA 327 (409)
Q Consensus 270 -~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~---------------l~~~~~~~~~~~~~l~~l~~~Cl 327 (409)
...|...+ ....++...|+|+++ ..+++++... .......+......+.+++..||
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG--~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L 231 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALG--VLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFM 231 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechh--HHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Confidence 11222222 123455667888874 2222322222 11111222334567788888888
Q ss_pred CcCCCCCC
Q 048535 328 HPEANSRP 335 (409)
Q Consensus 328 ~~dP~~RP 335 (409)
+.||++||
T Consensus 232 ~~dp~~R~ 239 (321)
T cd05591 232 TKNPNKRL 239 (321)
T ss_pred ccCHHHcC
Confidence 88888888
No 174
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.98 E-value=1.6e-31 Score=249.38 Aligned_cols=227 Identities=25% Similarity=0.441 Sum_probs=177.1
Q ss_pred hCCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
.++|.+.+.||+|+||.||+|... +..||||.+.... ...+++.+|+.++++++|+||+++++++.. ....++||||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~ 82 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSE-EEPIYIVTEY 82 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeec-CCceEEEEec
Confidence 467888999999999999999987 6789999987543 234678999999999999999999999876 5778999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV 270 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 270 (409)
+++++|.+++... ....+++..+..++.|++.||.||| +++++|+||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~~~L~~~i~~~-~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 83 MSKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred cCCCCHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 9999999999653 2346899999999999999999999 88999999999999999999999999999986543210
Q ss_pred e--------eecccc---ccCCCcHHHHHHhhhccCcHHHH----------------hhHHhhh-cCCCCHHHHHHHHHH
Q 048535 271 M--------SGRRPI---EEGKRNLVDRMWSLTERSELLSV----------------LDERLKA-KGGYADEVVEKVLHL 322 (409)
Q Consensus 271 ~--------~g~~p~---~~~~~~~~~~vws~~~~~~~~~~----------------~~~~l~~-~~~~~~~~~~~l~~l 322 (409)
. ....+. .....+...|+|+++ ..++++ .+..... ....+...+..+.++
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG--~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFG--ILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDL 236 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHH--HHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 0 001111 123456778999974 111111 1111110 012233345678999
Q ss_pred HHHccCcCCCCCCCHHHHHHHHhc
Q 048535 323 GLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
+.+||+.+|++||+++++.+.|+.
T Consensus 237 i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 237 MLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHcccCcccCCCHHHHHHHHhc
Confidence 999999999999999999999875
No 175
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.98 E-value=1.4e-31 Score=249.23 Aligned_cols=217 Identities=25% Similarity=0.409 Sum_probs=164.6
Q ss_pred ceeecCCceEEEEEEEC--C----------cEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 119 NVIGLGGNGKVYKGQLL--G----------VEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~----------~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
+.||+|+||.||+|.+. + ..|++|.+...... ...|.+|+.++++++||||+++++++.. ...++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR--DENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec--CCcEE
Confidence 46899999999999987 3 24888887654333 6789999999999999999999999876 45789
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC-------cEEEecc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM-------NARLGDF 259 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~-------~~kl~DF 259 (409)
||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++ .+||+||
T Consensus 78 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 78 VEEYVKFGPLDVFLHREK--NNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred EEEcCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 999999999999996532 26899999999999999999999 89999999999999999888 7999999
Q ss_pred cCcccccCCceeeecccc---c---cC--CCcHHHHHHhhhccCcHHHHhhH-Hh--------------hhcCCCCHHHH
Q 048535 260 GLAKMHHHGQVMSGRRPI---E---EG--KRNLVDRMWSLTERSELLSVLDE-RL--------------KAKGGYADEVV 316 (409)
Q Consensus 260 Gla~~~~~~~~~~g~~p~---~---~~--~~~~~~~vws~~~~~~~~~~~~~-~l--------------~~~~~~~~~~~ 316 (409)
|+++.........+..++ + .. .++...|+|+++. .+++++.. .. ......+....
T Consensus 153 g~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~--~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 230 (259)
T cd05037 153 GIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGT--TLLEICSNGEEPLSTLSSSEKERFYQDQHRLPMPDC 230 (259)
T ss_pred CcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHH--HHHHHHhCCCCCcccCCchhHHHHHhcCCCCCCCCc
Confidence 999875443222222221 1 12 4567789998741 12222110 00 00001111112
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
..+.+++.+||+.+|.+|||+.++++.|+
T Consensus 231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 231 AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 67889999999999999999999999874
No 176
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.1e-33 Score=266.69 Aligned_cols=221 Identities=25% Similarity=0.359 Sum_probs=179.4
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
..|+..++||+|.||.||+|.+. ++.||+|++..+ .....+++.+|+.+|..++++||.+++|.+.. +..++++||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~-g~~LwiiMe 91 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLK-GTKLWIIME 91 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheee-cccHHHHHH
Confidence 45677789999999999999997 899999999877 44557889999999999999999999999987 788999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
||.+|++.+.+. ....+.+..+.-+++++..||.||| ..+.+|||||+.|||+..+|.+||+|||++-......
T Consensus 92 y~~gGsv~~lL~---~~~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 92 YCGGGSVLDLLK---SGNILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred HhcCcchhhhhc---cCCCCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 999999999994 3444588888889999999999999 8999999999999999999999999999998765543
Q ss_pred ----eeeeccc------cccCCCcHHHHHHhhhccCcHHHHhhHHhh----------------hcCCCCHHHHHHHHHHH
Q 048535 270 ----VMSGRRP------IEEGKRNLVDRMWSLTERSELLSVLDERLK----------------AKGGYADEVVEKVLHLG 323 (409)
Q Consensus 270 ----~~~g~~p------~~~~~~~~~~~vws~~~~~~~~~~~~~~l~----------------~~~~~~~~~~~~l~~l~ 323 (409)
.+.|++- +....|+.++|+|+++- ..+++.....+ .++.....+...+.+++
T Consensus 166 ~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGI--TaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV 243 (467)
T KOG0201|consen 166 KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGI--TAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFV 243 (467)
T ss_pred hccccccccccccchhhhccccccchhhhhhhhH--HHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHH
Confidence 2233332 23367899999999952 22222221111 01223345667899999
Q ss_pred HHccCcCCCCCCCHHHHHH
Q 048535 324 LLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 324 ~~Cl~~dP~~RPt~~evl~ 342 (409)
..|++.||+.||++.++++
T Consensus 244 ~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 244 EACLDKNPEFRPSAKELLK 262 (467)
T ss_pred HHHhhcCcccCcCHHHHhh
Confidence 9999999999999999985
No 177
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.98 E-value=6e-32 Score=261.69 Aligned_cols=167 Identities=23% Similarity=0.334 Sum_probs=136.8
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||++... ++.||+|+++.. .....+.+..|..++.++ +||||+++++++.+ ....++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~-~~~~~lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT-ESRLFFVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc-CCEEEEEEeCCC
Confidence 46999999999999986 889999999754 233456688999999998 79999999999887 678999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC-C---
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH-G--- 268 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~--- 268 (409)
+|+|.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.... .
T Consensus 80 ~g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (329)
T cd05588 80 GGDLMFHMQR---QRKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTT 153 (329)
T ss_pred CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcc
Confidence 9999998853 346999999999999999999999 89999999999999999999999999999875211 1
Q ss_pred ceeeecccc------ccCCCcHHHHHHhhh
Q 048535 269 QVMSGRRPI------EEGKRNLVDRMWSLT 292 (409)
Q Consensus 269 ~~~~g~~p~------~~~~~~~~~~vws~~ 292 (409)
....|...+ ....++...|+|+++
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 183 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALG 183 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechH
Confidence 112232222 123456678888875
No 178
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.98 E-value=3.7e-31 Score=246.14 Aligned_cols=225 Identities=22% Similarity=0.296 Sum_probs=173.3
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
+|+..+.||+|+||.||++... +..+|+|.++.. .....+.+.+|+.++++++|+||+++++.+.+ .+..+++|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEA-DGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEE-CCEEEEEEee
Confidence 4778899999999999999886 889999998643 34456778899999999999999999999887 7789999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV 270 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 270 (409)
+++|+|.+++... ....+++..+..++.|++.||.||| +.+|+|+||||+||++++++.++|+|||+++.......
T Consensus 80 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 80 CDGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence 9999999998643 3345899999999999999999999 89999999999999999999999999999976543221
Q ss_pred ----eeeccc------cccCCCcHHHHHHhhhcc-------------CcHHHHhhHHhh-hcCCCCHHHHHHHHHHHHHc
Q 048535 271 ----MSGRRP------IEEGKRNLVDRMWSLTER-------------SELLSVLDERLK-AKGGYADEVVEKVLHLGLLC 326 (409)
Q Consensus 271 ----~~g~~p------~~~~~~~~~~~vws~~~~-------------~~~~~~~~~~l~-~~~~~~~~~~~~l~~l~~~C 326 (409)
..|... ......+..+|+|+++.. ............ .....+......+.+++.+|
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 235 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQM 235 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHH
Confidence 111111 112345667899987311 111111111111 01123344556789999999
Q ss_pred cCcCCCCCCCHHHHHHH
Q 048535 327 AHPEANSRPTIRQVLKM 343 (409)
Q Consensus 327 l~~dP~~RPt~~evl~~ 343 (409)
|+.||++|||+.+++..
T Consensus 236 l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 236 FKRNPRSRPSATTILSR 252 (255)
T ss_pred HhCCcccCCCHHHHhhc
Confidence 99999999999999864
No 179
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.98 E-value=1e-31 Score=254.32 Aligned_cols=225 Identities=24% Similarity=0.357 Sum_probs=170.4
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
++|+..+.||+|+||.||++... +..||+|.+... .......+.+|+.++++++||||+++++.+.. .+..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI-EGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec-CCeEEEEEe
Confidence 35788899999999999999987 899999998754 34445789999999999999999999998887 778999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++++|.+++........+++..+..++.|++.||.|||+ +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 99999999998653223478999999999999999999994 3589999999999999999999999999987653221
Q ss_pred e--eeecc---ccc---------cCCCcHHHHHHhhhccCcHHHHhhHH------------------hh-hcCCCCHHHH
Q 048535 270 V--MSGRR---PIE---------EGKRNLVDRMWSLTERSELLSVLDER------------------LK-AKGGYADEVV 316 (409)
Q Consensus 270 ~--~~g~~---p~~---------~~~~~~~~~vws~~~~~~~~~~~~~~------------------l~-~~~~~~~~~~ 316 (409)
. ..+.. +.+ ...++...|+|+++ ..+++++... .. .....+....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG--~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd06622 158 AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLG--LSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYS 235 (286)
T ss_pred cccCCCccCccCcchhcCCCCCccCCCCcccchHhHH--HHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccC
Confidence 1 11111 111 11235678888873 1112221111 11 0122334456
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
..+.+++.+||+.+|++||++.++++
T Consensus 236 ~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 236 DDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHhc
Confidence 67788888888888888888888876
No 180
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.98 E-value=6.1e-32 Score=266.38 Aligned_cols=145 Identities=22% Similarity=0.310 Sum_probs=129.5
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|++.+.||+|+||.||++... ++.||||.+.... ......+.+|+++|++++||||+++++.+.+ ++.+++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD-KDNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc-CCEEEEE
Confidence 46889999999999999999986 8899999986432 2334668899999999999999999999987 7789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
|||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|..
T Consensus 80 ~E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~ 150 (376)
T cd05598 80 MDYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 150 (376)
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCcc
Confidence 999999999999954 346889999999999999999999 89999999999999999999999999999853
No 181
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.98 E-value=1.3e-31 Score=269.03 Aligned_cols=262 Identities=19% Similarity=0.250 Sum_probs=183.4
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-------C
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-------K 181 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-------~ 181 (409)
..++|+..+.||+|+||.||+|... ++.||||++.... ....+|+.+|+.++|||||++++++... .
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3467999999999999999999986 8899999986432 2234799999999999999999877431 1
Q ss_pred CeEEEEEEeCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC-cEEEecc
Q 048535 182 ESLILIYDYMENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM-NARLGDF 259 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~-~~kl~DF 259 (409)
..+++||||+++ +|.+++... .....+++..+..++.||+.||+||| +.+|+||||||+|||++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeecc
Confidence 246799999985 787776432 23457999999999999999999999 89999999999999998665 7999999
Q ss_pred cCcccccCCce---eeecc---ccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCc
Q 048535 260 GLAKMHHHGQV---MSGRR---PIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHP 329 (409)
Q Consensus 260 Gla~~~~~~~~---~~g~~---p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~ 329 (409)
|+|+....... ..|.. +.+ ...++...|+|+++ ..+++++.......+....+. +..++..+-
T Consensus 216 Gla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG--vil~elltG~~pf~~~~~~~~---~~~i~~~~~-- 288 (440)
T PTZ00036 216 GSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLG--CIIAEMILGYPIFSGQSSVDQ---LVRIIQVLG-- 288 (440)
T ss_pred ccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHH--HHHHHHHhCCCCCCCCChHHH---HHHHHHHhC--
Confidence 99986543321 11211 111 13467889999997 456666665444322222222 233322221
Q ss_pred CCCCCCCHHHHHHHHhcCc--CCCC-----------CCCCCcchhHHhhhcccCCCCcccccccCCCCCcccccc
Q 048535 330 EANSRPTIRQVLKMLEGQT--EGTG-----------LEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINK 391 (409)
Q Consensus 330 dP~~RPt~~evl~~L~~~~--~~~~-----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~ 391 (409)
.|+..++..+-.... ..+. ...+....+++.+|+..+|.+|+++.+++.||||.++..
T Consensus 289 ----~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 289 ----TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred ----CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence 233333322111000 0000 001123479999999999999999999999999998754
No 182
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.98 E-value=2.3e-31 Score=256.90 Aligned_cols=215 Identities=19% Similarity=0.241 Sum_probs=159.8
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv 187 (409)
+|+..+.||+|+||.||+|... ++.||+|.++.. .....+.+..|..++..+ +|++|+++++++.+ .+..++|
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv 79 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT-MDRLYFV 79 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec-CCEEEEE
Confidence 5788899999999999999987 789999999754 223345677888888877 68999999998876 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++....
T Consensus 80 ~E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 80 MEYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred EcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 999999999999853 346899999999999999999999 89999999999999999999999999999975432
Q ss_pred Cc----eeeeccccc------cCCCcHHHHHHhhhccCcHHHHhhHHhhh---------------cCCCCHHHHHHHHHH
Q 048535 268 GQ----VMSGRRPIE------EGKRNLVDRMWSLTERSELLSVLDERLKA---------------KGGYADEVVEKVLHL 322 (409)
Q Consensus 268 ~~----~~~g~~p~~------~~~~~~~~~vws~~~~~~~~~~~~~~l~~---------------~~~~~~~~~~~l~~l 322 (409)
.. ...|...+. ...++...|+|+++ ..+++++....+. ...++.....++.++
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG--vil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l 231 (323)
T cd05616 154 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFG--VLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAI 231 (323)
T ss_pred CCCccccCCCChhhcCHHHhcCCCCCCccchhchh--HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHH
Confidence 11 122332221 24456778899884 2333333322211 112233344556666
Q ss_pred HHHccCcCCCCCCCH
Q 048535 323 GLLCAHPEANSRPTI 337 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~ 337 (409)
+.+|++.||++|++.
T Consensus 232 i~~~l~~~p~~R~~~ 246 (323)
T cd05616 232 CKGLMTKHPGKRLGC 246 (323)
T ss_pred HHHHcccCHHhcCCC
Confidence 666666666666666
No 183
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.98 E-value=1.9e-31 Score=248.98 Aligned_cols=222 Identities=24% Similarity=0.385 Sum_probs=171.3
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC-----hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS-----EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
++|+..+.||+|++|.||+|... ++.||+|.+.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD-DETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc-CCeEE
Confidence 57899999999999999999875 8999999986431 2234578899999999999999999999987 67899
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
+|+||+++++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+|||+++..
T Consensus 81 ~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 81 IFMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 99999999999999854 345889999999999999999999 899999999999999999999999999999754
Q ss_pred cCCce-------eeeccc---cc---cCCCcHHHHHHhhhccCcHHHHhhHHhh-----------------hcCCCCHHH
Q 048535 266 HHGQV-------MSGRRP---IE---EGKRNLVDRMWSLTERSELLSVLDERLK-----------------AKGGYADEV 315 (409)
Q Consensus 266 ~~~~~-------~~g~~p---~~---~~~~~~~~~vws~~~~~~~~~~~~~~l~-----------------~~~~~~~~~ 315 (409)
..... ..|... .+ ....+..+|+|+++ ..+++++..... .....+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (263)
T cd06625 155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVG--CTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHV 232 (263)
T ss_pred cccccccccccCCCcCccccCcceeccCCCCchhhhHHHH--HHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccC
Confidence 33210 111111 11 13356778999873 112222211110 012233445
Q ss_pred HHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 048535 316 VEKVLHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 316 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
...+.+++.+||+.+|.+|||+.++++.
T Consensus 233 ~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 233 SPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 6678899999999999999999998764
No 184
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.98 E-value=1.1e-31 Score=258.73 Aligned_cols=213 Identities=25% Similarity=0.282 Sum_probs=159.0
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHH-HhccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVS-SLGRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||+|+.. ++.||+|++.... ......+..|.. +++.++||||+++++++.+ .+..++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~-~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT-AEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc-CCEEEEEEcCCC
Confidence 46999999999999986 8899999996432 223345666655 6788999999999998887 678999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--- 269 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--- 269 (409)
+|+|..++.. ...+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (321)
T cd05603 80 GGELFFHLQR---ERCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETT 153 (321)
T ss_pred CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcc
Confidence 9999988843 346889999999999999999999 8999999999999999999999999999987532211
Q ss_pred -eeeeccccc------cCCCcHHHHHHhhhcc-------------CcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCc
Q 048535 270 -VMSGRRPIE------EGKRNLVDRMWSLTER-------------SELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHP 329 (409)
Q Consensus 270 -~~~g~~p~~------~~~~~~~~~vws~~~~-------------~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~ 329 (409)
...|...+. ...++...|+|+++.. ....+..+.........+......+.+++.+|++.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~ 233 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHK 233 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccC
Confidence 112222221 2345567888887311 11122222222222233344556788999999999
Q ss_pred CCCCCCCHH
Q 048535 330 EANSRPTIR 338 (409)
Q Consensus 330 dP~~RPt~~ 338 (409)
||.+||++.
T Consensus 234 ~p~~R~~~~ 242 (321)
T cd05603 234 DQRRRLGAK 242 (321)
T ss_pred CHhhcCCCC
Confidence 999999864
No 185
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.98 E-value=2.1e-31 Score=256.41 Aligned_cols=214 Identities=22% Similarity=0.279 Sum_probs=161.8
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||+|... ++.||+|.++.. .....+.+..|..++..+ +||||+++++++.. ....++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~-~~~~~lv~e~~~ 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT-KEHLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc-CCEEEEEEcCCC
Confidence 46999999999999986 788999999754 223345566777777654 89999999999887 678999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--- 269 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--- 269 (409)
+|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 80 gg~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~ 153 (316)
T cd05592 80 GGDLMFHIQS---SGRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKA 153 (316)
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcc
Confidence 9999999854 346899999999999999999999 8999999999999999999999999999997543211
Q ss_pred -eeeeccccc------cCCCcHHHHHHhhhccCcHHHHhhHHhh---------------hcCCCCHHHHHHHHHHHHHcc
Q 048535 270 -VMSGRRPIE------EGKRNLVDRMWSLTERSELLSVLDERLK---------------AKGGYADEVVEKVLHLGLLCA 327 (409)
Q Consensus 270 -~~~g~~p~~------~~~~~~~~~vws~~~~~~~~~~~~~~l~---------------~~~~~~~~~~~~l~~l~~~Cl 327 (409)
...|...+. ...++...|+|+++ ..+++++..... ....++......+.+++.+||
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG--~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l 231 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFG--VLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLF 231 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHH--HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHc
Confidence 222332221 23456678889874 222222222111 112233445567889999999
Q ss_pred CcCCCCCCCHHHHH
Q 048535 328 HPEANSRPTIRQVL 341 (409)
Q Consensus 328 ~~dP~~RPt~~evl 341 (409)
+.||++||++.+.+
T Consensus 232 ~~~P~~R~~~~~~l 245 (316)
T cd05592 232 ERDPTKRLGVDGDI 245 (316)
T ss_pred cCCHHHcCCChHHH
Confidence 99999999997544
No 186
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.98 E-value=4.5e-32 Score=266.77 Aligned_cols=183 Identities=21% Similarity=0.227 Sum_probs=146.6
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
..++|+..+.||+|+||.||++... ++.||+|.+... .......+.+|+.+++.++||||+++++++.+ ....+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~-~~~~~ 119 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD-DKYLY 119 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec-CCEEE
Confidence 4567999999999999999999987 889999999643 22334567899999999999999999998887 77899
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
+||||+++|+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 120 lv~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 99999999999999853 34788899999999999999999 899999999999999999999999999999865
Q ss_pred cCCc-----eeeeccccc----------cCCCcHHHHHHhhhccCcHHHHhhH
Q 048535 266 HHGQ-----VMSGRRPIE----------EGKRNLVDRMWSLTERSELLSVLDE 303 (409)
Q Consensus 266 ~~~~-----~~~g~~p~~----------~~~~~~~~~vws~~~~~~~~~~~~~ 303 (409)
.... ...|...+. ...++..+|+|+++ ..+++++..
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlG--vilyelltG 243 (370)
T cd05596 193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG--VFLYEMLVG 243 (370)
T ss_pred cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehh--HHHHHHHhC
Confidence 4322 112222111 12255678899885 334444443
No 187
>PTZ00284 protein kinase; Provisional
Probab=99.98 E-value=1.5e-31 Score=271.02 Aligned_cols=273 Identities=14% Similarity=0.179 Sum_probs=183.3
Q ss_pred HHHHHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCC------CCceeeEeeEE
Q 048535 106 QEIHAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLK------HRNLVGLRGWC 177 (409)
Q Consensus 106 ~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~g~~ 177 (409)
+++...+++|++.+.||+|+||.||+|... ++.||||+++... ...+.+..|+.++..++ |.+++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344456788999999999999999999886 7889999996432 22344556666666654 45689999998
Q ss_pred EccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCCeeeCCCC----
Q 048535 178 KKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWE-SKVLHRDIKASNVLLDKKM---- 252 (409)
Q Consensus 178 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~ivHrDlKp~NILl~~~~---- 252 (409)
..+....++|||++ +++|.+++.. ...+++..+..++.||+.||+||| . .+||||||||+|||++.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~ 273 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMK---HGPFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTVVD 273 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcccc
Confidence 87667899999998 6799998854 346999999999999999999999 5 5999999999999998765
Q ss_pred ------------cEEEecccCcccccCCc-eeeeccccc------cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCH
Q 048535 253 ------------NARLGDFGLAKMHHHGQ-VMSGRRPIE------EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYAD 313 (409)
Q Consensus 253 ------------~~kl~DFGla~~~~~~~-~~~g~~p~~------~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~ 313 (409)
.+||+|||++....... ...|...+. ...++...|+|+++ ..+++++..+..+.+....
T Consensus 274 ~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG--vil~elltG~~pf~~~~~~ 351 (467)
T PTZ00284 274 PVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMG--CIIYELYTGKLLYDTHDNL 351 (467)
T ss_pred cccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHH--HHHHHHHhCCCCCCCCChH
Confidence 49999999886543221 222332221 24567889999996 4566666655543222221
Q ss_pred HHHHHHHHH--------HHH--------ccC----cCCCCCCCHHHHHHHHhcCcCCCCCCCCCcchhHHhhhcccCCCC
Q 048535 314 EVVEKVLHL--------GLL--------CAH----PEANSRPTIRQVLKMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTS 373 (409)
Q Consensus 314 ~~~~~l~~l--------~~~--------Cl~----~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 373 (409)
+....+.++ ... ++. ..|...|. .+.... ...............|++.+|+..||.+
T Consensus 352 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 352 EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPK--HLARIA-RARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHH--HHHhhh-cccchhhhhchHHHHHHHHHhCCcChhh
Confidence 111111111 001 111 11111111 111111 1111111111223469999999999999
Q ss_pred cccccccCCCCCcccccc
Q 048535 374 SWKFAGSRGHPTFNEINK 391 (409)
Q Consensus 374 ~~~~~~~~~hp~~~~~~~ 391 (409)
|+++.+++.||||.....
T Consensus 429 R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 429 RLNARQMTTHPYVLKYYP 446 (467)
T ss_pred CCCHHHHhcCccccccCC
Confidence 999999999999987543
No 188
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.98 E-value=3.2e-31 Score=250.18 Aligned_cols=228 Identities=23% Similarity=0.371 Sum_probs=175.5
Q ss_pred CCCCccceeecCCceEEEEEEEC--C----cEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--G----VEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~----~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
.+|+..+.||+|+||.||+|.+. | ..||+|.+.... ......+.+|+.++++++||||+++++++.. ...+
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 84 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS--SQVQ 84 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--CceE
Confidence 56788899999999999999875 3 369999987653 4456789999999999999999999999875 5788
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
+||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++..
T Consensus 85 ~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 85 LITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred EEEecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 999999999999999653 335899999999999999999999 899999999999999999999999999999875
Q ss_pred cCCce---eee------cccc---ccCCCcHHHHHHhhhccCcHHHHhh-HHhhh----------------cCCCCHHHH
Q 048535 266 HHGQV---MSG------RRPI---EEGKRNLVDRMWSLTERSELLSVLD-ERLKA----------------KGGYADEVV 316 (409)
Q Consensus 266 ~~~~~---~~g------~~p~---~~~~~~~~~~vws~~~~~~~~~~~~-~~l~~----------------~~~~~~~~~ 316 (409)
..... ..+ ..+. ....++...|+|+++. .+++++. ..... ....+....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~--~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGV--TVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICT 237 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHH--HHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCC
Confidence 43221 001 1111 1244566788998741 1222221 11110 011122234
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcC
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTE 349 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 349 (409)
..+.+++.+||..||++|||+.++++.|+....
T Consensus 238 ~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 238 IDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 578899999999999999999999999987644
No 189
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.98 E-value=1e-31 Score=265.43 Aligned_cols=144 Identities=21% Similarity=0.316 Sum_probs=129.2
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
.|+..+.||+|+||.||+|... ++.||+|++... .......+.+|+.++++++||||+++++.+.+ ....++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~-~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD-KDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe-CCEEEEEE
Confidence 5888999999999999999986 789999999754 23345678899999999999999999999987 77899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
|||++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 81 E~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~ 150 (382)
T cd05625 81 DYIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 150 (382)
T ss_pred eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCcc
Confidence 99999999999954 246889999999999999999999 89999999999999999999999999999853
No 190
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.98 E-value=1.4e-31 Score=257.87 Aligned_cols=215 Identities=21% Similarity=0.276 Sum_probs=165.2
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||+|... ++.||+|.++.. .......+..|.+++..+ +||||+++++++.. .+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~ 79 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT-KDRLFFVMEYVN 79 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-CCEEEEEEcCCC
Confidence 46999999999999987 789999999754 233456678899999888 79999999999887 678999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--- 269 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--- 269 (409)
+|+|..++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||+++++.+||+|||+++......
T Consensus 80 ~~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (318)
T cd05570 80 GGDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT 153 (318)
T ss_pred CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcc
Confidence 9999998853 346999999999999999999999 8999999999999999999999999999987532111
Q ss_pred -eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHh---------------hhcCCCCHHHHHHHHHHHHHcc
Q 048535 270 -VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERL---------------KAKGGYADEVVEKVLHLGLLCA 327 (409)
Q Consensus 270 -~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l---------------~~~~~~~~~~~~~l~~l~~~Cl 327 (409)
...|...+ ....++..+|+|+++ ..+++++.... .....++......+.+++.+||
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG--vil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l 231 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALG--VLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFL 231 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHH--HHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHc
Confidence 11222221 124556778999874 12222222111 1112233345567889999999
Q ss_pred CcCCCCCCCH-----HHHHH
Q 048535 328 HPEANSRPTI-----RQVLK 342 (409)
Q Consensus 328 ~~dP~~RPt~-----~evl~ 342 (409)
+.||++|||+ .++++
T Consensus 232 ~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 232 TKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred cCCHHHcCCCCCCCHHHHhc
Confidence 9999999999 77764
No 191
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.98 E-value=5.7e-34 Score=250.17 Aligned_cols=246 Identities=20% Similarity=0.234 Sum_probs=184.9
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++.|++.+.||+|.|+.||++... |+.+|+|.++.. +..+.+++.+|+.+.+.|+|||||++.+.+.+ .+..|+|
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~-~~~~ylv 88 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLV 88 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcc-cceeEEE
Confidence 466788899999999999999876 899999998654 44467889999999999999999999998876 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC---CcEEEecccCccc
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK---MNARLGDFGLAKM 264 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~---~~~kl~DFGla~~ 264 (409)
+|+|.||+|..-|-. ....++..+-.++.||+++|.|+| .++|||||+||+|+||.+. --+||+|||+|..
T Consensus 89 Fe~m~G~dl~~eIV~---R~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVA---REFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred EecccchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEE
Confidence 999999999765532 256788899999999999999999 8999999999999999543 3489999999999
Q ss_pred ccCCceeeeccccc---------cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCH-HHHHHHHHHHHHccCcCCCCC
Q 048535 265 HHHGQVMSGRRPIE---------EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYAD-EVVEKVLHLGLLCAHPEANSR 334 (409)
Q Consensus 265 ~~~~~~~~g~~p~~---------~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~-~~~~~l~~l~~~Cl~~dP~~R 334 (409)
...+....|+.... .+.|+...|+|+.+. .++-++-..+ ++.. ....-...++..-.+.++.+=
T Consensus 163 l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGV--iLfiLL~G~~----PF~~~~~~rlye~I~~g~yd~~~~~w 236 (355)
T KOG0033|consen 163 VNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV--ILYILLVGYP----PFWDEDQHRLYEQIKAGAYDYPSPEW 236 (355)
T ss_pred eCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhH--HHHHHHhCCC----CCCCccHHHHHHHHhccccCCCCccc
Confidence 98777777665432 367888889998752 1222222222 2222 222222223322333333222
Q ss_pred CCHHHHHHHHhcCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCccc
Q 048535 335 PTIRQVLKMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNE 388 (409)
Q Consensus 335 Pt~~evl~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~ 388 (409)
|++.+ ...++..+|+.-+|.+|+|..++++|||..+
T Consensus 237 ~~is~------------------~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 237 DTVTP------------------EAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred CcCCH------------------HHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 22211 2368899999999999999999999999765
No 192
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.98 E-value=5.6e-31 Score=244.96 Aligned_cols=225 Identities=22% Similarity=0.345 Sum_probs=170.1
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|+..+.||+|++|.||++... ++.||+|.+... .....+.+.+|++++++++|+|++++++.+.......+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 5788999999999999999886 788999999654 334556789999999999999999999987654557899999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++++|.+++... ....+++.++..++.|++.||+||| +.+++|+||||+||+++.++.++|+|||+++......
T Consensus 81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 99999999999653 2346899999999999999999999 8999999999999999999999999999997654321
Q ss_pred ----eeeecccc------ccCCCcHHHHHHhhhc-------------cCcHHHHhhHHhhh-cCCCCHHHHHHHHHHHHH
Q 048535 270 ----VMSGRRPI------EEGKRNLVDRMWSLTE-------------RSELLSVLDERLKA-KGGYADEVVEKVLHLGLL 325 (409)
Q Consensus 270 ----~~~g~~p~------~~~~~~~~~~vws~~~-------------~~~~~~~~~~~l~~-~~~~~~~~~~~l~~l~~~ 325 (409)
...+...+ ....++...|+|+++. .............. ....+......+.+++.+
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 236 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIAT 236 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHH
Confidence 11122111 1234456789998731 11111111111110 012334455678888888
Q ss_pred ccCcCCCCCCCHHHHHH
Q 048535 326 CAHPEANSRPTIRQVLK 342 (409)
Q Consensus 326 Cl~~dP~~RPt~~evl~ 342 (409)
||+.||++|||+.++++
T Consensus 237 ~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 237 MLSKRPEKRPSVKSILR 253 (257)
T ss_pred HhccCcccCCCHHHHhc
Confidence 89889999998888875
No 193
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.98 E-value=3.7e-31 Score=248.36 Aligned_cols=220 Identities=21% Similarity=0.357 Sum_probs=162.0
Q ss_pred ceeecCCceEEEEEEEC----CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCC
Q 048535 119 NVIGLGGNGKVYKGQLL----GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMEN 193 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~ 193 (409)
+.||+|+||.||+|... +..+|+|.++... ......|.+|+.++++++||||+++++++.+ ....++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE-VTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CCCcEEEEECCCC
Confidence 36899999999999865 4579999987653 3344578999999999999999999999886 6678999999999
Q ss_pred CCHHHHHhcCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce-
Q 048535 194 GSLDKWIFECD--ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV- 270 (409)
Q Consensus 194 gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~- 270 (409)
|+|.+++.... .....++..+..++.|++.||.||| +.+++||||||+||+++.++++||+|||+++.......
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~ 156 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY 156 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCccee
Confidence 99999996532 2235677888899999999999999 89999999999999999999999999999975433221
Q ss_pred -----eeecc---cccc----------CCCcHHHHHHhhhccCcHHHHhh-HHhhh---------------------cCC
Q 048535 271 -----MSGRR---PIEE----------GKRNLVDRMWSLTERSELLSVLD-ERLKA---------------------KGG 310 (409)
Q Consensus 271 -----~~g~~---p~~~----------~~~~~~~~vws~~~~~~~~~~~~-~~l~~---------------------~~~ 310 (409)
..+.. +.+. ..++...|+|+++ ..+++++. ...+. .+.
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG--~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05087 157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLG--VTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPR 234 (269)
T ss_pred ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHH--HHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCc
Confidence 01111 1110 1124567888873 11222221 11100 001
Q ss_pred CCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 048535 311 YADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 311 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
........+.+++..|| .+|++|||++||++.|+
T Consensus 235 ~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 235 LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11123456788999999 58999999999999875
No 194
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.98 E-value=1.9e-31 Score=254.26 Aligned_cols=221 Identities=21% Similarity=0.334 Sum_probs=172.3
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
..+|+..+.||+|+||.||+|... ++.||+|.+........+.+.+|+.+++.++|+||+++++.+.. ....++|||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-~~~~~lv~e 97 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVME 97 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEe-CCEEEEeec
Confidence 367888999999999999999875 88999999987655556788999999999999999999999887 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|.+++.. ..+++.++..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~ 170 (296)
T cd06654 98 YLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (296)
T ss_pred ccCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence 9999999999843 35899999999999999999999 8999999999999999999999999999987643321
Q ss_pred ----eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhh------------------cCCCCHHHHHHHHH
Q 048535 270 ----VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKA------------------KGGYADEVVEKVLH 321 (409)
Q Consensus 270 ----~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~------------------~~~~~~~~~~~l~~ 321 (409)
...|...+ .....+...|+|+++ ..+++++...... ....+......+.+
T Consensus 171 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~G--vil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 248 (296)
T cd06654 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG--IMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 248 (296)
T ss_pred cccCcccCCccccCHHHHcCCCCCccchHHHHH--HHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHH
Confidence 11222211 123345678999873 1122222211110 01123344567888
Q ss_pred HHHHccCcCCCCCCCHHHHHH
Q 048535 322 LGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt~~evl~ 342 (409)
++.+||+.+|++|||+.++++
T Consensus 249 li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 249 FLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred HHHHHCcCCcccCcCHHHHhh
Confidence 999999999999999999886
No 195
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.98 E-value=1.9e-31 Score=254.33 Aligned_cols=221 Identities=22% Similarity=0.328 Sum_probs=172.6
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
.++|+..+.||+|+||.||+|... ++.||+|.+........+.+.+|+.+++.++|+||+++++++.. ....++|||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e 96 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVME 96 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEeec
Confidence 377899999999999999999975 89999999976655556778999999999999999999999987 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++++|.+++.+ ..+++.++..++.|++.||.||| +.+++||||||+|||++.++.+||+|||++.......
T Consensus 97 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 97 YLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred ccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 9999999999843 35899999999999999999999 8999999999999999999999999999987654322
Q ss_pred ----eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhc------------------CCCCHHHHHHHHH
Q 048535 270 ----VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAK------------------GGYADEVVEKVLH 321 (409)
Q Consensus 270 ----~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~------------------~~~~~~~~~~l~~ 321 (409)
...+...+ .....+...|+|+++ ..+++++....... ...+......+.+
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--vil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (297)
T cd06656 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG--IMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRD 247 (297)
T ss_pred cCcCcccCCccccCHHHHcCCCCCcHHHHHHHH--HHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHH
Confidence 11122111 123456778999974 22222222211100 0122334456778
Q ss_pred HHHHccCcCCCCCCCHHHHHH
Q 048535 322 LGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt~~evl~ 342 (409)
++.+||+.+|++||++.++++
T Consensus 248 li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 248 FLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHHHHccCChhhCcCHHHHhc
Confidence 888999999999999888877
No 196
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.98 E-value=2.3e-31 Score=256.18 Aligned_cols=211 Identities=20% Similarity=0.283 Sum_probs=157.4
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||+|+.. ++.||+|.++... ......+..|..++... +||||+++++++.+ .+..|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv~E~~~ 79 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT-KEHLFFVMEFLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-CCEEEEEECCCC
Confidence 46999999999999987 8899999997541 23345677788888755 89999999999987 678999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC----
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG---- 268 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~---- 268 (409)
+|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 80 ~g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05620 80 GGDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRA 153 (316)
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCce
Confidence 9999999854 346899999999999999999999 899999999999999999999999999998753211
Q ss_pred ceeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhh---------------cCCCCHHHHHHHHHHHHHcc
Q 048535 269 QVMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKA---------------KGGYADEVVEKVLHLGLLCA 327 (409)
Q Consensus 269 ~~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~---------------~~~~~~~~~~~l~~l~~~Cl 327 (409)
....|...+ ....++...|+|+++ ..+++++...... ....+......+.+++.+||
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG--vil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 231 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFG--VLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLF 231 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhH--HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHc
Confidence 112222222 124456678999874 2233333222211 11222233456777777888
Q ss_pred CcCCCCCCCHH
Q 048535 328 HPEANSRPTIR 338 (409)
Q Consensus 328 ~~dP~~RPt~~ 338 (409)
+.||++||++.
T Consensus 232 ~~dP~~R~~~~ 242 (316)
T cd05620 232 ERDPTRRLGVV 242 (316)
T ss_pred cCCHHHcCCCh
Confidence 88888888774
No 197
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.98 E-value=2.6e-31 Score=251.01 Aligned_cols=217 Identities=23% Similarity=0.401 Sum_probs=160.9
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
++|+..+.||+|+||.||+|... ++.||+|.+... .....+++.+|+.++++++||||+++++++.. .+..++|||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-ENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-CCEEEEEEe
Confidence 36788899999999999999875 889999998755 34455679999999999999999999999987 678899999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|..+. .+++..+..++.|++.||.||| +.+|+|+||||+|||++.++.+||+|||++.......
T Consensus 80 ~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~ 149 (279)
T cd06619 80 FMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI 149 (279)
T ss_pred cCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc
Confidence 99999997653 3788889999999999999999 8999999999999999999999999999997654321
Q ss_pred --eeeeccc---cc---cCCCcHHHHHHhhhccCcHHHHhhHHhhhcC-----------------------C-CCHHHHH
Q 048535 270 --VMSGRRP---IE---EGKRNLVDRMWSLTERSELLSVLDERLKAKG-----------------------G-YADEVVE 317 (409)
Q Consensus 270 --~~~g~~p---~~---~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~-----------------------~-~~~~~~~ 317 (409)
...|... .+ ...++...|+|+++ ..+++++....+... . .......
T Consensus 150 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG--~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (279)
T cd06619 150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLG--ISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSE 227 (279)
T ss_pred ccCCCCChhhcCceeecCCCCCCcchHHHHH--HHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCH
Confidence 1112111 11 23456678999874 223333322211100 0 0111233
Q ss_pred HHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 318 KVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 318 ~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.+.+++.+||+.+|++||+++|+++
T Consensus 228 ~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 228 KFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred HHHHHHHHHhhCChhhCCCHHHHhc
Confidence 4566666667666777776666654
No 198
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.98 E-value=5.4e-31 Score=244.88 Aligned_cols=221 Identities=28% Similarity=0.452 Sum_probs=173.4
Q ss_pred ceeecCCceEEEEEEEC-----CcEEEEEEeccCChH-HHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL-----GVEVALKRISLDSEH-GMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||+|... +..||+|.+...... ..+.+.+|++.+..++|+||+++++++.. ....+++|||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-EEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-CCceEEEEEecc
Confidence 46999999999999886 678999999766333 36789999999999999999999999987 778999999999
Q ss_pred CCCHHHHHhcCCC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 193 NGSLDKWIFECDE------SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 193 ~gsL~~~l~~~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
+|+|.+++..... ...+++..+..++.|+++||+||| +.+++|+||||+||+++.++.+||+|||.++...
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEcccccccccc
Confidence 9999999965321 257999999999999999999999 8999999999999999999999999999998765
Q ss_pred CCce------eee---cccc---ccCCCcHHHHHHhhhccCcHHHHhh----------------HHhh-hcCCCCHHHHH
Q 048535 267 HGQV------MSG---RRPI---EEGKRNLVDRMWSLTERSELLSVLD----------------ERLK-AKGGYADEVVE 317 (409)
Q Consensus 267 ~~~~------~~g---~~p~---~~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~-~~~~~~~~~~~ 317 (409)
.... ..+ ..+. ....++...|+|+++ ..+++++. .... .....+...+.
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFG--VLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPD 234 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHH--HHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCCh
Confidence 4320 000 1111 123556778999874 11222211 1110 01123344567
Q ss_pred HHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 048535 318 KVLHLGLLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 318 ~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
.+.+++.+||+.+|.+|||+.|+++.|+
T Consensus 235 ~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 235 ELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 8999999999999999999999999874
No 199
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.98 E-value=3.6e-31 Score=245.53 Aligned_cols=220 Identities=26% Similarity=0.415 Sum_probs=171.9
Q ss_pred ceeecCCceEEEEEEEC-CcEEEEEEeccCCh-HHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCCH
Q 048535 119 NVIGLGGNGKVYKGQLL-GVEVALKRISLDSE-HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGSL 196 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gsL 196 (409)
+.||+|+||.||++... ++.||+|.+..... .....+.+|++++++++|+||+++++++.+ ....++||||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQ-KQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-CCCeEEEEEcCCCCcH
Confidence 46899999999999987 89999999876533 356789999999999999999999999987 6788999999999999
Q ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCceeee---
Q 048535 197 DKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVMSG--- 273 (409)
Q Consensus 197 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~g--- 273 (409)
.+++... ...+++..+..++.|++.||.||| +++++||||||+|||++.++.+||+|||+++..........
T Consensus 80 ~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 80 LTFLRKK--KNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 9999643 235889999999999999999999 89999999999999999999999999999986542211100
Q ss_pred ------cccc---ccCCCcHHHHHHhhhccCcHHHHhh---------------HHhhh--cCCCCHHHHHHHHHHHHHcc
Q 048535 274 ------RRPI---EEGKRNLVDRMWSLTERSELLSVLD---------------ERLKA--KGGYADEVVEKVLHLGLLCA 327 (409)
Q Consensus 274 ------~~p~---~~~~~~~~~~vws~~~~~~~~~~~~---------------~~l~~--~~~~~~~~~~~l~~l~~~Cl 327 (409)
..+. ....++...|+|+++ ..+++++. ..+.. ....+...+..+.+++.+||
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG--~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 232 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYG--ILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCW 232 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHH--HHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHh
Confidence 1111 124456778999974 11122111 11110 01223345578999999999
Q ss_pred CcCCCCCCCHHHHHHHHhc
Q 048535 328 HPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 328 ~~dP~~RPt~~evl~~L~~ 346 (409)
+.+|.+|||+.|+++.|+.
T Consensus 233 ~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 233 AYDPENRPSFSEIYNELQI 251 (251)
T ss_pred ccChhhCcCHHHHHHHhhC
Confidence 9999999999999999863
No 200
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.98 E-value=1.6e-31 Score=258.69 Aligned_cols=167 Identities=23% Similarity=0.333 Sum_probs=136.3
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||++... ++.||+|.++.. .....+.+..|+.++.++ +||||+++++++.. .+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~E~~~ 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFFVIEYVN 79 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-CCEEEEEEeCCC
Confidence 46999999999999987 789999999754 334456688899988877 89999999999887 678999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC----
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG---- 268 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~---- 268 (409)
+|+|..++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 80 ~~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~ 153 (329)
T cd05618 80 GGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 153 (329)
T ss_pred CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcc
Confidence 9999998853 346999999999999999999999 899999999999999999999999999999753211
Q ss_pred ceeeecccc------ccCCCcHHHHHHhhh
Q 048535 269 QVMSGRRPI------EEGKRNLVDRMWSLT 292 (409)
Q Consensus 269 ~~~~g~~p~------~~~~~~~~~~vws~~ 292 (409)
....|...+ ....++...|+|+++
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 183 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALG 183 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceeccc
Confidence 112232222 123456678899885
No 201
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.98 E-value=2e-32 Score=240.92 Aligned_cols=231 Identities=25% Similarity=0.262 Sum_probs=180.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEc----cCCeEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKK----EKESLI 185 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~~ 185 (409)
.++|.+.+.||+|||+.||+++.- ++.+|+|++.....++.+..++|++..++++||||+++++++.. .....|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 467899999999999999999864 88999999988877888999999999999999999999988754 234599
Q ss_pred EEEEeCCCCCHHHHHhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 186 LIYDYMENGSLDKWIFECDE-SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
|++.|...|+|.+.+..... +..+++.+.+.|+.+|++||.+||+. ..+++||||||.|||+.+++.++|.|||.++.
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 99999999999999876543 34799999999999999999999943 34599999999999999999999999999875
Q ss_pred ccCCc----------------eeeeccccc------cCCCcHHHHHHhhhccCcHHHHhh--------------------
Q 048535 265 HHHGQ----------------VMSGRRPIE------EGKRNLVDRMWSLTERSELLSVLD-------------------- 302 (409)
Q Consensus 265 ~~~~~----------------~~~g~~p~~------~~~~~~~~~vws~~~~~~~~~~~~-------------------- 302 (409)
..-.- .....++.+ ....+...|+|+++ ..++.++-
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLG--CtLYa~mf~~sPfe~~~~~GgSlaLAv~ 256 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLG--CTLYAMMFGESPFERIYQQGGSLALAVQ 256 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhh--HHHHHHHHcCCcchHHhhcCCeEEEeee
Confidence 43210 000111111 12345678999985 33333222
Q ss_pred -HHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 303 -ERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 303 -~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
+.+..+ .....++.+.+++.+|++.||.+||++.+++..++..
T Consensus 257 n~q~s~P--~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 257 NAQISIP--NSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred ccccccC--CCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 112111 1122567899999999999999999999999988764
No 202
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=253.11 Aligned_cols=230 Identities=25% Similarity=0.382 Sum_probs=170.0
Q ss_pred hCCCCccceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhcc--CCCCceeeEeeEEEccCC---eEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGR--LKHRNLVGLRGWCKKEKE---SLIL 186 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~~---~~~l 186 (409)
.+.....+.||+|.||+||+|.|+|+.||||++...++ +.+.+|.++.+. |+|+||+.+++.-..+.+ ++||
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred hheeEEEEEecCccccceeeccccCCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 35566779999999999999999999999999975543 567788888775 499999999986554332 5899
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCceeecCCCCCCeeeCCCCcEEEecccC
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEG-----WESKVLHRDIKASNVLLDKKMNARLGDFGL 261 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 261 (409)
|++|.++|||++||.. ..++....++++..+|.||++||.+ ..+.|.|||||+.|||+..++.+.|+|+||
T Consensus 287 vTdYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL 362 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 362 (513)
T ss_pred eeecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence 9999999999999943 5799999999999999999999963 357799999999999999999999999999
Q ss_pred cccccCCc--------eeeecccccc-------------------CCCcHHHHHHhhhccCc------------------
Q 048535 262 AKMHHHGQ--------VMSGRRPIEE-------------------GKRNLVDRMWSLTERSE------------------ 296 (409)
Q Consensus 262 a~~~~~~~--------~~~g~~p~~~-------------------~~~~~~~~vws~~~~~~------------------ 296 (409)
|-...... .-.|.+-+.. +.|.+.--+|+...+..
T Consensus 363 Av~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~ 442 (513)
T KOG2052|consen 363 AVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPS 442 (513)
T ss_pred eEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCC
Confidence 97655432 1112211110 22233333444422211
Q ss_pred ---HHHHhh----HHhhhcCCC-----CHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCC
Q 048535 297 ---LLSVLD----ERLKAKGGY-----ADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEG 350 (409)
Q Consensus 297 ---~~~~~~----~~l~~~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 350 (409)
..++.+ .+++ +.. ..+.+..+.+++..||..||..|-|+-.+-+.|.++.+.
T Consensus 443 DPs~eeMrkVVCv~~~R--P~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 443 DPSFEEMRKVVCVQKLR--PNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS 506 (513)
T ss_pred CCCHHHHhcceeecccC--CCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence 111111 1111 111 235667889999999999999999999999988876653
No 203
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.97 E-value=5e-31 Score=245.45 Aligned_cols=219 Identities=23% Similarity=0.348 Sum_probs=169.7
Q ss_pred ceeecCCceEEEEEEEC---C--cEEEEEEeccCCh-HHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL---G--VEVALKRISLDSE-HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~---~--~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|++|.||+|.+. + ..||+|.+..... ...+.|.+|+.++++++||||+++++++.. ...++||||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT--HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC--CeEEEEEEecC
Confidence 46899999999999875 2 3699999987655 567789999999999999999999999876 67899999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce--
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV-- 270 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-- 270 (409)
+|+|.+++..... ..+++..+..++.|++.||+||| +.+++|+||||+||+++.++.+||+|||+++.......
T Consensus 79 ~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 79 LGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 9999999975432 46899999999999999999999 89999999999999999999999999999987644210
Q ss_pred -----ee---eccccc---cCCCcHHHHHHhhhccCcHHHHhh----------------HHhh--hcCCCCHHHHHHHHH
Q 048535 271 -----MS---GRRPIE---EGKRNLVDRMWSLTERSELLSVLD----------------ERLK--AKGGYADEVVEKVLH 321 (409)
Q Consensus 271 -----~~---g~~p~~---~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~--~~~~~~~~~~~~l~~ 321 (409)
.. +..+.+ ...++..+|+|+++ ..+++++. .... .....+...+..+.+
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG--~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFG--VTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYN 232 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHH--HHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHH
Confidence 00 111111 13455668888874 11122211 1110 011122344568899
Q ss_pred HHHHccCcCCCCCCCHHHHHHHHh
Q 048535 322 LGLLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
++.+||+.+|++|||+.++++.|.
T Consensus 233 li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 233 VMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHHHCCCCcccCCCHHHHHHHhc
Confidence 999999999999999999999875
No 204
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=3.9e-31 Score=255.35 Aligned_cols=216 Identities=19% Similarity=0.242 Sum_probs=157.7
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCC-CCceeeEeeEEEccCCeEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLK-HRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~lv 187 (409)
+|+..+.||+|+||.||+|... ++.||+|+++.. .....+.+..|..++..+. |++|+++++++.+ .+..|+|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv 79 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT-VDRLYFV 79 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec-CCEEEEE
Confidence 4677899999999999999986 889999999754 2234466888999998885 5678888888776 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++|+|.+++.. ...+++.++..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~Ey~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 80 MEYVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred EcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 999999999999853 346999999999999999999999 89999999999999999999999999999875432
Q ss_pred Cc----eeeeccccc------cCCCcHHHHHHhhhccCcHHHHhhHHhhh---------------cCCCCHHHHHHHHHH
Q 048535 268 GQ----VMSGRRPIE------EGKRNLVDRMWSLTERSELLSVLDERLKA---------------KGGYADEVVEKVLHL 322 (409)
Q Consensus 268 ~~----~~~g~~p~~------~~~~~~~~~vws~~~~~~~~~~~~~~l~~---------------~~~~~~~~~~~l~~l 322 (409)
.. ...|...+. ...++...|+|+++ ..+++++...... ...++......+.++
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG--vil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~l 231 (323)
T cd05615 154 DGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYG--VLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSI 231 (323)
T ss_pred CCccccCccCCccccCHHHHcCCCCCCccchhhhH--HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHH
Confidence 11 122322221 23456678899885 2233333322211 112222334455566
Q ss_pred HHHccCcCCCCCCCHH
Q 048535 323 GLLCAHPEANSRPTIR 338 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~ 338 (409)
+.+||+.+|.+|++..
T Consensus 232 i~~~l~~~p~~R~~~~ 247 (323)
T cd05615 232 CKGLMTKHPSKRLGCG 247 (323)
T ss_pred HHHHcccCHhhCCCCC
Confidence 6666666666666553
No 205
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.97 E-value=2.3e-31 Score=249.76 Aligned_cols=227 Identities=20% Similarity=0.297 Sum_probs=175.1
Q ss_pred CCCCccceeecCCceEEEEEEEC-----CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-----GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
++|...+.||+|+||.||+|.+. ...||+|...... ....+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~l 83 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE--NPVWI 83 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC--CCcEE
Confidence 45788899999999999999875 2469999987654 4566789999999999999999999998875 45789
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+++|+||||+|||++.++.+||+|||+++...
T Consensus 84 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 84 VMELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeecc
Confidence 99999999999999642 235899999999999999999999 8999999999999999999999999999998654
Q ss_pred CCceeee--------ccccc---cCCCcHHHHHHhhhccCcHHHHh----------------hHHhh-hcCCCCHHHHHH
Q 048535 267 HGQVMSG--------RRPIE---EGKRNLVDRMWSLTERSELLSVL----------------DERLK-AKGGYADEVVEK 318 (409)
Q Consensus 267 ~~~~~~g--------~~p~~---~~~~~~~~~vws~~~~~~~~~~~----------------~~~l~-~~~~~~~~~~~~ 318 (409)
....... ..+.+ ...++...|+|+++. .+++++ ..... .....+...+..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~--il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV--CMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT 236 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHH--HHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHH
Confidence 4321111 11111 233456788998731 111111 11000 001223445668
Q ss_pred HHHHHHHccCcCCCCCCCHHHHHHHHhcCc
Q 048535 319 VLHLGLLCAHPEANSRPTIRQVLKMLEGQT 348 (409)
Q Consensus 319 l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 348 (409)
+.+++.+||..+|++|||+.++++.|++..
T Consensus 237 ~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 237 LYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 999999999999999999999999998754
No 206
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3.9e-31 Score=265.71 Aligned_cols=260 Identities=18% Similarity=0.135 Sum_probs=178.3
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
.+|.+.+.||+|+||.||+|... ++.||||.... ..+.+|+++|++++|+|||++++++.. .+..++|||+
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~-~~~~~lv~e~ 241 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVV-GGLTCLVLPK 241 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEE-CCEEEEEEEc
Confidence 36888999999999999999987 78899996432 345689999999999999999999887 6788999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc-
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ- 269 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~- 269 (409)
+. |+|.+++... ...+++.++..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 242 ~~-~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 242 YR-SDLYTYLGAR--LRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred cC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 95 6999988542 236999999999999999999999 8999999999999999999999999999998654321
Q ss_pred -----eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhc----CCCCHHHHHHHHHHHHHccCcCC--C
Q 048535 270 -----VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAK----GGYADEVVEKVLHLGLLCAHPEA--N 332 (409)
Q Consensus 270 -----~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~----~~~~~~~~~~l~~l~~~Cl~~dP--~ 332 (409)
...|...+ ....++..+|+|+++ ..+++++....... ..........+.+++..+-...+ .
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlG--viL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 393 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAG--LVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP 393 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHH--HHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence 12233222 124467789999996 34455433211000 00001111223333333211111 0
Q ss_pred CCCCHHHHHHHHhc----CcCC--CCC------CCCCcchhHHhhhcccCCCCcccccccCCCCCccc
Q 048535 333 SRPTIRQVLKMLEG----QTEG--TGL------EDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNE 388 (409)
Q Consensus 333 ~RPt~~evl~~L~~----~~~~--~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~ 388 (409)
..+.. .+...+.. .... ... .......+++.+|++.||.+|.++++++.||||+.
T Consensus 394 ~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 394 QHAGS-RLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred CCcch-HHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 11111 11111110 0000 000 01113468999999999999999999999999964
No 207
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.97 E-value=6.2e-31 Score=244.68 Aligned_cols=225 Identities=23% Similarity=0.328 Sum_probs=172.9
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|+..+.||.|+||.||.+... ++.+++|.+... +....+++.+|++++++++|+||+++++++.+ .+..+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD-DNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec-CCeEEEEEE
Confidence 4788899999999999988876 889999998654 34556789999999999999999999999987 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|.+++.... ...+++.++..++.|+++||.||| +.+++|+||||+||++++++.+||+|||+++......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 80 YANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred ecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 999999999996532 346899999999999999999999 8899999999999999999999999999998654332
Q ss_pred ----eeeecccc------ccCCCcHHHHHHhhhc-------------cCcHHHHhhHHhhh-cCCCCHHHHHHHHHHHHH
Q 048535 270 ----VMSGRRPI------EEGKRNLVDRMWSLTE-------------RSELLSVLDERLKA-KGGYADEVVEKVLHLGLL 325 (409)
Q Consensus 270 ----~~~g~~p~------~~~~~~~~~~vws~~~-------------~~~~~~~~~~~l~~-~~~~~~~~~~~l~~l~~~ 325 (409)
...|...+ .....+..+|+|+++. .....+........ ....+......+.+++.+
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHS 235 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHH
Confidence 11121111 1123455678888731 11111222111110 011223345678999999
Q ss_pred ccCcCCCCCCCHHHHHHH
Q 048535 326 CAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 326 Cl~~dP~~RPt~~evl~~ 343 (409)
||+.+|.+||++.++++.
T Consensus 236 ~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 236 LLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HcccCcccCCCHHHHhhC
Confidence 999999999999999875
No 208
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.9e-31 Score=259.77 Aligned_cols=263 Identities=16% Similarity=0.205 Sum_probs=183.3
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
...+|++.+.||+|+||.||+|... +..||+|..... ....|+.++++++||||+++++++.. ....++||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 136 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVS-GAITCMVL 136 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEe-CCeeEEEE
Confidence 4468999999999999999999987 678999986433 23469999999999999999999987 67889999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
||+. |+|.+++.. ....+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 137 e~~~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 210 (357)
T PHA03209 137 PHYS-SDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA 210 (357)
T ss_pred EccC-CcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccccC
Confidence 9995 599998864 2346899999999999999999999 899999999999999999999999999999754322
Q ss_pred c---eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCC--CC-----HHHHHHHHHHHHHccCcCCC
Q 048535 269 Q---VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGG--YA-----DEVVEKVLHLGLLCAHPEAN 332 (409)
Q Consensus 269 ~---~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~--~~-----~~~~~~l~~l~~~Cl~~dP~ 332 (409)
. ...|...+ ....++...|+|+++ ..+++++......... .. ......+.+++ .++...|.
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG--vvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~ 287 (357)
T PHA03209 211 PAFLGLAGTVETNAPEVLARDKYNSKADIWSAG--IVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKII-STLKVHPE 287 (357)
T ss_pred cccccccccccccCCeecCCCCCCchhhHHHHH--HHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHH-HHhccChh
Confidence 1 11222211 124567789999986 3445554311110000 00 11122333333 33444554
Q ss_pred CCC--CHHHHHHH-Hhc--CcCCCC--------CCCCCcchhHHhhhcccCCCCcccccccCCCCCcccc
Q 048535 333 SRP--TIRQVLKM-LEG--QTEGTG--------LEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEI 389 (409)
Q Consensus 333 ~RP--t~~evl~~-L~~--~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~ 389 (409)
..| .-..+... +.. ....+. ..-+....+++.+|++.+|.+|+++.++++||||+.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 288 EFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred hcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 444 11222221 111 000000 0111223578999999999999999999999999864
No 209
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=2.1e-31 Score=251.13 Aligned_cols=220 Identities=25% Similarity=0.375 Sum_probs=171.3
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
.|+..+.||+|+||.||+|.+. +..||+|.+... .....+.+.+|+.++++++||||+++++++.. ++..++||||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 83 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLK-GTKLWIIMEY 83 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccccc-CCceEEEEEc
Confidence 3556688999999999999886 788999998754 34455679999999999999999999999887 6789999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV 270 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 270 (409)
+++++|.+++.. ..+++..+..++.|+++||.||| +++++|+||+|+||++++++.+||+|||+++.......
T Consensus 84 ~~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 84 LGGGSALDLLKP----GPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred cCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence 999999999842 46899999999999999999999 89999999999999999999999999999976543221
Q ss_pred ----eeecc---cc---ccCCCcHHHHHHhhhccCcHHHHhhHHhhh----------------cCCCCHHHHHHHHHHHH
Q 048535 271 ----MSGRR---PI---EEGKRNLVDRMWSLTERSELLSVLDERLKA----------------KGGYADEVVEKVLHLGL 324 (409)
Q Consensus 271 ----~~g~~---p~---~~~~~~~~~~vws~~~~~~~~~~~~~~l~~----------------~~~~~~~~~~~l~~l~~ 324 (409)
..|.. +. ....++...|+|+++ ..+++++...... ...........+.+++.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG--~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 234 (277)
T cd06642 157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLG--ITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVE 234 (277)
T ss_pred hhhcccCcccccCHHHhCcCCCchhhhHHHHH--HHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHH
Confidence 11111 11 123456778999974 2222222221110 01122234567899999
Q ss_pred HccCcCCCCCCCHHHHHHH
Q 048535 325 LCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 325 ~Cl~~dP~~RPt~~evl~~ 343 (409)
+||+.+|++|||+.++++.
T Consensus 235 ~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 235 ACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHccCCcccCcCHHHHHHh
Confidence 9999999999999999974
No 210
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=2.3e-31 Score=260.73 Aligned_cols=146 Identities=27% Similarity=0.302 Sum_probs=130.8
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|+..+.||+|+||.||++... ++.||+|+++.. .......+.+|+.++..++||||+++++.+.+ .+..++|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD-KRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCEEEEE
Confidence 46888999999999999999986 889999999643 23345678899999999999999999999887 7789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
|||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~ 151 (360)
T cd05627 80 MEFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGL 151 (360)
T ss_pred EeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCccc
Confidence 999999999999953 346899999999999999999999 899999999999999999999999999998754
No 211
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-32 Score=270.13 Aligned_cols=221 Identities=24% Similarity=0.360 Sum_probs=177.5
Q ss_pred CCccceeecCCceEEEEEEEC---C--cEEEEEEeccCChH-HHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLL---G--VEVALKRISLDSEH-GMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~---~--~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
....++||+|.||.|++|.|. | ..||||.++.+... ...+|++|+.+|.+|+|||+++|||...+ ..+.+||
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~--qp~mMV~ 189 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD--QPAMMVF 189 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc--chhhHHh
Confidence 344578999999999999997 4 45899999877443 67899999999999999999999999985 5678999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
|+++.|||.+.|++ ..+..|.......++.|||.||.||. .+++|||||.++|+||-....+|||||||.|-+...
T Consensus 190 ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 99999999999987 45567888899999999999999999 899999999999999999999999999999987655
Q ss_pred c---eeeecccc----------ccCCCcHHHHHHhhh-------ccC----------cHHHHhhHHhhhcCCCCHHHHHH
Q 048535 269 Q---VMSGRRPI----------EEGKRNLVDRMWSLT-------ERS----------ELLSVLDERLKAKGGYADEVVEK 318 (409)
Q Consensus 269 ~---~~~g~~p~----------~~~~~~~~~~vws~~-------~~~----------~~~~~~~~~l~~~~~~~~~~~~~ 318 (409)
+ ++++.++. ....++-++|+|.++ .-+ .+++.+|.+-+ -+-+..+++.
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~er--LpRPk~csed 343 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGER--LPRPKYCSED 343 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccccc--CCCCCCChHH
Confidence 4 33333222 124556666766652 111 23344443222 3446678889
Q ss_pred HHHHHHHccCcCCCCCCCHHHHHHH
Q 048535 319 VLHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 319 l~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
+++++..||..+|.+|||+..+.+.
T Consensus 344 IY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 344 IYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred HHHHHHHhccCCccccccHHHHHHh
Confidence 9999999999999999999999743
No 212
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=6.6e-31 Score=248.37 Aligned_cols=181 Identities=23% Similarity=0.342 Sum_probs=144.8
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
++|+..+.||+|+||.||+|... ++.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR-KRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee-CCEEEEEE
Confidence 46888899999999999999986 8899999986442 2234568899999999999999999999987 67899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
||+++++|..++.. ...+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~~---~~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 80 EYCDHTVLNELEKN---PRGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred eccCccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 99999988887742 345899999999999999999999 899999999999999999999999999999875443
Q ss_pred c----eeeecccc---c----cCCCcHHHHHHhhhccCcHHHHhh
Q 048535 269 Q----VMSGRRPI---E----EGKRNLVDRMWSLTERSELLSVLD 302 (409)
Q Consensus 269 ~----~~~g~~p~---~----~~~~~~~~~vws~~~~~~~~~~~~ 302 (409)
. ...+...+ + ...++...|+|+++ ..+++++.
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG--~i~~~l~~ 196 (286)
T cd07847 154 GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIG--CVFAELLT 196 (286)
T ss_pred cccccCcccccccCCHHHHhCCCCcCchhhhHHHH--HHHHHHHh
Confidence 2 11111111 1 12346678999985 23444443
No 213
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.97 E-value=7.1e-31 Score=245.21 Aligned_cols=226 Identities=23% Similarity=0.422 Sum_probs=174.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
.++|+..+.||+|+||.||++... +..+|+|.+... ....+.|.+|+.++++++|+||+++++.+.. ...+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~v~e~ 81 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIITEF 81 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC--CCeEEEEEe
Confidence 467889999999999999999876 677999988754 3345679999999999999999999998875 568999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV 270 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 270 (409)
+++|+|.+++... ....+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 157 (260)
T cd05073 82 MAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 157 (260)
T ss_pred CCCCcHHHHHHhC-CccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence 9999999999653 2346889999999999999999999 88999999999999999999999999999976543221
Q ss_pred e--ee------cccc---ccCCCcHHHHHHhhhccCcHHHHhh-HHhh--------------h--cCCCCHHHHHHHHHH
Q 048535 271 M--SG------RRPI---EEGKRNLVDRMWSLTERSELLSVLD-ERLK--------------A--KGGYADEVVEKVLHL 322 (409)
Q Consensus 271 ~--~g------~~p~---~~~~~~~~~~vws~~~~~~~~~~~~-~~l~--------------~--~~~~~~~~~~~l~~l 322 (409)
. .+ ..+. ....++...|+|+++. .+++++. .... . ..+.+......+.++
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~--~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGI--LLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNI 235 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHH--HHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHH
Confidence 1 01 1111 1234456778998741 1222221 1110 0 011223345678999
Q ss_pred HHHccCcCCCCCCCHHHHHHHHhc
Q 048535 323 GLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
+.+||+.+|++||++.++.+.|+.
T Consensus 236 i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 236 MMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHcccCcccCcCHHHHHHHHhc
Confidence 999999999999999999999975
No 214
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=8.6e-31 Score=247.08 Aligned_cols=221 Identities=26% Similarity=0.365 Sum_probs=173.9
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
..|+..+.||+|+||.||+|.+. +..||+|.+... .......+.+|+.++++++||||+++++++.+ ....++|||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 82 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-GTKLWIIME 82 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCEEEEEEe
Confidence 35677889999999999999986 789999998754 34556789999999999999999999999987 778999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|.+++.. ..+++.++..++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06640 83 YLGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred cCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence 9999999999843 35899999999999999999999 8999999999999999999999999999997654322
Q ss_pred e----eeec---ccc---ccCCCcHHHHHHhhhccCcHHHHhhHHhhh----------------cCCCCHHHHHHHHHHH
Q 048535 270 V----MSGR---RPI---EEGKRNLVDRMWSLTERSELLSVLDERLKA----------------KGGYADEVVEKVLHLG 323 (409)
Q Consensus 270 ~----~~g~---~p~---~~~~~~~~~~vws~~~~~~~~~~~~~~l~~----------------~~~~~~~~~~~l~~l~ 323 (409)
. ..+. .+. .....+...|+|+++ ..+++++...... ...........+.+++
T Consensus 156 ~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG--~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 233 (277)
T cd06640 156 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLG--ITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFI 233 (277)
T ss_pred cccccccCcccccCHhHhccCCCccHHHHHHHH--HHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHH
Confidence 1 1111 111 123456788999974 1222222211110 1223345667889999
Q ss_pred HHccCcCCCCCCCHHHHHHH
Q 048535 324 LLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 324 ~~Cl~~dP~~RPt~~evl~~ 343 (409)
.+||+.+|++||++.++++.
