Query 048538
Match_columns 181
No_of_seqs 150 out of 1597
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 18:09:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048538.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048538hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 7.6E-31 2.6E-35 208.1 19.0 166 14-181 1-197 (201)
2 3kgl_A Cruciferin; 11S SEED gl 99.9 3E-26 1E-30 201.5 15.1 143 32-180 299-443 (466)
3 3ksc_A LEGA class, prolegumin; 99.9 1.5E-25 5.2E-30 198.3 17.0 143 32-180 334-478 (496)
4 1fxz_A Glycinin G1; proglycini 99.9 5.2E-25 1.8E-29 194.7 17.3 144 32-181 314-459 (476)
5 3c3v_A Arachin ARAH3 isoform; 99.9 6.1E-25 2.1E-29 195.1 17.1 144 32-181 348-493 (510)
6 3qac_A 11S globulin SEED stora 99.9 2.2E-25 7.4E-30 196.0 13.9 143 32-180 299-443 (465)
7 2e9q_A 11S globulin subunit be 99.9 2.7E-25 9.2E-30 195.7 14.4 143 32-180 298-442 (459)
8 3fz3_A Prunin; TREE NUT allerg 99.9 1.9E-25 6.6E-30 198.0 12.4 143 32-180 370-514 (531)
9 1dgw_A Canavalin; duplicated s 99.9 1.9E-24 6.4E-29 168.5 14.4 137 33-179 15-166 (178)
10 2d5f_A Glycinin A3B4 subunit; 99.9 1.1E-24 3.9E-29 193.2 13.2 142 32-180 343-484 (493)
11 1fxz_A Glycinin G1; proglycini 99.9 4.9E-24 1.7E-28 188.4 12.0 159 13-180 2-227 (476)
12 2e9q_A 11S globulin subunit be 99.9 5.4E-24 1.8E-28 187.4 11.9 156 17-180 21-235 (459)
13 3qac_A 11S globulin SEED stora 99.9 8.7E-24 3E-28 185.8 12.6 159 14-180 5-237 (465)
14 2cav_A Protein (canavalin); vi 99.9 3.1E-23 1.1E-27 182.1 15.7 138 34-179 61-211 (445)
15 1uij_A Beta subunit of beta co 99.9 2.7E-23 9.4E-28 181.1 14.3 143 33-180 226-383 (416)
16 2d5f_A Glycinin A3B4 subunit; 99.9 2.2E-23 7.5E-28 184.9 12.3 157 18-180 4-230 (493)
17 3c3v_A Arachin ARAH3 isoform; 99.9 2.2E-23 7.4E-28 185.2 12.3 162 13-180 2-269 (510)
18 2cav_A Protein (canavalin); vi 99.9 1.2E-22 4E-27 178.4 14.3 143 33-180 258-412 (445)
19 3ksc_A LEGA class, prolegumin; 99.9 4.5E-23 1.5E-27 182.5 10.9 155 16-178 3-214 (496)
20 2ea7_A 7S globulin-1; beta bar 99.9 1.4E-22 5E-27 177.4 13.9 143 33-180 243-399 (434)
21 3s7i_A Allergen ARA H 1, clone 99.9 2.4E-22 8.2E-27 175.1 13.3 140 34-180 240-408 (418)
22 3kgl_A Cruciferin; 11S SEED gl 99.9 1.4E-22 4.8E-27 178.2 11.9 156 19-180 3-245 (466)
23 2ea7_A 7S globulin-1; beta bar 99.9 8.4E-22 2.9E-26 172.5 14.6 137 34-178 36-185 (434)
24 1uij_A Beta subunit of beta co 99.9 7.9E-22 2.7E-26 171.9 13.0 138 33-178 23-173 (416)
25 3fz3_A Prunin; TREE NUT allerg 99.9 4.3E-22 1.5E-26 176.6 11.3 158 16-179 5-296 (531)
26 2vqa_A SLL1358 protein, MNCA; 99.9 4.2E-21 1.4E-25 163.2 17.0 138 34-180 214-351 (361)
27 2phl_A Phaseolin; plant SEED s 99.9 1.8E-21 6.2E-26 168.6 14.1 136 34-180 223-371 (397)
28 2phl_A Phaseolin; plant SEED s 99.9 2E-21 6.8E-26 168.3 12.7 139 32-178 25-181 (397)
29 2vqa_A SLL1358 protein, MNCA; 99.8 5.3E-20 1.8E-24 156.4 15.3 137 34-179 32-171 (361)
30 3s7i_A Allergen ARA H 1, clone 99.8 6E-20 2.1E-24 160.0 13.7 136 34-179 19-169 (418)
31 1j58_A YVRK protein; cupin, de 99.8 8.5E-19 2.9E-23 150.4 15.6 138 34-180 237-374 (385)
32 1j58_A YVRK protein; cupin, de 99.7 7.9E-18 2.7E-22 144.3 10.7 135 35-179 60-196 (385)
33 3h8u_A Uncharacterized conserv 99.6 1E-15 3.5E-20 111.1 10.3 83 55-144 38-120 (125)
34 1lr5_A Auxin binding protein 1 99.6 4E-15 1.4E-19 113.2 11.6 88 55-143 40-129 (163)
35 2fqp_A Hypothetical protein BP 99.6 2E-15 6.8E-20 105.6 8.9 77 55-137 17-93 (97)
36 3l2h_A Putative sugar phosphat 99.6 5.8E-15 2E-19 112.1 11.8 83 55-145 45-129 (162)
37 3ibm_A Cupin 2, conserved barr 99.6 5.3E-14 1.8E-18 108.1 15.5 78 54-140 54-132 (167)
38 1v70_A Probable antibiotics sy 99.6 1.2E-14 3.9E-19 101.0 10.1 77 55-139 27-103 (105)
39 3es1_A Cupin 2, conserved barr 99.6 9.2E-15 3.1E-19 113.3 9.9 81 54-143 77-157 (172)
40 3i7d_A Sugar phosphate isomera 99.6 2.5E-14 8.6E-19 109.4 11.9 83 55-145 42-127 (163)
41 2oa2_A BH2720 protein; 1017534 99.6 5.1E-14 1.7E-18 105.6 13.0 84 55-140 42-125 (148)
42 3ht1_A REMF protein; cupin fol 99.6 1.8E-14 6.2E-19 106.5 10.1 80 55-143 38-119 (145)
43 3lag_A Uncharacterized protein 99.6 3.3E-15 1.1E-19 105.4 5.3 77 55-136 16-92 (98)
44 2bnm_A Epoxidase; oxidoreducta 99.5 6.9E-14 2.4E-18 109.1 12.1 79 54-137 115-197 (198)
45 2gu9_A Tetracenomycin polyketi 99.5 6.5E-14 2.2E-18 98.8 10.6 79 54-140 19-99 (113)
46 3kgz_A Cupin 2 conserved barre 99.5 4.5E-14 1.5E-18 107.6 9.9 77 55-140 43-119 (156)
47 3fjs_A Uncharacterized protein 99.5 3.6E-14 1.2E-18 102.3 8.6 71 55-134 35-105 (114)
48 4e2g_A Cupin 2 conserved barre 99.5 2.5E-14 8.5E-19 103.7 7.7 76 55-140 40-115 (126)
49 2b8m_A Hypothetical protein MJ 99.5 1.2E-13 4.2E-18 99.0 10.8 75 55-138 26-101 (117)
50 2f4p_A Hypothetical protein TM 99.5 2.8E-13 9.4E-18 101.8 13.1 77 55-140 47-124 (147)
51 3jzv_A Uncharacterized protein 99.5 6.1E-14 2.1E-18 107.9 9.5 77 55-140 52-128 (166)
52 1x82_A Glucose-6-phosphate iso 99.5 6.9E-13 2.4E-17 103.9 15.5 83 55-140 66-156 (190)
53 2pfw_A Cupin 2, conserved barr 99.5 2.7E-13 9.1E-18 96.7 11.2 76 55-141 33-108 (116)
54 1o4t_A Putative oxalate decarb 99.5 1.2E-13 4.1E-18 101.9 9.3 76 55-138 56-131 (133)
55 1vj2_A Novel manganese-contain 99.5 1.8E-13 6E-18 99.9 9.3 75 55-138 47-121 (126)
56 2xlg_A SLL1785 protein, CUCA; 99.5 1.3E-13 4.6E-18 111.9 9.1 83 55-137 42-137 (239)
57 2vpv_A Protein MIF2, MIF2P; nu 99.5 1.9E-13 6.6E-18 105.2 9.4 76 55-138 87-163 (166)
58 2ozi_A Hypothetical protein RP 99.5 6.4E-14 2.2E-18 98.9 6.0 78 55-137 16-93 (98)
59 4i4a_A Similar to unknown prot 99.5 5.1E-13 1.8E-17 97.0 10.6 75 55-138 33-107 (128)
60 1y9q_A Transcriptional regulat 99.5 6.7E-13 2.3E-17 103.1 11.8 75 55-139 103-179 (192)
61 1yhf_A Hypothetical protein SP 99.4 5.4E-13 1.9E-17 95.0 9.7 74 55-139 39-112 (115)
62 3h7j_A Bacilysin biosynthesis 99.4 2.9E-13 9.8E-18 109.5 9.0 81 55-144 144-225 (243)
63 1sef_A Conserved hypothetical 99.4 4.9E-12 1.7E-16 104.0 14.5 75 55-138 181-257 (274)
64 3cew_A Uncharacterized cupin p 99.4 1.3E-12 4.4E-17 94.8 9.8 77 55-140 25-103 (125)
65 2o8q_A Hypothetical protein; c 99.4 9.4E-13 3.2E-17 96.5 9.0 77 58-142 45-121 (134)
66 2ozj_A Cupin 2, conserved barr 99.4 1.8E-12 6.2E-17 92.4 10.3 73 55-138 37-109 (114)
67 1rc6_A Hypothetical protein YL 99.4 7.7E-13 2.6E-17 108.0 9.3 76 55-138 178-254 (261)
68 3lwc_A Uncharacterized protein 99.4 1.8E-12 6.1E-17 94.4 8.4 74 55-139 39-112 (119)
69 1sfn_A Conserved hypothetical 99.4 1.9E-11 6.5E-16 99.1 15.4 77 53-138 162-239 (246)
70 2q30_A Uncharacterized protein 99.4 3.8E-12 1.3E-16 89.5 9.5 75 55-138 32-107 (110)
71 1sq4_A GLXB, glyoxylate-induce 99.3 2.6E-12 9E-17 106.2 8.9 75 55-138 67-143 (278)
72 3h7j_A Bacilysin biosynthesis 99.3 2.7E-12 9.3E-17 103.8 8.2 73 57-138 35-108 (243)
73 2d40_A Z3393, putative gentisa 99.3 3.2E-12 1.1E-16 109.1 8.9 76 54-138 98-174 (354)
74 1y3t_A Hypothetical protein YX 99.3 7.2E-12 2.5E-16 104.7 10.3 78 55-141 45-122 (337)
75 4b29_A Dimethylsulfoniopropion 99.3 6.6E-12 2.3E-16 100.1 9.3 80 52-140 128-207 (217)
76 1dgw_X Canavalin; duplicated s 99.3 2E-12 6.9E-17 87.9 5.4 62 34-96 15-76 (79)
77 2opk_A Hypothetical protein; p 99.3 1.5E-11 5.3E-16 88.2 10.3 74 55-138 30-109 (112)
78 4h7l_A Uncharacterized protein 99.3 2.5E-11 8.4E-16 92.5 11.9 93 27-140 23-119 (157)
79 4e2q_A Ureidoglycine aminohydr 99.3 3.8E-11 1.3E-15 98.8 13.6 76 53-137 183-259 (266)
80 2pyt_A Ethanolamine utilizatio 99.3 5.2E-12 1.8E-16 93.7 7.5 72 55-139 56-127 (133)
81 1rc6_A Hypothetical protein YL 99.3 5.6E-12 1.9E-16 102.8 8.1 76 55-138 58-134 (261)
82 1y3t_A Hypothetical protein YX 99.3 4.1E-11 1.4E-15 100.1 12.2 75 58-141 219-294 (337)
83 3bu7_A Gentisate 1,2-dioxygena 99.3 7E-11 2.4E-15 102.1 13.9 94 36-138 274-368 (394)
84 3rns_A Cupin 2 conserved barre 99.3 1.3E-11 4.6E-16 98.8 8.8 74 55-138 152-225 (227)
85 4e2q_A Ureidoglycine aminohydr 99.3 2.1E-11 7.2E-16 100.3 10.1 74 55-138 69-142 (266)
86 1sef_A Conserved hypothetical 99.3 9.9E-12 3.4E-16 102.2 8.0 76 55-138 61-137 (274)
87 1juh_A Quercetin 2,3-dioxygena 99.3 6E-11 2E-15 100.9 12.9 82 55-141 47-131 (350)
88 2i45_A Hypothetical protein; n 99.2 1.3E-11 4.6E-16 87.0 7.1 69 58-136 30-98 (107)
89 4axo_A EUTQ, ethanolamine util 99.2 3.5E-11 1.2E-15 91.2 9.7 74 55-141 65-138 (151)
90 3rns_A Cupin 2 conserved barre 99.2 3E-11 1E-15 96.7 9.7 74 55-139 36-109 (227)
91 1sq4_A GLXB, glyoxylate-induce 99.2 4.2E-11 1.4E-15 98.9 10.3 77 53-138 188-265 (278)
92 2q1z_B Anti-sigma factor CHRR, 99.2 3.2E-11 1.1E-15 94.9 8.0 70 56-138 125-194 (195)
93 3nw4_A Gentisate 1,2-dioxygena 99.2 3.1E-11 1E-15 103.4 8.4 91 40-138 85-177 (368)
94 3bu7_A Gentisate 1,2-dioxygena 99.2 9E-11 3.1E-15 101.4 11.3 78 53-138 120-198 (394)
95 3ebr_A Uncharacterized RMLC-li 99.2 2E-10 6.9E-15 87.7 11.0 103 22-140 10-117 (159)
96 2d40_A Z3393, putative gentisa 99.2 1.9E-10 6.4E-15 98.1 11.5 89 37-138 250-339 (354)
97 3d82_A Cupin 2, conserved barr 99.2 1.6E-10 5.4E-15 80.0 8.6 60 67-136 40-99 (102)
98 1o5u_A Novel thermotoga mariti 99.1 1.4E-10 4.7E-15 82.1 5.8 64 60-133 35-98 (101)
99 1vr3_A Acireductone dioxygenas 99.1 2E-09 6.9E-14 84.4 12.7 80 57-140 75-164 (191)
100 1sfn_A Conserved hypothetical 99.1 6.9E-10 2.4E-14 89.9 9.8 71 55-138 49-119 (246)
101 3cjx_A Protein of unknown func 99.1 2E-09 6.8E-14 82.7 11.7 75 55-139 42-118 (165)
102 2o1q_A Putative acetyl/propion 99.0 4.9E-10 1.7E-14 84.0 6.3 91 36-140 29-120 (145)
103 3bcw_A Uncharacterized protein 99.0 4.5E-10 1.5E-14 82.2 5.7 67 55-130 48-114 (123)
104 1yfu_A 3-hydroxyanthranilate-3 98.9 1.3E-08 4.5E-13 78.2 11.6 67 55-127 35-101 (174)
105 1dgw_Y Canavalin; duplicated s 98.9 1.7E-08 5.7E-13 70.4 10.2 72 104-180 7-82 (93)
106 1juh_A Quercetin 2,3-dioxygena 98.9 1.2E-08 4.1E-13 86.7 11.4 76 55-139 248-326 (350)
107 3o14_A Anti-ecfsigma factor, C 98.8 7.1E-08 2.4E-12 77.3 13.2 100 20-138 10-110 (223)
108 1zrr_A E-2/E-2' protein; nicke 98.8 2.8E-09 9.7E-14 82.8 4.7 79 57-140 72-159 (179)
109 3bal_A Acetylacetone-cleaving 98.8 1.3E-08 4.3E-13 77.2 8.1 110 17-139 7-121 (153)
110 3eqe_A Putative cystein deoxyg 98.8 9.3E-08 3.2E-12 73.7 12.9 86 55-141 68-155 (171)
111 3st7_A Capsular polysaccharide 98.8 3.2E-08 1.1E-12 83.2 10.8 78 57-138 273-354 (369)
112 3nw4_A Gentisate 1,2-dioxygena 98.8 6.9E-08 2.4E-12 82.6 12.5 73 55-138 278-350 (368)
113 2y0o_A Probable D-lyxose ketol 98.8 4.7E-08 1.6E-12 75.6 9.5 82 56-138 53-153 (175)
114 2arc_A ARAC, arabinose operon 98.7 1.2E-07 4.2E-12 70.3 10.9 74 56-138 13-92 (164)
115 1zvf_A 3-hydroxyanthranilate 3 98.7 1.4E-07 4.8E-12 72.5 9.5 63 63-126 41-103 (176)
116 2gm6_A Cysteine dioxygenase ty 98.6 8.5E-07 2.9E-11 70.3 12.4 85 55-140 78-168 (208)
117 3d0j_A Uncharacterized protein 98.5 3.9E-07 1.3E-11 67.7 8.0 81 56-138 25-109 (140)
118 2qnk_A 3-hydroxyanthranilate 3 98.5 5.3E-07 1.8E-11 74.1 9.4 74 55-136 31-104 (286)
119 3eln_A Cysteine dioxygenase ty 98.4 9.1E-06 3.1E-10 64.0 13.1 88 55-142 69-162 (200)
120 2pa7_A DTDP-6-deoxy-3,4-keto-h 98.3 8E-06 2.7E-10 60.9 11.9 97 34-138 15-113 (141)
121 3es4_A Uncharacterized protein 98.2 1.5E-05 5.1E-10 57.6 11.0 64 55-127 41-104 (116)
122 3ejk_A DTDP sugar isomerase; Y 98.2 2.2E-05 7.5E-10 60.5 11.8 119 16-138 17-141 (174)
123 3uss_A Putative uncharacterize 98.1 7.8E-05 2.7E-09 59.1 12.7 85 55-140 72-162 (211)
124 3myx_A Uncharacterized protein 98.0 3.1E-05 1E-09 62.5 9.1 72 55-138 46-117 (238)
125 3gbg_A TCP pilus virulence reg 97.9 3.8E-05 1.3E-09 61.9 8.8 75 55-136 6-84 (276)
126 3myx_A Uncharacterized protein 97.9 6.8E-05 2.3E-09 60.5 9.9 64 55-127 166-229 (238)
127 1yud_A Hypothetical protein SO 97.9 0.00048 1.7E-08 52.7 13.7 131 34-178 26-165 (170)
128 3o14_A Anti-ecfsigma factor, C 97.7 0.00043 1.5E-08 55.2 11.2 77 36-134 133-209 (223)
129 2vec_A YHAK, pirin-like protei 97.6 0.00031 1E-08 57.2 8.9 74 58-139 66-143 (256)
130 1tq5_A Protein YHHW; bicupin, 97.4 0.0011 3.7E-08 53.4 9.5 74 58-138 43-119 (242)
131 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 97.2 0.0056 1.9E-07 47.4 11.2 78 60-138 52-136 (185)
132 2ixk_A DTDP-4-dehydrorhamnose 97.1 0.0067 2.3E-07 46.9 11.2 78 60-138 53-137 (184)
133 1vrb_A Putative asparaginyl hy 97.1 0.0053 1.8E-07 51.7 11.2 76 61-137 145-252 (342)
134 1wlt_A 176AA long hypothetical 97.0 0.0076 2.6E-07 47.1 10.6 81 57-138 66-154 (196)
135 4gjz_A Lysine-specific demethy 97.0 0.0024 8.1E-08 49.7 7.6 67 61-128 128-226 (235)
136 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.9 0.0063 2.1E-07 47.6 9.5 78 57-138 61-143 (197)
137 1dzr_A DTDP-4-dehydrorhamnose 96.9 0.013 4.4E-07 45.2 11.1 78 60-138 51-136 (183)
138 2p17_A Pirin-like protein; GK1 96.9 0.01 3.4E-07 48.7 11.0 96 34-138 18-116 (277)
139 3kmh_A D-lyxose isomerase; cup 96.9 0.034 1.1E-06 44.6 13.4 82 57-138 107-208 (246)
140 1oi6_A PCZA361.16; epimerase, 96.8 0.014 4.8E-07 45.8 11.0 80 58-138 49-136 (205)
141 2qdr_A Uncharacterized protein 96.8 0.057 2E-06 43.9 14.5 73 55-140 90-163 (303)
142 2c0z_A NOVW; isomerase, epimer 96.8 0.013 4.4E-07 46.4 10.4 78 60-138 59-144 (216)
143 1upi_A DTDP-4-dehydrorhamnose 96.7 0.019 6.4E-07 45.8 11.0 80 58-138 68-155 (225)
144 2qnk_A 3-hydroxyanthranilate 3 96.7 0.004 1.4E-07 51.1 7.1 64 63-138 214-277 (286)
145 3bb6_A Uncharacterized protein 96.7 0.014 4.8E-07 42.4 9.2 71 65-138 23-100 (127)
146 3ryk_A DTDP-4-dehydrorhamnose 96.6 0.023 7.9E-07 44.6 10.8 75 63-138 77-159 (205)
147 1j1l_A Pirin; beta sandwich, c 96.6 0.017 5.9E-07 47.6 10.6 74 57-138 41-118 (290)
148 3d8c_A Hypoxia-inducible facto 96.5 0.012 4.1E-07 49.6 9.2 74 64-138 191-297 (349)
149 3al5_A HTYW5, JMJC domain-cont 96.4 0.015 5.1E-07 48.7 8.8 69 64-135 175-270 (338)
150 4diq_A Lysine-specific demethy 96.2 0.064 2.2E-06 47.3 12.3 73 64-137 172-262 (489)
151 2xdv_A MYC-induced nuclear ant 96.1 0.074 2.5E-06 46.3 12.1 63 64-127 147-223 (442)
152 2qjv_A Uncharacterized IOLB-li 96.1 0.052 1.8E-06 44.3 10.5 94 40-140 140-248 (270)
153 4hn1_A Putative 3-epimerase in 96.1 0.088 3E-06 41.2 11.1 75 63-138 51-133 (201)
154 3m3i_A Putative uncharacterize 95.8 0.33 1.1E-05 38.5 13.4 133 34-179 33-211 (225)
155 3loi_A Putative uncharacterize 95.6 0.53 1.8E-05 35.8 13.9 128 34-178 24-168 (172)
156 1eyb_A Homogentisate 1,2-dioxy 95.6 0.08 2.7E-06 46.3 9.9 56 71-136 172-227 (471)
157 1e5r_A Proline oxidase; oxidor 95.5 0.013 4.3E-07 48.5 4.3 110 57-168 92-217 (290)
158 2oyz_A UPF0345 protein VPA0057 95.1 0.11 3.9E-06 35.7 7.4 63 63-136 30-92 (94)
159 2yu1_A JMJC domain-containing 94.8 0.073 2.5E-06 46.5 7.4 67 63-129 203-292 (451)
160 3k2o_A Bifunctional arginine d 94.4 0.16 5.6E-06 42.5 8.5 65 64-128 180-281 (336)
161 1xru_A 4-deoxy-L-threo-5-hexos 94.3 0.44 1.5E-05 39.0 10.5 82 55-141 179-266 (282)
162 3hqx_A UPF0345 protein aciad03 94.0 0.28 9.5E-06 34.7 7.6 67 62-137 43-109 (111)
163 3rcq_A Aspartyl/asparaginyl be 94.0 0.18 6.2E-06 39.2 7.3 70 57-134 103-177 (197)
164 3kv5_D JMJC domain-containing 93.8 0.096 3.3E-06 46.2 5.9 66 63-128 273-361 (488)
165 3kv4_A PHD finger protein 8; e 93.6 0.18 6.1E-06 44.0 7.3 66 63-128 238-326 (447)
166 3dl3_A Tellurite resistance pr 93.3 0.5 1.7E-05 33.8 8.1 68 70-138 30-98 (119)
167 1tq5_A Protein YHHW; bicupin, 93.2 0.81 2.8E-05 36.5 10.0 76 55-144 159-234 (242)
168 1ywk_A 4-deoxy-L-threo-5-hexos 93.0 0.36 1.2E-05 39.7 7.9 82 55-141 179-266 (289)
169 3k3o_A PHF8, PHD finger protei 92.9 0.13 4.5E-06 43.8 5.3 65 63-127 154-241 (371)
170 1znp_A Hypothetical protein AT 92.8 2.2 7.6E-05 31.8 12.9 110 34-150 19-138 (154)
171 3kv9_A JMJC domain-containing 92.4 0.21 7.1E-06 42.9 5.9 65 63-127 182-269 (397)