T Consensus 234 ~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 234 DACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHHcccCcccCcCHHHHHhC
Confidence 99999999999999999764
No 215
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.97 E-value=6.5e-31 Score=246.80 Aligned_cols=220 Identities=20% Similarity=0.326 Sum_probs=160.2
Q ss_pred ceeecCCceEEEEEEEC----CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCC
Q 048535 119 NVIGLGGNGKVYKGQLL----GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMEN 193 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~ 193 (409)
++||+|+||.||+|... ...+++|.+... .....+.|.+|+.+++.++||||+++++.|.+ ....++||||+++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~ 79 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-AIPYLLVFEYCEL 79 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC-CCccEEEEecCCC
Confidence 36999999999999764 235677877654 33456789999999999999999999999987 6778999999999
Q ss_pred CCHHHHHhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---
Q 048535 194 GSLDKWIFECDE-SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--- 269 (409)
Q Consensus 194 gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--- 269 (409)
|+|.+++..... ....++..+..++.||+.||+||| +.+++||||||+|||++.++.+||+|||++.......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 156 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE 156 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence 999999975322 234677788899999999999999 8999999999999999999999999999986422111
Q ss_pred ---eeeeccc---cc----------cCCCcHHHHHHhhhccCcHHHH----------------hhHHhhh------cCCC
Q 048535 270 ---VMSGRRP---IE----------EGKRNLVDRMWSLTERSELLSV----------------LDERLKA------KGGY 311 (409)
Q Consensus 270 ---~~~g~~p---~~----------~~~~~~~~~vws~~~~~~~~~~----------------~~~~l~~------~~~~ 311 (409)
...+... .+ ...++...|+|+++. .++++ +...+.. .+..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~--~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGV--TLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQL 234 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHH--HHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCcc
Confidence 1111111 11 012345678888731 11111 1111110 0111
Q ss_pred CHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 048535 312 ADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 312 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
.......+.+++..|| .+|++||+++++++.|.
T Consensus 235 ~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 235 ELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 2224556788999999 67999999999999874
No 216
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.97 E-value=5.2e-31 Score=245.18 Aligned_cols=224 Identities=25% Similarity=0.393 Sum_probs=172.2
Q ss_pred CCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
.+|+..+.||+|+||.||+|.+. +..+|+|.+..... ....|.+|++++++++|||++++++++.. ....++||||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTE-RSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEcc-CCceEEEEEcC
Confidence 46778899999999999999887 88899999875422 23578899999999999999999999876 66789999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM 271 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 271 (409)
++|+|.+++... ...+++..+..++.|++.||+||| +.+++|+||||+||+++.++.+||+|||+++........
T Consensus 82 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 156 (256)
T cd05112 82 EHGCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156 (256)
T ss_pred CCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence 999999998642 245899999999999999999999 889999999999999999999999999998765332211
Q ss_pred e--------eccccc---cCCCcHHHHHHhhhccCcHHHHh----------------hHHhhh-cCCCCHHHHHHHHHHH
Q 048535 272 S--------GRRPIE---EGKRNLVDRMWSLTERSELLSVL----------------DERLKA-KGGYADEVVEKVLHLG 323 (409)
Q Consensus 272 ~--------g~~p~~---~~~~~~~~~vws~~~~~~~~~~~----------------~~~l~~-~~~~~~~~~~~l~~l~ 323 (409)
+ +..+.+ ...++..+|+|+++. .+++++ ...... ....+......+.+++
T Consensus 157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~--~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 234 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGV--LMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELM 234 (256)
T ss_pred ccCCCccchhhcCHhHhccCCcChHHHHHHHHH--HHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHH
Confidence 0 111111 244566789998741 112211 111000 0011222356789999
Q ss_pred HHccCcCCCCCCCHHHHHHHHh
Q 048535 324 LLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 324 ~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
.+||+.+|++|||+.++++.|.
T Consensus 235 ~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 235 QHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHHcccChhhCCCHHHHHHhhC
Confidence 9999999999999999999873
No 217
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.97 E-value=4.4e-31 Score=255.45 Aligned_cols=167 Identities=23% Similarity=0.335 Sum_probs=137.4
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||+|... ++.||+|+++.. .....+.+.+|+.++.++ +||||+++++++.. .+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~ 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT-TSRLFLVIEYVN 79 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-CCEEEEEEeCCC
Confidence 46999999999999987 789999999754 233456788999999888 69999999998876 678999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC-Cc--
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH-GQ-- 269 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~~-- 269 (409)
+|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.... ..
T Consensus 80 ~~~L~~~~~~---~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (327)
T cd05617 80 GGDLMFHMQR---QRKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTT 153 (327)
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCce
Confidence 9999998853 346999999999999999999999 89999999999999999999999999999975321 11
Q ss_pred -eeeecccc------ccCCCcHHHHHHhhh
Q 048535 270 -VMSGRRPI------EEGKRNLVDRMWSLT 292 (409)
Q Consensus 270 -~~~g~~p~------~~~~~~~~~~vws~~ 292 (409)
...|...+ ....++..+|+|+++
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 183 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALG 183 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhH
Confidence 12233222 124566788999985
No 218
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.97 E-value=6.2e-31 Score=247.03 Aligned_cols=228 Identities=25% Similarity=0.470 Sum_probs=171.2
Q ss_pred CCccceeecCCceEEEEEEEC-----CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCC-----
Q 048535 115 FSEENVIGLGGNGKVYKGQLL-----GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE----- 182 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----- 182 (409)
|.+.+.||+|+||.||+|.+. +..||||++... .....+++.+|+.++++++||||+++++++.....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566789999999999999864 578999998754 34556789999999999999999999998864221
Q ss_pred eEEEEEEeCCCCCHHHHHhcC---CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecc
Q 048535 183 SLILIYDYMENGSLDKWIFEC---DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDF 259 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DF 259 (409)
..++++||+++|+|.+++... .....+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 247899999999999887532 12235889999999999999999999 889999999999999999999999999
Q ss_pred cCcccccCCcee-e---eccc-----c---ccCCCcHHHHHHhhhccCcHHHHhh----------------HHhhh-cCC
Q 048535 260 GLAKMHHHGQVM-S---GRRP-----I---EEGKRNLVDRMWSLTERSELLSVLD----------------ERLKA-KGG 310 (409)
Q Consensus 260 Gla~~~~~~~~~-~---g~~p-----~---~~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~~-~~~ 310 (409)
|+++........ . ...+ . .....+..+|+|+++ ..+++++. ..... ...
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG--~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 235 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFG--VTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLK 235 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHH--HHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCC
Confidence 999865432211 0 0001 1 123346678999974 12222221 00000 011
Q ss_pred CCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 311 YADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 311 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
.+......+.+++.+||+.+|++|||+.++++.|+++
T Consensus 236 ~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 236 QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1223456889999999999999999999999999864
No 219
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=2.4e-31 Score=250.99 Aligned_cols=223 Identities=26% Similarity=0.384 Sum_probs=168.0
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
.++|++.+.||.|+||.||+|... +..||+|.+........+.|.+|++++++++||||+++++++.. +...++|||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 82 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY-ENKLWILIE 82 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEec-CCeEEEEee
Confidence 467888999999999999999986 88999999987766677889999999999999999999999987 778999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|.+++... ...+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~L~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 83 FCDGGALDSIMLEL--ERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred ccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 99999999998643 246999999999999999999999 8999999999999999999999999999986543221
Q ss_pred ----eeeecccc-----------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhc------------------CCCCHHHH
Q 048535 270 ----VMSGRRPI-----------EEGKRNLVDRMWSLTERSELLSVLDERLKAK------------------GGYADEVV 316 (409)
Q Consensus 270 ----~~~g~~p~-----------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~------------------~~~~~~~~ 316 (409)
...|...+ ....++..+|+|+++ ..+++++....... ...+....
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG--~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (280)
T cd06611 158 QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLG--ITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWS 235 (280)
T ss_pred cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHH--HHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCC
Confidence 11111111 112245568899874 12222222211100 01122234
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
..+.+++..||+.+|.+||++.++++
T Consensus 236 ~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 236 SSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHhc
Confidence 45666777777777777777776654
No 220
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=9.4e-31 Score=248.69 Aligned_cols=222 Identities=23% Similarity=0.324 Sum_probs=168.6
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
+.|++.+.||+|+||.||+|... +..||+|.+........+.+.+|+.++++++||||+++++.+.. ++..++||||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 90 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYW-DGKLWIMIEF 90 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe-CCeEEEEEec
Confidence 56888999999999999999986 78999999987777777889999999999999999999999887 6789999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc-
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ- 269 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~- 269 (409)
+++++|..++... ...+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 91 ~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 165 (292)
T cd06644 91 CPGGAVDAIMLEL--DRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ 165 (292)
T ss_pred CCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecccccc
Confidence 9999999887542 245899999999999999999999 8999999999999999999999999999987532211
Q ss_pred ---eeeecccc-----------ccCCCcHHHHHHhhhccCcHHHHhhHHhhh---------------c---CCCCHHHHH
Q 048535 270 ---VMSGRRPI-----------EEGKRNLVDRMWSLTERSELLSVLDERLKA---------------K---GGYADEVVE 317 (409)
Q Consensus 270 ---~~~g~~p~-----------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~---------------~---~~~~~~~~~ 317 (409)
...+...+ ....++..+|+|+++ ..+++++...... . ...+.....
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG--~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG--ITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSM 243 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHH--HHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCH
Confidence 11111111 112245678999874 1222222211110 0 011223345
Q ss_pred HHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 318 KVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 318 ~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.+.+++.+||+.||++||++.++++
T Consensus 244 ~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 244 EFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhc
Confidence 6777788888888888888877754
No 221
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.6e-31 Score=263.40 Aligned_cols=263 Identities=18% Similarity=0.190 Sum_probs=191.8
Q ss_pred hCCCCccceeecCCceEEEEEEEC----CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL----GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
..+|.+.+.||+|+||.||++... +..||+|.+... +.+.+|+++|++++||||+++++++.. ....+++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~-~~~~~lv 164 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRW-KSTVCMV 164 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEee-CCEEEEE
Confidence 457999999999999999999764 577999998643 234689999999999999999999886 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+. ++|.+++. ....+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 165 ~e~~~-~~l~~~l~---~~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 165 MPKYK-CDLFTYVD---RSGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237 (392)
T ss_pred ehhcC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence 99996 58999883 3456999999999999999999999 89999999999999999999999999999976543
Q ss_pred Cc------eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCC
Q 048535 268 GQ------VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRP 335 (409)
Q Consensus 268 ~~------~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 335 (409)
.. ...|...+ ....++...|+|+++ ..+++++.......+.........+.. +..|++..|...|
T Consensus 238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG--vil~el~~g~~pf~~~~~~~~~~~l~~-i~~~~~~~~~~~~ 314 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAG--LVLFEMSVKNVTLFGKQVKSSSSQLRS-IIRCMQVHPLEFP 314 (392)
T ss_pred ccccccccccccccCccCHhHhcCCCCCchhhHHHHH--HHHHHHHHCCCCCCCCCCCCcHHHHHH-HHHHhccCccccC
Confidence 21 11222221 124566789999997 456666655544322222223333333 4456677676655
Q ss_pred C--HHHHHHHHhcCc---CCC-CCC-------CCCcchhHHhhhcccCCCCcccccccCCCCCccccc
Q 048535 336 T--IRQVLKMLEGQT---EGT-GLE-------DEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEIN 390 (409)
Q Consensus 336 t--~~evl~~L~~~~---~~~-~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~ 390 (409)
. ...+.+.+.... ..+ ..+ .+....+++.+|+..+|.+|.+..+++.||||...+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~ 382 (392)
T PHA03207 315 QNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP 382 (392)
T ss_pred CccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence 3 222333332221 111 111 011235789999999999999999999999998654
No 222
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=6.7e-31 Score=244.97 Aligned_cols=223 Identities=25% Similarity=0.337 Sum_probs=174.3
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
.++|+..+.||+|+||.||+|... ++.+|+|.+........+.+.+|+.++++++||||+++++++.. ....+++||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~l~~e 80 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLR-RDKLWIVME 80 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEe-CCEEEEEEe
Confidence 467888999999999999999986 78899999987655567889999999999999999999999887 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++++|.+++... ...+++.++..++.|++.||.||| +.+|+|+||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 81 YCGGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred CCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence 99999999998642 246899999999999999999999 8999999999999999999999999999987654321
Q ss_pred ----eeeeccc---cc---cC---CCcHHHHHHhhhccCcHHHHhhHHhh---------------h-----cCCCCHHHH
Q 048535 270 ----VMSGRRP---IE---EG---KRNLVDRMWSLTERSELLSVLDERLK---------------A-----KGGYADEVV 316 (409)
Q Consensus 270 ----~~~g~~p---~~---~~---~~~~~~~vws~~~~~~~~~~~~~~l~---------------~-----~~~~~~~~~ 316 (409)
...+... .+ .. ..+..+|+|+++. .+++++..... . .........
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~--~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (262)
T cd06613 156 AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGI--TAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWS 233 (262)
T ss_pred hccccccCCccccCchhhcccccCCcCchhhhHHHHH--HHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhh
Confidence 1111111 11 12 4566789998731 11221111100 0 001123445
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
..+.+++.+||+.+|.+|||+.+++.
T Consensus 234 ~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 234 PVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 67899999999999999999999875
No 223
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=3.3e-31 Score=257.81 Aligned_cols=268 Identities=19% Similarity=0.280 Sum_probs=182.2
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-----
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE----- 180 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~----- 180 (409)
...++|+..+.||+|+||.||+|... ++.||||.+... .....+.+.+|+.++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 34578999999999999999999876 789999999754 223446688999999999999999999987532
Q ss_pred CCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEeccc
Q 048535 181 KESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFG 260 (409)
Q Consensus 181 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFG 260 (409)
....++++|++ +++|.+++. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVK----CQKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCc
Confidence 13578999988 779998873 245999999999999999999999 8999999999999999999999999999
Q ss_pred CcccccCCc-eeeecccc---c----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCC
Q 048535 261 LAKMHHHGQ-VMSGRRPI---E----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEAN 332 (409)
Q Consensus 261 la~~~~~~~-~~~g~~p~---~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~ 332 (409)
+++...... ...|...+ + ...++...|+|+++ ..+++++............+....+... .-...+.
T Consensus 164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG--~il~el~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~ 238 (343)
T cd07878 164 LARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG--CIMAELLKGKALFPGNDYIDQLKRIMEV---VGTPSPE 238 (343)
T ss_pred cceecCCCcCCccccccccCchHhcCCccCCchhhhHhHH--HHHHHHHHCCCCCCCCCHHHHHHHHHHH---hCCCCHH
Confidence 998754422 11122211 1 13456789999996 3455555443322111111111111111 1111100
Q ss_pred --CCCCHHHHHHHHhcCcCCCCC-------CCCCcchhHHhhhcccCCCCcccccccCCCCCccccc
Q 048535 333 --SRPTIRQVLKMLEGQTEGTGL-------EDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEIN 390 (409)
Q Consensus 333 --~RPt~~evl~~L~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~ 390 (409)
.+.+.....+.++.....+.. .......+++.+|+..+|.+|++..+++.||||....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~ 305 (343)
T cd07878 239 VLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH 305 (343)
T ss_pred HHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence 000001111111111111100 0011236899999999999999999999999998754
No 224
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=6.6e-31 Score=246.03 Aligned_cols=220 Identities=24% Similarity=0.374 Sum_probs=167.8
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCCh---------HHHHHHHHHHHHhccCCCCceeeEeeEEEccCC
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSE---------HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE 182 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~---------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 182 (409)
+|.....||+|+||.||+|... ++.||+|.+..... ...+.+.+|+.++++++||||+++++++.+ ..
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD-AD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe-CC
Confidence 3667889999999999999875 78999998864321 123568899999999999999999999887 67
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 183 SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
..+++|||+++++|.+++.. ...+++..+..++.|++.||+||| +.+++||||||+||++++++.+||+|||++
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred ccEEEEEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCC
Confidence 88999999999999999953 346899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCc----------eeeecccc---c---cCCCcHHHHHHhhhccCcHHHHhhH----------------HhhhcCC
Q 048535 263 KMHHHGQ----------VMSGRRPI---E---EGKRNLVDRMWSLTERSELLSVLDE----------------RLKAKGG 310 (409)
Q Consensus 263 ~~~~~~~----------~~~g~~p~---~---~~~~~~~~~vws~~~~~~~~~~~~~----------------~l~~~~~ 310 (409)
+...... ...|...+ + ...++..+|+|+++ ..+++++.. .......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG--~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 231 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLG--CLVVEMLTGKHPFPDCTQLQAIFKIGENASPE 231 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHH--HHHHHHhhCCCCCCCccHHHHHHHHhccCCCc
Confidence 8665211 01111111 1 13345567888873 111111111 0111123
Q ss_pred CCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 311 YADEVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 311 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.+......+.+++.+||+.||.+||++.|+++
T Consensus 232 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 232 IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 34455677889999999999999999988875
No 225
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.97 E-value=6.1e-31 Score=250.52 Aligned_cols=221 Identities=27% Similarity=0.325 Sum_probs=169.1
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCCh-----HHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSE-----HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
+|+..+.||+|+||.||+|... ++.||||.++.... .....+..|++++++++|+||+++++++.+ .+..++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-KSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-CCEEEE
Confidence 4777889999999999999986 88999999975532 234567789999999999999999999987 778999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
||||+ +|+|.+++.... ..+++..+..++.||++||.||| +.+|+|+||||+|||++.++.+||+|||+++...
T Consensus 80 v~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred EEccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 99999 899999995422 36999999999999999999999 8999999999999999999999999999998764
Q ss_pred CCce-ee---e---ccccc----cCCCcHHHHHHhhhccCcHHHHhhHH---------------hhhc------------
Q 048535 267 HGQV-MS---G---RRPIE----EGKRNLVDRMWSLTERSELLSVLDER---------------LKAK------------ 308 (409)
Q Consensus 267 ~~~~-~~---g---~~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~---------------l~~~------------ 308 (409)
.... .. + ..+.+ ...++...|+|+++. .+++++... ....
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~--il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (298)
T cd07841 154 SPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGC--IFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVT 231 (298)
T ss_pred CCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHH--HHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcc
Confidence 4310 00 0 11111 123467789998741 122221110 0000
Q ss_pred -----------CCC-----CHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 048535 309 -----------GGY-----ADEVVEKVLHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 309 -----------~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
... .......+.+++.+||+.||++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 232 SLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000 01224578899999999999999999999985
No 226
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=7.8e-31 Score=247.91 Aligned_cols=220 Identities=25% Similarity=0.355 Sum_probs=166.7
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
|++.+.||+|+||.||+|... +..+|+|.+........+.+.+|+++++.++||||+++++++.. .+..++||||++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-ENNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee-CCEEEEEEEecC
Confidence 566788999999999999987 78899999977666677889999999999999999999999987 678999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--- 269 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--- 269 (409)
+|+|..++.. ....+++..+..++.|+++||.||| +.+++||||||+|||++.++.+||+|||++.......
T Consensus 86 ~~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~ 160 (282)
T cd06643 86 GGAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR 160 (282)
T ss_pred CCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccccccccccccc
Confidence 9999998854 2346899999999999999999999 8999999999999999999999999999987543211
Q ss_pred -eeeecccc-----------ccCCCcHHHHHHhhhccCcHHHHhh---------------HHhhh---cCCCCHHHHHHH
Q 048535 270 -VMSGRRPI-----------EEGKRNLVDRMWSLTERSELLSVLD---------------ERLKA---KGGYADEVVEKV 319 (409)
Q Consensus 270 -~~~g~~p~-----------~~~~~~~~~~vws~~~~~~~~~~~~---------------~~l~~---~~~~~~~~~~~l 319 (409)
...+...+ ....++..+|+|+++ ..+++++. ..... ....+......+
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG--vil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (282)
T cd06643 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG--ITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEF 238 (282)
T ss_pred ccccccccccCHhhccccCCCCCCCCccchhhhHH--HHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHH
Confidence 11111111 112244568888873 11111111 11110 011122344567
Q ss_pred HHHHHHccCcCCCCCCCHHHHHH
Q 048535 320 LHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 320 ~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.+++.+||+.||.+|||+.++++
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 239 KDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred HHHHHHHccCChhhCcCHHHHhc
Confidence 88888888888888888887764
No 227
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=3.7e-31 Score=250.40 Aligned_cols=235 Identities=21% Similarity=0.268 Sum_probs=175.2
Q ss_pred ccHHHHHHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEEc
Q 048535 103 VSYQEIHAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKK 179 (409)
Q Consensus 103 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 179 (409)
+.++.+..++++|++.+.||+|+||.||++... ++.+|+|.+.... .....+.+|+.+++++ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 456677778899999999999999999999886 7899999986432 2235688899999999 79999999998852
Q ss_pred ----cCCeEEEEEEeCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcE
Q 048535 180 ----EKESLILIYDYMENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNA 254 (409)
Q Consensus 180 ----~~~~~~lv~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~ 254 (409)
.++..++||||+++|+|.+++... .....+++..+..++.|+++||.||| +.+|+||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCE
Confidence 245689999999999999988642 23346899999999999999999999 8999999999999999999999
Q ss_pred EEecccCcccccCCc----eeeeccc---cc--------cCCCcHHHHHHhhhccCcHHHHhhHHhh-------------
Q 048535 255 RLGDFGLAKMHHHGQ----VMSGRRP---IE--------EGKRNLVDRMWSLTERSELLSVLDERLK------------- 306 (409)
Q Consensus 255 kl~DFGla~~~~~~~----~~~g~~p---~~--------~~~~~~~~~vws~~~~~~~~~~~~~~l~------------- 306 (409)
||+|||+++...... ...|... .+ ...++..+|+|+++. .++++......
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv--i~~el~~g~~p~~~~~~~~~~~~~ 241 (286)
T cd06638 164 KLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGI--TAIELGDGDPPLADLHPMRALFKI 241 (286)
T ss_pred EEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHH--HHHHHhcCCCCCCCCchhHHHhhc
Confidence 999999997654321 1112111 11 122456788888731 11111111100
Q ss_pred --hc---CCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 048535 307 --AK---GGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 307 --~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
.. ...+......+.+++.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 242 PRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred cccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 00 00111234568899999999999999999999874
No 228
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=7.3e-31 Score=244.59 Aligned_cols=228 Identities=24% Similarity=0.353 Sum_probs=174.8
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCeEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KESLILIY 188 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~~lv~ 188 (409)
+|+..+.||.|+||.||++... +..||+|.+... .....+.+.+|+.++++++||||+++++++... ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4778899999999999999886 789999998654 344567789999999999999999999987642 45689999
Q ss_pred EeCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 189 DYMENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGW--ESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 189 E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
||+++++|.+++... .....+++..++.++.|++.||.|||..+ +.+++|+||||+||+++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998653 22457999999999999999999999554 678999999999999999999999999999876
Q ss_pred cCCce----eeecc---c---cccCCCcHHHHHHhhhccCcHHHHhhH---------------Hhhh-cCCCCHHHHHHH
Q 048535 266 HHGQV----MSGRR---P---IEEGKRNLVDRMWSLTERSELLSVLDE---------------RLKA-KGGYADEVVEKV 319 (409)
Q Consensus 266 ~~~~~----~~g~~---p---~~~~~~~~~~~vws~~~~~~~~~~~~~---------------~l~~-~~~~~~~~~~~l 319 (409)
..... ..|.. + ......+...|+|+++. .+++++.. .... ....+......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~--il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGC--LIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSEL 238 (265)
T ss_pred cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHH--HHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHH
Confidence 54331 11111 1 11234566789998731 11111111 1110 122344556788
Q ss_pred HHHHHHccCcCCCCCCCHHHHHHH
Q 048535 320 LHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 320 ~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
.+++.+|++.+|++|||+.+|++.
T Consensus 239 ~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 239 NEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHHHccCCcccCCCHHHHhhC
Confidence 999999999999999999999864
No 229
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=1.9e-30 Score=254.22 Aligned_cols=266 Identities=18% Similarity=0.234 Sum_probs=180.8
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC-----
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK----- 181 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----- 181 (409)
..++|+..+.||+|+||.||++... |..||+|.+... .......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999886 899999999643 3344567889999999999999999999886422
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccC
Q 048535 182 ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGL 261 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 261 (409)
...|+||||+++ +|.+.+. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCC
Confidence 357999999976 6777663 24788999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCcee---eecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCC---------------HHHHH
Q 048535 262 AKMHHHGQVM---SGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYA---------------DEVVE 317 (409)
Q Consensus 262 a~~~~~~~~~---~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~---------------~~~~~ 317 (409)
++........ .|...+ ....++...|+|+++ ..+++++.......+... .+...
T Consensus 170 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG--~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 170 ARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG--CIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred ccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHH--HHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 9765332211 111111 123456678999986 345555554433222111 11111
Q ss_pred HHHHHHHHccCcCCCCCC-CHHHHHHHHhc--CcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCccc
Q 048535 318 KVLHLGLLCAHPEANSRP-TIRQVLKMLEG--QTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNE 388 (409)
Q Consensus 318 ~l~~l~~~Cl~~dP~~RP-t~~evl~~L~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~ 388 (409)
.+...........|..+. +..++...... ...... .......+++.+|+..+|.+|++.++++.|||+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDK-LKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhcccccccccccccc-ccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 111111112222222111 11111110000 000000 00122379999999999999999999999999874
No 230
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=4.6e-31 Score=247.76 Aligned_cols=226 Identities=24% Similarity=0.366 Sum_probs=166.6
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEEcc-----C
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKE-----K 181 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~-----~ 181 (409)
.+++.|+..+.||+|+||.||+|... ++.||+|.+.... .....+.+|+.++.++ +|+||+++++++... .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45677888999999999999999886 7899999986543 3345788999999998 799999999998752 2
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccC
Q 048535 182 ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGL 261 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 261 (409)
...+++|||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCC
Confidence 4589999999999999998653 2346899999999999999999999 78999999999999999999999999999
Q ss_pred cccccCCc----eeeecc---ccc--------cCCCcHHHHHHhhhccCcHHHHhhHHhhhc-----------------C
Q 048535 262 AKMHHHGQ----VMSGRR---PIE--------EGKRNLVDRMWSLTERSELLSVLDERLKAK-----------------G 309 (409)
Q Consensus 262 a~~~~~~~----~~~g~~---p~~--------~~~~~~~~~vws~~~~~~~~~~~~~~l~~~-----------------~ 309 (409)
++...... ...|.. +.+ ...++...|+|+++ ..+++++....... .
T Consensus 158 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG--v~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 235 (272)
T cd06637 158 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG--ITAIEMAEGAPPLCDMHPMRALFLIPRNPAPR 235 (272)
T ss_pred ceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHH--HHHHHHHhCCCCccccCHHHHHHHHhcCCCCC
Confidence 97653221 111211 111 12355678999874 22233322211100 0
Q ss_pred CCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 310 GYADEVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 310 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
......+..+.+++.+||+.||.+|||+.++++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 236 LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 011123346677777777777777777777754
No 231
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.97 E-value=4.8e-31 Score=277.58 Aligned_cols=230 Identities=20% Similarity=0.252 Sum_probs=175.1
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|++.+.||+|+||.||+|... ++.||+|+++.. .....++|.+|++++++++||||+++++++.+ ++..++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d-~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD-GDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-CCEEEEE
Confidence 57889999999999999999986 899999999754 23345679999999999999999999999987 6789999
Q ss_pred EEeCCCCCHHHHHhcCC--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecc
Q 048535 188 YDYMENGSLDKWIFECD--------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDF 259 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DF 259 (409)
|||+++|+|.+++.... ....+++..+++++.||++||+||| +.+|+||||||+|||++.++.+||+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEec
Confidence 99999999999986421 1234677888999999999999999 899999999999999999999999999
Q ss_pred cCcccccCCc----------------------eeeeccccc------cCCCcHHHHHHhhhccCcHHHHhhHHhhhcC--
Q 048535 260 GLAKMHHHGQ----------------------VMSGRRPIE------EGKRNLVDRMWSLTERSELLSVLDERLKAKG-- 309 (409)
Q Consensus 260 Gla~~~~~~~----------------------~~~g~~p~~------~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~-- 309 (409)
|+++...... ...|...+. ...++..+|+|+++ ..+++++....+...
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLG--VILyELLTG~~PF~~~~ 235 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALG--VILYQMLTLSFPYRRKK 235 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHH--HHHHHHHHCCCCCCCcc
Confidence 9998652110 011222221 24467788999985 233333332211100
Q ss_pred --------------C--CCHHHHHHHHHHHHHccCcCCCCCC-CHHHHHHHHhcCc
Q 048535 310 --------------G--YADEVVEKVLHLGLLCAHPEANSRP-TIRQVLKMLEGQT 348 (409)
Q Consensus 310 --------------~--~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~evl~~L~~~~ 348 (409)
. .....+..+.+++.+|++.||++|| +++++.+.|+...
T Consensus 236 ~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 236 GRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred hhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0 0113345688999999999999996 5677777776543
No 232
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97 E-value=1.8e-31 Score=257.88 Aligned_cols=219 Identities=21% Similarity=0.251 Sum_probs=162.6
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHH-HhccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVS-SLGRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||+|... |+.||+|++... .......+..|.. +++.++||||+++++++.. .+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~-~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-TEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-CCEEEEEEcCCC
Confidence 46999999999999986 899999999654 2233455666665 4677899999999999887 778999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC----
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG---- 268 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~---- 268 (409)
+|+|..++.. ...+++..+..++.||+.||.||| +.+|+||||||+|||+++++.+||+|||+++.....
T Consensus 80 ~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~ 153 (325)
T cd05604 80 GGELFFHLQR---ERSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTT 153 (325)
T ss_pred CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCc
Confidence 9999998853 346899999999999999999999 899999999999999999999999999998753211
Q ss_pred ceeeecccc------ccCCCcHHHHHHhhhcc-------------CcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCc
Q 048535 269 QVMSGRRPI------EEGKRNLVDRMWSLTER-------------SELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHP 329 (409)
Q Consensus 269 ~~~~g~~p~------~~~~~~~~~~vws~~~~-------------~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~ 329 (409)
....|...+ ....++...|+|+++.. ....++.+..+.............+.+++.+|++.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~ 233 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEK 233 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhcc
Confidence 112222221 12345667889987411 11222222222211222233456678899999999
Q ss_pred CCCCCCCHHHHHHHH
Q 048535 330 EANSRPTIRQVLKML 344 (409)
Q Consensus 330 dP~~RPt~~evl~~L 344 (409)
||.+||++++.++.+
T Consensus 234 ~p~~R~~~~~~~~~i 248 (325)
T cd05604 234 DRQRRLGAKEDFLEI 248 (325)
T ss_pred CHHhcCCCCCCHHHH
Confidence 999999987544443
No 233
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=5.5e-31 Score=249.65 Aligned_cols=217 Identities=22% Similarity=0.318 Sum_probs=163.1
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
|+..+.||+|+||+||+|... ++.||+|.+.... ......+.+|++++++++|+||+++.+.+.. ++..+++||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET-KDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec-CCEEEEEEE
Confidence 667789999999999999986 8899999986542 2234567889999999999999999998887 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 81 IMNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred eccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 99999999988643 2346999999999999999999999 8999999999999999999999999999997653322
Q ss_pred e---eeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhh-------------------cCCCCHHHHHHHHH
Q 048535 270 V---MSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKA-------------------KGGYADEVVEKVLH 321 (409)
Q Consensus 270 ~---~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~-------------------~~~~~~~~~~~l~~ 321 (409)
. ..|...+ ....++...|+|+++ ..+++++...... ...++......+.+
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG--~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLG--CLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKS 234 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHH--HHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHH
Confidence 1 1111111 123456667888873 1122222211110 11223334556778
Q ss_pred HHHHccCcCCCCCCCHH
Q 048535 322 LGLLCAHPEANSRPTIR 338 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt~~ 338 (409)
++..||+.||++||++.
T Consensus 235 li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 235 ICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred HHHHHccCCHhHcCCCc
Confidence 88888888888888843
No 234
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.97 E-value=4.1e-31 Score=247.71 Aligned_cols=222 Identities=26% Similarity=0.450 Sum_probs=169.1
Q ss_pred ceeecCCceEEEEEEEC--C------cEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 119 NVIGLGGNGKVYKGQLL--G------VEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~------~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+.||+|+||.||+|+.. . ..+|+|.+.... ......+.+|+.+++.++||||+++++++.. ....++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL-NEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC-CCCeEEEEe
Confidence 36899999999999875 2 579999986542 3456789999999999999999999999987 667899999
Q ss_pred eCCCCCHHHHHhcCC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC-----cEEEeccc
Q 048535 190 YMENGSLDKWIFECD----ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM-----NARLGDFG 260 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~-----~~kl~DFG 260 (409)
|+++|+|.+++.... ....+++.+++.++.|++.||.||| +.+++|+||||+||+++.+. .+||+|||
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 999999999996531 2235889999999999999999999 88999999999999999877 89999999
Q ss_pred CcccccCCcee---------eecccc---ccCCCcHHHHHHhhhccCcHHHHhh-HHh--------------h--hcCCC
Q 048535 261 LAKMHHHGQVM---------SGRRPI---EEGKRNLVDRMWSLTERSELLSVLD-ERL--------------K--AKGGY 311 (409)
Q Consensus 261 la~~~~~~~~~---------~g~~p~---~~~~~~~~~~vws~~~~~~~~~~~~-~~l--------------~--~~~~~ 311 (409)
+++........ ....+. .....+...|+|+++ ..+++++. ... . .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG--~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05044 157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFG--VLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQK 234 (269)
T ss_pred cccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHH--HHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCC
Confidence 99765332211 011111 124456678888874 12222221 100 0 00122
Q ss_pred CHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 312 ADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 312 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
+...+..+.+++.+||+.+|.+||++.++++.|++
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 235 PENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred cccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 34456788999999999999999999999999864
No 235
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=4.8e-31 Score=247.12 Aligned_cols=221 Identities=24% Similarity=0.342 Sum_probs=168.6
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
++|+..+.||+|+||.||+|... ++.||+|.++.........+.+|+.+++.++||||+++++.+.. .+..++||||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~-~~~~~lv~e~ 87 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLR-RDKLWICMEF 87 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEe-CCEEEEEEec
Confidence 46777889999999999999886 88999999987655556678899999999999999999999887 7789999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc-
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ- 269 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~- 269 (409)
+++|+|.+++.. ...+++.++..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 88 CGGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA 161 (267)
T ss_pred cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc
Confidence 999999999853 346899999999999999999999 8899999999999999999999999999987543211
Q ss_pred ---eeeeccc---cc------cCCCcHHHHHHhhhccCcHHHHhhHHhhh------------------cCCC--CHHHHH
Q 048535 270 ---VMSGRRP---IE------EGKRNLVDRMWSLTERSELLSVLDERLKA------------------KGGY--ADEVVE 317 (409)
Q Consensus 270 ---~~~g~~p---~~------~~~~~~~~~vws~~~~~~~~~~~~~~l~~------------------~~~~--~~~~~~ 317 (409)
...|... .+ ...++..+|+|+++ ..++++....... .... ......
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG--~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVG--ITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSN 239 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHH--HHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCH
Confidence 1112211 11 22355678999974 1222221111100 0000 012234
Q ss_pred HHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 318 KVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 318 ~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.+.+++.+||+.+|++|||+.++++
T Consensus 240 ~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 240 SFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHHHHHHHHccCCchhCcCHHHHhc
Confidence 5778888999999999999888865
No 236
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=2.5e-31 Score=251.69 Aligned_cols=224 Identities=22% Similarity=0.374 Sum_probs=170.8
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
++|+..+.||+|+||+||++... ++.||+|.+... .....+.+.+|+++++.++||||+++++++.. ....++|||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 83 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLN-ENNICMCME 83 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEec-CCEEEEEEe
Confidence 46777899999999999999987 889999998654 34456789999999999999999999999987 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|.+++.. ...+++.....++.|++.||.|||+ ..+++||||||+||++++++.++|+|||++.......
T Consensus 84 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 84 FMDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred cCCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc
Confidence 9999999999854 3468999999999999999999994 3689999999999999999999999999987543211
Q ss_pred --eeeecccc------ccCCCcHHHHHHhhhccCcHHHHh--------------------------hHHhhh-cCCCC-H
Q 048535 270 --VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVL--------------------------DERLKA-KGGYA-D 313 (409)
Q Consensus 270 --~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~--------------------------~~~l~~-~~~~~-~ 313 (409)
...|...+ .....+...|+|+++. .+++++ ...... ....+ .
T Consensus 159 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~--~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd06620 159 ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGI--SIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSS 236 (284)
T ss_pred cCccccCcccCCHHHHccCCCCccchHHHHHH--HHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCch
Confidence 11222211 1234456788888731 122222 111110 01111 1
Q ss_pred HHHHHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 048535 314 EVVEKVLHLGLLCAHPEANSRPTIRQVLKML 344 (409)
Q Consensus 314 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 344 (409)
.....+.+++.+||+.||++|||+.|++++.
T Consensus 237 ~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 237 DFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 2455788899999999999999999998763
No 237
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-31 Score=263.05 Aligned_cols=218 Identities=22% Similarity=0.298 Sum_probs=172.1
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeE
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESL 184 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 184 (409)
..++|...++||+|.||.|+++..+ ++.+|||.++++ ...+.+..+.|.+++... +||.+++++..|.. .+++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT-~~~l 444 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT-KEHL 444 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc-CCeE
Confidence 4478999999999999999999998 788999999877 445667788899998877 69999999998877 8899
Q ss_pred EEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 185 ILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
|.||||+.||++..+. ....+++..+.-+++.|+.||+||| +++||+||||.+|||||.+|.+||+||||++.
T Consensus 445 ~fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccc
Confidence 9999999999965544 3357999999999999999999999 89999999999999999999999999999986
Q ss_pred cc-C---Cceeeeccccc------cCCCcHHHHHHhhh-------------ccCcHHHHhhHHhhhcCCCCHHHHHHHHH
Q 048535 265 HH-H---GQVMSGRRPIE------EGKRNLVDRMWSLT-------------ERSELLSVLDERLKAKGGYADEVVEKVLH 321 (409)
Q Consensus 265 ~~-~---~~~~~g~~p~~------~~~~~~~~~vws~~-------------~~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 321 (409)
.- . ....+|.+-+. ...|+...|.|+++ ...+-.++.|..+.....+|...+.+...
T Consensus 518 ~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~ 597 (694)
T KOG0694|consen 518 GMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIA 597 (694)
T ss_pred cCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHH
Confidence 43 1 22566766543 36788889999984 12233344444444444455555556666
Q ss_pred HHHHccCcCCCCCCC
Q 048535 322 LGLLCAHPEANSRPT 336 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt 336 (409)
++.+.+..||++|--
T Consensus 598 il~~ll~k~p~kRLG 612 (694)
T KOG0694|consen 598 IMRRLLRKNPEKRLG 612 (694)
T ss_pred HHHHHhccCcccccC
Confidence 666666666666643
No 238
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.97 E-value=3.3e-31 Score=256.00 Aligned_cols=221 Identities=21% Similarity=0.258 Sum_probs=162.5
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHH-HhccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVS-SLGRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||+|... ++.||+|++.... ......+..|.. +++.++||||+++++++.. .+..++||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~-~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-ADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc-CCeEEEEEeCCC
Confidence 46999999999999987 7889999997532 222334555554 5678899999999999887 678999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--- 269 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--- 269 (409)
+|+|.+++.. ...+++..+..++.||++||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~ 153 (325)
T cd05602 80 GGELFYHLQR---ERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTT 153 (325)
T ss_pred CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCc
Confidence 9999999953 345888899999999999999999 8999999999999999999999999999997532211
Q ss_pred -eeeeccccc------cCCCcHHHHHHhhhc-------------cCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCc
Q 048535 270 -VMSGRRPIE------EGKRNLVDRMWSLTE-------------RSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHP 329 (409)
Q Consensus 270 -~~~g~~p~~------~~~~~~~~~vws~~~-------------~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~ 329 (409)
...|...+. ...++...|+|+++. .....+..+................+.+++.+|++.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~ 233 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQK 233 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHccc
Confidence 122222221 234556778888731 111122222222222233344566789999999999
Q ss_pred CCCCCCCHHHHHHHHhc
Q 048535 330 EANSRPTIRQVLKMLEG 346 (409)
Q Consensus 330 dP~~RPt~~evl~~L~~ 346 (409)
||.+||++.+.+..+.+
T Consensus 234 ~p~~R~~~~~~~~~i~~ 250 (325)
T cd05602 234 DRTKRLGAKDDFMEIKN 250 (325)
T ss_pred CHHHCCCCCCCHHHHhc
Confidence 99999998865554443
No 239
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=2e-30 Score=254.55 Aligned_cols=263 Identities=19% Similarity=0.239 Sum_probs=181.6
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-----C
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-----K 181 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~ 181 (409)
..++|+..+.||+|+||.||++... ++.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999986 889999999753 334456788999999999999999999987542 2
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccC
Q 048535 182 ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGL 261 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 261 (409)
...|+||||+++ +|.+++. ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 357999999975 7887773 24789999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCcee---eecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCC---------------HHHHH
Q 048535 262 AKMHHHGQVM---SGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYA---------------DEVVE 317 (409)
Q Consensus 262 a~~~~~~~~~---~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~---------------~~~~~ 317 (409)
++........ .|...+ ....++...|+|+++ ..+++++........... .+...
T Consensus 173 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG--~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG--CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred ccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHH--HHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9875443211 122111 124456789999986 345555544433221111 11111
Q ss_pred HHHHHHHHccCcCCCCCCCHH-----HHHHHHh-cCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCccc
Q 048535 318 KVLHLGLLCAHPEANSRPTIR-----QVLKMLE-GQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNE 388 (409)
Q Consensus 318 ~l~~l~~~Cl~~dP~~RPt~~-----evl~~L~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~ 388 (409)
.+...+.... .+||... ++..... ...............+++.+|+..+|.+|+++.+++.||||..
T Consensus 251 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 251 KLQPTVRTYV----ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred hhhHHHHHHH----hhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 1111111111 2222221 1110000 0000000001122378999999999999999999999999975
No 240
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97 E-value=6.3e-31 Score=258.67 Aligned_cols=191 Identities=20% Similarity=0.200 Sum_probs=152.9
Q ss_pred HHHHHHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEc
Q 048535 105 YQEIHAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKK 179 (409)
Q Consensus 105 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 179 (409)
+.++....++|+..+.||+|+||.||++... ++.||+|.+... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4455566789999999999999999999987 789999998642 22334568899999999999999999999887
Q ss_pred cCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecc
Q 048535 180 EKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDF 259 (409)
Q Consensus 180 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DF 259 (409)
....++||||+++|+|.+++.. ..+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+||
T Consensus 115 -~~~~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~Df 186 (371)
T cd05622 115 -DRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADF 186 (371)
T ss_pred -CCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeC
Confidence 7789999999999999999853 34888899999999999999999 899999999999999999999999999
Q ss_pred cCcccccCCc-----eeeecccccc----------CCCcHHHHHHhhhccCcHHHHhhHHh
Q 048535 260 GLAKMHHHGQ-----VMSGRRPIEE----------GKRNLVDRMWSLTERSELLSVLDERL 305 (409)
Q Consensus 260 Gla~~~~~~~-----~~~g~~p~~~----------~~~~~~~~vws~~~~~~~~~~~~~~l 305 (409)
|+++...... ...|...+.. ..++...|+|+++ ..+++++....
T Consensus 187 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlG--vilyell~G~~ 245 (371)
T cd05622 187 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG--VFLYEMLVGDT 245 (371)
T ss_pred CceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehh--HHHHHHHhCCC
Confidence 9998654322 1123222211 1255678999986 34555554433
No 241
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=3.9e-31 Score=254.28 Aligned_cols=261 Identities=21% Similarity=0.297 Sum_probs=172.6
Q ss_pred cceeecCCceEEEEEEEC----CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCeEEEEEEeCC
Q 048535 118 ENVIGLGGNGKVYKGQLL----GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KESLILIYDYME 192 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~~lv~E~~~ 192 (409)
.++||+|+||.||+|... ++.||+|.+.... ....+.+|+.++++++||||+++++++... ....+++|||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999864 5789999986542 224577899999999999999999988642 456889999996
Q ss_pred CCCHHHHHhcCC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeee----CCCCcEEEecccCc
Q 048535 193 NGSLDKWIFECD------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLL----DKKMNARLGDFGLA 262 (409)
Q Consensus 193 ~gsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----~~~~~~kl~DFGla 262 (409)
+ +|.+++.... ....+++..+..++.||+.||.||| +.+|+||||||+|||+ +.++.+||+|||+|
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 5 8988875321 2235899999999999999999999 8999999999999999 45678999999999
Q ss_pred ccccCCc-------eeeec---cccc---c-CCCcHHHHHHhhhccCcHHHHhhHHhhhcCC---------CCHHHHHHH
Q 048535 263 KMHHHGQ-------VMSGR---RPIE---E-GKRNLVDRMWSLTERSELLSVLDERLKAKGG---------YADEVVEKV 319 (409)
Q Consensus 263 ~~~~~~~-------~~~g~---~p~~---~-~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~---------~~~~~~~~l 319 (409)
+...... ...|. .+.+ . ..++...|+|+++ ..+++++......... ........+
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG--~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 237 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIG--CIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 237 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHH--HHHHHHHhCCCCccCCcccccccccccHHHHHHH
Confidence 8754321 11111 1222 1 3356789999986 3455555443321110 111222222
Q ss_pred HHHHHHccCcCCCCC---CCHHHHHHHHhcC----------cCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 320 LHLGLLCAHPEANSR---PTIRQVLKMLEGQ----------TEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 320 ~~l~~~Cl~~dP~~R---Pt~~evl~~L~~~----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
..+...+...+.... |......+.+... .+......+....+++.+|+..||.+|+|+++++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 238 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 222211111111111 1111111111110 001111122235799999999999999999999999998
No 242
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=1.4e-30 Score=250.29 Aligned_cols=149 Identities=28% Similarity=0.339 Sum_probs=132.4
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCCh---HHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSE---HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|+..+.||+|+||.||+|... ++.||+|.+..... ...+.+..|+++++.++||||+++++.+.. ....++|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT-ETYLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec-CCEEEEE
Confidence 46888899999999999999986 79999999976522 345678999999999999999999999887 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
|||+.+++|.+++... ....+++..+..++.|+++||+||| +.+++|+||||+||+++.++.++|+|||++....
T Consensus 80 ~e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 80 MDYCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSD 154 (316)
T ss_pred EEecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence 9999999999998642 3356899999999999999999999 8999999999999999999999999999987543
No 243
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=1.2e-30 Score=242.45 Aligned_cols=221 Identities=24% Similarity=0.351 Sum_probs=172.2
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
.++|+..+.||+|+||.||+|... +..+|+|.++.... .+++.+|++++++++||||+++++++.. ....++++|
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~l~~e 78 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFK-NTDLWIVME 78 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeec-CCcEEEEEe
Confidence 367888999999999999999987 78999999975433 6789999999999999999999999987 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++++|.+++... ...+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||++.......
T Consensus 79 ~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 79 YCGAGSVSDIMKIT--NKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred cCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCc
Confidence 99999999998542 346899999999999999999999 8899999999999999999999999999998654322
Q ss_pred ----eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhh------------------cCCCCHHHHHHHHH
Q 048535 270 ----VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKA------------------KGGYADEVVEKVLH 321 (409)
Q Consensus 270 ----~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~------------------~~~~~~~~~~~l~~ 321 (409)
...|...+ ....++...|+|+++ ..+++++...... ....+......+.+
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G--~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLG--ITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFND 231 (256)
T ss_pred cccccccCCccccCHHHHhcCCCCchhhHHHHH--HHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHH
Confidence 11111111 123445678999874 1222222211110 00112234457888
Q ss_pred HHHHccCcCCCCCCCHHHHHH
Q 048535 322 LGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt~~evl~ 342 (409)
++.+||+.||++|||+.|+++
T Consensus 232 ~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 232 FVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHHHHHhcChhhCcCHHHHhc
Confidence 999999999999999998875
No 244
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=1e-30 Score=252.82 Aligned_cols=142 Identities=22% Similarity=0.235 Sum_probs=124.2
Q ss_pred ccceeecC--CceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 117 EENVIGLG--GNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 117 ~~~~lG~G--~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
..++||+| +||+||++... |+.||+|+++.. .....+.+.+|+++++.++||||+++++++.. ++..++||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-CCEEEEEEec
Confidence 35789999 78999999887 899999999754 23344567789999999999999999999987 6789999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcc
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAK 263 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 263 (409)
+++|+|.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.++++|||.+.
T Consensus 81 ~~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 81 MAYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred cCCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhh
Confidence 99999999996432 235899999999999999999999 8999999999999999999999999998654
No 245
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=5.3e-31 Score=249.87 Aligned_cols=173 Identities=25% Similarity=0.396 Sum_probs=141.1
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
|+..+.||+|+||.||++... ++.||+|.+.... ......+.+|+.++++++|+||+++++.+.+ .+..++|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET-KDALCLVLT 80 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec-CCEEEEEEE
Confidence 677789999999999999987 8899999986542 2234567889999999999999999999887 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 81 LMNGGDLKFHIYHM-GEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred ecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 99999999998643 2345899999999999999999999 8999999999999999999999999999997654322
Q ss_pred ee---eecccc------ccCCCcHHHHHHhhh
Q 048535 270 VM---SGRRPI------EEGKRNLVDRMWSLT 292 (409)
Q Consensus 270 ~~---~g~~p~------~~~~~~~~~~vws~~ 292 (409)
.. .|...+ ....++...|+|+++
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG 188 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALG 188 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHH
Confidence 11 111111 123456678899885
No 246
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=2e-30 Score=247.55 Aligned_cols=265 Identities=23% Similarity=0.331 Sum_probs=185.8
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
++|...+.||+|+||.||+|... ++.||+|.++... ......+.+|+.++++++||||+++++++.. ....++|||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-~~~~~lv~e 84 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-EKSLTLVFE 84 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEec-CCeEEEEEe
Confidence 56888999999999999999886 7899999997542 2334567889999999999999999999987 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|++ ++|.+++... ...+++..+..++.|+++||.||| +.+|+|+||||+|||+++++.+||+|||+++......
T Consensus 85 ~~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 85 YLD-KDLKQYLDDC--GNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred ccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 997 5999988643 345889999999999999999999 8999999999999999999999999999997643221
Q ss_pred e-------eeeccccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCC-CCCH
Q 048535 270 V-------MSGRRPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANS-RPTI 337 (409)
Q Consensus 270 ~-------~~g~~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~-RPt~ 337 (409)
. .....+.+ ...++..+|+|+++ ..+++++............ +....+..++...+.. .|.+
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG--~~l~el~tg~~~f~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVG--CIFYEMSTGRPLFPGSTVE----EQLHFIFRILGTPTEETWPGI 232 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHH--HHHHHHHhCCCCCCCCCHH----HHHHHHHHHcCCCChhhchhh
Confidence 0 01111111 12356788999996 4556666654432222112 2222223332222111 1111
Q ss_pred HHHHHHHhcCcCCCC----------CCCCCcchhHHhhhcccCCCCcccccccCCCCCccccccc
Q 048535 338 RQVLKMLEGQTEGTG----------LEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINKN 392 (409)
Q Consensus 338 ~evl~~L~~~~~~~~----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~~ 392 (409)
..-.. ... ...+. ..-+....+++.+|+..+|.+|+++++++.||||......
T Consensus 233 ~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~ 295 (301)
T cd07873 233 LSNEE-FKS-YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGER 295 (301)
T ss_pred hcccc-ccc-cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccch
Confidence 00000 000 00000 0011123689999999999999999999999999877643
No 247
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=8.9e-31 Score=249.72 Aligned_cols=220 Identities=23% Similarity=0.359 Sum_probs=171.7
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
++|+..+.||.|+||.||+|... ++.||+|.+........+.+.+|+.+++.++||||+++++++.. ....++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLV-GDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEec-CceEEEEEEe
Confidence 56888999999999999999875 89999999976655556788999999999999999999999987 6789999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV 270 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 270 (409)
+++|+|.+++.. ..+++.++..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++........
T Consensus 98 ~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 98 LAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred cCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 999999999843 35899999999999999999999 89999999999999999999999999999876543221
Q ss_pred ----eeecc---ccc---cCCCcHHHHHHhhhccCcHHHHhhHHhhh------------------cCCCCHHHHHHHHHH
Q 048535 271 ----MSGRR---PIE---EGKRNLVDRMWSLTERSELLSVLDERLKA------------------KGGYADEVVEKVLHL 322 (409)
Q Consensus 271 ----~~g~~---p~~---~~~~~~~~~vws~~~~~~~~~~~~~~l~~------------------~~~~~~~~~~~l~~l 322 (409)
..|.. +.+ ....+..+|+|+++ ..+++++...... ....+......+.++
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG--vil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 248 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG--IMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDF 248 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHH--HHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHH
Confidence 11111 111 23356778999873 1111111111100 011233345678889
Q ss_pred HHHccCcCCCCCCCHHHHHH
Q 048535 323 GLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~ 342 (409)
+.+||+.||.+|||+.++++
T Consensus 249 i~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 249 LNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHHHhhcChhhCCCHHHHhh
Confidence 99999999999999999985
No 248
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-32 Score=264.38 Aligned_cols=224 Identities=26% Similarity=0.338 Sum_probs=181.3
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
+-|...+.||.|+||.||-+++. .+.||||++... +....++++.|+..|.+++|||+|.+-|+|.. ....|||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr-e~TaWLV 104 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR-EHTAWLV 104 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec-cchHHHH
Confidence 34666788999999999999987 788999999765 33456789999999999999999999999887 6788999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
||||-| |-.+.+.-. +.++.+.++..|+.+.++||+||| +.+.||||||+.||||++.|.+||+|||.|....+
T Consensus 105 MEYClG-SAsDlleVh--kKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P 178 (948)
T KOG0577|consen 105 MEYCLG-SASDLLEVH--KKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP 178 (948)
T ss_pred HHHHhc-cHHHHHHHH--hccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCc
Confidence 999954 877777543 347999999999999999999999 89999999999999999999999999999998887
Q ss_pred Cceeeecccc---------ccCCCcHHHHHHhhhccCcHH-------------HHhhHHhhhc--CCCCHHHHHHHHHHH
Q 048535 268 GQVMSGRRPI---------EEGKRNLVDRMWSLTERSELL-------------SVLDERLKAK--GGYADEVVEKVLHLG 323 (409)
Q Consensus 268 ~~~~~g~~p~---------~~~~~~~~~~vws~~~~~~~~-------------~~~~~~l~~~--~~~~~~~~~~l~~l~ 323 (409)
...+.|.+.+ +.+.|+-..|||+++-.+.-. ..+....... .-...+++..+..++
T Consensus 179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fv 258 (948)
T KOG0577|consen 179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFV 258 (948)
T ss_pred hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHH
Confidence 7666666543 347888899999995443211 1111111100 112457888999999
Q ss_pred HHccCcCCCCCCCHHHHHHH
Q 048535 324 LLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 324 ~~Cl~~dP~~RPt~~evl~~ 343 (409)
..|++.-|.+|||..++++.
T Consensus 259 d~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 259 DSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred HHHHhhCcccCCcHHHHhhc
Confidence 99999999999999998763
No 249
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=1.8e-30 Score=251.57 Aligned_cols=183 Identities=26% Similarity=0.254 Sum_probs=146.8
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|++.+.||+|+||.||++... ++.||+|++... .....+.|.+|+.++..++|+||+++++++.+ ++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD-ENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec-CCeEEEE
Confidence 47889999999999999999986 889999999642 22334568899999999999999999999887 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++|+|.+++... ...+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 80 MDYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred EecCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 9999999999999642 345899999999999999999999 89999999999999999999999999999876543
Q ss_pred Cc-----eeeecccccc-----------CCCcHHHHHHhhhccCcHHHHhhH
Q 048535 268 GQ-----VMSGRRPIEE-----------GKRNLVDRMWSLTERSELLSVLDE 303 (409)
Q Consensus 268 ~~-----~~~g~~p~~~-----------~~~~~~~~vws~~~~~~~~~~~~~ 303 (409)
.. ...|...+.. ..++...|+|+++ ..+++++..
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG--~~l~el~~g 204 (331)
T cd05597 155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLG--VCMYEMLYG 204 (331)
T ss_pred CCCccccceeccccccCHHHHhhccccccCCCCcceeehhh--hHHHHHhhC
Confidence 22 1223222211 2245567899885 344455443
No 250
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=2.4e-31 Score=260.06 Aligned_cols=266 Identities=18% Similarity=0.233 Sum_probs=182.6
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC----
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK---- 181 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---- 181 (409)
...++|+..+.||+|+||.||++... ++.||||++... .......+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 34578999999999999999999876 889999999754 3344567889999999999999999999886422
Q ss_pred -CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEeccc
Q 048535 182 -ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFG 260 (409)
Q Consensus 182 -~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFG 260 (409)
...++||||+++ +|.+++. ..+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCc
Confidence 357999999975 7777763 24889999999999999999999 8999999999999999999999999999
Q ss_pred CcccccCCce---eeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCc--
Q 048535 261 LAKMHHHGQV---MSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHP-- 329 (409)
Q Consensus 261 la~~~~~~~~---~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~-- 329 (409)
+++....... ..|...+ ....++...|+|+++ ..+++++.......+.. ....+..++......
T Consensus 165 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG--~il~el~~g~~pf~~~~---~~~~~~~~~~~~~~~~~ 239 (355)
T cd07874 165 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG--CIMGEMVRHKILFPGRD---YIDQWNKVIEQLGTPCP 239 (355)
T ss_pred ccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHH--HHHHHHHhCCCCCCCCC---HHHHHHHHHHHhCCCCH
Confidence 9987544321 1122221 123456789999996 34555555443322111 111122222211111
Q ss_pred --CCCCCCCHHHHHHHHhcC-------------cCCCC---CCCCCcchhHHhhhcccCCCCcccccccCCCCCcccc
Q 048535 330 --EANSRPTIRQVLKMLEGQ-------------TEGTG---LEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEI 389 (409)
Q Consensus 330 --dP~~RPt~~evl~~L~~~-------------~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~ 389 (409)
....+|+....++..... ..... ........+++.+|+..+|.+|+++.+++.||||...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred HHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 111122222211110000 00000 0001123689999999999999999999999999743
No 251
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=4.5e-31 Score=249.69 Aligned_cols=173 Identities=25% Similarity=0.376 Sum_probs=141.2
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
++|+..+.||+|+||.||+|.+. ++.||+|.+... .....+.+.+|+++++.++||||+++++++.. +...++||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR-KKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc-CCeEEEEE
Confidence 46888899999999999999986 889999998643 22235678899999999999999999999986 77899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
||+++++|.++... ...+++.++..++.|+++||+||| +.+++|+||+|+||++++++.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 80 EFVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred ecCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 99999999887743 235899999999999999999999 789999999999999999999999999998765432
Q ss_pred ce----eeecc---ccc----cCCCcHHHHHHhhh
Q 048535 269 QV----MSGRR---PIE----EGKRNLVDRMWSLT 292 (409)
Q Consensus 269 ~~----~~g~~---p~~----~~~~~~~~~vws~~ 292 (409)
.. ..+.. +.+ ....+..+|+|+++
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 188 (286)
T cd07846 154 GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVG 188 (286)
T ss_pred ccccCcccceeeccCcHHhccccccCchHhHHHHH
Confidence 21 11111 111 12345678999985
No 252
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=1.5e-30 Score=243.47 Aligned_cols=220 Identities=26% Similarity=0.396 Sum_probs=166.1
Q ss_pred CCCccceeecCCceEEEEEEEC-CcEEEEEEeccCC------hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDS------EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
+|+..+.||+|+||.||+|... ++.+|+|.+.... ......+.+|++++++++|+||+++++++.+ ....++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD-DNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec-CCeEEE
Confidence 4778899999999999999876 8889999986431 2234568899999999999999999999987 678999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
+|||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+|+||||+||++++++.+||+|||+++...
T Consensus 80 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 80 FMEFVPGGSISSILNR---FGPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 9999999999999954 245889999999999999999999 8899999999999999999999999999987542
Q ss_pred CCc----------eeeecc---ccc---cCCCcHHHHHHhhhccCcHHHHhhHHhh------------------hcCCCC
Q 048535 267 HGQ----------VMSGRR---PIE---EGKRNLVDRMWSLTERSELLSVLDERLK------------------AKGGYA 312 (409)
Q Consensus 267 ~~~----------~~~g~~---p~~---~~~~~~~~~vws~~~~~~~~~~~~~~l~------------------~~~~~~ 312 (409)
... ...|.. |.+ ...++...|+|+++ ..+++++....+ .....+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG--~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 231 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIG--CTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLP 231 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHH--HHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCC
Confidence 110 011111 111 23346778999973 111222111111 001223
Q ss_pred HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 313 DEVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 313 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
......+.+++.+||+.+|++||++.++++
T Consensus 232 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 232 DSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 334556778888888888888888887764
No 253
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=9.1e-31 Score=243.17 Aligned_cols=223 Identities=27% Similarity=0.484 Sum_probs=172.7
Q ss_pred CCccceeecCCceEEEEEEEC--C----cEEEEEEeccCChH-HHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--G----VEVALKRISLDSEH-GMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~----~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
|++.+.||.|+||.||++... + ..||+|.+...... ..+.+..|+.++..++|+||+++++++.+ .+..+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTE-EEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-CCeeEEE
Confidence 456789999999999999987 3 78999999766433 56789999999999999999999999987 5789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++++|.+++..... ..+++..+..++.|++.||+||| +.+++|+||||+||++++++.++|+|||+++....
T Consensus 80 ~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EeccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 999999999999964321 22899999999999999999999 89999999999999999999999999999987654
Q ss_pred Cceeee---c-----ccc---ccCCCcHHHHHHhhhccCcHHHHhh----------------HHhh-hcCCCCHHHHHHH
Q 048535 268 GQVMSG---R-----RPI---EEGKRNLVDRMWSLTERSELLSVLD----------------ERLK-AKGGYADEVVEKV 319 (409)
Q Consensus 268 ~~~~~g---~-----~p~---~~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~-~~~~~~~~~~~~l 319 (409)
...... . .+. ....++..+|+|+++. .+.+++. .... .....+...+..+
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~--i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGV--LLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEI 233 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHH--HHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHH
Confidence 421111 0 011 1244567789998741 1111111 1100 0012223356788
Q ss_pred HHHHHHccCcCCCCCCCHHHHHHHH
Q 048535 320 LHLGLLCAHPEANSRPTIRQVLKML 344 (409)
Q Consensus 320 ~~l~~~Cl~~dP~~RPt~~evl~~L 344 (409)
.+++.+||+.||++|||+.|+++.|
T Consensus 234 ~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 234 YKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHHHCcCChhhCcCHHHHHhhC
Confidence 9999999999999999999998864
No 254
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=1.9e-30 Score=241.37 Aligned_cols=224 Identities=23% Similarity=0.344 Sum_probs=171.9
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|+..+.||+|+||.||++... ++.||+|.+... .....+++.+|+.++++++||||+++++++.. .+..++|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE-NGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC-CCeEEEEEe
Confidence 4788899999999999999886 889999998643 34455689999999999999999999999876 778999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++++|.+++... ....+++.++..++.|++.||.||| +.+++|+||+|+|||++.++.++|+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 80 YCEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred cCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 99999999998653 2345899999999999999999999 8999999999999999999999999999997654322
Q ss_pred e----eeeccc---c---ccCCCcHHHHHHhhh-------------ccCcHHHHhhHHhhhc-CCCCHHHHHHHHHHHHH
Q 048535 270 V----MSGRRP---I---EEGKRNLVDRMWSLT-------------ERSELLSVLDERLKAK-GGYADEVVEKVLHLGLL 325 (409)
Q Consensus 270 ~----~~g~~p---~---~~~~~~~~~~vws~~-------------~~~~~~~~~~~~l~~~-~~~~~~~~~~l~~l~~~ 325 (409)
. ..|... . .....+...|+|+++ ......+.++..+... ...+......+.+++.+
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 235 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQ 235 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHH
Confidence 1 111111 1 113344567888863 1112222222222211 12334456678899999
Q ss_pred ccCcCCCCCCCHHHHHH
Q 048535 326 CAHPEANSRPTIRQVLK 342 (409)
Q Consensus 326 Cl~~dP~~RPt~~evl~ 342 (409)
||+.+|++||++.+|++
T Consensus 236 ~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 236 LFKRNPRDRPSVNSILE 252 (256)
T ss_pred HhhCChhhCcCHHHHhh
Confidence 99999999999999986
No 255
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=2.7e-31 Score=247.17 Aligned_cols=219 Identities=27% Similarity=0.402 Sum_probs=166.8
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHH--HHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGM--REFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~--~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
|+..+.||+|+||+||++... ++.||+|.+........ ....+|+.++++++||||+++++++.+ ....++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-DNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-SSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-cccccccccc
Confidence 456789999999999999998 67899999987644332 344669999999999999999999987 7789999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC-Cc
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH-GQ 269 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~-~~ 269 (409)
+++++|.+++. ....+++..+..++.|+++||.||| +.+|+|+||||+||+++.++.++|+|||.+..... ..
T Consensus 80 ~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~ 153 (260)
T PF00069_consen 80 CPGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE 153 (260)
T ss_dssp ETTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS
T ss_pred ccccccccccc---ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 99999999996 2356899999999999999999999 78999999999999999999999999999975311 11
Q ss_pred ---eeeec---ccc---c-cCCCcHHHHHHhhhccCcHHHHhhHHhhhc----------------------CCCCHHHHH
Q 048535 270 ---VMSGR---RPI---E-EGKRNLVDRMWSLTERSELLSVLDERLKAK----------------------GGYADEVVE 317 (409)
Q Consensus 270 ---~~~g~---~p~---~-~~~~~~~~~vws~~~~~~~~~~~~~~l~~~----------------------~~~~~~~~~ 317 (409)
...+. .+. . ....+...|+|+++. .+.+++....... .........
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~--il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGI--ILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSE 231 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHH--HHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHH
T ss_pred cccccccccccccccccccccccccccccccccc--ccccccccccccccccchhhhhhhhhcccccccccccccchhHH
Confidence 11111 111 1 245678899998841 2222222211100 000001126
Q ss_pred HHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 318 KVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 318 ~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.+.+++..||+.||++|||+.++++
T Consensus 232 ~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 232 ELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 7888999999999999999988875
No 256
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=4.1e-32 Score=245.85 Aligned_cols=269 Identities=22% Similarity=0.330 Sum_probs=193.9
Q ss_pred hCCCCccceeecCCceEEEEEEEC------CcEEEEEEeccCCh--HHHHHHHHHHHHhccCCCCceeeEeeEEEccCCe
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL------GVEVALKRISLDSE--HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKES 183 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 183 (409)
...|+....||+|.||.||++.-. .+.+|+|+++.... .-.....+|+.+++.++||||+.+..++...+..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 356888999999999999999654 24699999976522 2234577999999999999999999988876778
Q ss_pred EEEEEEeCCCCCHHHHHhcC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC----CcEEEe
Q 048535 184 LILIYDYMENGSLDKWIFEC--DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK----MNARLG 257 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~----~~~kl~ 257 (409)
+++++||.+. +|.+.|+-+ .....++...+..|+.||+.|+.||| ++=|+||||||.|||+..+ |.+||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEee
Confidence 9999999998 999988643 23357899999999999999999999 7889999999999999888 899999
Q ss_pred cccCcccccCCc---------eee-ecc-c---cccCCCcHHHHHHhhhccCcHHHHhhH---------HhhhcCCCCHH
Q 048535 258 DFGLAKMHHHGQ---------VMS-GRR-P---IEEGKRNLVDRMWSLTERSELLSVLDE---------RLKAKGGYADE 314 (409)
Q Consensus 258 DFGla~~~~~~~---------~~~-g~~-p---~~~~~~~~~~~vws~~~~~~~~~~~~~---------~l~~~~~~~~~ 314 (409)
|||+||.+...- ++| =.+ | .....|+...|+|+++ +...+++.- .+....++..+
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiG--CIfaElLtl~PlF~g~E~k~~~~~Pfq~d 256 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIG--CIFAELLTLEPLFKGREEKIKTKNPFQHD 256 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHH--HHHHHHHccCccccchhhhcccCCCchHH
Confidence 999999876532 111 011 1 1235678889999986 333333321 12222234444
Q ss_pred HHHHHHHHHHHccCcCCCCCCCH------HHHHHHHhcCcCCC----------CCCCCCcchhHHhhhcccCCCCccccc
Q 048535 315 VVEKVLHLGLLCAHPEANSRPTI------RQVLKMLEGQTEGT----------GLEDEGMNVHLLKRIGTRAMTSSWKFA 378 (409)
Q Consensus 315 ~~~~l~~l~~~Cl~~dP~~RPt~------~evl~~L~~~~~~~----------~~~~~~~~~~~l~~~~~~~~~~~~~~~ 378 (409)
.+.++.+++ -.+.-++=|++ +..+..++...-.. ...++ ...++|.+|+++||.+|+++.
T Consensus 257 Ql~rIf~vL---G~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~-~a~~LL~klL~yDP~kRIta~ 332 (438)
T KOG0666|consen 257 QLDRIFEVL---GTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDP-SALDLLQKLLTYDPIKRITAE 332 (438)
T ss_pred HHHHHHHHc---CCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCc-hHHHHHHHHhccCchhhccHH
Confidence 555555543 33333333443 34444444221111 11222 268999999999999999999
Q ss_pred ccCCCCCccccc
Q 048535 379 GSRGHPTFNEIN 390 (409)
Q Consensus 379 ~~~~hp~~~~~~ 390 (409)
+++.|++|.+.+
T Consensus 333 qAleh~yF~~d~ 344 (438)
T KOG0666|consen 333 QALEHPYFTEDP 344 (438)
T ss_pred HHhcccccccCC
Confidence 999999999864
No 257
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.97 E-value=2.1e-30 Score=248.08 Aligned_cols=225 Identities=17% Similarity=0.230 Sum_probs=170.4
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|+..+.||+|+||.||++... ++.||+|.+.... ......+.+|+.+++.++||||+++++.+.. ++..++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET-KRHLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec-CCEEEEE
Confidence 46888999999999999999987 7899999987552 2345678899999999999999999999886 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++....
T Consensus 80 ~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 80 MEYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred EecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 999999999999954 346899999999999999999999 89999999999999999999999999999874211
Q ss_pred Cc-------------------eeee---ccccc---cCCCcHHHHHHhhhccCcHHHH---------------hhHHhhh
Q 048535 268 GQ-------------------VMSG---RRPIE---EGKRNLVDRMWSLTERSELLSV---------------LDERLKA 307 (409)
Q Consensus 268 ~~-------------------~~~g---~~p~~---~~~~~~~~~vws~~~~~~~~~~---------------~~~~l~~ 307 (409)
.. ...| ..+.+ ...++...|+|+++ ..++++ .......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~vl~el~~g~~pf~~~~~~~~~~~~~~~ 231 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMG--IILYEFLVGCVPFFGDTPEELFGQVISD 231 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHH--HHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence 00 0011 11111 23456678899873 112222 2211111
Q ss_pred cCCC---CHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 308 KGGY---ADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 308 ~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
.... ....+..+.+++.+||+.||++||++.++.+.|+.
T Consensus 232 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 232 DIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred ccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 0011 11345668899999999999999998777776654
No 258
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=1.7e-30 Score=246.16 Aligned_cols=263 Identities=22% Similarity=0.314 Sum_probs=173.9
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccC---CCCceeeEeeEEEcc----CC
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRL---KHRNLVGLRGWCKKE----KE 182 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~----~~ 182 (409)
+|+..+.||+|+||.||+|... ++.||+|.++... ......+.+|+.+++.+ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999987 8899999987542 12223456777777655 799999999988642 24
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 183 SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
..+++|||+++ +|.+++.... ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCcc
Confidence 58999999985 8999886532 345899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCce---eeec---ccc---ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCC
Q 048535 263 KMHHHGQV---MSGR---RPI---EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANS 333 (409)
Q Consensus 263 ~~~~~~~~---~~g~---~p~---~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~ 333 (409)
+....... ..|. .+. ....++..+|+|+++ ..+++++................++.. ..-...+..
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG--~~l~~l~~g~~~f~~~~~~~~~~~~~~---~~~~~~~~~ 230 (288)
T cd07863 156 RIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVG--CIFAEMFRRKPLFCGNSEADQLGKIFD---LIGLPPEDD 230 (288)
T ss_pred ccccCcccCCCccccccccCchHhhCCCCCCcchhhhHH--HHHHHHHhCCcCcCCCCHHHHHHHHHH---HhCCCChhh
Confidence 87543221 1111 111 124566788999996 344555433222111112222222222 111111111
Q ss_pred CCCHHHHHH-HHhcCc----CCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 334 RPTIRQVLK-MLEGQT----EGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 334 RPt~~evl~-~L~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
.|.-..+.. .+.... ....+.-+....+++.+|+..+|.+|++..+++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 231 WPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred CcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 111000000 000000 00000112234899999999999999999999999997
No 259
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=2.4e-30 Score=247.88 Aligned_cols=223 Identities=24% Similarity=0.358 Sum_probs=171.4
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
.+.|+..+.||+|+||.||+|... ++.||+|.+... .....+.+.+|+++++.++||||++++++|.+ .+..++
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-~~~~~l 92 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-EHTAWL 92 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-CCeEEE
Confidence 456888899999999999999986 899999998643 33445678999999999999999999999987 678899
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
||||++ |+|.+++... ...+++..+..++.|++.||.||| +.+|+||||+|+||++++++.+||+|||++....
T Consensus 93 v~e~~~-g~l~~~~~~~--~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 93 VMEYCL-GSASDILEVH--KKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVS 166 (307)
T ss_pred EHHhhC-CCHHHHHHHc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecC
Confidence 999997 5887777532 346899999999999999999999 8999999999999999999999999999997665
Q ss_pred CCceeeeccc---cc------cCCCcHHHHHHhhhccCcHHHHhhHHhh----------------hcCC-CCHHHHHHHH
Q 048535 267 HGQVMSGRRP---IE------EGKRNLVDRMWSLTERSELLSVLDERLK----------------AKGG-YADEVVEKVL 320 (409)
Q Consensus 267 ~~~~~~g~~p---~~------~~~~~~~~~vws~~~~~~~~~~~~~~l~----------------~~~~-~~~~~~~~l~ 320 (409)
......+... .+ ...++..+|+|+++ ..+++++..... .... ....+...+.
T Consensus 167 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G--~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (307)
T cd06607 167 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG--ITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFR 244 (307)
T ss_pred CCCCccCCccccCceeeeccCCCCCCcccchHHHH--HHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHH
Confidence 4332222211 11 13345678888874 122222221110 0011 1234566789
Q ss_pred HHHHHccCcCCCCCCCHHHHHHH
Q 048535 321 HLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 321 ~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
+++.+||+.+|++||++.+++..
T Consensus 245 ~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 245 NFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HHHHHHhcCChhhCcCHHHHhcC
Confidence 99999999999999999999874
No 260
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=3.6e-30 Score=242.79 Aligned_cols=220 Identities=26% Similarity=0.374 Sum_probs=170.2
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
-|+..+.||+|+||.||+|... +..||+|.+... .....+.+.+|+.++.+++||||+++++++.. ++..++||||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-DTKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe-CCeEEEEEEe
Confidence 3667889999999999999875 789999998654 33445678999999999999999999999987 6789999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV 270 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 270 (409)
+++|+|.+++.. ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||+++.......
T Consensus 84 ~~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 84 LGGGSALDLLEP----GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence 999999999842 35899999999999999999999 89999999999999999999999999999876543211
Q ss_pred ----eeec---cccc---cCCCcHHHHHHhhhccCcHHHHhhHHhhh----------------cCCCCHHHHHHHHHHHH
Q 048535 271 ----MSGR---RPIE---EGKRNLVDRMWSLTERSELLSVLDERLKA----------------KGGYADEVVEKVLHLGL 324 (409)
Q Consensus 271 ----~~g~---~p~~---~~~~~~~~~vws~~~~~~~~~~~~~~l~~----------------~~~~~~~~~~~l~~l~~ 324 (409)
..+. .+.+ ....+...|+|+++. .+++++...... ...........+.+++.
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~--~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 234 (277)
T cd06641 157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGI--TAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE 234 (277)
T ss_pred hhccccCCccccChhhhccCCCCchhhHHHHHH--HHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHH
Confidence 1111 1111 133456788998741 112221111110 01122334567889999
Q ss_pred HccCcCCCCCCCHHHHHHH
Q 048535 325 LCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 325 ~Cl~~dP~~RPt~~evl~~ 343 (409)
+||+.+|.+||++.++++.
T Consensus 235 ~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 235 ACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHccCChhhCcCHHHHHhC
Confidence 9999999999999999984
No 261
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=2e-30 Score=246.32 Aligned_cols=220 Identities=22% Similarity=0.246 Sum_probs=168.3
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|+..+.||+|+||.||++... ++.||+|.+... .....+.+.+|++++++++||||+++++++.. ....++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-DSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc-CCeEEEE
Confidence 46888999999999999999986 799999998653 23345678999999999999999999999887 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+|+||+|+|||++.++.+||+|||+++....
T Consensus 80 ~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 80 MEYVPGGELFSHLRK---SGRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred EecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 999999999999954 356899999999999999999999 89999999999999999999999999999987654
Q ss_pred Cc-eeeeccc------cccCCCcHHHHHHhhhccCcHHHHhhH---------------HhhhcCCCCHHHHHHHHHHHHH
Q 048535 268 GQ-VMSGRRP------IEEGKRNLVDRMWSLTERSELLSVLDE---------------RLKAKGGYADEVVEKVLHLGLL 325 (409)
Q Consensus 268 ~~-~~~g~~p------~~~~~~~~~~~vws~~~~~~~~~~~~~---------------~l~~~~~~~~~~~~~l~~l~~~ 325 (409)
.. ...|... ......+...|+|+++ ..+++++.. ........+......+.+++.+
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 231 (290)
T cd05580 154 RTYTLCGTPEYLAPEIILSKGYGKAVDWWALG--ILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRN 231 (290)
T ss_pred CCCCCCCCccccChhhhcCCCCCccccHHHHH--HHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHH
Confidence 32 1112111 1123345567888874 112222211 1111122333445677888889
Q ss_pred ccCcCCCCCC-----CHHHHH
Q 048535 326 CAHPEANSRP-----TIRQVL 341 (409)
Q Consensus 326 Cl~~dP~~RP-----t~~evl 341 (409)
||+.||.+|| +++|++
T Consensus 232 ~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 232 LLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred HccCCHHHccCcccCCHHHHH
Confidence 9999999998 555554
No 262
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.97 E-value=3.4e-30 Score=241.57 Aligned_cols=227 Identities=22% Similarity=0.358 Sum_probs=171.0
Q ss_pred CCCccceeecCCceEEEEEEEC---CcEEEEEEeccC----------ChHHHHHHHHHHHHhcc-CCCCceeeEeeEEEc
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL---GVEVALKRISLD----------SEHGMREFLAEVSSLGR-LKHRNLVGLRGWCKK 179 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~---~~~vAvK~~~~~----------~~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~ 179 (409)
+|+..+.||+|+||.||+|... ++.+|+|.+... ......++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 4788899999999999999986 578999988532 22345668889998875 799999999999987
Q ss_pred cCCeEEEEEEeCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEec
Q 048535 180 EKESLILIYDYMENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGD 258 (409)
Q Consensus 180 ~~~~~~lv~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~D 258 (409)
++..+++|||+++++|.+++... .....+++..+..++.|++.||.|||+ ..+++|+||||+||+++.++.+||+|
T Consensus 81 -~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 -NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred -CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEec
Confidence 77899999999999999988542 234568999999999999999999993 26799999999999999999999999
Q ss_pred ccCcccccCCc---eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHH---------------hhhc-CC-CC
Q 048535 259 FGLAKMHHHGQ---VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDER---------------LKAK-GG-YA 312 (409)
Q Consensus 259 FGla~~~~~~~---~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~---------------l~~~-~~-~~ 312 (409)
||++....... ...|...+ ....++...|+|+++ ..+++++... .... .+ ..
T Consensus 158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG--~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 235 (269)
T cd08528 158 FGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFG--CILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPE 235 (269)
T ss_pred ccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHH--HHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCc
Confidence 99998755432 11121111 123356678999873 1111111111 0000 01 11
Q ss_pred HHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 048535 313 DEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 313 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
......+.+++.+||+.||++||++.|+..+++
T Consensus 236 ~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 236 GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 134567899999999999999999999999885
No 263
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=2.1e-30 Score=243.83 Aligned_cols=220 Identities=25% Similarity=0.350 Sum_probs=169.3
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
++|+..+.||.|+||.||+|... ++.||+|.+.... ......+.+|+.+++.++|+||+++++++.+ ....++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK-GSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE-CCeEEEEEE
Confidence 36788899999999999999986 8899999997653 4455678999999999999999999999887 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++++|.+++.. ..+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++|+|||+++......
T Consensus 80 ~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 80 YCGGGSCLDLLKP----GKLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eeCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 9999999999953 27899999999999999999999 8999999999999999999999999999998765431
Q ss_pred ----eeeec---cccc---cCCCcHHHHHHhhhccCcHHHHhhHHhhh----------------cCCCCHH-HHHHHHHH
Q 048535 270 ----VMSGR---RPIE---EGKRNLVDRMWSLTERSELLSVLDERLKA----------------KGGYADE-VVEKVLHL 322 (409)
Q Consensus 270 ----~~~g~---~p~~---~~~~~~~~~vws~~~~~~~~~~~~~~l~~----------------~~~~~~~-~~~~l~~l 322 (409)
...|. .+.+ ...++..+|+|+++ ..+++++...... ....... ....+.++
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG--~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLG--ITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDF 230 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHH--HHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHH
Confidence 11111 1111 23456788999974 1222222211110 0111111 34567788
Q ss_pred HHHccCcCCCCCCCHHHHHH
Q 048535 323 GLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~ 342 (409)
+.+||+.+|++|||++++++
T Consensus 231 l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 231 VSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHHHhhCChhhCcCHHHHhh
Confidence 88888888888888888865
No 264
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=2e-30 Score=251.36 Aligned_cols=184 Identities=24% Similarity=0.250 Sum_probs=146.4
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|+..+.||+|+||.||++... ++.+|+|.+... .......+.+|+.++..++|+||+++++++.+ .+..++|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD-ENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec-CCEEEEE
Confidence 47888999999999999999987 788999998642 22334558899999999999999999998887 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++|+|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~ey~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 80 MDYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred EeccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 9999999999999642 246899999999999999999999 89999999999999999999999999999875432
Q ss_pred Cc-----eeeecccc---c--------cCCCcHHHHHHhhhccCcHHHHhhHH
Q 048535 268 GQ-----VMSGRRPI---E--------EGKRNLVDRMWSLTERSELLSVLDER 304 (409)
Q Consensus 268 ~~-----~~~g~~p~---~--------~~~~~~~~~vws~~~~~~~~~~~~~~ 304 (409)
.. ...|...+ + ...++..+|+|+++ ..+++++...
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlG--vil~ell~g~ 205 (332)
T cd05623 155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLG--VCMYEMLYGE 205 (332)
T ss_pred CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeH--HHHHHHhcCC
Confidence 21 11222221 1 12345677888886 3445554433
No 265
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.97 E-value=3.8e-30 Score=239.18 Aligned_cols=220 Identities=25% Similarity=0.420 Sum_probs=169.2
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC-----hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS-----EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
+|+..+.||+|+||.||+|... +..|++|.+.... .+..+.+.+|+.++++++|+||+++++++.. ....++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE-EDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec-CCeEEE
Confidence 4677889999999999999986 8899999986542 3356789999999999999999999999887 678999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
++||+++++|.+++.. ...+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++....
T Consensus 80 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 80 FLELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEEecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 9999999999999954 245899999999999999999999 8999999999999999999999999999987654
Q ss_pred CCc---eeeecc---c---cccCC-CcHHHHHHhhhccCcHHHHhhHHh-----------------hhcCCCCHHHHHHH
Q 048535 267 HGQ---VMSGRR---P---IEEGK-RNLVDRMWSLTERSELLSVLDERL-----------------KAKGGYADEVVEKV 319 (409)
Q Consensus 267 ~~~---~~~g~~---p---~~~~~-~~~~~~vws~~~~~~~~~~~~~~l-----------------~~~~~~~~~~~~~l 319 (409)
... ...|.. + ..... .+...|+|+++. .+++++.... ......+......+
T Consensus 154 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~--~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (258)
T cd06632 154 EFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGC--TVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEA 231 (258)
T ss_pred ccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHH--HHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHH
Confidence 332 111111 1 11122 566788998731 1111111100 00112333445678
Q ss_pred HHHHHHccCcCCCCCCCHHHHHH
Q 048535 320 LHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 320 ~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.+++.+||+.+|++||++.++++
T Consensus 232 ~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 232 KDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHHHHHHhhcCcccCcCHHHHhc
Confidence 88999999999999999999875
No 266
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=6.1e-31 Score=248.62 Aligned_cols=261 Identities=24% Similarity=0.304 Sum_probs=182.9
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|+..+.||+|+||.||+|... |+.||+|.++... ......+.+|++++++++||||+++++++.+ ....++++|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHS-DKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhcc-CCceEEEEe
Confidence 4778899999999999999986 8899999997542 2233567889999999999999999999887 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|++ ++|.+++... ...+++..+..++.||++||.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 80 ~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 80 YCD-QDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred cCC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 997 4888887542 345899999999999999999999 8999999999999999999999999999998654321
Q ss_pred e----eeec---cccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 048535 270 V----MSGR---RPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIR 338 (409)
Q Consensus 270 ~----~~g~---~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 338 (409)
- ..+. .+.+ ...++...|+|+++ ..+++++....+...... ....+..+...+-..++..-|.+.
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG--~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG--CIFAELANAGRPLFPGND--VDDQLKRIFRLLGTPTEESWPGVS 229 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHH--HHHHHHHhcCCCCcCCCC--HHHHHHHHHHHhCCCChHHhHHhh
Confidence 0 0011 1111 12346789999996 445555544332111111 112233333333333333333333
Q ss_pred HHHHHHhcCcCCCC--------CCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 339 QVLKMLEGQTEGTG--------LEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 339 evl~~L~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
++..... ....+. +.-.....+++.+|+..+|.+|.+.++++.||||
T Consensus 230 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 230 KLPDYKP-YPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred hcccccc-cCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 3222110 000000 0011223689999999999999999999999997
No 267
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=4e-30 Score=243.88 Aligned_cols=225 Identities=28% Similarity=0.373 Sum_probs=167.2
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCeEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KESLILIY 188 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~~lv~ 188 (409)
++|...+.||.|++|.||++... ++.+|+|.+... .......+.+|++++++++||||++++++|... ...+++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46788899999999999999986 789999999754 334557799999999999999999999988653 34689999
Q ss_pred EeCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 189 DYMENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 189 E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
||+++++|.+++... .....+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999987532 23456899999999999999999999 89999999999999999999999999999875432
Q ss_pred Cc--eeeecc---c---cccCCCcHHHHHHhhhccCcHHHHhhHHhhhc---------------------------CCCC
Q 048535 268 GQ--VMSGRR---P---IEEGKRNLVDRMWSLTERSELLSVLDERLKAK---------------------------GGYA 312 (409)
Q Consensus 268 ~~--~~~g~~---p---~~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~---------------------------~~~~ 312 (409)
.. ...+.. + .....++...|+|+++ ..+++++....... ....
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG--~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd06621 158 SLAGTFTGTSFYMAPERIQGKPYSITSDVWSLG--LTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNG 235 (287)
T ss_pred cccccccCCccccCHHHhcCCCCCchhhHHHHH--HHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCC
Confidence 21 111111 1 1123456678899874 11122221111100 0000
Q ss_pred HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 313 DEVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 313 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
......+.+++.+||+.+|++|||+.|+++
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 236 IKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 123456778888888888888888888776
No 268
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=3.5e-30 Score=241.33 Aligned_cols=148 Identities=28% Similarity=0.481 Sum_probs=129.5
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-----ChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCeE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-----SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KESL 184 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~ 184 (409)
.+|+..+.||+|+||.||+|... +..||+|.+... .......+.+|+.++++++||||+++++++... ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47888999999999999999875 889999998643 223456788999999999999999999988653 3578
Q ss_pred EEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 185 ILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
++++||+++++|.+++.. ...+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 82 ~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 899999999999999954 335899999999999999999999 89999999999999999999999999999975
Q ss_pred cc
Q 048535 265 HH 266 (409)
Q Consensus 265 ~~ 266 (409)
..
T Consensus 156 ~~ 157 (266)
T cd06651 156 LQ 157 (266)
T ss_pred cc
Confidence 43
No 269
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=2.3e-30 Score=245.79 Aligned_cols=234 Identities=23% Similarity=0.265 Sum_probs=172.0
Q ss_pred ccHHHHHHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEEc
Q 048535 103 VSYQEIHAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKK 179 (409)
Q Consensus 103 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 179 (409)
++++++..++++|+..+.||+|+||.||++... ++.+|+|.+.... .....+.+|+.++.++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 455667778899999999999999999999986 8899999986432 2235678899999999 89999999999875
Q ss_pred cC----CeEEEEEEeCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcE
Q 048535 180 EK----ESLILIYDYMENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNA 254 (409)
Q Consensus 180 ~~----~~~~lv~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~ 254 (409)
.+ ...++||||+++|+|.+++... .....+++..+..++.|++.||.||| +.+++||||||+||++++++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCE
Confidence 32 3589999999999999988542 12346899999999999999999999 8999999999999999999999
Q ss_pred EEecccCcccccCCc----eeeecc---cccc--------CCCcHHHHHHhhhccCcHHHHhhHHhh-------------
Q 048535 255 RLGDFGLAKMHHHGQ----VMSGRR---PIEE--------GKRNLVDRMWSLTERSELLSVLDERLK------------- 306 (409)
Q Consensus 255 kl~DFGla~~~~~~~----~~~g~~---p~~~--------~~~~~~~~vws~~~~~~~~~~~~~~l~------------- 306 (409)
||+|||+++...... ...|.. +.+. ...+..+|+|+++ ..+++++.....
T Consensus 168 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG--vi~~el~~g~~p~~~~~~~~~~~~~ 245 (291)
T cd06639 168 KLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLG--ITAIELGDGDPPLFDMHPVKTLFKI 245 (291)
T ss_pred EEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHH--HHHHHHhhCCCCCCCCcHHHHHHHH
Confidence 999999988654322 111111 1110 1135678899874 112222211111
Q ss_pred --hc---CCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 307 --AK---GGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 307 --~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.. ...+......+.+++.+||+.+|++||++.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 246 PRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred hcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00 0112233446777888888888888888888765
No 270
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=4.2e-30 Score=240.12 Aligned_cols=224 Identities=25% Similarity=0.379 Sum_probs=168.7
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
++|+..+.||.|+||+||+|... +..+|+|++... .....+.+.+|+++++.++|+||+++++.+.. .+..+++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVV-GDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEee-CCEEEEEEe
Confidence 47889999999999999999975 789999999754 23356789999999999999999999998887 778999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++++|.+++........+++..+..++.|++.||.||| +.+++|+||||+||++++++.+||+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 9999999999965433356899999999999999999999 8999999999999999999999999999987654322
Q ss_pred e--------eeecccc---c---cC-CCcHHHHHHhhhccCcHHHHhhHHhhhc----------------CCCC-----H
Q 048535 270 V--------MSGRRPI---E---EG-KRNLVDRMWSLTERSELLSVLDERLKAK----------------GGYA-----D 313 (409)
Q Consensus 270 ~--------~~g~~p~---~---~~-~~~~~~~vws~~~~~~~~~~~~~~l~~~----------------~~~~-----~ 313 (409)
. ..|...+ + .. ..+..+|+|+++ ..+++++....... .... .
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG--~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFG--ITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYK 234 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHh--HHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccc
Confidence 1 1122211 1 11 345667888873 12222222211100 0000 1
Q ss_pred HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 314 EVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 314 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.....+.+++..||+.||++|||+.++++
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 235 KYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 33456677777888888888888777764
No 271
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=2e-30 Score=274.15 Aligned_cols=232 Identities=20% Similarity=0.260 Sum_probs=173.4
Q ss_pred HHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCe
Q 048535 109 HAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KES 183 (409)
Q Consensus 109 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~ 183 (409)
....++|.+.+.||+|+||+||++... +..||+|.+... .......|..|+.+|++|+|||||+++++|... ...
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 344578999999999999999999987 788999998754 344567899999999999999999999988643 456
Q ss_pred EEEEEEeCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcC----CCceeecCCCCCCeeeCCC-------
Q 048535 184 LILIYDYMENGSLDKWIFECD-ESIALSWEQRIKVLKDVASGILYLYEGW----ESKVLHRDIKASNVLLDKK------- 251 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~----~~~ivHrDlKp~NILl~~~------- 251 (409)
+||||||+++|+|.++|.... ....+++..++.|+.||+.||.|||... ..+||||||||+||||+.+
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 899999999999999996532 2346999999999999999999999421 1469999999999999642
Q ss_pred ----------CcEEEecccCcccccCCc---eeeeccccc--------cCCCcHHHHHHhhhccCcHHHHhhHHhh----
Q 048535 252 ----------MNARLGDFGLAKMHHHGQ---VMSGRRPIE--------EGKRNLVDRMWSLTERSELLSVLDERLK---- 306 (409)
Q Consensus 252 ----------~~~kl~DFGla~~~~~~~---~~~g~~p~~--------~~~~~~~~~vws~~~~~~~~~~~~~~l~---- 306 (409)
..+||+|||+++...... ...|...+. ...++..+|+|+++ ..+++++....+
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG--~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALG--CIIYELCSGKTPFHKA 246 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHH--HHHHHHHHCCCCCCcC
Confidence 348999999998754322 112222221 12356788999984 222222221111
Q ss_pred -----------hcCCCC-HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 307 -----------AKGGYA-DEVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 307 -----------~~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.....+ ......+.+|+..||+.+|.+||++.|+++
T Consensus 247 ~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 247 NNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 101111 223467899999999999999999999984
No 272
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=2.5e-30 Score=244.43 Aligned_cols=262 Identities=23% Similarity=0.297 Sum_probs=176.6
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|+..+.||.|++|.||+|... ++.||||.++... ......+.+|++++++++||||+++++++.+ ....++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-ENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc-CCcEEEEee
Confidence 4788899999999999999986 8899999987542 2234578899999999999999999999886 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|++ ++|.+++... ....+++..+..++.|++.||+||| +.+++|+||+|+||++++++.+||+|||+++......
T Consensus 80 ~~~-~~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 80 FLH-QDLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred ccc-cCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 996 6899988653 2356899999999999999999999 8999999999999999999999999999987653321
Q ss_pred e-------eeeccccc---c-CCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 048535 270 V-------MSGRRPIE---E-GKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIR 338 (409)
Q Consensus 270 ~-------~~g~~p~~---~-~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 338 (409)
. ..+..+.+ . ...+...|+|+++ ..+++++........... ...+.++...--......-|...
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG--~il~~l~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG--CIFAEMVTRRALFPGDSE---IDQLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHH--HHHHHHHHCCCCCCCCCH---HHHHHHHHHHhCCCChhhhhhhh
Confidence 0 00111111 1 2235679999986 345555554433211111 11222222111111111111111
Q ss_pred HHHHHHhcCcCCC-------CCCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 339 QVLKMLEGQTEGT-------GLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 339 evl~~L~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
++-+.-....... .+.-+....+++.+|+..+|.+|.+..+++.||||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 1111100000000 00001122578888888888888888888888887
No 273
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=5e-30 Score=243.47 Aligned_cols=264 Identities=22% Similarity=0.283 Sum_probs=178.1
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++++|...+.||+|+||.||+|... +..||+|.+.... ......+.+|+.+++.++|+||+++++++.. +...++|
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-~~~~~lv 81 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHT-KETLTFV 81 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEec-CCeEEEE
Confidence 4678999999999999999999876 8899999997543 2223467899999999999999999999887 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||++ ++|.+++... ...+++..+..++.|++.||.||| +.+|+|+||||+|||++.++++||+|||+++....
T Consensus 82 ~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 82 FEYMH-TDLAQYMIQH--PGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred Eeccc-CCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 99996 6888777542 245788899999999999999999 88999999999999999999999999999875432
Q ss_pred Cc----eeee---ccccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCc-CCCCCC
Q 048535 268 GQ----VMSG---RRPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHP-EANSRP 335 (409)
Q Consensus 268 ~~----~~~g---~~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~-dP~~RP 335 (409)
.. ...+ ..+.+ ...++...|+|+++ ..+++++........ .....+.+.+. ..++.. .+...|
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG--~~l~~l~~g~~~f~~--~~~~~~~~~~~-~~~~~~~~~~~~~ 230 (291)
T cd07870 156 PSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAG--CIFIEMLQGQPAFPG--VSDVFEQLEKI-WTVLGVPTEDTWP 230 (291)
T ss_pred CCCCCCCccccccccCCceeecCCCCCcHHHHHHHH--HHHHHHHhCCCCCCC--chhHHHHHHHH-HHHcCCCChhhhh
Confidence 11 0001 11111 12346678999986 345555544332111 11111222221 111111 111101
Q ss_pred CHHHHHHHHhcCcC----------CCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 336 TIRQVLKMLEGQTE----------GTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 336 t~~evl~~L~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
....+-+....... ...........+++.+|+..+|.+|+++.+++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 231 GVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 11000000000000 0000111233689999999999999999999999997
No 274
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=7.4e-31 Score=257.13 Aligned_cols=225 Identities=23% Similarity=0.315 Sum_probs=182.4
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
.-...|.+.+.||+|.|+.|.+|+.. +..||+|.+... +....+.+.+|+++|+.++|||||+++.+... ...+|
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t-~~~ly 131 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIET-EATLY 131 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeee-cceeE
Confidence 34577899999999999999999987 999999999765 44455669999999999999999999999887 77899
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
+||||+.+|.+++|+.. ...+.+..+..++.|+..|++||| ++.|+|||||++||||+.++++||+|||++..+
T Consensus 132 lV~eya~~ge~~~yl~~---~gr~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~ 205 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVK---HGRMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFF 205 (596)
T ss_pred EEEEeccCchhHHHHHh---cccchhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceee
Confidence 99999999999999964 345667888999999999999999 899999999999999999999999999999988
Q ss_pred cCCc---eeeecccccc-------CCCcHHHHHHhhhccCcHHHHhhHHhhhc---------------CCCCHHHHHHHH
Q 048535 266 HHGQ---VMSGRRPIEE-------GKRNLVDRMWSLTERSELLSVLDERLKAK---------------GGYADEVVEKVL 320 (409)
Q Consensus 266 ~~~~---~~~g~~p~~~-------~~~~~~~~vws~~~~~~~~~~~~~~l~~~---------------~~~~~~~~~~l~ 320 (409)
..+. ..+|.+|+.. .......|+|+++. .++.++...|++. -..+.-....+.
T Consensus 206 ~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgv--vly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce 283 (596)
T KOG0586|consen 206 DYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGV--VLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCE 283 (596)
T ss_pred cccccccccCCCCCccChHhhcCcccCCcceehhhhhh--hheeeeecccccCCcccccccchheeeeecccceeechhH
Confidence 7654 4567777643 22345678999842 2333333333322 223334455788
Q ss_pred HHHHHccCcCCCCCCCHHHHHHH
Q 048535 321 HLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 321 ~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
+++.+.+-.+|.+|++++++.+.
T Consensus 284 ~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 284 DLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred HHHHHhhccCccccCCHHHhhhh
Confidence 89999999999999999998753
No 275
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=4.8e-30 Score=238.39 Aligned_cols=224 Identities=21% Similarity=0.326 Sum_probs=169.8
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|+..+.||+|+||.||++... ++.+|+|.+... .....+.+.+|++++++++||||+++++.+.. .+..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE-DKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec-CCEEEEEEe
Confidence 4778899999999999999886 889999998654 33456789999999999999999999998876 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC-CcEEEecccCcccccCC
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK-MNARLGDFGLAKMHHHG 268 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~-~~~kl~DFGla~~~~~~ 268 (409)
|+++++|.+++... ....+++..+..++.|+++||.||| +++++|+||||+||+++++ +.+||+|||+++.....
T Consensus 80 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 80 YAPGGTLAEYIQKR-CNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred cCCCCCHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 99999999999653 2345899999999999999999999 8999999999999999865 46899999999865432
Q ss_pred c---eeeeccc---c---ccCCCcHHHHHHhhhc-------------cCcHHHHhhHHhhh-cCCCCHHHHHHHHHHHHH
Q 048535 269 Q---VMSGRRP---I---EEGKRNLVDRMWSLTE-------------RSELLSVLDERLKA-KGGYADEVVEKVLHLGLL 325 (409)
Q Consensus 269 ~---~~~g~~p---~---~~~~~~~~~~vws~~~-------------~~~~~~~~~~~l~~-~~~~~~~~~~~l~~l~~~ 325 (409)
. ...|... . .....+...|+|+++. .............. ....+......+.+++.+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 235 (256)
T cd08220 156 SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILS 235 (256)
T ss_pred ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHH
Confidence 2 1111111 1 1133455678888731 01111111111110 112233456678999999
Q ss_pred ccCcCCCCCCCHHHHHH
Q 048535 326 CAHPEANSRPTIRQVLK 342 (409)
Q Consensus 326 Cl~~dP~~RPt~~evl~ 342 (409)
||+.+|++|||+.|+++
T Consensus 236 ~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 236 MLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HccCChhhCCCHHHHhh
Confidence 99999999999999976
No 276
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.97 E-value=2.8e-30 Score=244.08 Aligned_cols=262 Identities=20% Similarity=0.290 Sum_probs=188.5
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|++.+.||+|+||.||+|... +..||+|++.... ......+.+|+.++++++||||+++++++.. ....++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH-GSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec-CCeeEEEec
Confidence 4778899999999999999986 8899999997653 3445679999999999999999999999987 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+ +++|.+++.... ..+++.++..++.|+++||.||| +.+++|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 80 YM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred cc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 99 999999986432 56999999999999999999999 8999999999999999999999999999998765432
Q ss_pred e-----eeec---cccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCH
Q 048535 270 V-----MSGR---RPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTI 337 (409)
Q Consensus 270 ~-----~~g~---~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 337 (409)
. ..|. .+.+ ...++...|+|+++ ..+++++......... .....+..+....-.+.+...|..
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG--~~l~~l~tg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVG--CIFAELLNGSPLFPGE---NDIEQLAIVFRTLGTPNEETWPGL 228 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHH--HHHHHHHcCCcCcCCC---CHHHHHHHHHHHcCCCChHHHhhc
Confidence 0 0111 1111 12346789999986 3445555442221111 112233333333434444444444
Q ss_pred HHHHHHHhcCcCCCC--------CCCCCcchhHHhhhcccCCCCcccccccCCCCCcc
Q 048535 338 RQVLKMLEGQTEGTG--------LEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFN 387 (409)
Q Consensus 338 ~evl~~L~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~ 387 (409)
.++............ +..+..-.+++.+|+..+|.+|++..+++.||||+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 229 TSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred cCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 333222111000000 00112337899999999999999999999999985
No 277
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=2.1e-30 Score=245.24 Aligned_cols=173 Identities=25% Similarity=0.372 Sum_probs=141.7
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
++|+..+.||+|+||.||+|... ++.||+|.++.. .....+.+.+|++++++++|+||+++++++.. ++..+++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-KGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-CCEEEEEE
Confidence 36888999999999999999986 789999998654 23345778999999999999999999999987 77899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
||++++.+..+.. ....+++..+..++.|++.||.||| +.+++|+||+|+||++++++.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 80 EYVERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred ecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 9999877776653 2345899999999999999999999 899999999999999999999999999998875543
Q ss_pred ce-----eeec---cccc---cC-CCcHHHHHHhhh
Q 048535 269 QV-----MSGR---RPIE---EG-KRNLVDRMWSLT 292 (409)
Q Consensus 269 ~~-----~~g~---~p~~---~~-~~~~~~~vws~~ 292 (409)
.. ..+. .+.+ .. .++...|+|+++
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG 189 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIG 189 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHH
Confidence 21 1111 1111 12 456788999985
No 278
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=2.8e-30 Score=241.78 Aligned_cols=220 Identities=20% Similarity=0.362 Sum_probs=166.3
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC------hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS------EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 185 (409)
+|+..+.||+|+||.||+|... ++.||+|.+.... ....+.+.+|+.++++++|+||+++++++.+ .+..+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE-DSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc-CCeEE
Confidence 4788899999999999999875 8899999996432 2235678999999999999999999999987 67899
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC-cEEEecccCccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM-NARLGDFGLAKM 264 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~-~~kl~DFGla~~ 264 (409)
+||||+++++|.+++.. ...+++..+..++.|++.||.||| +.+++|+||||+||+++.++ .+||+|||++..
T Consensus 80 ~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 80 LFVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 99999999999999954 346899999999999999999999 89999999999999998776 599999999876
Q ss_pred ccCCc--------eeeec---cccc---cCCCcHHHHHHhhhccCcHHHHhhHHhh--------------------hcCC
Q 048535 265 HHHGQ--------VMSGR---RPIE---EGKRNLVDRMWSLTERSELLSVLDERLK--------------------AKGG 310 (409)
Q Consensus 265 ~~~~~--------~~~g~---~p~~---~~~~~~~~~vws~~~~~~~~~~~~~~l~--------------------~~~~ 310 (409)
..... ...|. .+.+ ...++...|+|+++ ..+++++..... ....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG--~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 231 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVG--CVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPS 231 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHH--HHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCC
Confidence 54321 01111 1111 13445667888873 111111111110 1123
Q ss_pred CCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 311 YADEVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 311 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.+......+.+++.+|++.+|++|||+.++++
T Consensus 232 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 232 IPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 34445567788888888888888888888764
No 279
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=1.2e-30 Score=248.26 Aligned_cols=219 Identities=22% Similarity=0.287 Sum_probs=165.7
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
|.....||+|+||.||++... +..||||.+........+.+.+|+.++++++|+||+++++.+.. .+..++||||++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-~~~~~lv~e~~~ 102 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLV-GDELWVVMEFLE 102 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheec-CCeEEEEEeCCC
Confidence 333467999999999999875 88999999976655666789999999999999999999999887 678999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--- 269 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--- 269 (409)
+++|.+++.. ..+++..+..++.||+.||.||| +.+|+||||||+||++++++.+||+|||++.......
T Consensus 103 ~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~ 175 (292)
T cd06658 103 GGALTDIVTH----TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR 175 (292)
T ss_pred CCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccC
Confidence 9999998842 35899999999999999999999 8899999999999999999999999999987543211
Q ss_pred -eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhc----------------C--CCCHHHHHHHHHHHH
Q 048535 270 -VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAK----------------G--GYADEVVEKVLHLGL 324 (409)
Q Consensus 270 -~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~----------------~--~~~~~~~~~l~~l~~ 324 (409)
...|...+ ....++...|+|+++ ..+++++....... . .........+.+++.
T Consensus 176 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG--vil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 253 (292)
T cd06658 176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLG--IMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLD 253 (292)
T ss_pred ceeecCccccCHHHHccCCCCchhhHHHHH--HHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHH
Confidence 11122111 113456778999974 11222222111100 0 111123446777888
Q ss_pred HccCcCCCCCCCHHHHHHH
Q 048535 325 LCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 325 ~Cl~~dP~~RPt~~evl~~ 343 (409)
.||+.||++|||+.++++.
T Consensus 254 ~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 254 LMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHccCChhHCcCHHHHhhC
Confidence 8888888888888888763
No 280
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=4.2e-30 Score=243.89 Aligned_cols=263 Identities=24% Similarity=0.356 Sum_probs=179.7
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCCh-HHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSE-HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
++|+..+.||+|++|.||+|... ++.||+|.+..... .....+.+|++++++++|+||+++++++.+ ....++|||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHT-KKTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEec-CCeEEEEEe
Confidence 67888999999999999999986 88999999865422 223457789999999999999999999887 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++ +|.+++.... ..+++..+..++.|+++||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 84 YLDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred cCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 9985 9999986532 36899999999999999999999 8999999999999999999999999999987543211
Q ss_pred ------e-eeeccccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 048535 270 ------V-MSGRRPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIR 338 (409)
Q Consensus 270 ------~-~~g~~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 338 (409)
. .....+.+ ...++...|+|+++ ..+++++.......... .....+..+....-...+...|...
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG--~il~~l~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVG--CIFYEMATGRPLFPGST--DVEDQLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred ccccccccccccCCcHHhhcCcccCcHHHHHHHH--HHHHHHHhCCCCCCCCc--cHHHHHHHHHHhcCCCChhhhhhhh
Confidence 0 00111111 12356678999986 34555554433221111 1111122121111111222222221
Q ss_pred HHHHHHhcCcC----------CCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 339 QVLKMLEGQTE----------GTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 339 evl~~L~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
........... .+.........+++.+|+..+|..|.+..+++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 11111100000 0011111233689999999999999999999999998
No 281
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.1e-30 Score=254.10 Aligned_cols=219 Identities=22% Similarity=0.343 Sum_probs=178.6
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCCH
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGSL 196 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gsL 196 (409)
-.||+|.||+||-|++. ...+|||.+...+....+-+..|+.+.++|+|.|||+++|.|.+ ++.+-|.||-.|||||
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se-nGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSE-NGFFKIFMEQVPGGSL 659 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCC-CCeEEEEeecCCCCcH
Confidence 36999999999999987 66789999988877777889999999999999999999999877 7788899999999999
Q ss_pred HHHHhcCCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC-CCcEEEecccCcccccC----Cc
Q 048535 197 DKWIFECDESIAL--SWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK-KMNARLGDFGLAKMHHH----GQ 269 (409)
Q Consensus 197 ~~~l~~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~-~~~~kl~DFGla~~~~~----~~ 269 (409)
.++|+..= +++ ++...-.+.+||++||.||| ++.|||||||-+|||++. .|.+||+|||.++.+.. .+
T Consensus 660 SsLLrskW--GPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TE 734 (1226)
T KOG4279|consen 660 SSLLRSKW--GPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTE 734 (1226)
T ss_pred HHHHHhcc--CCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCCcccc
Confidence 99996532 345 78888899999999999999 899999999999999965 68899999998876532 33
Q ss_pred eeeeccccc--------cCCCcHHHHHHhhhccC--------------cHH-HHhh-HHhhhcCCCCHHHHHHHHHHHHH
Q 048535 270 VMSGRRPIE--------EGKRNLVDRMWSLTERS--------------ELL-SVLD-ERLKAKGGYADEVVEKVLHLGLL 325 (409)
Q Consensus 270 ~~~g~~p~~--------~~~~~~~~~vws~~~~~--------------~~~-~~~~-~~l~~~~~~~~~~~~~l~~l~~~ 325 (409)
..||..-+. .-.|...+|+|+++... ... .++. +..+..++.|.+...+...++++
T Consensus 735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~Filr 814 (1226)
T KOG4279|consen 735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILR 814 (1226)
T ss_pred ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHH
Confidence 555654332 24577889999995321 111 1111 12233467889999999999999
Q ss_pred ccCcCCCCCCCHHHHHHH
Q 048535 326 CAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 326 Cl~~dP~~RPt~~evl~~ 343 (409)
|+.+||.+||+++++++.
T Consensus 815 cFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 815 CFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HcCCCcccCccHHHhccC
Confidence 999999999999999863
No 282
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.97 E-value=1e-32 Score=248.62 Aligned_cols=219 Identities=26% Similarity=0.357 Sum_probs=178.7
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
-|++..+||+|+||.||++.++ |+.+|||.+..++ +.+++..|+.+|.+++.|++|++||.+.. ...+|+|||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK-~sDLWIVMEYC 110 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFK-HSDLWIVMEYC 110 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhcc-CCceEeehhhc
Confidence 3667789999999999999987 9999999998654 56889999999999999999999998887 67899999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc--
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ-- 269 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-- 269 (409)
..|++.+.++. .+.+|++.++..++.+.++||+||| ...-||||||+.||||+.+|.+||+|||.|..+....
T Consensus 111 GAGSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK 185 (502)
T KOG0574|consen 111 GAGSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK 185 (502)
T ss_pred CCCcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHh
Confidence 99999999975 3457999999999999999999999 8899999999999999999999999999997665422
Q ss_pred --eeeeccc------cccCCCcHHHHHHhhhccCcHHHHhhHHh------------------hhcCCCCHHHHHHHHHHH
Q 048535 270 --VMSGRRP------IEEGKRNLVDRMWSLTERSELLSVLDERL------------------KAKGGYADEVVEKVLHLG 323 (409)
Q Consensus 270 --~~~g~~p------~~~~~~~~~~~vws~~~~~~~~~~~~~~l------------------~~~~~~~~~~~~~l~~l~ 323 (409)
.+.|.+- ++.-.|+...|+|+++-.. .++...+. +..-.-++.++.++.+++
T Consensus 186 RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITa--IEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi 263 (502)
T KOG0574|consen 186 RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITA--IEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFI 263 (502)
T ss_pred hCccccCcccccHHHHHHhccchhhhHhhhcchh--hhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHH
Confidence 2233332 2345688999999995321 11111110 000123567889999999
Q ss_pred HHccCcCCCCCCCHHHHHH
Q 048535 324 LLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 324 ~~Cl~~dP~~RPt~~evl~ 342 (409)
..|+-.+|++|-|+-++++
T Consensus 264 ~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 264 RSCLIKKPEERKTALRLCE 282 (502)
T ss_pred HHHhcCCHHHHHHHHHHhh
Confidence 9999999999999998875
No 283
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=2.7e-30 Score=244.14 Aligned_cols=234 Identities=24% Similarity=0.356 Sum_probs=174.1
Q ss_pred cccHHHHHHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEE
Q 048535 102 RVSYQEIHAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCK 178 (409)
Q Consensus 102 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~ 178 (409)
..++.++..+.+.|+..+.||+|+||.||+|... ++.+|+|.+.... ....++..|+.++.++ +|+||+++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 83 (282)
T cd06636 5 DIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFI 83 (282)
T ss_pred hhhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence 3466677778899999999999999999999986 7899999986543 3346788999999998 7999999999885
Q ss_pred c-----cCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCc
Q 048535 179 K-----EKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMN 253 (409)
Q Consensus 179 ~-----~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~ 253 (409)
. .....+++|||+++|+|.+++... ....+++..+..++.|++.||.||| +.+|+|+||||+||++++++.
T Consensus 84 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 84 KKSPPGHDDQLWLVMEFCGAGSVTDLVKNT-KGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred cccccCCCCEEEEEEEeCCCCcHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCC
Confidence 3 135789999999999999998653 2345889999999999999999999 899999999999999999999
Q ss_pred EEEecccCcccccCC----ceeeeccc---cc--------cCCCcHHHHHHhhhccCcHHHHhhHHhhhc----------
Q 048535 254 ARLGDFGLAKMHHHG----QVMSGRRP---IE--------EGKRNLVDRMWSLTERSELLSVLDERLKAK---------- 308 (409)
Q Consensus 254 ~kl~DFGla~~~~~~----~~~~g~~p---~~--------~~~~~~~~~vws~~~~~~~~~~~~~~l~~~---------- 308 (409)
++|+|||+++..... ....|... .+ ...++...|+|+++ ..+++++.......
T Consensus 160 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG--~~l~el~~g~~p~~~~~~~~~~~~ 237 (282)
T cd06636 160 VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLG--ITAIEMAEGAPPLCDMHPMRALFL 237 (282)
T ss_pred EEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHH--HHHHHHHhCCCCccccCHHhhhhh
Confidence 999999998754321 11112111 11 12345568899874 12222222111100
Q ss_pred -------CCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 309 -------GGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 309 -------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
..........+.+++.+||+.||.+|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 238 IPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred HhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0011124457788888888888888888888764
No 284
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=5.6e-30 Score=238.86 Aligned_cols=221 Identities=24% Similarity=0.388 Sum_probs=171.7
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCCh-HHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSE-HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
++|+..+.||+|++|.||++... ++.||+|++..... ...+.+.+|+..+.+++|+||+++++++.. ....++|||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYK-EGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcc-CCeEEEEEE
Confidence 46888899999999999999987 89999999976643 456789999999999999999999999987 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWE-SKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
|+++++|.+++... ..+++..+..++.|+++||+||| + .+++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 80 YMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred ecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 99999999999542 56899999999999999999999 8 99999999999999999999999999999876433
Q ss_pred cee----eeccc------cccCCCcHHHHHHhhhccCcHHHHhhHH------------------hhh-cCCCCHH-HHHH
Q 048535 269 QVM----SGRRP------IEEGKRNLVDRMWSLTERSELLSVLDER------------------LKA-KGGYADE-VVEK 318 (409)
Q Consensus 269 ~~~----~g~~p------~~~~~~~~~~~vws~~~~~~~~~~~~~~------------------l~~-~~~~~~~-~~~~ 318 (409)
... .+... .....++...|+|+++ ..+++++... ... ....+.. .+..
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG--~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (264)
T cd06623 154 LDQCNTFVGTVTYMSPERIQGESYSYAADIWSLG--LTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPE 231 (264)
T ss_pred CCcccceeecccccCHhhhCCCCCCchhhHHHHH--HHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHH
Confidence 211 11111 1123456678899874 1122222211 110 0112222 4567
Q ss_pred HHHHHHHccCcCCCCCCCHHHHHH
Q 048535 319 VLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 319 l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
+.+++..||+.+|++|||+.++++
T Consensus 232 l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 232 FRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred HHHHHHHHccCChhhCCCHHHHHh
Confidence 888888888888888888888876
No 285
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=7.2e-30 Score=241.18 Aligned_cols=262 Identities=26% Similarity=0.357 Sum_probs=179.4
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC-hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS-EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
+|+..+.||.|++|.||+|+.. |..||||.++... ......+.+|+.++++++||||+++++++.+ .+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHT-ENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEee-CCcEEEEEec
Confidence 5788899999999999999986 8899999997653 2234567889999999999999999999987 6788999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc-
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ- 269 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~- 269 (409)
+++ +|.+++........+++..+..++.|++.||.||| +.+++||||||+||++++++.+||+|||+++......
T Consensus 80 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 80 MDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred CCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 985 89998865443456899999999999999999999 8899999999999999999999999999997543211
Q ss_pred -----eee-eccccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHH
Q 048535 270 -----VMS-GRRPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQ 339 (409)
Q Consensus 270 -----~~~-g~~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e 339 (409)
..+ ...+.+ ...++..+|+|+++ ..+++++............+.... +...+-.+.+...+...+
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG--~~l~~l~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVG--CIMAEMITGRPLFPGTNNEDQLLK---IFRIMGTPTESTWPGISQ 230 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHH--HHHHHHHhCCCCCCCCCcHHHHHH---HHHHhCCCChhhHHHHhc
Confidence 000 011111 12346788999985 344555544333222222222222 222221111111000000
Q ss_pred HHHHHhcCcCC--------CCCCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 340 VLKMLEGQTEG--------TGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 340 vl~~L~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
. ..+...... ..+.-+....+++.+|+..+|.+|++.++++.||||
T Consensus 231 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 231 L-PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred C-chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 0 000000000 000012234788999999999999999999999997
No 286
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.4e-30 Score=244.23 Aligned_cols=148 Identities=22% Similarity=0.247 Sum_probs=132.7
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
+.|+..+.||+|.-|+||++.+. +..+|+|++.+. ..+...+...|-+||+.++||.+..||+.+.. +...|++
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet-~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET-DKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec-cceeEEE
Confidence 45667789999999999999998 478999999765 33445667889999999999999999999987 7889999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
||||+||+|..+.++. ....+++..+..++.+|+-||+||| -.|||.|||||+||||-++|.+.|+||.|+...
T Consensus 156 meyCpGGdL~~LrqkQ-p~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQ-PGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred EecCCCccHHHHHhhC-CCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 9999999999988764 4567999999999999999999999 899999999999999999999999999998654
No 287
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=3e-30 Score=241.17 Aligned_cols=224 Identities=24% Similarity=0.380 Sum_probs=168.8
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
++|+..+.||+|+||.||++... ++.||+|.+... .....+++.+|++++++++||||+++++++.. ....++++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYN-NGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeec-CCEEEEEEE
Confidence 36777889999999999999997 889999998765 34456789999999999999999999999987 688999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWE-SKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
|+++++|.+++.... ..+++..+..++.|++.||+||| + .+++|+||||+||++++++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 80 YMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred ecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 999999999996432 56899999999999999999999 7 99999999999999999999999999998754321
Q ss_pred c--eeeecc---c---cccCCCcHHHHHHhhhcc------------------CcHHHHhhHHhhhc-CCCCHH-HHHHHH
Q 048535 269 Q--VMSGRR---P---IEEGKRNLVDRMWSLTER------------------SELLSVLDERLKAK-GGYADE-VVEKVL 320 (409)
Q Consensus 269 ~--~~~g~~---p---~~~~~~~~~~~vws~~~~------------------~~~~~~~~~~l~~~-~~~~~~-~~~~l~ 320 (409)
. ...+.. + .....++...|+|+++.. ....+.+....... ...+.. ....+.
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (265)
T cd06605 155 LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQ 234 (265)
T ss_pred HhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHH
Confidence 1 011111 1 112345667889887410 01111222111110 111222 455677
Q ss_pred HHHHHccCcCCCCCCCHHHHHH
Q 048535 321 HLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 321 ~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
+++..||..||++|||+.+++.
T Consensus 235 ~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 235 DFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HHHHHHcCCCchhCcCHHHHhh
Confidence 8888888888888888888764
No 288
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=7.2e-30 Score=238.96 Aligned_cols=221 Identities=24% Similarity=0.361 Sum_probs=165.0
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-----ChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCeE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-----SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KESL 184 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~ 184 (409)
++|+..+.||+|+||.||+|... ++.||+|.+... .....+.+.+|+.++++++||||+++++++.+. ...+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 57888999999999999999986 889999998532 223456788999999999999999999987653 3468
Q ss_pred EEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 185 ILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
+++|||+++|+|.+++... ..+++....+++.|++.||.||| +.+++|+||||+|||++.++.+||+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 8999999999999998542 35789999999999999999999 89999999999999999999999999999975
Q ss_pred ccCC-------ceeeecccc---c---cCCCcHHHHHHhhhccCcHHHHhhHHhh-----------------hcCCCCHH
Q 048535 265 HHHG-------QVMSGRRPI---E---EGKRNLVDRMWSLTERSELLSVLDERLK-----------------AKGGYADE 314 (409)
Q Consensus 265 ~~~~-------~~~~g~~p~---~---~~~~~~~~~vws~~~~~~~~~~~~~~l~-----------------~~~~~~~~ 314 (409)
.... ...+|...+ + ....+..+|+|+++. .+++++..... ..+..+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~--il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGC--TVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPH 233 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHH--HHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchh
Confidence 4321 111222111 1 233456788998741 12222211110 01223344
Q ss_pred HHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 315 VVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 315 ~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
....+.+++.+|+. +|++||+++|+++
T Consensus 234 ~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 234 VSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred hCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 55667778888874 8888888888765
No 289
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=7e-30 Score=238.37 Aligned_cols=220 Identities=27% Similarity=0.393 Sum_probs=166.0
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCCh--HHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSE--HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|+..+.||+|+||.||+|... ++.||+|.++.... ...+.+.+|+.++++++|+||+++++++.. .+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH-REKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec-CCEEEEEEe
Confidence 4778899999999999999875 88999999976533 467889999999999999999999998876 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++++|.+++.. ...+++..+..++.|++.||.||| +.+|+|+||||+||++++++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 80 YCSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred cCCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 9999999999953 345889999999999999999999 8999999999999999999999999999998754322
Q ss_pred eee--------eccc---cc---cC---CCcHHHHHHhhhccCcHHHHhhHHhhh-----------------cCCCCHH-
Q 048535 270 VMS--------GRRP---IE---EG---KRNLVDRMWSLTERSELLSVLDERLKA-----------------KGGYADE- 314 (409)
Q Consensus 270 ~~~--------g~~p---~~---~~---~~~~~~~vws~~~~~~~~~~~~~~l~~-----------------~~~~~~~- 314 (409)
... +... .+ .. ......|+|+++ ..+++++...... ....+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G--~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLG--CVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSL 231 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHH--HHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCccc
Confidence 111 1111 11 11 145667888874 1122222111110 0111111
Q ss_pred -HHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 315 -VVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 315 -~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
....+.+++.+||+.+|++|||+.+++.
T Consensus 232 ~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 232 QLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 2456677888888888888888887754
No 290
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=3.9e-30 Score=242.88 Aligned_cols=223 Identities=21% Similarity=0.346 Sum_probs=160.1
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC-hHHHHHHHHHHHH-hccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS-EHGMREFLAEVSS-LGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
++|++.+.||+|+||.||++... |+.||+|+++... .....++..|+.. ++.++||||+++++++.. ++..+++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR-EGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec-CCcEEEEh
Confidence 46888999999999999999986 8999999997552 2334456667765 566799999999999987 67899999
Q ss_pred EeCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-ceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 189 DYMENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWES-KVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 189 E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
||++ |+|.+++... .....+++..+..++.|++.||+||| ++ +++||||||+|||++.++.+||+|||+++...
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 9997 6898887643 23356899999999999999999999 65 89999999999999999999999999998654
Q ss_pred CCce---eeecccc---cc-------CCCcHHHHHHhhhccCcHHHHhhHHhhh-----------------cCCCC-HHH
Q 048535 267 HGQV---MSGRRPI---EE-------GKRNLVDRMWSLTERSELLSVLDERLKA-----------------KGGYA-DEV 315 (409)
Q Consensus 267 ~~~~---~~g~~p~---~~-------~~~~~~~~vws~~~~~~~~~~~~~~l~~-----------------~~~~~-~~~ 315 (409)
.... ..|..++ +. ..++...|+|+++ ..+++++....+. ....+ ...
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG--~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd06617 156 DSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLG--ITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKF 233 (283)
T ss_pred cccccccccCCccccChhhcCCcccccccCccccchhhH--HHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCcccc
Confidence 3211 1121111 10 2234567888874 1122222211110 01111 123
Q ss_pred HHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 316 VEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 316 ~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
+..+.+++.+||+.+|.+|||+.++++
T Consensus 234 ~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 234 SPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 456777777777777888877777764
No 291
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.97 E-value=7.1e-30 Score=247.40 Aligned_cols=149 Identities=24% Similarity=0.234 Sum_probs=131.6
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|++.+.||+|+||.||+++.. ++.||+|.+... .......+.+|..++..++|+||+++++++.+ .+..|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~-~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD-ENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCEEEEE
Confidence 47889999999999999999987 788999998643 22334568889999999999999999999887 7789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++|+|.+++... ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 80 MDYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred EeCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999999652 246899999999999999999999 89999999999999999999999999999976543
No 292
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=5.3e-30 Score=245.82 Aligned_cols=267 Identities=23% Similarity=0.302 Sum_probs=187.2
Q ss_pred CCCccceeecCCceEEEEEEEC----CcEEEEEEeccCC---hHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCeEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL----GVEVALKRISLDS---EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KESLI 185 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~~ 185 (409)
+|+..+.||+|+||.||+|... +..||+|.+.... ....+.+.+|+.++++++||||+++++++.+. ....+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778899999999999999984 6899999997632 33446778999999999999999999999873 16799
Q ss_pred EEEEeCCCCCHHHHHhcCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC----CCcEEEecc
Q 048535 186 LIYDYMENGSLDKWIFECD--ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK----KMNARLGDF 259 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~----~~~~kl~DF 259 (409)
+||||+++ +|.+++.... ....+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 7777764322 2236899999999999999999999 899999999999999999 899999999
Q ss_pred cCcccccCCce-------eeec---cccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCC------HHHHHHH
Q 048535 260 GLAKMHHHGQV-------MSGR---RPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYA------DEVVEKV 319 (409)
Q Consensus 260 Gla~~~~~~~~-------~~g~---~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~------~~~~~~l 319 (409)
|+++....... ..+. .+.+ ...++..+|+|+++ ..+++++........... ......+
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG--~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIG--CIFAELLTLEPIFKGREAKIKKSNPFQRDQL 234 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHH--HHHHHHHhcCCCCcCCcccccccchhHHHHH
Confidence 99986543211 0111 1111 12356778999986 344555443332211111 1122344
Q ss_pred HHHHHHccCcCCCCCCCHHHHHHHHh---cCcCCCCC------------CCCCcchhHHhhhcccCCCCcccccccCCCC
Q 048535 320 LHLGLLCAHPEANSRPTIRQVLKMLE---GQTEGTGL------------EDEGMNVHLLKRIGTRAMTSSWKFAGSRGHP 384 (409)
Q Consensus 320 ~~l~~~Cl~~dP~~RPt~~evl~~L~---~~~~~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp 384 (409)
..+...+-..++..++.+.+..+... ........ .......+++.+|+..+|..|.++++++.||
T Consensus 235 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~ 314 (316)
T cd07842 235 ERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHP 314 (316)
T ss_pred HHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCC
Confidence 55555555556665554444432222 11100000 1112236899999999999999999999999
Q ss_pred Cc
Q 048535 385 TF 386 (409)
Q Consensus 385 ~~ 386 (409)
||
T Consensus 315 ~f 316 (316)
T cd07842 315 YF 316 (316)
T ss_pred CC
Confidence 98
No 293
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=3.5e-30 Score=249.34 Aligned_cols=215 Identities=21% Similarity=0.234 Sum_probs=157.6
Q ss_pred eecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccC---CCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 121 IGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRL---KHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 121 lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
||+|+||+||+|... ++.||||++... .......+..|..++... +||||+++++++.. ....++||||++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~-~~~~~lv~e~~~ 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT-DSDLYLVTDYMS 79 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec-CCeEEEEEcCCC
Confidence 799999999999986 899999999643 122334556677777655 79999999998887 678999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ--- 269 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~--- 269 (409)
+|+|.+++.. ...+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~ 153 (330)
T cd05586 80 GGELFWHLQK---EGRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTT 153 (330)
T ss_pred CChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCc
Confidence 9999999853 346899999999999999999999 8999999999999999999999999999987532211
Q ss_pred -eeeecccc---c----cCCCcHHHHHHhhhcc-------------CcHHHHhhHHhhhcCCCC-HHHHHHHHHHHHHcc
Q 048535 270 -VMSGRRPI---E----EGKRNLVDRMWSLTER-------------SELLSVLDERLKAKGGYA-DEVVEKVLHLGLLCA 327 (409)
Q Consensus 270 -~~~g~~p~---~----~~~~~~~~~vws~~~~-------------~~~~~~~~~~l~~~~~~~-~~~~~~l~~l~~~Cl 327 (409)
...|...+ + ...++...|+|+++.. ....+............+ ......+.+++.+||
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L 233 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLL 233 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHc
Confidence 12232222 1 1235677899998411 111122221111111112 123567789999999
Q ss_pred CcCCCCCCC----HHHHHH
Q 048535 328 HPEANSRPT----IRQVLK 342 (409)
Q Consensus 328 ~~dP~~RPt----~~evl~ 342 (409)
+.||.+||+ +.++++
T Consensus 234 ~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 234 NRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CCCHHHCCCCCCCHHHHhc
Confidence 999999995 555543
No 294
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=8e-30 Score=240.11 Aligned_cols=219 Identities=26% Similarity=0.396 Sum_probs=167.7
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCC---CCceeeEeeEEEccCCeEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLK---HRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~lv 187 (409)
.|+..+.||+|+||.||+|.+. ++.||+|.++.. ......++.+|+.++++++ |||++++++++.. +...++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-GPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-CCEEEEE
Confidence 4777889999999999999985 899999998754 3445567889999999986 9999999999886 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++++|.+++.. ..+++..+..++.|++.||.||| +.+|+|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 81 MEYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred EecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 999999999999843 36899999999999999999999 89999999999999999999999999999976543
Q ss_pred Cc----eeeecc---ccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhh----------------cCCCCH-HHHHHH
Q 048535 268 GQ----VMSGRR---PIE----EGKRNLVDRMWSLTERSELLSVLDERLKA----------------KGGYAD-EVVEKV 319 (409)
Q Consensus 268 ~~----~~~g~~---p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~----------------~~~~~~-~~~~~l 319 (409)
.. ...|.. +.+ ...++...|+|+++ ..+++++....+. ...... .....+
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG--~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (277)
T cd06917 154 NSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLG--ITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLL 231 (277)
T ss_pred CccccccccCCcceeCHHHhccCCccccchhHHHHH--HHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHH
Confidence 32 111111 111 12235678888874 1222222211110 011111 145578
Q ss_pred HHHHHHccCcCCCCCCCHHHHHH
Q 048535 320 LHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 320 ~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.+++.+||+.||++||++.++++
T Consensus 232 ~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 232 REFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred HHHHHHHcCCCcccCcCHHHHhh
Confidence 88999999999999999999876
No 295
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=1.2e-29 Score=243.81 Aligned_cols=261 Identities=21% Similarity=0.259 Sum_probs=171.0
Q ss_pred cceeecCCceEEEEEEEC----CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEc-cCCeEEEEEEeCC
Q 048535 118 ENVIGLGGNGKVYKGQLL----GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKK-EKESLILIYDYME 192 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~~lv~E~~~ 192 (409)
..+||+|+||.||+|+.. +..||+|.+.... ....+.+|+.++++++||||+++++++.. .+...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 367999999999999875 4789999986542 22457889999999999999999998864 2457899999997
Q ss_pred CCCHHHHHhcC------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeee----CCCCcEEEecccCc
Q 048535 193 NGSLDKWIFEC------DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLL----DKKMNARLGDFGLA 262 (409)
Q Consensus 193 ~gsL~~~l~~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----~~~~~~kl~DFGla 262 (409)
+ +|.+++... .....+++..+..++.|++.||.||| +.+|+||||||+|||+ +.++++||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5 888877422 12235889999999999999999999 8999999999999999 56678999999999
Q ss_pred ccccCCc-------eeeec---cccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCC------HHHHHHHHHH
Q 048535 263 KMHHHGQ-------VMSGR---RPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYA------DEVVEKVLHL 322 (409)
Q Consensus 263 ~~~~~~~-------~~~g~---~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~------~~~~~~l~~l 322 (409)
+...... ...|. .+.+ ...++...|+|+++ ..+++++........... ......+..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG--~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 237 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIG--CIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRI 237 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHH--HHHHHHHhCCCCcccccccccccccccHHHHHHH
Confidence 8754321 11111 1222 13357789999996 345555554332211000 0001111122
Q ss_pred HHHccCcCCCC------CCCHHHHHHHHh----------cCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 323 GLLCAHPEANS------RPTIRQVLKMLE----------GQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 323 ~~~Cl~~dP~~------RPt~~evl~~L~----------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
...+-...... .|.......... ...+......+....+++.+|+..+|.+|+|+++++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 238 FSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 11111111111 011111111100 00011111122234689999999999999999999999997
No 296
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=4.4e-30 Score=245.01 Aligned_cols=217 Identities=22% Similarity=0.287 Sum_probs=166.0
Q ss_pred ccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCC
Q 048535 117 EENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENG 194 (409)
Q Consensus 117 ~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~g 194 (409)
....||+|+||.||++... ++.||+|.+........+.+.+|+.++..++||||+++++++.. ++..+++|||++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-~~~~~iv~e~~~~~ 103 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLV-GEELWVLMEFLQGG 103 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheee-CCeEEEEEecCCCC
Confidence 3457999999999999885 89999999976544556778899999999999999999999887 67899999999999
Q ss_pred CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc----e
Q 048535 195 SLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ----V 270 (409)
Q Consensus 195 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~----~ 270 (409)
+|.+++.. ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++....... .
T Consensus 104 ~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~ 176 (297)
T cd06659 104 ALTDIVSQ----TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 176 (297)
T ss_pred CHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccc
Confidence 99998732 35899999999999999999999 8999999999999999999999999999987543221 1
Q ss_pred eeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhc------------------CCCCHHHHHHHHHHHHHc
Q 048535 271 MSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAK------------------GGYADEVVEKVLHLGLLC 326 (409)
Q Consensus 271 ~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~------------------~~~~~~~~~~l~~l~~~C 326 (409)
..|...+ ....++...|+|+++ ..+++++....... ..........+.+++.+|
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG--~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 254 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLG--IMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERM 254 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHH--HHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHH
Confidence 1222211 123456778999974 22222222211100 001112345678888999
Q ss_pred cCcCCCCCCCHHHHHHH
Q 048535 327 AHPEANSRPTIRQVLKM 343 (409)
Q Consensus 327 l~~dP~~RPt~~evl~~ 343 (409)
|+.+|++||++.++++.
T Consensus 255 l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 255 LTREPQERATAQELLDH 271 (297)
T ss_pred hcCCcccCcCHHHHhhC
Confidence 99999999999988873
No 297
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=7.3e-30 Score=242.60 Aligned_cols=260 Identities=22% Similarity=0.277 Sum_probs=172.3
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCC----e
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKE----S 183 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~----~ 183 (409)
++|+..+.||+|+||.||+|... ++.||+|.++... ......+.+|+.+++++ +||||+++++++..... .
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999986 8899999986542 22345788999999999 56999999998876322 3
Q ss_pred EEEEEEeCCCCCHHHHHhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC-CCcEEEeccc
Q 048535 184 LILIYDYMENGSLDKWIFECDE--SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK-KMNARLGDFG 260 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~-~~~~kl~DFG 260 (409)
.|+||||+++ +|.+++..... ...+++..+..++.||++||.||| +.+|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999986 89998864322 246899999999999999999999 899999999999999998 8899999999
Q ss_pred CcccccCCce----eee---ccccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCc
Q 048535 261 LAKMHHHGQV----MSG---RRPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHP 329 (409)
Q Consensus 261 la~~~~~~~~----~~g---~~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~ 329 (409)
+++....... ..+ ..+.+ ...++...|+|+++ ..+++++......... .....+.++.... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG--~~l~~l~~g~~~~~~~---~~~~~~~~~~~~~--~ 229 (295)
T cd07837 157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVG--CIFAEMSRKQPLFPGD---SELQQLLHIFKLL--G 229 (295)
T ss_pred cceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHH--HHHHHHHcCCCCCCCC---CHHHHHHHHHHHh--C
Confidence 9875432110 000 11111 12346678999985 3344444433221111 1222223322211 1
Q ss_pred CCCCCC--CHHHHHH----------HHhcCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCcc
Q 048535 330 EANSRP--TIRQVLK----------MLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFN 387 (409)
Q Consensus 330 dP~~RP--t~~evl~----------~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~ 387 (409)
.|..+. ...++.. .+... .+ .-...-.+++.+|+..+|.+|.+..+++.||||+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 230 TPTEQVWPGVSKLRDWHEFPQWKPQDLSRA--VP--DLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred CCChhhCcchhhccchhhcCcccchhHHHh--cc--ccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 111110 0000000 00000 01 1122346778888888888888888888888874
No 298
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=5e-31 Score=273.93 Aligned_cols=227 Identities=26% Similarity=0.373 Sum_probs=168.7
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEc-------
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKK------- 179 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~------- 179 (409)
+-..+|+..+.||+||||.||+++.+ |+.+|||+|... +......+.+|+.+|++|+|||||+++..+.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 45578888999999999999999988 999999999866 44456678999999999999999999865432
Q ss_pred --------------------------------------------------------------------------------
Q 048535 180 -------------------------------------------------------------------------------- 179 (409)
Q Consensus 180 -------------------------------------------------------------------------------- 179 (409)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------cC-------CeEEEEEEeCCCCCHHHHHhcCCCCCCC-CHHHHHHHHHHHHHHHHH
Q 048535 180 ------------------------EK-------ESLILIYDYMENGSLDKWIFECDESIAL-SWEQRIKVLKDVASGILY 227 (409)
Q Consensus 180 ------------------------~~-------~~~~lv~E~~~~gsL~~~l~~~~~~~~l-~~~~~~~i~~~ia~gL~y 227 (409)
+. ..+||-||||+...|+++++++. .. .....++++++|++||.|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~---~~~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH---FNSQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc---cchhhHHHHHHHHHHHHHHHH
Confidence 00 24789999999988888885432 22 467788999999999999
Q ss_pred HHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc----C-------Cc--------eee---ecccc------c-
Q 048535 228 LYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH----H-------GQ--------VMS---GRRPI------E- 278 (409)
Q Consensus 228 LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~----~-------~~--------~~~---g~~p~------~- 278 (409)
+| +.+||||||||.||+||++..+||+|||+|+... . .+ -.| |+.-+ .