172 1pmi_A PMI, phosphomannose iso 92.2 0.56 1.9E-05 40.7 8.5 74 55-135 356-435 (440)
173 3pua_A GRC5, PHD finger protei 92.2 0.26 8.8E-06 42.3 6.2 65 63-127 181-268 (392)
174 1j1l_A Pirin; beta sandwich, c 91.9 3.1 0.00011 34.0 12.1 100 55-167 168-268 (290)
175 3eo6_A Protein of unknown func 91.4 0.42 1.4E-05 33.5 5.5 55 63-126 43-97 (106)
176 2vec_A YHAK, pirin-like protei 90.8 1.6 5.5E-05 35.1 9.2 71 55-135 181-251 (256)
177 2ypd_A Probable JMJC domain-co 90.5 0.31 1.1E-05 41.6 4.9 37 102-138 292-328 (392)
178 3pur_A Lysine-specific demethy 89.8 0.29 9.8E-06 43.5 4.3 65 63-127 303-390 (528)
179 1qwr_A Mannose-6-phosphate iso 89.5 0.5 1.7E-05 39.2 5.4 55 55-120 250-304 (319)
180 2wfp_A Mannose-6-phosphate iso 89.2 0.51 1.8E-05 40.3 5.3 54 55-119 323-376 (394)
181 1zx5_A Mannosephosphate isomer 88.0 0.36 1.2E-05 39.8 3.4 48 77-124 117-179 (300)
182 2qjv_A Uncharacterized IOLB-li 87.8 3.6 0.00012 33.4 9.2 72 55-138 28-110 (270)
183 3g7d_A PHPD; non heme Fe(II) d 87.7 9.7 0.00033 32.1 11.8 94 40-144 320-413 (443)
184 2p17_A Pirin-like protein; GK1 87.3 1.9 6.4E-05 35.0 7.4 72 55-138 166-242 (277)
185 1qwr_A Mannose-6-phosphate iso 87.1 0.42 1.5E-05 39.6 3.4 49 76-124 116-179 (319)
186 3mdp_A Cyclic nucleotide-bindi 86.9 1.2 4E-05 30.7 5.3 54 58-114 29-85 (142)
187 2pqq_A Putative transcriptiona 86.3 1.9 6.5E-05 29.8 6.1 53 59-114 29-81 (149)
188 3idb_B CAMP-dependent protein 86.2 2.4 8.3E-05 30.1 6.8 52 58-113 61-112 (161)
189 1ft9_A Carbon monoxide oxidati 86.1 4.3 0.00015 30.4 8.5 113 59-180 24-186 (222)
190 1xe7_A YML079WP, hypothetical 85.4 11 0.00038 29.2 13.4 128 34-177 42-197 (203)
191 2fmy_A COOA, carbon monoxide o 85.2 5.4 0.00019 29.7 8.7 112 59-181 28-191 (220)
192 2wfp_A Mannose-6-phosphate iso 84.2 0.75 2.6E-05 39.3 3.6 22 103-124 240-261 (394)
193 3dn7_A Cyclic nucleotide bindi 83.7 4.1 0.00014 29.7 7.2 114 59-180 31-191 (194)
194 4ev0_A Transcription regulator 83.1 3.8 0.00013 30.3 6.9 117 59-180 23-186 (216)
195 3dv8_A Transcriptional regulat 82.9 3.2 0.00011 30.8 6.4 117 59-180 27-192 (220)
196 2oz6_A Virulence factor regula 82.9 4.5 0.00015 29.7 7.2 53 60-115 15-67 (207)
197 3fx3_A Cyclic nucleotide-bindi 82.6 4 0.00014 30.8 7.0 115 59-180 35-201 (237)
198 3e97_A Transcriptional regulat 82.2 4.6 0.00016 30.3 7.1 54 58-114 29-82 (231)
199 2z69_A DNR protein; beta barre 82.0 1.7 5.9E-05 30.3 4.4 53 58-113 35-87 (154)
200 2rg4_A Uncharacterized protein 82.0 3.1 0.00011 32.3 6.1 68 61-130 108-197 (216)
201 3gyd_A CNMP-BD protein, cyclic 81.9 3.9 0.00013 30.1 6.5 53 58-113 62-114 (187)
202 3ryp_A Catabolite gene activat 81.5 5.4 0.00018 29.3 7.2 114 59-180 20-190 (210)
203 3iwz_A CAP-like, catabolite ac 81.3 5.4 0.00018 29.8 7.2 73 59-136 35-113 (230)
204 3d0s_A Transcriptional regulat 81.3 5.4 0.00018 29.8 7.2 114 60-180 31-200 (227)
205 1zx5_A Mannosephosphate isomer 80.8 2.2 7.5E-05 35.0 5.1 54 55-121 229-283 (300)
206 1zyb_A Transcription regulator 80.6 4.1 0.00014 30.8 6.4 118 58-180 43-209 (232)
207 1pmi_A PMI, phosphomannose iso 80.5 1.2 4.2E-05 38.5 3.6 22 104-125 267-288 (440)
208 3b02_A Transcriptional regulat 80.5 4.3 0.00015 29.8 6.3 114 62-181 3-163 (195)
209 2gau_A Transcriptional regulat 79.1 3.9 0.00013 30.8 5.8 118 58-180 33-203 (232)
210 3la7_A Global nitrogen regulat 78.5 6.2 0.00021 30.1 6.9 115 59-180 44-216 (243)
211 1o5l_A Transcriptional regulat 78.1 5.2 0.00018 29.8 6.2 119 58-181 22-188 (213)
212 1ywk_A 4-deoxy-L-threo-5-hexos 78.0 9 0.00031 31.3 7.8 70 61-138 62-134 (289)
213 3kcc_A Catabolite gene activat 78.0 7.1 0.00024 30.2 7.1 117 59-180 70-240 (260)
214 2zcw_A TTHA1359, transcription 77.1 5.6 0.00019 29.2 6.1 113 60-180 7-169 (202)
215 3e6c_C CPRK, cyclic nucleotide 76.8 7.5 0.00026 29.6 6.9 118 58-180 32-200 (250)
216 3pna_A CAMP-dependent protein 76.1 8 0.00027 27.1 6.4 48 58-113 61-108 (154)
217 4f8a_A Potassium voltage-gated 75.9 7.3 0.00025 27.1 6.1 49 59-115 51-99 (160)
218 2bgc_A PRFA; bacterial infecti 75.9 22 0.00076 26.7 9.4 72 60-136 20-98 (238)
219 3bpz_A Potassium/sodium hyperp 74.6 3.5 0.00012 30.6 4.3 47 59-113 96-142 (202)
220 3ocp_A PRKG1 protein; serine/t 73.8 10 0.00034 25.9 6.3 47 59-113 47-93 (139)
221 2ptm_A Hyperpolarization-activ 72.4 6.3 0.00021 29.0 5.2 49 58-113 94-142 (198)
222 3tnp_B CAMP-dependent protein 72.0 10 0.00035 31.9 7.0 53 58-114 168-220 (416)
223 4ava_A Lysine acetyltransferas 68.3 11 0.00038 30.0 6.2 51 59-113 37-87 (333)
224 2xxz_A Lysine-specific demethy 67.8 6.1 0.00021 33.0 4.5 27 102-128 278-304 (332)
225 3of1_A CAMP-dependent protein 66.6 6.6 0.00023 29.5 4.3 48 59-114 31-78 (246)
226 3ukn_A Novel protein similar t 65.9 10 0.00035 28.1 5.3 50 58-115 98-147 (212)
227 2d93_A RAP guanine nucleotide 65.6 5.4 0.00019 27.2 3.4 48 58-113 39-87 (134)
228 1wy3_A Villin; structural prot 65.0 4.8 0.00016 22.3 2.3 22 158-179 1-22 (35)
229 1vp6_A CNBD, cyclic-nucleotide 64.9 7.8 0.00027 26.2 4.1 45 59-113 35-79 (138)
230 3g7d_A PHPD; non heme Fe(II) d 64.4 22 0.00076 29.9 7.2 75 103-178 155-264 (443)
231 1und_A Advillin, P92; actin bi 64.3 5.4 0.00019 22.4 2.5 22 158-179 3-24 (37)
232 3dkw_A DNR protein; CRP-FNR, H 63.7 3.5 0.00012 30.8 2.2 116 59-181 33-202 (227)
233 2qcs_B CAMP-dependent protein 63.1 21 0.00072 27.6 6.8 54 58-113 180-233 (291)
234 2qcs_B CAMP-dependent protein 62.4 17 0.00058 28.1 6.1 49 58-114 62-110 (291)
235 3of1_A CAMP-dependent protein 60.9 16 0.00056 27.2 5.6 48 59-113 149-196 (246)
236 1yll_A PA5104, conserved hypot 60.9 15 0.00053 28.2 5.4 51 80-137 143-196 (200)
237 3shr_A CGMP-dependent protein 60.5 15 0.0005 28.7 5.4 53 59-113 181-233 (299)
238 1wgp_A Probable cyclic nucleot 58.9 2 6.7E-05 29.5 -0.0 34 77-113 47-82 (137)
239 3shr_A CGMP-dependent protein 58.9 18 0.00061 28.2 5.7 49 58-114 62-110 (299)
240 3esg_A HUTD, putative uncharac 57.6 61 0.0021 24.7 11.8 103 28-140 18-122 (193)
241 3avr_A Lysine-specific demethy 56.9 12 0.0004 33.3 4.5 26 103-128 338-363 (531)
242 1xru_A 4-deoxy-L-threo-5-hexos 54.6 20 0.0007 29.1 5.3 54 77-138 78-134 (282)
243 2qdr_A Uncharacterized protein 54.0 40 0.0014 27.4 6.8 64 55-139 216-287 (303)
244 4ask_A Lysine-specific demethy 53.9 14 0.00049 32.5 4.5 85 40-128 223-338 (510)
245 1o7f_A CAMP-dependent RAP1 gua 53.5 26 0.00089 29.3 6.1 55 58-115 65-121 (469)
246 4f7z_A RAP guanine nucleotide 51.7 30 0.001 32.4 6.8 56 58-114 65-120 (999)
247 1o7f_A CAMP-dependent RAP1 gua 47.9 27 0.00091 29.2 5.3 46 61-113 364-409 (469)
248 1xsq_A Ureidoglycolate hydrola 47.5 41 0.0014 25.0 5.7 79 58-136 54-139 (168)
249 2bdr_A Ureidoglycolate hydrola 46.4 49 0.0017 24.8 6.0 68 69-136 71-141 (175)
250 1tc3_C Protein (TC3 transposas 43.8 28 0.00096 18.7 3.5 24 158-181 22-45 (51)
251 4din_B CAMP-dependent protein 42.3 24 0.00081 29.1 4.1 49 58-114 153-201 (381)
252 3tnp_B CAMP-dependent protein 41.4 37 0.0013 28.4 5.2 54 59-113 291-348 (416)
253 1qzp_A Dematin; villin headpie 39.0 18 0.00062 23.0 2.2 23 157-179 33-55 (68)
254 2opw_A Phyhd1 protein; double- 35.3 49 0.0017 25.8 4.8 27 103-129 228-255 (291)
255 1yu8_X Villin; alpha helix, 3- 34.5 19 0.00067 22.8 1.8 22 157-178 32-53 (67)
256 2a1x_A Phytanoyl-COA dioxygena 34.4 54 0.0019 25.9 4.9 28 103-130 216-244 (308)
257 4din_B CAMP-dependent protein 34.2 66 0.0023 26.3 5.6 50 61-113 274-324 (381)
258 2k6m_S Supervillin; SVHP, HP, 32.0 19 0.00063 22.9 1.4 22 157-178 32-53 (67)
259 1s4c_A Protein HI0227; double- 31.8 1.3E+02 0.0044 21.5 6.2 57 69-125 60-134 (155)
260 2fct_A Syringomycin biosynthes 29.8 69 0.0023 25.3 4.8 28 103-130 220-250 (313)
261 3cf6_E RAP guanine nucleotide 29.7 70 0.0024 28.9 5.3 48 60-114 58-105 (694)
262 3nnf_A CURA; non-HAEM Fe(II)/a 29.1 52 0.0018 27.3 3.9 21 104-124 235-255 (344)
263 4f7z_A RAP guanine nucleotide 27.1 68 0.0023 30.0 4.9 67 63-136 366-436 (999)
264 1eyb_A Homogentisate 1,2-dioxy 25.2 82 0.0028 27.4 4.6 50 61-122 348-398 (471)
265 1ufm_A COP9 complex subunit 4; 25.0 39 0.0013 22.0 2.1 23 158-180 31-53 (84)
266 2lnb_A Z-DNA-binding protein 1 24.3 49 0.0017 21.6 2.4 25 156-180 33-57 (80)
267 1xn7_A Hypothetical protein YH 24.1 74 0.0025 20.3 3.3 24 157-180 16-39 (78)
268 3plx_B Aspartate 1-decarboxyla 23.7 14 0.00048 25.5 -0.4 30 81-117 33-64 (102)
269 2heo_A Z-DNA binding protein 1 23.7 52 0.0018 20.1 2.4 24 157-180 25-48 (67)
270 1ujs_A Actin-binding LIM prote 22.6 22 0.00075 23.8 0.4 23 157-179 47-69 (88)
271 1uhe_A Aspartate 1-decarboxyla 22.1 15 0.00051 25.1 -0.5 30 81-117 32-63 (97)
272 3emr_A ECTD; double stranded b 20.9 65 0.0022 25.9 3.1 26 104-129 231-257 (310)
273 3gja_A CYTC3; halogenase, beta 20.6 99 0.0034 24.9 4.1 28 104-131 223-253 (319)
274 1qbj_A Protein (double-strande 20.4 95 0.0032 19.9 3.2 24 157-180 27-50 (81)
275 3dxt_A JMJC domain-containing 20.2 1.2E+02 0.0041 25.4 4.5 32 103-134 262-293 (354)
276 3lsg_A Two-component response 20.2 99 0.0034 19.9 3.4 24 157-180 19-42 (103)
277 2dkz_A Hypothetical protein LO 20.1 57 0.002 21.6 2.0 28 149-179 47-74 (84)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.97 E-value=7.6e-31 Score=208.11 Aligned_cols=166 Identities=46% Similarity=0.825 Sum_probs=144.2
Q ss_pred cCCCCCCCeeeecCCCCC-------------------------------CccCCCeEEEEeecCCCCCCccCceEEEEEE
Q 048538 14 FDPSPLQDICVAIDEPKN-------------------------------AANRLGFSVKIANVEQIPGLNTLGISAVRID 62 (181)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~-------------------------------~~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~ 62 (181)
+||+|+||+|+. |+.+ +.|..|+.++.++...+|++++.++++.+++
T Consensus 1 ~~~~~~~d~c~~--~~~~~~~~~~g~~c~~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~ 78 (201)
T 1fi2_A 1 TDPDPLQDFCVA--DLDGKAVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVD 78 (201)
T ss_dssp CCCCCSSSCCCB--CCCTTSCCCSSCCBCCGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEE
T ss_pred CCCcccceeEEe--cCCCCcccccCcccccCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEE
Confidence 489999999976 3321 1356688899999999999999999999999
Q ss_pred EcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCC
Q 048538 63 YAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSSQNP 142 (181)
Q Consensus 63 l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~~ 142 (181)
++||+..++|||++..|++||++|++++.+.+.+.++++...+.|++||++++|+|++|+++|.+++++++++++..+++
T Consensus 79 l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p 158 (201)
T 1fi2_A 79 FAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNP 158 (201)
T ss_dssp ECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCC
T ss_pred ECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCC
Confidence 99999999999996689999999999999864310001223689999999999999999999999999999999999999
Q ss_pred ceeeeecchhcCCCCCCHHHHHHHcCCCHHHHHHHHhcC
Q 048538 143 GVITIANSVFGANPPINPDFLAKAFQLDVDVVKDLEAKF 181 (181)
Q Consensus 143 g~~~~~~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~~ 181 (181)
+.+.++.++|+.+|++++++|+++|+++++++++|+++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~ 197 (201)
T 1fi2_A 159 GIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKF 197 (201)
T ss_dssp CCEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHS
T ss_pred CeEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhh
Confidence 999999999998788999999999999999999999986
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.94 E-value=3e-26 Score=201.51 Aligned_cols=143 Identities=17% Similarity=0.233 Sum_probs=130.5
Q ss_pred CccCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCc
Q 048538 32 AANRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGD 111 (181)
Q Consensus 32 ~~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD 111 (181)
.++..||+++.++..++|++++.++++.+++|.||++.+||||+++.|++||++|++++++.+.+ |++.....|++||
T Consensus 299 ~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~--g~~~f~~~l~~GD 376 (466)
T 3kgl_A 299 VYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDN--GDRVFDGQVSQGQ 376 (466)
T ss_dssp EEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTT--SCEEEEEEEETTC
T ss_pred cccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCC--CcEEEEeEecCCc
Confidence 35788999999999999999999999999999999999999999999999999999999999763 2444566799999
Q ss_pred EEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeee--cchhcCCCCCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 112 VFVFPIGLIHFQFNIGKTNAVAIAALSSQNPGVITIA--NSVFGANPPINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 112 ~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~~g~~~~~--~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
+++||+|.+|+. |.+++++.+++++++++|+...++ .++|++ +|+++|+++|+++.+++++|+++
T Consensus 377 V~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~~---lP~eVla~aF~v~~~~v~~Lk~~ 443 (466)
T 3kgl_A 377 LLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLRG---LPLEVISNGYQISLEEARRVKFN 443 (466)
T ss_dssp EEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHhCcCHHHHHHHHhc
Confidence 999999999988 678889999999999999988887 688987 99999999999999999999975
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.93 E-value=1.5e-25 Score=198.28 Aligned_cols=143 Identities=21% Similarity=0.256 Sum_probs=128.7
Q ss_pred CccCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCc
Q 048538 32 AANRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGD 111 (181)
Q Consensus 32 ~~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD 111 (181)
.++..||+++.++...+|++++.++++.+++|.||++.+||||+++.|++||++|++++++.+.+ |++.....|++||
T Consensus 334 i~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~--g~~~f~~~l~~GD 411 (496)
T 3ksc_A 334 IYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCN--GNTVFDGELEAGR 411 (496)
T ss_dssp EEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTT--SCEEEEEEEETTC
T ss_pred cccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCC--CcEEEEEEecCCe
Confidence 35777999999999999999999999999999999999999999999999999999999999763 2444456699999
Q ss_pred EEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeee--cchhcCCCCCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 112 VFVFPIGLIHFQFNIGKTNAVAIAALSSQNPGVITIA--NSVFGANPPINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 112 ~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~~g~~~~~--~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
+++||+|.+|+..|. ++++.+++++++++|+...++ .++|++ +|+++|+++|+++.+++++|+++
T Consensus 412 V~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~~LaG~~sv~~~---~p~eVLa~aF~v~~~~v~~Lk~~ 478 (496)
T 3ksc_A 412 ALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIARLAGTSSVINN---LPLDVVAATFNLQRNEARQLKSN 478 (496)
T ss_dssp EEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEEESSSTTCTTTT---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEEECCCCEEEEEeC-CCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHHCcCHHHHHHHHhc
Confidence 999999999988775 788999999988899988776 688987 99999999999999999999974
No 4
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.93 E-value=5.2e-25 Score=194.68 Aligned_cols=144 Identities=21% Similarity=0.268 Sum_probs=129.5
Q ss_pred CccCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCc
Q 048538 32 AANRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGD 111 (181)
Q Consensus 32 ~~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD 111 (181)
+++..||+++.++..++|++++.++++.+++++||++.+||||+++.|++||++|++++.+++.+ |++.....|++||
T Consensus 314 ~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~--G~~~~~~~l~~GD 391 (476)