T Consensus 713 IH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~ 789 (1351)
T KOG1035|consen 713 IH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD 789 (1351)
T ss_pred HH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence 99 8999999999999999999999999999998722 0 00 011 11111 1
Q ss_pred c--CCCcHHHHHHhhhc-----------cCcHHHHh----hHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHH
Q 048535 279 E--GKRNLVDRMWSLTE-----------RSELLSVL----DERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVL 341 (409)
Q Consensus 279 ~--~~~~~~~~vws~~~-----------~~~~~~~~----~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl 341 (409)
. ..|+.+.|+++++- ..+-..++ ++.++...++.......-.+++.++++.||++|||+.|++
T Consensus 790 ~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL 869 (1351)
T KOG1035|consen 790 TSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELL 869 (1351)
T ss_pred cccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHh
Confidence 1 35778888888731 01111111 2222222233445556668899999999999999999998
Q ss_pred H
Q 048535 342 K 342 (409)
Q Consensus 342 ~ 342 (409)
+
T Consensus 870 ~ 870 (1351)
T KOG1035|consen 870 N 870 (1351)
T ss_pred h
Confidence 6
No 299
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-31 Score=258.69 Aligned_cols=224 Identities=24% Similarity=0.321 Sum_probs=179.4
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
+.|.++..||.|+||.||++..+ +...|.|++...+....++|+-|++||..++||+||++++.|+. .+.+++..||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~-enkLwiliEF 110 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYF-ENKLWILIEF 110 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc-cCceEEEEee
Confidence 44666788999999999999887 56678999988888889999999999999999999999998877 6789999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC--
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG-- 268 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~-- 268 (409)
|.||-++..+.+. ...|++.++.-++.|++.||.||| +++|||||||+.|||++-+|.++|+|||.+......
T Consensus 111 C~GGAVDaimlEL--~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~q 185 (1187)
T KOG0579|consen 111 CGGGAVDAIMLEL--GRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQ 185 (1187)
T ss_pred cCCchHhHHHHHh--ccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchhHHh
Confidence 9999999988654 357999999999999999999999 899999999999999999999999999998543211
Q ss_pred --ceeeeccc-----------cccCCCcHHHHHHhhhccC-------------cHHHHhhHHhhhcC---CCCHHHHHHH
Q 048535 269 --QVMSGRRP-----------IEEGKRNLVDRMWSLTERS-------------ELLSVLDERLKAKG---GYADEVVEKV 319 (409)
Q Consensus 269 --~~~~g~~p-----------~~~~~~~~~~~vws~~~~~-------------~~~~~~~~~l~~~~---~~~~~~~~~l 319 (409)
....|.+. +....|+..+|+|+++-.- ....++-...+..+ -.|..+...+
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F 265 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSF 265 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHH
Confidence 12222222 2346788999999995221 11112222211111 1355678889
Q ss_pred HHHHHHccCcCCCCCCCHHHHHH
Q 048535 320 LHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 320 ~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.+++..|+..||..||++.++++
T Consensus 266 ~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 266 SDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred HHHHHHHHhcCCccCCCHHHHhh
Confidence 99999999999999999999875
No 300
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=5.5e-30 Score=240.21 Aligned_cols=227 Identities=26% Similarity=0.358 Sum_probs=171.1
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEEcc-----C
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKE-----K 181 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~-----~ 181 (409)
.++++|+..+.||+|+||.||+|... ++.+++|.+..... ..+.+.+|+.+++++ +|+||+++++++... .
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35688999999999999999999986 78899999876543 346789999999999 799999999998752 2
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEeccc
Q 048535 182 ESLILIYDYMENGSLDKWIFECD-ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFG 260 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFG 260 (409)
...++||||+++++|.+++.... ....+++..+..++.|++.||.||| +.+++|+||+|+||++++++.+||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCc
Confidence 34899999999999999986432 2356899999999999999999999 8999999999999999999999999999
Q ss_pred CcccccCCc----eeeecccc---c--------cCCCcHHHHHHhhhccCcHHHHhhHHhhh------------------
Q 048535 261 LAKMHHHGQ----VMSGRRPI---E--------EGKRNLVDRMWSLTERSELLSVLDERLKA------------------ 307 (409)
Q Consensus 261 la~~~~~~~----~~~g~~p~---~--------~~~~~~~~~vws~~~~~~~~~~~~~~l~~------------------ 307 (409)
++....... ...|...+ + ...++..+|+|+++ ..+++++......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG--~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 236 (275)
T cd06608 159 VSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLG--ITAIELADGKPPLCDMHPMRALFKIPRNPPP 236 (275)
T ss_pred cceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhH--HHHHHHHhCCCCccccchHHHHHHhhccCCC
Confidence 987543211 01111111 1 12345568899874 1122222111110
Q ss_pred cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 308 KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 308 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
....+......+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 237 TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00112234567889999999999999999999875
No 301
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=9.2e-30 Score=242.31 Aligned_cols=233 Identities=22% Similarity=0.324 Sum_probs=176.1
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
.++|...+.||+|+||.||++... +..||+|.+........+.+.+|+.++++++||||+++++++.. .+..++|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-~~~~~lv~e 96 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV-GDELWVVME 96 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeee-CCcEEEEEe
Confidence 367888999999999999999875 78899999876555556788999999999999999999999987 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++|+|.+++.. ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 97 YLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred cCCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 9999999999843 35789999999999999999999 8999999999999999999999999999887544322
Q ss_pred ----eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhh----------------cC--CCCHHHHHHHHH
Q 048535 270 ----VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKA----------------KG--GYADEVVEKVLH 321 (409)
Q Consensus 270 ----~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~----------------~~--~~~~~~~~~l~~ 321 (409)
...|...+ .....+...|+|+++ ..+++++...... .. ..+......+.+
T Consensus 170 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG--~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (293)
T cd06647 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG--IMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 247 (293)
T ss_pred cccccccCChhhcCchhhccCCCCchhhHHHHH--HHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHH
Confidence 11121111 113345678888873 1112221111100 00 112234557889
Q ss_pred HHHHccCcCCCCCCCHHHHHHH--HhcCcCCCCCC
Q 048535 322 LGLLCAHPEANSRPTIRQVLKM--LEGQTEGTGLE 354 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt~~evl~~--L~~~~~~~~~~ 354 (409)
++.+||+.+|++||++.+++.. ++.......++
T Consensus 248 li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~~ 282 (293)
T cd06647 248 FLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSLT 282 (293)
T ss_pred HHHHHccCChhhCcCHHHHhcCHHHhcCccccccc
Confidence 9999999999999999999865 44444444333
No 302
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=1.1e-29 Score=238.63 Aligned_cols=220 Identities=25% Similarity=0.381 Sum_probs=163.7
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC----------hHHHHHHHHHHHHhccCCCCceeeEeeEEEccC
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS----------EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK 181 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~----------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 181 (409)
+|...+.||+|+||.||+|... ++.||+|.++... ....+.+.+|+.++++++|||++++++++.. .
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-E 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc-C
Confidence 4667889999999999999875 8899999886421 1123468889999999999999999999887 6
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccC
Q 048535 182 ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGL 261 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 261 (409)
+..++||||+++|+|.+++... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||+
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeeccc
Confidence 7899999999999999999543 46899999999999999999999 88999999999999999999999999999
Q ss_pred cccccCCc------eeeeccc---cc---c--CCCcHHHHHHhhhccCcHHHHhhHHh----------------h-hcCC
Q 048535 262 AKMHHHGQ------VMSGRRP---IE---E--GKRNLVDRMWSLTERSELLSVLDERL----------------K-AKGG 310 (409)
Q Consensus 262 a~~~~~~~------~~~g~~p---~~---~--~~~~~~~~vws~~~~~~~~~~~~~~l----------------~-~~~~ 310 (409)
++...... ...|... .+ . ..++...|+|+++. .+++++.... . ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~--~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 232 (272)
T cd06629 155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGC--VVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPP 232 (272)
T ss_pred cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHH--HHHHHHhCCCCCcCcchHHHHHHhhccccCCc
Confidence 97643211 1111111 11 1 12456678888631 1111111100 0 0011
Q ss_pred ----CCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 311 ----YADEVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 311 ----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
........+.+++..||+.+|++|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 233 IPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 11233567888888999999999999888875
No 303
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=1.9e-29 Score=233.71 Aligned_cols=220 Identities=31% Similarity=0.456 Sum_probs=170.1
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCCh--HHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSE--HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|+..+.||+|++|.||++... ++.||+|.+..... .....+.+|++++++++|||++++++++.+ .+..+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET-SDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe-CCEEEEEEe
Confidence 4778899999999999999886 78999999976643 456789999999999999999999999887 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 80 YAENGSLRQIIKK---FGPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred cCCCCcHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 9999999999854 256999999999999999999999 8999999999999999999999999999998765432
Q ss_pred e----eeecc---cc---ccCCCcHHHHHHhhhccCcHHHHhhHHh----------------hhcCCCCHHHHHHHHHHH
Q 048535 270 V----MSGRR---PI---EEGKRNLVDRMWSLTERSELLSVLDERL----------------KAKGGYADEVVEKVLHLG 323 (409)
Q Consensus 270 ~----~~g~~---p~---~~~~~~~~~~vws~~~~~~~~~~~~~~l----------------~~~~~~~~~~~~~l~~l~ 323 (409)
. ..+.. +. .....+...|+|+++. .+++++.... ......+......+.+++
T Consensus 154 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~--~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 231 (254)
T cd06627 154 KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGC--TVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFL 231 (254)
T ss_pred ccccccccchhhcCHhhhcCCCCCcchhHHHHHH--HHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHH
Confidence 1 11111 11 1122345678887641 1222221111 111222334456788899
Q ss_pred HHccCcCCCCCCCHHHHHH
Q 048535 324 LLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 324 ~~Cl~~dP~~RPt~~evl~ 342 (409)
.+||+.+|++|||+.+++.
T Consensus 232 ~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 232 MQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHhCChhhCcCHHHHhc
Confidence 9999999999999988874
No 304
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=8.9e-30 Score=236.73 Aligned_cols=222 Identities=24% Similarity=0.343 Sum_probs=164.9
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|+..+.||+|+||.||+|... |..||+|.+... .....+.+.+|+.++++++|+||+++++.+.. ....++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE-NGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc-CCeEEEEEe
Confidence 4778899999999999999987 789999998654 22345678899999999999999999998877 778999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC-cEEEecccCcccccCC
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM-NARLGDFGLAKMHHHG 268 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~-~~kl~DFGla~~~~~~ 268 (409)
|+++++|.+++... ....+++..+..++.|+++||.||| +.+++|+||||+||++++++ .+||+|||.+......
T Consensus 80 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 80 YCDGGDLMKRINRQ-RGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred cCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 99999999999653 2335899999999999999999999 89999999999999999885 4699999999765433
Q ss_pred ce----eeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhh----------------cCCCCHHHHHHHHHH
Q 048535 269 QV----MSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKA----------------KGGYADEVVEKVLHL 322 (409)
Q Consensus 269 ~~----~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~----------------~~~~~~~~~~~l~~l 322 (409)
.. ..|...+ .....+...|+|+++ ..+++++...... ...........+.++
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG--~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLG--CVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSL 233 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHH--HHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHH
Confidence 21 1111111 123455678999874 1112222111110 011122234467777
Q ss_pred HHHccCcCCCCCCCHHHHHH
Q 048535 323 GLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~ 342 (409)
+.+||+.+|++|||+.|+++
T Consensus 234 i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 234 ISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred HHHHhccChhhCcCHHHHhh
Confidence 78888888888888877765
No 305
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.8e-30 Score=254.76 Aligned_cols=221 Identities=19% Similarity=0.339 Sum_probs=171.7
Q ss_pred CccceeecCCceEEEEEEEC--CcEEEEEEeccC----ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC-CeEEEEE
Q 048535 116 SEENVIGLGGNGKVYKGQLL--GVEVALKRISLD----SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK-ESLILIY 188 (409)
Q Consensus 116 ~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~~lv~ 188 (409)
+...+||+|+|-+||+|.+. |..||.-.++.. ++...++|..|+++|+.|+|||||+++.++.+.. ..+.+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 34567999999999999987 888887655432 5666789999999999999999999999988743 3477899
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC-CcEEEecccCcccccC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK-MNARLGDFGLAKMHHH 267 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~-~~~kl~DFGla~~~~~ 267 (409)
|.+..|+|+.|+.+. ..++...+.+|++||++||.|||+. .++|||||||.+||+|+.+ |.+||+|+|||.....
T Consensus 123 EL~TSGtLr~Y~kk~---~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKH---RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred ecccCCcHHHHHHHh---ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 999999999999654 4588899999999999999999986 7899999999999999764 8899999999988765
Q ss_pred Cc--eeeecccccc-----CCCcHHHHHHhhhccCcHHHHhhHHhhhc-------------CCCCHH-----HHHHHHHH
Q 048535 268 GQ--VMSGRRPIEE-----GKRNLVDRMWSLTERSELLSVLDERLKAK-------------GGYADE-----VVEKVLHL 322 (409)
Q Consensus 268 ~~--~~~g~~p~~~-----~~~~~~~~vws~~~~~~~~~~~~~~l~~~-------------~~~~~~-----~~~~l~~l 322 (409)
.. .+-|.+-+.. ..|+...||++++ ..+++++....+.. ....+. ..+++.++
T Consensus 199 s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFG--MCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~f 276 (632)
T KOG0584|consen 199 SHAKSVIGTPEFMAPEMYEENYNELVDVYAFG--MCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREF 276 (632)
T ss_pred cccceeccCccccChHHHhhhcchhhhhhhhh--HHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHH
Confidence 43 3456555432 6677888888874 22222222211100 111111 13578999
Q ss_pred HHHccCcCCCCCCCHHHHHHH
Q 048535 323 GLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~~ 343 (409)
+.+|+.. .++|||+.|+++.
T Consensus 277 IekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 277 IEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred HHHHhcC-chhccCHHHHhhC
Confidence 9999999 9999999999963
No 306
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=8e-30 Score=243.12 Aligned_cols=265 Identities=25% Similarity=0.348 Sum_probs=196.3
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccC----
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK---- 181 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---- 181 (409)
...++|++.+.||+|+||.||+|... ++.||+|.++... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999986 8899999997542 223356788999999999999999999887532
Q ss_pred -----CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEE
Q 048535 182 -----ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARL 256 (409)
Q Consensus 182 -----~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl 256 (409)
...++|+||+++ +|.+++... ...+++..+..++.|++.||+||| +.+|+|+||||+||++++++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEe
Confidence 378999999986 787777532 346899999999999999999999 899999999999999999999999
Q ss_pred ecccCcccccCCce--e---eec---cccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHH
Q 048535 257 GDFGLAKMHHHGQV--M---SGR---RPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGL 324 (409)
Q Consensus 257 ~DFGla~~~~~~~~--~---~g~---~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~ 324 (409)
+|||++........ . .+. .+.+ ....+...|+|+++ ..+++++...... ...+....+..+..
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG--~~~~el~~g~~~~---~~~~~~~~~~~~~~ 232 (302)
T cd07864 158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG--CILGELFTKKPIF---QANQELAQLELISR 232 (302)
T ss_pred CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHH--HHHHHHHhCCCCC---CCCChHHHHHHHHH
Confidence 99999986543220 0 011 1111 12345678999986 3455555543322 12234455666777
Q ss_pred HccCcCCCCCCCHHHHHHHHh---------cCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 325 LCAHPEANSRPTIRQVLKMLE---------GQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 325 ~Cl~~dP~~RPt~~evl~~L~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
.|....|..+|.+.+....-. ...+.... -+..-.+++.+|+..+|..|.++.+++.||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 233 LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSF-IPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HhCCCChhhcccccccccccccccccccccchhhhcCC-CCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 888888888887765432210 00000000 12234799999999999999999999999997
No 307
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-30 Score=266.38 Aligned_cols=235 Identities=25% Similarity=0.415 Sum_probs=185.6
Q ss_pred HHHHhCCCCccceeecCCceEEEEEEEC---------CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeE
Q 048535 108 IHAATKGFSEENVIGLGGNGKVYKGQLL---------GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGW 176 (409)
Q Consensus 108 l~~~~~~f~~~~~lG~G~fg~Vy~~~~~---------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~ 176 (409)
++...++..+.+.||+|.||.|++|... ...||||.++.. ...+.+.+..|+++|+.+ +|+||+.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 4444556667779999999999999865 246999999865 446678899999999999 79999999999
Q ss_pred EEccCCeEEEEEEeCCCCCHHHHHhcCC------C-----C--CCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCC
Q 048535 177 CKKEKESLILIYDYMENGSLDKWIFECD------E-----S--IALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKA 243 (409)
Q Consensus 177 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~------~-----~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp 243 (409)
|.. ++..++|+||+..|+|.+||+..+ . . ..++....+.++.|||.||+||+ +.++|||||.+
T Consensus 371 ~t~-~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAa 446 (609)
T KOG0200|consen 371 CTQ-DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAA 446 (609)
T ss_pred ecc-CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhh
Confidence 998 788999999999999999998654 0 0 23899999999999999999999 89999999999
Q ss_pred CCeeeCCCCcEEEecccCcccccCCceee---e--ccccc--------cCCCcHHHHHHhhhcc-------------C-c
Q 048535 244 SNVLLDKKMNARLGDFGLAKMHHHGQVMS---G--RRPIE--------EGKRNLVDRMWSLTER-------------S-E 296 (409)
Q Consensus 244 ~NILl~~~~~~kl~DFGla~~~~~~~~~~---g--~~p~~--------~~~~~~~~~vws~~~~-------------~-~ 296 (409)
+|||++.+..+||+|||+||......... + +.|.. ...++..+|+|+++-- + .
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 99999999999999999999755543221 1 13432 2567888999998310 0 0
Q ss_pred -HHHHhhHHhhh--cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 297 -LLSVLDERLKA--KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 297 -~~~~~~~~l~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
..+++. .++. ..+.|..+..++.++++.||+.+|++||++.++++.++..
T Consensus 527 ~~~~l~~-~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 527 PTEELLE-FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred cHHHHHH-HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 111211 1211 1245566778899999999999999999999999999874
No 308
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=7.9e-30 Score=260.09 Aligned_cols=270 Identities=18% Similarity=0.216 Sum_probs=178.7
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC---CcEEEEE------------------EeccCChHHHHHHHHHHHHhccCCCC
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL---GVEVALK------------------RISLDSEHGMREFLAEVSSLGRLKHR 168 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~---~~~vAvK------------------~~~~~~~~~~~~~~~E~~~l~~l~H~ 168 (409)
...++|++.+.||+|+||+||+|..+ +..++.| .+. ........+.+|+.+|++++||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCC
Confidence 34578999999999999999998764 2222222 111 1223345688999999999999
Q ss_pred ceeeEeeEEEccCCeEEEEEEeCCCCCHHHHHhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCe
Q 048535 169 NLVGLRGWCKKEKESLILIYDYMENGSLDKWIFECDE--SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNV 246 (409)
Q Consensus 169 niv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NI 246 (409)
|||++++++.. .+..|+|+|++. ++|.+++..... .......+...++.||+.||.||| +++|+||||||+||
T Consensus 224 nIv~l~~~~~~-~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NI 298 (501)
T PHA03210 224 NILKIEEILRS-EANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENI 298 (501)
T ss_pred CcCcEeEEEEE-CCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHE
Confidence 99999999987 678899999995 588888754211 122345677889999999999999 89999999999999
Q ss_pred eeCCCCcEEEecccCcccccCCc-----eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCC---CC
Q 048535 247 LLDKKMNARLGDFGLAKMHHHGQ-----VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGG---YA 312 (409)
Q Consensus 247 Ll~~~~~~kl~DFGla~~~~~~~-----~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~---~~ 312 (409)
|++.++.+||+|||+++...... ...|...+ ....++...|+|+++ ..+++++...+..... .+
T Consensus 299 Ll~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG--vil~ell~~~~~p~~~~~~~~ 376 (501)
T PHA03210 299 FLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCG--LILLDMLSHDFCPIGDGGGKP 376 (501)
T ss_pred EECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHH--HHHHHHHHCCCCCccCCCCCH
Confidence 99999999999999998764322 11232222 124567889999997 4566666544321111 11
Q ss_pred HHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcC--C-CC-------CCCCCcchhHHhhhcccCCCCcccccccCC
Q 048535 313 DEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTE--G-TG-------LEDEGMNVHLLKRIGTRAMTSSWKFAGSRG 382 (409)
Q Consensus 313 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~--~-~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 382 (409)
.....++......|...-|.. ..++.+.+....- . .. ...+....+++.+|+..||.+|.++.+++.
T Consensus 377 ~~~~~~~~~~~~~~~~~~p~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 377 GKQLLKIIDSLSVCDEEFPDP---PCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHHHHhcccChhhcCCc---HHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 222222333222333222221 1223333221110 0 00 001112356788999999999999999999
Q ss_pred CCCccccc
Q 048535 383 HPTFNEIN 390 (409)
Q Consensus 383 hp~~~~~~ 390 (409)
||||+...
T Consensus 454 hp~f~~~~ 461 (501)
T PHA03210 454 LPLFSAEE 461 (501)
T ss_pred ChhhhcCC
Confidence 99998654
No 309
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=3e-29 Score=231.48 Aligned_cols=221 Identities=29% Similarity=0.430 Sum_probs=172.9
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
+|+..+.||+|++|.||++... +..+++|++........+.+.+|++.+++++|+|++++++++.. ....++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLK-KDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEec-CCeEEEEEecC
Confidence 4777899999999999999987 88999999987655566789999999999999999999999887 67899999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc--
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ-- 269 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-- 269 (409)
++++|.+++.... ..+++..+..++.|++.||.||| ..+++|+||+|+||++++++.++|+|||.+.......
T Consensus 80 ~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 154 (253)
T cd05122 80 SGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKAR 154 (253)
T ss_pred CCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeeccccccccccccc
Confidence 9999999986432 46899999999999999999999 8999999999999999999999999999998765542
Q ss_pred -eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhh----------------cCCCCHH--HHHHHHHHHH
Q 048535 270 -VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKA----------------KGGYADE--VVEKVLHLGL 324 (409)
Q Consensus 270 -~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~----------------~~~~~~~--~~~~l~~l~~ 324 (409)
...+...+ .....+...|+|+++ ..+++++...... ....... ....+.+++.
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG--~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 232 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLG--ITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLK 232 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHH--HHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHH
Confidence 22222111 112345668888874 1122222211110 0111111 2567899999
Q ss_pred HccCcCCCCCCCHHHHHH
Q 048535 325 LCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 325 ~Cl~~dP~~RPt~~evl~ 342 (409)
+||+.||++|||+.++++
T Consensus 233 ~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 233 KCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHccCChhhCCCHHHHhc
Confidence 999999999999999875
No 310
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=9e-30 Score=241.98 Aligned_cols=263 Identities=22% Similarity=0.285 Sum_probs=185.4
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccC-CeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK-ESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~~lv 187 (409)
++|+..+.||+|+||.||+|... ++.+|+|.++... ......+.+|+.++++++||||+++++++.... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 57888899999999999999987 7899999997542 222345778999999999999999999887622 789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+++ +|.+++.... ..+++..+..++.|++.||+||| +.+++|+||||+|||++.++.+||+|||+++....
T Consensus 85 ~e~~~~-~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVEH-DLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcCc-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 999975 9999886432 36899999999999999999999 88999999999999999999999999999986544
Q ss_pred Cc----eeeec---cccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCC
Q 048535 268 GQ----VMSGR---RPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPT 336 (409)
Q Consensus 268 ~~----~~~g~---~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt 336 (409)
.. ...+. .+.+ ....+..+|+|+++ ..+++++........... ...+.++...|..+.+...|.
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG--~~l~~l~~g~~~f~~~~~---~~~~~~~~~~~~~~~~~~~~~ 233 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVG--CIFAELLTKKPLFPGKSE---IDQLNKIFKLLGTPTEKIWPG 233 (293)
T ss_pred CccccccccccccccCchhhcCCccccchhhHHHHH--HHHHHHHhCCCCCCCCCh---HHHHHHHHHHhCCCchHHHHH
Confidence 31 00111 1111 11235678999986 345555554333222112 223344445555444444333
Q ss_pred HHHHHHHHhcCc----------CCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 337 IRQVLKMLEGQT----------EGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 337 ~~evl~~L~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
..++...-.... ..+.........+++.+|+..+|.+|++..+++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 234 FSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 322221110000 00000012234689999999999999999999999997
No 311
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=3.4e-29 Score=241.09 Aligned_cols=228 Identities=25% Similarity=0.337 Sum_probs=173.0
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
.|+..+.||+|+||.||++... +..||+|.+... .......+.+|++++++++|||++++++++.+ ....++||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 104 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-EHTAWLVM 104 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-CCeEEEEE
Confidence 3677889999999999999986 889999998643 33445678999999999999999999999987 67889999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
||+++ +|.+++... ...+++.++..++.|++.||.||| +.+|+||||+|+||+++.++.+||+|||++......
T Consensus 105 e~~~g-~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 105 EYCLG-SASDLLEVH--KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred eCCCC-CHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 99974 888877532 346899999999999999999999 899999999999999999999999999998766543
Q ss_pred ceeeecccc---c------cCCCcHHHHHHhhhccCcHHHHhhH---------------Hhhh--cCCCCHHHHHHHHHH
Q 048535 269 QVMSGRRPI---E------EGKRNLVDRMWSLTERSELLSVLDE---------------RLKA--KGGYADEVVEKVLHL 322 (409)
Q Consensus 269 ~~~~g~~p~---~------~~~~~~~~~vws~~~~~~~~~~~~~---------------~l~~--~~~~~~~~~~~l~~l 322 (409)
....|...+ + ...++...|+|+++. .+++++.. .... ...........+.++
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGv--il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 256 (317)
T cd06635 179 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI--TCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNF 256 (317)
T ss_pred ccccCCccccChhhhhcCCCCCCCccccHHHHHH--HHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHH
Confidence 322222211 1 133556778888731 11121111 1110 011123455678999
Q ss_pred HHHccCcCCCCCCCHHHHHHHHhcCcCC
Q 048535 323 GLLCAHPEANSRPTIRQVLKMLEGQTEG 350 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 350 (409)
+.+||+.+|.+||++.++++.+--....
T Consensus 257 i~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 257 VDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred HHHHccCCcccCcCHHHHHhChhhhccC
Confidence 9999999999999999999865544433
No 312
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.7e-30 Score=244.58 Aligned_cols=226 Identities=22% Similarity=0.313 Sum_probs=180.3
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
..-|+.++.||+|-|+.|-++++. |..||||++.+. +.-....+.+|++.|+.++|||||++|.+... ...+|||
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDT-QTKlyLi 95 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT-QTKLYLI 95 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcc-cceEEEE
Confidence 355788899999999999999875 999999999765 33345678899999999999999999998876 7899999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeC-CCCcEEEecccCccccc
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLD-KKMNARLGDFGLAKMHH 266 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~-~~~~~kl~DFGla~~~~ 266 (409)
+|.-++|+|++||.++.. .+.+....+++.||+.|+.|+| +..+|||||||+||.+- .-|-+||+|||++..+.
T Consensus 96 LELGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EEecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 999999999999977543 5899999999999999999999 88999999999999885 45789999999998887
Q ss_pred CCc---eeeecccccc------CCC-cHHHHHHhhhc-----------------cCcHHHHhhHHhhhcCCCCHHHHHHH
Q 048535 267 HGQ---VMSGRRPIEE------GKR-NLVDRMWSLTE-----------------RSELLSVLDERLKAKGGYADEVVEKV 319 (409)
Q Consensus 267 ~~~---~~~g~~p~~~------~~~-~~~~~vws~~~-----------------~~~~~~~~~~~l~~~~~~~~~~~~~l 319 (409)
.++ ..+|...+.. +.| ....|+|+++. .+.+..++|... ..|.....++
T Consensus 171 PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY----tvPshvS~eC 246 (864)
T KOG4717|consen 171 PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY----TVPSHVSKEC 246 (864)
T ss_pred CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc----cCchhhhHHH
Confidence 775 3445544432 333 35679999831 111222333222 3466778889
Q ss_pred HHHHHHccCcCCCCCCCHHHHHHH--HhcC
Q 048535 320 LHLGLLCAHPEANSRPTIRQVLKM--LEGQ 347 (409)
Q Consensus 320 ~~l~~~Cl~~dP~~RPt~~evl~~--L~~~ 347 (409)
.+|+..|+..||.+|.+.+|++.. |+..
T Consensus 247 rdLI~sMLvRdPkkRAslEeI~s~~Wlq~~ 276 (864)
T KOG4717|consen 247 RDLIQSMLVRDPKKRASLEEIVSTSWLQAG 276 (864)
T ss_pred HHHHHHHHhcCchhhccHHHHhccccccCC
Confidence 999999999999999999998753 4443
No 313
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.97 E-value=4.9e-30 Score=239.05 Aligned_cols=147 Identities=29% Similarity=0.356 Sum_probs=132.0
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
+|+..+.||.|+||.||+|... ++.||+|.+... .....+.+.+|++++++++||||+++++.+.. ....++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD-EENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC-CCeEEEEE
Confidence 4788899999999999999987 899999999754 23456789999999999999999999998876 77899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
||+++++|.+++.. ...+++..+..++.|+++||.||| +.+++|+||||+||++++++.++|+|||++.....
T Consensus 80 e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 152 (258)
T cd05578 80 DLLLGGDLRYHLSQ---KVKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTP 152 (258)
T ss_pred eCCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence 99999999999954 257899999999999999999999 88999999999999999999999999999876544
No 314
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=9.8e-30 Score=236.98 Aligned_cols=139 Identities=25% Similarity=0.384 Sum_probs=124.9
Q ss_pred eecCCceEEEEEEEC--CcEEEEEEeccCCh---HHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCC
Q 048535 121 IGLGGNGKVYKGQLL--GVEVALKRISLDSE---HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGS 195 (409)
Q Consensus 121 lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gs 195 (409)
||+|+||.||+++.. ++.+|+|.+..... ...+.+.+|++++++++||||+++++.+.. ....+++|||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG-KKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec-CcEEEEEEecCCCCc
Confidence 689999999999997 89999999975532 456678999999999999999999998876 778999999999999
Q ss_pred HHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 196 LDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 196 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
|.+++... ..+++..+..++.|+++||+||| +.+++|+||+|+||++++++.+||+|||++....
T Consensus 80 L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~ 144 (265)
T cd05579 80 LASLLENV---GSLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGL 144 (265)
T ss_pred HHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcc
Confidence 99999642 36899999999999999999999 8999999999999999999999999999987643
No 315
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=1.5e-29 Score=245.53 Aligned_cols=147 Identities=31% Similarity=0.471 Sum_probs=127.9
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC----CeE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK----ESL 184 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~ 184 (409)
+++|++.+.||+|+||.||+|... |+.||+|.+... .......+.+|+.++++++||||+++++++.... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 478999999999999999999886 899999998643 3334567889999999999999999999876422 357
Q ss_pred EEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 185 ILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
++++||+++ +|.+++. ...+++..+..++.|+++||.||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 84 ~lv~e~~~~-~l~~~~~----~~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 84 YIVQELMET-DLYKLIK----TQHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEehhccc-CHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceee
Confidence 999999975 8888873 246999999999999999999999 89999999999999999999999999999976
Q ss_pred cc
Q 048535 265 HH 266 (409)
Q Consensus 265 ~~ 266 (409)
..
T Consensus 156 ~~ 157 (336)
T cd07849 156 AD 157 (336)
T ss_pred cc
Confidence 54
No 316
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=2.9e-29 Score=237.03 Aligned_cols=181 Identities=28% Similarity=0.401 Sum_probs=142.8
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
|+..+.||.|++|.||+|... |..||+|++.... ......+.+|++++++++|||++++++++.+ .+..+++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~-~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS-ENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc-CCeEEEEEec
Confidence 567889999999999999986 8999999997542 2234578899999999999999999999987 6789999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV 270 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 270 (409)
++ ++|.+++.... ...+++..+..++.|+++||+||| +++++|+||+|+||+++.++.++|+|||+++.......
T Consensus 80 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 80 LD-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred cC-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 95 69999986432 236899999999999999999999 78999999999999999999999999999976532210
Q ss_pred -------eeeccccc---c-CCCcHHHHHHhhhccCcHHHHhhH
Q 048535 271 -------MSGRRPIE---E-GKRNLVDRMWSLTERSELLSVLDE 303 (409)
Q Consensus 271 -------~~g~~p~~---~-~~~~~~~~vws~~~~~~~~~~~~~ 303 (409)
.....+.+ . ..++..+|+|+++ ..+++++..
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG--~~l~~l~~g 196 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIG--CIFAEMVNR 196 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHH--HHHHHHHhC
Confidence 00011111 1 2346679999985 234444443
No 317
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=3.4e-29 Score=233.90 Aligned_cols=165 Identities=25% Similarity=0.313 Sum_probs=136.4
Q ss_pred eecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCC
Q 048535 121 IGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGS 195 (409)
Q Consensus 121 lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gs 195 (409)
||.|+||.||++... ++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+ +...++++||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD-KKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc-CCccEEEEecCCCCc
Confidence 699999999999998 8999999996542 2345679999999999999999999999887 678999999999999
Q ss_pred HHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---eee
Q 048535 196 LDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ---VMS 272 (409)
Q Consensus 196 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~---~~~ 272 (409)
|.+++.. ...+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||+++...... ...
T Consensus 80 L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~ 153 (262)
T cd05572 80 LWTILRD---RGLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFC 153 (262)
T ss_pred HHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccccccccc
Confidence 9999954 345899999999999999999999 8999999999999999999999999999998765431 111
Q ss_pred ecc---c---cccCCCcHHHHHHhhh
Q 048535 273 GRR---P---IEEGKRNLVDRMWSLT 292 (409)
Q Consensus 273 g~~---p---~~~~~~~~~~~vws~~ 292 (409)
|.. + .....++...|+|+++
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG 179 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLG 179 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhH
Confidence 111 1 1123345667888874
No 318
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=1.4e-29 Score=245.15 Aligned_cols=178 Identities=22% Similarity=0.369 Sum_probs=143.3
Q ss_pred HHHHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCC
Q 048535 107 EIHAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE 182 (409)
Q Consensus 107 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 182 (409)
++...+++|+..+.||.|+||.||++... ++.||+|++... .....+.+.+|++++++++||||+++++++.....
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 34557889999999999999999999876 889999988543 23345678899999999999999999999876566
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 183 SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
..++++||+ +++|.+++.. ..+++.....++.|+++||.||| +.+|+||||||+|||+++++.+||+|||++
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccc
Confidence 789999998 5699988842 35788889999999999999999 899999999999999999999999999999
Q ss_pred ccccCCc-eeee---ccccc---c-CCCcHHHHHHhhh
Q 048535 263 KMHHHGQ-VMSG---RRPIE---E-GKRNLVDRMWSLT 292 (409)
Q Consensus 263 ~~~~~~~-~~~g---~~p~~---~-~~~~~~~~vws~~ 292 (409)
+...... ...+ ..+.+ . ..++...|+|+++
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 193 (328)
T cd07856 156 RIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAG 193 (328)
T ss_pred cccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHH
Confidence 7654321 0011 11111 1 3456789999974
No 319
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=2.6e-29 Score=238.21 Aligned_cols=219 Identities=21% Similarity=0.271 Sum_probs=164.6
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
.|...+.||+|++|.||++... ++.+++|++........+.+.+|+.+++.++||||+++++++.. .+..++++||+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~-~~~~~~v~e~~ 98 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLV-GDELWVVMEFL 98 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEc-CCeEEEEEecc
Confidence 3555679999999999999875 78999999876655556778999999999999999999999886 67899999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc--
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ-- 269 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-- 269 (409)
++++|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 99 ~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~ 171 (285)
T cd06648 99 EGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR 171 (285)
T ss_pred CCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc
Confidence 99999999853 45899999999999999999999 8999999999999999999999999999887543221
Q ss_pred --eeeeccc---cc---cCCCcHHHHHHhhhccCcHHHHhhHH---------------hhhc---CCCCHHHHHHHHHHH
Q 048535 270 --VMSGRRP---IE---EGKRNLVDRMWSLTERSELLSVLDER---------------LKAK---GGYADEVVEKVLHLG 323 (409)
Q Consensus 270 --~~~g~~p---~~---~~~~~~~~~vws~~~~~~~~~~~~~~---------------l~~~---~~~~~~~~~~l~~l~ 323 (409)
...|... .+ ...++...|+|+++ ..+++++... .... ..........+.+++
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG--v~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 249 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLG--IMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFL 249 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHH--HHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHH
Confidence 0111111 11 12345667888874 1112221111 1000 001112345678888
Q ss_pred HHccCcCCCCCCCHHHHHH
Q 048535 324 LLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 324 ~~Cl~~dP~~RPt~~evl~ 342 (409)
.+||+.+|++|||+.++++
T Consensus 250 ~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 250 DRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHcccChhhCcCHHHHcc
Confidence 8888888888888888775
No 320
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.96 E-value=4.4e-29 Score=231.34 Aligned_cols=220 Identities=23% Similarity=0.373 Sum_probs=172.8
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccC--CeEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK--ESLILI 187 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~~lv 187 (409)
+|+..+.||+|++|.||+|... ++.|++|.+.... ....+.+.+|+.++++++||||+++++.+.. . ...+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERD-EEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEec-CCCCeEEEE
Confidence 4777899999999999999987 8899999997653 3556789999999999999999999999887 5 689999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
+||+++++|.+++... ..+++..+..++.|+++||.||| +.+++|+||+|+||+++.++.++|+|||.+.....
T Consensus 80 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 80 LEYVSGGSLSSLLKKF---GKLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 9999999999999543 37999999999999999999999 89999999999999999999999999999987654
Q ss_pred Cce------eeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhh------------------hcCCCCHHHHH
Q 048535 268 GQV------MSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLK------------------AKGGYADEVVE 317 (409)
Q Consensus 268 ~~~------~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~------------------~~~~~~~~~~~ 317 (409)
... ..+...+ .....+...|+|+++. .+++++..... .....+.....
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~--il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGC--TVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSE 231 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHH--HHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCH
Confidence 321 1111111 1123566788888741 12222221110 11223444567
Q ss_pred HHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 318 KVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 318 ~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.+.+++.+|++.||++||++.++++
T Consensus 232 ~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 232 EAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHHHHHHHhCcCChhhCCCHHHHhh
Confidence 8889999999999999999999875
No 321
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.96 E-value=6.7e-29 Score=234.15 Aligned_cols=171 Identities=22% Similarity=0.266 Sum_probs=134.6
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCC-CCceeeEeeEEEcc-CCeEEEEEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLK-HRNLVGLRGWCKKE-KESLILIYD 189 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~-~~~~~lv~E 189 (409)
|+..+.||+|+||.||+|... +..||+|+++.. .........+|+.++.++. |+||+++++++.+. .+..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567789999999999999986 889999998754 2222234567999999985 99999999999863 167899999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|++ |+|.+++... ...+++..+..++.|++.||.||| +.+++||||||+||+++. +.+||+|||+++......
T Consensus 81 ~~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 81 LMD-MNLYELIKGR--KRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred cCC-ccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 997 5888888542 246899999999999999999999 899999999999999999 999999999998654322
Q ss_pred e---eeecc---ccc----cCCCcHHHHHHhhh
Q 048535 270 V---MSGRR---PIE----EGKRNLVDRMWSLT 292 (409)
Q Consensus 270 ~---~~g~~---p~~----~~~~~~~~~vws~~ 292 (409)
. ..+.. +.+ ....+..+|+|+++
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 186 (282)
T cd07831 154 PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVG 186 (282)
T ss_pred CcCCCCCCcccCChhHhhcCCCCCcchhHHHHH
Confidence 1 11111 111 12346678999985
No 322
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.96 E-value=3.7e-29 Score=239.78 Aligned_cols=267 Identities=24% Similarity=0.276 Sum_probs=185.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCCh--HHHHHHHHHHHHhccCCCCceeeEeeEEEccC-CeEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSE--HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK-ESLIL 186 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~~l 186 (409)
.++|+..+.||+|+||.||+|... |+.||+|.++.... .....+.+|+.++++++|+||+++++++.... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467999999999999999999986 89999999975422 22335678999999999999999999987533 56899
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
||||+.+ +|.+++... ...+++.++..++.|+++||.||| +.+++||||||+||++++++.+||+|||+++...
T Consensus 86 v~e~~~~-~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 86 VMEYCEQ-DLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEecCCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 9999975 898888543 256899999999999999999999 8999999999999999999999999999998754
Q ss_pred CCc-eee------eccccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCC
Q 048535 267 HGQ-VMS------GRRPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRP 335 (409)
Q Consensus 267 ~~~-~~~------g~~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 335 (409)
... ..+ ...+.+ ...++...|+|+++ ..+++++......... .....+..+...+-.......|
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG--~il~el~~g~~~f~~~---~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07845 160 LPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVG--CILAELLAHKPLLPGK---SEIEQLDLIIQLLGTPNESIWP 234 (309)
T ss_pred CccCCCCcccccccccChhhhcCCCCcCchHHHHHHH--HHHHHHHhCCCCCCCC---CHHHHHHHHHHhcCCCChhhch
Confidence 321 000 011111 12356789999996 4455555544322111 1122233333333223333333
Q ss_pred CHHHHHHHHhcCcCCCC---------CCCCCcchhHHhhhcccCCCCcccccccCCCCCccccc
Q 048535 336 TIRQVLKMLEGQTEGTG---------LEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEIN 390 (409)
Q Consensus 336 t~~evl~~L~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~ 390 (409)
...++-. ......... ........+++.+|+..+|.+|++..+++.||||....
T Consensus 235 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 235 GFSDLPL-VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred hhhcccc-cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence 2222111 000000000 00122237899999999999999999999999997543
No 323
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.96 E-value=1.6e-29 Score=245.54 Aligned_cols=227 Identities=22% Similarity=0.288 Sum_probs=169.3
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC----Ce
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK----ES 183 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~ 183 (409)
.++|...+.||+|+||.||+|... ++.||||.+... .......+.+|+.+++.++|+||+++++++.... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457889999999999999999986 899999998653 3334567788999999999999999999886422 34
Q ss_pred EEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcc
Q 048535 184 LILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAK 263 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 263 (409)
.++||||+. ++|.+++.. ...+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS---SQTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 799999996 699998843 356999999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCc----eeeeccc---cc----cCCCcHHHHHHhhhccCcHHHHhhHHhhh-------------------------
Q 048535 264 MHHHGQ----VMSGRRP---IE----EGKRNLVDRMWSLTERSELLSVLDERLKA------------------------- 307 (409)
Q Consensus 264 ~~~~~~----~~~g~~p---~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~------------------------- 307 (409)
...... ...+... .+ ....+...|+|+++. .+++++......
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~--il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07858 157 TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGC--IFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLG 234 (337)
T ss_pred ccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHH--HHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 654331 1111111 11 123556788888731 111111110000
Q ss_pred ----------------cC-----CCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH--HhcC
Q 048535 308 ----------------KG-----GYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKM--LEGQ 347 (409)
Q Consensus 308 ----------------~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~ 347 (409)
.. .........+.+++.+||+.+|++|||++++++. ++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 235 FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 00 0011234667899999999999999999999876 5443
No 324
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=4.2e-29 Score=235.52 Aligned_cols=212 Identities=24% Similarity=0.319 Sum_probs=157.3
Q ss_pred eecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCC
Q 048535 121 IGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGS 195 (409)
Q Consensus 121 lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gs 195 (409)
||+|+||+||++... |+.||+|.+.... ......+..|++++++++||||+++++++.. .+..|+||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET-KDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec-CCeEEEEEecCCCCc
Confidence 699999999999876 8999999986432 2234567889999999999999999999887 678999999999999
Q ss_pred HHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee---e
Q 048535 196 LDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM---S 272 (409)
Q Consensus 196 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~---~ 272 (409)
|.+++.... ...+++..+..++.|++.||.||| +.+++||||||+||++++++.+||+|||++......... .
T Consensus 80 L~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 155 (277)
T cd05577 80 LKYHIYNVG-EPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRA 155 (277)
T ss_pred HHHHHHHcC-cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccccc
Confidence 999996532 246899999999999999999999 899999999999999999999999999998765432111 1
Q ss_pred ec---ccc---ccCCCcHHHHHHhhhccCcHHHHhhHHhhh-------------------cCCCCHHHHHHHHHHHHHcc
Q 048535 273 GR---RPI---EEGKRNLVDRMWSLTERSELLSVLDERLKA-------------------KGGYADEVVEKVLHLGLLCA 327 (409)
Q Consensus 273 g~---~p~---~~~~~~~~~~vws~~~~~~~~~~~~~~l~~-------------------~~~~~~~~~~~l~~l~~~Cl 327 (409)
+. .+. ....++...|+|+++ ..+++++...... ....+......+.+++.+||
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG--~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 233 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALG--CTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALL 233 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHH--HHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHc
Confidence 11 111 123356678999874 1222332222111 11122233456677777777
Q ss_pred CcCCCCCCCHHH
Q 048535 328 HPEANSRPTIRQ 339 (409)
Q Consensus 328 ~~dP~~RPt~~e 339 (409)
+.||++||++++
T Consensus 234 ~~~p~~R~~~~~ 245 (277)
T cd05577 234 QKDPEKRLGCRG 245 (277)
T ss_pred cCChhHccCCCc
Confidence 777777774444
No 325
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.96 E-value=6.1e-29 Score=235.45 Aligned_cols=224 Identities=24% Similarity=0.366 Sum_probs=172.3
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
..++.|+..+.||+|+||.||+|.+. +..||+|.+..... ..+.+.+|++++++++|+|++++++.+.. ....+++
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv 93 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLV-GDELWVV 93 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEE-CCEEEEE
Confidence 45677888899999999999999997 88999999976544 56778999999999999999999999987 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
+||+++++|.+++.... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++.....
T Consensus 94 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 94 MEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred EeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence 99999999999996532 36999999999999999999999 89999999999999999999999999998865433
Q ss_pred Cc----eeeec---ccc---ccCCCcHHHHHHhhhccCcHHHHhhHH---------------hh-hcC--CCCHHHHHHH
Q 048535 268 GQ----VMSGR---RPI---EEGKRNLVDRMWSLTERSELLSVLDER---------------LK-AKG--GYADEVVEKV 319 (409)
Q Consensus 268 ~~----~~~g~---~p~---~~~~~~~~~~vws~~~~~~~~~~~~~~---------------l~-~~~--~~~~~~~~~l 319 (409)
.. ...+. .+. ....++...|+|+++. .+++++... .. ... .........+
T Consensus 169 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGv--il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 246 (286)
T cd06614 169 EKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGI--MCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEF 246 (286)
T ss_pred chhhhccccCCcccCCHhHhcCCCCCCccccHHHHH--HHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHH
Confidence 21 11111 111 1123455678887641 111111110 00 000 1112245678
Q ss_pred HHHHHHccCcCCCCCCCHHHHHH
Q 048535 320 LHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 320 ~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.+++.+||+.+|.+|||+.++++
T Consensus 247 ~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 247 KDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred HHHHHHHhccChhhCcCHHHHhh
Confidence 89999999999999999999975
No 326
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.96 E-value=1.2e-28 Score=240.88 Aligned_cols=266 Identities=19% Similarity=0.233 Sum_probs=179.9
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC-----
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK----- 181 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----- 181 (409)
..++|+..+.||+|+||.||+|... ++.||+|.+... .......+.+|+.++++++||||+++++++....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4588999999999999999999986 899999998643 3344567889999999999999999999886422
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccC
Q 048535 182 ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGL 261 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 261 (409)
...++||||+++ +|.+++.. .+++..+..++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQM-----DLDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCcc
Confidence 357999999965 89888742 2889999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCcee---eecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcC---------------CCCHHHHH
Q 048535 262 AKMHHHGQVM---SGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAKG---------------GYADEVVE 317 (409)
Q Consensus 262 a~~~~~~~~~---~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~---------------~~~~~~~~ 317 (409)
++........ .+...+ ....++...|+|+++ ..+++++........ ..+.+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG--~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 165 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG--CIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred ceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHH--HHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9876543211 111111 123456778999985 334444433322111 11111111
Q ss_pred HHHHHHHHccCcCCCCCC-CHHHHHHHHhcCcCCCC--CCCCCcchhHHhhhcccCCCCcccccccCCCCCcc
Q 048535 318 KVLHLGLLCAHPEANSRP-TIRQVLKMLEGQTEGTG--LEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFN 387 (409)
Q Consensus 318 ~l~~l~~~Cl~~dP~~RP-t~~evl~~L~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~ 387 (409)
.+........+..|..++ ...++............ ........+++.+|+..+|.+|++..+++.|||+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~ 315 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN 315 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence 111111111121221111 12222111100000000 01111237899999999999999999999999886
No 327
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.96 E-value=2.4e-29 Score=236.69 Aligned_cols=148 Identities=27% Similarity=0.376 Sum_probs=131.8
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCC-CCceeeEeeEEEccCCeEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLK-HRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~l 186 (409)
++|...+.||+|+||.||+|... +..||+|++... .....+.+.+|+.++++++ ||||+++++++.. .+..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-~~~~~l 79 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD-EENLYF 79 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcC-CceEEE
Confidence 46888999999999999999986 899999998653 2334567889999999998 9999999998876 678999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
||||+++++|.+++.. ...+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++....
T Consensus 80 v~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 80 VLEYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 9999999999999954 336999999999999999999999 8999999999999999999999999999987654
Q ss_pred C
Q 048535 267 H 267 (409)
Q Consensus 267 ~ 267 (409)
.
T Consensus 154 ~ 154 (280)
T cd05581 154 P 154 (280)
T ss_pred C
Confidence 3
No 328
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.96 E-value=3.1e-29 Score=243.36 Aligned_cols=148 Identities=28% Similarity=0.409 Sum_probs=128.3
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEcc-CCeE
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKE-KESL 184 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~-~~~~ 184 (409)
..++|+..+.||+|+||.||+|.+. ++.+|+|++... .......+.+|+.+++++ +||||+++++++... ....
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3567888999999999999999986 789999998542 334456678899999999 999999999988653 3468
Q ss_pred EEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 185 ILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
++||||++ ++|.+++.. ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 85 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRA----NILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 99999997 599999843 26889999999999999999999 89999999999999999999999999999986
Q ss_pred cc
Q 048535 265 HH 266 (409)
Q Consensus 265 ~~ 266 (409)
..
T Consensus 157 ~~ 158 (337)
T cd07852 157 LS 158 (337)
T ss_pred cc
Confidence 54
No 329
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=4.2e-29 Score=237.72 Aligned_cols=215 Identities=21% Similarity=0.266 Sum_probs=159.5
Q ss_pred cceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCC
Q 048535 118 ENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGS 195 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gs 195 (409)
...||+|+||.||++... +..||+|++..........+.+|+.+++.++|+||+++++++.. .+..++||||+++++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~ 103 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGA 103 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEe-CCEEEEEEecCCCCc
Confidence 367999999999999885 88999999876555566779999999999999999999999987 678999999999999
Q ss_pred HHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc----ee
Q 048535 196 LDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ----VM 271 (409)
Q Consensus 196 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~----~~ 271 (409)
|.+++.. ..+++.....++.|++.||+||| +.+++|+||||+||+++.++.++|+|||++....... ..
T Consensus 104 L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~ 176 (292)
T cd06657 104 LTDIVTH----TRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 176 (292)
T ss_pred HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccccccccc
Confidence 9998732 35899999999999999999999 8899999999999999999999999999986543221 11
Q ss_pred eecc---cc---ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcC------------------CCCHHHHHHHHHHHHHcc
Q 048535 272 SGRR---PI---EEGKRNLVDRMWSLTERSELLSVLDERLKAKG------------------GYADEVVEKVLHLGLLCA 327 (409)
Q Consensus 272 ~g~~---p~---~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~------------------~~~~~~~~~l~~l~~~Cl 327 (409)
.|.. +. ....++...|+|+++ ..+++++........ .........+.+++.+||
T Consensus 177 ~~~~~y~~pE~~~~~~~~~~~Dv~slG--vil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 254 (292)
T cd06657 177 VGTPYWMAPELISRLPYGPEVDIWSLG--IMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLL 254 (292)
T ss_pred ccCccccCHHHhcCCCCCchhhHHHHH--HHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHH
Confidence 2211 11 123446778999984 222333322111000 011122344556666666
Q ss_pred CcCCCCCCCHHHHHH
Q 048535 328 HPEANSRPTIRQVLK 342 (409)
Q Consensus 328 ~~dP~~RPt~~evl~ 342 (409)
+.+|.+||++.++++
T Consensus 255 ~~~P~~R~~~~~ll~ 269 (292)
T cd06657 255 VRDPAQRATAAELLK 269 (292)
T ss_pred hCCcccCcCHHHHhc
Confidence 666666666666654
No 330
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.96 E-value=4.7e-29 Score=231.54 Aligned_cols=225 Identities=20% Similarity=0.301 Sum_probs=171.9
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|++.+.||+|+||.||++... ++.+|+|.+... .......+.+|+.++++++|+||+++++++.+ ....++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD-GNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc-CCEEEEEeh
Confidence 4778899999999999999876 789999998754 34456678899999999999999999999887 678999999
Q ss_pred eCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 190 YMENGSLDKWIFECD-ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
|+++++|.+++.... ....+++..+..++.|++.||.||| +.+++|+||+|+||++++++.+||+|||+++.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 999999999986521 2356899999999999999999999 899999999999999999999999999999876543
Q ss_pred cee--eec------cccccCCCcHHHHHHhhhcc-------------CcHHHHhhHHhh-hcCCCCHHHHHHHHHHHHHc
Q 048535 269 QVM--SGR------RPIEEGKRNLVDRMWSLTER-------------SELLSVLDERLK-AKGGYADEVVEKVLHLGLLC 326 (409)
Q Consensus 269 ~~~--~g~------~p~~~~~~~~~~~vws~~~~-------------~~~~~~~~~~l~-~~~~~~~~~~~~l~~l~~~C 326 (409)
... .+. .......++...|+|+++.- ....+....... .....+......+.+++.+|
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 236 (256)
T cd08530 157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSM 236 (256)
T ss_pred CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHH
Confidence 100 011 01112334556888887310 111111111111 01223345667899999999
Q ss_pred cCcCCCCCCCHHHHHH
Q 048535 327 AHPEANSRPTIRQVLK 342 (409)
Q Consensus 327 l~~dP~~RPt~~evl~ 342 (409)
|+.+|++|||+.++++
T Consensus 237 l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 237 LQVKPKLRPNCDKILA 252 (256)
T ss_pred cCCCcccCCCHHHHhc
Confidence 9999999999999976
No 331
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96 E-value=4.2e-29 Score=233.03 Aligned_cols=167 Identities=23% Similarity=0.301 Sum_probs=132.5
Q ss_pred ceeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHh-ccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSL-GRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.||+|+||.||+|... ++.||+|.++... ......+..|..++ ...+|+|++++++++.. ++..++|+||++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~ 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS-KDYLYLVMEYLN 80 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-CCeEEEEEeccC
Confidence 56899999999999986 8899999996542 22233455565544 45589999999999987 678999999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCceee
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVMS 272 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 272 (409)
+++|.+++.. ...+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||+++.........
T Consensus 81 ~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 154 (260)
T cd05611 81 GGDCASLIKT---LGGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFV 154 (260)
T ss_pred CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCC
Confidence 9999999954 346899999999999999999999 8999999999999999999999999999998654332222
Q ss_pred ecccc------ccCCCcHHHHHHhhh
Q 048535 273 GRRPI------EEGKRNLVDRMWSLT 292 (409)
Q Consensus 273 g~~p~------~~~~~~~~~~vws~~ 292 (409)
|...+ ....++...|+|+++
T Consensus 155 ~~~~y~~pe~~~~~~~~~~~Dv~slG 180 (260)
T cd05611 155 GTPDYLAPETILGVGDDKMSDWWSLG 180 (260)
T ss_pred CCcCccChhhhcCCCCcchhhhHHHH
Confidence 22211 123356778999874
No 332
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.96 E-value=1.2e-28 Score=228.57 Aligned_cols=225 Identities=28% Similarity=0.383 Sum_probs=170.9
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|+..+.||.|+||.||++... +..||+|++... .....+.+.+|+++++.++|||++++++.+.. ....++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE-KGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec-CCEEEEEEE
Confidence 4778899999999999999987 899999999765 23566789999999999999999999999887 688999999
Q ss_pred eCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 190 YMENGSLDKWIFECD-ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
|+++++|.+++.... ....+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 999999999996532 1357999999999999999999999 889999999999999999999999999999876543
Q ss_pred ce----eeecc---cc---ccCCCcHHHHHHhhhc-------------cCcHHHHhhHHhhh-cCCCCHHHHHHHHHHHH
Q 048535 269 QV----MSGRR---PI---EEGKRNLVDRMWSLTE-------------RSELLSVLDERLKA-KGGYADEVVEKVLHLGL 324 (409)
Q Consensus 269 ~~----~~g~~---p~---~~~~~~~~~~vws~~~-------------~~~~~~~~~~~l~~-~~~~~~~~~~~l~~l~~ 324 (409)
.. ..|.. +. .....+...|+|+++. .....++....... ....+......+.+++.
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (258)
T cd08215 157 VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVS 236 (258)
T ss_pred cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence 21 11111 11 1233455678888631 11111111111110 01222234467788888
Q ss_pred HccCcCCCCCCCHHHHHH
Q 048535 325 LCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 325 ~Cl~~dP~~RPt~~evl~ 342 (409)
+||+.+|++|||+.++++
T Consensus 237 ~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 237 SLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHcCCChhhCcCHHHHhc
Confidence 888888888888888875
No 333
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.96 E-value=5.6e-29 Score=234.95 Aligned_cols=147 Identities=25% Similarity=0.400 Sum_probs=127.6
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccCC-hHHHHHHHHHHHHhccCC-CCceeeEeeEEEccCCeEEEEEEe
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS-EHGMREFLAEVSSLGRLK-HRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
|++.+.||+|+||.||+|... ++.||+|++.... ........+|+..+++++ |+||+++++++.+ ++..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE-NDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc-CCcEEEEEec
Confidence 567789999999999999986 7889999986542 222334567999999998 9999999999987 7789999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
+ +|+|.+++.... ...+++..+..++.|++.||.||| +++++|+||||+||++++++.++|+|||+++....
T Consensus 80 ~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~ 151 (283)
T cd07830 80 M-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRS 151 (283)
T ss_pred C-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence 9 889999986532 346899999999999999999999 89999999999999999999999999999986544
No 334
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=8.2e-29 Score=234.12 Aligned_cols=166 Identities=24% Similarity=0.279 Sum_probs=129.0
Q ss_pred eeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhc---cCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 120 VIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLG---RLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 120 ~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~---~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
.||+|+||.||++... ++.+|+|.+.... ......+.+|..++. ..+||||+.+++++.. .+..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~ 79 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT-PDKLCFILDLM 79 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec-CCeEEEEEecC
Confidence 4899999999999986 8899999986541 122233445554433 4479999999998887 67889999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc--
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ-- 269 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-- 269 (409)
++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||+++++.+||+|||++.......
T Consensus 80 ~~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 153 (279)
T cd05633 80 NGGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 153 (279)
T ss_pred CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCcc
Confidence 99999999853 346999999999999999999999 8999999999999999999999999999987543221
Q ss_pred eeeecccc---c----cCCCcHHHHHHhhh
Q 048535 270 VMSGRRPI---E----EGKRNLVDRMWSLT 292 (409)
Q Consensus 270 ~~~g~~p~---~----~~~~~~~~~vws~~ 292 (409)
...|..++ + ...++..+|+|+++
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 183 (279)
T cd05633 154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLG 183 (279)
T ss_pred CcCCCcCccCHHHhcCCCCCCchhhhHHHH
Confidence 11122221 1 12356778999984
No 335
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.96 E-value=1.6e-29 Score=245.23 Aligned_cols=148 Identities=28% Similarity=0.433 Sum_probs=128.6
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc---CCeE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE---KESL 184 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~---~~~~ 184 (409)
..+|+..+.||+|+||.||+|... ++.||+|++... .....+.+.+|+.+|++++||||+++++++... ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 368888999999999999999886 899999998754 223456788999999999999999999987532 3468
Q ss_pred EEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 185 ILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
++||||+. |+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||+++.
T Consensus 84 ~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 84 YVVMDLME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred EEEEehhh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEeccccccee
Confidence 99999996 599998843 345999999999999999999999 89999999999999999999999999999976
Q ss_pred cc
Q 048535 265 HH 266 (409)
Q Consensus 265 ~~ 266 (409)
..
T Consensus 157 ~~ 158 (334)
T cd07855 157 LS 158 (334)
T ss_pred ec
Confidence 53
No 336
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.96 E-value=1.5e-28 Score=230.80 Aligned_cols=248 Identities=17% Similarity=0.152 Sum_probs=171.0
Q ss_pred HHHHHHhCCCCcccee--ecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEEcc
Q 048535 106 QEIHAATKGFSEENVI--GLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKE 180 (409)
Q Consensus 106 ~~l~~~~~~f~~~~~l--G~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 180 (409)
.+.....++|++.+.+ |+|+||.||++... +..+|+|.+....... .|+.....+ +||||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~- 80 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTT- 80 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEec-
Confidence 3444555677777776 99999999999986 7889999986542111 122222222 79999999999987
Q ss_pred CCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC-cEEEecc
Q 048535 181 KESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM-NARLGDF 259 (409)
Q Consensus 181 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~-~~kl~DF 259 (409)
.+..++||||+++|+|.+++... ..+++.++..++.|+++||.||| +.+++||||||+||+++.++ .++|+||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 67899999999999999999542 37999999999999999999999 88999999999999999998 9999999
Q ss_pred cCcccccCCceeeeccc---c---ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCC
Q 048535 260 GLAKMHHHGQVMSGRRP---I---EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANS 333 (409)
Q Consensus 260 Gla~~~~~~~~~~g~~p---~---~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~ 333 (409)
|+++.........|... . ....++...|+|+++ ..+++++....+...... +
T Consensus 155 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG--~il~~l~~g~~p~~~~~~--------------------~ 212 (267)
T PHA03390 155 GLCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVG--VLTYELLTGKHPFKEDED--------------------E 212 (267)
T ss_pred ccceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHH--HHHHHHHHCCCCCCCCCc--------------------c
Confidence 99987654432222221 1 124456778999985 334444443322111000 0
Q ss_pred CCCHHHHHHHHhcCcCCCCCCCCCcchhHHhhhcccCCCCccc-ccccCCCCCccc
Q 048535 334 RPTIRQVLKMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWK-FAGSRGHPTFNE 388 (409)
Q Consensus 334 RPt~~evl~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~hp~~~~ 388 (409)
-+...++..........+. ..+....+++.+|++.+|.+|++ +++++.||||..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 213 ELDLESLLKRQQKKLPFIK-NVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred hhhHHHHHHhhcccCCccc-ccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 0111222222211111111 11122378899999999999986 589999999863
No 337
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.96 E-value=3.4e-29 Score=242.18 Aligned_cols=278 Identities=21% Similarity=0.259 Sum_probs=195.2
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccC----CeEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK----ESLI 185 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~ 185 (409)
+|++.+.||+|+||.||+|... ++.||+|.+.... ....+.+.+|+.+++.++|+||+++++++.... ...|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788899999999999999986 7899999997542 445578999999999999999999999987633 3689
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
++|||+++ +|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.++|+|||++...
T Consensus 81 lv~e~~~~-~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELMET-DLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchhh-hHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 99999984 89999853 347999999999999999999999 899999999999999999999999999999876
Q ss_pred cCCce----e---eecc---ccc---cC-CCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCC
Q 048535 266 HHGQV----M---SGRR---PIE---EG-KRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEA 331 (409)
Q Consensus 266 ~~~~~----~---~g~~---p~~---~~-~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP 331 (409)
..... . .+.. +.+ .. ..+..+|+|+++ ..+++++............ +....+..++...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG--~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~ 227 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVG--CIFAELLTRKPLFPGRDYI----DQLNLIVEVLGTPS 227 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHH--HHHHHHHcCCCCcCCCCHH----HHHHHHHHhcCCCC
Confidence 54320 1 1111 111 12 456778999986 3445555443332222111 22222222222222
Q ss_pred CC---CCCHHHHHHHHhcCcCCCCC-------CCCCcchhHHhhhcccCCCCcccccccCCCCCccccccccCCCCCCcc
Q 048535 332 NS---RPTIRQVLKMLEGQTEGTGL-------EDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINKNRSSSPSLNA 401 (409)
Q Consensus 332 ~~---RPt~~evl~~L~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~~~~~s~~~~~ 401 (409)
.+ +.......+.+......... ..+....+++.+|+..+|..|.+..+++.||||..+.......+...+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~~~~~~~ 307 (330)
T cd07834 228 EEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEPVAKPP 307 (330)
T ss_pred hhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccCCCCCCc
Confidence 11 11222222232221111110 011223689999999999999999999999999998877666666665
Q ss_pred ccc
Q 048535 402 SDV 404 (409)
Q Consensus 402 ~~~ 404 (409)
.++
T Consensus 308 ~~~ 310 (330)
T cd07834 308 FDF 310 (330)
T ss_pred ccc
Confidence 554
No 338
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.96 E-value=9.6e-29 Score=236.29 Aligned_cols=262 Identities=23% Similarity=0.342 Sum_probs=181.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccC------
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK------ 181 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 181 (409)
.++|+..+.||+|+||.||+|... ++.||||.+.... ......+.+|+.++++++||||++++++|....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357899999999999999999986 8999999986442 222345678999999999999999999987532
Q ss_pred -CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEeccc
Q 048535 182 -ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFG 260 (409)
Q Consensus 182 -~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFG 260 (409)
...++||||+.+ +|.+++.. ....+++.++..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSN--KNVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCC
Confidence 346999999975 88888854 2236899999999999999999999 8899999999999999999999999999
Q ss_pred CcccccCCce-----e---ee---cccccc----CCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHH
Q 048535 261 LAKMHHHGQV-----M---SG---RRPIEE----GKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLL 325 (409)
Q Consensus 261 la~~~~~~~~-----~---~g---~~p~~~----~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~ 325 (409)
++........ . .+ ..+.+. ...+..+|+|+++ ..+++++............ ..+..+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG--~~l~el~t~~~~~~~~~~~---~~~~~~~~~ 239 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAG--CIMAEMWTRSPIMQGNTEQ---HQLTLISQL 239 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHH--HHHHHHHhCCCCCCCCCHH---HHHHHHHHH
Confidence 9976533210 0 01 111111 1245678999986 3455555443322222111 222223333
Q ss_pred ccCcCCCCCCCHHHHHHHHhcCcCCCC------------CCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 326 CAHPEANSRPTIRQVLKMLEGQTEGTG------------LEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 326 Cl~~dP~~RPt~~evl~~L~~~~~~~~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
|-...|...|....... .+.. ..+. ........+++.+|+..+|.+|++.++++.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 240 CGSITPEVWPGVDKLEL-FKKM-ELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hCCCChhhcccccchhh-hhhc-cCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 44444444444322111 1100 0000 0011223689999999999999999999999998
No 339
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.96 E-value=1.1e-28 Score=238.64 Aligned_cols=139 Identities=22% Similarity=0.256 Sum_probs=122.1
Q ss_pred ceeecC--CceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLG--GNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G--~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
..||+| +||+||++.+. |+.||+|.+... .....+.+.+|+.+++.++||||+++++++.. ++..++|+||++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT-GSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec-CCceEEEEeccc
Confidence 456776 99999999985 899999998754 33445788999999999999999999999987 678899999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
+|+|.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+|++|||.+
T Consensus 83 ~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~ 148 (328)
T cd08226 83 YGSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHL 148 (328)
T ss_pred CCCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHH
Confidence 999999986532 235899999999999999999999 899999999999999999999999999854
No 340
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.96 E-value=7.9e-29 Score=233.97 Aligned_cols=260 Identities=25% Similarity=0.353 Sum_probs=191.4
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCeEEEEEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KESLILIYD 189 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~~lv~E 189 (409)
|++.+.||+|+||.||+|... ++.+|+|.+... .......+.+|++++++++|+|++++++++... .+..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567789999999999999987 789999999765 233456788999999999999999999999873 278999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|+++ +|.+++... ...+++..+..++.|+++||+||| +.+++|+||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMDH-DLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred cccc-cHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 9985 999988542 246899999999999999999999 7899999999999999999999999999998664432
Q ss_pred --eeee------ccccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCH
Q 048535 270 --VMSG------RRPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTI 337 (409)
Q Consensus 270 --~~~g------~~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 337 (409)
..++ ..+.+ ...++...|+|+++ ..+++++........ ......+..+...|-..++..+|..
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG--~~l~el~t~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVG--CILAELFLGKPIFQG---STELEQLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHH--HHHHHHHhCCCCCCC---CChHHHHHHHHHHhCCCchhhcccc
Confidence 0111 11111 12356789999986 345555554433211 1223344555566777777777776
Q ss_pred HHHHHHHhcCcCCCC----------CCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 338 RQVLKMLEGQTEGTG----------LEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 338 ~evl~~L~~~~~~~~----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
.++..... ...... ...+....+++.+|+..+|.+|.+..+++.||||
T Consensus 230 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 230 SKLPWFEN-LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred ccchhhhh-ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 65422111 000000 0002234788999999999999999999999997
No 341
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.96 E-value=3.3e-29 Score=237.37 Aligned_cols=222 Identities=26% Similarity=0.358 Sum_probs=159.4
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCC-CCceeeEeeEEEccCCeEEEEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLK-HRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~lv~E 189 (409)
+|...+.||+|+||.||++... ++.||+|.+... .......+.+|+.++.++. |+||+++++++.. ....+++||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-~~~~~~~~e 83 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-EGDCWICME 83 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec-CCcEEEEEe
Confidence 4556688999999999999986 899999999754 2345567899999999995 9999999999887 667889999
Q ss_pred eCCCCCHHHHH---hcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 190 YMENGSLDKWI---FECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 190 ~~~~gsL~~~l---~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
|++. +|.++. .. .....+++..+..++.|++.||+|||+ ..+++||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~~-~l~~l~~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 84 LMDI-SLDKFYKYVYE-VLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred cccC-CHHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 9865 655443 22 123569999999999999999999994 3589999999999999999999999999997643
Q ss_pred CCc---eeeeccccc------c---CCCcHHHHHHhhhccCcHHHHhhHHhhhc---------------------CCCCH
Q 048535 267 HGQ---VMSGRRPIE------E---GKRNLVDRMWSLTERSELLSVLDERLKAK---------------------GGYAD 313 (409)
Q Consensus 267 ~~~---~~~g~~p~~------~---~~~~~~~~vws~~~~~~~~~~~~~~l~~~---------------------~~~~~ 313 (409)
... ...|..++. . ..++..+|+|+++ ..+++++....+.. .....