T 1fxz_A 314 IYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCN--GERVFDGELQEGR 391 (476)
T ss_dssp EEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTT--SCEEEEEEEETTC
T ss_pred cccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecC--CCEEeeeEEcCCC
Confidence 45788999999999999999999999999999999999999999889999999999999998653 1333345699999
Q ss_pred EEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeee--cchhcCCCCCCHHHHHHHcCCCHHHHHHHHhcC
Q 048538 112 VFVFPIGLIHFQFNIGKTNAVAIAALSSQNPGVITIA--NSVFGANPPINPDFLAKAFQLDVDVVKDLEAKF 181 (181)
Q Consensus 112 ~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~~g~~~~~--~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~~ 181 (181)
+++||+|++|++.| +++++.++++.++++++...++ .++|+. +|+++|+++|+++.+++++|++++
T Consensus 392 v~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~~---~p~~Vla~af~~~~~~v~~l~~~~ 459 (476)
T 1fxz_A 392 VLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLNA---LPEEVIQHTFNLKSQQARQIKNNN 459 (476)
T ss_dssp EEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred EEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHHh---CCHHHHHHHhCcCHHHHHHHHhhC
Confidence 99999999999999 8889999999988889888787 789997 999999999999999999999864
No 5
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.93 E-value=6.1e-25 Score=195.12 Aligned_cols=144 Identities=25% Similarity=0.271 Sum_probs=129.4
Q ss_pred CccCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCc
Q 048538 32 AANRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGD 111 (181)
Q Consensus 32 ~~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD 111 (181)
+.+..||+++.++..++|++++.++++.+++++||++.+||||+++.|++||++|++++.+++.+ |++.....|++||
T Consensus 348 ~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~--G~~~~~~~l~~GD 425 (510)
T 3c3v_A 348 IYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSN--GNRVYDEELQEGH 425 (510)
T ss_dssp EEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTT--SCEEEEEEEETTC
T ss_pred cccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCC--CCEEEeEEEcCCc
Confidence 34788999999999999999998999999999999999999999899999999999999998653 2333345699999
Q ss_pred EEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeee--cchhcCCCCCCHHHHHHHcCCCHHHHHHHHhcC
Q 048538 112 VFVFPIGLIHFQFNIGKTNAVAIAALSSQNPGVITIA--NSVFGANPPINPDFLAKAFQLDVDVVKDLEAKF 181 (181)
Q Consensus 112 ~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~~g~~~~~--~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~~ 181 (181)
+++||+|++|++.| +++++.+++++++++++...++ .++|+. +|+++|+++|+++.+++++|++++
T Consensus 426 v~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~~---lp~eVla~aF~v~~e~v~~L~~~~ 493 (510)
T 3c3v_A 426 VLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVIDN---LPEEVVANSYGLPREQARQLKNNN 493 (510)
T ss_dssp EEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTTT---SCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred EEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHHh---CCHHHHHHHHCcCHHHHHHHHhhC
Confidence 99999999999999 8889999999888899988887 789987 999999999999999999999864
No 6
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.93 E-value=2.2e-25 Score=195.99 Aligned_cols=143 Identities=16% Similarity=0.184 Sum_probs=129.8
Q ss_pred CccCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCc
Q 048538 32 AANRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGD 111 (181)
Q Consensus 32 ~~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD 111 (181)
.++..||+++.++..++|++++.++++.+++|.||++.+||||+++.|++||++|++++++.+.+ |++.....|++||
T Consensus 299 v~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~--g~~~f~~~l~~GD 376 (465)
T 3qac_A 299 VYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQ--GQSVFDEELSRGQ 376 (465)
T ss_dssp EEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTT--SCEEEEEEEETTC
T ss_pred cccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCC--CcEEEEEEecCCe
Confidence 45778999999999999999999999999999999999999999999999999999999999763 2454556799999
Q ss_pred EEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeee--cchhcCCCCCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 112 VFVFPIGLIHFQFNIGKTNAVAIAALSSQNPGVITIA--NSVFGANPPINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 112 ~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~~g~~~~~--~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
+++||+|.+|+.. .+++++.+++++++++|+...++ .++|++ +|+++|+++|+++.+++++|+++
T Consensus 377 VfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~~---ip~eVla~aF~v~~e~v~~Lk~~ 443 (465)
T 3qac_A 377 LVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIRS---LPIDVVSNIYQISREEAFGLKFN 443 (465)
T ss_dssp EEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhhh---CCHHHHHHHhCCCHHHHHHHHhc
Confidence 9999999999976 46789999999998999988886 689987 99999999999999999999975
No 7
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.93 E-value=2.7e-25 Score=195.65 Aligned_cols=143 Identities=17% Similarity=0.198 Sum_probs=129.9
Q ss_pred CccCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCc
Q 048538 32 AANRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGD 111 (181)
Q Consensus 32 ~~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD 111 (181)
+++..||+++.++..++|++++.++++.+++|.||++.+||||+++.|++||++|++++++++.+ |++.....|++||
T Consensus 298 ~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~--g~~~~~~~l~~GD 375 (459)
T 2e9q_A 298 VFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNF--GQSVFDGEVREGQ 375 (459)
T ss_dssp EEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTT--SCEEEEEEEETTC
T ss_pred cccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCC--CCEEEeeEEeCCc
Confidence 34788999999999999999999999999999999999999999999999999999999998753 2343334599999
Q ss_pred EEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeee--cchhcCCCCCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 112 VFVFPIGLIHFQFNIGKTNAVAIAALSSQNPGVITIA--NSVFGANPPINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 112 ~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~~g~~~~~--~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
+++||+|.+|+..| +++++.+++++++++++...++ .++|+. +|+++|+++|+++.+++++|+++
T Consensus 376 v~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~~---~p~~Vla~af~v~~~~v~~l~~~ 442 (459)
T 2e9q_A 376 VLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMRM---LPLGVLSNMYRISREEAQRLKYG 442 (459)
T ss_dssp EEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHHh---CCHHHHHHHHCcCHHHHHHHHhc
Confidence 99999999999999 7789999999998899988887 789987 99999999999999999999985
No 8
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.92 E-value=1.9e-25 Score=197.96 Aligned_cols=143 Identities=22% Similarity=0.296 Sum_probs=127.3
Q ss_pred CccCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCc
Q 048538 32 AANRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGD 111 (181)
Q Consensus 32 ~~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD 111 (181)
++|..||+++.++..+||++++.++++.+++|.||++.+||||+++.|++||++|++++.+++.+ |++.....|++||
T Consensus 370 ~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~--G~~v~~~~L~~GD 447 (531)
T 3fz3_A 370 IFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNEN--GDAILDQEVQQGQ 447 (531)
T ss_dssp EEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTT--SCEEEEEEEETTC
T ss_pred cccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCC--CcEEEEEEecCCe
Confidence 45788999999999999999999999999999999999999999999999999999999998753 2444678899999
Q ss_pred EEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeee--cchhcCCCCCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 112 VFVFPIGLIHFQFNIGKTNAVAIAALSSQNPGVITIA--NSVFGANPPINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 112 ~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~~g~~~~~--~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
+++||+|++|+.. .+++.+.++++.++++|+...++ .++|++ +|+++|+++|+++.+++++|+++
T Consensus 448 V~v~P~G~~H~~~-ag~e~l~flaF~ss~np~~~~LaG~~svf~~---lP~eVLa~aF~v~~e~v~kLk~~ 514 (531)
T 3fz3_A 448 LFIVPQNHGVIQQ-AGNQGFEYFAFKTEENAFINTLAGRTSFLRA---LPDEVLANAYQISREQARQLKYN 514 (531)
T ss_dssp EEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSTTCHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEEECCCCeEEEe-cCCCCEEEEEEecCCCCcceeccchhHHHHh---CCHHHHHHHhCcCHHHHHHHHhc
Confidence 9999999999765 45778888866667888887777 788987 99999999999999999999985
No 9
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.92 E-value=1.9e-24 Score=168.49 Aligned_cols=137 Identities=18% Similarity=0.250 Sum_probs=114.1
Q ss_pred ccCCCeEEEEeec-----CCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEe
Q 048538 33 ANRLGFSVKIANV-----EQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVL 107 (181)
Q Consensus 33 ~~~~g~~~~~~~~-----~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l 107 (181)
.+.-||+++.+.. ..+|+++ ++++.+++++||+..++| |++++|++||++|+++++++.. +....+.|
T Consensus 15 ~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~~----~~~~~~~l 87 (178)
T 1dgw_A 15 FKNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNP----DGRDTYKL 87 (178)
T ss_dssp EEETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEET----TEEEEEEE
T ss_pred eEcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEeC----CCcEEEEE
Confidence 4667888888765 4466655 688999999999999999 7768999999999999999755 23457899
Q ss_pred cCCcEEEEcCCCeEEEEeCCCC-cEEEEEEEc-CCCCcee---eee-----cchhcCCCCCCHHHHHHHcCCCHHHHHHH
Q 048538 108 KKGDVFVFPIGLIHFQFNIGKT-NAVAIAALS-SQNPGVI---TIA-----NSVFGANPPINPDFLAKAFQLDVDVVKDL 177 (181)
Q Consensus 108 ~~GD~i~ip~g~~H~~~N~g~~-~~~~l~v~~-~~~~g~~---~~~-----~s~~~~~~~~~~e~l~~~~~v~~~~~~~~ 177 (181)
++||++++|+|.+|+++|.+++ +++++++.. ..+||.+ .++ .++|++ +|+++|+++|+++++++++|
T Consensus 88 ~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~~---~p~~vla~af~v~~~~~~~l 164 (178)
T 1dgw_A 88 DQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLEASYDSPYDEIEQT 164 (178)
T ss_dssp ETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHHHHHTSCHHHHHHH
T ss_pred CCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhhh---CCHHHHHHHHCcCHHHHHHH
Confidence 9999999999999999999986 889988765 4566633 222 578997 99999999999999999999
Q ss_pred Hh
Q 048538 178 EA 179 (181)
Q Consensus 178 ~~ 179 (181)
++
T Consensus 165 ~~ 166 (178)
T 1dgw_A 165 LL 166 (178)
T ss_dssp TT
T ss_pred hc
Confidence 84
No 10
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.92 E-value=1.1e-24 Score=193.16 Aligned_cols=142 Identities=22% Similarity=0.312 Sum_probs=128.1
Q ss_pred CccCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCc
Q 048538 32 AANRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGD 111 (181)
Q Consensus 32 ~~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD 111 (181)
+++..||+++.++..++|++++.++++.+++++||++.+||||+++.|++||++|++++.+++.+ |++.....|++||
T Consensus 343 ~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~--g~~~~~~~l~~GD 420 (493)
T 2d5f_A 343 FYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQ--GNAVFDGELRRGQ 420 (493)
T ss_dssp EEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTT--SCEEEEEEEETTC
T ss_pred cccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCC--CCEEEeEEEcCCC
Confidence 45788999999999999999998999999999999999999999889999999999999998653 1333335699999
Q ss_pred EEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeeecchhcCCCCCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 112 VFVFPIGLIHFQFNIGKTNAVAIAALSSQNPGVITIANSVFGANPPINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 112 ~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~~g~~~~~~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
+++||+|++|+..| +++++.+++++++++|+...+ .++|+. +|+++|+++|+++.+++++|+++
T Consensus 421 v~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~~---~p~eVla~aF~v~~~~v~~l~~~ 484 (493)
T 2d5f_A 421 LLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFRA---IPSEVLSNSYNLGQSQVRQLKYQ 484 (493)
T ss_dssp EEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHHh---CCHHHHHHHHCcCHHHHHHHHhc
Confidence 99999999999998 458899999999999998888 889987 99999999999999999999976
No 11
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.90 E-value=4.9e-24 Score=188.41 Aligned_cols=159 Identities=17% Similarity=0.297 Sum_probs=126.9
Q ss_pred ccCCCCCCCeeeecCCCCC--Cc---cCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCe
Q 048538 13 AFDPSPLQDICVAIDEPKN--AA---NRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGT 87 (181)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~--~~---~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~ 87 (181)
++.....++.|.- ++|++ |. ..-+| .++++....+.++..++++.+++|+||+..+||||+ +.|++||++|+
T Consensus 2 ~~~~~~~~~~c~~-~~l~a~~P~~~v~se~G-~~e~~~~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~ 78 (476)
T 1fxz_A 2 SSREQPQQNECQI-QKLNALKPDNRIESEGG-LIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGK 78 (476)
T ss_dssp --------CTTCC-SCCCCBCCSCEEEETTE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECC
T ss_pred Ccccccccccccc-ccCCCCCCceEEecCCc-eEEeeCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecE
Confidence 3445567788974 88876 43 34466 666688888988888999999999999999999999 99999999999
Q ss_pred EEEEEEeccCCCCe----------------------eEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCC----
Q 048538 88 LYVGFVTSNELNNT----------------------LIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSSQN---- 141 (181)
Q Consensus 88 ~~~~v~~~~~~~~~----------------------~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~---- 141 (181)
+.+.++.++ .. ...+.|++||+++||+|++||++|.|+++++++++++..+
T Consensus 79 g~~g~v~pg---~~et~~~~~~~~~~~~~~~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nq 155 (476)
T 1fxz_A 79 GIFGMIYPG---CPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQ 155 (476)
T ss_dssp EEEEEECTT---CCCC------------------CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCC
T ss_pred EEEEEEcCC---CcchhhccccccccccccccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccc
Confidence 999998643 11 1257899999999999999999999999999999998433
Q ss_pred ----Cceeeee--------------------------------cchhcCCCCCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 142 ----PGVITIA--------------------------------NSVFGANPPINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 142 ----~g~~~~~--------------------------------~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
+..|.++ .++|++ |++++|+++|+|+.+++++|+++
T Consensus 156 ld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~g---f~~~vLa~af~v~~~~~~kl~~~ 227 (476)
T 1fxz_A 156 LDQMPRRFYLAGNQEQEFLKYQQEQGGHQSQKGKHQQEEENEGGSILSG---FTLEFLEHAFSVDKQIAKNLQGE 227 (476)
T ss_dssp SCSSCCEEESSSSCCCTTHHHHC-------------------CCCGGGG---SCHHHHHHHHTCCHHHHHHHSCC
T ss_pred cCCccceeeccCCccccccccccccccccccccccccccccccchhhhc---CCHHHHHhhhCCCHHHHHhhhcc
Confidence 3344443 379998 99999999999999999999875
No 12
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.90 E-value=5.4e-24 Score=187.37 Aligned_cols=156 Identities=20% Similarity=0.328 Sum_probs=125.9
Q ss_pred CCCCCeeeecCCCCC--Cc---cCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEE
Q 048538 17 SPLQDICVAIDEPKN--AA---NRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVG 91 (181)
Q Consensus 17 ~~~~~~~~~~~~~~~--~~---~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~ 91 (181)