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG--~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd06616 160 DSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLG--ITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEER 237 (288)
T ss_pred cCCccccccCccCccCHHHhccccccCCcchhhhhHHH--HHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCC
Confidence 321 112222211 1 1456678999874 11222221111100 01111
Q ss_pred HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 314 EVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 314 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
.....+.+++.+||+.||++|||+.++++
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 238 EFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 24456777777788888888888777765
No 342
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.96 E-value=6.4e-29 Score=235.53 Aligned_cols=223 Identities=21% Similarity=0.250 Sum_probs=163.8
Q ss_pred CCCccceeecCCceEEEEEEEC-----CcEEEEEEeccCC----hHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCe
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL-----GVEVALKRISLDS----EHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKES 183 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 183 (409)
+|+..+.||+|+||.||++... ++.||||.++... ....+.+.+|+.++.++ +||||+++++.+.. +..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~-~~~ 79 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT-DTK 79 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec-CCE
Confidence 4777899999999999998753 6789999987432 23346788999999999 69999999998876 678
Q ss_pred EEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcc
Q 048535 184 LILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAK 263 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 263 (409)
.++||||+++|+|.+++.. ...+++..+..++.|+++||.||| +.+++||||||+||+++.++.++|+|||+++
T Consensus 80 ~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 80 LHLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECcccc
Confidence 8999999999999999853 346899999999999999999999 8999999999999999999999999999987
Q ss_pred cccCCc-----eeeeccccc------cC--CCcHHHHHHhhhccCcHHHHhhHHh-------------------hhcCCC
Q 048535 264 MHHHGQ-----VMSGRRPIE------EG--KRNLVDRMWSLTERSELLSVLDERL-------------------KAKGGY 311 (409)
Q Consensus 264 ~~~~~~-----~~~g~~p~~------~~--~~~~~~~vws~~~~~~~~~~~~~~l-------------------~~~~~~ 311 (409)
...... ...|...+. .. ..+...|+|+++. .+++++.... ......
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~--il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd05583 154 EFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGV--LTFELLTGASPFTVDGEQNSQSEISRRILKSKPPF 231 (288)
T ss_pred ccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHH--HHHHHHhCCCCcccCcccchHHHHHHHHHccCCCC
Confidence 643321 111221111 11 1356778888741 1222222111 111122
Q ss_pred CHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 048535 312 ADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 312 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
+......+.+++.+||+.||++|||+.++.+.|+
T Consensus 232 ~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 232 PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 2233456677777888888888888777766554
No 343
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.96 E-value=1.3e-28 Score=239.89 Aligned_cols=278 Identities=19% Similarity=0.275 Sum_probs=189.0
Q ss_pred ccccHHHHHHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeE
Q 048535 101 HRVSYQEIHAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGW 176 (409)
Q Consensus 101 ~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~ 176 (409)
++....++...+++|+..+.||+|+||.||+|... ++.||+|++... .....+.+.+|+.++++++||||++++++
T Consensus 5 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~ 84 (345)
T cd07877 5 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 84 (345)
T ss_pred hhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeee
Confidence 34455677788899999999999999999999875 889999999753 23345678899999999999999999998
Q ss_pred EEcc-----CCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC
Q 048535 177 CKKE-----KESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK 251 (409)
Q Consensus 177 ~~~~-----~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~ 251 (409)
+... ....+++++++ +++|.+++.. ..+++..+..++.|+++||+||| +.+|+||||||+||+++++
T Consensus 85 ~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~ 156 (345)
T cd07877 85 FTPARSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNED 156 (345)
T ss_pred eeecccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCC
Confidence 7642 13467888877 7799988742 35899999999999999999999 8999999999999999999
Q ss_pred CcEEEecccCcccccCCce-eeecc---ccc---c-CCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHH
Q 048535 252 MNARLGDFGLAKMHHHGQV-MSGRR---PIE---E-GKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLG 323 (409)
Q Consensus 252 ~~~kl~DFGla~~~~~~~~-~~g~~---p~~---~-~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~ 323 (409)
+.+||+|||+++....... ..+.. +.+ . ..++...|+|+++ ..+++++........... ...+..+.
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG--~il~el~~g~~pf~~~~~---~~~~~~~~ 231 (345)
T cd07877 157 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG--CIMAELLTGRTLFPGTDH---IDQLKLIL 231 (345)
T ss_pred CCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHH--HHHHHHHhCCCCCCCCCH---HHHHHHHH
Confidence 9999999999986543321 11111 111 1 2346678999986 344555544332211111 11122221
Q ss_pred HHccCcCCCCCC-----CHHHHHHHHhcCcCCCC----CCCCCcchhHHhhhcccCCCCcccccccCCCCCcccccc
Q 048535 324 LLCAHPEANSRP-----TIRQVLKMLEGQTEGTG----LEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINK 391 (409)
Q Consensus 324 ~~Cl~~dP~~RP-----t~~evl~~L~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~ 391 (409)
.......|..-+ ..+...+.+....+..- ...+....+++.+|+..+|.+|++..+++.||||.+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~ 308 (345)
T cd07877 232 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 308 (345)
T ss_pred HHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence 111111110000 11112222221111000 011223479999999999999999999999999997553
No 344
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.96 E-value=9.4e-29 Score=237.31 Aligned_cols=144 Identities=21% Similarity=0.195 Sum_probs=124.8
Q ss_pred ccceeecCCceEEEEEEECCcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCC
Q 048535 117 EENVIGLGGNGKVYKGQLLGVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENG 194 (409)
Q Consensus 117 ~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~g 194 (409)
+.+.+|.|+++.||++...++.||||+++.. .....+.+.+|+.+++.++|+||+++++++.+ .+..+++|||+++|
T Consensus 6 i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~-~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV-DSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec-CCeEEEEEeccCCC
Confidence 3455666777777777777999999999754 44566789999999999999999999999887 67899999999999
Q ss_pred CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 195 SLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 195 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
+|.+++.... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||.+...
T Consensus 85 ~l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~ 151 (314)
T cd08216 85 SCEDLLKTHF-PEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSM 151 (314)
T ss_pred CHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceee
Confidence 9999996532 235889999999999999999999 899999999999999999999999999988654
No 345
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.96 E-value=2e-28 Score=232.76 Aligned_cols=267 Identities=21% Similarity=0.294 Sum_probs=180.5
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
++|+..+.||+|++|.||+|... ++.||+|.+.... ....+.+.+|++++++++||||+++++++.+ ....++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-EKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec-CCeEEEEE
Confidence 56888999999999999999986 8899999986542 2334678899999999999999999999987 67899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC-CCcEEEecccCcccccC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK-KMNARLGDFGLAKMHHH 267 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~-~~~~kl~DFGla~~~~~ 267 (409)
||++ ++|.+++... ....+++..+..++.||+.||+||| +++++||||||+||+++. ++.+||+|||+++....
T Consensus 81 e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 81 EYLD-LDLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred eccc-ccHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 9996 5888887542 2334688889999999999999999 889999999999999985 55799999999976432
Q ss_pred Cce----ee---eccccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCC-C
Q 048535 268 GQV----MS---GRRPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSR-P 335 (409)
Q Consensus 268 ~~~----~~---g~~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R-P 335 (409)
... .. ...+.+ ...++...|+|+++ ..+++++........... ...+.++. .++...+..+ +
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG--~i~~~l~tg~~pf~~~~~---~~~~~~~~-~~~~~~~~~~~~ 229 (294)
T PLN00009 156 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVG--CIFAEMVNQKPLFPGDSE---IDELFKIF-RILGTPNEETWP 229 (294)
T ss_pred CccccccCceeecccCHHHHhCCCCCCcHHHHHHHH--HHHHHHHhCCCCCCCCCH---HHHHHHHH-HHhCCCChhhcc
Confidence 210 00 111111 12356789999986 345555554333211111 12222221 1221111111 1
Q ss_pred CHHHHHHHHhcCcCCC-------CCCCCCcchhHHhhhcccCCCCcccccccCCCCCcccccc
Q 048535 336 TIRQVLKMLEGQTEGT-------GLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINK 391 (409)
Q Consensus 336 t~~evl~~L~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~ 391 (409)
....+-.......... .+.......+++.+|+..+|..|.+..+++.||||.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~ 292 (294)
T PLN00009 230 GVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGD 292 (294)
T ss_pred ccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhc
Confidence 1111111000000000 0111222468899999999999999999999999998764
No 346
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.96 E-value=1.4e-28 Score=239.62 Aligned_cols=270 Identities=19% Similarity=0.277 Sum_probs=182.6
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC-----
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK----- 181 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----- 181 (409)
..++|+..+.||+|+||.||++... +..||||++... .......+.+|+.++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4678999999999999999999876 899999998543 2334467889999999999999999999887532
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccC
Q 048535 182 ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGL 261 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 261 (409)
...++||||+ +++|.+++.. ..+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 2468999999 6799988842 46899999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCce-eeeccc---cc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCC-
Q 048535 262 AKMHHHGQV-MSGRRP---IE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEAN- 332 (409)
Q Consensus 262 a~~~~~~~~-~~g~~p---~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~- 332 (409)
++....... ..+... .+ ....+...|+|+++ ..+++++........... ...+.++.. +....|.
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG--~ll~~l~~g~~pf~~~~~---~~~~~~~~~-~~~~~~~~ 238 (343)
T cd07880 165 ARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVG--CIMAEMLTGKPLFKGHDH---LDQLMEIMK-VTGTPSKE 238 (343)
T ss_pred ccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHH--HHHHHHHhCCCCCCCCCH---HHHHHHHHH-hcCCCCHH
Confidence 986543321 111111 11 12356778999985 334444443322111111 111222111 1111000
Q ss_pred --CC---CCHHHHHHHHhcCcCC----CCCCCCCcchhHHhhhcccCCCCcccccccCCCCCccccccccC
Q 048535 333 --SR---PTIRQVLKMLEGQTEG----TGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINKNRS 394 (409)
Q Consensus 333 --~R---Pt~~evl~~L~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~~~~ 394 (409)
++ .........+...... ....-.....+++.+|+..+|.+|++..+++.||||........
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~ 309 (343)
T cd07880 239 FVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPED 309 (343)
T ss_pred HHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCccc
Confidence 00 0011111111111000 00011122478999999999999999999999999998764433
No 347
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.96 E-value=3.7e-28 Score=233.46 Aligned_cols=220 Identities=25% Similarity=0.355 Sum_probs=165.5
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
|...+.||+|+||.||+|+.. +..||+|.+... .....+.+.+|++++++++|||++++++++.+ ....++|||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 101 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-EHTAWLVME 101 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-CCEEEEEEe
Confidence 555678999999999999985 889999998643 33445678899999999999999999999987 678999999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 269 (409)
|++ |+|.+++.. ....+++.++..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++.......
T Consensus 102 ~~~-~~l~~~l~~--~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~ 175 (313)
T cd06633 102 YCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPAN 175 (313)
T ss_pred cCC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCC
Confidence 996 588887754 2346899999999999999999999 8899999999999999999999999999987644332
Q ss_pred eeeecccc---c------cCCCcHHHHHHhhhccCcHHHHhhHHh---------------hh--cCCCCHHHHHHHHHHH
Q 048535 270 VMSGRRPI---E------EGKRNLVDRMWSLTERSELLSVLDERL---------------KA--KGGYADEVVEKVLHLG 323 (409)
Q Consensus 270 ~~~g~~p~---~------~~~~~~~~~vws~~~~~~~~~~~~~~l---------------~~--~~~~~~~~~~~l~~l~ 323 (409)
...|...+ + ...++..+|+|+++. .++++..... .. ...........+.+++
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGv--il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 253 (313)
T cd06633 176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI--TCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFV 253 (313)
T ss_pred CccccccccChhhccccCCCCCCchhhHHHHHH--HHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHH
Confidence 22222211 1 133566789998741 1222211111 00 0011122345688899
Q ss_pred HHccCcCCCCCCCHHHHHHH
Q 048535 324 LLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 324 ~~Cl~~dP~~RPt~~evl~~ 343 (409)
.+||+.+|.+||++.++++.
T Consensus 254 ~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 254 DYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHHccCChhhCcCHHHHhcC
Confidence 99999999999999988853
No 348
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=1.4e-28 Score=233.39 Aligned_cols=147 Identities=26% Similarity=0.312 Sum_probs=128.4
Q ss_pred CCCccceeecCCceEEEEEEE-----CCcEEEEEEeccCC----hHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCe
Q 048535 114 GFSEENVIGLGGNGKVYKGQL-----LGVEVALKRISLDS----EHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKES 183 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~-----~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 183 (409)
+|+..+.||+|+||.||++.. .|..||+|+++... ....+.+.+|+.++.++ +|+||+++++++.. +..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~ 79 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-DTK 79 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec-CCe
Confidence 477889999999999999986 37889999997532 22346788999999999 69999999998876 678
Q ss_pred EEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcc
Q 048535 184 LILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAK 263 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 263 (409)
.++||||+++++|.+++.. ...+++..+..++.|++.||.||| +.+++||||||+|||++.++.+||+|||+++
T Consensus 80 ~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 80 LHLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccce
Confidence 8999999999999999954 346889999999999999999999 8999999999999999999999999999998
Q ss_pred cccC
Q 048535 264 MHHH 267 (409)
Q Consensus 264 ~~~~ 267 (409)
....
T Consensus 154 ~~~~ 157 (290)
T cd05613 154 EFHE 157 (290)
T ss_pred eccc
Confidence 6543
No 349
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.96 E-value=1.6e-28 Score=235.53 Aligned_cols=223 Identities=26% Similarity=0.368 Sum_probs=169.1
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
+.|+..+.||+|+||.||+|... +..+|+|.+... .....+++.+|+++++.++|+|++++++++.. ....++|
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 93 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLV 93 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-CCeeEEE
Confidence 34666788999999999999986 788999998642 33445678899999999999999999999987 6788999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
|||+. |+|.+++... ...+++..+..++.|++.||.||| +.+++||||||+|||++.++.+||+|||++.....
T Consensus 94 ~e~~~-~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 94 MEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred EEccC-CCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 99996 5888877542 345899999999999999999999 89999999999999999999999999999987654
Q ss_pred Cceeeecccc---c------cCCCcHHHHHHhhhccCcHHHHhhHH---------------hhhc--CCCCHHHHHHHHH
Q 048535 268 GQVMSGRRPI---E------EGKRNLVDRMWSLTERSELLSVLDER---------------LKAK--GGYADEVVEKVLH 321 (409)
Q Consensus 268 ~~~~~g~~p~---~------~~~~~~~~~vws~~~~~~~~~~~~~~---------------l~~~--~~~~~~~~~~l~~ 321 (409)
.....|...+ + ....+...|+|+++. .+++++... .... ..........+.+
T Consensus 168 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~--il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (308)
T cd06634 168 ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI--TCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRN 245 (308)
T ss_pred cccccCCccccCHHHHhhcccCCCCcccchHHHHH--HHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHH
Confidence 4323222211 1 123455678888731 111111111 1000 0112245567899
Q ss_pred HHHHccCcCCCCCCCHHHHHHHH
Q 048535 322 LGLLCAHPEANSRPTIRQVLKML 344 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt~~evl~~L 344 (409)
++.+||+.+|++||++.++++..
T Consensus 246 li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 246 FVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred HHHHHhhCCcccCCCHHHHhhCc
Confidence 99999999999999999998763
No 350
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.96 E-value=2.9e-28 Score=237.13 Aligned_cols=227 Identities=21% Similarity=0.307 Sum_probs=167.0
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC-----C
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK-----E 182 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~ 182 (409)
.++|...+.||+|+||.||+|... ++.||+|++... .......+.+|+.++++++||||+++++++.... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999975 899999998643 2233456889999999999999999999886422 3
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 183 SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
..++|+||+.. +|.+++. ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 46899999975 8877651 25899999999999999999999 889999999999999999999999999999
Q ss_pred ccccCCce-eeec---cccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhc--------------------------
Q 048535 263 KMHHHGQV-MSGR---RPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAK-------------------------- 308 (409)
Q Consensus 263 ~~~~~~~~-~~g~---~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~-------------------------- 308 (409)
+....... ..+. .+.+ ...++..+|+|+++. .+++++.......
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGv--il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T cd07879 165 RHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGC--IMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKL 242 (342)
T ss_pred cCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHH--HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 86543210 1111 1112 123567789998731 1111111100000
Q ss_pred ------------CCCC--------HHHHHHHHHHHHHccCcCCCCCCCHHHHHHH--HhcCcC
Q 048535 309 ------------GGYA--------DEVVEKVLHLGLLCAHPEANSRPTIRQVLKM--LEGQTE 349 (409)
Q Consensus 309 ------------~~~~--------~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~~ 349 (409)
...+ ......+.+++.+||+.||++||++.+++.. +++...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 243 EDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred cccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 0000 0123457899999999999999999999854 655543
No 351
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.96 E-value=1.6e-28 Score=231.51 Aligned_cols=171 Identities=28% Similarity=0.386 Sum_probs=139.6
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
|+..+.||+|++|.||+|... ++.+|+|.++... ......+.+|+.++++++|+||+++++++.. +...++|+||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH-KGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc-CCCEEEEEec
Confidence 566789999999999999986 8899999987542 2345678899999999999999999999887 6789999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc-
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ- 269 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~- 269 (409)
+++ +|.+++... ...+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.+||+|||.+.......
T Consensus 80 ~~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 80 MDT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred cCC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 976 898888542 246899999999999999999999 8999999999999999999999999999997665432
Q ss_pred e---eeecc---ccc---cC-CCcHHHHHHhhh
Q 048535 270 V---MSGRR---PIE---EG-KRNLVDRMWSLT 292 (409)
Q Consensus 270 ~---~~g~~---p~~---~~-~~~~~~~vws~~ 292 (409)
. ..+.. +.+ .. ..+...|+|+++
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG 186 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVG 186 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHH
Confidence 0 01111 111 12 456778999984
No 352
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.96 E-value=3.1e-28 Score=227.92 Aligned_cols=221 Identities=25% Similarity=0.383 Sum_probs=162.6
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-----ChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-CCeE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-----SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-KESL 184 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~ 184 (409)
.+|+..+.||+|+||.||+|... ++.||+|.+... .......+.+|++++++++|+||+++++++.+. ....
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 57888999999999999999976 889999987532 234456789999999999999999999988653 3468
Q ss_pred EEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 185 ILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
++++||+++++|.+++.. ...+++.....++.|++.||.||| +.+++|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 899999999999999853 235889999999999999999999 89999999999999999999999999999976
Q ss_pred ccCCc-------eeeecc---ccc---cCCCcHHHHHHhhhccCcHHHHhhHH---------------hh--hcCCCCHH
Q 048535 265 HHHGQ-------VMSGRR---PIE---EGKRNLVDRMWSLTERSELLSVLDER---------------LK--AKGGYADE 314 (409)
Q Consensus 265 ~~~~~-------~~~g~~---p~~---~~~~~~~~~vws~~~~~~~~~~~~~~---------------l~--~~~~~~~~ 314 (409)
..... ...|.. +.+ ....+..+|+|+++ ..+++++... .. .....+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG--~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~ 233 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVA--CTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDG 233 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHH--HHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcc
Confidence 43210 111211 111 12345667888873 1122222111 10 01223444
Q ss_pred HHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 315 VVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 315 ~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
..+.+.+++.+||+ +|..|||+.+++.
T Consensus 234 ~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 234 VSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred cCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 55667777777777 4577777776654
No 353
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=1.2e-28 Score=238.97 Aligned_cols=269 Identities=20% Similarity=0.228 Sum_probs=181.6
Q ss_pred CCCC-ccceeecCCceEEEEEEEC--CcEEEEEEeccCChHH--------------HHHHHHHHHHhccCCCCceeeEee
Q 048535 113 KGFS-EENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHG--------------MREFLAEVSSLGRLKHRNLVGLRG 175 (409)
Q Consensus 113 ~~f~-~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~--------------~~~~~~E~~~l~~l~H~niv~l~g 175 (409)
++|. ..+.||+|+||.||+|... ++.||||.++...... ...+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4554 3577999999999999976 8999999986542111 124779999999999999999999
Q ss_pred EEEccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEE
Q 048535 176 WCKKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNAR 255 (409)
Q Consensus 176 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~k 255 (409)
++.. .+..++||||++ |+|.+++.. ...+++.....++.|++.||.||| +.+|+|+||||+||+++.++.+|
T Consensus 88 ~~~~-~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVE-GDFINLVMDIMA-SDLKKVVDR---KIRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEec-CCcEEEEEeccc-cCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEE
Confidence 9987 678999999997 599999843 346899999999999999999999 89999999999999999999999
Q ss_pred EecccCcccccCCc---------------eee---e---ccccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCC
Q 048535 256 LGDFGLAKMHHHGQ---------------VMS---G---RRPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGG 310 (409)
Q Consensus 256 l~DFGla~~~~~~~---------------~~~---g---~~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~ 310 (409)
|+|||+++...... ..+ + ..+.+ ...++...|+|+++ ..+++++.........
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG--~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVG--CIFAELLTGKPLFPGE 237 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHH--HHHHHHHhCCCCCCCC
Confidence 99999997654111 000 0 11111 12346789999996 4455665543332222
Q ss_pred CCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCCC------CCCCCCcchhHHhhhcccCCCCcccccccCCCC
Q 048535 311 YADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEGT------GLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHP 384 (409)
Q Consensus 311 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp 384 (409)
...+. +..+...+-.+.+..=|....+-...+.....+ .......-.+++.+|+..+|.+|+++++++.||
T Consensus 238 ~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 238 NEIDQ---LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred CHHHH---HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 22222 222222222211111111111100000000000 001112346899999999999999999999999
Q ss_pred CccccccccC
Q 048535 385 TFNEINKNRS 394 (409)
Q Consensus 385 ~~~~~~~~~~ 394 (409)
||....+.-.
T Consensus 315 ~~~~~~~~~~ 324 (335)
T PTZ00024 315 YFKSDPLPCD 324 (335)
T ss_pred ccCCCCCCCC
Confidence 9987665443
No 354
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.96 E-value=3.5e-28 Score=229.71 Aligned_cols=147 Identities=29% Similarity=0.522 Sum_probs=124.1
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccC---CCCceeeEeeEEEccCCe----
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRL---KHRNLVGLRGWCKKEKES---- 183 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~~---- 183 (409)
|++.+.||+|+||.||+|+.. ++.||+|+++.. .......+.+|+.+++++ +|||++++++++.. .+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~-~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHG-PRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEee-ccCCCCc
Confidence 567889999999999999987 799999999744 222234567788777655 69999999999986 344
Q ss_pred -EEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 184 -LILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 184 -~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
.+++|||+++ +|.+++.... ...+++..+..++.|+++||.||| +.+++|+||||+||+++.++.+||+|||++
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eeEEEehhccc-CHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcc
Confidence 8999999975 8999886532 235899999999999999999999 889999999999999999999999999999
Q ss_pred ccccC
Q 048535 263 KMHHH 267 (409)
Q Consensus 263 ~~~~~ 267 (409)
.....
T Consensus 155 ~~~~~ 159 (287)
T cd07838 155 RIYSF 159 (287)
T ss_pred eeccC
Confidence 87644
No 355
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=251.52 Aligned_cols=189 Identities=25% Similarity=0.397 Sum_probs=154.8
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC-----CeEEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK-----ESLIL 186 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~~l 186 (409)
+...+.||+|+||.||+|+.+ |+.||||.++.. .....+...+|+++|++++|+|||++++.-.+.. ....+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 344578999999999999977 999999999865 3445667889999999999999999998655422 24679
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeee--CCCCc--EEEecccCc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLL--DKKMN--ARLGDFGLA 262 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl--~~~~~--~kl~DFGla 262 (409)
|||||.+|||+..|.+-.+...|++.+.+.+..+++.||.||| +++|+||||||.||++ ..+|+ -||+|||+|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 9999999999999987767778999999999999999999999 8999999999999999 34454 699999999
Q ss_pred ccccCCceee---ecccc------c-cCCCcHHHHHHhhhccCcHHHHhhHHhhhc
Q 048535 263 KMHHHGQVMS---GRRPI------E-EGKRNLVDRMWSLTERSELLSVLDERLKAK 308 (409)
Q Consensus 263 ~~~~~~~~~~---g~~p~------~-~~~~~~~~~vws~~~~~~~~~~~~~~l~~~ 308 (409)
|..+.+..++ |..-+ + ...|+...|.|+++ ..++..+.+.+++.
T Consensus 172 rel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~G--vtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 172 RELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFG--VTLYECATGELPFI 225 (732)
T ss_pred ccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhh--hHHHHHhccCCCCC
Confidence 9998877433 33221 2 25667778999997 56777777776543
No 356
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.96 E-value=1.8e-28 Score=233.61 Aligned_cols=223 Identities=22% Similarity=0.348 Sum_probs=163.0
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
++|+..+.||+|+||.||+|.+. ++.||||.++.. ......++..|+.++.+. .||||+++++++.+ ....+++|
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~ 93 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT-DSDVFICM 93 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec-CCeEEEEe
Confidence 66788899999999999999997 899999999754 233456677888877777 59999999999987 67899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
||+++ +|.+++... ...+++..+..++.|+++||+|||+ ..+|+||||+|+||++++++.+||+|||++......
T Consensus 94 e~~~~-~l~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 94 ELMST-CLDKLLKRI--QGPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eccCc-CHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 99854 787776542 2368999999999999999999993 258999999999999999999999999999765432
Q ss_pred cee---eecc---ccc-------cCCCcHHHHHHhhhccCcHHHHhh----------------HHhhhc-C--CCCHHHH
Q 048535 269 QVM---SGRR---PIE-------EGKRNLVDRMWSLTERSELLSVLD----------------ERLKAK-G--GYADEVV 316 (409)
Q Consensus 269 ~~~---~g~~---p~~-------~~~~~~~~~vws~~~~~~~~~~~~----------------~~l~~~-~--~~~~~~~ 316 (409)
... .+.. +.+ ....+...|+|+++ ..+++++. ..+... . .......
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG--~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (296)
T cd06618 169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLG--ISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFS 246 (296)
T ss_pred CcccCCCCCccccCHhhcCCCCCccccccchhHHHHH--HHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCC
Confidence 111 1111 111 12245678999874 11222221 111100 0 0111235
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHHHH
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
.++.+++.+||+.||.+||++.++++.
T Consensus 247 ~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 247 PDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 567888889999999999998888754
No 357
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.96 E-value=3.9e-28 Score=231.26 Aligned_cols=225 Identities=16% Similarity=0.170 Sum_probs=155.9
Q ss_pred hCCCCccceeecCCceEEEEEEECC-----cEEEEEEeccCChHH-----------HHHHHHHHHHhccCCCCceeeEee
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLLG-----VEVALKRISLDSEHG-----------MREFLAEVSSLGRLKHRNLVGLRG 175 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~~-----~~vAvK~~~~~~~~~-----------~~~~~~E~~~l~~l~H~niv~l~g 175 (409)
.++|++.+.||+|+||.||+|...+ ..+|+|......... ......+...+..++|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3679999999999999999999762 356676643322111 112234455667789999999999
Q ss_pred EEEccCC---eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC
Q 048535 176 WCKKEKE---SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM 252 (409)
Q Consensus 176 ~~~~~~~---~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~ 252 (409)
++..... ..++++|++.. ++.+.+.. ....++..+..++.|++.||+||| +.+|+||||||+|||++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNN 163 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCC
Confidence 7654322 34678887754 67766632 223678889999999999999999 89999999999999999999
Q ss_pred cEEEecccCcccccCCc-----------eeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhc-------
Q 048535 253 NARLGDFGLAKMHHHGQ-----------VMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAK------- 308 (409)
Q Consensus 253 ~~kl~DFGla~~~~~~~-----------~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~------- 308 (409)
.+||+|||+|+...... ...|...+ ....++..+|+|+++ ..+++++....+..
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG--~~l~el~~g~~P~~~~~~~~~ 241 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLG--YCMLKWAGIKLPWKGFGHNGN 241 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHH--HHHHHHHhCCCCCCccccchH
Confidence 99999999998653211 11222222 124467889999983 11222221111110
Q ss_pred ----------------CCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 048535 309 ----------------GGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLE 345 (409)
Q Consensus 309 ----------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 345 (409)
..........+.+++..||+.+|++||++.++++.|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 242 LIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 0011223567889999999999999999999998763
No 358
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=1.2e-28 Score=239.98 Aligned_cols=184 Identities=22% Similarity=0.330 Sum_probs=144.0
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCC---
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE--- 182 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--- 182 (409)
...++|+..+.||+|+||.||+|... +..||+|++... .....+.+.+|+.++++++||||+++++++.....
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 34678999999999999999999986 789999998643 33345678889999999999999999987765222
Q ss_pred --eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEeccc
Q 048535 183 --SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFG 260 (409)
Q Consensus 183 --~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFG 260 (409)
..++|+||+ +++|.+++.. ..+++..+..++.|+++||.||| +.+|+||||||+||++++++.+||+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEcccc
Confidence 389999999 5699999843 46999999999999999999999 8999999999999999999999999999
Q ss_pred CcccccCCc-eeeecc---ccc----cCCCcHHHHHHhhhccCcHHHHhhH
Q 048535 261 LAKMHHHGQ-VMSGRR---PIE----EGKRNLVDRMWSLTERSELLSVLDE 303 (409)
Q Consensus 261 la~~~~~~~-~~~g~~---p~~----~~~~~~~~~vws~~~~~~~~~~~~~ 303 (409)
++....... ...+.. +.+ ....+...|+|+++ ..+++++..
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG--v~l~elltg 212 (343)
T cd07851 164 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG--CIMAELLTG 212 (343)
T ss_pred ccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHH--HHHHHHHhC
Confidence 998654321 011111 111 12456778999985 334444443
No 359
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=2.9e-28 Score=237.20 Aligned_cols=264 Identities=20% Similarity=0.266 Sum_probs=174.2
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC---------
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK--------- 181 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--------- 181 (409)
.+|...+.||.|+||.||+|... ++.||+|.+........+.+.+|++++++++||||+++++++....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 67889999999999999999986 8899999997765566678899999999999999999998765422
Q ss_pred ----CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC-CCcEEE
Q 048535 182 ----ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK-KMNARL 256 (409)
Q Consensus 182 ----~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~-~~~~kl 256 (409)
...++||||++ ++|.+++.. ..+++..+..++.|++.||.||| +.+|+||||||+||+++. ++.+||
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEE
Confidence 35789999997 599988842 35899999999999999999999 899999999999999974 567899
Q ss_pred ecccCcccccCCce-------eeeccc---cc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHH
Q 048535 257 GDFGLAKMHHHGQV-------MSGRRP---IE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHL 322 (409)
Q Consensus 257 ~DFGla~~~~~~~~-------~~g~~p---~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l 322 (409)
+|||+++....... ..+... .+ ...++..+|+|+++ ..+++++..........+ ...+..+
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlG--vil~el~~g~~pf~~~~~---~~~~~~~ 231 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAG--CIFAEMLTGKPLFAGAHE---LEQMQLI 231 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHH--HHHHHHHhCCCCCCCCCH---HHHHHHH
Confidence 99999976532110 011111 11 12345678999986 344555444433211111 1112222
Q ss_pred HHHccCcCCCCCCCHHHHH-HHHh-cCcCCC------CCCCCCcchhHHhhhcccCCCCcccccccCCCCCcccc
Q 048535 323 GLLCAHPEANSRPTIRQVL-KMLE-GQTEGT------GLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEI 389 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl-~~L~-~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~ 389 (409)
....--.++.+++...... ..+. ...... .+.......+++.+|+..+|.+|++..+++.||||+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 232 LESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred HHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence 1111111111111110000 0000 000000 00011223578888888888888888888888888754
No 360
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.96 E-value=2.6e-28 Score=233.37 Aligned_cols=264 Identities=25% Similarity=0.336 Sum_probs=183.6
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccC------
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK------ 181 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 181 (409)
.++|+..+.||+|+||.||+|... ++.||+|++.... ......+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478999999999999999999986 8899999986542 222345778999999999999999999876432
Q ss_pred -CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEeccc
Q 048535 182 -ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFG 260 (409)
Q Consensus 182 -~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFG 260 (409)
..+++|+||+.+ +|.+.+.. ....+++..+..++.|+++||+||| +.+|+|+||||+|||+++++.+||+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCc
Confidence 247999999975 78777753 2346999999999999999999999 8999999999999999999999999999
Q ss_pred CcccccCCcee---------------eec---cccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHH
Q 048535 261 LAKMHHHGQVM---------------SGR---RPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEK 318 (409)
Q Consensus 261 la~~~~~~~~~---------------~g~---~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 318 (409)
+++........ .+. .+.+ ...++...|+|+++ ..+++++.......+.. ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG--~il~el~~g~~~~~~~~---~~~~ 235 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIG--CVFAEMFTRRPILQGKS---DIDQ 235 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHH--HHHHHHHhCCCCCCCCC---HHHH
Confidence 99865432210 011 1111 12346678999996 44555555433221111 1223
Q ss_pred HHHHHHHccCcCCCCCCCHHHHHHHHhcCc--CCCC------CCCCCcchhHHhhhcccCCCCcccccccCCCCCc
Q 048535 319 VLHLGLLCAHPEANSRPTIRQVLKMLEGQT--EGTG------LEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTF 386 (409)
Q Consensus 319 l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~--~~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~ 386 (409)
...+...|-...|...|....+-....... ..+. ......-.+++.+|+..+|.+|++..+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 236 LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 334444455544444443322221110000 0000 0001123689999999999999999999999997
No 361
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.96 E-value=4.3e-28 Score=226.17 Aligned_cols=224 Identities=21% Similarity=0.310 Sum_probs=161.8
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-----ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-----SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
+|.+.+.||+|+||.||++... +..+++|.++.. ......++..|+.++++++||||+++++++.+ ....++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE-RDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-CCceEE
Confidence 4778899999999999999886 445556655421 22334467789999999999999999999876 667899
Q ss_pred EEEeCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 187 IYDYMENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
||||+++++|.+++... .....+++..+..++.|++.||.||| +.+++|+||||+||++++ +.+||+|||+++..
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~ 155 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLL 155 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeec
Confidence 99999999999988642 23356999999999999999999999 899999999999999975 56999999998765
Q ss_pred cCCce----eeecc---c---cccCCCcHHHHHHhhhcc-------------CcHHHHhhHHhhh-cCCCCHHHHHHHHH
Q 048535 266 HHGQV----MSGRR---P---IEEGKRNLVDRMWSLTER-------------SELLSVLDERLKA-KGGYADEVVEKVLH 321 (409)
Q Consensus 266 ~~~~~----~~g~~---p---~~~~~~~~~~~vws~~~~-------------~~~~~~~~~~l~~-~~~~~~~~~~~l~~ 321 (409)
..... ..|.. + .....++...|+|+++.- ............. ....+......+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (260)
T cd08222 156 MGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNS 235 (260)
T ss_pred CCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHH
Confidence 43221 11111 1 111334556888887311 1111111111110 12233455667888
Q ss_pred HHHHccCcCCCCCCCHHHHHH
Q 048535 322 LGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 322 l~~~Cl~~dP~~RPt~~evl~ 342 (409)
++.+||+.+|++||++.|+++
T Consensus 236 li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 236 IMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHHHHhcCChhhCcCHHHHhh
Confidence 888999999999999888875
No 362
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=6.3e-29 Score=225.88 Aligned_cols=263 Identities=19% Similarity=0.274 Sum_probs=188.7
Q ss_pred ccHHHHHHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEEc
Q 048535 103 VSYQEIHAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKK 179 (409)
Q Consensus 103 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 179 (409)
-+|+++...| .+.||+|+|+.|-.+... |.++|||++.+.....+.+..+|++++.+. .|+||++++.||.+
T Consensus 73 g~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 73 GKFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred chHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 3577887777 578999999999988765 999999999887777788999999999999 69999999999988
Q ss_pred cCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC---cEEE
Q 048535 180 EKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM---NARL 256 (409)
Q Consensus 180 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~---~~kl 256 (409)
+.+.|||||-|.||+|...|.+ ...+++.++.++..+|+.||.||| .++|.||||||+|||-.+.. -+||
T Consensus 148 -d~~FYLVfEKm~GGplLshI~~---~~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKi 220 (463)
T KOG0607|consen 148 -DTRFYLVFEKMRGGPLLSHIQK---RKHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKI 220 (463)
T ss_pred -cceEEEEEecccCchHHHHHHH---hhhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceee
Confidence 7889999999999999999964 356999999999999999999999 89999999999999996544 3899
Q ss_pred ecccCcccccCCc---------eee--ecccc-----------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHH
Q 048535 257 GDFGLAKMHHHGQ---------VMS--GRRPI-----------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADE 314 (409)
Q Consensus 257 ~DFGla~~~~~~~---------~~~--g~~p~-----------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~ 314 (409)
|||.|..-..... ++| |...+ +...|+...|.|+++. .++-++....++.+
T Consensus 221 CDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGv--IlYImLsGYpPFvG----- 293 (463)
T KOG0607|consen 221 CDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGV--ILYIMLSGYPPFVG----- 293 (463)
T ss_pred eccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHH--HHHHHHhCCCCccC-----
Confidence 9999876433221 221 11111 0133455567788752 22222222222111
Q ss_pred HHHHHHHHHHHccCcCCCCC-----CCHHHHHHHHhc-CcCCCCCCCCC---cchhHHhhhcccCCCCcccccccCCCCC
Q 048535 315 VVEKVLHLGLLCAHPEANSR-----PTIRQVLKMLEG-QTEGTGLEDEG---MNVHLLKRIGTRAMTSSWKFAGSRGHPT 385 (409)
Q Consensus 315 ~~~~l~~l~~~Cl~~dP~~R-----Pt~~evl~~L~~-~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~hp~ 385 (409)
.|-+..--+| -.-..+.+.+++ --+.|+..=.. ...|+...++..++..|.+..+.++|||
T Consensus 294 ----------~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw 363 (463)
T KOG0607|consen 294 ----------HCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPW 363 (463)
T ss_pred ----------ccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcc
Confidence 1222122222 222333344432 33443322111 2378899999999999999999999999
Q ss_pred ccccccccC
Q 048535 386 FNEINKNRS 394 (409)
Q Consensus 386 ~~~~~~~~~ 394 (409)
+..+...-.
T Consensus 364 ~~~~~~eka 372 (463)
T KOG0607|consen 364 VQRCAPEKA 372 (463)
T ss_pred ccccchhcc
Confidence 998775543
No 363
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.96 E-value=7.5e-28 Score=222.80 Aligned_cols=210 Identities=23% Similarity=0.258 Sum_probs=158.4
Q ss_pred eecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCC
Q 048535 121 IGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGS 195 (409)
Q Consensus 121 lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gs 195 (409)
||+|+||.||++... ++.+|+|.+.... ......+..|+.++++++||||+++++.+.. +...+++|||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT-EEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec-CCeeEEEEecCCCCc
Confidence 699999999999986 8899999987542 2345688999999999999999999998876 778999999999999
Q ss_pred HHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc----ee
Q 048535 196 LDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ----VM 271 (409)
Q Consensus 196 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~----~~ 271 (409)
|.+++.. ...+++..+..++.|+++||.||| +.+++|+||||+||+++.++.++|+|||++....... ..
T Consensus 80 L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (250)
T cd05123 80 LFSHLSK---EGRFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTF 153 (250)
T ss_pred HHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCC
Confidence 9999953 336899999999999999999999 8999999999999999999999999999997654421 11
Q ss_pred eecc---cc---ccCCCcHHHHHHhhhccCcHHHHhhHH---------------hhhcCCCCHHHHHHHHHHHHHccCcC
Q 048535 272 SGRR---PI---EEGKRNLVDRMWSLTERSELLSVLDER---------------LKAKGGYADEVVEKVLHLGLLCAHPE 330 (409)
Q Consensus 272 ~g~~---p~---~~~~~~~~~~vws~~~~~~~~~~~~~~---------------l~~~~~~~~~~~~~l~~l~~~Cl~~d 330 (409)
.+.. +. .....+...|+|+++ ..+++++... .......+......+.+++.+||..|
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG--~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 231 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLG--VLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKD 231 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHH--HHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCC
Confidence 1111 11 112345668888874 1122222211 11112233333556777888888888
Q ss_pred CCCCCCHHH
Q 048535 331 ANSRPTIRQ 339 (409)
Q Consensus 331 P~~RPt~~e 339 (409)
|++|||+.+
T Consensus 232 p~~R~~~~~ 240 (250)
T cd05123 232 PTKRLGSGG 240 (250)
T ss_pred HhhCCCccc
Confidence 888888743
No 364
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=8.5e-28 Score=226.99 Aligned_cols=166 Identities=23% Similarity=0.253 Sum_probs=128.7
Q ss_pred eeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHH---HhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 120 VIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVS---SLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 120 ~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~---~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
.||+|+||.||++... ++.||+|.+.... ......+..|.. .++..+||||+++++++.+ .+..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec-CCEEEEEEecC
Confidence 4899999999999875 7899999986542 122223444443 4445689999999998887 67899999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc--
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ-- 269 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-- 269 (409)
++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 80 ~g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 153 (278)
T cd05606 80 NGGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 153 (278)
T ss_pred CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCc
Confidence 99999998843 346999999999999999999999 8999999999999999999999999999987543211
Q ss_pred eeeeccccc-------cCCCcHHHHHHhhh
Q 048535 270 VMSGRRPIE-------EGKRNLVDRMWSLT 292 (409)
Q Consensus 270 ~~~g~~p~~-------~~~~~~~~~vws~~ 292 (409)
...|...+. ...++...|+|+++
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G 183 (278)
T cd05606 154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLG 183 (278)
T ss_pred CcCCCcCCcCcHHhcCCCCCCcccchHhHH
Confidence 122322221 11345668999874
No 365
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.96 E-value=4e-28 Score=228.71 Aligned_cols=146 Identities=32% Similarity=0.468 Sum_probs=128.6
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
|+..+.||+|+||.||+|+.. ++.||+|.+.... ....+.+..|+.++++++|+|++++++++.+ ....++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT-ERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc-CCceEEEecC
Confidence 556788999999999999987 8999999997652 3344678899999999999999999999887 6789999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
++ ++|.+++.... ..+++..+..++.|++.||.||| +.+|+||||+|+||++++++.+||+|||+++....
T Consensus 80 ~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~ 150 (282)
T cd07829 80 CD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGI 150 (282)
T ss_pred cC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCC
Confidence 98 59999996532 46999999999999999999999 88999999999999999999999999999976543
No 366
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.95 E-value=1.9e-28 Score=228.11 Aligned_cols=238 Identities=18% Similarity=0.274 Sum_probs=188.3
Q ss_pred HHHHHHHhCCCCccceeecCCceEEEEEEEC-------CcEEEEEEeccC-ChHHHHHHHHHHHHhccCCCCceeeEeeE
Q 048535 105 YQEIHAATKGFSEENVIGLGGNGKVYKGQLL-------GVEVALKRISLD-SEHGMREFLAEVSSLGRLKHRNLVGLRGW 176 (409)
Q Consensus 105 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~ 176 (409)
.+++.....+++....+-+|.||.||+|.|. .+.|-+|.++.. ++-+...|+.|...+..+.|||+..+.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 3456666677888889999999999999775 345788888655 56677889999999999999999999999
Q ss_pred EEccCCeEEEEEEeCCCCCHHHHHh-----cCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC
Q 048535 177 CKKEKESLILIYDYMENGSLDKWIF-----ECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK 251 (409)
Q Consensus 177 ~~~~~~~~~lv~E~~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~ 251 (409)
+.++....+++|.++.-|+|..||. +....+.++..+.+.++.|++.||+||| ..+|||.||.++|++||+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhh
Confidence 9987888999999999999999998 3344566888899999999999999999 8999999999999999999
Q ss_pred CcEEEecccCcccccCCceee----eccccc--------cCCCcHHHHHHhhhcc--------------CcHHHH---hh
Q 048535 252 MNARLGDFGLAKMHHHGQVMS----GRRPIE--------EGKRNLVDRMWSLTER--------------SELLSV---LD 302 (409)
Q Consensus 252 ~~~kl~DFGla~~~~~~~~~~----g~~p~~--------~~~~~~~~~vws~~~~--------------~~~~~~---~~ 302 (409)
.++||+|=.++|.+-..++-+ ..+|.. ...++..+|+|+++.. -+..++ +.
T Consensus 433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylk 512 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLK 512 (563)
T ss_pred eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHh
Confidence 999999999999765444221 123332 3567778888887311 111111 11
Q ss_pred HHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcC
Q 048535 303 ERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 303 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 347 (409)
...+ -..|.++++++..++.-||...|++||+++|++.-|.+.
T Consensus 513 dGyR--laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 513 DGYR--LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred ccce--ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 1111 234567788999999999999999999999999988653
No 367
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=4.2e-30 Score=226.74 Aligned_cols=265 Identities=24% Similarity=0.375 Sum_probs=193.0
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC--hHHHHHHHHHHHHhccCCCCceeeEeeEEEcc-------C
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS--EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE-------K 181 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-------~ 181 (409)
..|....+||+|.||.||+++.. |+.||+|++-.+. ...-..-++|+.+|..|+|+|++.++..|... .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 34555678999999999999887 7889998874432 22234567899999999999999999888631 2
Q ss_pred CeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccC
Q 048535 182 ESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGL 261 (409)
Q Consensus 182 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 261 (409)
..+|+||.+|+. +|.-.|.. ....++..++.+++.++..||.|+| ...|+|||+||.|+||+.++.+||+|||+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn--~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSN--RKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcC--ccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeecccc
Confidence 358999999988 99988843 4467999999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCcee-----------eeccccc----cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHc
Q 048535 262 AKMHHHGQVM-----------SGRRPIE----EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLC 326 (409)
Q Consensus 262 a~~~~~~~~~-----------~g~~p~~----~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~C 326 (409)
|+.+...+-. --.+|.+ ...|....|+|... +.+.++.....-..++ .....+.-+-..|
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAg--CimaeMwtrspimqgn---teqqql~~Is~Lc 245 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAG--CIMAEMWTRSPIMQGN---TEQQQLHLISQLC 245 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHH--HHHHHHHccCccccCC---hHHHHHHHHHHHh
Confidence 9876544311 1122222 24566778899775 3333433322211121 2233455566678
Q ss_pred cCcCCCCCCCHHHH--HHHHhcC-------------cCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCccccc
Q 048535 327 AHPEANSRPTIRQV--LKMLEGQ-------------TEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEIN 390 (409)
Q Consensus 327 l~~dP~~RPt~~ev--l~~L~~~-------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~ 390 (409)
-+..|+-=|.+..+ .+.++-. .. +...+....|++++++..||.+|+.++++++|-||-...
T Consensus 246 Gs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~k--p~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp 322 (376)
T KOG0669|consen 246 GSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLK--PYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP 322 (376)
T ss_pred ccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcc--cccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence 88888888887754 2333111 11 111123458999999999999999999999999987643
No 368
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.95 E-value=2.3e-27 Score=229.87 Aligned_cols=146 Identities=25% Similarity=0.336 Sum_probs=123.7
Q ss_pred CCCccceeecCCceEEEEEEEC----CcEEEEEEeccC--ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEc---cCCe
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL----GVEVALKRISLD--SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKK---EKES 183 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~----~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~---~~~~ 183 (409)
+|+..+.||+|+||.||++... +..||+|.+... .....+.+.+|+++++++ +||||+++++.+.. ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778899999999999999986 568999998643 223356788999999999 59999999987542 1245
Q ss_pred EEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcc
Q 048535 184 LILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAK 263 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 263 (409)
.++++||+. ++|.+++. ....+++..+..++.||+.||.||| +.+|+||||||+|||+++++.+||+|||+++
T Consensus 81 ~~~~~e~~~-~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIR---SGQPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 788999986 59999884 3456899999999999999999999 8999999999999999999999999999998
Q ss_pred ccc
Q 048535 264 MHH 266 (409)
Q Consensus 264 ~~~ 266 (409)
...
T Consensus 154 ~~~ 156 (332)
T cd07857 154 GFS 156 (332)
T ss_pred ecc
Confidence 654
No 369
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.95 E-value=1e-27 Score=241.31 Aligned_cols=153 Identities=22% Similarity=0.321 Sum_probs=121.8
Q ss_pred HhCCCCccceeecCCceEEEEEEE------------------CCcEEEEEEeccCChHHHHHHH--------------HH
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQL------------------LGVEVALKRISLDSEHGMREFL--------------AE 158 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~------------------~~~~vAvK~~~~~~~~~~~~~~--------------~E 158 (409)
..++|++.++||+|+||.||+|.. .++.||||++........++|. .|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 1467999999765433333343 46
Q ss_pred HHHhccCCCCce-----eeEeeEEEcc-------CCeEEEEEEeCCCCCHHHHHhcCCC---------------------
Q 048535 159 VSSLGRLKHRNL-----VGLRGWCKKE-------KESLILIYDYMENGSLDKWIFECDE--------------------- 205 (409)
Q Consensus 159 ~~~l~~l~H~ni-----v~l~g~~~~~-------~~~~~lv~E~~~~gsL~~~l~~~~~--------------------- 205 (409)
+.++.+++|.|+ ++++++|... .+..+|||||+++|+|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766654 6778877531 3468999999999999999864211
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 206 SIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 206 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
...++|..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~ 360 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMC 360 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccc
Confidence 123567889999999999999999 8899999999999999999999999999997653
No 370
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.3e-28 Score=231.30 Aligned_cols=251 Identities=22% Similarity=0.274 Sum_probs=185.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
.+.|..-++||+||||.||-++.. |+.+|.|.+... ..+.....++|-.+|.+++.+.||.+--.|.. .+.+|+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeT-kd~LCl 262 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFET-KDALCL 262 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecC-CCceEE
Confidence 356888899999999999988876 999999998654 23344567899999999999999998766665 889999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
|+..|.||+|.-+|.... ...+++..++.++.+|+.||++|| ..+||.|||||+|||||+.|+++|+|+|||..+.
T Consensus 263 VLtlMNGGDLkfHiyn~g-~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHG-NPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEEeecCCceeEEeeccC-CCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 999999999998887643 357999999999999999999999 8999999999999999999999999999999998
Q ss_pred CCceeeecccc---------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCH
Q 048535 267 HGQVMSGRRPI---------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTI 337 (409)
Q Consensus 267 ~~~~~~g~~p~---------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 337 (409)
.++...|+... ..+.|++..|.|+++ ..+++++...-++.. . -+++ .-
T Consensus 339 ~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lG--CllYemi~G~sPFr~----~-KeKv----------------k~ 395 (591)
T KOG0986|consen 339 EGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLG--CLLYEMIAGHSPFRQ----R-KEKV----------------KR 395 (591)
T ss_pred CCCccccccCcccccCHHHHcCCcccCCccHHHHH--hHHHHHHcccCchhh----h-hhhh----------------hH
Confidence 88866664322 236688899999997 566666654432110 0 0000 01
Q ss_pred HHHHHHHhc-CcCCCCCCCCCcchhHHhhhcccCCCCccc-----ccccCCCCCcccccc
Q 048535 338 RQVLKMLEG-QTEGTGLEDEGMNVHLLKRIGTRAMTSSWK-----FAGSRGHPTFNEINK 391 (409)
Q Consensus 338 ~evl~~L~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~hp~~~~~~~ 391 (409)
+||-++..+ ..+.++ .-.....++...++..+|.+|.. ++++..||+|+.++-
T Consensus 396 eEvdrr~~~~~~ey~~-kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw 454 (591)
T KOG0986|consen 396 EEVDRRTLEDPEEYSD-KFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNW 454 (591)
T ss_pred HHHHHHHhcchhhccc-ccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCH
Confidence 122222111 111111 11112356666666666666665 458889999999884
No 371
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.95 E-value=2.8e-27 Score=243.36 Aligned_cols=260 Identities=17% Similarity=0.170 Sum_probs=158.4
Q ss_pred HhCCCCccceeecCCceEEEEEEEC------CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEE-----Ec
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL------GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWC-----KK 179 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~-----~~ 179 (409)
..++|+..+.||+|+||.||+|++. +..||+|++...... +.+..| .+....+.+++.++..+ ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4678999999999999999999985 478999998643221 111111 11222222222222111 12
Q ss_pred cCCeEEEEEEeCCCCCHHHHHhcCCCC-----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCC
Q 048535 180 EKESLILIYDYMENGSLDKWIFECDES-----------------IALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIK 242 (409)
Q Consensus 180 ~~~~~~lv~E~~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 242 (409)
.....++||||+++++|.+++...... .......+..++.|++.||.||| +.+|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence 356789999999999999998643210 01123345679999999999999 8999999999
Q ss_pred CCCeeeCC-CCcEEEecccCcccccCCc-----eeeecccc---c-------------------------cCCCcHHHHH
Q 048535 243 ASNVLLDK-KMNARLGDFGLAKMHHHGQ-----VMSGRRPI---E-------------------------EGKRNLVDRM 288 (409)
Q Consensus 243 p~NILl~~-~~~~kl~DFGla~~~~~~~-----~~~g~~p~---~-------------------------~~~~~~~~~v 288 (409)
|+|||++. ++.+||+|||+|+....+. ...+...+ + ...+....|+
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999986 5789999999998643221 01111100 0 0012223499
Q ss_pred HhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccC--------cCCCCCCCHHHHHHHHhcCcCCCCCCCCCcch
Q 048535 289 WSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAH--------PEANSRPTIRQVLKMLEGQTEGTGLEDEGMNV 360 (409)
Q Consensus 289 ws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~--------~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~~ 360 (409)
|+++ ..+++++-+.+. .......+...+..|-. ..+..+|...+..+.+. .+.....
T Consensus 363 wSlG--viL~el~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--------~~~~~~~ 427 (566)
T PLN03225 363 YSAG--LIFLQMAFPNLR-----SDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLD--------LDGGAGW 427 (566)
T ss_pred HHHH--HHHHHHHhCcCC-----CchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhcc--------ccchHHH
Confidence 9986 345665543322 11222223333222211 11112222222211110 0112235
Q ss_pred hHHhhhcccCCCCcccccccCCCCCccccccc
Q 048535 361 HLLKRIGTRAMTSSWKFAGSRGHPTFNEINKN 392 (409)
Q Consensus 361 ~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~~ 392 (409)
+++.+|+..+|.+|+++.+++.||||...+..
T Consensus 428 dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 428 ELLKSMMRFKGRQRISAKAALAHPYFDREGLL 459 (566)
T ss_pred HHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence 89999999999999999999999999876643
No 372
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.9e-28 Score=253.10 Aligned_cols=252 Identities=23% Similarity=0.218 Sum_probs=189.8
Q ss_pred cHHHHHHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEE
Q 048535 104 SYQEIHAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCK 178 (409)
Q Consensus 104 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 178 (409)
...++....++|.+.+.||+|+||.|..++.+ ++.+|.|+++.. ......-|..|-.+|..-+.+.|++++-.|.
T Consensus 66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ 145 (1317)
T KOG0612|consen 66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ 145 (1317)
T ss_pred HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence 34567777899999999999999999999997 788999999763 2334567899999999999999999998888
Q ss_pred ccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEec
Q 048535 179 KEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGD 258 (409)
Q Consensus 179 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~D 258 (409)
+ ..++|+|||||+||+|-.++.+.. .+++..+..++..|+-||.-|| +.|+|||||||+|||||.+|.+||+|
T Consensus 146 D-~~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLAD 218 (1317)
T KOG0612|consen 146 D-ERYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLAD 218 (1317)
T ss_pred C-ccceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeecc
Confidence 7 789999999999999999995432 6999999999999999999999 89999999999999999999999999
Q ss_pred ccCccccc-CCcee----eeccccc-----------cCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHH
Q 048535 259 FGLAKMHH-HGQVM----SGRRPIE-----------EGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHL 322 (409)
Q Consensus 259 FGla~~~~-~~~~~----~g~~p~~-----------~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l 322 (409)
||.+-.+. .+.+. .|++-+- .+.|+.-.|.|+++ --+++++-+.- +-|.+..+...-+|
T Consensus 219 FGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlG--V~~YEMlyG~T---PFYadslveTY~KI 293 (1317)
T KOG0612|consen 219 FGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLG--VFMYEMLYGET---PFYADSLVETYGKI 293 (1317)
T ss_pred chhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhH--HHHHHHHcCCC---cchHHHHHHHHHHH
Confidence 99876655 44322 2333221 14567778899987 34566665543 23455555656666
Q ss_pred HHH--ccCcC--CCCCCCHHHHHHHHhcCcCCCCCCCCCcchhHHhhhcccCCCCccc---ccccCCCCCccccc
Q 048535 323 GLL--CAHPE--ANSRPTIRQVLKMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWK---FAGSRGHPTFNEIN 390 (409)
Q Consensus 323 ~~~--Cl~~d--P~~RPt~~evl~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~hp~~~~~~ 390 (409)
+.. |++.- +.-=+.+ .+++.+++. ++..|.+ ..++.+||||.+++
T Consensus 294 m~hk~~l~FP~~~~VSeea----------------------kdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~ 345 (1317)
T KOG0612|consen 294 MNHKESLSFPDETDVSEEA----------------------KDLIEALLC-DREVRLGRNGIEDIKNHPFFEGID 345 (1317)
T ss_pred hchhhhcCCCcccccCHHH----------------------HHHHHHHhc-ChhhhcccccHHHHHhCccccCCC
Confidence 544 44332 1111222 344444432 2333444 88999999999987
No 373
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.95 E-value=4.2e-28 Score=216.38 Aligned_cols=222 Identities=20% Similarity=0.306 Sum_probs=171.2
Q ss_pred CccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 116 SEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 116 ~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
+....||.|..|.|++++.. |...|||.+... +....++++..+.++.+- +.|.||+.+|||.. +...++.||.|
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~-n~dV~IcMelM 173 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT-NTDVFICMELM 173 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee-CchHHHHHHHH
Confidence 44577999999999999998 799999999765 556678889999887766 59999999999998 66788999998
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCce-
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQV- 270 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~- 270 (409)
.. .+..++.. -.+++++..+-++...+.+||.||-+ .++|+|||+||+|||+|+.|++|+||||++..+..+..
T Consensus 174 s~-C~ekLlkr--ik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh 248 (391)
T KOG0983|consen 174 ST-CAEKLLKR--IKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH 248 (391)
T ss_pred HH-HHHHHHHH--hcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeeccccc
Confidence 55 66676654 34579999999999999999999997 78999999999999999999999999999976654431
Q ss_pred --eeecc---------ccccCCCcHHHHHHhhhcc--------------CcHHHHhhHHhhhcC---CCCHHHHHHHHHH
Q 048535 271 --MSGRR---------PIEEGKRNLVDRMWSLTER--------------SELLSVLDERLKAKG---GYADEVVEKVLHL 322 (409)
Q Consensus 271 --~~g~~---------p~~~~~~~~~~~vws~~~~--------------~~~~~~~~~~l~~~~---~~~~~~~~~l~~l 322 (409)
-.|-. |.....|+..+|||+++-. ..-.+++...+...+ +.....+..+.++
T Consensus 249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~f 328 (391)
T KOG0983|consen 249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSF 328 (391)
T ss_pred ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHH
Confidence 11211 1223678999999998321 112233333333211 1122356788999
Q ss_pred HHHccCcCCCCCCCHHHHHHH
Q 048535 323 GLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~~ 343 (409)
+..||..|+.+||...++++.
T Consensus 329 v~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 329 VKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred HHHHhhcCcccCcchHHHhcC
Confidence 999999999999999998763
No 374
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=9e-28 Score=232.13 Aligned_cols=221 Identities=21% Similarity=0.289 Sum_probs=166.3
Q ss_pred CCCCccceeecCCceEEEEEEEC-CcEEEEEEeccC--ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLD--SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
..|++.+.||+||.+.||++... .+.+|+|++... +.+....|.+|+..|.+| .|.+||++++|-.. ++.+|+||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-d~~lYmvm 439 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-DGYLYMVM 439 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-CceEEEEe
Confidence 45888899999999999999987 677888887644 667788999999999999 69999999999887 78999999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
||=+. +|.++|.... .....| .+..+..|++.++.++| ..+|||.||||.|.|+- .|.+||+|||.|..+..+
T Consensus 440 E~Gd~-DL~kiL~k~~-~~~~~~-~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 440 ECGDI-DLNKILKKKK-SIDPDW-FLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPD 512 (677)
T ss_pred ecccc-cHHHHHHhcc-CCCchH-HHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEeeeechhcccCcc
Confidence 98755 9999996532 222334 78889999999999999 89999999999999994 578999999999987665
Q ss_pred c------eeeeccccc------------c-----CCCcHHHHHHhhhccCcHHHHhhHHhhhc--------------C--
Q 048535 269 Q------VMSGRRPIE------------E-----GKRNLVDRMWSLTERSELLSVLDERLKAK--------------G-- 309 (409)
Q Consensus 269 ~------~~~g~~p~~------------~-----~~~~~~~~vws~~~~~~~~~~~~~~l~~~--------------~-- 309 (409)
+ .-.|...+. . -..+-.+|||+++ +.+++++..+.++. +
T Consensus 513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLG--CILYqMvYgktPf~~~~n~~aKl~aI~~P~~ 590 (677)
T KOG0596|consen 513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLG--CILYQMVYGKTPFGQIINQIAKLHAITDPNH 590 (677)
T ss_pred ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhh--hHHHHHHhcCCchHHHHHHHHHHHhhcCCCc
Confidence 4 111222111 0 1245678999996 44454443321110 0
Q ss_pred --CCCHH-HHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 048535 310 --GYADE-VVEKVLHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 310 --~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
+|+.- ...++.+++..||+.||.+|||+.++++.
T Consensus 591 ~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 591 EIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred cccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 11111 11238889999999999999999998863
No 375
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-27 Score=229.46 Aligned_cols=218 Identities=22% Similarity=0.301 Sum_probs=166.9
Q ss_pred cceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCC
Q 048535 118 ENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMEN 193 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~ 193 (409)
.+.||+|.||+||-|+.+ |+.||||++.+. ..++..++.+|+.+|.+++||.||.+.-.|.. .++.++|||-+ +
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET-~ervFVVMEKl-~ 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET-PERVFVVMEKL-H 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC-CceEEEEehhh-c
Confidence 478999999999999987 999999999654 34455788999999999999999999988887 78999999999 5
Q ss_pred CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC---CcEEEecccCcccccCCc-
Q 048535 194 GSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK---MNARLGDFGLAKMHHHGQ- 269 (409)
Q Consensus 194 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~---~~~kl~DFGla~~~~~~~- 269 (409)
|+..+.|... ..+.|++.....++.||+.||.||| -++|+|+||||+||||.+. -.+||||||+||++....
T Consensus 647 GDMLEMILSs-EkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF 722 (888)
T KOG4236|consen 647 GDMLEMILSS-EKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF 722 (888)
T ss_pred chHHHHHHHh-hcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhhh
Confidence 5888877653 4567999999999999999999999 8999999999999999654 359999999999987654
Q ss_pred --eeeeccccc------cCCCcHHHHHHhhh--------------ccCcHHHH-hhHHhhhcCCCCHHHHHHHHHHHHHc
Q 048535 270 --VMSGRRPIE------EGKRNLVDRMWSLT--------------ERSELLSV-LDERLKAKGGYADEVVEKVLHLGLLC 326 (409)
Q Consensus 270 --~~~g~~p~~------~~~~~~~~~vws~~--------------~~~~~~~~-~~~~l~~~~~~~~~~~~~l~~l~~~C 326 (409)
.+.|.+.+- ...|+-.-|+|+.+ ..+++.+- -+.....++....+.....++++...
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~L 802 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNL 802 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHH
Confidence 344555443 24566667899872 11222222 12222222344456666777777777
Q ss_pred cCcCCCCCCCHHHHH
Q 048535 327 AHPEANSRPTIRQVL 341 (409)
Q Consensus 327 l~~dP~~RPt~~evl 341 (409)
++..-.+|-|..+.+
T Consensus 803 LqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 803 LQVKMRKRYSVDKSL 817 (888)
T ss_pred HHHHHHHhcchHhhc
Confidence 777777777776654
No 376
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-28 Score=219.34 Aligned_cols=223 Identities=24% Similarity=0.339 Sum_probs=168.4
Q ss_pred CccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 116 SEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 116 ~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
+....||.|+||+|+|-.++ |+..|||+++.. .....++++.|.+...+- +.||||+++|.+.. .+..|+.||.|
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~-EGdcWiCMELM 145 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS-EGDCWICMELM 145 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc-CCceeeeHHHH
Confidence 34578999999999999887 999999999866 446678899999876555 89999999999987 67789999999
Q ss_pred CCCCHHHH---HhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 192 ENGSLDKW---IFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 192 ~~gsL~~~---l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
+- ||+.+ ++. ..+..+++..+-+|....++||.||-+ ...|||||+||+|||||..|.+||||||.+..+..+
T Consensus 146 d~-SlDklYk~vy~-vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 146 DI-SLDKLYKRVYS-VQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS 221 (361)
T ss_pred hh-hHHHHHHHHHH-HHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHH
Confidence 66 76654 333 234468999999999999999999997 688999999999999999999999999998765433
Q ss_pred c---eeeeccccc--------cCCCcHHHHHHhhhcc-----------CcHHHHhhHHhhh-cCC-----CCH---HHHH
Q 048535 269 Q---VMSGRRPIE--------EGKRNLVDRMWSLTER-----------SELLSVLDERLKA-KGG-----YAD---EVVE 317 (409)
Q Consensus 269 ~---~~~g~~p~~--------~~~~~~~~~vws~~~~-----------~~~~~~~~~~l~~-~~~-----~~~---~~~~ 317 (409)
- .-.|-+|+. ...|+..+|+||++-. ..+..+++..-.. .++ .+. +...
T Consensus 222 iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~ 301 (361)
T KOG1006|consen 222 IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSF 301 (361)
T ss_pred HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCH
Confidence 2 223444432 2358899999999311 1122222221100 011 112 2456
Q ss_pred HHHHHHHHccCcCCCCCCCHHHHHHH
Q 048535 318 KVLHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 318 ~l~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
.+..++..|+-.|-++||...++.++
T Consensus 302 ~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 302 SMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHHHHHHHhhcccccCcchhhhhcC
Confidence 78899999999999999999998764
No 377
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=4.3e-27 Score=238.00 Aligned_cols=236 Identities=24% Similarity=0.330 Sum_probs=183.7
Q ss_pred ccHHHHHHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEEc
Q 048535 103 VSYQEIHAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKK 179 (409)
Q Consensus 103 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 179 (409)
+.++.+-..+.-|.+.+.||.|.+|.||+++.. ++.+|+|+...... ..++...|.++|+.. +|||++.++|++..
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 345555567788999999999999999999876 88899999876533 235677899999888 89999999999863
Q ss_pred ----cCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEE
Q 048535 180 ----EKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNAR 255 (409)
Q Consensus 180 ----~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~k 255 (409)
.++.+|||||||.+||.-++++... ...+.|..+.-|+..++.||.+|| .+.++|||||-.|||++.++.+|
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VK 163 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVK 163 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEE
Confidence 2467999999999999999997654 668999999999999999999999 89999999999999999999999
Q ss_pred EecccCcccccCCc----eeeecccc-----------ccCCCcHHHHHHhhhccCcH--------HHH-----hhHHhhh
Q 048535 256 LGDFGLAKMHHHGQ----VMSGRRPI-----------EEGKRNLVDRMWSLTERSEL--------LSV-----LDERLKA 307 (409)
Q Consensus 256 l~DFGla~~~~~~~----~~~g~~p~-----------~~~~~~~~~~vws~~~~~~~--------~~~-----~~~~l~~ 307 (409)
|+|||++...+.+. ...|.+-. ....|+...|+|+++-...- .++ +-...+.
T Consensus 164 LvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRN 243 (953)
T KOG0587|consen 164 LVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN 243 (953)
T ss_pred EeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCC
Confidence 99999998766432 12222211 12456778899999532111 111 1011110
Q ss_pred ---cCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 048535 308 ---KGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 308 ---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
...-+..+.+++.+++..|+..|-.+||++.++++.
T Consensus 244 PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 244 PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred CCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 012356788999999999999999999999998753
No 378
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=2.1e-28 Score=255.74 Aligned_cols=226 Identities=26% Similarity=0.317 Sum_probs=177.2
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
.+-+++....||.|.||.||.|... |...|+|.++.. .....+...+|+.+|..++|||+|+++|+-.. ++..+|
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH-Rekv~I 1311 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH-REKVYI 1311 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec-HHHHHH
Confidence 3456778899999999999999876 899999998755 33345667899999999999999999998887 778999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
.||||++|+|.+.+.. +...++.....+..|++.|++||| +.+||||||||.||+|+.+|.+|++|||.|....