...++.|.- ++|.+ |. ..-+| .++++....|.+++.++++.+++|+||+..+||||+ +.|++||++|++.++
T Consensus 21 ~~~~~~c~~-~~l~a~eP~~~v~se~G-~~~~~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg 97 (459)
T 2e9q_A 21 YQSPRACRL-ENLRAQDPVRRAEAEAG-FTEVWDQDNDEFQCAGVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRG 97 (459)
T ss_dssp -----CCCC-SSCCCBCCCEEEEETTE-EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEE
T ss_pred hcccccccc-ccCCcCCCCceEecCCc-EEEecCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEE
Confidence 345688974 88876 43 34466 666688888999888999999999999999999999 999999999999999
Q ss_pred EEeccCCCCe--------------------eEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCC--------Cc
Q 048538 92 FVTSNELNNT--------------------LIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSSQN--------PG 143 (181)
Q Consensus 92 v~~~~~~~~~--------------------~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~--------~g 143 (181)
++.++. .+ ...+.|++||+++||+|++||++|.|+++++++++++..+ +.
T Consensus 98 ~v~p~~--~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~ 175 (459)
T 2e9q_A 98 IAIPGC--AETYQTDLRRSQSAGSAFKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLR 175 (459)
T ss_dssp ECCTTC--CCCEEECCC-------CCCEEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCC
T ss_pred EEeCCC--cchhccchhhccccccccccccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccc
Confidence 975420 00 1246899999999999999999999999999999998443 33
Q ss_pred eeeee--------------------------cchhcCCCCCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 144 VITIA--------------------------NSVFGANPPINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 144 ~~~~~--------------------------~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
.|.++ .++|++ |++++|+++|+++.+++++|+++
T Consensus 176 ~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~~~nif~g---f~~evLa~aF~v~~~~v~kL~~~ 235 (459)
T 2e9q_A 176 KFYLAGRPEQVERGVEEWERSSRKGSSGEKSGNIFSG---FADEFLEEAFQIDGGLVRKLKGE 235 (459)
T ss_dssp EEESSSCCCCCSSTTCC------------CCCCTTTT---SCHHHHHHHHTCCHHHHHHHHTT
T ss_pred eeeccCCccccchhhhccccccccccccccccchhhc---CCHHHHHhhcCCCHHHHHhhhhc
Confidence 44443 378998 99999999999999999999975
No 13
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.90 E-value=8.7e-24 Score=185.81 Aligned_cols=159 Identities=19% Similarity=0.348 Sum_probs=126.7
Q ss_pred cCCCCCCCeeeecCCCCC--Cc---cCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeE
Q 048538 14 FDPSPLQDICVAIDEPKN--AA---NRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTL 88 (181)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~--~~---~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~ 88 (181)
++....++.|.. ++|.+ |. ..-|| .++.|....+.+...++++.+++|+||+..+||||. +.|++||++|++
T Consensus 5 ~~~~~~~~~c~~-~~l~a~eP~~~i~se~G-~~e~~d~~~~~l~~~gvs~~R~~i~P~gl~~Ph~h~-a~ei~yV~qG~g 81 (465)
T 3qac_A 5 FREFQQGNECQI-DRLTALEPTNRIQAERG-LTEVWDSNEQEFRCAGVSVIRRTIEPHGLLLPSFTS-APELIYIEQGNG 81 (465)
T ss_dssp -----CCCTTCC-SCCCCBCCCEEEEETTE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECEE
T ss_pred cccccccccccc-ccCCCCCCccceeCCCc-EEEEECCCChhhcccceEEEEEEEcCCcCcccEEcC-CCEEEEEEECcE
Confidence 345677888974 89987 43 35677 555566666778888999999999999999999995 999999999999
Q ss_pred EEEEEeccCCCCe------------------------------------eEeEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 048538 89 YVGFVTSNELNNT------------------------------------LIAKVLKKGDVFVFPIGLIHFQFNIGKTNAV 132 (181)
Q Consensus 89 ~~~v~~~~~~~~~------------------------------------~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~ 132 (181)
.+++..++. .+ .....+++||++++|+|+.||++|.|+++++
T Consensus 82 ~~g~v~pgc--~etf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv 159 (465)
T 3qac_A 82 ITGMMIPGC--PETYESGSQQFQGGEDERIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLV 159 (465)
T ss_dssp EEEEECTTC--CCCC------------------------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEE
T ss_pred EEEEecCCC--CceeecchhccccccccccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEE
Confidence 999885521 11 0135899999999999999999999999999
Q ss_pred EEEEEcCC---------CCceeeee------------------------cchhcCCCCCCHHHHHHHcCCCHHHHHHHHh
Q 048538 133 AIAALSSQ---------NPGVITIA------------------------NSVFGANPPINPDFLAKAFQLDVDVVKDLEA 179 (181)
Q Consensus 133 ~l~v~~~~---------~~g~~~~~------------------------~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~ 179 (181)
++++++.. .+..|.++ .++|++ |++++|+.+|+++++++++|++
T Consensus 160 ~v~~~d~~n~~nqld~~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~e~La~Af~v~~~~~~kl~~ 236 (465)
T 3qac_A 160 AVILIDTANHANQLDKNFPTRFYLAGKPQQEHSGEHQFSRESRRGERNTGNIFRG---FETRLLAESFGVSEEIAQKLQA 236 (465)
T ss_dssp EEEEECTTSTTCCSCSSSCCEEESSSCCCCSCC--------------CCCCGGGG---SCHHHHHHHHTCCHHHHHHHHT
T ss_pred EEEEEcCCCcccccccccceeEEecCCCccccccccccccccccccccccchhhc---CCHHHHHHHhCCCHHHHHHhhh
Confidence 99999853 34445553 479998 9999999999999999999985
Q ss_pred c
Q 048538 180 K 180 (181)
Q Consensus 180 ~ 180 (181)
+
T Consensus 237 ~ 237 (465)
T 3qac_A 237 E 237 (465)
T ss_dssp T
T ss_pred c
Confidence 4
No 14
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.90 E-value=3.1e-23 Score=182.09 Aligned_cols=138 Identities=18% Similarity=0.219 Sum_probs=114.5
Q ss_pred cCCCeEEEEeec--CCCCCCccCc-eEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCC
Q 048538 34 NRLGFSVKIANV--EQIPGLNTLG-ISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKG 110 (181)
Q Consensus 34 ~~~g~~~~~~~~--~~~p~l~~~~-~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~G 110 (181)
+.-+|++..+.. ...+.+++.+ +++.+++++||+..++|+|. ++|++||++|++++++..++ ....+.+++|
T Consensus 61 ~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pHh~~-a~E~~yVl~G~g~v~~v~~~----~~~~~~l~~G 135 (445)
T 2cav_A 61 KNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPHHSD-SDLLVLVLEGQAILVLVNPD----GRDTYKLDQG 135 (445)
T ss_dssp EETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEEEES-SEEEEEEEESEEEEEEEETT----EEEEEEEETT
T ss_pred EcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCcCCC-CceEEEEEeCEEEEEEEeCC----CCEEEEecCC
Confidence 345776666643 4456777756 99999999999999999555 99999999999999987552 2368999999
Q ss_pred cEEEEcCCCeEEEEeCC-CCcEEEEEEEc-CCCCc---eeeee-----cchhcCCCCCCHHHHHHHcCCCHHHHHHHHh
Q 048538 111 DVFVFPIGLIHFQFNIG-KTNAVAIAALS-SQNPG---VITIA-----NSVFGANPPINPDFLAKAFQLDVDVVKDLEA 179 (181)
Q Consensus 111 D~i~ip~g~~H~~~N~g-~~~~~~l~v~~-~~~~g---~~~~~-----~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~ 179 (181)
|++++|+|++|+++|.+ +++++++++++ ..+|+ .+.++ .++|++ ||+++|+++|+++++++++|++
T Consensus 136 Dv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~~---~~~~vLa~af~v~~~~v~~l~~ 211 (445)
T 2cav_A 136 DAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLEASYDSPYDEIEQTLL 211 (445)
T ss_dssp EEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHHHHHTSCHHHHHHHTT
T ss_pred CEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhhc---CCHHHHHHHhCCCHHHHHhhhc
Confidence 99999999999999998 79999999887 44454 33344 478998 9999999999999999999985
No 15
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.90 E-value=2.7e-23 Score=181.12 Aligned_cols=143 Identities=22% Similarity=0.136 Sum_probs=124.2
Q ss_pred ccCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCC---------CC--e
Q 048538 33 ANRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNEL---------NN--T 101 (181)
Q Consensus 33 ~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~---------~~--~ 101 (181)
++..+|+++.++..++|++++.++++.++++.||++.+||||+++.|++||++|++++++++.++. ++ +
T Consensus 226 ~~~~~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~ 305 (416)
T 1uij_A 226 YSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQ 305 (416)
T ss_dssp EECSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEE
T ss_pred ccCCCceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceE
Confidence 356677899999999999999999999999999999999999999999999999999999976410 00 1
Q ss_pred eEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCC-CCceeeee---cchhcCCCCCCHHHHHHHcCCCHHHHHHH
Q 048538 102 LIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSSQ-NPGVITIA---NSVFGANPPINPDFLAKAFQLDVDVVKDL 177 (181)
Q Consensus 102 ~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~-~~g~~~~~---~s~~~~~~~~~~e~l~~~~~v~~~~~~~~ 177 (181)
.....|++||+++||+|.+|++.|. +++.++++.++. +++...++ .++|++ +|+++|+++|+++.+++++|
T Consensus 306 ~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~~---~p~~vla~af~~~~~~v~~l 380 (416)
T 1uij_A 306 RYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVRQ---IERQVQELAFPGSAQDVERL 380 (416)
T ss_dssp EEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGGG---SCHHHHHHHSSSCHHHHHHH
T ss_pred EEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHHh---CCHHHHHHHHCcCHHHHHHH
Confidence 2233899999999999999999998 579999988755 78887776 689987 99999999999999999999
Q ss_pred Hhc
Q 048538 178 EAK 180 (181)
Q Consensus 178 ~~~ 180 (181)
+++
T Consensus 381 ~~~ 383 (416)
T 1uij_A 381 LKK 383 (416)
T ss_dssp TTS
T ss_pred Hhc
Confidence 874
No 16
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.90 E-value=2.2e-23 Score=184.91 Aligned_cols=157 Identities=24% Similarity=0.406 Sum_probs=127.1
Q ss_pred CCCCeeeecCCCCC--CccCC---CeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEE
Q 048538 18 PLQDICVAIDEPKN--AANRL---GFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGF 92 (181)
Q Consensus 18 ~~~~~~~~~~~~~~--~~~~~---g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v 92 (181)
..++.|.. ++|++ |.+.. || .+++|....|.+.+.++++.+++|+||+..+||||+ ..+++||++|++.+++
T Consensus 4 ~~~~~c~~-~~L~a~~P~~~~~se~G-~~e~~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~ 80 (493)
T 2d5f_A 4 SKFNECQL-NNLNALEPDHRVESEGG-LIETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGF 80 (493)
T ss_dssp ---CTTCC-SCCCCBCCCEEEECSSE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEE
T ss_pred ccccCCCc-ccCCCCCCcceeecCCc-EEEEeCCCChhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEE
Confidence 34567885 78887 65555 77 788888888999888999999999999999999999 8999999999999999
Q ss_pred EeccC-C------------CC-e--------eEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCC---C-----C
Q 048538 93 VTSNE-L------------NN-T--------LIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSSQ---N-----P 142 (181)
Q Consensus 93 ~~~~~-~------------~~-~--------~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~---~-----~ 142 (181)
+.++. + |. . ...+.|++||+++||+|++||++|.|+++++++++++.. + +
T Consensus 81 v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~ 160 (493)
T 2d5f_A 81 AFPGCPETFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNP 160 (493)
T ss_dssp CCTTCCCCEEECC-------------CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSC
T ss_pred EeCCCccccccccccccccccccccccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCccccccccc
Confidence 84320 0 00 0 125789999999999999999999999999999998733 2 2
Q ss_pred ceeeee-----------------------------------cchhcCCCCCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 143 GVITIA-----------------------------------NSVFGANPPINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 143 g~~~~~-----------------------------------~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
..|.++ .++|++ |++++|+++|+|+.+++++|+++
T Consensus 161 ~~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nif~g---f~~e~La~aF~v~~~~v~kl~~~ 230 (493)
T 2d5f_A 161 RVFYLAGNPDIEHPETMQQQQQQKSHGGRKQGQHQQQEEEGGSVLSG---FSKHFLAQSFNTNEDTAEKLRSP 230 (493)
T ss_dssp CCEESSSCCCCSCGGGTC---------------------CCCCGGGG---SCHHHHHHHTTCCHHHHHHTTCT
T ss_pred ceeeccCCccccchhhhhhcccccccccccccccccccccccchhhc---CCHHHHHhHhCCCHHHHHHhhhc
Confidence 344433 468998 99999999999999999999875
No 17
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.90 E-value=2.2e-23 Score=185.19 Aligned_cols=162 Identities=21% Similarity=0.375 Sum_probs=132.5
Q ss_pred ccCCCCCCCeeeecCCCCC--Ccc---CCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCe
Q 048538 13 AFDPSPLQDICVAIDEPKN--AAN---RLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGT 87 (181)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~--~~~---~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~ 87 (181)
++..++.++.|+- ++|++ |.+ +-+| ++++|....|.++..++++.+++|+||+...||||+ +.+++||++|+
T Consensus 2 ~~~~~~~~~~c~~-~~l~a~~p~~~~~se~G-~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~ 78 (510)
T 3c3v_A 2 SFRQQPEENACQF-QRLNAQRPDNRIESEGG-YIETWNPNNQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGR 78 (510)
T ss_dssp CCBCCCCTTTTCC-SCCCCBCCCEEEEETTE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECC
T ss_pred Ccccccccccccc-ccCCCCCchhhhccCCc-eEEEeCCCCcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCE
Confidence 3455778889985 89987 554 3466 888899989999999999999999999999999999 89999999999
Q ss_pred EEEEEEeccC-C--------CCe-----------------------eEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 048538 88 LYVGFVTSNE-L--------NNT-----------------------LIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIA 135 (181)
Q Consensus 88 ~~~~v~~~~~-~--------~~~-----------------------~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~ 135 (181)
+.+.++.++. + +++ ...+.|++||+|+||+|++||++|.|++++++++
T Consensus 79 g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~ 158 (510)
T 3c3v_A 79 GYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVS 158 (510)
T ss_dssp EEEEEECTTCCCCEEEECCC--------------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEE
T ss_pred EEEEEEeCCCccccccccccccccccccccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 9999986420 0 000 0137899999999999999999999999999999
Q ss_pred EEcCCC--------Cceeeee-----------------------------------------------------------
Q 048538 136 ALSSQN--------PGVITIA----------------------------------------------------------- 148 (181)
Q Consensus 136 v~~~~~--------~g~~~~~----------------------------------------------------------- 148 (181)
+++..+ +..|.++
T Consensus 159 ~~d~~n~~nqld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (510)
T 3c3v_A 159 LTDTNNNDNQLDQFPRRFNLAGNHEQEFLRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHE 238 (510)
T ss_dssp EECTTBTTCCSCSCCCCEESSCCCCCTTGGGCC-----------------------------------------------
T ss_pred EeCCCCcccccccccceeEecCCcccccchhhhccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 998443 2333332
Q ss_pred -cchhcCCCCCCHHHHHHHcCCC-HHHHHHHHhc
Q 048538 149 -NSVFGANPPINPDFLAKAFQLD-VDVVKDLEAK 180 (181)
Q Consensus 149 -~s~~~~~~~~~~e~l~~~~~v~-~~~~~~~~~~ 180 (181)
.++|++ |++++|+++|+|+ ++.+++|+++
T Consensus 239 ~~ni~sg---F~~~~La~af~v~~~~~~~~l~~~ 269 (510)
T 3c3v_A 239 GGNIFSG---FTPEFLAQAFQVDDRQIVQNLRGE 269 (510)
T ss_dssp -CCTGGG---SCHHHHHHHHTCCCHHHHHHHTTT
T ss_pred cccceec---CCHHHHHHHhCCCHHHHHHHhhcc
Confidence 368998 9999999999999 9999999763
No 18
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.89 E-value=1.2e-22 Score=178.42 Aligned_cols=143 Identities=20% Similarity=0.115 Sum_probs=123.4
Q ss_pred ccCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCC------CCe--eEe
Q 048538 33 ANRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNEL------NNT--LIA 104 (181)
Q Consensus 33 ~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~------~~~--~~~ 104 (181)
++..||+++.++..++|++++.++++.++++.||++.+||||+++.|+.||++|++++++.+.++. |++ ...