T Consensus 1312 FMEyC~~GsLa~ll~~---gri~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEH---GRIEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHHHhccCcHHHHHHh---cchhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEec
Confidence 9999999999999843 344677777888999999999999 8999999999999999999999999999998765
Q ss_pred CCc--------eeeecccccc---------CCCcHHHHHHhhhcc-------CcH-------HHHh-hHHhhhcCCCCHH
Q 048535 267 HGQ--------VMSGRRPIEE---------GKRNLVDRMWSLTER-------SEL-------LSVL-DERLKAKGGYADE 314 (409)
Q Consensus 267 ~~~--------~~~g~~p~~~---------~~~~~~~~vws~~~~-------~~~-------~~~~-~~~l~~~~~~~~~ 314 (409)
... -+.|.+.+.. ....-++|+|+++.- ... ++++ .-.....+.+|..
T Consensus 1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ 1465 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPER 1465 (1509)
T ss_pred CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchh
Confidence 432 2233333221 233456899998311 111 1111 1122233667788
Q ss_pred HHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 048535 315 VVEKVLHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 315 ~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
...+-.+++.+|++.||+.|-++.|+++.
T Consensus 1466 ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1466 LSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred hhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 88889999999999999999988888765
No 379
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.95 E-value=4.3e-27 Score=216.96 Aligned_cols=200 Identities=19% Similarity=0.119 Sum_probs=145.8
Q ss_pred CCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCCHHHHHh
Q 048535 124 GGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGSLDKWIF 201 (409)
Q Consensus 124 G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~ 201 (409)
|.||.||++... ++.||+|.++... .+.+|...+....||||+++++++.+ ....++||||+++|+|.+++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVS-EDSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheec-CCeEEEEEecCCCCCHHHHHH
Confidence 899999999986 8999999997543 23345555566679999999999887 678999999999999999985
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee----eecccc
Q 048535 202 ECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM----SGRRPI 277 (409)
Q Consensus 202 ~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~----~g~~p~ 277 (409)
. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++|||++......... ....+.
T Consensus 78 ~---~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aP 151 (237)
T cd05576 78 K---FLNIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAP 151 (237)
T ss_pred H---hcCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCC
Confidence 4 235899999999999999999999 899999999999999999999999999987655432100 001111
Q ss_pred c---cCCCcHHHHHHhhhccCcHHHHhhHHhhh-----------cCCCCHHHHHHHHHHHHHccCcCCCCCCCH
Q 048535 278 E---EGKRNLVDRMWSLTERSELLSVLDERLKA-----------KGGYADEVVEKVLHLGLLCAHPEANSRPTI 337 (409)
Q Consensus 278 ~---~~~~~~~~~vws~~~~~~~~~~~~~~l~~-----------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 337 (409)
+ ...++...|+|+++ ..+++++...... ....+......+.+++.+|++.||++||++
T Consensus 152 E~~~~~~~~~~~DvwslG--~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 152 EVGGISEETEACDWWSLG--AILFELLTGKTLVECHPSGINTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred cccCCCCCCchhhHHHHH--HHHHHHHHCcchhhcCchhcccccccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence 1 23456678999985 2233333221100 001222334556677777777777777765
No 380
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.95 E-value=6.2e-28 Score=217.79 Aligned_cols=233 Identities=23% Similarity=0.260 Sum_probs=170.8
Q ss_pred HhCCCCcc-ceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEEc---cCCe
Q 048535 111 ATKGFSEE-NVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKK---EKES 183 (409)
Q Consensus 111 ~~~~f~~~-~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~---~~~~ 183 (409)
.|++|++. ++||-|-.|.|..+..+ ++.+|+|++... ....+|+++.-.. .|||||+++++|.. ....
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45667654 67999999999999887 899999998633 3445788876655 79999999998863 2346
Q ss_pred EEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC---CCcEEEeccc
Q 048535 184 LILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK---KMNARLGDFG 260 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~---~~~~kl~DFG 260 (409)
+.+|||.|+||.|.+.+.+. ..+.+++.++-.|+.||+.|+.||| +.+|.||||||+|+|... |..+||+|||
T Consensus 134 LLiVmE~meGGeLfsriq~~-g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDR-GDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eEeeeecccchHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEecccc
Confidence 88999999999999999763 4567999999999999999999999 899999999999999965 4568999999
Q ss_pred CcccccCCc-eeeec-ccc-------ccCCCcHHHHHHhhhccC----------------cH-----HHHhhHHhhhcCC
Q 048535 261 LAKMHHHGQ-VMSGR-RPI-------EEGKRNLVDRMWSLTERS----------------EL-----LSVLDERLKAKGG 310 (409)
Q Consensus 261 la~~~~~~~-~~~g~-~p~-------~~~~~~~~~~vws~~~~~----------------~~-----~~~~~~~l~~~~~ 310 (409)
+|+...... +.|.- .|+ ....|+...|+|+++..- .+ ..+......++.+
T Consensus 210 FAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~p 289 (400)
T KOG0604|consen 210 FAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEP 289 (400)
T ss_pred cccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCCh
Confidence 999866332 22211 111 124566667788873110 00 1111122222233
Q ss_pred CCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH--HhcCcCCCC
Q 048535 311 YADEVVEKVLHLGLLCAHPEANSRPTIRQVLKM--LEGQTEGTG 352 (409)
Q Consensus 311 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~~~~~ 352 (409)
...+.++...++++..|.-+|.+|-|+.++++. +......|.
T Consensus 290 EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~ 333 (400)
T KOG0604|consen 290 EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQ 333 (400)
T ss_pred hHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCC
Confidence 345667788899999999999999999998863 444444443
No 381
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=7e-28 Score=219.55 Aligned_cols=245 Identities=20% Similarity=0.249 Sum_probs=188.3
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
-++|+..++||+|.||.|.+++-+ ++.+|+|+++++ .......-+.|-++|+..+||.+..+--.|.. ..++|.
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt-~drlCF 245 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT-QDRLCF 245 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc-CceEEE
Confidence 367889999999999999999887 899999999876 33344556789999999999999887666665 789999
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
||||..||.|.-+|. ....+++.....+-..|+.||.||| +++||.||||.+|.|||.+|.+||+||||++..-
T Consensus 246 VMeyanGGeLf~HLs---rer~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 246 VMEYANGGELFFHLS---RERVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEEccCceEeeehh---hhhcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhcc
Confidence 999999999998884 3456899999999999999999999 8999999999999999999999999999998643
Q ss_pred C----Cceeeecccc------ccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCC
Q 048535 267 H----GQVMSGRRPI------EEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPT 336 (409)
Q Consensus 267 ~----~~~~~g~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt 336 (409)
. ....+|.+.+ +...|.-..|.|-++ -..++++..+++. ....-..+.+|++.|=-.-|..
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~G--VVMYEMmCGRLPF----yn~dh~kLFeLIl~ed~kFPr~--- 390 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVG--VVMYEMMCGRLPF----YNKDHEKLFELILMEDLKFPRT--- 390 (516)
T ss_pred cccceeccccCChhhcCchhhccccccceeehhhhh--HHHHHHHhccCcc----cccchhHHHHHHHhhhccCCcc---
Confidence 2 2255666543 345677777888876 4567888888753 3333456677766553333321
Q ss_pred HHHHHHHHhcCcCCCCCCCCCcchhHHhhhcccCCCCccc-----ccccCCCCCccccc
Q 048535 337 IRQVLKMLEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWK-----FAGSRGHPTFNEIN 390 (409)
Q Consensus 337 ~~evl~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~hp~~~~~~ 390 (409)
-.+ ....+|..++..||.+|.. ..+++.|+||..|+
T Consensus 391 -----------------ls~-eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~ 431 (516)
T KOG0690|consen 391 -----------------LSP-EAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVD 431 (516)
T ss_pred -----------------CCH-HHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCC
Confidence 111 1245666666666766665 45888999998887
No 382
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.94 E-value=6.2e-27 Score=217.79 Aligned_cols=269 Identities=19% Similarity=0.216 Sum_probs=186.1
Q ss_pred HhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCC-C-Cc----eeeEeeEEEccCC
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLK-H-RN----LVGLRGWCKKEKE 182 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H-~n----iv~l~g~~~~~~~ 182 (409)
.+++|.+.+.+|+|.||.|-.+.+. +..||||+++.- ....+.-+-|+++|.++. + || +|++.+||.- .+
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy-rg 164 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY-RG 164 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc-cC
Confidence 4788999999999999999999987 788999999743 344566778999999993 2 33 7888888877 78
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC------------
Q 048535 183 SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK------------ 250 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~------------ 250 (409)
+.|||+|.+ |-|++++|.++ +-.+++...+..|+.|++++++||| +.+++|-||||+|||+.+
T Consensus 165 hiCivfell-G~S~~dFlk~N-~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 165 HICIVFELL-GLSTFDFLKEN-NYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred ceEEEEecc-ChhHHHHhccC-CccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCc
Confidence 999999998 55999999763 4567999999999999999999999 899999999999999932
Q ss_pred --------CCcEEEecccCcccccCCc--eeeecccc-----ccCCCcHHHHHHhhhcc--------------C--cHHH
Q 048535 251 --------KMNARLGDFGLAKMHHHGQ--VMSGRRPI-----EEGKRNLVDRMWSLTER--------------S--ELLS 299 (409)
Q Consensus 251 --------~~~~kl~DFGla~~~~~~~--~~~g~~p~-----~~~~~~~~~~vws~~~~--------------~--~~~~ 299 (409)
+..+||.|||.|....... +++.+..- -.-.++...|+||++.- . +-..
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLa 319 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLA 319 (415)
T ss_pred cceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHH
Confidence 2348999999998765443 33333221 12467888999998411 0 1112
Q ss_pred HhhHHhhhcCCCCHHHHHHH---HHHHHHccCcC--CCCC--CCHHHHHHHHhcCcCCCCCCCCCcchhHHhhhcccCCC
Q 048535 300 VLDERLKAKGGYADEVVEKV---LHLGLLCAHPE--ANSR--PTIRQVLKMLEGQTEGTGLEDEGMNVHLLKRIGTRAMT 372 (409)
Q Consensus 300 ~~~~~l~~~~~~~~~~~~~l---~~l~~~Cl~~d--P~~R--Pt~~evl~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 372 (409)
++...+ +++|...+.+. .-+-..|++++ -..| -...+..+-|+...... ......-+||+++|+..||+
T Consensus 320 MMerIl---Gp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~-d~e~~~LfDLl~~mL~fDP~ 395 (415)
T KOG0671|consen 320 MMERIL---GPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQD-DLEHVQLFDLLRRMLEFDPA 395 (415)
T ss_pred HHHHhh---CCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccC-cHHHhHHHHHHHHHHccCcc
Confidence 333222 34444433322 11112233321 1111 11111122222222211 12222348999999999999
Q ss_pred CcccccccCCCCCccccc
Q 048535 373 SSWKFAGSRGHPTFNEIN 390 (409)
Q Consensus 373 ~~~~~~~~~~hp~~~~~~ 390 (409)
+|+|+.+++.||||+...
T Consensus 396 ~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 396 RRITLREALSHPFFARLT 413 (415)
T ss_pred ccccHHHHhcCHHhhcCC
Confidence 999999999999998643
No 383
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=6.4e-28 Score=215.15 Aligned_cols=261 Identities=20% Similarity=0.298 Sum_probs=192.9
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC----CeEEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK----ESLIL 186 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~l 186 (409)
.+..+-||-|+||.||-.++. |+.||.|++..- +-...+.+.+|+.+|..++|.|++..++...... +++|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 344678999999999999987 999999998643 2334578999999999999999999888664311 24688
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
++|.|.. +|.+.| -..+.++.+.+.-+..||++||.||| +.+|.||||||.|.|+++|...||||||+||..+
T Consensus 135 ~TELmQS-DLHKII---VSPQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 135 LTELMQS-DLHKII---VSPQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHHHh-hhhhee---ccCCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccc
Confidence 9999866 898888 45678999999999999999999999 8999999999999999999999999999999876
Q ss_pred CCc-------eeeec-cc----cccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCC
Q 048535 267 HGQ-------VMSGR-RP----IEEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSR 334 (409)
Q Consensus 267 ~~~-------~~~g~-~p----~~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R 334 (409)
.++ ++|.. +. .....|+-..|+|+.+ ....+++..++.+....+.+..+-+.++. --
T Consensus 208 ~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVG--CIFaELLgRrILFQAq~PiqQL~lItdLL---------GT 276 (449)
T KOG0664|consen 208 QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVG--CIFAELLQRKILFQAAGPIEQLQMIIDLL---------GT 276 (449)
T ss_pred hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhh--HHHHHHHhhhhhhhccChHHHHHHHHHHh---------CC
Confidence 543 11110 00 1123456677899987 55667777776655555656655555553 34
Q ss_pred CCHHHHHHHHhc--------CcCCCCCC----------CCCcchhHHhhhcccCCCCcccccccCCCCCcccccccc
Q 048535 335 PTIRQVLKMLEG--------QTEGTGLE----------DEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINKNR 393 (409)
Q Consensus 335 Pt~~evl~~L~~--------~~~~~~~~----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~~~ 393 (409)
||++..-..-|+ -.+.|..+ ......+++..++..+|.+|++.++++.|++..+.....
T Consensus 277 Ps~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~r~ 353 (449)
T KOG0664|consen 277 PSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRLRF 353 (449)
T ss_pred CcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccceee
Confidence 666655443333 22222111 011237899999999999999999999999888766443
No 384
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=8e-27 Score=220.12 Aligned_cols=222 Identities=23% Similarity=0.301 Sum_probs=166.3
Q ss_pred CCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-------ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-------SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESL 184 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-------~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 184 (409)
+|-...+||+|||+.||++.+. .+-||||+-... .....+...+|.++.+.|+||.||++++|+.-+.+.+
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 4555678999999999999876 788999987543 1112345678999999999999999999998767889
Q ss_pred EEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeC---CCCcEEEecccC
Q 048535 185 ILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLD---KKMNARLGDFGL 261 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~---~~~~~kl~DFGl 261 (409)
|-|+|||+|.+|+-||.. ...+++.++..|+.||+.||.||.+. ..+|||-||||.||||- .-|.+||+||||
T Consensus 544 CTVLEYceGNDLDFYLKQ---hklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQ---HKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred eeeeeecCCCchhHHHHh---hhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 999999999999999953 45689999999999999999999976 78999999999999994 357899999999
Q ss_pred cccccCCc------------------------eeeeccccccCCCcHHHHHHhhhcc--------------CcHHHHhhH
Q 048535 262 AKMHHHGQ------------------------VMSGRRPIEEGKRNLVDRMWSLTER--------------SELLSVLDE 303 (409)
Q Consensus 262 a~~~~~~~------------------------~~~g~~p~~~~~~~~~~~vws~~~~--------------~~~~~~~~~ 303 (409)
+++++.+. .+.|+. +...+-+.|||+++.. ..-.+++..
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgke---PPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqe 696 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKE---PPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQE 696 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCC---CCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhh
Confidence 99887543 112222 2345667789987311 001111111
Q ss_pred H--hhh-c--CCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 304 R--LKA-K--GGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 304 ~--l~~-~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
. +.. . -+..+....+...++.+|++..-++|-...++..
T Consensus 697 NTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 697 NTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred hchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 0 100 0 1112344567889999999999999988777643
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.93 E-value=1.8e-25 Score=204.67 Aligned_cols=211 Identities=27% Similarity=0.361 Sum_probs=160.8
Q ss_pred CceEEEEEEEC--CcEEEEEEeccCChHH-HHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCCHHHHHh
Q 048535 125 GNGKVYKGQLL--GVEVALKRISLDSEHG-MREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGSLDKWIF 201 (409)
Q Consensus 125 ~fg~Vy~~~~~--~~~vAvK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~ 201 (409)
+||.||+|... ++.+|+|++....... .+.+.+|++.+++++|+||+++++++.. ....++++||+++++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-EDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-CCEEEEEEeCCCCCCHHHHHH
Confidence 58999999997 6999999997664433 6789999999999999999999999987 678999999999999999985
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCc---eeeecc---
Q 048535 202 ECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQ---VMSGRR--- 275 (409)
Q Consensus 202 ~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~---~~~g~~--- 275 (409)
.. ..+++..+..++.++++++.||| +.+++|+||+|+||++++++.++|+|||++....... ...+..
T Consensus 80 ~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 153 (244)
T smart00220 80 KR---GRLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYM 153 (244)
T ss_pred hc---cCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCC
Confidence 42 23899999999999999999999 7899999999999999999999999999998765531 111111
Q ss_pred ccc---cCCCcHHHHHHhhhcc--------------CcHHHHhhHHhhhcCCCCHH---HHHHHHHHHHHccCcCCCCCC
Q 048535 276 PIE---EGKRNLVDRMWSLTER--------------SELLSVLDERLKAKGGYADE---VVEKVLHLGLLCAHPEANSRP 335 (409)
Q Consensus 276 p~~---~~~~~~~~~vws~~~~--------------~~~~~~~~~~l~~~~~~~~~---~~~~l~~l~~~Cl~~dP~~RP 335 (409)
+.+ ....+...|+|+++.- .......+............ ....+.+++.+||..+|++||
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 233 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRL 233 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhcc
Confidence 111 1334557888887311 11111111111110111111 556789999999999999999
Q ss_pred CHHHHHH
Q 048535 336 TIRQVLK 342 (409)
Q Consensus 336 t~~evl~ 342 (409)
++.++++
T Consensus 234 ~~~~~~~ 240 (244)
T smart00220 234 TAEEALQ 240 (244)
T ss_pred CHHHHhh
Confidence 9999986
No 386
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.93 E-value=7.3e-25 Score=195.53 Aligned_cols=199 Identities=30% Similarity=0.489 Sum_probs=162.1
Q ss_pred eecCCceEEEEEEEC--CcEEEEEEeccCChH-HHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCCHH
Q 048535 121 IGLGGNGKVYKGQLL--GVEVALKRISLDSEH-GMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGSLD 197 (409)
Q Consensus 121 lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gsL~ 197 (409)
||+|++|.||++... ++.+++|++...... ..+.+.+|+..++.++|++++++++++.. ....++++||+++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFED-ENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeec-CCeEEEEEecCCCCcHH
Confidence 689999999999998 899999999766432 45679999999999999999999999987 57899999999999999
Q ss_pred HHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC-CCcEEEecccCcccccCCc----eee
Q 048535 198 KWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK-KMNARLGDFGLAKMHHHGQ----VMS 272 (409)
Q Consensus 198 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~-~~~~kl~DFGla~~~~~~~----~~~ 272 (409)
+++.... ..+++..+..++.+++++|.||| ..+++|+||+|.||+++. ++.++|+|||.+....... ...
T Consensus 80 ~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (215)
T cd00180 80 DLLKENE--GKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIV 154 (215)
T ss_pred HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhccc
Confidence 9995421 46899999999999999999999 789999999999999999 8999999999998665432 001
Q ss_pred ecc---ccc---cC-CCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 048535 273 GRR---PIE---EG-KRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 273 g~~---p~~---~~-~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
+.. +.+ .. ..+...|+|+++. .+.++ ..+.+++..|++.||++||++.++++.
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~--~~~~l----------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGV--ILYEL----------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHH--HHHHH----------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 111 111 12 4456678888751 22222 678999999999999999999999864
No 387
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.93 E-value=2.7e-26 Score=197.35 Aligned_cols=181 Identities=21% Similarity=0.327 Sum_probs=148.8
Q ss_pred HHHHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC-ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCe
Q 048535 108 IHAATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD-SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKES 183 (409)
Q Consensus 108 l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 183 (409)
+....++......||+|++|.|-+-++. |...|+|+++.. ..+..++.++|+.+..+. .+|.+|.++|.... ...
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r-egd 119 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR-EGD 119 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc-ccc
Confidence 3445566666789999999998777765 999999999866 455667889999976655 89999999998877 678
Q ss_pred EEEEEEeCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 184 LILIYDYMENGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
.++.||.|.. ||+.+-.+. .....+++..+-+|+..+.+||.|||+ ...+||||+||+||||+.+|++||||||.+
T Consensus 120 vwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 120 VWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGIS 196 (282)
T ss_pred EEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccc
Confidence 9999999966 888775432 455679999999999999999999997 689999999999999999999999999999
Q ss_pred ccccCCc---eeeecccccc----------CCCcHHHHHHhhh
Q 048535 263 KMHHHGQ---VMSGRRPIEE----------GKRNLVDRMWSLT 292 (409)
Q Consensus 263 ~~~~~~~---~~~g~~p~~~----------~~~~~~~~vws~~ 292 (409)
..+.++- +-+|-.|+.. ..|+..+|+|++.
T Consensus 197 G~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLG 239 (282)
T KOG0984|consen 197 GYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLG 239 (282)
T ss_pred eeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhh
Confidence 8776543 3445555432 4688999999997
No 388
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.93 E-value=7.9e-27 Score=203.47 Aligned_cols=269 Identities=19% Similarity=0.280 Sum_probs=187.0
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCC-CCceeeEeeEEEccC-CeEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLK-HRNLVGLRGWCKKEK-ESLILI 187 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~-~~~~lv 187 (409)
.++|++.+++|+|.|+.||.|... .++++||.++.- ..+.+.+|+.+|..|. ||||+++++...+.. ....||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 467888999999999999999864 889999999743 3467889999999996 999999999887632 346799
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC-CcEEEecccCccccc
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK-MNARLGDFGLAKMHH 266 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~-~~~kl~DFGla~~~~ 266 (409)
+||+.+.+...+. ..++-..+..++.++++||.|+| +.||+|||+||.|++||.. -..+|+|.|||.+..
T Consensus 114 FE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 114 FEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 9999998877765 34777888999999999999999 9999999999999999875 459999999999988
Q ss_pred CCceee---------eccc-cccCCCcHHHHHHhhhccCcHHHHhhHH-hhhcCCCCHHHHHHHHHHH------HHccCc
Q 048535 267 HGQVMS---------GRRP-IEEGKRNLVDRMWSLTERSELLSVLDER-LKAKGGYADEVVEKVLHLG------LLCAHP 329 (409)
Q Consensus 267 ~~~~~~---------g~~p-~~~~~~~~~~~vws~~~~~~~~~~~~~~-l~~~~~~~~~~~~~l~~l~------~~Cl~~ 329 (409)
.+.-.. |..- .+...|+..-|+||++ +-+..++-.+ .-+.+....+..-++.++. .-.-..
T Consensus 185 p~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~G--cmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY 262 (338)
T KOG0668|consen 185 PGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLG--CMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKY 262 (338)
T ss_pred CCceeeeeeehhhcCCchheeechhccccHHHHHHH--HHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHH
Confidence 765221 2111 1224566777999996 3333333221 1111222333322222211 000011
Q ss_pred CCCCCCCHHHHHHHHhcC-----cC--CCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCccccccccCC
Q 048535 330 EANSRPTIRQVLKMLEGQ-----TE--GTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEINKNRSS 395 (409)
Q Consensus 330 dP~~RPt~~evl~~L~~~-----~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~~~~~~ 395 (409)
.-.--|.+.+++..-..- .. ...+. .....|++.+++.+|...|.|+.+++.||||..+....++
T Consensus 263 ~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~-~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~~~~ 334 (338)
T KOG0668|consen 263 QIDLDPQFEDILGRHSRKPWSRFINSENQHLV-SPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREAESS 334 (338)
T ss_pred ccCCChhHhhHhhccccccHHHhCCccccccC-ChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHHhhc
Confidence 112234455555433221 11 11111 1134899999999999999999999999999987754443
No 389
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.93 E-value=3.2e-25 Score=233.32 Aligned_cols=147 Identities=25% Similarity=0.346 Sum_probs=132.0
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
++|.+.+.||+|+||.||+|.+. ++.||||+++.. .......+..|+.++..++||||+++++++.. ....|+|
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS-ANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-CCEEEEE
Confidence 67889999999999999999998 899999999753 23445678899999999999999999998876 6789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
|||+++|+|.+++.. ...+++..++.++.||+.||.||| ..+|+||||||+|||++.++.+||+|||+++...
T Consensus 83 mEy~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~ 155 (669)
T cd05610 83 MEYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTL 155 (669)
T ss_pred EeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCcccc
Confidence 999999999999954 245889999999999999999999 7899999999999999999999999999998653
No 390
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=1.3e-26 Score=228.32 Aligned_cols=251 Identities=22% Similarity=0.282 Sum_probs=192.5
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
....+|.....+|.|.||.|||+++. ++..|+|.++........-..+|+-+++..+|||||.++|.+.. ...+++.
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr-~dklwic 90 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR-RDKLWIC 90 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhh-hcCcEEE
Confidence 34577888999999999999999987 89999999998876777788899999999999999999999887 7789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
||||.+|+|++.-+ ..+++++.++..+++...+||.||| +.+-+|||||-.|||+++.|.+|++|||.+..+..
T Consensus 91 MEycgggslQdiy~---~TgplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEecCCCcccceee---ecccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhh
Confidence 99999999998763 4568999999999999999999999 89999999999999999999999999999876543
Q ss_pred Cc----eeeeccccc---------cCCCcHHHHHHhhhccCcHHH----------------HhhHHhhhc--CCCCHHHH
Q 048535 268 GQ----VMSGRRPIE---------EGKRNLVDRMWSLTERSELLS----------------VLDERLKAK--GGYADEVV 316 (409)
Q Consensus 268 ~~----~~~g~~p~~---------~~~~~~~~~vws~~~~~~~~~----------------~~~~~l~~~--~~~~~~~~ 316 (409)
.- -.-|++... .+.|+...|+|.......-.. ++....... ..-...+.
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws 244 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWS 244 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccch
Confidence 21 222333221 267888899998853322111 111100000 01223567
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCCCCCCCCCcchhHHhhhcccCC
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEGTGLEDEGMNVHLLKRIGTRAM 371 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~~~~l~~~~~~~~ 371 (409)
+.+-++++.|+-.+|++|||+..+++ ......+ -+....+++|++..+.++
T Consensus 245 ~~fh~fvK~altknpKkRptaeklL~--h~fvs~~--l~~rl~~eLLdK~n~P~~ 295 (829)
T KOG0576|consen 245 EFFHNFVKGALTKNPKKRPTAEKLLQ--HPFVSQT--LSRRLAIELLDKVNNPNP 295 (829)
T ss_pred HHHHHHHHHHhcCCCccCCChhhhee--ceeeccc--hhhHHHHHHHHHccCCCC
Confidence 78899999999999999999998876 2222222 223345677777766653
No 391
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=1.4e-25 Score=219.53 Aligned_cols=154 Identities=22% Similarity=0.320 Sum_probs=131.8
Q ss_pred cHHHHHHHh---CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccCCCCceeeEee
Q 048535 104 SYQEIHAAT---KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRLKHRNLVGLRG 175 (409)
Q Consensus 104 ~~~~l~~~~---~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g 175 (409)
.|..|+++. .-|..++.||-|+||+|.++... ...+|.|.+++.+ ..+......|-.||...+++.||+|+-
T Consensus 617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 444555443 45888899999999999998765 6779999997653 233445678999999999999999998
Q ss_pred EEEccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEE
Q 048535 176 WCKKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNAR 255 (409)
Q Consensus 176 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~k 255 (409)
.|.+ ++.+|+||||++||++-.+|.. .+-+.+..+..++.++..|+++.| ..++|||||||+|||||.+|.+|
T Consensus 697 SFQD-kdnLYFVMdYIPGGDmMSLLIr---mgIFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIK 769 (1034)
T KOG0608|consen 697 SFQD-KDNLYFVMDYIPGGDMMSLLIR---MGIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIK 769 (1034)
T ss_pred Eecc-CCceEEEEeccCCccHHHHHHH---hccCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCcee
Confidence 8887 8899999999999999999853 356888889999999999999999 89999999999999999999999
Q ss_pred EecccCccc
Q 048535 256 LGDFGLAKM 264 (409)
Q Consensus 256 l~DFGla~~ 264 (409)
|+||||+.-
T Consensus 770 LTDFGLCTG 778 (1034)
T KOG0608|consen 770 LTDFGLCTG 778 (1034)
T ss_pred eeecccccc
Confidence 999999864
No 392
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.6e-25 Score=220.93 Aligned_cols=217 Identities=19% Similarity=0.189 Sum_probs=162.9
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
++.|.....+|.|+|+.|-.+... ++..+||++.... .+-.+|+.++... +||||+++.+.+.+ +.+.|+||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~-~~~~~~v~ 395 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYED-GKEIYLVM 395 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecC-Cceeeeee
Confidence 567888888999999999999887 8889999997552 2234678777666 89999999999987 77899999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeee-CCCCcEEEecccCcccccC
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLL-DKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl-~~~~~~kl~DFGla~~~~~ 267 (409)
|++.+|-|.+.+... +....++..|+.+|+.|+.||| ++++|||||||+|||+ ++.++++|+|||.++....
T Consensus 396 e~l~g~ell~ri~~~----~~~~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSK----PEFCSEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred hhccccHHHHHHHhc----chhHHHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 999999888877432 2223778889999999999999 8999999999999999 6899999999999998766
Q ss_pred Cc----eeeeccc---cccCCCcHHHHHHhhhccCcHHHHhhHHhhh--------------cCCCCHHHHHHHHHHHHHc
Q 048535 268 GQ----VMSGRRP---IEEGKRNLVDRMWSLTERSELLSVLDERLKA--------------KGGYADEVVEKVLHLGLLC 326 (409)
Q Consensus 268 ~~----~~~g~~p---~~~~~~~~~~~vws~~~~~~~~~~~~~~l~~--------------~~~~~~~~~~~l~~l~~~C 326 (409)
.- +..+..+ .....++...|+|+++ .-+++++.+.... .+.+....+....+|+.+|
T Consensus 469 ~~~tp~~t~~y~APEvl~~~~yt~acD~WSLG--vlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s~~vS~~AKdLl~~L 546 (612)
T KOG0603|consen 469 SCDTPALTLQYVAPEVLAIQEYTEACDWWSLG--VLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFSECVSDEAKDLLQQL 546 (612)
T ss_pred hhcccchhhcccChhhhccCCCCcchhhHHHH--HHHHHHHhCCCccccCCchHHHHHhhcCCccccccCHHHHHHHHHh
Confidence 51 1111111 1235678899999984 2233333222111 1334455666777777777
Q ss_pred cCcCCCCCCCHHHHHH
Q 048535 327 AHPEANSRPTIRQVLK 342 (409)
Q Consensus 327 l~~dP~~RPt~~evl~ 342 (409)
|+.||.+||+|.++..
T Consensus 547 L~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 547 LQVDPALRLGADEIGA 562 (612)
T ss_pred ccCChhhCcChhhhcc
Confidence 7777777777777754
No 393
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.92 E-value=6.2e-26 Score=217.80 Aligned_cols=268 Identities=19% Similarity=0.209 Sum_probs=191.9
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCC------CCceeeEeeEEEccCCe
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLK------HRNLVGLRGWCKKEKES 183 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~g~~~~~~~~ 183 (409)
-..|.+....|+|-|++|.+|.+. |..||||+|... .-..+.=+.|+++|++|+ --|+++++..|.. .++
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h-knH 508 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH-KNH 508 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh-cce
Confidence 466888888999999999999987 889999999865 233355678999999995 3478999888877 789
Q ss_pred EEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC-cEEEecccCc
Q 048535 184 LILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM-NARLGDFGLA 262 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~-~~kl~DFGla 262 (409)
+|||+|-+.- +|.+.|.....+..|....+..++.|+.-||..|- ..+|+|.||||.|||+++.. .+||||||.|
T Consensus 509 LClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 509 LCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred eEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCccc
Confidence 9999998855 99999988777788999999999999999999999 89999999999999998865 5899999999
Q ss_pred ccccCCcee---ee-----ccccccCCCcHHHHHHhhhccCcHHHHhhHHhhhcCCCCHHHHHHHHHH------------
Q 048535 263 KMHHHGQVM---SG-----RRPIEEGKRNLVDRMWSLTERSELLSVLDERLKAKGGYADEVVEKVLHL------------ 322 (409)
Q Consensus 263 ~~~~~~~~~---~g-----~~p~~~~~~~~~~~vws~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l------------ 322 (409)
......++. .. ..-+-.-.|+..-|+|+.+ +.++++....+.+++.....+..-++++
T Consensus 585 ~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvg--ctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKg 662 (752)
T KOG0670|consen 585 SFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVG--CTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKG 662 (752)
T ss_pred cccccccccHHHHHHhccCcceeecCcccCCccceeec--eeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhc
Confidence 877655411 01 1111224566777899986 4555555554444333333322211111
Q ss_pred --H-----HHc----cCcCC-----------CCCCCHHHHHHHHhcCcCCCCCCCCC--cchhHHhhhcccCCCCccccc
Q 048535 323 --G-----LLC----AHPEA-----------NSRPTIRQVLKMLEGQTEGTGLEDEG--MNVHLLKRIGTRAMTSSWKFA 378 (409)
Q Consensus 323 --~-----~~C----l~~dP-----------~~RPt~~evl~~L~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~ 378 (409)
. ..| .+.|+ .--|| +++...|.+....+...+.. ...+||.+|+.-+|.+|+++.
T Consensus 663 qF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPt-kdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~n 741 (752)
T KOG0670|consen 663 QFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPT-KDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVN 741 (752)
T ss_pred chhhhhcccccceEEEeccccccceeEEEecccCcc-hhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHH
Confidence 0 001 11111 11132 45555565543333322221 237999999999999999999
Q ss_pred ccCCCCCccc
Q 048535 379 GSRGHPTFNE 388 (409)
Q Consensus 379 ~~~~hp~~~~ 388 (409)
+++.||||++
T Consensus 742 qAL~HpFi~~ 751 (752)
T KOG0670|consen 742 QALKHPFITE 751 (752)
T ss_pred HHhcCCcccC
Confidence 9999999974
No 394
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.92 E-value=2.8e-25 Score=202.51 Aligned_cols=263 Identities=19% Similarity=0.256 Sum_probs=182.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccC-----C
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEK-----E 182 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~ 182 (409)
..+|...+.+|.|.- .|.-+.+. +++||+|+.... .....++..+|..++..++|+||++++.++.... .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 356667778888887 66666655 899999998543 3334567789999999999999999999887422 3
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 183 SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
..|+|||||.. +|.+.+. ..++-..+..+..|++.|+.||| +.+|+||||||+||++..++.+||.|||+|
T Consensus 95 e~y~v~e~m~~-nl~~vi~-----~elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVIL-----MELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred hHHHHHHhhhh-HHHHHHH-----HhcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhh
Confidence 58999999966 9999885 24777888999999999999999 899999999999999999999999999999
Q ss_pred ccccCCceeeec-------cc--cccCCCcHHHHHHhhhccCcHHHHhhHHh---------------hhcCCCCHHHHHH
Q 048535 263 KMHHHGQVMSGR-------RP--IEEGKRNLVDRMWSLTERSELLSVLDERL---------------KAKGGYADEVVEK 318 (409)
Q Consensus 263 ~~~~~~~~~~g~-------~p--~~~~~~~~~~~vws~~~~~~~~~~~~~~l---------------~~~~~~~~~~~~~ 318 (409)
+....+-.+|.. .| .-...+....|+|+.+ +...+++...+ ...+..++....+
T Consensus 166 r~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvG--ci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 166 RTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG--CIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred cccCcccccCchhheeeccCchheeccCCcccchhhhhh--hHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 977665222211 01 0113366778999985 22333322222 2223445555555
Q ss_pred HHHHHHHccCcCCCCC-CCHHHHHHH--HhcCcCCCCCCCCCcchhHHhhhcccCCCCcccccccCCCCCcc
Q 048535 319 VLHLGLLCAHPEANSR-PTIRQVLKM--LEGQTEGTGLEDEGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFN 387 (409)
Q Consensus 319 l~~l~~~Cl~~dP~~R-Pt~~evl~~--L~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~ 387 (409)
+...+..-....|+.- -++.+.+.- .....+.+ ..+..+.+|++.+|+..+|.+|++.+++++||+++
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~-~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGS-KLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCC-ccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 5555554444222111 122222110 01111111 23334569999999999999999999999999775
No 395
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.91 E-value=1.4e-24 Score=218.98 Aligned_cols=217 Identities=26% Similarity=0.350 Sum_probs=151.4
Q ss_pred CCccceeecCCceE-EEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 115 FSEENVIGLGGNGK-VYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 115 f~~~~~lG~G~fg~-Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
|...+.+|.|+.|+ ||+|.+.|+.||||++-.+. ..-..+|+..|+.- +|||||++++.-.+ ++..||..|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d-~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQD-RQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccC-CceEEEEehHhh
Confidence 55567899999875 79999999999999985432 23456899999888 79999999986665 788999999996
Q ss_pred CCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC---C--CcEEEecccCccccc
Q 048535 193 NGSLDKWIFEC-DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK---K--MNARLGDFGLAKMHH 266 (409)
Q Consensus 193 ~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~---~--~~~kl~DFGla~~~~ 266 (409)
. +|.+++... .......-...+.+..|++.||++|| +.+||||||||.||||+. + .+++|+|||+++...
T Consensus 587 ~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 587 C-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred h-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 6 999999652 11111111345678899999999999 899999999999999976 3 469999999999887
Q ss_pred CCce-------eeeccccc------cCCCcHHHHHHhhhcc------------CcHHHHhhHHhhhc-----CCCCHHHH
Q 048535 267 HGQV-------MSGRRPIE------EGKRNLVDRMWSLTER------------SELLSVLDERLKAK-----GGYADEVV 316 (409)
Q Consensus 267 ~~~~-------~~g~~p~~------~~~~~~~~~vws~~~~------------~~~~~~~~~~l~~~-----~~~~~~~~ 316 (409)
.++- .+|..... ........|+.+++.- ++.++--...+... -....++
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~d~- 741 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLPDC- 741 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCchH-
Confidence 6541 11211111 1222335566666211 11111100111100 0011122
Q ss_pred HHHHHHHHHccCcCCCCCCCHHHHH
Q 048535 317 EKVLHLGLLCAHPEANSRPTIRQVL 341 (409)
Q Consensus 317 ~~l~~l~~~Cl~~dP~~RPt~~evl 341 (409)
+..+|+.++++++|..||++.+|+
T Consensus 742 -eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 742 -EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred -HHHHHHHHhcCCCcccCCCHHHHh
Confidence 778999999999999999999997
No 396
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=4.3e-24 Score=206.70 Aligned_cols=142 Identities=18% Similarity=0.152 Sum_probs=114.5
Q ss_pred HHHhCCCCccceeecCCceEEEEEEEC---CcEEEEEEeccC-----ChHHHHHHHHHHHHhccCCCCceeeEeeEEEcc
Q 048535 109 HAATKGFSEENVIGLGGNGKVYKGQLL---GVEVALKRISLD-----SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKE 180 (409)
Q Consensus 109 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~---~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 180 (409)
....++|+..+.||+|+||+||+|.+. ++.||||++... .....+.|.+|+++|++++|+|+++.+..
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---- 89 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---- 89 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----
Confidence 345678999999999999999999874 677899987532 22345679999999999999999853322
Q ss_pred CCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCC-CCCCeeeCCCCcEEEecc
Q 048535 181 KESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDI-KASNVLLDKKMNARLGDF 259 (409)
Q Consensus 181 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl-Kp~NILl~~~~~~kl~DF 259 (409)
.+..++||||+++++|.. +. .. . ...++.|+++||.||| +.+|+|||| ||+|||++.++.+||+||
T Consensus 90 ~~~~~LVmE~~~G~~L~~-~~---~~---~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 90 TGKDGLVRGWTEGVPLHL-AR---PH---G---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred cCCcEEEEEccCCCCHHH-hC---cc---c---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEEC
Confidence 235799999999999973 21 11 1 1467889999999999 899999999 999999999999999999
Q ss_pred cCcccccC
Q 048535 260 GLAKMHHH 267 (409)
Q Consensus 260 Gla~~~~~ 267 (409)
|+|+....
T Consensus 157 GlA~~~~~ 164 (365)
T PRK09188 157 QLASVFRR 164 (365)
T ss_pred ccceeccc
Confidence 99986543
No 397
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=4e-24 Score=200.46 Aligned_cols=216 Identities=18% Similarity=0.253 Sum_probs=165.0
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 185 (409)
..+|.....||+|+||.|.++..+ .+.+|||+++.+ ...+.+--+.|-++|... +-|.+++++.++.. -+++|
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT-mDRLy 426 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT-MDRLY 426 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh-hhhee
Confidence 357888999999999999999988 467999999876 223344456677888776 56788999987776 78899
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
.||||+.||+|--.+. .-+.+.+..+..++.+||-||-||| +++||.||||..|||||.+|.+||+|||+++..
T Consensus 427 FVMEyvnGGDLMyhiQ---Q~GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQ---QVGKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred eEEEEecCchhhhHHH---HhcccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeeccccccc
Confidence 9999999999988774 3456888899999999999999999 899999999999999999999999999999864
Q ss_pred cCCc----eeeeccccc------cCCCcHHHHHHhhh-------------ccCcHHHHhhHHhhhcCCCCHHHHHHHHHH
Q 048535 266 HHGQ----VMSGRRPIE------EGKRNLVDRMWSLT-------------ERSELLSVLDERLKAKGGYADEVVEKVLHL 322 (409)
Q Consensus 266 ~~~~----~~~g~~p~~------~~~~~~~~~vws~~-------------~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l 322 (409)
-.+. ..+|.+-+- ...|....|.|++. +.++-.++..........++...+.+...+
T Consensus 501 i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~i 580 (683)
T KOG0696|consen 501 IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAI 580 (683)
T ss_pred ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHH
Confidence 4332 455655432 25677888899873 112222333333333334566666677777
Q ss_pred HHHccCcCCCCC
Q 048535 323 GLLCAHPEANSR 334 (409)
Q Consensus 323 ~~~Cl~~dP~~R 334 (409)
....+...|.+|
T Consensus 581 ckg~ltK~P~kR 592 (683)
T KOG0696|consen 581 CKGLLTKHPGKR 592 (683)
T ss_pred HHHHhhcCCccc
Confidence 777777788777
No 398
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.90 E-value=6.3e-24 Score=200.21 Aligned_cols=270 Identities=24% Similarity=0.286 Sum_probs=187.3
Q ss_pred HHHHHhCCCCccceeecCCceEEEEEEEC-----CcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEEcc
Q 048535 107 EIHAATKGFSEENVIGLGGNGKVYKGQLL-----GVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKE 180 (409)
Q Consensus 107 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 180 (409)
.+....+.|..+++||.|.|++||++++. .+.||+|.+...+. .....+|+++|..+ .+.||+++.+++..
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rn- 106 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRN- 106 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhcc-
Confidence 34455678999999999999999999764 57899999975532 24588999999999 69999999998876
Q ss_pred CCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC-CcEEEecc
Q 048535 181 KESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK-MNARLGDF 259 (409)
Q Consensus 181 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~-~~~kl~DF 259 (409)
++...+|+||++.-.-.++.. .++..++..++..+..||.++| .++||||||||+|+|.+.. +.-.|.||
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDF 177 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYR------SLSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDF 177 (418)
T ss_pred CCeeEEEecccCccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEec
Confidence 778999999999999999883 3778899999999999999999 8999999999999999764 56789999
Q ss_pred cCcccccCCc-----------------------------------ee-------------eecccc---c----cCCCcH
Q 048535 260 GLAKMHHHGQ-----------------------------------VM-------------SGRRPI---E----EGKRNL 284 (409)
Q Consensus 260 Gla~~~~~~~-----------------------------------~~-------------~g~~p~---~----~~~~~~ 284 (409)
|||...+... .. .|.+.+ + ....+.
T Consensus 178 gLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtt 257 (418)
T KOG1167|consen 178 GLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTT 257 (418)
T ss_pred hhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCC
Confidence 9997321100 00 011111 0 133456
Q ss_pred HHHHHhhhccCcHHHHhhHHhhhcC---C----------CCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCc-CC
Q 048535 285 VDRMWSLTERSELLSVLDERLKAKG---G----------YADEVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQT-EG 350 (409)
Q Consensus 285 ~~~vws~~~~~~~~~~~~~~l~~~~---~----------~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~-~~ 350 (409)
..|+|+.+. .+..++..+.++-. + +-...+.++..+--+-+-..+..+|++.++..-.+... +.
T Consensus 258 aiDiws~GV--I~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~ 335 (418)
T KOG1167|consen 258 AIDIWSAGV--ILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIES 335 (418)
T ss_pred ccceeeccc--eeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhh
Confidence 678888742 12222222221100 0 11112222222222211223366899988887666552 21
Q ss_pred CCCCC-------------CCcchhHHhhhcccCCCCcccccccCCCCCccccc
Q 048535 351 TGLED-------------EGMNVHLLKRIGTRAMTSSWKFAGSRGHPTFNEIN 390 (409)
Q Consensus 351 ~~~~~-------------~~~~~~~l~~~~~~~~~~~~~~~~~~~hp~~~~~~ 390 (409)
-...+ +....|+|.++++.+|.+|++.++++.||||++.+
T Consensus 336 ~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 336 IYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD 388 (418)
T ss_pred cccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence 11100 11348999999999999999999999999999654
No 399
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.90 E-value=1.5e-23 Score=186.59 Aligned_cols=140 Identities=19% Similarity=0.207 Sum_probs=108.0
Q ss_pred cceeecCCceEEEEEEEC-CcEEEEEEeccCChH--H-------HHH-----------------HHHHHHHhccCCCCce
Q 048535 118 ENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEH--G-------MRE-----------------FLAEVSSLGRLKHRNL 170 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~H~ni 170 (409)
...||+|+||.||+|... |+.||||+++..... . ... ...|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 467999999999999986 999999999754211 1 112 2349999999988776
Q ss_pred eeEeeEEEccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC
Q 048535 171 VGLRGWCKKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK 250 (409)
Q Consensus 171 v~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~ 250 (409)
.....+... ..+|||||++++++..... ....+++.....++.|++.+|.|||+ +.+|+||||||+|||++
T Consensus 82 ~~p~~~~~~---~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H--~~giiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPILLK---SHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQ--DCRLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEEec---CCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHH--hCCcccCCCCHHHEEEE-
Confidence 443332222 2379999999987765532 22468899999999999999999932 78999999999999998
Q ss_pred CCcEEEecccCccccc
Q 048535 251 KMNARLGDFGLAKMHH 266 (409)
Q Consensus 251 ~~~~kl~DFGla~~~~ 266 (409)
++.++|+|||+|....
T Consensus 153 ~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCcEEEEEccccccCC
Confidence 4789999999997543
No 400
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=1.7e-24 Score=207.51 Aligned_cols=214 Identities=17% Similarity=0.200 Sum_probs=166.7
Q ss_pred CCCCccceeecCCceEEEEEEECCcE--EEEEEeccC---ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLLGVE--VALKRISLD---SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~~~~--vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
.+++....||-||||.|=+....++. +|+|.+++. +..+.+....|-.+|...+.|.||++|..|.+ ...+|+.
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd-~kyvYmL 498 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRD-SKYVYML 498 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhcc-chhhhhh
Confidence 45566778999999999999888544 899988765 44556778899999999999999999999987 7789999
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
||-|-||.|...|+ ..+.++......++..+.+|++||| +++||.|||||+|+|||.+|-+||.|||+|+....
T Consensus 499 mEaClGGElWTiLr---dRg~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 499 MEACLGGELWTILR---DRGSFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred HHhhcCchhhhhhh---hcCCcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 99999999999994 4567899999999999999999999 89999999999999999999999999999999877
Q ss_pred Cc---eeeecccccc------CCCcHHHHHHhhhccCcHHHHhhHHhhhc-----------------CCCCHHHHHHHHH
Q 048535 268 GQ---VMSGRRPIEE------GKRNLVDRMWSLTERSELLSVLDERLKAK-----------------GGYADEVVEKVLH 321 (409)
Q Consensus 268 ~~---~~~g~~p~~~------~~~~~~~~vws~~~~~~~~~~~~~~l~~~-----------------~~~~~~~~~~l~~ 321 (409)
+. ..+|.+.+-. ...+...|.|+++ --+++++....++. -.+|........+
T Consensus 573 g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLG--Ili~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~ 650 (732)
T KOG0614|consen 573 GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALG--ILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATD 650 (732)
T ss_pred CCceeeecCCcccccchhhhccCcchhhHHHHHH--HHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHH
Confidence 65 5566665432 3456788999984 12222222222111 1234444455566
Q ss_pred HHHHccCcCCCCCC
Q 048535 322 LGLLCAHPEANSRP 335 (409)
Q Consensus 322 l~~~Cl~~dP~~RP 335 (409)
++.+.+..+|.+|-
T Consensus 651 Lik~LCr~~P~ERL 664 (732)
T KOG0614|consen 651 LIKKLCRDNPTERL 664 (732)
T ss_pred HHHHHHhcCcHhhh
Confidence 66666666676664
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.89 E-value=3.2e-23 Score=201.54 Aligned_cols=173 Identities=25% Similarity=0.341 Sum_probs=139.0
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCCh--------HHHHHHHHHHHHhccCC---CCceeeEeeEEEc
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSE--------HGMREFLAEVSSLGRLK---HRNLVGLRGWCKK 179 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~ 179 (409)
.+|...+.+|.|+||.|++|.++ ...|+||.+.++.. ...-..-.|+.+|..++ |+||++++++|.+
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 35788899999999999999998 67899999975411 11123457999999997 9999999999988
Q ss_pred cCCeEEEEEEeC-CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEec
Q 048535 180 EKESLILIYDYM-ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGD 258 (409)
Q Consensus 180 ~~~~~~lv~E~~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~D 258 (409)
++.+||+||-- ++-+|.++| .-+..+++.++.-|+.||+.|+++|| +.+|||||||-+|+.++.+|-+||+|
T Consensus 641 -dd~yyl~te~hg~gIDLFd~I---E~kp~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 641 -DDYYYLETEVHGEGIDLFDFI---EFKPRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred -CCeeEEEecCCCCCcchhhhh---hccCccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEee
Confidence 78899999965 456899999 44567999999999999999999999 99999999999999999999999999
Q ss_pred ccCcccccCCc--eeeecccccc------CCC-cHHHHHHhhh
Q 048535 259 FGLAKMHHHGQ--VMSGRRPIEE------GKR-NLVDRMWSLT 292 (409)
Q Consensus 259 FGla~~~~~~~--~~~g~~p~~~------~~~-~~~~~vws~~ 292 (409)
||.|.....+. +..|..-+.. ..| ....|+|.++
T Consensus 714 fgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalg 756 (772)
T KOG1152|consen 714 FGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALG 756 (772)
T ss_pred ccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhh
Confidence 99998766543 3333322211 111 3457899874
No 402
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.88 E-value=2.7e-22 Score=178.79 Aligned_cols=139 Identities=19% Similarity=0.214 Sum_probs=110.7
Q ss_pred cceeecCCceEEEEEEEC-CcEEEEEEeccCChH--------------------------HHHHHHHHHHHhccCCCCce
Q 048535 118 ENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEH--------------------------GMREFLAEVSSLGRLKHRNL 170 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~H~ni 170 (409)
...||+|+||.||+|... |+.||||+++..... ....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 468999999999999987 999999999754210 01224578999999999987
Q ss_pred eeEeeEEEccCCeEEEEEEeCCCCCHHHH-HhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCCeee
Q 048535 171 VGLRGWCKKEKESLILIYDYMENGSLDKW-IFECDESIALSWEQRIKVLKDVASGILYLYEGWE-SKVLHRDIKASNVLL 248 (409)
Q Consensus 171 v~l~g~~~~~~~~~~lv~E~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~ivHrDlKp~NILl 248 (409)
.....+... ..++||||++++++... +. ...++......++.|++.+|.+|| . .+|+||||||+|||+
T Consensus 82 ~~p~~~~~~---~~~lVmE~~~g~~~~~~~l~----~~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK---KNVLVMEFIGDDGSPAPRLK----DVPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec---CCEEEEEEecCCCchhhhhh----hccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEE
Confidence 544444332 23799999998865443 42 235788899999999999999999 6 899999999999999
Q ss_pred CCCCcEEEecccCcccccC
Q 048535 249 DKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 249 ~~~~~~kl~DFGla~~~~~ 267 (409)
+ ++.++|+|||+|+....
T Consensus 152 ~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 152 H-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred E-CCCEEEEEcccceecCC
Confidence 8 88999999999987653
No 403
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=2.3e-21 Score=185.54 Aligned_cols=133 Identities=23% Similarity=0.293 Sum_probs=113.2
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCC-----CC---ceeeEeeEEEcc-
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLK-----HR---NLVGLRGWCKKE- 180 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----H~---niv~l~g~~~~~- 180 (409)
..+|.+.++||-|-|++||++.+. .+.||+|+.+.. ....+..+.||++|++++ |+ +||+|++.|...
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 367889999999999999999998 678999998743 445567889999999983 33 599999999743
Q ss_pred --CCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeC
Q 048535 181 --KESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLD 249 (409)
Q Consensus 181 --~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~ 249 (409)
+.++|+|+|++ |-+|..+|... ..+.++...+.+|+.||+.||.|||. ..+|||-||||+|||+.
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s-~YrGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYS-NYRGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLLC 222 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHh-CCCCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeeee
Confidence 45799999999 55999999764 44569999999999999999999998 56999999999999994
No 404
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.87 E-value=3.3e-22 Score=178.62 Aligned_cols=147 Identities=20% Similarity=0.342 Sum_probs=124.4
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
.+.|.+.+.||+|.||.+-+++++ .+.+++|-+... ....++|.+|...--.| .|.||+.-++...+..+....++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 356888999999999999999998 678999998654 23457899999876666 69999998887666567788999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeee-CC-CCcEEEecccCccccc
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLL-DK-KMNARLGDFGLAKMHH 266 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl-~~-~~~~kl~DFGla~~~~ 266 (409)
||+|.|+|.+-+. ...+.+....+++.|++.|+.|+| +.++||||||.+|||| +. ..++||||||+.+..+
T Consensus 102 E~aP~gdL~snv~----~~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 102 EFAPRGDLRSNVE----AAGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred ccCccchhhhhcC----cccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccC
Confidence 9999999998773 345888889999999999999999 9999999999999999 33 3479999999997644
No 405
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.87 E-value=4.6e-21 Score=173.86 Aligned_cols=148 Identities=33% Similarity=0.492 Sum_probs=131.4
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccCChH-HHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEH-GMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
|...+.||+|++|.||++... ++.+|+|.+...... ..+.+.+|++.+.+++|+|++++++++.. ....++++||+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFED-PEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeec-CCceEEEEecc
Confidence 556788999999999999987 689999999876544 67789999999999999999999999886 67889999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
++++|.+++..... .+++..+..++.+++.++.||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 80 EGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRD 151 (225)
T ss_pred CCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence 99999999964321 1899999999999999999999 789999999999999999999999999999876543
No 406
>PRK10345 hypothetical protein; Provisional
Probab=99.87 E-value=9.9e-22 Score=176.79 Aligned_cols=138 Identities=16% Similarity=0.235 Sum_probs=107.3
Q ss_pred CCccceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccC-----CCCceeeEeeEEEccC--Ce-EEE
Q 048535 115 FSEENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRL-----KHRNLVGLRGWCKKEK--ES-LIL 186 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~g~~~~~~--~~-~~l 186 (409)
+...+.||+|+||.||.....+.. +||++........+.+.+|+.+++.+ +||||++++|++.++. +. ..+
T Consensus 4 L~~~~~LG~G~~~~Vy~hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYAHPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred cCCcceecCCCceEEEECCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 345688999999999962222444 69998765444567899999999999 5799999999998743 23 337
Q ss_pred EEEe--CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCceeecCCCCCCeeeCC----CCcEEEecc
Q 048535 187 IYDY--MENGSLDKWIFECDESIALSWEQRIKVLKDVASGI-LYLYEGWESKVLHRDIKASNVLLDK----KMNARLGDF 259 (409)
Q Consensus 187 v~E~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~ivHrDlKp~NILl~~----~~~~kl~DF 259 (409)
|+|| +++|+|.+++.+ ..+++. ..++.|++.++ +||| +.+|+||||||+|||++. +..++|+||
T Consensus 83 I~e~~G~~~~tL~~~l~~----~~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQ----CRYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EecCCCCcchhHHHHHHc----ccccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 8999 668999999943 235555 35678888888 9999 899999999999999974 347999995
Q ss_pred cCc
Q 048535 260 GLA 262 (409)
Q Consensus 260 Gla 262 (409)
+-+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 444
No 407
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=1.2e-21 Score=179.64 Aligned_cols=174 Identities=22% Similarity=0.302 Sum_probs=145.1
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 185 (409)
.++|.....||+|+|+.|.++++. .+.+|+|+++++ ...+..-...|-.+..+. +||.+|.+..+|.. ...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt-esrlf 327 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT-ESRLF 327 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc-cceEE
Confidence 367889999999999999999987 788999999764 344455566777777776 89999999998876 77899
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
.|.||.++|+|--++. ....++++.+..+..+|+-||.||| +.+||.||||..|+|||..|.+||+|+|+.+.-
T Consensus 328 fvieyv~ggdlmfhmq---rqrklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEEecCcceeeehh---hhhcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcC
Confidence 9999999999976663 4456999999999999999999999 899999999999999999999999999999853
Q ss_pred cC----Cceeeeccccc------cCCCcHHHHHHhhh
Q 048535 266 HH----GQVMSGRRPIE------EGKRNLVDRMWSLT 292 (409)
Q Consensus 266 ~~----~~~~~g~~p~~------~~~~~~~~~vws~~ 292 (409)
-. ....+|.+.+- .+.|.+..|.|.+.
T Consensus 402 l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalg 438 (593)
T KOG0695|consen 402 LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALG 438 (593)
T ss_pred CCCCcccccccCCCcccchhhhcccccCceehHHHHH
Confidence 22 22556665542 36788888999884
No 408
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=7.2e-20 Score=165.67 Aligned_cols=134 Identities=20% Similarity=0.337 Sum_probs=113.0
Q ss_pred ceeecCCceEEEEEEECCcEEEEEEeccCCh--------HHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 119 NVIGLGGNGKVYKGQLLGVEVALKRISLDSE--------HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
+.||+|++|.||+|.+.|..|++|....... .....+.+|++++..++|+|+.....++.. ....+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD-PENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe-CCCCEEEEEE
Confidence 5799999999999999999999998654311 112467899999999999998777666655 4567899999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
+++++|.+++... .+ .+..++.+++.+|.+|| +.+++|+|++|.|||++ ++.++|+|||+++.
T Consensus 81 ~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN------GM-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999998431 22 78899999999999999 89999999999999999 78899999999875
No 409
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.82 E-value=1.1e-19 Score=187.05 Aligned_cols=139 Identities=19% Similarity=0.280 Sum_probs=114.3
Q ss_pred HhCCCCccceeecCCceEEEEEEECCcEEEEEEeccC--C------hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCC
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLLGVEVALKRISLD--S------EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKE 182 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~--~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 182 (409)
....|...+.||+|+||+||+|.+.+..+++|+.... . ....+.+.+|++++.+++|+|++....++.. ..
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-~~ 409 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD-PE 409 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe-CC
Confidence 3455667899999999999999998666666553211 1 1123568899999999999999887777765 45
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 183 SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
..++||||+++++|.+++. ....++.|++++|.||| +.+++||||||+|||+ +++.++|+|||++
T Consensus 410 ~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred CCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 6789999999999999883 35679999999999999 8999999999999999 6778999999999
Q ss_pred ccc
Q 048535 263 KMH 265 (409)
Q Consensus 263 ~~~ 265 (409)
+..
T Consensus 475 ~~~ 477 (535)
T PRK09605 475 KYS 477 (535)
T ss_pred ccC
Confidence 864
No 410
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=9.8e-20 Score=164.69 Aligned_cols=163 Identities=13% Similarity=0.118 Sum_probs=125.9
Q ss_pred HhCCCCccceeecCCceEEEEEEECCcEEEEEEeccCCh---HHHHH------HHHHHHHhccCCCCceeeEeeEEEcc-
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLLGVEVALKRISLDSE---HGMRE------FLAEVSSLGRLKHRNLVGLRGWCKKE- 180 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~---~~~~~------~~~E~~~l~~l~H~niv~l~g~~~~~- 180 (409)
..++|+..+.||.|+||.||+....+..+|+|.+..... ..... +.+|+..+.+++|++|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 468899999999999999999777677899999975422 22222 67999999999999999998886532
Q ss_pred ------CCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcE
Q 048535 181 ------KESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNA 254 (409)
Q Consensus 181 ------~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~ 254 (409)
.+..+|+|||++|.+|.++.. ++. ....+++.+|..+| ..+++|||+||+||+++.++ +
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-E
Confidence 235789999999999988741 222 34569999999999 89999999999999999988 9
Q ss_pred EEecccCcccccCCc---eeeeccccccCCCcHHHHHHhhhc
Q 048535 255 RLGDFGLAKMHHHGQ---VMSGRRPIEEGKRNLVDRMWSLTE 293 (409)
Q Consensus 255 kl~DFGla~~~~~~~---~~~g~~p~~~~~~~~~~~vws~~~ 293 (409)
+|+|||..+...... ++.-. ..+....|+|+++-
T Consensus 174 ~liDfg~~~~~~e~~a~d~~vle-----r~y~~~~di~~lg~ 210 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAKDRIDLE-----RHYGIKNEIKDLGY 210 (232)
T ss_pred EEEECCCcccccchhhHHHHHHH-----hHhcccccccceeE
Confidence 999999987654322 11111 12335678898863
No 411
>smart00090 RIO RIO-like kinase.
Probab=99.82 E-value=7.3e-20 Score=168.40 Aligned_cols=141 Identities=17% Similarity=0.204 Sum_probs=110.2
Q ss_pred CCCccceeecCCceEEEEEE-E-C-CcEEEEEEeccCChH------------------------HHHHHHHHHHHhccCC
Q 048535 114 GFSEENVIGLGGNGKVYKGQ-L-L-GVEVALKRISLDSEH------------------------GMREFLAEVSSLGRLK 166 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~-~-~-~~~vAvK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 166 (409)
.|++.+.||+|+||.||+|. . . |+.||+|+++..... ....+..|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47888999999999999998 3 3 899999998753210 1123568999999997
Q ss_pred CCc--eeeEeeEEEccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc-eeecCCCC
Q 048535 167 HRN--LVGLRGWCKKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESK-VLHRDIKA 243 (409)
Q Consensus 167 H~n--iv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivHrDlKp 243 (409)
+.+ +.+++++ ...++||||+++++|..+.. ....+...+...++.|++.+|.||| ..+ |+||||||
T Consensus 109 ~~~i~~p~~~~~-----~~~~lV~E~~~g~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp 177 (237)
T smart00090 109 EAGVPVPKPIAW-----RRNVLVMEFIGGDGLPAPRL---KDVEPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSE 177 (237)
T ss_pred hcCCCCCeeeEe-----cCceEEEEEecCCccccccc---ccCCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCCh
Confidence 533 3444442 13479999999988876542 2234566677899999999999999 888 99999999
Q ss_pred CCeeeCCCCcEEEecccCccccc
Q 048535 244 SNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 244 ~NILl~~~~~~kl~DFGla~~~~ 266 (409)
+||+++ +++++|+|||+|....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccC
Confidence 999999 8899999999997644
No 412
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=3.4e-19 Score=158.01 Aligned_cols=133 Identities=15% Similarity=0.109 Sum_probs=107.7
Q ss_pred CccceeecCCceEEEEEEECCcEEEEEEeccCCh----HHHHHHHHHHHHhccCC-CCceeeEeeEEEccCCeEEEEEEe
Q 048535 116 SEENVIGLGGNGKVYKGQLLGVEVALKRISLDSE----HGMREFLAEVSSLGRLK-HRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 116 ~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~----~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
.....|++|+||+||.+...+.+++.+.+..... -....|.+|+++|++|. |+++.+++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~-----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW-----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE-----cCEEEEEee
Confidence 3467899999999998877889999888865422 11235889999999994 5889999885 235899999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCC-CCCCeeeCCCCcEEEecccCccccc
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDI-KASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl-Kp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
+.|.+|.+.+.. ....++.|++++|.++| +.+|+|||| ||+|||++.++.++|+|||+|....
T Consensus 80 I~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~ 143 (218)
T PRK12274 80 LAGAAMYQRPPR----------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN 143 (218)
T ss_pred ecCccHHhhhhh----------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence 999999765411 11357789999999999 899999999 7999999999999999999997543
No 413
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.81 E-value=1.4e-19 Score=162.34 Aligned_cols=131 Identities=21% Similarity=0.324 Sum_probs=106.3
Q ss_pred eeecCCceEEEEEEECCcEEEEEEeccCC--------hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeC
Q 048535 120 VIGLGGNGKVYKGQLLGVEVALKRISLDS--------EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 120 ~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
.||+|+||.||+|.+.+..|++|...... .....++.+|++++..++|+++.....++.. ....++||||+
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD-PDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE-CCCCEEEEEEE
Confidence 48999999999999889999999865321 1123567899999999988876544444444 44568999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
++++|.+++... .. .++.+++.+|.+|| +.+++|+|++|.||+++ ++.+++.|||+++..
T Consensus 80 ~g~~l~~~~~~~---~~-------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEG---ND-------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhc---HH-------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 999999987431 11 78999999999999 89999999999999999 789999999998763
No 414
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.80 E-value=3.7e-19 Score=159.61 Aligned_cols=143 Identities=21% Similarity=0.247 Sum_probs=111.4
Q ss_pred HHHHHhCCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCCh----------------------HHHHHHHHHHHHhc
Q 048535 107 EIHAATKGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSE----------------------HGMREFLAEVSSLG 163 (409)
Q Consensus 107 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~----------------------~~~~~~~~E~~~l~ 163 (409)
++......|...+.||+|+||.||++... |+.||||+++.... .....+..|..++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 44444444778899999999999999986 99999998764320 01123678899999
Q ss_pred cCCCCc--eeeEeeEEEccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCC
Q 048535 164 RLKHRN--LVGLRGWCKKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDI 241 (409)
Q Consensus 164 ~l~H~n--iv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 241 (409)
++.|++ +.+.++. ...++||||+++++|.+... ......++.+++.++.++| ..+|+||||
T Consensus 89 ~l~~~~i~v~~~~~~-----~~~~lv~e~~~g~~L~~~~~---------~~~~~~~~~~i~~~l~~lh---~~gi~H~Dl 151 (198)
T cd05144 89 ALYEEGFPVPKPIDW-----NRHAVVMEYIDGVELYRVRV---------LEDPEEVLDEILEEIVKAY---KHGIIHGDL 151 (198)
T ss_pred HHHHcCCCCCceeec-----CCceEEEEEeCCcchhhccc---------cccHHHHHHHHHHHHHHHH---HCCCCcCCC
Confidence 998874 4444442 34589999999999977541 0234678899999999999 799999999
Q ss_pred CCCCeeeCCCCcEEEecccCccccc
Q 048535 242 KASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 242 Kp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
||+||++++++.++|+|||++....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCC
Confidence 9999999999999999999996544
No 415
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.79 E-value=4.1e-20 Score=165.33 Aligned_cols=222 Identities=22% Similarity=0.387 Sum_probs=163.0
Q ss_pred cceeecCCceEEEEEEECCcEEEEEEeccC--ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCC
Q 048535 118 ENVIGLGGNGKVYKGQLLGVEVALKRISLD--SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGS 195 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gs 195 (409)
.-+|.+...|+.|+|+|.|..+++|++... +....++|..|.-.|+-+.||||+.++|.|.. ..++.++..|||.||
T Consensus 195 ~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns-ppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS-PPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC-CCCceEeeeeccchH
Confidence 456788889999999999999999988654 34445789999999999999999999999998 678999999999999
Q ss_pred HHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEe--cccCcccccCCcee--
Q 048535 196 LDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLG--DFGLAKMHHHGQVM-- 271 (409)
Q Consensus 196 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~--DFGla~~~~~~~~~-- 271 (409)
|+..|++. ....++-.++++++.++|+|++|||+. ++-|..--|.+..+++|++.+++|+ |--++-.. .+...
T Consensus 274 lynvlhe~-t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe-~gr~y~p 350 (448)
T KOG0195|consen 274 LYNVLHEQ-TSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE-VGRAYSP 350 (448)
T ss_pred HHHHHhcC-ccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeec-cccccCc
Confidence 99999874 445678889999999999999999975 4556666789999999999998874 32211110 01100
Q ss_pred ---e----eccccccCCCcHHHHHHhh-------hccCcH----------HHHhhHHhhhcCCCCHHHHHHHHHHHHHcc
Q 048535 272 ---S----GRRPIEEGKRNLVDRMWSL-------TERSEL----------LSVLDERLKAKGGYADEVVEKVLHLGLLCA 327 (409)
Q Consensus 272 ---~----g~~p~~~~~~~~~~~vws~-------~~~~~~----------~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl 327 (409)
+ .+.|- +..--..|+|++ ..++.. ..+.-+.++ ...++..+..+.+|+.-|.
T Consensus 351 awmspealqrkpe--d~n~raadmwsfaillwel~trevpfadlspmecgmkialeglr--v~ippgis~hm~klm~icm 426 (448)
T KOG0195|consen 351 AWMSPEALQRKPE--DLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLR--VHIPPGISRHMNKLMNICM 426 (448)
T ss_pred ccCCHHHHhcCch--hcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcccc--ccCCCCccHHHHHHHHHHh
Confidence 0 01111 122234455555 222211 011122233 3466777788899999999
Q ss_pred CcCCCCCCCHHHHHHHHhcC
Q 048535 328 HPEANSRPTIRQVLKMLEGQ 347 (409)
Q Consensus 328 ~~dP~~RPt~~evl~~L~~~ 347 (409)
+.||.+||.+..++-.|+++
T Consensus 427 nedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 427 NEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred cCCCCcCCCcceehhhHHHh
Confidence 99999999999999998865
No 416
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.78 E-value=1.8e-19 Score=193.96 Aligned_cols=171 Identities=13% Similarity=0.187 Sum_probs=114.2
Q ss_pred cCCC-CceeeEeeEEEcc------CCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCce
Q 048535 164 RLKH-RNLVGLRGWCKKE------KESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKV 236 (409)
Q Consensus 164 ~l~H-~niv~l~g~~~~~------~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 236 (409)
.++| +||.+++++|... ...++.++||+ +++|.++|.. ....+++.+++.++.||++||.||| +++|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH---~~gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN--PDRSVDAFECFHVFRQIVEIVNAAH---SQGI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc--ccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 4556 6888888887211 23567788988 5599999953 2346999999999999999999999 8999
Q ss_pred eecCCCCCCeeeCC-------------------CCcEEEecccCcccccCC---------c-----------eeee---c
Q 048535 237 LHRDIKASNVLLDK-------------------KMNARLGDFGLAKMHHHG---------Q-----------VMSG---R 274 (409)
Q Consensus 237 vHrDlKp~NILl~~-------------------~~~~kl~DFGla~~~~~~---------~-----------~~~g---~ 274 (409)
+||||||+||||+. ++.+||+|||+++..... . ...| +
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 455677777777642210 0 0001 1
Q ss_pred ccc---ccCCCcHHHHHHhhhccCcHHHHhhHHh------------h--hcCCCCHHHHHHHHHHHHHccCcCCCCCCCH
Q 048535 275 RPI---EEGKRNLVDRMWSLTERSELLSVLDERL------------K--AKGGYADEVVEKVLHLGLLCAHPEANSRPTI 337 (409)
Q Consensus 275 ~p~---~~~~~~~~~~vws~~~~~~~~~~~~~~l------------~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 337 (409)
.+. ....++...|+|+++. .+++++.+.. . ..++...........++.+||+.+|.+||||
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGv--iL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~ 259 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGV--LLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSM 259 (793)
T ss_pred EChhhhccCCCCchhhhhhHHH--HHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcCh
Confidence 111 1245678899999841 2233221110 0 0011111123456788899999999999999
Q ss_pred HHHHH
Q 048535 338 RQVLK 342 (409)
Q Consensus 338 ~evl~ 342 (409)
.|+++
T Consensus 260 ~eil~ 264 (793)
T PLN00181 260 SELLQ 264 (793)
T ss_pred HHHhh
Confidence 99986
No 417
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.77 E-value=7.6e-18 Score=162.56 Aligned_cols=145 Identities=21% Similarity=0.230 Sum_probs=119.9
Q ss_pred CCCccceeecCCceEEEEEEECC---cEEEEEEeccCChHHHHHHHHHHHHhccCCC----CceeeEeeEEEccCCeEEE
Q 048535 114 GFSEENVIGLGGNGKVYKGQLLG---VEVALKRISLDSEHGMREFLAEVSSLGRLKH----RNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~~---~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~g~~~~~~~~~~l 186 (409)
+|.+.+.||+|+||.||++.... ..+|+|............+..|+.++..+.. +++.++++.........++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 79999999999999999999873 4688888765433222267789999888863 5788888877422567889
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC-----CcEEEecccC
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK-----MNARLGDFGL 261 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~-----~~~kl~DFGl 261 (409)
||+.+ |.||.++..... ...++..+.++|+.|++.+|.+|| +.+++||||||.|++++.. ..+.|.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99988 669999775543 567999999999999999999999 8999999999999999865 4589999999
Q ss_pred cc
Q 048535 262 AK 263 (409)
Q Consensus 262 a~ 263 (409)
|+
T Consensus 174 ar 175 (322)
T KOG1164|consen 174 AR 175 (322)
T ss_pred Cc
Confidence 98
No 418
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.75 E-value=1.5e-17 Score=141.07 Aligned_cols=136 Identities=18% Similarity=0.115 Sum_probs=114.8
Q ss_pred ccceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCC--CceeeEeeEEEccCCeEEEEEEeCCCC
Q 048535 117 EENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKH--RNLVGLRGWCKKEKESLILIYDYMENG 194 (409)
Q Consensus 117 ~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~~lv~E~~~~g 194 (409)
+.+.||+|.++.||++...+..+++|....... ...+.+|+.++..++| .++.+++++... .+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~-~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGES-DGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC-CCccEEEEEecCCe
Confidence 357899999999999999888999999865533 4678899999999976 588898887765 56789999999987
Q ss_pred CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc
Q 048535 195 SLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 195 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 265 (409)
++..+ +......++.+++++|.+||.....+++|+|++|+|||++..+.+++.|||+++..
T Consensus 79 ~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 79 TLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 77543 55677788999999999999544468999999999999999899999999998754
No 419
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.74 E-value=2.1e-17 Score=152.39 Aligned_cols=137 Identities=23% Similarity=0.223 Sum_probs=108.6
Q ss_pred cceee-cCCceEEEEEEECCcEEEEEEeccCC-------------hHHHHHHHHHHHHhccCCCCce--eeEeeEEEccC
Q 048535 118 ENVIG-LGGNGKVYKGQLLGVEVALKRISLDS-------------EHGMREFLAEVSSLGRLKHRNL--VGLRGWCKKEK 181 (409)
Q Consensus 118 ~~~lG-~G~fg~Vy~~~~~~~~vAvK~~~~~~-------------~~~~~~~~~E~~~l~~l~H~ni--v~l~g~~~~~~ 181 (409)
...|| .||.|+||.....+..++||.+.... ......+.+|++++.+|+|++| ++.+++.....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 46788 89999999999989999999885321 1223567889999999998875 67777654422
Q ss_pred Ce---EEEEEEeCCC-CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEe
Q 048535 182 ES---LILIYDYMEN-GSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLG 257 (409)
Q Consensus 182 ~~---~~lv~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~ 257 (409)
.. .++||||+++ .+|.+++.. ..++.. .+.+++.+|.+|| +.+|+||||||.|||++.++.++|+
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEE
Confidence 22 3599999997 699998843 235543 3578999999999 8999999999999999998999999
Q ss_pred cccCcccc
Q 048535 258 DFGLAKMH 265 (409)
Q Consensus 258 DFGla~~~ 265 (409)
|||.++..
T Consensus 185 Dfg~~~~~ 192 (239)
T PRK01723 185 DFDRGELR 192 (239)
T ss_pred ECCCcccC
Confidence 99998763
No 420
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.74 E-value=5e-17 Score=143.42 Aligned_cols=147 Identities=27% Similarity=0.360 Sum_probs=118.0
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCC-ceeeEeeEEEccCCeEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHR-NLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~~lv~ 188 (409)
...|...+.||+|+||.+|.|... |..||||.-+.... ..++..|..+.+.|+|- .|..+.-|..+ ...-.+||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e-~~ynvlVM 90 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTE-KDYNVLVM 90 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccc-cccceeee
Confidence 367999999999999999999876 99999999764422 24567888888888753 44444444444 66778999
Q ss_pred EeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC---CcEEEecccCcccc
Q 048535 189 DYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK---MNARLGDFGLAKMH 265 (409)
Q Consensus 189 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~---~~~kl~DFGla~~~ 265 (409)
+.+ |.||.+++.-+. ..++..+.+-++-|++.-++|+| .+++|||||||+|.|..-+ ..+.++|||||+.+
T Consensus 91 dLL-GPsLEdLfnfC~--R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCS--RRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred ecc-CccHHHHHHHHh--hhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 988 779999875443 35888999999999999999999 8999999999999999644 35889999999875
Q ss_pred cC
Q 048535 266 HH 267 (409)
Q Consensus 266 ~~ 267 (409)
..
T Consensus 165 ~d 166 (341)
T KOG1163|consen 165 RD 166 (341)
T ss_pred cc
Confidence 43
No 421
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.73 E-value=2.3e-17 Score=146.30 Aligned_cols=135 Identities=19% Similarity=0.238 Sum_probs=97.9
Q ss_pred cceeecCCceEEEEEEEC-CcEEEEEEeccCCh--HHHHHH----------------------HHHHHHhccCCCCc--e
Q 048535 118 ENVIGLGGNGKVYKGQLL-GVEVALKRISLDSE--HGMREF----------------------LAEVSSLGRLKHRN--L 170 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~--~~~~~~----------------------~~E~~~l~~l~H~n--i 170 (409)
.+.||+|+||.||+|... ++.||||+++.... .....+ ..|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 467999999999999988 99999999875421 111111 35666666664433 3
Q ss_pred eeEeeEEEccCCeEEEEEEeCCCCCHHH-HHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CceeecCCCCCCeee
Q 048535 171 VGLRGWCKKEKESLILIYDYMENGSLDK-WIFECDESIALSWEQRIKVLKDVASGILYLYEGWE-SKVLHRDIKASNVLL 248 (409)
Q Consensus 171 v~l~g~~~~~~~~~~lv~E~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~ivHrDlKp~NILl 248 (409)
.+.++. ...++||||++++++.. .+... ... .....++.+++.++.++| . .+|+|+||||+||++
T Consensus 82 ~~~~~~-----~~~~lv~e~~~g~~~~~~~l~~~----~~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL-----NRHVLVMEFIGGDGIPAPRLKDV----RLL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNILV 148 (187)
T ss_pred CceEec-----CCCEEEEEEeCCCCccChhhhhh----hhc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEE
Confidence 444432 23589999999965432 12110 011 567889999999999999 6 999999999999999
Q ss_pred CCCCcEEEecccCccccc
Q 048535 249 DKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 249 ~~~~~~kl~DFGla~~~~ 266 (409)
+ ++.++|+|||.+....
T Consensus 149 ~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 149 D-DGKVYIIDVPQAVEID 165 (187)
T ss_pred E-CCcEEEEECccccccc
Confidence 9 8899999999997654
No 422
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.71 E-value=5.2e-17 Score=149.38 Aligned_cols=147 Identities=24% Similarity=0.298 Sum_probs=118.5
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCeEEEEEE
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
-.|.+.++||+|+||..+.|+.. ++.||||.-...+. ..++..|.+..+.| ..++|...+-|-.+ +-.-.||+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqe-G~~NiLVid 104 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQE-GKYNILVID 104 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccc-cchhhhhhh
Confidence 46899999999999999999875 99999998754432 24566788888777 46778776643333 555679999
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC-----cEEEecccCccc
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM-----NARLGDFGLAKM 264 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~-----~~kl~DFGla~~ 264 (409)
.+ |.||.+++.-+. ..++..++..+|.|++.-++|+| ++.+|.|||||+|.||..-+ .+.|.|||+|+.
T Consensus 105 LL-GPSLEDLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLCG--RRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hh-CcCHHHHHHHhc--CcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 88 679988775433 45899999999999999999999 89999999999999997543 489999999998
Q ss_pred ccCC
Q 048535 265 HHHG 268 (409)
Q Consensus 265 ~~~~ 268 (409)
+...
T Consensus 179 YrDp 182 (449)
T KOG1165|consen 179 YRDP 182 (449)
T ss_pred hcCc
Confidence 7554
No 423
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.70 E-value=4.9e-18 Score=174.93 Aligned_cols=169 Identities=20% Similarity=0.229 Sum_probs=125.2
Q ss_pred CccceeecCCceEEEEEEEC--CcEEEEEEec-----cCChHH-HHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEE
Q 048535 116 SEENVIGLGGNGKVYKGQLL--GVEVALKRIS-----LDSEHG-MREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 116 ~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~-----~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv 187 (409)
.....+|.|++|.|+..... .+..+.|..+ ...... ...+..|+.+-..+.|||++..+..+.+ ....+-.
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~-~~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQE-IDGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhh-cccchhh
Confidence 35678999999987776654 3434444332 222222 2237778888899999999888777665 3334445
Q ss_pred EEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 188 YDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 188 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
||||++ +|..++.. ...++..++-.++.|+..|+.||| ..+|.|||||++|++++.++.+||+|||.+.....
T Consensus 400 mE~~~~-Dlf~~~~~---~~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMS---NGKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred hhcccH-HHHHHHhc---ccccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeecc
Confidence 999999 99999943 346888999999999999999999 89999999999999999999999999999976543
Q ss_pred Cc--------eeeecccccc-------CCCcHHHHHHhhh
Q 048535 268 GQ--------VMSGRRPIEE-------GKRNLVDRMWSLT 292 (409)
Q Consensus 268 ~~--------~~~g~~p~~~-------~~~~~~~~vws~~ 292 (409)
+. -+.|..|+.. .......|+|+..
T Consensus 473 ~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ 512 (601)
T KOG0590|consen 473 PWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCG 512 (601)
T ss_pred CcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhcc
Confidence 21 3456666322 2234667899873
No 424
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.69 E-value=5.3e-16 Score=146.92 Aligned_cols=224 Identities=25% Similarity=0.339 Sum_probs=161.7
Q ss_pred CCccceeecCCceEEEEEEECCcEEEEEEeccCCh---HHHHHHHHHHHHhccCCCC-ceeeEeeEEEccCCeEEEEEEe
Q 048535 115 FSEENVIGLGGNGKVYKGQLLGVEVALKRISLDSE---HGMREFLAEVSSLGRLKHR-NLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~~lv~E~ 190 (409)
|...+.||.|+||.||++... ..+++|.+..... .....|.+|+.++..+.|+ |++++.+.+.. ....+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD-EGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec-CCEEEEEEec
Confidence 566788999999999999998 8899999976522 2467899999999999888 79999999865 5567999999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC-cEEEecccCcccccCCc
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM-NARLGDFGLAKMHHHGQ 269 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~-~~kl~DFGla~~~~~~~ 269 (409)
+.++++.+++........+.......++.|++.++.|+| ..+++|||+||+||+++... .++++|||+++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977743211126889999999999999999999 88899999999999999988 79999999998544321
Q ss_pred ----------eeeeccccc------c---CCCcHHHHHHhhhcc-------------Cc----HHHHhhHHhhhcCC---
Q 048535 270 ----------VMSGRRPIE------E---GKRNLVDRMWSLTER-------------SE----LLSVLDERLKAKGG--- 310 (409)
Q Consensus 270 ----------~~~g~~p~~------~---~~~~~~~~vws~~~~-------------~~----~~~~~~~~l~~~~~--- 310 (409)
...|...+. . .......|+|+++.. .. .....+........
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA 236 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccc
Confidence 122222221 1 245677889966300 00 01111111100000
Q ss_pred --CCHH----HHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 048535 311 --YADE----VVEKVLHLGLLCAHPEANSRPTIRQVLKM 343 (409)
Q Consensus 311 --~~~~----~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 343 (409)
.... ....+.+++..|+..+|..|.++.+....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 237 SPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0111 11467788888999999999988877653
No 425
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.62 E-value=1.6e-15 Score=150.07 Aligned_cols=184 Identities=24% Similarity=0.343 Sum_probs=131.3
Q ss_pred hccCCCCceeeEeeEEEccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCC
Q 048535 162 LGRLKHRNLVGLRGWCKKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDI 241 (409)
Q Consensus 162 l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 241 (409)
|+.+.|.|+.+++|.+.+ ++..++|.+||..|+|.+.+.. ....++|.-...+.++|+.||.|||+ +.--.|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~-~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVD-GPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHN--SPIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEec-CCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhc--Ccceeeeee
Confidence 467899999999999998 5889999999999999999964 45679999999999999999999995 333399999
Q ss_pred CCCCeeeCCCCcEEEecccCcccccC------------------Cceeeeccc--------cccCCCcHHHHHHhhhcc-
Q 048535 242 KASNVLLDKKMNARLGDFGLAKMHHH------------------GQVMSGRRP--------IEEGKRNLVDRMWSLTER- 294 (409)
Q Consensus 242 Kp~NILl~~~~~~kl~DFGla~~~~~------------------~~~~~g~~p--------~~~~~~~~~~~vws~~~~- 294 (409)
+++|+++|..+.+||+|||+...... .+++.+... ...+.|++..-+.++..+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 99999999999999999999887632 112222111 112334444333333111
Q ss_pred ---------CcHHHHhhHHhh-----hcCCCC-H-HHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhcCcCC
Q 048535 295 ---------SELLSVLDERLK-----AKGGYA-D-EVVEKVLHLGLLCAHPEANSRPTIRQVLKMLEGQTEG 350 (409)
Q Consensus 295 ---------~~~~~~~~~~l~-----~~~~~~-~-~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~ 350 (409)
....+++..... ..+... . +..+.+..++..||..+|.+||+++++-..++.....
T Consensus 156 ~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 156 GPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred CccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 111122222111 001111 1 3444789999999999999999999999988876554
No 426
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.62 E-value=1.6e-15 Score=160.11 Aligned_cols=146 Identities=23% Similarity=0.239 Sum_probs=109.3
Q ss_pred HHHhCCCCccceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCC---CCceeeEeeEEEccCCeE
Q 048535 109 HAATKGFSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLK---HRNLVGLRGWCKKEKESL 184 (409)
Q Consensus 109 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~ 184 (409)
..-...|.+.++||+|+||.||+|... |+.||+|+-+....- +|.--.+++.+|+ -+.|..+...+.. .+.-
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~-~~~S 769 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVF-QNAS 769 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHcc-CCcc
Confidence 334456788899999999999999987 999999997654321 1212222333343 1223333333332 3455
Q ss_pred EEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC-------CCcEEEe
Q 048535 185 ILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK-------KMNARLG 257 (409)
Q Consensus 185 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~-------~~~~kl~ 257 (409)
+||+||.+.|+|.+++. ....++|...+.++.|++.-++.|| ..+|||+||||+|.||.. +..++|+
T Consensus 770 ~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred eeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEE
Confidence 79999999999999994 5667999999999999999999999 899999999999999932 3458999
Q ss_pred cccCccc
Q 048535 258 DFGLAKM 264 (409)
Q Consensus 258 DFGla~~ 264 (409)
|||.|-.
T Consensus 844 DfG~siD 850 (974)
T KOG1166|consen 844 DFGRSID 850 (974)
T ss_pred eccccee
Confidence 9999853
No 427
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.61 E-value=3.1e-15 Score=149.52 Aligned_cols=142 Identities=17% Similarity=0.206 Sum_probs=101.6
Q ss_pred cceeecCCceEEEEEEEC-CcEEEEEEeccCChHHH----------------------------------------HHHH
Q 048535 118 ENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGM----------------------------------------REFL 156 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~----------------------------------------~~~~ 156 (409)
.+.||.|++|.||+|++. |+.||||+.+....... -+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 367999999999999997 99999999875421110 0255
Q ss_pred HHHHHhccCC----CCceeeEeeEEEccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHH-HHHHHHhc
Q 048535 157 AEVSSLGRLK----HRNLVGLRGWCKKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVAS-GILYLYEG 231 (409)
Q Consensus 157 ~E~~~l~~l~----H~niv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~-gL~yLH~~ 231 (409)
+|+..+.+++ |.+-+.+-..+.+.....+|||||++|++|.++...... .. .+..++.++++ .+..+|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~-- 274 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVL-- 274 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHH--
Confidence 5666666552 333334333343323456899999999999887643111 12 23456666666 467888
Q ss_pred CCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 232 WESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 232 ~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
..+++|+|+||.||+++.+++++++|||++.....
T Consensus 275 -~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 275 -RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred -hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 79999999999999999999999999999977653
No 428
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.60 E-value=7.5e-15 Score=128.65 Aligned_cols=137 Identities=18% Similarity=0.098 Sum_probs=96.2
Q ss_pred CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCceeee
Q 048535 194 GSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVMSG 273 (409)
Q Consensus 194 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~g 273 (409)
|||.+++... ...+++.++..++.|++.||.||| +.+ ||+|||++.++.+|+ ||+++....... .|
T Consensus 1 GsL~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~-~g 66 (176)
T smart00750 1 VSLADILEVR--GRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQS-RV 66 (176)
T ss_pred CcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeeccccC-CC
Confidence 7999999642 346999999999999999999999 454 999999999999999 999987654321 22
Q ss_pred cccc------ccCCCcHHHHHHhhhccCcHHHHhhHHh----------------hhcC-------CCCHHHHH--HHHHH
Q 048535 274 RRPI------EEGKRNLVDRMWSLTERSELLSVLDERL----------------KAKG-------GYADEVVE--KVLHL 322 (409)
Q Consensus 274 ~~p~------~~~~~~~~~~vws~~~~~~~~~~~~~~l----------------~~~~-------~~~~~~~~--~l~~l 322 (409)
...+ ....++...|+|+++ ..+++++.... .... ........ .+.++
T Consensus 67 ~~~y~aPE~~~~~~~~~~~DiwSlG--~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (176)
T smart00750 67 DPYFMAPEVIQGQSYTEKADIYSLG--ITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADF 144 (176)
T ss_pred cccccChHHhcCCCCcchhhHHHHH--HHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHH
Confidence 2222 124567789999984 11222221111 0000 01122223 58999
Q ss_pred HHHccCcCCCCCCCHHHHHHHHhc
Q 048535 323 GLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 323 ~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
+.+||+.||.+|||+.|+++.+..
T Consensus 145 i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 145 MRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred HHHHHhcccccccCHHHHHHHHHH
Confidence 999999999999999999988754
No 429
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.60 E-value=3.5e-15 Score=140.33 Aligned_cols=172 Identities=18% Similarity=0.247 Sum_probs=114.3
Q ss_pred CCCceeeEeeEEEc--------------------------cCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHH
Q 048535 166 KHRNLVGLRGWCKK--------------------------EKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLK 219 (409)
Q Consensus 166 ~H~niv~l~g~~~~--------------------------~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 219 (409)
+|||||+++++|.+ .+..+|+||.-++. +|++|+-. ...+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~----~~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT----RHRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhc----CCCchHHHHHHHH
Confidence 59999999998764 12368999998876 99999943 3456667777999
Q ss_pred HHHHHHHHHHhcCCCceeecCCCCCCeee--CCCCc--EEEecccCcccccCC---------c-------------eeee
Q 048535 220 DVASGILYLYEGWESKVLHRDIKASNVLL--DKKMN--ARLGDFGLAKMHHHG---------Q-------------VMSG 273 (409)
Q Consensus 220 ~ia~gL~yLH~~~~~~ivHrDlKp~NILl--~~~~~--~kl~DFGla~~~~~~---------~-------------~~~g 273 (409)
|+++|+.||| .++|.|||+|++|||+ |+|.. ..|+|||++---+.. + +.+.
T Consensus 349 QlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999999 8999999999999999 45543 689999987432210 0 1111
Q ss_pred ccccccCCCcHHHHHHhhhc--------cCcHHH----HhhHH---hhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 048535 274 RRPIEEGKRNLVDRMWSLTE--------RSELLS----VLDER---LKAKGGYADEVVEKVLHLGLLCAHPEANSRPTIR 338 (409)
Q Consensus 274 ~~p~~~~~~~~~~~vws~~~--------~~~~~~----~~~~~---l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 338 (409)
.+.........+.|.|.... ...++. .++.+ -...+..++.++..+.+++...++.||++||+..
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 11111111224567776521 111111 11110 0111334556677889999999999999999988
Q ss_pred HHHHHHh
Q 048535 339 QVLKMLE 345 (409)
Q Consensus 339 evl~~L~ 345 (409)
-..+.|+
T Consensus 506 iAANvl~ 512 (598)
T KOG4158|consen 506 IAANVLN 512 (598)
T ss_pred HHHhHHH
Confidence 7766664
No 430
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.50 E-value=4.3e-13 Score=125.19 Aligned_cols=213 Identities=19% Similarity=0.211 Sum_probs=127.4
Q ss_pred CCccceeecCCceEEEEEEEC--CcEEEEEEeccC---ChHHHHHHHHHHHHhccCCC----------CceeeEeeEEE-
Q 048535 115 FSEENVIGLGGNGKVYKGQLL--GVEVALKRISLD---SEHGMREFLAEVSSLGRLKH----------RNLVGLRGWCK- 178 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H----------~niv~l~g~~~- 178 (409)
+...+.||.|+++.||.+++. ++++|||.+... .....+++.+|.-....+.+ -.++--++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 345688999999999999998 799999998543 33456778888766665432 11221111111
Q ss_pred --------ccC--C-----eEEEEEEeCCCCCHHHHHhc---CC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeec
Q 048535 179 --------KEK--E-----SLILIYDYMENGSLDKWIFE---CD-ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHR 239 (409)
Q Consensus 179 --------~~~--~-----~~~lv~E~~~~gsL~~~l~~---~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHr 239 (409)
... . +.+++|+-+. +||.+++.. .. ....+....++.+..|+++.+++|| ..+++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEec
Confidence 100 1 3467788774 488887532 11 1223555667788899999999999 8999999
Q ss_pred CCCCCCeeeCCCCcEEEecccCcccccCCcee----eecccc-----------ccCCCcHHHHHHhhhccCcHHHHhhHH
Q 048535 240 DIKASNVLLDKKMNARLGDFGLAKMHHHGQVM----SGRRPI-----------EEGKRNLVDRMWSLTERSELLSVLDER 304 (409)
Q Consensus 240 DlKp~NILl~~~~~~kl~DFGla~~~~~~~~~----~g~~p~-----------~~~~~~~~~~vws~~~~~~~~~~~~~~ 304 (409)
||||+|++++.+|.++|+||+........... .+..|. ..-.++...|.|.++ -.++.+....
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG--~~ly~lWC~~ 247 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLG--ITLYSLWCGR 247 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHH--HHHHHHHHSS
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHH--HHHHHHHHcc
Confidence 99999999999999999999876554332111 011111 112357778888873 1122221111
Q ss_pred hhh------------cCCCCHHHHHHHHHHHHHccCcCCCCC
Q 048535 305 LKA------------KGGYADEVVEKVLHLGLLCAHPEANSR 334 (409)
Q Consensus 305 l~~------------~~~~~~~~~~~l~~l~~~Cl~~dP~~R 334 (409)
++. -..+. +.++.+..|+...++.||.+|
T Consensus 248 lPf~~~~~~~~~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 248 LPFGLSSPEADPEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp -STCCCGGGSTSGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCCccccccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 110 02334 788889999999999999988
No 431
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.48 E-value=1.2e-13 Score=120.15 Aligned_cols=128 Identities=20% Similarity=0.135 Sum_probs=96.9
Q ss_pred cceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCCCcee-eEeeEEEccCCeEEEEEEeCCCCCH
Q 048535 118 ENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLV-GLRGWCKKEKESLILIYDYMENGSL 196 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~~lv~E~~~~gsL 196 (409)
.+.|+.|.++.||+++..+..|++|....... ....+..|+.++..+.+.+++ +++.+.. ...++||||+++.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~---~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP---ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEECCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC---CCCeEEEEecCCCcc
Confidence 35689999999999999899999999865432 123467899999988665554 4554332 234799999999887
Q ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc-----eeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 197 DKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESK-----VLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 197 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-----ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
.+.- . ....++.+++++|+.|| ..+ ++|+|++|.||+++ ++.+++.|||.+..
T Consensus 79 ~~~~--------~---~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTED--------F---SDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc--------c---cCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 5420 1 11245678999999999 555 59999999999999 66899999999865
No 432
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.46 E-value=4.3e-13 Score=136.02 Aligned_cols=145 Identities=12% Similarity=0.130 Sum_probs=96.0
Q ss_pred CCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHH----------------------------------H----
Q 048535 113 KGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHG----------------------------------M---- 152 (409)
Q Consensus 113 ~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~----------------------------------~---- 152 (409)
..|+. +.||+|++|+||+|+++ |+.||||+.+..-... .
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45766 78999999999999986 8999999997541110 0
Q ss_pred --HHHHHHHHHhccCC----CCceeeEeeEEEccCCeEEEEEEeCCCCCHHHHHhcCCCC---CCCCHHHHHHHHHHHHH
Q 048535 153 --REFLAEVSSLGRLK----HRNLVGLRGWCKKEKESLILIYDYMENGSLDKWIFECDES---IALSWEQRIKVLKDVAS 223 (409)
Q Consensus 153 --~~~~~E~~~l~~l~----H~niv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~---~~l~~~~~~~i~~~ia~ 223 (409)
-+|.+|+..+.+++ +.+.+.+-.++.+-....+|||||++|+++.++-.-...+ ..+.......++.|
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q--- 275 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ--- 275 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence 12455665555552 4444444444433344568999999999998752111111 01222222222233
Q ss_pred HHHHHHhcCCCceeecCCCCCCeeeCCCC----cEEEecccCcccccCC
Q 048535 224 GILYLYEGWESKVLHRDIKASNVLLDKKM----NARLGDFGLAKMHHHG 268 (409)
Q Consensus 224 gL~yLH~~~~~~ivHrDlKp~NILl~~~~----~~kl~DFGla~~~~~~ 268 (409)
+. ..+++|+|+||.||+++.++ ++++.|||++...+..
T Consensus 276 ----if---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 276 ----VF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred ----HH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 33 57999999999999999988 9999999999876543
No 433
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.45 E-value=4.9e-14 Score=146.94 Aligned_cols=223 Identities=15% Similarity=0.139 Sum_probs=150.7
Q ss_pred CCCccceeecCCceEEEEEEECCcEEEEEEeccCC-hHHHHHHHHHHHH--hccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 114 GFSEENVIGLGGNGKVYKGQLLGVEVALKRISLDS-EHGMREFLAEVSS--LGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 114 ~f~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~--l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
++...+.||++.|=.|.+|+++...|+||++-... .-..+.|.++++- ...++|||++++.-+-.. ....|||=+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t-~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVT-DKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHh-hHHHHHHHHH
Confidence 57778899999999999999994459999985443 3334444444433 445589999998776544 4456788888
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccc--cCC
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMH--HHG 268 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~--~~~ 268 (409)
..+ +|++.| ..+..+...+..-|+.|++.||..+| ..+|+|+|||.+||||+.-.-+.|+||.--|.. ..+
T Consensus 103 vkh-nLyDRl---STRPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 103 VKH-NLYDRL---STRPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred Hhh-hhhhhh---ccchHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 866 999988 33455777888889999999999999 899999999999999999888999999876532 111
Q ss_pred c----------------eee--------eccccccC-C-CcHHHHHHhhhccCcHHHHhhH---------Hh--hhcCCC
Q 048535 269 Q----------------VMS--------GRRPIEEG-K-RNLVDRMWSLTERSELLSVLDE---------RL--KAKGGY 311 (409)
Q Consensus 269 ~----------------~~~--------g~~p~~~~-~-~~~~~~vws~~~~~~~~~~~~~---------~l--~~~~~~ 311 (409)
. ++. |......+ . -....|+++++ +.+.+++.+ -+ +.....
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~G--CViaELf~Eg~PlF~LSQL~aYr~~~~~ 253 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAG--CVIAELFLEGRPLFTLSQLLAYRSGNAD 253 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhh--HHHHHHHhcCCCcccHHHHHhHhccCcc
Confidence 0 000 11111111 1 23455666653 222222211 00 000122
Q ss_pred CHHH-H-----HHHHHHHHHccCcCCCCCCCHHHHHHHHhc
Q 048535 312 ADEV-V-----EKVLHLGLLCAHPEANSRPTIRQVLKMLEG 346 (409)
Q Consensus 312 ~~~~-~-----~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 346 (409)
..+. + ..+++++..|++.||++|-++++.++.-.+
T Consensus 254 ~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 254 DPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred CHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 2221 1 247889999999999999999999987444
No 434
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.45 E-value=2.1e-14 Score=142.66 Aligned_cols=211 Identities=21% Similarity=0.173 Sum_probs=156.5
Q ss_pred eeecCCceEEEEEE-----ECCcEEEEEEeccCCh--HHHHHHHHHHHHhccCC-CCceeeEeeEEEccCCeEEEEEEeC
Q 048535 120 VIGLGGNGKVYKGQ-----LLGVEVALKRISLDSE--HGMREFLAEVSSLGRLK-HRNLVGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 120 ~lG~G~fg~Vy~~~-----~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~lv~E~~ 191 (409)
.+|+|.||.|+++. ..|..+|.|.++.... ........|..++..++ ||.+|++.-.+.. +...+++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt-~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQT-DGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecc-ccchhHhhhhc
Confidence 37999999998743 2377789988865421 11124556788888886 9999999877766 78899999999
Q ss_pred CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCCcee
Q 048535 192 ENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHGQVM 271 (409)
Q Consensus 192 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 271 (409)
.+|+|...+. ....+++.....+...++-|++++| +.+|+|||+|++||+++.+|.+|+.|||+++..-..+..
T Consensus 80 rgg~lft~l~---~~~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~ 153 (612)
T KOG0603|consen 80 RGGDLFTRLS---KEVMFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA 153 (612)
T ss_pred ccchhhhccc---cCCchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence 9999998884 3445777778888899999999999 899999999999999999999999999999987666655
Q ss_pred eecccccc----CCCcHHHHHHhhhcc---------CcHHHHhhHHhhhcCCCCHHHHHHHHHHHHHccCcCCCCCCCH
Q 048535 272 SGRRPIEE----GKRNLVDRMWSLTER---------SELLSVLDERLKAKGGYADEVVEKVLHLGLLCAHPEANSRPTI 337 (409)
Q Consensus 272 ~g~~p~~~----~~~~~~~~vws~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 337 (409)
+|..-+.. .......|.|++..- .--.+.+...++.....+.+......++.......+|.+|--.
T Consensus 154 cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 154 CGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGGDTMKRILKAELEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred ccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCchHHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 65544332 224455677875211 0001344444444456677777777888888888888888644
No 435
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.34 E-value=1e-11 Score=110.13 Aligned_cols=135 Identities=16% Similarity=0.141 Sum_probs=98.1
Q ss_pred ceeecCCceEEEEEEEC--------CcEEEEEEeccCC------------h----------HHHHHHH----HHHHHhcc
Q 048535 119 NVIGLGGNGKVYKGQLL--------GVEVALKRISLDS------------E----------HGMREFL----AEVSSLGR 164 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--------~~~vAvK~~~~~~------------~----------~~~~~~~----~E~~~l~~ 164 (409)
..||.|--+.||.|... +..+|||+.+... . ...+.+. +|++.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 56899999999999765 3689999986320 0 0122233 79999999
Q ss_pred CCC--CceeeEeeEEEccCCeEEEEEEeCCCCCHHH-HHhcCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCceeecC
Q 048535 165 LKH--RNLVGLRGWCKKEKESLILIYDYMENGSLDK-WIFECDESIALSWEQRIKVLKDVASGILYL-YEGWESKVLHRD 240 (409)
Q Consensus 165 l~H--~niv~l~g~~~~~~~~~~lv~E~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrD 240 (409)
+.. -++.+.+++ ..-+|||||+.++.+.. .+. ...++..+...+..+++.+|..| | ..+|+|+|
T Consensus 83 l~~~Gv~vP~pi~~-----~~~~lvME~Ig~~~~~~~~Lk----d~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL-----KKHVLVMSFIGDDQVPAPKLK----DAKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe-----cCCEEEEEEcCCCCccchhhh----ccccCHHHHHHHHHHHHHHHHHHHH---hCCeecCC
Confidence 843 456666653 23478999998754422 231 12355566778889999999999 7 78999999
Q ss_pred CCCCCeeeCCCCcEEEecccCccccc
Q 048535 241 IKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 241 lKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
|++.|||++ ++.+.|+|||.|-..+
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCceeCC
Confidence 999999997 4679999999886544
No 436
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.34 E-value=1.8e-13 Score=133.61 Aligned_cols=150 Identities=21% Similarity=0.306 Sum_probs=101.8
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 183 SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
.+||.|++|...+|.+||...+.....++.....++.|++.|++| ++.+|||+||.||....+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 378999999999999999766666678899999999999999998 68899999999999999999999999998
Q ss_pred ccccCCc----------eeeeccc------cccCCCcHHHHHHhhhccCcHHHHhh-----------HHhhhcCCCCHHH
Q 048535 263 KMHHHGQ----------VMSGRRP------IEEGKRNLVDRMWSLTERSELLSVLD-----------ERLKAKGGYADEV 315 (409)
Q Consensus 263 ~~~~~~~----------~~~g~~p------~~~~~~~~~~~vws~~~~~~~~~~~~-----------~~l~~~~~~~~~~ 315 (409)
....... --.|..- +....|+...|+++++- .+.+++. -.-...+.+++..
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGl--il~EL~~~f~T~~er~~t~~d~r~g~ip~~~ 481 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGL--ILAELLIQFSTQFERIATLTDIRDGIIPPEF 481 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHH--HHHHHHHHhccHHHHHHhhhhhhcCCCChHH
Confidence 6554432 0111111 11245666667666521 0111100 0000112333222
Q ss_pred ---HHHHHHHHHHccCcCCCCCCCHHHH
Q 048535 316 ---VEKVLHLGLLCAHPEANSRPTIRQV 340 (409)
Q Consensus 316 ---~~~l~~l~~~Cl~~dP~~RPt~~ev 340 (409)
.++=..+.++.+.+.|.+||++.++
T Consensus 482 ~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 482 LQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 1234578889999999999955443
No 437
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.29 E-value=3.3e-11 Score=103.74 Aligned_cols=133 Identities=19% Similarity=0.285 Sum_probs=98.8
Q ss_pred ceeecCCceEEEEEEECCcEEEEEEeccC---Ch-----HHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEe
Q 048535 119 NVIGLGGNGKVYKGQLLGVEVALKRISLD---SE-----HGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDY 190 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~---~~-----~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~ 190 (409)
..+++|+-+.+|.+.+.|.++.+|.-... .+ -....-.+|+.++.+++--.|.-..=+..+ .....|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD-~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD-PDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc-CCCCEEEEEE
Confidence 35789999999999988878777764322 11 123457789999998854433222223333 4566799999
Q ss_pred CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 191 MENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 191 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
+++-.|.+++... ...++..+-.-+.-|| ..+|+|+||.++||++..+. +.++||||+....
T Consensus 81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~ 142 (204)
T COG3642 81 IEGELLKDALEEA----------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSD 142 (204)
T ss_pred eCChhHHHHHHhc----------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccccc
Confidence 9999999998432 2456777777788899 89999999999999997765 9999999998643
No 438
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.28 E-value=6.6e-11 Score=101.45 Aligned_cols=144 Identities=17% Similarity=0.229 Sum_probs=105.0
Q ss_pred ccceeecCCceEEEEEEECCcEEEEEEeccC--------ChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEE
Q 048535 117 EENVIGLGGNGKVYKGQLLGVEVALKRISLD--------SEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIY 188 (409)
Q Consensus 117 ~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~--------~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 188 (409)
....|-+|+-+.|+++.+.|+...||.-... ..-..++..+|+++|.+++--.|.-..=++.+ ...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D-~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFID-TYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEe-cCCCeEEE
Confidence 4678999999999999999999888864322 12234667899999998854343222223333 33446899
Q ss_pred EeCCC-CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC---cEEEecccCccc
Q 048535 189 DYMEN-GSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM---NARLGDFGLAKM 264 (409)
Q Consensus 189 E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~---~~kl~DFGla~~ 264 (409)
||+++ .++.+++....... ........++.+|-+.+.-|| .+.|+|+||..+||+|..++ .+.+.|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99977 47888887643332 222333678889999999999 89999999999999997665 368999999865
Q ss_pred c
Q 048535 265 H 265 (409)
Q Consensus 265 ~ 265 (409)
.
T Consensus 166 s 166 (229)
T KOG3087|consen 166 S 166 (229)
T ss_pred c
Confidence 4
No 439
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.27 E-value=3.9e-11 Score=108.89 Aligned_cols=143 Identities=17% Similarity=0.185 Sum_probs=110.5
Q ss_pred ceeecCCceEEEEEEEC-CcEEEEEEeccCCh-HHHHHHHHHHHHhccCCC--CceeeEeeEEEccC--CeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLL-GVEVALKRISLDSE-HGMREFLAEVSSLGRLKH--RNLVGLRGWCKKEK--ESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~--~~~~lv~E~~~ 192 (409)
+.|+.|.++.||+++.. |..+++|....... .....+..|+++++.+.+ .++.+++.+..... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999887 48999999865422 134578899999999965 34566777665421 25689999999
Q ss_pred CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 048535 193 NGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGW---------------------------------------- 232 (409)
Q Consensus 193 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------------- 232 (409)
+.++.+.+.. ..++..+...++.+++++|.+||+..
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9888775521 35778888889999999999998521
Q ss_pred -------------CCceeecCCCCCCeeeCC--CCcEEEecccCcccc
Q 048535 233 -------------ESKVLHRDIKASNVLLDK--KMNARLGDFGLAKMH 265 (409)
Q Consensus 233 -------------~~~ivHrDlKp~NILl~~--~~~~kl~DFGla~~~ 265 (409)
...++|+|+.|.|||++. ++.+.|.||+.+...
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 245799999999999998 566899999988653
No 440
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.13 E-value=1.9e-09 Score=100.81 Aligned_cols=142 Identities=15% Similarity=0.105 Sum_probs=102.9
Q ss_pred ceeecCCceEEEEEEECCcEEEEEEeccCChH-HHH----------HHHHHHHHhccCCCCc--eeeEeeEEEcc----C
Q 048535 119 NVIGLGGNGKVYKGQLLGVEVALKRISLDSEH-GMR----------EFLAEVSSLGRLKHRN--LVGLRGWCKKE----K 181 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~-~~~----------~~~~E~~~l~~l~H~n--iv~l~g~~~~~----~ 181 (409)
+.+-......|++..+.|+.+.||........ ..+ .+.+|...+.++..-+ +.+.+++.... .
T Consensus 28 e~v~~~~~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 28 EVFRELEGRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred cEEecCCCceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 44444444567788888999999987543211 111 3778999888884333 34455554321 2
Q ss_pred CeEEEEEEeCCCC-CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC-------CCc
Q 048535 182 ESLILIYDYMENG-SLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK-------KMN 253 (409)
Q Consensus 182 ~~~~lv~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~-------~~~ 253 (409)
...+||||++++- +|.+++.... ....+...+..++.+++..+.-|| ..+|+|+|++++|||++. +..
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCce
Confidence 2478999999986 8999985321 234566778899999999999999 899999999999999975 467
Q ss_pred EEEecccCccc
Q 048535 254 ARLGDFGLAKM 264 (409)
Q Consensus 254 ~kl~DFGla~~ 264 (409)
+.|+||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998864
No 441
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.10 E-value=1.6e-10 Score=120.92 Aligned_cols=180 Identities=17% Similarity=0.212 Sum_probs=110.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E 189 (409)
..+|..++.|-.|+||.||..+++ .+++|.| ++.++- +++- ++.....| +.|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-----ilRn--ilt~a~np----------------fvv-- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-----ILRN--ILTFAGNP----------------FVV-- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-----hhhc--cccccCCc----------------cee--
Confidence 468999999999999999999887 7788884 432211 1110 12222222 223
Q ss_pred eCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC-
Q 048535 190 YMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG- 268 (409)
Q Consensus 190 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~- 268 (409)
||-...+. ..+.++-. ++.+++||| ..+|+|||+||+|.||+.-|.+|++|||+++..-..
T Consensus 136 ----gDc~tllk---~~g~lPvd--------mvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~ 197 (1205)
T KOG0606|consen 136 ----GDCATLLK---NIGPLPVD--------MVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL 197 (1205)
T ss_pred ----chhhhhcc---cCCCCcch--------hhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhc
Confidence 44444442 22334432 378999999 899999999999999999999999999998753211
Q ss_pred ------------------ceeeecccccc------CCCcHHHHHHhhhc-------------cCcHHHHhhHHhhhcCCC
Q 048535 269 ------------------QVMSGRRPIEE------GKRNLVDRMWSLTE-------------RSELLSVLDERLKAKGGY 311 (409)
Q Consensus 269 ------------------~~~~g~~p~~~------~~~~~~~~vws~~~-------------~~~~~~~~~~~l~~~~~~ 311 (409)
+-++|.+-+.. ..|....|.|.+.. .....+++..-+.....+
T Consensus 198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~w 277 (1205)
T KOG0606|consen 198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW 277 (1205)
T ss_pred cchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccc
Confidence 12333333221 34555667787731 111122222222111111
Q ss_pred ---CHHHHHHHHHHHHHccCcCCCCCC
Q 048535 312 ---ADEVVEKVLHLGLLCAHPEANSRP 335 (409)
Q Consensus 312 ---~~~~~~~l~~l~~~Cl~~dP~~RP 335 (409)
++....+..+++.+.++.+|..|-
T Consensus 278 pE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 278 PEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred cccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 233455778888888888998884
No 442
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.06 E-value=1.2e-11 Score=127.79 Aligned_cols=152 Identities=29% Similarity=0.322 Sum_probs=121.2
Q ss_pred hCCCCccceeecCCceEEEEEEEC---CcEEEEEEeccCC--hHHHHHHHHHHHHhccCC-CCceeeEeeEEEccCCeEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL---GVEVALKRISLDS--EHGMREFLAEVSSLGRLK-HRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~---~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~ 185 (409)
...|...+.||+|+|+.|-..... ...+|+|.+.... .........|..+-..+. |+|++++++...+ .+..+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~-~~~~~ 97 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS-PRSYL 97 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC-Ccccc
Confidence 355677788999999999887664 4567787776442 233344556888888886 9999999998876 77889
Q ss_pred EEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCC-cEEEecccCccc
Q 048535 186 LIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKM-NARLGDFGLAKM 264 (409)
Q Consensus 186 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~-~~kl~DFGla~~ 264 (409)
+.+||..+|++.+.+... .....+....-.+..|+..++.|+|. ..++.|||+||+|.+++..+ ..|++|||+|..
T Consensus 98 ~~~~~s~g~~~f~~i~~~-~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHP-DSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred cccCcccccccccccccC-CccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 999999999999887321 11245666778899999999999995 57899999999999999999 999999999987
Q ss_pred ccC
Q 048535 265 HHH 267 (409)
Q Consensus 265 ~~~ 267 (409)
+..
T Consensus 175 ~~~ 177 (601)
T KOG0590|consen 175 YRN 177 (601)
T ss_pred ccc
Confidence 655
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.03 E-value=2.1e-10 Score=114.22 Aligned_cols=222 Identities=19% Similarity=0.218 Sum_probs=153.8
Q ss_pred CCCCccceeec--CCceEEEEEEE--C--CcEEEEEEec--cCChHHHHHHHHHHHHhccC-CCCceeeEeeEEEccCCe
Q 048535 113 KGFSEENVIGL--GGNGKVYKGQL--L--GVEVALKRIS--LDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCKKEKES 183 (409)
Q Consensus 113 ~~f~~~~~lG~--G~fg~Vy~~~~--~--~~~vAvK~~~--~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 183 (409)
+.|...+.+|. |.+|.||.+.. . +..+|+|+-+ ...+.....=.+|+...+++ .|+|.++.+..+.. .+.
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~-~~~ 192 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG-SGI 192 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc-CCc
Confidence 45667788999 99999999887 4 7889999843 33334444455788888888 59999998877766 778
Q ss_pred EEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCceeecCCCCCCeeeCCC-CcEEEec
Q 048535 184 LILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVAS----GILYLYEGWESKVLHRDIKASNVLLDKK-MNARLGD 258 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivHrDlKp~NILl~~~-~~~kl~D 258 (409)
.++-+|+|. .+|.++.+.. ...++......+..+..+ ||.++| ...++|-|+||.||+...+ ...+++|
T Consensus 193 lfiqtE~~~-~sl~~~~~~~--~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 193 LFIQTELCG-ESLQSYCHTP--CNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred ceeeecccc-chhHHhhhcc--cccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCC
Confidence 899999986 6999888643 223666777777888888 999999 8999999999999999999 8899999
Q ss_pred ccCcccccCCceeee----cc----------ccccCCCcHHHHHHhhhcc-------------C--cHHHHhhHHhhhcC
Q 048535 259 FGLAKMHHHGQVMSG----RR----------PIEEGKRNLVDRMWSLTER-------------S--ELLSVLDERLKAKG 309 (409)
Q Consensus 259 FGla~~~~~~~~~~g----~~----------p~~~~~~~~~~~vws~~~~-------------~--~~~~~~~~~l~~~~ 309 (409)
||+...+..+.+..- +. ....+.+...+|+.++... + .-+.-++.... ..
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i-p~ 345 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI-PL 345 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC-ch
Confidence 999887765541110 11 1112455666777665311 0 00011111110 01
Q ss_pred CCCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 048535 310 GYADEVVEKVLHLGLLCAHPEANSRPTIRQVLK 342 (409)
Q Consensus 310 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 342 (409)
++......++.....++++.+|-.|++.+.+.+
T Consensus 346 e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 346 EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred hhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 112222335555888899999999999888764
No 444
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.01 E-value=2.6e-09 Score=94.30 Aligned_cols=125 Identities=22% Similarity=0.270 Sum_probs=81.3
Q ss_pred EEEEEEEC-CcEEEEEEeccCC-------------h-------------HHHHHHHHHHHHhccCCCC--ceeeEeeEEE
Q 048535 128 KVYKGQLL-GVEVALKRISLDS-------------E-------------HGMREFLAEVSSLGRLKHR--NLVGLRGWCK 178 (409)
Q Consensus 128 ~Vy~~~~~-~~~vAvK~~~~~~-------------~-------------~~~~~~~~E~~~l~~l~H~--niv~l~g~~~ 178 (409)
.||.|... |..+|||..+... . .......+|.+.|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999986 8899999986420 0 0123467899999999755 456666542
Q ss_pred ccCCeEEEEEEeCC--CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHH-HHhcCCCceeecCCCCCCeeeCCCCcEE
Q 048535 179 KEKESLILIYDYME--NGSLDKWIFECDESIALSWEQRIKVLKDVASGILY-LYEGWESKVLHRDIKASNVLLDKKMNAR 255 (409)
Q Consensus 179 ~~~~~~~lv~E~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~y-LH~~~~~~ivHrDlKp~NILl~~~~~~k 255 (409)
. -+|||||++ +..+..+. .. .++......++.+++..+.. +| ..+|+|+||.+.|||++++ .+.
T Consensus 80 --~--~~ivME~I~~~G~~~~~l~-~~----~~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 --R--NVIVMEYIGEDGVPLPRLK-DV----DLSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp --T--TEEEEE--EETTEEGGCHH-HC----GGGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEE
T ss_pred --C--CEEEEEecCCCccchhhHH-hc----cccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEE
Confidence 2 269999998 54554433 11 12234456677788886666 46 8999999999999999888 899
Q ss_pred EecccCccccc
Q 048535 256 LGDFGLAKMHH 266 (409)
Q Consensus 256 l~DFGla~~~~ 266 (409)
|+|||.|....
T Consensus 147 iIDf~qav~~~ 157 (188)
T PF01163_consen 147 IIDFGQAVDSS 157 (188)
T ss_dssp E--GTTEEETT
T ss_pred EEecCcceecC
Confidence 99999886543
No 445
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.93 E-value=1.1e-09 Score=101.58 Aligned_cols=97 Identities=23% Similarity=0.410 Sum_probs=80.9
Q ss_pred HhccCCCCceeeEeeEEEcc----CCeEEEEEEeCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc
Q 048535 161 SLGRLKHRNLVGLRGWCKKE----KESLILIYDYMENGSLDKWIFECD-ESIALSWEQRIKVLKDVASGILYLYEGWESK 235 (409)
Q Consensus 161 ~l~~l~H~niv~l~g~~~~~----~~~~~lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 235 (409)
-|-++.|.|||+++.|+.+. ..+..+++|||..|+|.++|++.. ....+......+|+.||..||.|||.. +++
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCc
Confidence 34556799999999988652 345788999999999999997642 234578888899999999999999964 899
Q ss_pred eeecCCCCCCeeeCCCCcEEEec
Q 048535 236 VLHRDIKASNVLLDKKMNARLGD 258 (409)
Q Consensus 236 ivHrDlKp~NILl~~~~~~kl~D 258 (409)
|+|+++..+-|++..++-+||+-
T Consensus 199 iihgnlTc~tifiq~ngLIkig~ 221 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGS 221 (458)
T ss_pred cccCCcchhheeecCCceEEecc
Confidence 99999999999999998888753
No 446
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.91 E-value=2.3e-08 Score=100.92 Aligned_cols=120 Identities=17% Similarity=0.238 Sum_probs=97.7
Q ss_pred CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHH
Q 048535 136 GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRI 215 (409)
Q Consensus 136 ~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~ 215 (409)
+.+|.|...+...........+-++.|+.++||||++++..+.. .+..|||+|-+. .|..++.+ +......
T Consensus 37 ~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~-~~~~ylvTErV~--Pl~~~lk~------l~~~~v~ 107 (690)
T KOG1243|consen 37 GGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEE-EGTLYLVTERVR--PLETVLKE------LGKEEVC 107 (690)
T ss_pred CCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcc-cCceEEEeeccc--cHHHHHHH------hHHHHHH
Confidence 78888888876655444556778889999999999999998876 678999999763 46666643 2344555
Q ss_pred HHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 216 KVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 216 ~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
--+.||+.||.|||+ +.+++|++|.-..|+++..|..||++|-++....
T Consensus 108 ~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~ 156 (690)
T KOG1243|consen 108 LGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKAS 156 (690)
T ss_pred HHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccc
Confidence 577899999999997 7899999999999999999999999998875443
No 447
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.87 E-value=1.2e-09 Score=108.72 Aligned_cols=148 Identities=21% Similarity=0.188 Sum_probs=116.5
Q ss_pred HHhCCCCccceeecCCceEEEEEEEC---CcEEEEEEeccCChHHH--HHHHHHHHHhccC-CCCceeeEeeEEEccCCe
Q 048535 110 AATKGFSEENVIGLGGNGKVYKGQLL---GVEVALKRISLDSEHGM--REFLAEVSSLGRL-KHRNLVGLRGWCKKEKES 183 (409)
Q Consensus 110 ~~~~~f~~~~~lG~G~fg~Vy~~~~~---~~~vAvK~~~~~~~~~~--~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 183 (409)
..+.+|.....||.|.|+.|+..... +..+++|.+........ ..-+.|+.+...+ .|.++++.+..+.. ...
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-~r~ 340 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-LRQ 340 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc-ccc
Confidence 34567888999999999999988755 77899999875522221 2224566666666 58888887665655 456
Q ss_pred EEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCC-CcEEEecccCc
Q 048535 184 LILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKK-MNARLGDFGLA 262 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~-~~~kl~DFGla 262 (409)
.|+--|||.++++...+ .-...+.+..++++..|++.++.++| ++.++|+|+||+||++..+ +..+++|||++
T Consensus 341 ~~ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred ccCchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhccccccc
Confidence 77999999999987765 23346788889999999999999999 8999999999999999886 78899999998
Q ss_pred cc
Q 048535 263 KM 264 (409)
Q Consensus 263 ~~ 264 (409)
..
T Consensus 415 t~ 416 (524)
T KOG0601|consen 415 TR 416 (524)
T ss_pred cc
Confidence 64
No 448
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.85 E-value=3.8e-08 Score=96.61 Aligned_cols=141 Identities=20% Similarity=0.280 Sum_probs=110.9
Q ss_pred CceEEEEEEEC--CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCceeeEeeEEEc---cCCeEEEEEEeCCC-CCHHH
Q 048535 125 GNGKVYKGQLL--GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLVGLRGWCKK---EKESLILIYDYMEN-GSLDK 198 (409)
Q Consensus 125 ~fg~Vy~~~~~--~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~---~~~~~~lv~E~~~~-gsL~~ 198 (409)
.-.+.|++... |..|++|++..+..+.......=++.++++.|+|||++..++.. .+..+++||+|.|+ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 34678999876 99999999954433333334456788999999999999988762 24568999999997 57877
Q ss_pred HHhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 199 WIFECD------------ESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 199 ~l~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
+-.... .+...++..++.++.|+..||.++| +.|..-+-|.+.+||++.+.+++|+.-|......
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 654321 2234788999999999999999999 7899999999999999999999998888877655
Q ss_pred CC
Q 048535 267 HG 268 (409)
Q Consensus 267 ~~ 268 (409)
.+
T Consensus 445 ~d 446 (655)
T KOG3741|consen 445 ED 446 (655)
T ss_pred CC
Confidence 44
No 449
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.78 E-value=4.8e-08 Score=88.06 Aligned_cols=107 Identities=21% Similarity=0.256 Sum_probs=83.0
Q ss_pred HHHHHHHHHhccCCCCc--eeeEeeEEEccC---CeEEEEEEeCCCC-CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 048535 153 REFLAEVSSLGRLKHRN--LVGLRGWCKKEK---ESLILIYDYMENG-SLDKWIFECDESIALSWEQRIKVLKDVASGIL 226 (409)
Q Consensus 153 ~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~---~~~~lv~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ 226 (409)
....+|...+..|..-. +.+.+++..... ...++|+|++++. +|.+++.... ..+......++.+++..+.
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~---~~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE---QLDPSQRRELLRALARLIA 132 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc---ccchhhHHHHHHHHHHHHH
Confidence 45778888887774333 455666554421 2458999999984 7999985421 2666778899999999999
Q ss_pred HHHhcCCCceeecCCCCCCeeeCCCC---cEEEecccCcccc
Q 048535 227 YLYEGWESKVLHRDIKASNVLLDKKM---NARLGDFGLAKMH 265 (409)
Q Consensus 227 yLH~~~~~~ivHrDlKp~NILl~~~~---~~kl~DFGla~~~ 265 (409)
-|| ..+|+|+|+++.|||++.+. .+.++||+-++..
T Consensus 133 ~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 133 KLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999 89999999999999998887 7999999988753
No 450
>PRK09902 hypothetical protein; Provisional
Probab=98.74 E-value=2.2e-07 Score=82.85 Aligned_cols=140 Identities=17% Similarity=0.150 Sum_probs=105.9
Q ss_pred eeecCCceEEEEEEECCcEEEEEEeccC---C---hHHHHHHHHHHHHhccCCCC--ceeeEeeEEEcc----CCeEEEE
Q 048535 120 VIGLGGNGKVYKGQLLGVEVALKRISLD---S---EHGMREFLAEVSSLGRLKHR--NLVGLRGWCKKE----KESLILI 187 (409)
Q Consensus 120 ~lG~G~fg~Vy~~~~~~~~vAvK~~~~~---~---~~~~~~~~~E~~~l~~l~H~--niv~l~g~~~~~----~~~~~lv 187 (409)
--|+||.+-|++-.+.|..+=+|+-... + +.....|.+|...|.+|..- .+.+.. ++... .-..+||
T Consensus 25 N~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 25 NYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CcCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 3577999999998888888889987522 1 33567899999999998533 244444 33211 1246899
Q ss_pred EEeCCC-CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCc--EEEecccCccc
Q 048535 188 YDYMEN-GSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMN--ARLGDFGLAKM 264 (409)
Q Consensus 188 ~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~--~kl~DFGla~~ 264 (409)
+|-+++ -||.+++.+. ...+.+...+..++.++++.+.-|| +.++.|+|+.+.|||++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~-~~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQH-AVSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcC-CcCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 997764 5899988542 2234677888899999999999999 899999999999999986666 99999987654
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.73 E-value=6e-08 Score=88.62 Aligned_cols=132 Identities=21% Similarity=0.267 Sum_probs=94.0
Q ss_pred CCccceeecCCceEEEEEEEC-CcEEEEEEeccCCh----------------------HHHHHHHHHHHHhccCCCC--c
Q 048535 115 FSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSE----------------------HGMREFLAEVSSLGRLKHR--N 169 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~----------------------~~~~~~~~E~~~l~~l~H~--n 169 (409)
..+.+.||-|--+.||.|... |.++|||.=+.... -.+....+|.++|.+|... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 445689999999999999998 99999997543210 1123457899999999654 6
Q ss_pred eeeEeeEEEccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeC
Q 048535 170 LVGLRGWCKKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLD 249 (409)
Q Consensus 170 iv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~ 249 (409)
|.+.+++ +...+||||+++-.|...= ++....-.++..|++-+.-.- ..+|||+|+.+=||+++
T Consensus 173 VP~P~~~-----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~ 236 (304)
T COG0478 173 VPKPIAW-----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVT 236 (304)
T ss_pred CCCcccc-----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEe
Confidence 7777763 3457999999996665421 112222233344444443333 58899999999999999
Q ss_pred CCCcEEEecccCc
Q 048535 250 KKMNARLGDFGLA 262 (409)
Q Consensus 250 ~~~~~kl~DFGla 262 (409)
+||.+.++||=-+
T Consensus 237 ~dg~~~vIDwPQ~ 249 (304)
T COG0478 237 EDGDIVVIDWPQA 249 (304)
T ss_pred cCCCEEEEeCccc
Confidence 9999999999654
No 452
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.60 E-value=3.6e-07 Score=92.57 Aligned_cols=141 Identities=14% Similarity=0.174 Sum_probs=93.7
Q ss_pred ceeecCCceEEEEEEEC-CcEEEEEEeccCChHH------------------------------HH----------HHHH
Q 048535 119 NVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHG------------------------------MR----------EFLA 157 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~------------------------------~~----------~~~~ 157 (409)
+-|+.++-|+||+|+++ |+.||||+.+.+-... .+ ++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 67999999999999999 9999999987541110 01 2445
Q ss_pred HHHHhccCC-----CCceeeEeeEEEccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHH-HHHHHhc
Q 048535 158 EVSSLGRLK-----HRNLVGLRGWCKKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASG-ILYLYEG 231 (409)
Q Consensus 158 E~~~l~~l~-----H~niv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~g-L~yLH~~ 231 (409)
|...+.+++ .+++ ++=..+.+-.+.-.|+|||++|-.+.+...-.. ...+... ++..++++ +..+-
T Consensus 211 EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~k~---ia~~~~~~f~~q~~-- 282 (517)
T COG0661 211 EAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGIDRKE---LAELLVRAFLRQLL-- 282 (517)
T ss_pred HHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCCHHH---HHHHHHHHHHHHHH--
Confidence 666666552 3333 332333332345679999999988888742211 2344332 33333332 12222
Q ss_pred CCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 232 WESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 232 ~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
..++.|.|..|.||+++.+++..+-|||+....+..
T Consensus 283 -~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 283 -RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred -hcCccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 468999999999999999999999999998776554
No 453
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.52 E-value=1.7e-06 Score=79.12 Aligned_cols=139 Identities=18% Similarity=0.162 Sum_probs=83.6
Q ss_pred ceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCCCc--eeeEeeEEEccCCeEEEEEEeCCCCC-
Q 048535 119 NVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKHRN--LVGLRGWCKKEKESLILIYDYMENGS- 195 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~~lv~E~~~~gs- 195 (409)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..-. +.+.+++... .+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~-~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH--KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVED-GGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe--cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEec-CCeeeeeeeecCCccc
Confidence 56899999999984 35567888876533 2244678999998885433 3556666655 556788999999863
Q ss_pred HHHH---------------------HhcCCCCCCCCHHHHH-HHHH----------HHHH-HHHHHHhc-CCCceeecCC
Q 048535 196 LDKW---------------------IFECDESIALSWEQRI-KVLK----------DVAS-GILYLYEG-WESKVLHRDI 241 (409)
Q Consensus 196 L~~~---------------------l~~~~~~~~l~~~~~~-~i~~----------~ia~-gL~yLH~~-~~~~ivHrDl 241 (409)
+... ||..... ..+..... ++.. ++.+ ...+|... ....++|+|+
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~-~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~ 160 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCD-TSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF 160 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCC-CCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence 2211 1111000 11111100 0000 0011 11222211 1345789999
Q ss_pred CCCCeeeCCCCcEEEecccCccc
Q 048535 242 KASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 242 Kp~NILl~~~~~~kl~DFGla~~ 264 (409)
.|.||++++++ +.|.||+.+..
T Consensus 161 ~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 161 QIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCCcEEEcCCC-cEEEechhcCc
Confidence 99999999888 99999998864
No 454
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.45 E-value=4.2e-06 Score=76.13 Aligned_cols=145 Identities=15% Similarity=0.135 Sum_probs=86.8
Q ss_pred cceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCCC--ceeeEeeEEEcc--CCeEEEEEEeCCC
Q 048535 118 ENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKHR--NLVGLRGWCKKE--KESLILIYDYMEN 193 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~g~~~~~--~~~~~lv~E~~~~ 193 (409)
.+.|+.|..+.||+....+..+++|..... .....+..|..++..+... .+.+++.++... ....+++|+++++
T Consensus 2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEEESSSSEEEEEEETTSEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CccCCCCCeeeEEEEEECCcEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 367899999999999998789999997644 4456778899988888433 345666644321 3357899999999
Q ss_pred CCHHH----------------HH---hcCC-CCCCCCHHH---------HHHH------------HHHHHH-HHHHHHh-
Q 048535 194 GSLDK----------------WI---FECD-ESIALSWEQ---------RIKV------------LKDVAS-GILYLYE- 230 (409)
Q Consensus 194 gsL~~----------------~l---~~~~-~~~~l~~~~---------~~~i------------~~~ia~-gL~yLH~- 230 (409)
..+.. .+ +... ......+.. .... ...+.+ .+..++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL 159 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence 88777 11 1110 111111110 0000 111222 2333332
Q ss_pred ---cCCCceeecCCCCCCeeeC-CCCcEEEecccCccc
Q 048535 231 ---GWESKVLHRDIKASNVLLD-KKMNARLGDFGLAKM 264 (409)
Q Consensus 231 ---~~~~~ivHrDlKp~NILl~-~~~~~kl~DFGla~~ 264 (409)
.....++|+|+.|.|||++ +++.+-|.||+.+..
T Consensus 160 ~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 160 LPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred hccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 1257799999999999999 666668999998864
No 455
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.43 E-value=7.9e-07 Score=78.78 Aligned_cols=105 Identities=20% Similarity=0.202 Sum_probs=82.9
Q ss_pred HHHHHhccCCC-CceeeEeeEEEccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc
Q 048535 157 AEVSSLGRLKH-RNLVGLRGWCKKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESK 235 (409)
Q Consensus 157 ~E~~~l~~l~H-~niv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 235 (409)
.|.-+|+.+++ +++.+++|+|-. +++.||.+.+++...-.....-..-+|..+.+||.++++.+.+|++.....
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG~-----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCGR-----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECCC-----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 58888888866 699999999953 579999998766421000011124689999999999999999999766567
Q ss_pred eeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 236 VLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 236 ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
+.-.|++++|+-+++++++|+.|...+-...
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence 8889999999999999999999998775543
No 456
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.41 E-value=5.7e-06 Score=74.19 Aligned_cols=139 Identities=16% Similarity=0.170 Sum_probs=94.3
Q ss_pred HhCCCCccceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHH---------HHHHHHhccCCC---CceeeEeeEEE
Q 048535 111 ATKGFSEENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREF---------LAEVSSLGRLKH---RNLVGLRGWCK 178 (409)
Q Consensus 111 ~~~~f~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~---------~~E~~~l~~l~H---~niv~l~g~~~ 178 (409)
..++|...+.+-......|.+-...|..+.+|..+.......+.| .+++..+.+++. -..+.++.+..
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 457788888888888888888888899999999876533222222 233443333322 22222222221
Q ss_pred cc----CCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcE
Q 048535 179 KE----KESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNA 254 (409)
Q Consensus 179 ~~----~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~ 254 (409)
.. ....+++|||++|-.|.++. .++. .++..+++++.-|| ..|+.|+|..|.|+++++++ +
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~-------~i~e----~~~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~~~-i 173 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIE-------DIDE----DLAEKIVEAIKQLH---KHGFYHGDPHPGNFLVSNNG-I 173 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccch-------hcCH----HHHHHHHHHHHHHH---HcCCccCCCCcCcEEEECCc-E
Confidence 10 23456899999998886653 1222 24566778899999 89999999999999998655 9
Q ss_pred EEecccCccc
Q 048535 255 RLGDFGLAKM 264 (409)
Q Consensus 255 kl~DFGla~~ 264 (409)
++.||+..+.
T Consensus 174 ~iID~~~k~~ 183 (229)
T PF06176_consen 174 RIIDTQGKRM 183 (229)
T ss_pred EEEECccccc
Confidence 9999987764
No 457
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.39 E-value=4.5e-06 Score=75.71 Aligned_cols=153 Identities=17% Similarity=0.197 Sum_probs=103.3
Q ss_pred cccHHHHHHHhCCCCccceee---cCCceEEEEEEEC-CcEEEEEEeccCChHH-------------------HH-----
Q 048535 102 RVSYQEIHAATKGFSEENVIG---LGGNGKVYKGQLL-GVEVALKRISLDSEHG-------------------MR----- 153 (409)
Q Consensus 102 ~~~~~~l~~~~~~f~~~~~lG---~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~-------------------~~----- 153 (409)
..++..+.....+..+....| +|--+.||+|... +..+|||+.+...... .+
T Consensus 34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~ 113 (268)
T COG1718 34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA 113 (268)
T ss_pred hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence 456667777766666665555 5666789999876 8999999997542111 01
Q ss_pred HHHHHHHHhccCC--CCceeeEeeEEEccCCeEEEEEEeCCCCC-HHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 048535 154 EFLAEVSSLGRLK--HRNLVGLRGWCKKEKESLILIYDYMENGS-LDKWIFECDESIALSWEQRIKVLKDVASGILYLYE 230 (409)
Q Consensus 154 ~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~lv~E~~~~gs-L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~ 230 (409)
-..+|..-|.++. +-.+.+-+++.. -.|||||+.... -.-.|. ...+...+...+..++++.+.-|-.
T Consensus 114 W~~kEf~NL~R~~eAGVrvP~Pi~~~~-----nVLvMEfIg~~g~pAP~Lk----Dv~~e~~e~~~~~~~~v~~~~~l~~ 184 (268)
T COG1718 114 WARKEFRNLKRAYEAGVRVPEPIAFRN-----NVLVMEFIGDDGLPAPRLK----DVPLELEEAEGLYEDVVEYMRRLYK 184 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCceeecC-----CeEEEEeccCCCCCCCCcc----cCCcCchhHHHHHHHHHHHHHHHHH
Confidence 1245777787773 344455555332 268999997641 111121 1223444677788888888888873
Q ss_pred cCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 231 GWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 231 ~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
..++||+||..=|||+. ++.+.|+|||-|-...