T Consensus 258 ~~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~ 337 (445)
T 2cav_A 258 YSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYA 337 (445)
T ss_dssp EESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEE
T ss_pred ccCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEE
Confidence 467788899999999999999999999999999999999999999999999999999999976310 112 356
Q ss_pred EEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCC-CCceeeee---cchhcCCCCCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 105 KVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSSQ-NPGVITIA---NSVFGANPPINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 105 ~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~-~~g~~~~~---~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
..|++||+++||+|.+|+..|. +++.++++.++. +++...++ .++|++ +|+++|+++|+++++++++|+++
T Consensus 338 ~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~vla~af~v~~~~v~~l~~~ 412 (445)
T 2cav_A 338 ATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVSDLTFPGSGEEVEELLEN 412 (445)
T ss_dssp EEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGGG---SCHHHHHHHSSSCHHHHHHHHHH
T ss_pred eEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhhh---CCHHHHHHHHCcCHHHHHHHHhc
Confidence 7799999999999999999998 468888876544 77777676 789987 99999999999999999999864
No 19
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.89 E-value=4.5e-23 Score=182.52 Aligned_cols=155 Identities=19% Similarity=0.339 Sum_probs=126.3
Q ss_pred CCCCCCeeeecCCCCC--Ccc---CCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEE
Q 048538 16 PSPLQDICVAIDEPKN--AAN---RLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYV 90 (181)
Q Consensus 16 ~~~~~~~~~~~~~~~~--~~~---~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~ 90 (181)
..|+++.|+ +++|.+ |.+ .-|| .+++|....|++++.++++.+++|+||++.+||+|. +.|++||++|++.+
T Consensus 3 ~~~~~~~c~-~~~L~a~eP~~~~~se~G-~~e~~~~~~~~L~~~gvs~~R~~i~pggl~lPh~~~-A~ei~~V~qG~g~~ 79 (496)
T 3ksc_A 3 EQPQQNECQ-LERLDALEPDNRIESEGG-LIETWNPNNKQFRCAGVALSRATLQRNALRRPYYSN-APQEIFIQQGNGYF 79 (496)
T ss_dssp ----CCTTC-CSCCCCBCCSEEEEETTE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEE
T ss_pred CCccccccc-cccCCcCCCccccCCCCc-EEEeccccchhhccCCceEEEEEecCCCEeCceEcC-CCEEEEEEeCceEE
Confidence 457778896 478876 433 4466 788888899999999999999999999999999995 99999999999999
Q ss_pred EEEeccCCCCee--------------------EeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCC--------
Q 048538 91 GFVTSNELNNTL--------------------IAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSSQNP-------- 142 (181)
Q Consensus 91 ~v~~~~~~~~~~--------------------~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~~-------- 142 (181)
++..++. .+. ..+.|++||+++||+|++||++|.|+++++++++++..+.
T Consensus 80 G~v~p~~--~e~f~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~ 157 (496)
T 3ksc_A 80 GMVFPGC--PETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMP 157 (496)
T ss_dssp EEECTTC--CCC---------------CCCCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSC
T ss_pred EEEeCCC--CccchhhhhcccccccccccchheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCce
Confidence 9986530 111 1348999999999999999999999999999998874432
Q ss_pred ceeeee------------------------cchhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 048538 143 GVITIA------------------------NSVFGANPPINPDFLAKAFQLDVDVVKDLE 178 (181)
Q Consensus 143 g~~~~~------------------------~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~ 178 (181)
..|.++ .++|++ |++++|+.+|+++.++++||.
T Consensus 158 r~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 158 RRFYLAGNHEQEFLQYQHQQGGKQEQENEGNNIFSG---FKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp CEEESSSSCCCTTGGGCC-----------CCSGGGG---SCHHHHHHHHTCCHHHHHHHT
T ss_pred eeeEecCCCccccccccccccccccccccCCCchhh---cCHHHHHHHHCCCHHHHHHHH
Confidence 233321 479998 999999999999999999998
No 20
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.89 E-value=1.4e-22 Score=177.36 Aligned_cols=143 Identities=20% Similarity=0.138 Sum_probs=123.1
Q ss_pred ccCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCC--------CCe--e
Q 048538 33 ANRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNEL--------NNT--L 102 (181)
Q Consensus 33 ~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~--------~~~--~ 102 (181)
++..||++++++..++|++++.++++.++++.||++.+||||+++.|++||++|++++++++.++. |++ .
T Consensus 243 ~~~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~ 322 (434)
T 2ea7_A 243 YSNKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQR 322 (434)
T ss_dssp EEETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEE
T ss_pred eeCCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEE
Confidence 366788899999999999999999999999999999999999999999999999999999976310 011 2
Q ss_pred EeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCC-CCceeeee---cchhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 048538 103 IAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSSQ-NPGVITIA---NSVFGANPPINPDFLAKAFQLDVDVVKDLE 178 (181)
Q Consensus 103 ~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~-~~g~~~~~---~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~ 178 (181)
....|++||+++||+|.+|+..|. +++.++++.+.. +++...++ .++|++ +|+++|+++|+++.+++++|+
T Consensus 323 ~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~vla~af~v~~~~v~~l~ 397 (434)
T 2ea7_A 323 YRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMSE---IPTEVLEVSFPASGKKVEKLI 397 (434)
T ss_dssp EEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGGG---SCHHHHHHHSSSCHHHHHHHH
T ss_pred EEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhhh---CCHHHHHHHHCcCHHHHHHHH
Confidence 233899999999999999999998 578999877644 67777776 688987 999999999999999999998
Q ss_pred hc
Q 048538 179 AK 180 (181)
Q Consensus 179 ~~ 180 (181)
++
T Consensus 398 ~~ 399 (434)
T 2ea7_A 398 KK 399 (434)
T ss_dssp TT
T ss_pred hc
Confidence 73
No 21
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.88 E-value=2.4e-22 Score=175.07 Aligned_cols=140 Identities=19% Similarity=0.151 Sum_probs=119.9
Q ss_pred cCCCeEEEEeecCCC-CCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCC------------
Q 048538 34 NRLGFSVKIANVEQI-PGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNN------------ 100 (181)
Q Consensus 34 ~~~g~~~~~~~~~~~-p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~------------ 100 (181)
+..+|+++.++..++ |.+++.++++.+++|.||++.+||||+++.|++||++|++++++.+.+. .
T Consensus 240 ~n~~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~--~~~~~~~~~~~~~ 317 (418)
T 3s7i_A 240 SNNFGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRK--EQQQRGRREEEED 317 (418)
T ss_dssp EETTEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEE--C------------
T ss_pred eCCCCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCC--ccccccccccccc
Confidence 455667999999999 9999999999999999999999999998999999999999999986531 1
Q ss_pred ------------eeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcC-CCCceeeeec---chhcCCCCCCHHHHH
Q 048538 101 ------------TLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSS-QNPGVITIAN---SVFGANPPINPDFLA 164 (181)
Q Consensus 101 ------------~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~-~~~g~~~~~~---s~~~~~~~~~~e~l~ 164 (181)
+.....|++||+++||+|.+|++.|.+ ++.++++.++ .+++.+.++. ++|++ +++++|+
T Consensus 318 ~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv~~~---~~~evla 392 (418)
T 3s7i_A 318 EDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNVIDQ---IEKQAKD 392 (418)
T ss_dssp -------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBHHHH---SCHHHHH
T ss_pred cccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhhhhc---CCHHHHH
Confidence 223577999999999999999998854 4887776544 4788777764 78887 9999999
Q ss_pred HHcCCCHHHHHHHHhc
Q 048538 165 KAFQLDVDVVKDLEAK 180 (181)
Q Consensus 165 ~~~~v~~~~~~~~~~~ 180 (181)
++|+++.+++++|++.
T Consensus 393 ~af~v~~~~v~~L~~~ 408 (418)
T 3s7i_A 393 LAFPGSGEQVEKLIKN 408 (418)
T ss_dssp HHSSSCHHHHHHHHHT
T ss_pred HHhCCCHHHHHHHHhc
Confidence 9999999999999873
No 22
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.88 E-value=1.4e-22 Score=178.20 Aligned_cols=156 Identities=21% Similarity=0.308 Sum_probs=125.3
Q ss_pred CCCeeeecCCCCC--Cc---cCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEE
Q 048538 19 LQDICVAIDEPKN--AA---NRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFV 93 (181)
Q Consensus 19 ~~~~~~~~~~~~~--~~---~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~ 93 (181)
+++.|. +++|++ |. ..-+| .++.|....|.+++.++++.+++++||+..+||+|+ +.|++||++|++.+.+.
T Consensus 3 ~~~~c~-~~~l~a~ep~~~~~se~G-~~e~w~~~~~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v 79 (466)
T 3kgl_A 3 FPNECQ-LDQLNALEPSHVLKAEAG-RIEVWDHHAPQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRV 79 (466)
T ss_dssp TTSTTC-CSCCCCBCCSEEEEETTE-EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEE
T ss_pred cccccc-cccCCCCCCcceeeCCCc-EEEEECCCChhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEe
Confidence 466786 378886 44 34577 455566666999999999999999999999999999 99999999999999998
Q ss_pred eccC-CC----C---------------------------------------------------eeEeEEecCCcEEEEcC
Q 048538 94 TSNE-LN----N---------------------------------------------------TLIAKVLKKGDVFVFPI 117 (181)
Q Consensus 94 ~~~~-~~----~---------------------------------------------------~~~~~~l~~GD~i~ip~ 117 (181)
.++- +. . ....+.|++||+++||+
T Consensus 80 ~pgc~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPa 159 (466)
T 3kgl_A 80 VPGCAETFQDSSVFQPGGGSPFGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHP 159 (466)
T ss_dssp CTTCCCCEEECCSSCCCC-----------------------------------------CCEEESCEEEEETTEEEEECT
T ss_pred cCCCcchhhccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECC
Confidence 6520 00 0 00125899999999999
Q ss_pred CCeEEEEeCCCCcEEEEEEEcCCC--------Cceeeee------------------cchhcCCCCCCHHHHHHHcCCCH
Q 048538 118 GLIHFQFNIGKTNAVAIAALSSQN--------PGVITIA------------------NSVFGANPPINPDFLAKAFQLDV 171 (181)
Q Consensus 118 g~~H~~~N~g~~~~~~l~v~~~~~--------~g~~~~~------------------~s~~~~~~~~~~e~l~~~~~v~~ 171 (181)
|++||++|.|+++++++++++..+ +..|.++ .++|++ |++++|+++|++++
T Consensus 160 G~~~~~~N~g~e~L~~l~~~d~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~sG---F~~e~La~Af~v~~ 236 (466)
T 3kgl_A 160 GVAQWFYNDGNQPLVIVSVLDLASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILNG---FTPEVLAKAFKIDV 236 (466)
T ss_dssp TCEEEEECCSSSCEEEEEEEESSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGGG---SCHHHHHHHHTSCH
T ss_pred CCcEEEEeCCCCcEEEEEEEcCCCcccccCCceeeeEecCCCccccccccccccccCCCcccc---CCHHHHHHHhCCCH
Confidence 999999999999999999987432 3445443 379998 99999999999999
Q ss_pred HHHHHHHhc
Q 048538 172 DVVKDLEAK 180 (181)
Q Consensus 172 ~~~~~~~~~ 180 (181)
++++||+++
T Consensus 237 e~~~kL~~~ 245 (466)
T 3kgl_A 237 RTAQQLQNQ 245 (466)
T ss_dssp HHHHHHTCT
T ss_pred HHHHHHhcc
Confidence 999999753
No 23
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.87 E-value=8.4e-22 Score=172.53 Aligned_cols=137 Identities=20% Similarity=0.261 Sum_probs=115.7
Q ss_pred cCCCeEEEEe--ecCCCCCCccCc-eEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCC
Q 048538 34 NRLGFSVKIA--NVEQIPGLNTLG-ISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKG 110 (181)
Q Consensus 34 ~~~g~~~~~~--~~~~~p~l~~~~-~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~G 110 (181)
+.-+|++..+ +....+.+++.+ +++.+++++||+..+|| |+++.|++||++|++++.+..+ ++...+.+++|
T Consensus 36 ~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~~----~~~~~~~l~~G 110 (434)
T 2ea7_A 36 RNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVNP----DSRDSYILEQG 110 (434)
T ss_dssp EETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS----SCEEEEEEETT
T ss_pred EcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEeC----CCCEEEEeCCC
Confidence 4567878887 446667777776 99999999999999999 5559999999999999999754 34568999999
Q ss_pred cEEEEcCCCeEEEEeCC-CCcEEEEEEEc-CCCCc---eeeeec-----chhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 048538 111 DVFVFPIGLIHFQFNIG-KTNAVAIAALS-SQNPG---VITIAN-----SVFGANPPINPDFLAKAFQLDVDVVKDLE 178 (181)
Q Consensus 111 D~i~ip~g~~H~~~N~g-~~~~~~l~v~~-~~~~g---~~~~~~-----s~~~~~~~~~~e~l~~~~~v~~~~~~~~~ 178 (181)
|++++|+|++|+++|.| ++++++++++. ..+|+ .+.++. ++|++ ||+++|+++|+++++++++|+
T Consensus 111 Dv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa~af~v~~~~v~~l~ 185 (434)
T 2ea7_A 111 HAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLRG---FSKNILEASFDSDFKEINRVL 185 (434)
T ss_dssp EEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGGG---SCHHHHHHHHTSCHHHHHHHH
T ss_pred CEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhhc---CCHHHHHHHhCCCHHHHHhhh
Confidence 99999999999999998 78999999875 44544 344543 58987 999999999999999999998
No 24
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.87 E-value=7.9e-22 Score=171.89 Aligned_cols=138 Identities=20% Similarity=0.259 Sum_probs=114.7
Q ss_pred ccCCCeEEEEe--ecCCCCCCccCc-eEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecC
Q 048538 33 ANRLGFSVKIA--NVEQIPGLNTLG-ISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKK 109 (181)
Q Consensus 33 ~~~~g~~~~~~--~~~~~p~l~~~~-~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~ 109 (181)
.+.-||++..+ +....+.+++.+ +++.+++++||+..++| |+++.|++||++|++++.+.++ ++..++.+++
T Consensus 23 ~~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~~----~~~~~~~l~~ 97 (416)
T 1uij_A 23 FENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVNN----DDRDSYNLHP 97 (416)
T ss_dssp EECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEECS----SCEEEEEECT
T ss_pred EEcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEEC----CCCeEEEecC
Confidence 35667878876 444456676666 89999999999999999 5459999999999999998754 2345799999
Q ss_pred CcEEEEcCCCeEEEEeCC-CCcEEEEEEEc-CCCCc---eeeeec-----chhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 048538 110 GDVFVFPIGLIHFQFNIG-KTNAVAIAALS-SQNPG---VITIAN-----SVFGANPPINPDFLAKAFQLDVDVVKDLE 178 (181)
Q Consensus 110 GD~i~ip~g~~H~~~N~g-~~~~~~l~v~~-~~~~g---~~~~~~-----s~~~~~~~~~~e~l~~~~~v~~~~~~~~~ 178 (181)
||++++|+|++|+++|.+ ++++++++++. ..+|+ .+.++. ++|++ ||+++|+++|+++++++++|+
T Consensus 98 GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa~af~v~~~~v~~l~ 173 (416)
T 1uij_A 98 GDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQG---FSHNILETSFHSEFEEINRVL 173 (416)
T ss_dssp TEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGGG---SCHHHHHHHHTSCHHHHHHHH
T ss_pred CCEEEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhhc---CCHHHHHHHhCcCHHHHHhhh
Confidence 999999999999999995 99999999886 44554 334443 58887 999999999999999999998
No 25
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.87 E-value=4.3e-22 Score=176.55 Aligned_cols=158 Identities=21% Similarity=0.343 Sum_probs=127.9
Q ss_pred CCCCCCeeeecCCCCC--Ccc---CCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEE
Q 048538 16 PSPLQDICVAIDEPKN--AAN---RLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYV 90 (181)
Q Consensus 16 ~~~~~~~~~~~~~~~~--~~~---~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~ 90 (181)
.-+.++.|. +++|++ |.+ +-|| ++++|...+|++++.++++++++|.|++..+||+|+ +.|++||++|++.+
T Consensus 5 ~~~~~~~C~-~~~l~a~eP~~~i~se~G-~~e~w~~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~ 81 (531)
T 3fz3_A 5 QLSPQNQCQ-LNQLQAREPDNRIQAEAG-QIETWNFNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVL 81 (531)
T ss_dssp --CTTTTTC-CCCCCCBCCCEEEEETTE-EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEE
T ss_pred hcccccccc-ccccCcCCCchhcccCCc-eEEEeCCCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEE
Confidence 446677896 378887 544 3466 788888889999999999999999999999999999 99999999999999
Q ss_pred EEEecc-CC---------C-------------------------------------------------------------
Q 048538 91 GFVTSN-EL---------N------------------------------------------------------------- 99 (181)
Q Consensus 91 ~v~~~~-~~---------~------------------------------------------------------------- 99 (181)
.+..++ ++ +
T Consensus 82 G~v~Pgcpet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (531)
T 3fz3_A 82 GAVFSGCPETFEESQQSSQQGRQQEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQ 161 (531)
T ss_dssp EECCTTCCCCEECCCC----------------------------------------------------------------
T ss_pred EEEcCCCccccccccccccccccccccccccccccccccccccccccccccccccccchhcccccccccccccccccccc
Confidence 987653 11 0
Q ss_pred ------Ce-eEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCC--------Cceeeee----------------
Q 048538 100 ------NT-LIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSSQN--------PGVITIA---------------- 148 (181)
Q Consensus 100 ------~~-~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~--------~g~~~~~---------------- 148 (181)
+. ...+.+++||++.||+|+.||++|.|+++++++++++..+ +..|.++
T Consensus 162 ~~~~~~d~hqkv~~vr~GDviaiPaG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~ 241 (531)
T 3fz3_A 162 QQFRQLDRHQKTRRIREGDVVAIPAGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPR 241 (531)
T ss_dssp ---CCSCEESCCEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC-------
T ss_pred ccccccccceeeecccCCcEEEECCCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCccccccccccccc
Confidence 00 1146799999999999999999999999999999997322 2333221
Q ss_pred ---------------------------cchhcCCCCCCHHHHHHHcCCCHHHHHHHHh
Q 048538 149 ---------------------------NSVFGANPPINPDFLAKAFQLDVDVVKDLEA 179 (181)
Q Consensus 149 ---------------------------~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~ 179 (181)
.++|++ |+.++|+.+|+|+++.++||.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~nifsG---Fs~e~La~A~~v~~~~a~kLq~ 296 (531)
T 3fz3_A 242 QQGEQGRPGQHQQPFGRPRQQEQQGNGNNVFSG---FNTQLLAQALNVNEETARNLQG 296 (531)
T ss_dssp -------------------------CCSSGGGG---SCHHHHHHHHTSCHHHHHHHHT
T ss_pred ccccccccccccccccccchhhhcccCCCeeec---CCHHHHHHHHCCCHHHHHHHhc
Confidence 369998 9999999999999999999985
No 26
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.87 E-value=4.2e-21 Score=163.21 Aligned_cols=138 Identities=20% Similarity=0.297 Sum_probs=120.6
Q ss_pred cCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 34 NRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 34 ~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
+..|++++.+....+|.++ .+.+.+++++||+..++|||++..|++||++|++++.+.+.+ ++...+.+++||++
T Consensus 214 ~~~gg~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~---g~~~~~~l~~GD~~ 288 (361)
T 2vqa_A 214 SLGGNELRLASAKEFPGSF--NMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASE---GKASVSRLQQGDVG 288 (361)
T ss_dssp EETTEEEEEECTTTCTTST--TCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECST---TCEEEEEECTTCEE
T ss_pred cCCCceEEEEehhhCcCcc--cceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcCC---CcEEEEEECCCCEE
Confidence 5668888888888888766 467889999999999999999559999999999999986432 22246899999999
Q ss_pred EEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeeecchhcCCCCCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 114 VFPIGLIHFQFNIGKTNAVAIAALSSQNPGVITIANSVFGANPPINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 114 ~ip~g~~H~~~N~g~~~~~~l~v~~~~~~g~~~~~~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
++|+|++|++.|.++++++++++++...++.+.++. ++++ +|+++|+++|+++.+++++|+++
T Consensus 289 ~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~-~~~~---~~~~vl~~~f~~~~~~~~~l~~~ 351 (361)
T 2vqa_A 289 YVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLST-WLAS---NPSSVLGNTFQISPELTKKLPVQ 351 (361)
T ss_dssp EECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHH-HHHT---SCHHHHHHHHTCCHHHHTTSCCS
T ss_pred EECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHH-Hhhh---CCHHHHHHHHCcCHHHHHhhhcc
Confidence 999999999999999999999999988888887775 6776 99999999999999999999865
No 27
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.86 E-value=1.8e-21 Score=168.56 Aligned_cols=136 Identities=24% Similarity=0.155 Sum_probs=116.8
Q ss_pred cCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccC----CCCeeEeEEecC
Q 048538 34 NRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNE----LNNTLIAKVLKK 109 (181)
Q Consensus 34 ~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~----~~~~~~~~~l~~ 109 (181)
+..+|+++.++..+ .++++.++++.||++.+||||+++.|+.||++|++++++++... ++++.....|++
T Consensus 223 ~n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~ 296 (397)
T 2phl_A 223 GNEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSK 296 (397)
T ss_dssp EETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEET
T ss_pred cCCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecC
Confidence 55577788888877 48999999999999999999999999999999999999997510 124556788999
Q ss_pred CcEEEEcCCCeEEEEeCCCCcEEEEEEEcCC-CCceeeee---cchhcCCCCCC-----HHHHHHHcCCCHHHHHHHHhc
Q 048538 110 GDVFVFPIGLIHFQFNIGKTNAVAIAALSSQ-NPGVITIA---NSVFGANPPIN-----PDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 110 GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~-~~g~~~~~---~s~~~~~~~~~-----~e~l~~~~~v~~~~~~~~~~~ 180 (181)
||+++||+|.+|++.|.+ ++.++++.++. +++...++ .++|++ +| +++|+++|+++++++++|+++
T Consensus 297 GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~~---~p~~~~~~eVla~af~v~~~~v~~l~~~ 371 (397)
T 2phl_A 297 DDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVISS---IGRALDGKDVLGLTFSGSGDEVMKLINK 371 (397)
T ss_dssp TCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHHH---HHTSTTHHHHHHHHSSSCHHHHHHHHTT
T ss_pred CCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHhh---CCCccchHHHHHHHhCcCHHHHHHHHhc
Confidence 999999999999999985 78998877654 77776666 788887 77 999999999999999999975
No 28
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.86 E-value=2e-21 Score=168.33 Aligned_cols=139 Identities=15% Similarity=0.134 Sum_probs=118.7
Q ss_pred CccCCCeEEEEe--ecCCCCCCccCc-eEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEec
Q 048538 32 AANRLGFSVKIA--NVEQIPGLNTLG-ISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLK 108 (181)
Q Consensus 32 ~~~~~g~~~~~~--~~~~~p~l~~~~-~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~ 108 (181)
..+.-+|.+..+ +....|.+++.+ +++.+++++||+..+||||. +.|++||++|++++++++.+ + ..++.|+
T Consensus 25 ~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~~-a~ei~yVl~G~~~v~~v~~~---~-~~~~~l~ 99 (397)
T 2phl_A 25 LFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQAD-AELLLVVRSGSAILVLVKPD---D-RREYFFL 99 (397)
T ss_dssp EEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEES-EEEEEEEEESEEEEEEEETT---T-EEEEEEE
T ss_pred eEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEecC-CCeEEEEEeeeEEEEEEeCC---C-cEEEEEC
Confidence 346678878887 666678888776 99999999999999999997 99999999999999998763 3 3578999
Q ss_pred CCcE------EEEcCCCeEEEEeCC-CCcEEEEEEEcCC---CCceeeee-----cchhcCCCCCCHHHHHHHcCCCHHH
Q 048538 109 KGDV------FVFPIGLIHFQFNIG-KTNAVAIAALSSQ---NPGVITIA-----NSVFGANPPINPDFLAKAFQLDVDV 173 (181)
Q Consensus 109 ~GD~------i~ip~g~~H~~~N~g-~~~~~~l~v~~~~---~~g~~~~~-----~s~~~~~~~~~~e~l~~~~~v~~~~ 173 (181)
+||+ ++||+|++|++.|.+ ++++++++++... .+..+.++ .++|++ ||+++|+++|++++++
T Consensus 100 ~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~~---~~~~vLa~af~v~~~~ 176 (397)
T 2phl_A 100 TSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQE---FSKHILEASFNSKFEE 176 (397)
T ss_dssp ESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGGG---SCHHHHHHHHTSCHHH
T ss_pred CCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhhc---CCHHHHHHHhCCCHHH
Confidence 9999 999999999999999 7899999988633 23345443 368887 9999999999999999
Q ss_pred HHHHH
Q 048538 174 VKDLE 178 (181)
Q Consensus 174 ~~~~~ 178 (181)
+++|+
T Consensus 177 v~~l~ 181 (397)
T 2phl_A 177 INRVL 181 (397)
T ss_dssp HHHHH
T ss_pred HHhhh
Confidence 99998
No 29
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.83 E-value=5.3e-20 Score=156.41 Aligned_cols=137 Identities=17% Similarity=0.211 Sum_probs=116.5
Q ss_pred cCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 34 NRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 34 ~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
...||+++.+....+|... ++.+.+++++||+..++|||+++.|++||++|++++++.+.+ ++...+.|++||++
T Consensus 32 ~~~~G~~~~~~~~~~p~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~---g~~~~~~l~~GD~~ 106 (361)
T 2vqa_A 32 LYDGGTTKQVGTYNFPVSK--GMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPE---GKVEIADVDKGGLW 106 (361)
T ss_dssp EETTEEEEEESTTTCTTCC--SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTT---SCEEEEEEETTEEE
T ss_pred ecCCceEEEeChhhCcccc--ceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCC---CcEEEEEEcCCCEE
Confidence 4568888999988899866 568889999999999999999889999999999999997542 22246899999999
Q ss_pred EEcCCCeEEEEeCCCCcEEEEEEEcCCCCc---eeeeecchhcCCCCCCHHHHHHHcCCCHHHHHHHHh
Q 048538 114 VFPIGLIHFQFNIGKTNAVAIAALSSQNPG---VITIANSVFGANPPINPDFLAKAFQLDVDVVKDLEA 179 (181)
Q Consensus 114 ~ip~g~~H~~~N~g~~~~~~l~v~~~~~~g---~~~~~~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~ 179 (181)
++|+|++|+++|.++++++++++++...+. .+. ..+++++ +|.++|+++|+++++.++++++
T Consensus 107 ~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~-~~~~~~~---~p~~vLa~~~~v~~~~~~~l~~ 171 (361)
T 2vqa_A 107 YFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFS-VTDWLSH---TPIAWVEENLGWTAAQVAQLPK 171 (361)
T ss_dssp EECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEE-HHHHHHT---SCHHHHHHHHTCCHHHHTTSCS
T ss_pred EECCCCeEEEEeCCCCCEEEEEEECCCCccccceec-HhHHHHh---CCHHHHHHHhCcCHHHHHhccc
Confidence 999999999999999999999998866543 343 4467887 9999999999999999988764
No 30
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.83 E-value=6e-20 Score=159.97 Aligned_cols=136 Identities=19% Similarity=0.287 Sum_probs=109.4
Q ss_pred cCCCeEEEEeec-----CCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEec
Q 048538 34 NRLGFSVKIANV-----EQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLK 108 (181)
Q Consensus 34 ~~~g~~~~~~~~-----~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~ 108 (181)
+.-.|.+..+.. ..+++++ ++.+.+++++|++..+|| |+++.|++||++|++.+++.++ ++...+.|+
T Consensus 19 ~se~G~i~~l~~f~~~s~~l~~l~--~~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~----~~~~~~~l~ 91 (418)
T 3s7i_A 19 GNQNGRIRVLQRFDQRSRQFQNLQ--NHRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANG----NNRKSFNLD 91 (418)
T ss_dssp ECSSEEEEEECCHHHHCGGGGGGT--TCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS----SCEEEEEEE
T ss_pred EcCCcEEEEecccCCcchhccccc--ceEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEec----CCEEEEEec
Confidence 455666777742 3456555 567889999999999999 7779999999999999999876 345678999
Q ss_pred CCcEEEEcCCCeEEEEeCCC-CcEEEEEEE-cCCCCceee---e-----ecchhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 048538 109 KGDVFVFPIGLIHFQFNIGK-TNAVAIAAL-SSQNPGVIT---I-----ANSVFGANPPINPDFLAKAFQLDVDVVKDLE 178 (181)
Q Consensus 109 ~GD~i~ip~g~~H~~~N~g~-~~~~~l~v~-~~~~~g~~~---~-----~~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~ 178 (181)
+||+++||+|++||++|.++ +.++++++. +..+||.+. + ..++|++ ||+++|+++|+++++++++|+
T Consensus 92 ~GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~g---f~~evLa~af~v~~~~v~kl~ 168 (418)
T 3s7i_A 92 EGHALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQG---FSRNTLEAAFNAEFNEIRRVL 168 (418)
T ss_dssp TTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGGG---SCHHHHHHHHTSCHHHHHHHT
T ss_pred CCCEEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhhc---CCHHHHHHHHCcCHHHHHhhh
Confidence 99999999999999999875 567777643 445566542 2 2468987 999999999999999999998
Q ss_pred h
Q 048538 179 A 179 (181)
Q Consensus 179 ~ 179 (181)
+
T Consensus 169 ~ 169 (418)
T 3s7i_A 169 L 169 (418)
T ss_dssp T
T ss_pred c
Confidence 3
No 31
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.80 E-value=8.5e-19 Score=150.39 Aligned_cols=138 Identities=17% Similarity=0.226 Sum_probs=114.0
Q ss_pred cCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 34 NRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 34 ~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
...++.++.+....++... .+.+.+++++||+..++|||++..|++||++|++++.+++.+ ++...+.|++||++
T Consensus 237 ~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~---g~~~~~~l~~GD~~ 311 (385)
T 1j58_A 237 ESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASD---GHARTFNYQAGDVG 311 (385)
T ss_dssp ECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEET---TEEEEEEEESSCEE
T ss_pred eCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCC---CcEEEEEEcCCCEE
Confidence 3446666666666666433 578889999999999999999449999999999999987432 22357999999999
Q ss_pred EEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeeecchhcCCCCCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 114 VFPIGLIHFQFNIGKTNAVAIAALSSQNPGVITIANSVFGANPPINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 114 ~ip~g~~H~~~N~g~~~~~~l~v~~~~~~g~~~~~~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
++|+|++|++.|.+++++++++++....+..+.+. ++++. +++++++++|+++.+++++|+++
T Consensus 312 ~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~-~~l~~---~~~~v~~~~f~~~~~~~~~l~~~ 374 (385)
T 1j58_A 312 YVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLN-QWLAM---LPETFVQAHLDLGKDFTDVLSKE 374 (385)
T ss_dssp EECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHH-HHHHT---SCHHHHHHHHTCCHHHHTTCCSS
T ss_pred EECCCCeEEEEECCCCCEEEEEEECCCCccccCHH-HHHHh---CCHHHHHHHhCCCHHHHHhhhcc
Confidence 99999999999999999999999987777666554 45665 99999999999999999999865
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.74 E-value=7.9e-18 Score=144.34 Aligned_cols=135 Identities=16% Similarity=0.223 Sum_probs=111.4
Q ss_pred CCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEE
Q 048538 35 RLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFV 114 (181)
Q Consensus 35 ~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ 114 (181)
..||+++.+....+|..+ ++.+.+++++||+..++|||+ ..|++||++|++++.+++.+ ++...+.|++||+++
T Consensus 60 ~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~---g~~~~~~l~~GD~~~ 133 (385)
T 1j58_A 60 EKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEK---GRSFIDDVGEGDLWY 133 (385)
T ss_dssp ETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTT---SCEEEEEEETTEEEE
T ss_pred cCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCC---CcEEEEEeCCCCEEE
Confidence 468889999999999876 678899999999999999999 89999999999999997532 222246999999999
Q ss_pred EcCCCeEEEEeCCCCcEEEEEEEcCCCCceee--eecchhcCCCCCCHHHHHHHcCCCHHHHHHHHh
Q 048538 115 FPIGLIHFQFNIGKTNAVAIAALSSQNPGVIT--IANSVFGANPPINPDFLAKAFQLDVDVVKDLEA 179 (181)
Q Consensus 115 ip~g~~H~~~N~g~~~~~~l~v~~~~~~g~~~--~~~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~ 179 (181)
+|+|++|++.|.+ ++++++.+++........ ...++|.+ ++.++|+++|+++.++++++++
T Consensus 134 ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~p~evla~~~~vs~~~~~~l~~ 196 (385)
T 1j58_A 134 FPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLTDWLAH---TPKEVIAANFGVTKEEISNLPG 196 (385)
T ss_dssp ECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHHHHHHT---SCHHHHHHHHTCCTGGGTTSCS
T ss_pred ECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhhhhhhc---ccHHHHHHHhCCCHHHHHhccc
Confidence 9999999999987 468888888766553321 23467886 9999999999999988877653
No 33
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.64 E-value=1e-15 Score=111.13 Aligned_cols=83 Identities=22% Similarity=0.274 Sum_probs=71.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+.+++++||+..++|+|++..|++||++|++++.+.++ + .+.+++||++++|+|++|++.|.++++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~----~---~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l 110 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNG----I---VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFV 110 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTT----C---EEEEETTEEEEECTTCCCEEEECSSSCEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECCC----e---EEEeCCCCEEEECCCCEEEeEeCCCCCEEEE
Confidence 45788899999999999999966899999999999987212 2 6999999999999999999999999999999
Q ss_pred EEEcCCCCce
Q 048538 135 AALSSQNPGV 144 (181)
Q Consensus 135 ~v~~~~~~g~ 144 (181)
+++.....++
T Consensus 111 ~v~~p~~~~~ 120 (125)
T 3h8u_A 111 SVVAPGNAGF 120 (125)
T ss_dssp EEEESTTCCC
T ss_pred EEECCCcccc
Confidence 9988655544
No 34
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.62 E-value=4e-15 Score=113.21 Aligned_cols=88 Identities=15% Similarity=0.182 Sum_probs=72.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCC-CCeeEeEEecCCcEEEEcCCCeEEEEeCC-CCcEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNEL-NNTLIAKVLKKGDVFVFPIGLIHFQFNIG-KTNAV 132 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~-~~~~~~~~l~~GD~i~ip~g~~H~~~N~g-~~~~~ 132 (181)
.+.+.+++++||...++|+|+ ..|++||++|++++.+++...+ .++...+.+++||++++|+|++|+++|.+ +++++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHS-CEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEES-SCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeECC-CCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 577888999999999999998 8899999999999998641000 00114799999999999999999999999 89999
Q ss_pred EEEEEcCCCCc
Q 048538 133 AIAALSSQNPG 143 (181)
Q Consensus 133 ~l~v~~~~~~g 143 (181)
+++++......