T Consensus 185 --~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 185 --EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred --hcCcccccchhhheEEE-CCeEEEEECccccccC
Confidence 48999999999999999 8899999999886544
No 458
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.34 E-value=3e-06 Score=72.82 Aligned_cols=130 Identities=22% Similarity=0.273 Sum_probs=90.6
Q ss_pred CccceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCCCcee-eEeeEEEccCCeEEEEEEeCCCC
Q 048535 116 SEENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLV-GLRGWCKKEKESLILIYDYMENG 194 (409)
Q Consensus 116 ~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~~lv~E~~~~g 194 (409)
...+.||+|.+|.||+|.+.|..+|+|+-+.+++ +..+..|+++|..+.-.++. +++.|-. -++.|||+.|-
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~yg~-----~~i~me~i~G~ 97 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWRGGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFYGE-----DFIRMEYIDGR 97 (201)
T ss_pred hhhhhhhcccccEEEEeeccCceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEech-----hhhhhhhhcCc
Confidence 4457899999999999999999999999876544 46788999999999877764 3444332 23569999998
Q ss_pred CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCC--CCeeeCCCCcEEEecccCccccc
Q 048535 195 SLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKA--SNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 195 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp--~NILl~~~~~~kl~DFGla~~~~ 266 (409)
.|.+.-.. .+-..+. .+++. +|.=+ ..+|-|..|.- .||++++ ..+.|+||.-|+...
T Consensus 98 ~L~~~~~~------~~rk~l~----~vlE~-a~~LD--~~GI~H~El~~~~k~vlv~~-~~~~iIDFd~At~k~ 157 (201)
T COG2112 98 PLGKLEIG------GDRKHLL----RVLEK-AYKLD--RLGIEHGELSRPWKNVLVND-RDVYIIDFDSATFKK 157 (201)
T ss_pred chhhhhhc------ccHHHHH----HHHHH-HHHHH--HhccchhhhcCCceeEEecC-CcEEEEEccchhhcc
Confidence 88876521 1222333 33444 23222 56787877753 4555554 489999999987543
No 459
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.30 E-value=9e-06 Score=75.14 Aligned_cols=140 Identities=14% Similarity=0.079 Sum_probs=84.5
Q ss_pred eecCCc-eEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCC-CCceeeEeeEEEccCCeEEEEEEeCCCCCHHH
Q 048535 121 IGLGGN-GKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLK-HRNLVGLRGWCKKEKESLILIYDYMENGSLDK 198 (409)
Q Consensus 121 lG~G~f-g~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~lv~E~~~~gsL~~ 198 (409)
|-.|.+ ..||+....+..+.||...... ...+.+|++++..+. +--+.+++++... .+..++|||+++|.+|.+
T Consensus 6 ~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~-~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 6 VTEGQSGATVYRLDGKNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSD-DGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred cCCCCCcCeEEEEcCCCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEec-CCccEEEEEeeCCccHhH
Confidence 444544 7899988777788888876443 235668898888883 4335567776655 456789999999977764
Q ss_pred HH-------------------hcCCC-CCCCC--HHHHHHHHH--------------------HHHHHHHHHHh----cC
Q 048535 199 WI-------------------FECDE-SIALS--WEQRIKVLK--------------------DVASGILYLYE----GW 232 (409)
Q Consensus 199 ~l-------------------~~~~~-~~~l~--~~~~~~i~~--------------------~ia~gL~yLH~----~~ 232 (409)
.. +.... ..+.. ......... .+...+..|-. ..
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 161 (244)
T cd05150 82 LWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEE 161 (244)
T ss_pred hhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcC
Confidence 32 11110 00111 000000000 01111122211 01
Q ss_pred CCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 233 ESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 233 ~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
...++|+|+.|.|||++.+....|.||+.|..
T Consensus 162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred ceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 35699999999999999987788999998864
No 460
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.28 E-value=9.2e-06 Score=71.99 Aligned_cols=126 Identities=23% Similarity=0.336 Sum_probs=92.8
Q ss_pred CCCCccceeecCCc-eEEEEEEECCcEEEEEEecc---CCh------------------HHHHHHHHHHHHhccCC---C
Q 048535 113 KGFSEENVIGLGGN-GKVYKGQLLGVEVALKRISL---DSE------------------HGMREFLAEVSSLGRLK---H 167 (409)
Q Consensus 113 ~~f~~~~~lG~G~f-g~Vy~~~~~~~~vAvK~~~~---~~~------------------~~~~~~~~E~~~l~~l~---H 167 (409)
.+++..+.||.|.- |.||+.+..|+.+|+|.++. ... .....|..|.+..++|+ +
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~ 116 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR 116 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence 78888999999999 99999999999999999431 100 12245889999988884 4
Q ss_pred Cce--eeEeeEEEcc-----------------CCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 048535 168 RNL--VGLRGWCKKE-----------------KESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYL 228 (409)
Q Consensus 168 ~ni--v~l~g~~~~~-----------------~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yL 228 (409)
.++ |+.+||..-. .....||.||.+... .++.. -+.+|.+-|..+
T Consensus 117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~~~----~~~~~~~dl~~~ 180 (207)
T PF13095_consen 117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQIR----DIPQMLRDLKIL 180 (207)
T ss_pred cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccchh----HHHHHHHHHHHH
Confidence 456 9999988421 112467888876632 22322 344566777889
Q ss_pred HhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 229 YEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 229 H~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
| ..+|+-+|+|+.|.. .-||+|||.+
T Consensus 181 ~---k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 181 H---KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred H---HCCeeeccCcccccc-----CCEEEecccC
Confidence 9 899999999999975 3589999965
No 461
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.24 E-value=5.9e-06 Score=83.64 Aligned_cols=142 Identities=20% Similarity=0.208 Sum_probs=91.4
Q ss_pred ceeecCCceEEEEEEEC-CcEEEEEEeccCChHH-------------------------------------HHHHHHHHH
Q 048535 119 NVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHG-------------------------------------MREFLAEVS 160 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~-------------------------------------~~~~~~E~~ 160 (409)
+.||.-+.|.||+|+++ |+.||||+-+.+-.+. .-+|.+|++
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 67999999999999998 9999999986541111 012555665
Q ss_pred HhccC----CCCc---eeeEeeEEEccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 048535 161 SLGRL----KHRN---LVGLRGWCKKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWE 233 (409)
Q Consensus 161 ~l~~l----~H~n---iv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~ 233 (409)
-..++ .|-+ =|.+=.++.+-.....|+||||+|..+.+.-.- ....++...+..-+. ++ |++....
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i--~~~gi~~~~i~~~l~---~~--~~~qIf~ 319 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAI--DKRGISPHDILNKLV---EA--YLEQIFK 319 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHH--HHcCCCHHHHHHHHH---HH--HHHHHHh
Confidence 54443 3555 122223333323467899999999877654321 122355554333333 32 2222224
Q ss_pred CceeecCCCCCCeeeCC----CCcEEEecccCcccccC
Q 048535 234 SKVLHRDIKASNVLLDK----KMNARLGDFGLAKMHHH 267 (409)
Q Consensus 234 ~~ivHrDlKp~NILl~~----~~~~kl~DFGla~~~~~ 267 (409)
.|++|+|=.|.||+++. ++++.+-|||+.....+
T Consensus 320 ~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 320 TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 67999999999999984 67899999999876654
No 462
>PLN02876 acyl-CoA dehydrogenase
Probab=98.21 E-value=1.9e-05 Score=85.78 Aligned_cols=78 Identities=14% Similarity=0.209 Sum_probs=57.0
Q ss_pred cceeecCCceEEEEEEECC----cEEEEEEeccCC-hHHHHHHHHHHHHhccCC-CCce--eeEeeEEEccC--CeEEEE
Q 048535 118 ENVIGLGGNGKVYKGQLLG----VEVALKRISLDS-EHGMREFLAEVSSLGRLK-HRNL--VGLRGWCKKEK--ESLILI 187 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~~----~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~-H~ni--v~l~g~~~~~~--~~~~lv 187 (409)
.+.++.|.++.+|+....+ ..+++|+..... ......+.+|+++|+.+. |.++ .+++++|.+.. +..|+|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 4678999999999987763 467888765432 123356889999999995 6665 77888876521 457899
Q ss_pred EEeCCCCC
Q 048535 188 YDYMENGS 195 (409)
Q Consensus 188 ~E~~~~gs 195 (409)
|||+++..
T Consensus 123 ME~v~G~~ 130 (822)
T PLN02876 123 MEYLEGRI 130 (822)
T ss_pred EEecCCcc
Confidence 99998754
No 463
>PRK10593 hypothetical protein; Provisional
Probab=98.00 E-value=9.2e-05 Score=70.62 Aligned_cols=79 Identities=13% Similarity=-0.049 Sum_probs=57.4
Q ss_pred CccceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCC---CceeeEeeEEEcc--CCeEEEEEEe
Q 048535 116 SEENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKH---RNLVGLRGWCKKE--KESLILIYDY 190 (409)
Q Consensus 116 ~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~g~~~~~--~~~~~lv~E~ 190 (409)
...+.||.|..+.||+-...+..+.+|..+... ....|..|.+.|+.|.- -.+.+++++|..+ .+..+||||+
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~ 94 (297)
T PRK10593 17 SRVECISEQPYAALWALYDSQGNPMPLMARSFS--TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER 94 (297)
T ss_pred heeeecCCccceeEEEEEcCCCCEEEEEecccc--cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence 335679999999999987765567777754311 22578899999988843 3577888877542 3568999999
Q ss_pred CCCCCH
Q 048535 191 MENGSL 196 (409)
Q Consensus 191 ~~~gsL 196 (409)
++++++
T Consensus 95 i~G~~~ 100 (297)
T PRK10593 95 LRGVSV 100 (297)
T ss_pred cCCEec
Confidence 998765
No 464
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.00 E-value=0.00013 Score=65.08 Aligned_cols=134 Identities=19% Similarity=0.340 Sum_probs=89.5
Q ss_pred CccceeecCCceEEEEEEECCcEEEEEEeccCC----------------hHHHHHHHHHHHHhccCC------CCceeeE
Q 048535 116 SEENVIGLGGNGKVYKGQLLGVEVALKRISLDS----------------EHGMREFLAEVSSLGRLK------HRNLVGL 173 (409)
Q Consensus 116 ~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~----------------~~~~~~~~~E~~~l~~l~------H~niv~l 173 (409)
+....||+|+.=.||.--. .....||+..... ....+++.+|+.....+. +.+|.++
T Consensus 4 ~~~~~i~~G~~R~cy~HP~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 4 SESDLIAQGGERDCYQHPD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCCcccccCCCceEEECCC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 3456799999999986333 3446788876554 122456667776655554 7889999
Q ss_pred eeEEEccCCeEEEEEEeCCC------CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCee
Q 048535 174 RGWCKKEKESLILIYDYMEN------GSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVL 247 (409)
Q Consensus 174 ~g~~~~~~~~~~lv~E~~~~------gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 247 (409)
+|+..+ +...-+|+|.+.+ -+|.+++.+ ..++. ...+.+.+. ..||- +..|+.+|++|.||+
T Consensus 83 ~G~veT-~~G~Glv~e~I~d~dG~~s~TL~~~l~~----~~~~~-~~~~~L~~f---~~~l~---~~~Iv~~dl~~~NIv 150 (199)
T PF10707_consen 83 YGFVET-NLGLGLVVELIRDADGNISPTLEDYLKE----GGLTE-ELRQALDEF---KRYLL---DHHIVIRDLNPHNIV 150 (199)
T ss_pred eEEEec-CCceEEEEEEEECCCCCcCccHHHHHHc----CCccH-HHHHHHHHH---HHHHH---HcCCeecCCCcccEE
Confidence 999987 5556788888753 257888832 23555 334343333 45566 678999999999999
Q ss_pred eCCCC----cEEEec-ccCc
Q 048535 248 LDKKM----NARLGD-FGLA 262 (409)
Q Consensus 248 l~~~~----~~kl~D-FGla 262 (409)
+.... .+.|.| ||-.
T Consensus 151 ~~~~~~~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 151 VQRRDSGEFRLVLIDGLGEK 170 (199)
T ss_pred EEecCCCceEEEEEeCCCCc
Confidence 95432 477777 4543
No 465
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=97.94 E-value=4.1e-06 Score=88.72 Aligned_cols=271 Identities=17% Similarity=0.139 Sum_probs=150.5
Q ss_pred hCCCCccceeecCCceEEEEEEEC--CcEEEEEEeccCC---hHHHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEE
Q 048535 112 TKGFSEENVIGLGGNGKVYKGQLL--GVEVALKRISLDS---EHGMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 112 ~~~f~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~l 186 (409)
.++|.+.+-+-+|.++.++.+.-. |...+.|...... ..+.+....+-.++-..+||-++...--+.. ....+|
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~-rsP~~L 881 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC-RSPLPL 881 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC-CCCcch
Confidence 355666677888999998876554 4444444433221 1112222233333333345666655443222 567899
Q ss_pred EEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 187 IYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 187 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
+++|+.+++|...|+.. ...+..........+.++++||| ...+.|||++|.|+|+..++..+++|||+.....
T Consensus 882 ~~~~~~~~~~~Skl~~~---~~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNS---GCLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred hhHHhccCCchhhhhcC---CCcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCccccccccc
Confidence 99999999999998643 35666666777888999999999 6779999999999999999999999999554322
Q ss_pred CCceeeec-----------cccccCCCcHHHH-----HHhhhccCcH-HHHhhHHhhhcCCCCHHHHHHHHHHHHHccCc
Q 048535 267 HGQVMSGR-----------RPIEEGKRNLVDR-----MWSLTERSEL-LSVLDERLKAKGGYADEVVEKVLHLGLLCAHP 329 (409)
Q Consensus 267 ~~~~~~g~-----------~p~~~~~~~~~~~-----vws~~~~~~~-~~~~~~~l~~~~~~~~~~~~~l~~l~~~Cl~~ 329 (409)
--.-.++. .+.......+..+ .-.......+ .+..-.+-. +. ..++...-..+....+-.
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~h--gs-~ad~~~~g~~l~e~l~g~ 1032 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRH--GS-AADWWSSGVCLFEVLTGI 1032 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccC--CC-cchhhhhhhhhhhhhcCC
Confidence 11001111 0000000111111 0000000000 000000000 11 111111112222233344
Q ss_pred CCCCCCCHHHHHHHH-hcCcCCCCCCCCCc--chhHHhhhcccCCCCccccc---ccCCCCCccccccc
Q 048535 330 EANSRPTIRQVLKML-EGQTEGTGLEDEGM--NVHLLKRIGTRAMTSSWKFA---GSRGHPTFNEINKN 392 (409)
Q Consensus 330 dP~~RPt~~evl~~L-~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~---~~~~hp~~~~~~~~ 392 (409)
-|.+=++-+++.+-+ .+....+.-+.... .-++..+.+..++.+|.... +.-.||+|..++-.
T Consensus 1033 pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1033 PPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWE 1101 (1205)
T ss_pred CCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCcc
Confidence 555666777776543 33333333332222 25777888889999999866 88899999987743
No 466
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.90 E-value=9e-05 Score=68.09 Aligned_cols=74 Identities=15% Similarity=0.165 Sum_probs=44.9
Q ss_pred ceeecCCce-EEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCCC---ceeeEeeEEEccC--CeEEEEEEeCC
Q 048535 119 NVIGLGGNG-KVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKHR---NLVGLRGWCKKEK--ESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg-~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~~--~~~~lv~E~~~ 192 (409)
+.|+.|+.. .||+. +..+.+|..+... ....+.+|.++|..+... -+.++++...... ...+++||+++
T Consensus 3 ~~~~~gG~~n~vy~~---~~~~VlR~~~~~~--~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~ 77 (235)
T cd05155 3 EPVDSGGTDNATFRL---GDDMSVRLPSAAG--YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE 77 (235)
T ss_pred eeccCCCcccceEEc---CCceEEEcCCccc--hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence 567777766 48874 3457777755322 235788899998877422 2334444332211 23578999999
Q ss_pred CCCHH
Q 048535 193 NGSLD 197 (409)
Q Consensus 193 ~gsL~ 197 (409)
|.++.
T Consensus 78 G~~l~ 82 (235)
T cd05155 78 GETAT 82 (235)
T ss_pred CCCCC
Confidence 87663
No 467
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.80 E-value=0.00012 Score=68.21 Aligned_cols=139 Identities=14% Similarity=0.051 Sum_probs=79.7
Q ss_pred eecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCCCce-eeEeeEEEccCCeEEEEEEeCCCCCHHHH
Q 048535 121 IGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNL-VGLRGWCKKEKESLILIYDYMENGSLDKW 199 (409)
Q Consensus 121 lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~~lv~E~~~~gsL~~~ 199 (409)
+..|-.+.+|+....+..+++|..........-...+|.++++.+....+ .++++.+ . -++||||++|..+..-
T Consensus 4 ~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~---~--~~~v~e~i~G~~~~~~ 78 (256)
T TIGR02721 4 LSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN---E--HWLLVEWLEGEVITLD 78 (256)
T ss_pred CCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe---C--CEEEEEeccCcccccc
Confidence 45677889999887788899987654322111134678888888854333 3344332 1 2589999998665321
Q ss_pred -----------------HhcCCC-CCCCCHHH-HHHHHHHH---------HHHHHHHHhc-----CCCceeecCCCCCCe
Q 048535 200 -----------------IFECDE-SIALSWEQ-RIKVLKDV---------ASGILYLYEG-----WESKVLHRDIKASNV 246 (409)
Q Consensus 200 -----------------l~~~~~-~~~l~~~~-~~~i~~~i---------a~gL~yLH~~-----~~~~ivHrDlKp~NI 246 (409)
||.... ..+++... ...+..++ ..-+..+-.. ....++|+|+.|.||
T Consensus 79 ~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Ni 158 (256)
T TIGR02721 79 QFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNL 158 (256)
T ss_pred cccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcE
Confidence 121111 11222221 11211111 1111112111 124689999999999
Q ss_pred eeCCCCcEEEecccCcccc
Q 048535 247 LLDKKMNARLGDFGLAKMH 265 (409)
Q Consensus 247 Ll~~~~~~kl~DFGla~~~ 265 (409)
|+++++ +.|.||..|..-
T Consensus 159 l~~~~~-~~lIDwE~a~~g 176 (256)
T TIGR02721 159 VVTPQG-LKLIDWEYASDG 176 (256)
T ss_pred EEeCCC-CEEEeccccCcC
Confidence 999877 789999988653
No 468
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.67 E-value=0.00066 Score=67.00 Aligned_cols=75 Identities=15% Similarity=0.092 Sum_probs=53.0
Q ss_pred cceeecCCceEEEEEEEC-C-cEEEEEEeccC------C-hHHHHHHHHHHHHhccCC---CCceeeEeeEEEccCCeEE
Q 048535 118 ENVIGLGGNGKVYKGQLL-G-VEVALKRISLD------S-EHGMREFLAEVSSLGRLK---HRNLVGLRGWCKKEKESLI 185 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~-~-~~vAvK~~~~~------~-~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~ 185 (409)
.+.||.|.+..||+.... | +.|.||.-... . +-..+++..|.+.|..+. -.++.+++.+. ....+
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D---~~~~~ 107 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD---EELAV 107 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC---CCCCE
Confidence 367999999999999988 4 48999985411 1 223456777888888762 24566777653 34567
Q ss_pred EEEEeCCCCC
Q 048535 186 LIYDYMENGS 195 (409)
Q Consensus 186 lv~E~~~~gs 195 (409)
+||||+++..
T Consensus 108 lVME~L~~~~ 117 (401)
T PRK09550 108 TVMEDLSDHK 117 (401)
T ss_pred EEEecCCCcc
Confidence 9999998743
No 469
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.65 E-value=0.00051 Score=62.93 Aligned_cols=140 Identities=16% Similarity=0.132 Sum_probs=80.8
Q ss_pred ceeecCCceEEEEEEEC---CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCce-eeEeeEEEccCCeEEEEEEeCCCC
Q 048535 119 NVIGLGGNGKVYKGQLL---GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNL-VGLRGWCKKEKESLILIYDYMENG 194 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~~lv~E~~~~g 194 (409)
+.|..|-...+|+.... +..|.+|........ .-...+|+.++..+...++ .++++.+. . .++|||++|.
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~---~~l~e~i~G~ 77 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ--N---GLIYEFIPGR 77 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC--C---cEEEEeeCCC
Confidence 56778888999998876 578999977543221 1123468888888843333 44444332 2 3799999986
Q ss_pred CHHHH-----------------HhcCCCCC--------CC-CHHHHHHHHHH----------------------HH---H
Q 048535 195 SLDKW-----------------IFECDESI--------AL-SWEQRIKVLKD----------------------VA---S 223 (409)
Q Consensus 195 sL~~~-----------------l~~~~~~~--------~l-~~~~~~~i~~~----------------------ia---~ 223 (409)
++... +|...... .. .+..+..+... +. .
T Consensus 78 ~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 157 (235)
T cd05157 78 TLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEIS 157 (235)
T ss_pred cCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHH
Confidence 65311 11111110 11 12222222111 11 1
Q ss_pred HHH-HHHhc-CCCceeecCCCCCCeeeCC-CCcEEEecccCccc
Q 048535 224 GIL-YLYEG-WESKVLHRDIKASNVLLDK-KMNARLGDFGLAKM 264 (409)
Q Consensus 224 gL~-yLH~~-~~~~ivHrDlKp~NILl~~-~~~~kl~DFGla~~ 264 (409)
.|. .+-.. ....++|+|+.+.|||++. +..+.|.||..|..
T Consensus 158 ~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 158 WLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred HHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 111 11110 1357999999999999998 57899999998864
No 470
>PRK05231 homoserine kinase; Provisional
Probab=97.61 E-value=0.0012 Score=63.56 Aligned_cols=158 Identities=17% Similarity=0.126 Sum_probs=83.2
Q ss_pred cHHHHHHHhCCCCc-----cceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccC-----CCCceeeE
Q 048535 104 SYQEIHAATKGFSE-----ENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRL-----KHRNLVGL 173 (409)
Q Consensus 104 ~~~~l~~~~~~f~~-----~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l 173 (409)
+.+++......|.. .+.|+.|....+|+....+..+++|+...... .....|+.++..| .-|.+++-
T Consensus 8 s~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~~~~~---~~l~~~~~~l~~L~~~glpvP~~i~~ 84 (319)
T PRK05231 8 SDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQGEYVLTLFERLTA---EDLPFFLGLMQHLAARGVPVPAPVAR 84 (319)
T ss_pred CHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCCcEEEEEeccCCh---HHhHHHHHHHHHHHHCCCCCCcceeC
Confidence 34444444444543 34566777789999887756789998762222 2233344444444 23333321
Q ss_pred e-e-EEEccCCeEEEEEEeCCCCCHH-----------HH---HhcCCC--------CCCCCH-HHHHHH-----------
Q 048535 174 R-G-WCKKEKESLILIYDYMENGSLD-----------KW---IFECDE--------SIALSW-EQRIKV----------- 217 (409)
Q Consensus 174 ~-g-~~~~~~~~~~lv~E~~~~gsL~-----------~~---l~~~~~--------~~~l~~-~~~~~i----------- 217 (409)
. | .+....+..++++||++|..+. +. +|.... ...+.| .....-
T Consensus 85 ~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (319)
T PRK05231 85 RDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAA 164 (319)
T ss_pred CCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHH
Confidence 1 1 0111145678999999986431 11 111110 011212 111111
Q ss_pred -HHH-HHHHHHHHHh----cCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 218 -LKD-VASGILYLYE----GWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 218 -~~~-ia~gL~yLH~----~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
..+ +...++.+.. ....+++|+|+.|.|||++.+...-|.||+.+..
T Consensus 165 ~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 165 LLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred HHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 111 1112223321 1246899999999999998766568999998854
No 471
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.59 E-value=0.0007 Score=64.34 Aligned_cols=144 Identities=15% Similarity=0.090 Sum_probs=86.4
Q ss_pred cceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCCCc--eeeEeeE-----EEccCCeEEEEEEe
Q 048535 118 ENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKHRN--LVGLRGW-----CKKEKESLILIYDY 190 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~-----~~~~~~~~~lv~E~ 190 (409)
.+.|..|....+|+....+..+++|+.... .......|++++..+.+.+ +.+++.. .....+..+++++|
T Consensus 19 i~~i~~G~~n~~y~v~~~~~~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~ 95 (296)
T cd05153 19 FEGISAGIENTNYFVTTDSGRYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF 95 (296)
T ss_pred eecccCccccceEEEEeCCCcEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence 456777887899998777778999987642 2345667788777774332 4444331 11113456899999
Q ss_pred CCCCCHHH-----------H---HhcC----CCC----CCCCHHHHH----------HHHHHHHHHHHHHHh----cCCC
Q 048535 191 MENGSLDK-----------W---IFEC----DES----IALSWEQRI----------KVLKDVASGILYLYE----GWES 234 (409)
Q Consensus 191 ~~~gsL~~-----------~---l~~~----~~~----~~l~~~~~~----------~i~~~ia~gL~yLH~----~~~~ 234 (409)
++|..+.. . +|.. ... ....|.... .....+..++.++.. ....
T Consensus 96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (296)
T cd05153 96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR 175 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 99866432 0 1111 000 111222211 011123334444442 1235
Q ss_pred ceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 235 KVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 235 ~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
.++|+|+.|.|||++++..+.|.||+.+..
T Consensus 176 ~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 176 GVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred cCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 799999999999999987778999998754
No 472
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.40 E-value=0.0028 Score=60.65 Aligned_cols=145 Identities=14% Similarity=0.066 Sum_probs=83.0
Q ss_pred cceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCCC--ceeeEeeEE-----EccCCeEEEEEEe
Q 048535 118 ENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKHR--NLVGLRGWC-----KKEKESLILIYDY 190 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~g~~-----~~~~~~~~lv~E~ 190 (409)
.+.++.|....+|+....+..+.+|+...... ......|++++..|... .+.+++... ....+..++++||
T Consensus 27 i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~~--~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~ 104 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVGRYILTLYEKRVK--AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF 104 (307)
T ss_pred ccccCCccccceEEEEeCCCcEEEEEecCCCC--HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence 45577777789999877655788898754311 23344566666666322 233443311 1123567899999
Q ss_pred CCCCCHH-----------HH---HhcCCCC------C---CCCHHHHHH------------HHHHHHHHHHHHHh----c
Q 048535 191 MENGSLD-----------KW---IFECDES------I---ALSWEQRIK------------VLKDVASGILYLYE----G 231 (409)
Q Consensus 191 ~~~gsL~-----------~~---l~~~~~~------~---~l~~~~~~~------------i~~~ia~gL~yLH~----~ 231 (409)
++|..+. .. +|..... . .-.|..... ....+.+.++++.. .
T Consensus 105 i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~ 184 (307)
T TIGR00938 105 LQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRD 184 (307)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhc
Confidence 9885432 11 1211010 0 011211110 11223345555542 2
Q ss_pred CCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 232 WESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 232 ~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
...+++|+|+.+.||+++.++...|.||+.+..
T Consensus 185 ~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 185 LPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred CCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 357899999999999999887778999998754
No 473
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.29 E-value=0.0016 Score=62.06 Aligned_cols=141 Identities=25% Similarity=0.270 Sum_probs=82.6
Q ss_pred ceeecCCceEEEEEEEC--------CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCce-eeEeeEEEccCCeEEEEEE
Q 048535 119 NVIGLGGNGKVYKGQLL--------GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNL-VGLRGWCKKEKESLILIYD 189 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~--------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~~lv~E 189 (409)
+.+..|-...+|+.... ++.+++|+...... ......+|.+++..+....+ .++++++. + .+|+|
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~r~~E~~~~~~l~~~g~~P~~~~~~~--~---~~v~e 77 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE-LLIDRERELVVFARLSERNLGPKLYGIFP--N---GRIEE 77 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc-ceechHHHHHHHHHHHhCCCCCceEEEeC--C---Cchhh
Confidence 45666777789988765 37899999754422 22345678888887743333 34555443 2 25899
Q ss_pred eCCCCCHHHH-----------------HhcCCCCC--------CCCHHHHHH--------------------------HH
Q 048535 190 YMENGSLDKW-----------------IFECDESI--------ALSWEQRIK--------------------------VL 218 (409)
Q Consensus 190 ~~~~gsL~~~-----------------l~~~~~~~--------~l~~~~~~~--------------------------i~ 218 (409)
|++|..+... +|...... +.-|..... +.
T Consensus 78 ~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (302)
T cd05156 78 FIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFL 157 (302)
T ss_pred eeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHH
Confidence 9988765431 11111110 011111111 11
Q ss_pred HHHHHHHHHHHh------cCCCceeecCCCCCCeeeCCC----CcEEEecccCcccc
Q 048535 219 KDVASGILYLYE------GWESKVLHRDIKASNVLLDKK----MNARLGDFGLAKMH 265 (409)
Q Consensus 219 ~~ia~gL~yLH~------~~~~~ivHrDlKp~NILl~~~----~~~kl~DFGla~~~ 265 (409)
..+..-+.+|-. .....++|+|+.+.|||++++ +.++++||..|...
T Consensus 158 ~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~ 214 (302)
T cd05156 158 EDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYN 214 (302)
T ss_pred HHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCC
Confidence 122223334431 135679999999999999985 78999999998653
No 474
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.12 E-value=0.0054 Score=58.60 Aligned_cols=131 Identities=14% Similarity=0.153 Sum_probs=78.8
Q ss_pred eEEEEEEECCcEEEEEEecc--CChHHHHHHHHHHHHhccCCC--CceeeEeeEEEccC-CeEEEEEEeCCCCCHHHHHh
Q 048535 127 GKVYKGQLLGVEVALKRISL--DSEHGMREFLAEVSSLGRLKH--RNLVGLRGWCKKEK-ESLILIYDYMENGSLDKWIF 201 (409)
Q Consensus 127 g~Vy~~~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~-~~~~lv~E~~~~gsL~~~l~ 201 (409)
-.+|.....++++.+. ... ..........+|..+|+.+.- --+-+.++.|.++. +..+.||+|++|..+.+.+.
T Consensus 39 n~t~~~~~~~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~ 117 (321)
T COG3173 39 NDTFRLGDTGQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALP 117 (321)
T ss_pred cceEEEecCCceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCC
Confidence 3445544447778887 331 223344556678888877742 23445677787644 46789999998843322221
Q ss_pred cCCCCCCCCHHHHHHHH-HHHHHHHHHHHh--------------------------------------------------
Q 048535 202 ECDESIALSWEQRIKVL-KDVASGILYLYE-------------------------------------------------- 230 (409)
Q Consensus 202 ~~~~~~~l~~~~~~~i~-~~ia~gL~yLH~-------------------------------------------------- 230 (409)
. .... .+++ ..+++.|.-||.
T Consensus 118 ~----~~~~----~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~ 189 (321)
T COG3173 118 P----ESLG----RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEA 189 (321)
T ss_pred c----ccch----HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHh
Confidence 0 0000 1111 133333333332
Q ss_pred c-----CCCceeecCCCCCCeeeCCCCcEEEecccCccccc
Q 048535 231 G-----WESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHH 266 (409)
Q Consensus 231 ~-----~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 266 (409)
. ....++|+|+.+.|++++.+...=|.||+++..-+
T Consensus 190 ~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD 230 (321)
T COG3173 190 NRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD 230 (321)
T ss_pred cCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence 1 13569999999999999998889999999997644
No 475
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.97 E-value=0.0094 Score=56.19 Aligned_cols=32 Identities=25% Similarity=0.455 Sum_probs=26.7
Q ss_pred CceeecCCCCCCeeeCCCCc-EEEecccCcccc
Q 048535 234 SKVLHRDIKASNVLLDKKMN-ARLGDFGLAKMH 265 (409)
Q Consensus 234 ~~ivHrDlKp~NILl~~~~~-~kl~DFGla~~~ 265 (409)
..++|+|+.|.|||++++++ .-|.||+.+..-
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG 217 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKVG 217 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence 45899999999999997555 469999998754
No 476
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=96.92 E-value=0.0017 Score=69.06 Aligned_cols=64 Identities=14% Similarity=0.111 Sum_probs=38.5
Q ss_pred eecCCCCC-CeeeCCCCcEEEecccCcccccCCc------eeeeccccc------cCCCcHHHHHHhhhccCcHHHHhh
Q 048535 237 LHRDIKAS-NVLLDKKMNARLGDFGLAKMHHHGQ------VMSGRRPIE------EGKRNLVDRMWSLTERSELLSVLD 302 (409)
Q Consensus 237 vHrDlKp~-NILl~~~~~~kl~DFGla~~~~~~~------~~~g~~p~~------~~~~~~~~~vws~~~~~~~~~~~~ 302 (409)
.|++.+|. |++++.+...++.|||.++....+. ...|...+. ...++...|+|+++ ..+++++.
T Consensus 499 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG--~il~Ellt 575 (669)
T cd05610 499 PTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALG--VCLFEFLT 575 (669)
T ss_pred CCCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHH--HHHHHHHH
Confidence 34555555 6677777778899999987754332 123333322 24467789999985 33444443
No 477
>PLN02236 choline kinase
Probab=96.87 E-value=0.0082 Score=58.51 Aligned_cols=140 Identities=16% Similarity=0.181 Sum_probs=80.6
Q ss_pred ceeecCCceEEEEEEEC------CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCce-eeEeeEEEccCCeEEEEEEeC
Q 048535 119 NVIGLGGNGKVYKGQLL------GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNL-VGLRGWCKKEKESLILIYDYM 191 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~~lv~E~~ 191 (409)
..|-.|-...+|+.... ++.|.+|........... -.+|..++..+..-++ .++++.+. ++ .|+||+
T Consensus 42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~--~g---~v~efi 115 (344)
T PLN02236 42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFP--NG---RVEEFI 115 (344)
T ss_pred EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEEC--Cc---eEEEee
Confidence 34445667788887753 367889887654322222 2578888888854444 34555543 22 589999
Q ss_pred CCCCHHHH-----------------HhcCCC---CCCCCHHHHHHHHHHH-----------------HHHHHHH----Hh
Q 048535 192 ENGSLDKW-----------------IFECDE---SIALSWEQRIKVLKDV-----------------ASGILYL----YE 230 (409)
Q Consensus 192 ~~gsL~~~-----------------l~~~~~---~~~l~~~~~~~i~~~i-----------------a~gL~yL----H~ 230 (409)
++.+|..- +|.... .....|....++..++ ...+..| ..
T Consensus 116 ~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~ 195 (344)
T PLN02236 116 HARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSG 195 (344)
T ss_pred CCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcc
Confidence 87665421 121111 1112233333332221 1112222 11
Q ss_pred -cCCCceeecCCCCCCeeeCC-CCcEEEecccCccc
Q 048535 231 -GWESKVLHRDIKASNVLLDK-KMNARLGDFGLAKM 264 (409)
Q Consensus 231 -~~~~~ivHrDlKp~NILl~~-~~~~kl~DFGla~~ 264 (409)
.....++|+|+++.|||+++ ++.+.+.||..|..
T Consensus 196 ~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 196 DDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred cCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 12457899999999999986 46799999998865
No 478
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.80 E-value=0.0016 Score=61.55 Aligned_cols=129 Identities=16% Similarity=0.135 Sum_probs=90.0
Q ss_pred CCccceeecCCceEEEEEEEC-CcEEEEEEeccCCh-----H-----------------HHHHHHHHHHHhccCC-CC-c
Q 048535 115 FSEENVIGLGGNGKVYKGQLL-GVEVALKRISLDSE-----H-----------------GMREFLAEVSSLGRLK-HR-N 169 (409)
Q Consensus 115 f~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~-----~-----------------~~~~~~~E~~~l~~l~-H~-n 169 (409)
+...+.||-|--+.||.+-.. |.+.++|.-+.... . .+-...+|...|+.|. |. -
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp 173 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP 173 (465)
T ss_pred hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence 577899999999999999888 88888886442200 0 0123467888888883 32 2
Q ss_pred eeeEeeEEEccCCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeC
Q 048535 170 LVGLRGWCKKEKESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLD 249 (409)
Q Consensus 170 iv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~ 249 (409)
|.+.++ .+..++|||++.+-.|.+.-+ ..+..++..-+.++ +.-|. ..++||+|..-=||+++
T Consensus 174 VPkpiD-----~~RH~Vvmelv~g~Pl~~v~~------v~d~~~ly~~lm~~---Iv~la---~~GlIHgDFNEFNimv~ 236 (465)
T KOG2268|consen 174 VPKPID-----HNRHCVVMELVDGYPLRQVRH------VEDPPTLYDDLMGL---IVRLA---NHGLIHGDFNEFNIMVK 236 (465)
T ss_pred CCCccc-----ccceeeHHHhhcccceeeeee------cCChHHHHHHHHHH---HHHHH---HcCceecccchheeEEe
Confidence 444554 345689999998877765431 22334444333333 33444 78999999999999999
Q ss_pred CCCcEEEeccc
Q 048535 250 KKMNARLGDFG 260 (409)
Q Consensus 250 ~~~~~kl~DFG 260 (409)
+++.++++||=
T Consensus 237 dd~~i~vIDFP 247 (465)
T KOG2268|consen 237 DDDKIVVIDFP 247 (465)
T ss_pred cCCCEEEeech
Confidence 99999999995
No 479
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.76 E-value=0.031 Score=55.24 Aligned_cols=80 Identities=15% Similarity=0.064 Sum_probs=53.3
Q ss_pred cceeecCCceEEEEEEECCcEEEEEEeccC----Ch---HHHHHHHHHHHHhccCC---CCceeeEeeEEEccCCeEEEE
Q 048535 118 ENVIGLGGNGKVYKGQLLGVEVALKRISLD----SE---HGMREFLAEVSSLGRLK---HRNLVGLRGWCKKEKESLILI 187 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~----~~---~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~lv 187 (409)
.+.||.|....||+....+..+.||+-... .. ....+-..|.+.|+.+. ..++.+++.++.+ ..+++
T Consensus 37 ~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded---~~vlv 113 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT---MALIG 113 (418)
T ss_pred EEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC---CCEEE
Confidence 567899999999998877777999987521 11 12333344566666553 3467788887753 35789
Q ss_pred EEeCCC--CCHHHHH
Q 048535 188 YDYMEN--GSLDKWI 200 (409)
Q Consensus 188 ~E~~~~--gsL~~~l 200 (409)
|||+++ ..+.+.+
T Consensus 114 ME~L~~~~~ilr~~L 128 (418)
T PLN02756 114 MRYLEPPHIILRKGL 128 (418)
T ss_pred EeecCCcceehhhhh
Confidence 999977 3454443
No 480
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=96.69 E-value=0.0014 Score=67.25 Aligned_cols=47 Identities=21% Similarity=0.442 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccC
Q 048535 219 KDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHH 267 (409)
Q Consensus 219 ~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 267 (409)
.+++.||.|+|. +.++||++|.|++|.++.++..||+.|+.+-....
T Consensus 106 ~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~ 152 (700)
T KOG2137|consen 106 GNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANG 152 (700)
T ss_pred hcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCC
Confidence 345599999997 78999999999999999999999999998755433
No 481
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.58 E-value=0.025 Score=54.92 Aligned_cols=79 Identities=13% Similarity=0.007 Sum_probs=50.3
Q ss_pred ceeecCCceEEEEEEECC--cEEEEEEeccC-------ChHHHHHHHHHHHHhccCC--CC-ceeeEeeEEEccCCeEEE
Q 048535 119 NVIGLGGNGKVYKGQLLG--VEVALKRISLD-------SEHGMREFLAEVSSLGRLK--HR-NLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~~--~~vAvK~~~~~-------~~~~~~~~~~E~~~l~~l~--H~-niv~l~g~~~~~~~~~~l 186 (409)
++||.|....||++...+ +.|+||.-..- -+-...+..-|.+.|+... -| .+.+++.+ + .....+
T Consensus 1 ~EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D-~e~~~~ 77 (370)
T TIGR01767 1 QEVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--D-TEMAVT 77 (370)
T ss_pred CcCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--c-ccccee
Confidence 358999999999999873 68999986321 1223345556777776652 34 34455543 2 445668
Q ss_pred EEEeCCCC-CHHHHH
Q 048535 187 IYDYMENG-SLDKWI 200 (409)
Q Consensus 187 v~E~~~~g-sL~~~l 200 (409)
|||+++.. .|++.|
T Consensus 78 vMEdL~~~~ilR~~L 92 (370)
T TIGR01767 78 VMEDLSHHKIARKGL 92 (370)
T ss_pred hHhhCccchHHHHHH
Confidence 99999653 344444
No 482
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.56 E-value=0.013 Score=56.55 Aligned_cols=142 Identities=18% Similarity=0.236 Sum_probs=95.9
Q ss_pred ccceeecCCceEEEEEEEC-CcEEEEEEeccC-----C-------------------hHH-H-HHHHHHHHHhccCCCCc
Q 048535 117 EENVIGLGGNGKVYKGQLL-GVEVALKRISLD-----S-------------------EHG-M-REFLAEVSSLGRLKHRN 169 (409)
Q Consensus 117 ~~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~-----~-------------------~~~-~-~~~~~E~~~l~~l~H~n 169 (409)
+..+|..|--+.||.++-. |..+|||+.+.. + +.. . --...|++-|.+|+...
T Consensus 148 inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aG 227 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAG 227 (520)
T ss_pred cccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 3457888999999999887 999999998632 0 000 0 11245788888876544
Q ss_pred eeeEeeEEEccCCeEEEEEEeCCCCCH-HHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeee
Q 048535 170 LVGLRGWCKKEKESLILIYDYMENGSL-DKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLL 248 (409)
Q Consensus 170 iv~l~g~~~~~~~~~~lv~E~~~~gsL-~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl 248 (409)
|.-.--... . ...|||+|+..... .-.| ....++...+..+-.|++.-|.-|.+ ..++||.||.-=|+|+
T Consensus 228 IP~PePIlL--k-~hVLVM~FlGrdgw~aPkL----Kd~~ls~~ka~~~Y~~~v~~MR~lY~--~c~LVHADLSEfN~Ly 298 (520)
T KOG2270|consen 228 IPCPEPILL--K-NHVLVMEFLGRDGWAAPKL----KDASLSTSKARELYQQCVRIMRRLYQ--KCRLVHADLSEFNLLY 298 (520)
T ss_pred CCCCCceee--e-cceEeeeeccCCCCcCccc----ccccCChHHHHHHHHHHHHHHHHHHH--HhceeccchhhhhheE
Confidence 321111111 1 23689999964221 1122 23457777888888899999988886 6789999999999999
Q ss_pred CCCCcEEEecccCcccccCC
Q 048535 249 DKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 249 ~~~~~~kl~DFGla~~~~~~ 268 (409)
. +|.+.|+|-+-+-..+++
T Consensus 299 h-dG~lyiIDVSQSVE~DHP 317 (520)
T KOG2270|consen 299 H-DGKLYIIDVSQSVEHDHP 317 (520)
T ss_pred E-CCEEEEEEccccccCCCh
Confidence 5 567999998877655443
No 483
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.56 E-value=0.018 Score=54.50 Aligned_cols=75 Identities=19% Similarity=0.256 Sum_probs=46.9
Q ss_pred CccceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCC---CCceeeEeeEEEccCCeEEEEEEeCC
Q 048535 116 SEENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLK---HRNLVGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 116 ~~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+..+.++.|....+|+....++.+-||.-.. .....|..|.+-|+.|. --.+.+.+++... .+..+||+||++
T Consensus 20 ~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~---~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~-~~~~fLlle~l~ 95 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLDTDGGSYFVKVNSE---SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEY-DDDAFLLLEFLE 95 (288)
T ss_dssp -EEEEE--SSSSEEEEEETTS-EEEEEEEEG---GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE--SSCCEEEEE---
T ss_pred eeeEecCCCChhheEEEECCCccEEEEecCh---hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEee-cCCceEEEEeec
Confidence 3456789999999999887789999998762 22356778888887773 3446778887765 445589999998
Q ss_pred CC
Q 048535 193 NG 194 (409)
Q Consensus 193 ~g 194 (409)
.+
T Consensus 96 ~~ 97 (288)
T PF03881_consen 96 MG 97 (288)
T ss_dssp --
T ss_pred CC
Confidence 76
No 484
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=96.48 E-value=0.017 Score=51.98 Aligned_cols=116 Identities=15% Similarity=0.119 Sum_probs=73.0
Q ss_pred CceEEEEEEECCcEEEEEEeccCChH-HHHHHHHHHHHhccCCCCceeeEeeEEEccCCeEEEEEEeCCCCCHHHHHhcC
Q 048535 125 GNGKVYKGQLLGVEVALKRISLDSEH-GMREFLAEVSSLGRLKHRNLVGLRGWCKKEKESLILIYDYMENGSLDKWIFEC 203 (409)
Q Consensus 125 ~fg~Vy~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~lv~E~~~~gsL~~~l~~~ 203 (409)
+..+.-.+...--+..+|+++.-.-. ...-|..+.+++.+++ .|+++.. +.....-++.|+|-.-..
T Consensus 74 gNsTl~~~kt~iG~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~N---Dn~~~yGvIlE~Cy~~~i------- 141 (308)
T PF07387_consen 74 GNSTLLIGKTKIGPLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKN---DNNYKYGVILERCYKIKI------- 141 (308)
T ss_pred CceEEEEeccccchhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeec---CCCceeEEEEeeccCccc-------
Confidence 34444444444223456666533222 3355778888888775 4677662 334567789999844111
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCc
Q 048535 204 DESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLA 262 (409)
Q Consensus 204 ~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 262 (409)
++ .-.|..+ .++|.-.|++ ..+.+|+|..|+|||-|.+|.+||.|=+.-
T Consensus 142 -----~~---~N~i~ag-i~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~L 190 (308)
T PF07387_consen 142 -----NF---SNFITAG-IKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCL 190 (308)
T ss_pred -----ch---hHHHHHh-HHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhh
Confidence 11 1112222 4667788865 678999999999999999999999997643
No 485
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=96.46 E-value=0.0094 Score=64.86 Aligned_cols=187 Identities=17% Similarity=0.189 Sum_probs=112.2
Q ss_pred HHHHHHHHHHhccCCCCceeeEeeEEEccCC---eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 048535 152 MREFLAEVSSLGRLKHRNLVGLRGWCKKEKE---SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYL 228 (409)
Q Consensus 152 ~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yL 228 (409)
.....-|...+.++.|+|++.+++|-..... ...+..|+|..-++...+. ....++....+.+..+..+||.|+
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q---~v~~i~~~~~r~~~~~~~~GL~~~ 302 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ---SVGSIPLETLRILHQKLLEGLAYL 302 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh---hccccCHHHHHHHHHHHhhhHHHH
Confidence 3344567788899999999999998765322 1234567888888888774 345688889999999999999999
Q ss_pred HhcCCCceeecCCCCC---CeeeCCCCcEEEe--cccCcccccCCc-----eeeecc----cccc--CCCcHHHHHHhhh
Q 048535 229 YEGWESKVLHRDIKAS---NVLLDKKMNARLG--DFGLAKMHHHGQ-----VMSGRR----PIEE--GKRNLVDRMWSLT 292 (409)
Q Consensus 229 H~~~~~~ivHrDlKp~---NILl~~~~~~kl~--DFGla~~~~~~~-----~~~g~~----p~~~--~~~~~~~~vws~~ 292 (409)
| +....|.=+..+ +--.+.++...++ ||+.++...... +..+.. +... .......++|.+.
T Consensus 303 h---~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lg 379 (1351)
T KOG1035|consen 303 H---SLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLG 379 (1351)
T ss_pred H---HhccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHH
Confidence 9 454444444444 3344555666766 888887655432 111111 1111 2223445777763
Q ss_pred ccCcHH-HH--hhHHhhhcCC-CCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 048535 293 ERSELL-SV--LDERLKAKGG-YADEVVEKVLHLGLLCAHPEANSRPTIRQVLKML 344 (409)
Q Consensus 293 ~~~~~~-~~--~~~~l~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 344 (409)
....-. .. +......... .+........+....|+..++++|+++.+++...
T Consensus 380 ll~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 380 LLLLQLSQGEDISEKSAVPVSLLDVLSTSELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred HHHhhhhhcCcccccccchhhhhccccchhhhhhhhhhcchhhhhccchhhhhhch
Confidence 211000 00 0000000000 0111111567778899999999999999998764
No 486
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=96.35 E-value=0.00042 Score=70.46 Aligned_cols=135 Identities=19% Similarity=0.071 Sum_probs=91.8
Q ss_pred cceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCc-eeeEeeEEEccCCeEEEEEEeCCCC-
Q 048535 118 ENVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRN-LVGLRGWCKKEKESLILIYDYMENG- 194 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~~lv~E~~~~g- 194 (409)
-+.+++|+++.+||.+-. .+....+.+... ....-++++|.+++||| .++.++-+.. ....+++++++.+|
T Consensus 247 fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~-E~~~~i~~~i~s~~r 320 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDG-EDYLWIPMRICSTGR 320 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCc-ccccchhhhhhcCCc
Confidence 356889999999998766 333335555432 34456889999999999 6776665554 56788999999887
Q ss_pred CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEecccCcccccCC
Q 048535 195 SLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKMHHHG 268 (409)
Q Consensus 195 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 268 (409)
+-..-.. .....+...+...+.+.-+++|+||| +..-+||| ||+..+ +..|..||+.+..+...
T Consensus 321 s~~~~~~--~se~~~~~~~~~~~~r~et~~l~~l~---~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~ 384 (829)
T KOG0576|consen 321 SSALEMT--VSEIALEQYQFAYPLRKETRPLAELH---SSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRT 384 (829)
T ss_pred cccccCC--hhhHhhhhhhhhhhhhhhcccccccc---cccccCcc----cccccc-cccccccccCCcccCcc
Confidence 2221110 11122344445556677788999999 55568999 887765 57899999988765543
No 487
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.33 E-value=0.075 Score=50.71 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=26.5
Q ss_pred CCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 233 ESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 233 ~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
..+++|+|+.+.||+++. +.+.|.||+.+..
T Consensus 186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~ 216 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYCTI 216 (313)
T ss_pred cCceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence 367999999999999987 5689999997653
No 488
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.10 E-value=0.064 Score=51.37 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=28.9
Q ss_pred CCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 233 ESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 233 ~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
..+++|+|+.+.|+|++.++.+.+.||..+..
T Consensus 195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 45799999999999999999999999998865
No 489
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.93 E-value=0.039 Score=53.45 Aligned_cols=141 Identities=16% Similarity=0.214 Sum_probs=79.3
Q ss_pred ceeecCCceEEEEEEECC-----cEEEEEEeccCChHHHHHHHHHHHHhccCCCCce-eeEeeEEEccCCeEEEEEEeCC
Q 048535 119 NVIGLGGNGKVYKGQLLG-----VEVALKRISLDSEHGMREFLAEVSSLGRLKHRNL-VGLRGWCKKEKESLILIYDYME 192 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~~-----~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~~lv~E~~~ 192 (409)
+.|..|-...+|+....+ ..|.+|........ .-.-.+|..+++.+..-++ .++++++ . .+ +|.+|++
T Consensus 20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~-~IdR~~E~~il~~l~~~gl~P~~l~~~-~-~G---~i~~fi~ 93 (330)
T PLN02421 20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY-VIDRERELQAIKYLSAAGFGAKLLGVF-G-NG---MIQSFIN 93 (330)
T ss_pred EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCe-EechHHHHHHHHHHHhcCCCCceeEEe-C-Cc---Eeehhhc
Confidence 445557777888887653 27888887544321 1123478888888865444 3556554 2 22 5899997
Q ss_pred CCCHHH-----------------HHhcCCC---CCCCCHHHHHHHHHHH----------------------HHHHHHHHh
Q 048535 193 NGSLDK-----------------WIFECDE---SIALSWEQRIKVLKDV----------------------ASGILYLYE 230 (409)
Q Consensus 193 ~gsL~~-----------------~l~~~~~---~~~l~~~~~~~i~~~i----------------------a~gL~yLH~ 230 (409)
+-.|.. .+|...- ...-.|..+.++..++ .+-+..+..
T Consensus 94 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 173 (330)
T PLN02421 94 ARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKE 173 (330)
T ss_pred CCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHH
Confidence 765421 0122110 1111233333332221 111111111
Q ss_pred -----cCCCceeecCCCCCCeeeCC-CCcEEEecccCcccc
Q 048535 231 -----GWESKVLHRDIKASNVLLDK-KMNARLGDFGLAKMH 265 (409)
Q Consensus 231 -----~~~~~ivHrDlKp~NILl~~-~~~~kl~DFGla~~~ 265 (409)
....-.+|.|+-+.|||+++ ++.++++||..|...
T Consensus 174 ~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~n 214 (330)
T PLN02421 174 ITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYS 214 (330)
T ss_pred HhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCC
Confidence 11235899999999999975 578999999988653
No 490
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=95.91 E-value=0.19 Score=49.37 Aligned_cols=137 Identities=15% Similarity=0.189 Sum_probs=84.0
Q ss_pred ccceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccC-CCCceeeEeeEEE------ccCCeEEEEEE
Q 048535 117 EENVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRL-KHRNLVGLRGWCK------KEKESLILIYD 189 (409)
Q Consensus 117 ~~~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~------~~~~~~~lv~E 189 (409)
....||+|+-+.+|-----+..|| |+..........+ -++.|.+. .||-+-.-+.|=. +.....-+.|.
T Consensus 15 ~gr~LgqGgea~ly~l~e~~d~VA-KIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEVRDQVA-KIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred CCccccCCccceeeecchhhchhh-eeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 457799999999995332233333 5544332222122 23334444 5665433122110 11222556677
Q ss_pred eCCCCC-HHHHHhc---CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEeccc
Q 048535 190 YMENGS-LDKWIFE---CDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFG 260 (409)
Q Consensus 190 ~~~~gs-L~~~l~~---~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFG 260 (409)
.+++-. ...++.. ...-....|.-.+++++.+|.+.+-|| ..+.+-+|+.++|+|+++++.+.|.|=.
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsD 162 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSD 162 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEccc
Confidence 666532 2222221 122335789999999999999999999 7899999999999999999888887743
No 491
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.72 E-value=0.21 Score=45.36 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=51.6
Q ss_pred ceeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCC---CceeeEeeEEEccCCeEEEEEEeCCCCC
Q 048535 119 NVIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKH---RNLVGLRGWCKKEKESLILIYDYMENGS 195 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~g~~~~~~~~~~lv~E~~~~gs 195 (409)
+.+.-|.--..|...+...++-||+= .......|..|+.-|..|.- -++.+++.+-.+ ....|+|+||++-|.
T Consensus 22 ~~v~gG~inea~~v~dg~~~~FvK~n---~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~-~~~sylVle~L~~~~ 97 (286)
T COG3001 22 EEVSGGDINEAWRLRDGTDPFFVKCN---QREQLSMFTAEADGLELLARSNTITVPKVIAVGAS-RDHSYLVLEYLPTGP 97 (286)
T ss_pred cccCCccccceeEeecCCcceEEEec---chhhHHHHHHHHHHHHHHHhcCCccccceEEecCC-CCeeEEEEeeccCCC
Confidence 44555555566666666788888874 33445678888887777643 345666665555 678899999999876
Q ss_pred HH
Q 048535 196 LD 197 (409)
Q Consensus 196 L~ 197 (409)
+.
T Consensus 98 ~d 99 (286)
T COG3001 98 LD 99 (286)
T ss_pred CC
Confidence 65
No 492
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.71 E-value=0.046 Score=53.84 Aligned_cols=80 Identities=11% Similarity=0.006 Sum_probs=52.3
Q ss_pred cceeecCCceEEEEEEEC--CcEEEEEEeccC------ChHHHHHHHHHHHHhccCC--CC-ceeeEeeEEEccCCeEEE
Q 048535 118 ENVIGLGGNGKVYKGQLL--GVEVALKRISLD------SEHGMREFLAEVSSLGRLK--HR-NLVGLRGWCKKEKESLIL 186 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~--~~~vAvK~~~~~------~~~~~~~~~~E~~~l~~l~--H~-niv~l~g~~~~~~~~~~l 186 (409)
.+.||.|.-..||++... ++.|+||.-..- -+-..++..-|.++|+... -| .+.+++.+ + .....+
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D-~e~~~~ 110 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--D-SVMNCC 110 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--C-cHHhhH
Confidence 468999999999999985 678999975321 1223456667777777662 34 34556543 2 345678
Q ss_pred EEEeCCCC-CHHHHH
Q 048535 187 IYDYMENG-SLDKWI 200 (409)
Q Consensus 187 v~E~~~~g-sL~~~l 200 (409)
|||+++.. .|++.|
T Consensus 111 vMEdL~~~~ilR~~L 125 (409)
T PRK12396 111 VMEDLSDHTILRTAL 125 (409)
T ss_pred HHHhCcccHHHHHHH
Confidence 99999653 344444
No 493
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.51 E-value=0.061 Score=51.92 Aligned_cols=76 Identities=21% Similarity=0.209 Sum_probs=57.2
Q ss_pred CCeEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCCCCcEEEeccc
Q 048535 181 KESLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDKKMNARLGDFG 260 (409)
Q Consensus 181 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFG 260 (409)
....|++|++- |++|.- ...-.|++.+.++.+-+.-+.-+.. .-+.=|||+.-.||||+ +|++.|+||-
T Consensus 298 ~~y~yl~~kdh-gt~is~-------ik~~~~~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLIDfk 366 (488)
T COG5072 298 TLYLYLHFKDH-GTPISI-------IKADRSEEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLIDFK 366 (488)
T ss_pred ceEEEEEEecC-Cceeee-------eecccHHHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEEee
Confidence 44566777764 445432 1235688899999887777766664 56789999999999999 9999999999
Q ss_pred CcccccC
Q 048535 261 LAKMHHH 267 (409)
Q Consensus 261 la~~~~~ 267 (409)
++|.-..
T Consensus 367 lsRl~~~ 373 (488)
T COG5072 367 LSRLSYS 373 (488)
T ss_pred eeecccC
Confidence 9996443
No 494
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.49 E-value=0.12 Score=49.93 Aligned_cols=141 Identities=17% Similarity=0.216 Sum_probs=80.7
Q ss_pred eeecCCceEEEEEEECCcEEEEEEeccCChHHHHHHHHHHHHhccCCCCce---ee---Eee----EEEccCCeEEEEEE
Q 048535 120 VIGLGGNGKVYKGQLLGVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNL---VG---LRG----WCKKEKESLILIYD 189 (409)
Q Consensus 120 ~lG~G~fg~Vy~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~ni---v~---l~g----~~~~~~~~~~lv~E 189 (409)
.|.+ .-..+|+....+..+++|..... ....+...|...|..|.-.+| ++ +-| .... ....+-+++
T Consensus 33 ~l~s-~eN~~f~~~~~~g~~iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~-~~r~a~lf~ 108 (331)
T COG2334 33 GLNS-EENSNFRVQTEDGRYILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSG-GPRPAALFE 108 (331)
T ss_pred cccc-ccCceEEEEecCCCeEEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccC-CceeEEEEE
Confidence 3444 44578988887555689988765 233455667777776632111 11 111 1111 136788999
Q ss_pred eCCCCCHHH-H--------------HhcC----C----C-CCCCCHHH-------------HHHHHHHHHHHHHHHHhc-
Q 048535 190 YMENGSLDK-W--------------IFEC----D----E-SIALSWEQ-------------RIKVLKDVASGILYLYEG- 231 (409)
Q Consensus 190 ~~~~gsL~~-~--------------l~~~----~----~-~~~l~~~~-------------~~~i~~~ia~gL~yLH~~- 231 (409)
|++|..+.. . +|.. . . .....|.. -.....++...+..+...
T Consensus 109 ~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~ 188 (331)
T COG2334 109 YLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARL 188 (331)
T ss_pred ecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhc
Confidence 999977762 1 1110 0 0 01233431 011233444444444432
Q ss_pred ---CCCc---eeecCCCCCCeeeCCCCc-EEEecccCccc
Q 048535 232 ---WESK---VLHRDIKASNVLLDKKMN-ARLGDFGLAKM 264 (409)
Q Consensus 232 ---~~~~---ivHrDlKp~NILl~~~~~-~kl~DFGla~~ 264 (409)
.... +||+|+-|.||+++.+.. +.+.|||-+..
T Consensus 189 ~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 189 PAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred hhhCCcccceeeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 1233 999999999999999875 89999998753
No 495
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.26 E-value=0.05 Score=53.28 Aligned_cols=62 Identities=21% Similarity=0.202 Sum_probs=45.9
Q ss_pred eEEEEEEeCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeecCCCCCCeeeCC
Q 048535 183 SLILIYDYMENGSLDKWIFECDESIALSWEQRIKVLKDVASGILYLYEGWESKVLHRDIKASNVLLDK 250 (409)
Q Consensus 183 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl~~ 250 (409)
...|+-+|+++-++..++.. ...++....+++.-.++|+.-+-- --+.+|.|+.|.||++--
T Consensus 319 ~~vl~E~~~~Gl~v~~~v~~----~~~pe~l~kkva~lg~~AllkMl~--vDNFvHaDlHPGNVlirf 380 (565)
T KOG1236|consen 319 DLVLVETYERGLSVLRFVKW----KSQPEALVKKVAKLGVNALLKMLI--VDNFVHADLHPGNVLIRF 380 (565)
T ss_pred cceeeeeccccccHHhhhhc----ccChHHHHHHHHHHHHHHHHHHHH--hhcceecccCCCcEEEEe
Confidence 35677789999999999843 234556667777777777755543 468999999999999943
No 496
>PRK06148 hypothetical protein; Provisional
Probab=95.08 E-value=0.49 Score=52.88 Aligned_cols=142 Identities=18% Similarity=0.218 Sum_probs=77.2
Q ss_pred ceeecCCceEEEEEEEC-CcEEEEEEeccCChHHHHHHHHHHHHhccC-------CCCceeeEe-e----EEEccCC--e
Q 048535 119 NVIGLGGNGKVYKGQLL-GVEVALKRISLDSEHGMREFLAEVSSLGRL-------KHRNLVGLR-G----WCKKEKE--S 183 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-------~H~niv~l~-g----~~~~~~~--~ 183 (409)
+.|+ |..-.+|+.... |..+++|+.+..... .....|...|..| .-|.+++-. | ......+ .
T Consensus 31 ~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~~--~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~ 107 (1013)
T PRK06148 31 TPLD-GERDLNFRLTTDDGADYILKIVNPSEPR--VESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR 107 (1013)
T ss_pred eecC-CcCCceEEEEeCCCCeEEEEEcCCccch--hHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence 4454 345678887766 778999999754222 2333444555433 234444322 1 1111112 4
Q ss_pred EEEEEEeCCCCCHHHH-----------------Hhc----CC---CCCCCCHHH-----------------HHHHHHHHH
Q 048535 184 LILIYDYMENGSLDKW-----------------IFE----CD---ESIALSWEQ-----------------RIKVLKDVA 222 (409)
Q Consensus 184 ~~lv~E~~~~gsL~~~-----------------l~~----~~---~~~~l~~~~-----------------~~~i~~~ia 222 (409)
.+-+++|++|..+.+. ++. .. ....+.|.. ...++.++.
T Consensus 108 ~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~~ 187 (1013)
T PRK06148 108 LLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERFL 187 (1013)
T ss_pred EEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHHH
Confidence 6778999999777541 110 00 011233321 112222332
Q ss_pred HHHH-----HHHhcCCCceeecCCCCCCeeeCCCC--cEE-EecccCccc
Q 048535 223 SGIL-----YLYEGWESKVLHRDIKASNVLLDKKM--NAR-LGDFGLAKM 264 (409)
Q Consensus 223 ~gL~-----yLH~~~~~~ivHrDlKp~NILl~~~~--~~k-l~DFGla~~ 264 (409)
+... .+. .....+||.|+.+.|||++.+. ++. |.|||-+..
T Consensus 188 ~~~~~~v~p~l~-~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 188 ARFERNVAPRLA-ALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred HHHHHHHHHHHh-cCCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 2221 122 2256799999999999999875 555 999998754
No 497
>PRK11768 serine/threonine protein kinase; Provisional
Probab=94.66 E-value=1.1 Score=43.31 Aligned_cols=30 Identities=27% Similarity=0.343 Sum_probs=25.2
Q ss_pred CCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 233 ESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 233 ~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
..+++|+|+-+.|||++ + .+.|.||+-+..
T Consensus 195 ~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~ 224 (325)
T PRK11768 195 RLLRLHGDCHPGNILWR-D-GPHFVDLDDARM 224 (325)
T ss_pred CccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence 45789999999999995 4 578999998754
No 498
>PTZ00384 choline kinase; Provisional
Probab=94.54 E-value=0.34 Score=47.89 Aligned_cols=73 Identities=16% Similarity=0.208 Sum_probs=42.8
Q ss_pred ceeecCCceEEEEEEECC---cE-----EEEEEeccCChHHHHHHHHHHHHhccCCCCcee-eEeeEEEccCCeEEEEEE
Q 048535 119 NVIGLGGNGKVYKGQLLG---VE-----VALKRISLDSEHGMREFLAEVSSLGRLKHRNLV-GLRGWCKKEKESLILIYD 189 (409)
Q Consensus 119 ~~lG~G~fg~Vy~~~~~~---~~-----vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~~lv~E 189 (409)
+.|..|-...+|++...+ .. |.+......... .-.-.+|+.+++.+...++- ++++.+.. ++++|
T Consensus 56 ~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l-~IdR~~E~~i~~~Ls~~glgP~l~~~f~~-----g~l~e 129 (383)
T PTZ00384 56 KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSL-VIDNDLQYNIAKLLGDNNFGPKIIGRFGD-----FTIQE 129 (383)
T ss_pred EEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCce-EeccHHHHHHHHHHHhCCCCCeEEEecCC-----EEEEE
Confidence 455567788899887652 12 444432211111 11224688999998665554 45554421 58999
Q ss_pred eCCCCCHH
Q 048535 190 YMENGSLD 197 (409)
Q Consensus 190 ~~~~gsL~ 197 (409)
|++|-.|.
T Consensus 130 fIeGr~l~ 137 (383)
T PTZ00384 130 WVEGNTMG 137 (383)
T ss_pred EeccccCC
Confidence 99987653
No 499
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=94.33 E-value=0.032 Score=35.44 Aligned_cols=31 Identities=19% Similarity=0.145 Sum_probs=17.2
Q ss_pred ccceeEehhhHHHHHHHHHHHHHHhhhhhcc
Q 048535 51 RSKGFILGVSVGGLLIMGCGVVVYMVCLKRK 81 (409)
Q Consensus 51 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~ 81 (409)
.+..+.+|+++..+++++++.+++++++||+
T Consensus 9 ~~vaIa~~VvVPV~vI~~vl~~~l~~~~rR~ 39 (40)
T PF08693_consen 9 NTVAIAVGVVVPVGVIIIVLGAFLFFWYRRK 39 (40)
T ss_pred ceEEEEEEEEechHHHHHHHHHHhheEEecc
Confidence 3455666666666665555545454444443
No 500
>PTZ00296 choline kinase; Provisional
Probab=94.00 E-value=0.42 Score=48.16 Aligned_cols=140 Identities=14% Similarity=0.124 Sum_probs=78.4
Q ss_pred cceeecCCceEEEEEEEC----------CcEEEEEEeccCChHHHHHHHHHHHHhccCCCCcee-eEeeEEEccCCeEEE
Q 048535 118 ENVIGLGGNGKVYKGQLL----------GVEVALKRISLDSEHGMREFLAEVSSLGRLKHRNLV-GLRGWCKKEKESLIL 186 (409)
Q Consensus 118 ~~~lG~G~fg~Vy~~~~~----------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~~l 186 (409)
.+.|..|-.-.+|+.... ++.|.+++.-.....-. .-..|..++..+...+|- ++++.+. + ..
T Consensus 110 i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lI-dR~~E~~v~~~ls~~gi~P~l~~~f~--g---g~ 183 (442)
T PTZ00296 110 VNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELY-NPISEFEVYKTMSKYRIAPQLLNTFS--G---GR 183 (442)
T ss_pred EEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCcccee-CHHHHHHHHHHHHHCCCCCceEEEeC--C---CE
Confidence 355666777788887754 35788887754432222 234677777777544443 4555442 2 35
Q ss_pred EEEeCCCCCHHH--H---------------HhcCCCC---------CCCCHHHHHHHHHHHH------------------
Q 048535 187 IYDYMENGSLDK--W---------------IFECDES---------IALSWEQRIKVLKDVA------------------ 222 (409)
Q Consensus 187 v~E~~~~gsL~~--~---------------l~~~~~~---------~~l~~~~~~~i~~~ia------------------ 222 (409)
|.||+++-.|.. + +|..... .+..|..+.++...+.
T Consensus 184 I~efi~g~~l~~~dl~~~~~~~~iA~~L~~lH~~~~~~~~~~~f~~~p~~f~~i~~~~~~~~~~~~~~~~~~~~~~l~~e 263 (442)
T PTZ00296 184 IEEWLYGDPLRIDDLKNPSILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLSKYKNIEKYQRDIHKYIKE 263 (442)
T ss_pred EEEeeCCccCCHHHcCCHHHHHHHHHHHHHHhcccccccCchhccCCCcHHHHHHHHHHHHHhhccchHhHhhHHHHHHH
Confidence 799999864431 1 1221100 0112333333322211
Q ss_pred --HHHHHHH-------hcCCCceeecCCCCCCeeeCCCCcEEEecccCccc
Q 048535 223 --SGILYLY-------EGWESKVLHRDIKASNVLLDKKMNARLGDFGLAKM 264 (409)
Q Consensus 223 --~gL~yLH-------~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 264 (409)
.-..++. ......++|.|+-+.|||.++++ ++++||-.|..
T Consensus 264 ~~~l~~~l~~~~~l~~~~~~~VfCHNDl~~~NiL~~~~~-l~LIDfEYAg~ 313 (442)
T PTZ00296 264 SEKFIKFMKVYSKSDNLANDIVFCHNDLQENNIINTNKC-LRLIDFEYSGY 313 (442)
T ss_pred HHHHHHHHHhhcccccccCCeeEEeCCCCccceeecCCC-EEEEeeccccc
Confidence 1122332 11135689999999999986554 99999988864
Done!