T Consensus 119 ~l~i~~~~~~~ 129 (163)
T 1lr5_A 119 VLVIISRPPAK 129 (163)
T ss_dssp EEEEEESSSCC
T ss_pred EEEEECCCCcc
Confidence 99988755433
No 35
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.62 E-value=2e-15 Score=105.58 Aligned_cols=77 Identities=18% Similarity=0.257 Sum_probs=67.2
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+.+++++||+..++|.|++..|++||++|++++.+++ + ...+.+++||++++|+|++|++.|.++++++++
T Consensus 17 ~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~-----g-~~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l 90 (97)
T 2fqp_A 17 RVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPE-----G-SVTSQLTRGVSYTRPEGVEHNVINPSDTEFVFV 90 (97)
T ss_dssp SEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETT-----E-EEEEEECTTCCEEECTTCEEEEECCSSSCEEEE
T ss_pred eEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCC-----C-CEEEEEcCCCEEEeCCCCcccCEeCCCCcEEEE
Confidence 6778889999999999999995457999999999998752 1 036999999999999999999999999999998
Q ss_pred EEE
Q 048538 135 AAL 137 (181)
Q Consensus 135 ~v~ 137 (181)
.+-
T Consensus 91 ~v~ 93 (97)
T 2fqp_A 91 EIE 93 (97)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 36
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.61 E-value=5.8e-15 Score=112.08 Aligned_cols=83 Identities=19% Similarity=0.192 Sum_probs=72.1
Q ss_pred ceEEEEEEEcCCC-cCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCC-CeEEEEeCCCCcEE
Q 048538 55 GISAVRIDYAPYG-QNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIG-LIHFQFNIGKTNAV 132 (181)
Q Consensus 55 ~~~~~~v~l~pg~-~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g-~~H~~~N~g~~~~~ 132 (181)
.+.+.+++++||+ ..++|||....|++||++|++++.+++ + .+.+++||++++|+| ++|++.|.++++++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~------~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~ 116 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMEN------D--QYPIAPGDFVGFPCHAAAHSISNDGTETLV 116 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETT------E--EEEECTTCEEEECTTSCCEEEECCSSSCEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECC------E--EEEeCCCCEEEECCCCceEEeEeCCCCCEE
Confidence 6788889999999 589999954899999999999998752 2 699999999999998 99999999999999
Q ss_pred EEEEEcCCCCcee
Q 048538 133 AIAALSSQNPGVI 145 (181)
Q Consensus 133 ~l~v~~~~~~g~~ 145 (181)
++++.+...+...
T Consensus 117 ~l~v~~p~~~~~~ 129 (162)
T 3l2h_A 117 CLVIGQRLDQDVV 129 (162)
T ss_dssp EEEEEECCSEEEE
T ss_pred EEEEECCCCCCeE
Confidence 9999886654433
No 37
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.59 E-value=5.3e-14 Score=108.12 Aligned_cols=78 Identities=15% Similarity=0.127 Sum_probs=70.6
Q ss_pred CceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCC-CCcEE
Q 048538 54 LGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIG-KTNAV 132 (181)
Q Consensus 54 ~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g-~~~~~ 132 (181)
..+.+.+++++||+..++|+|+ ..|++||++|++++.+++ + .+.+++||++++|+|++|+++|.+ +++++
T Consensus 54 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~~i~~------~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 124 (167)
T 3ibm_A 54 PAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAEVVLDD------R--VEPLTPLDCVYIAPHAWHQIHATGANEPLG 124 (167)
T ss_dssp SSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEEEEETT------E--EEEECTTCEEEECTTCCEEEEEESSSCCEE
T ss_pred CcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEEEEECC------E--EEEECCCCEEEECCCCcEEEEeCCCCCCEE
Confidence 3678888999999999999999 899999999999998852 2 799999999999999999999999 99999
Q ss_pred EEEEEcCC
Q 048538 133 AIAALSSQ 140 (181)
Q Consensus 133 ~l~v~~~~ 140 (181)
+++++...
T Consensus 125 ~l~i~~~~ 132 (167)
T 3ibm_A 125 FLCIVDSD 132 (167)
T ss_dssp EEEEEESS
T ss_pred EEEEEeCC
Confidence 99988744
No 38
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.58 E-value=1.2e-14 Score=101.01 Aligned_cols=77 Identities=18% Similarity=0.141 Sum_probs=68.5
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
++.+..++++||...++|+|++..|++||++|++++.+++ ..+.+++||++++|+|++|.+.|.++++++++
T Consensus 27 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~~--------~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~ 98 (105)
T 1v70_A 27 RMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGE--------EEALLAPGMAAFAPAGAPHGVRNESASPALLL 98 (105)
T ss_dssp TEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEETT--------EEEEECTTCEEEECTTSCEEEECCSSSCEEEE
T ss_pred ceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEECC--------EEEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 5778889999999999999995578999999999998742 26999999999999999999999999999999
Q ss_pred EEEcC
Q 048538 135 AALSS 139 (181)
Q Consensus 135 ~v~~~ 139 (181)
+++..
T Consensus 99 ~v~~p 103 (105)
T 1v70_A 99 VVTAP 103 (105)
T ss_dssp EEEES
T ss_pred EEeCC
Confidence 88763
No 39
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.57 E-value=9.2e-15 Score=113.29 Aligned_cols=81 Identities=19% Similarity=0.197 Sum_probs=72.4
Q ss_pred CceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 048538 54 LGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVA 133 (181)
Q Consensus 54 ~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~ 133 (181)
.+..+.+++++||+..++|.|. ..|++|||+|++++.++++ + .+.|++||++ +|+|++|+++|.+++++++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~-~eE~~~VLeGel~l~ld~g----e---~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~ 147 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTN-SIDYGIVLEGEIELELDDG----A---KRTVRQGGII-VQRGTNHLWRNTTDKPCRI 147 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCS-EEEEEEEEESCEEEECGGG----C---EEEECTTCEE-EECSCCBEEECCSSSCEEE
T ss_pred CCeEEEEEEECCCCCCCCeecC-ceEEEEEEeCEEEEEECCC----e---EEEECCCCEE-EeCCCcEEEEeCCCCCEEE
Confidence 3778888999999999999999 8999999999999987522 2 6999999999 9999999999999999999
Q ss_pred EEEEcCCCCc
Q 048538 134 IAALSSQNPG 143 (181)
Q Consensus 134 l~v~~~~~~g 143 (181)
+++++...+-
T Consensus 148 l~V~~P~~p~ 157 (172)
T 3es1_A 148 AFILIEAPAY 157 (172)
T ss_dssp EEEEEECCCC
T ss_pred EEEEcCCCce
Confidence 9999877664
No 40
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.57 E-value=2.5e-14 Score=109.43 Aligned_cols=83 Identities=18% Similarity=0.167 Sum_probs=72.2
Q ss_pred ceEEEEEEEcCCCcC-CCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCC--CeEEEEeCCCCcE
Q 048538 55 GISAVRIDYAPYGQN-PPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIG--LIHFQFNIGKTNA 131 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~-~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g--~~H~~~N~g~~~~ 131 (181)
.+.+.+++++||+.. ++|+|...+|++||++|++++.+++ + .+.|++||++++|+| ++|+++|.+++++
T Consensus 42 ~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~------~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~ 113 (163)
T 3i7d_A 42 QFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQ------G--EHPMVPGDCAAFPAGDPNGHQFVNRTDAPA 113 (163)
T ss_dssp SEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETT------E--EEEECTTCEEEECTTCCCCBEEECCSSSCE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECC------E--EEEeCCCCEEEECCCCCcceEEEECCCCCE
Confidence 678889999999965 8999994479999999999999852 2 699999999999999 9999999999999
Q ss_pred EEEEEEcCCCCcee
Q 048538 132 VAIAALSSQNPGVI 145 (181)
Q Consensus 132 ~~l~v~~~~~~g~~ 145 (181)
+++++.+.......
T Consensus 114 ~~l~v~~p~~~d~~ 127 (163)
T 3i7d_A 114 TFLVVGTRTPTETA 127 (163)
T ss_dssp EEEEEEECCSCEEE
T ss_pred EEEEEECCCCCCcc
Confidence 99999886654443
No 41
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.56 E-value=5.1e-14 Score=105.64 Aligned_cols=84 Identities=15% Similarity=0.132 Sum_probs=69.6
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+.+++++||...++|+|+...|++||++|++++.+++... .....+.+++||++++|+|++|+++|.++++++++
T Consensus 42 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~--~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l 119 (148)
T 2oa2_A 42 HLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQD--NLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLY 119 (148)
T ss_dssp SCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTT--BCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEE
T ss_pred ceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccc--cceeeEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 5677888999999999999995679999999999999863210 00012899999999999999999999999999999
Q ss_pred EEEcCC
Q 048538 135 AALSSQ 140 (181)
Q Consensus 135 ~v~~~~ 140 (181)
+++...
T Consensus 120 ~i~~~~ 125 (148)
T 2oa2_A 120 SIYAPP 125 (148)
T ss_dssp EEEESC
T ss_pred EEECCC
Confidence 887644
No 42
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.56 E-value=1.8e-14 Score=106.47 Aligned_cols=80 Identities=19% Similarity=0.249 Sum_probs=70.8
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEE--EEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVG--FVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAV 132 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~--v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~ 132 (181)
.+.+..++++||+..++|+|+ ..|++||++|++++. ++ + ..+.+++||++++|+|++|.++|.++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~~------~--~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~ 108 (145)
T 3ht1_A 38 RFVLTEFEVSPNGSTPPHFHE-WEHEIYVLEGSMGLVLPDQ------G--RTEEVGPGEAIFIPRGEPHGFVTGPGQTCR 108 (145)
T ss_dssp SEEEEEEEEEEEEECCCEECS-SCEEEEEEEECEEEEEGGG------T--EEEEECTTCEEEECTTCCBEEECCTTCCEE
T ss_pred cEEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEeEC------C--EEEEECCCCEEEECCCCeEEeEcCCCCCEE
Confidence 678888999999999999999 788899999999998 53 2 279999999999999999999999999999
Q ss_pred EEEEEcCCCCc
Q 048538 133 AIAALSSQNPG 143 (181)
Q Consensus 133 ~l~v~~~~~~g 143 (181)
+++++....+.
T Consensus 109 ~l~i~~~~~~~ 119 (145)
T 3ht1_A 109 FLVVAPCERPP 119 (145)
T ss_dssp EEEEEESCCCC
T ss_pred EEEEECCCCCC
Confidence 99988765443
No 43
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.55 E-value=3.3e-15 Score=105.43 Aligned_cols=77 Identities=17% Similarity=0.165 Sum_probs=66.7
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+.+++++||+..++|+|++..|++||++|++++...+ +......+++||++++|+|+.|++.|.|++++++|
T Consensus 16 ~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d-----~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~I 90 (98)
T 3lag_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPD-----GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFL 90 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTT-----SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEE
T ss_pred eEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCC-----CceEEEEecCCcEEEEcCCCcEECEECCCCeEEEE
Confidence 6789999999999999999997788899999999987642 22235679999999999999999999999999999
Q ss_pred EE
Q 048538 135 AA 136 (181)
Q Consensus 135 ~v 136 (181)
.|
T Consensus 91 eV 92 (98)
T 3lag_A 91 EI 92 (98)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 44
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.54 E-value=6.9e-14 Score=109.05 Aligned_cols=79 Identities=18% Similarity=0.191 Sum_probs=68.1
Q ss_pred CceEEEEEEEcCCCcCC---CccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeC-CCC
Q 048538 54 LGISAVRIDYAPYGQNP---PHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNI-GKT 129 (181)
Q Consensus 54 ~~~~~~~v~l~pg~~~~---~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~-g~~ 129 (181)
..+.+.+++++||+..+ +|+|+ +.|++||++|++++.+++. +....+.|++||++++|++++|+++|. +++
T Consensus 115 ~~~~~~~~~~~pg~~~~~~~~h~h~-~~E~~~Vl~G~~~~~~~~~----~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~ 189 (198)
T 2bnm_A 115 PSLVPLVVDVLTDNPDDAKFNSGHA-GNEFLFVLEGEIHMKWGDK----ENPKEALLPTGASMFVEEHVPHAFTAAKGTG 189 (198)
T ss_dssp TTCEEEEEEECCCCGGGCCCCCCCS-SCEEEEEEESCEEEEESCT----TSCEEEEECTTCEEEECTTCCEEEEESTTSC
T ss_pred CcceEEEEEEcCCCCCcccccccCC-CeEEEEEEeeeEEEEECCc----CCcccEEECCCCEEEeCCCCceEEEecCCCC
Confidence 36788889999999875 79999 7999999999999998631 111379999999999999999999999 999
Q ss_pred cEEEEEEE
Q 048538 130 NAVAIAAL 137 (181)
Q Consensus 130 ~~~~l~v~ 137 (181)
++++++++
T Consensus 190 ~~~~l~v~ 197 (198)
T 2bnm_A 190 SAKLIAVN 197 (198)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEe
Confidence 99999875
No 45
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.53 E-value=6.5e-14 Score=98.84 Aligned_cols=79 Identities=19% Similarity=0.174 Sum_probs=69.5
Q ss_pred CceEEEEEEEcCCCcCCCc--cCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcE
Q 048538 54 LGISAVRIDYAPYGQNPPH--THPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNA 131 (181)
Q Consensus 54 ~~~~~~~v~l~pg~~~~~H--~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~ 131 (181)
..+.+.+++++||...++| +|++..|++||++|++++.++ ++ .+.+++||++++|+|++|++.|.+++++
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~------~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~ 90 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVD------GH--TQALQAGSLIAIERGQAHEIRNTGDTPL 90 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEET------TE--EEEECTTEEEEECTTCCEEEECCSSSCE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEEC------CE--EEEeCCCCEEEECCCCcEEeEcCCCCCE
Confidence 3677888999999998888 998679999999999999874 22 6999999999999999999999999999
Q ss_pred EEEEEEcCC
Q 048538 132 VAIAALSSQ 140 (181)
Q Consensus 132 ~~l~v~~~~ 140 (181)
++++++...
T Consensus 91 ~~~~v~~~~ 99 (113)
T 2gu9_A 91 KTVNFYHPP 99 (113)
T ss_dssp EEEEEEESC
T ss_pred EEEEEECCC
Confidence 999887643
No 46
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.53 E-value=4.5e-14 Score=107.62 Aligned_cols=77 Identities=10% Similarity=-0.000 Sum_probs=70.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+..++++||+..++|+|+ ..|++||++|++++.+++ + .+.+++||++++|+|++|.+.|.++++++++
T Consensus 43 ~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~v~v~g------~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l 113 (156)
T 3kgz_A 43 ACEWRYFEVDEGGYSTLERHA-HVHAVMIHRGHGQCLVGE------T--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFL 113 (156)
T ss_dssp SEEEEEEEEEEEEECCCBBCS-SCEEEEEEEEEEEEEETT------E--EEEEETTCEEEECTTCCEEEECCSSSCEEEE
T ss_pred cEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEECC------E--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 677888999999999999999 789999999999999752 2 6999999999999999999999999999999
Q ss_pred EEEcCC
Q 048538 135 AALSSQ 140 (181)
Q Consensus 135 ~v~~~~ 140 (181)
+++...
T Consensus 114 ~i~~~~ 119 (156)
T 3kgz_A 114 CVVNAA 119 (156)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 988744
No 47
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.52 E-value=3.6e-14 Score=102.28 Aligned_cols=71 Identities=20% Similarity=0.283 Sum_probs=61.8
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+.+++++||...++|+|+ ..|++||++|++++.+++ + .+.|++||.+++|+|++|+++|.++..+.++
T Consensus 35 ~~~v~~~~l~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~~------~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~ 105 (114)
T 3fjs_A 35 RLEVMRMVLPAGKQVGSHSVA-GPSTIQCLEGEVEIGVDG------A--QRRLHQGDLLYLGAGAAHDVNAITNTSLLVT 105 (114)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SCEEEEEEESCEEEEETT------E--EEEECTTEEEEECTTCCEEEEESSSEEEEEE
T ss_pred CEEEEEEEECCCCccCceeCC-CcEEEEEEECEEEEEECC------E--EEEECCCCEEEECCCCcEEEEeCCCcEEEEE
Confidence 678889999999999999999 789999999999998852 2 6999999999999999999999865444443
No 48
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.52 E-value=2.5e-14 Score=103.71 Aligned_cols=76 Identities=22% Similarity=0.373 Sum_probs=67.9
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
++.+.+++++||...++|+|+ ..|++||++|++++.+++ + .+.+++||++++|+|++|.+.|.++ +++++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~------~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l 109 (126)
T 4e2g_A 40 NLMLNWVRIEPNTEMPAHEHP-HEQAGVMLEGTLELTIGE------E--TRVLRPGMAYTIPGGVRHRARTFED-GCLVL 109 (126)
T ss_dssp SCEEEEEEECTTCEEEEECCS-SEEEEEEEEECEEEEETT------E--EEEECTTEEEEECTTCCEEEECCTT-CEEEE
T ss_pred CeEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEECC------E--EEEeCCCCEEEECCCCcEEeEECCC-CEEEE
Confidence 567888999999999999999 799999999999998842 2 6999999999999999999999987 89999
Q ss_pred EEEcCC
Q 048538 135 AALSSQ 140 (181)
Q Consensus 135 ~v~~~~ 140 (181)
.++...
T Consensus 110 ~v~~p~ 115 (126)
T 4e2g_A 110 DIFSPP 115 (126)
T ss_dssp EEEESC
T ss_pred EEECCC
Confidence 887754
No 49
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.51 E-value=1.2e-13 Score=99.01 Aligned_cols=75 Identities=15% Similarity=0.165 Sum_probs=66.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeE-EecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAK-VLKKGDVFVFPIGLIHFQFNIGKTNAVA 133 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~-~l~~GD~i~ip~g~~H~~~N~g~~~~~~ 133 (181)
.+.+.+++++||...++|+|+ ..|++||++|++++.+++ + .+ .+++||++++|+|++|+++|.+++++++
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~~-----~---~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~ 96 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSN-SYVHLIIIKGEMTLTLED-----Q---EPHNYKEGNIVYVPFNVKMLIQNINSDILEF 96 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECS-SCEEEEEEESEEEEEETT-----S---CCEEEETTCEEEECTTCEEEEECCSSSEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCC-CcEEEEEEeCEEEEEECC-----E---EEEEeCCCCEEEECCCCcEEeEcCCCCCEEE
Confidence 456778899999999999998 899999999999998852 2 47 9999999999999999999999999998
Q ss_pred EEEEc
Q 048538 134 IAALS 138 (181)
Q Consensus 134 l~v~~ 138 (181)
+++..
T Consensus 97 l~i~~ 101 (117)
T 2b8m_A 97 FVVKA 101 (117)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88744
No 50
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.51 E-value=2.8e-13 Score=101.80 Aligned_cols=77 Identities=23% Similarity=0.355 Sum_probs=69.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEe-EEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIA-KVLKKGDVFVFPIGLIHFQFNIGKTNAVA 133 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~-~~l~~GD~i~ip~g~~H~~~N~g~~~~~~ 133 (181)
.+.+.+++++||...++|+|+ ..|++||++|++++.+++ + . +.+++||++++|+|++|++.|.+++++++
T Consensus 47 ~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~------~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 117 (147)
T 2f4p_A 47 NTQVYDVVFEPGARTHWHSHP-GGQILIVTRGKGFYQERG------K--PARILKKGDVVEIPPNVVHWHGAAPDEELVH 117 (147)
T ss_dssp SCEEEEEEECTTCEECSEECT-TCEEEEEEEEEEEEEETT------S--CCEEEETTCEEEECTTCCEEEEEBTTBCEEE
T ss_pred cEEEEEEEECCCCccCceECC-CceEEEEEeCEEEEEECC------E--EEEEECCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 678889999999999999999 699999999999998752 1 4 89999999999999999999999999999
Q ss_pred EEEEcCC
Q 048538 134 IAALSSQ 140 (181)
Q Consensus 134 l~v~~~~ 140 (181)
+++....
T Consensus 118 l~v~~~~ 124 (147)
T 2f4p_A 118 IGISTQV 124 (147)
T ss_dssp EEEECCG
T ss_pred EEEEccC
Confidence 9887643
No 51
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.51 E-value=6.1e-14 Score=107.93 Aligned_cols=77 Identities=10% Similarity=0.020 Sum_probs=69.7
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+.+++++||+..++|+|+ ..|++||++|++++.+++ + .+.+++||++++|+|++|.+.|.++++++++
T Consensus 52 ~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~~v~g------~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l 122 (166)
T 3jzv_A 52 TGELRYFEVGPGGHSTLERHQ-HAHGVMILKGRGHAMVGR------A--VSAVAPYDLVTIPGWSWHQFRAPADEALGFL 122 (166)
T ss_dssp SEEEEEEEEEEEEECCCBBCS-SCEEEEEEEECEEEEETT------E--EEEECTTCEEEECTTCCEEEECCTTSCEEEE
T ss_pred eEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEECC------E--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 677888999999999999999 789999999999998752 2 6999999999999999999999999999999
Q ss_pred EEEcCC
Q 048538 135 AALSSQ 140 (181)
Q Consensus 135 ~v~~~~ 140 (181)
+++...
T Consensus 123 ~i~~~~ 128 (166)
T 3jzv_A 123 CMVNAE 128 (166)
T ss_dssp EEEESS
T ss_pred EEEccC
Confidence 988743
No 52
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.51 E-value=6.9e-13 Score=103.88 Aligned_cols=83 Identities=17% Similarity=0.176 Sum_probs=70.6
Q ss_pred ceEEEEEEEcCCCc------CCCccCCC--CcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeC
Q 048538 55 GISAVRIDYAPYGQ------NPPHTHPR--ATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNI 126 (181)
Q Consensus 55 ~~~~~~v~l~pg~~------~~~H~H~~--~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~ 126 (181)
.+.+.+++++||+. .++|+|+. ..|++||++|++.+.+++.. ++...+.+++||++++|+|++|++.|.
T Consensus 66 ~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~---g~~~~~~l~~GD~v~ip~g~~H~~~N~ 142 (190)
T 1x82_A 66 DLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPE---GDAKWISMEPGTVVYVPPYWAHRTVNI 142 (190)
T ss_dssp CEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTT---CCEEEEEECTTCEEEECTTCEEEEEEC
T ss_pred CeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcC---CcEEEEEECCCcEEEECCCCeEEEEEC
Confidence 67788889999998 78999983 47999999999999987532 122348999999999999999999999
Q ss_pred CCCcEEEEEEEcCC
Q 048538 127 GKTNAVAIAALSSQ 140 (181)
Q Consensus 127 g~~~~~~l~v~~~~ 140 (181)
+++++++++++...
T Consensus 143 g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 143 GDEPFIFLAIYPAD 156 (190)
T ss_dssp SSSCEEEEEEEETT
T ss_pred CcccEEEEEEECCC
Confidence 99999999887743
No 53
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.49 E-value=2.7e-13 Score=96.73 Aligned_cols=76 Identities=25% Similarity=0.309 Sum_probs=66.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+..++++||...++|+|+ ..|++||++|++++.++ ++ .+.+++||++++|+|++|.+.|.+ +++++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~------~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l 101 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNVD------GV--IKVLTAGDSFFVPPHVDHGAVCPT--GGILI 101 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEET------TE--EEEECTTCEEEECTTCCEEEEESS--CEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEEC------CE--EEEeCCCCEEEECcCCceeeEeCC--CcEEE
Confidence 467888999999999999999 89999999999999874 22 699999999999999999999986 67888
Q ss_pred EEEcCCC
Q 048538 135 AALSSQN 141 (181)
Q Consensus 135 ~v~~~~~ 141 (181)
+++....
T Consensus 102 ~v~~p~~ 108 (116)
T 2pfw_A 102 DTFSPAR 108 (116)
T ss_dssp EEEESCC
T ss_pred EEECCch
Confidence 8876543
No 54
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.49 E-value=1.2e-13 Score=101.92 Aligned_cols=76 Identities=22% Similarity=0.149 Sum_probs=67.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+.+++++||...++|+|++..|++||++|++++.+++ ..+.|++||++++|+|++|++.|.++++++++
T Consensus 56 ~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~--------~~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l 127 (133)
T 1o4t_A 56 ARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDNG--------KDVPIKAGDVCFTDSGESHSIENTGNTDLEFL 127 (133)
T ss_dssp EEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEETT--------EEEEEETTEEEEECTTCEEEEECCSSSCEEEE
T ss_pred eEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEECC--------EEEEeCCCcEEEECCCCcEEeEECCCCCEEEE
Confidence 4567789999999989999984589999999999998752 26999999999999999999999999999999
Q ss_pred EEEc
Q 048538 135 AALS 138 (181)
Q Consensus 135 ~v~~ 138 (181)
++..
T Consensus 128 ~v~~ 131 (133)
T 1o4t_A 128 AVII 131 (133)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8753
No 55
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.48 E-value=1.8e-13 Score=99.93 Aligned_cols=75 Identities=19% Similarity=0.139 Sum_probs=68.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
++.+.+++++||...++|+|+ ..|++||++|++++.+++ + .+.+++||++++|+|++|++.|.++++++++
T Consensus 47 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~~-----~---~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l 117 (126)
T 1vj2_A 47 NFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLKEQ-----G---EETVEEGFYIFVEPNEIHGFRNDTDSEVEFL 117 (126)
T ss_dssp SEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEECSS-----C---EEEEETTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEECC-----E---EEEECCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 678888999999999999999 899999999999998752 2 6999999999999999999999999999999
Q ss_pred EEEc
Q 048538 135 AALS 138 (181)
Q Consensus 135 ~v~~ 138 (181)
+++.
T Consensus 118 ~v~~ 121 (126)
T 1vj2_A 118 CLIP 121 (126)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 8765
No 56
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.47 E-value=1.3e-13 Score=111.90 Aligned_cols=83 Identities=14% Similarity=0.091 Sum_probs=68.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEE--------Eecc---CCC-CeeEeEEecCCcEEEEcCCCeEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGF--------VTSN---ELN-NTLIAKVLKKGDVFVFPIGLIHF 122 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v--------~~~~---~~~-~~~~~~~l~~GD~i~ip~g~~H~ 122 (181)
.+.+.+++++||+..++|+|++..|++||++|++++.+ ++.. ..| ++...+.+++||++++|+|++|.
T Consensus 42 ~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~ 121 (239)
T 2xlg_A 42 GFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHG 121 (239)
T ss_dssp EEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEE
T ss_pred CEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEE
Confidence 56788899999999999999988999999999999988 3210 000 01126889999999999999999
Q ss_pred EEeCCCCcEEE-EEEE
Q 048538 123 QFNIGKTNAVA-IAAL 137 (181)
Q Consensus 123 ~~N~g~~~~~~-l~v~ 137 (181)
++|.+++++++ ++++
T Consensus 122 ~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 122 FVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EECCSSSCEEEEEEEE
T ss_pred EEeCCCCCEEEEEEEE
Confidence 99999999998 6666
No 57
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.47 E-value=1.9e-13 Score=105.21 Aligned_cols=76 Identities=17% Similarity=0.073 Sum_probs=64.6
Q ss_pred ceEEEEEEEcC-CCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 048538 55 GISAVRIDYAP-YGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVA 133 (181)
Q Consensus 55 ~~~~~~v~l~p-g~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~ 133 (181)
.+...+++++| |+...+|.|..++|++||++|++++++++ ..+.|++||++++|++.+|.++|.+++++++
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g--------~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arl 158 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCK--------NKFLSVKGSTFQIPAFNEYAIANRGNDEAKM 158 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETT--------EEEEEETTCEEEECTTCEEEEEECSSSCEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEECC--------EEEEEcCCCEEEECCCCCEEEEECCCCCEEE
Confidence 45677899999 77666654444899999999999999852 2699999999999999999999999999999
Q ss_pred EEEEc
Q 048538 134 IAALS 138 (181)
Q Consensus 134 l~v~~ 138 (181)
+++..
T Consensus 159 l~Vq~ 163 (166)
T 2vpv_A 159 FFVQV 163 (166)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98753
No 58
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.46 E-value=6.4e-14 Score=98.94 Aligned_cols=78 Identities=17% Similarity=0.153 Sum_probs=64.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+.+++++||+..++|.|+...+++|+++|++++... + ++.....+++||++++|+|+.|++.|.|+++++++
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~-d----G~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi 90 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAP-D----GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFL 90 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECT-T----SCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeC-C----CcEEEEEECCCCEEEECCCCceeCEECCCCCEEEE
Confidence 678899999999999999999665666778998888652 1 11124689999999999999999999999999999
Q ss_pred EEE
Q 048538 135 AAL 137 (181)
Q Consensus 135 ~v~ 137 (181)
.+-
T Consensus 91 ~vE 93 (98)
T 2ozi_A 91 EIE 93 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 59
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.46 E-value=5.1e-13 Score=96.95 Aligned_cols=75 Identities=15% Similarity=0.213 Sum_probs=67.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+..++++||...++|||. ..|++||++|++++.+++ + .+.+++||++++|+|++|.+.|.++++++++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~Ei~~v~~G~~~~~i~~------~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~ 103 (128)
T 4i4a_A 33 PFGGAWCIVRPETKSFRHSHN-EYELFIVIQGNAIIRIND------E--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFY 103 (128)
T ss_dssp SSEEEEEEECTTEECCCBCCS-SEEEEEEEESEEEEEETT------E--EEEEETTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred CcEEEEEEECCCCccCCEecC-CeEEEEEEeCEEEEEECC------E--EEEECCCcEEEECCCCcEEeEeCCCCCEEEE
Confidence 467788899999999999998 999999999999998852 2 6999999999999999999999999999888
Q ss_pred EEEc
Q 048538 135 AALS 138 (181)
Q Consensus 135 ~v~~ 138 (181)
+++-
T Consensus 104 ~i~f 107 (128)
T 4i4a_A 104 TIWW 107 (128)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 60
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.45 E-value=6.7e-13 Score=103.15 Aligned_cols=75 Identities=20% Similarity=0.188 Sum_probs=65.3
Q ss_pred ceEEEEEEEcCCCcCC--CccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 048538 55 GISAVRIDYAPYGQNP--PHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAV 132 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~--~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~ 132 (181)
.+.+..++++||...+ +|+|. ..|++||++|++++.+++ ..+.|++||++++|++++|+++|.+++++
T Consensus 103 ~~~~~~~~~~pg~~~~~~~H~h~-~~E~~~Vl~G~~~~~~~~--------~~~~l~~GD~i~i~~~~~H~~~n~~~~~~- 172 (192)
T 1y9q_A 103 GLEIFEITLLDHHQQMSSPHALG-VIEYIHVLEGIMKVFFDE--------QWHELQQGEHIRFFSDQPHGYAAVTEKAV- 172 (192)
T ss_dssp TEEEEEEEECTTCEEEECCCSTT-CEEEEEEEESCEEEEETT--------EEEEECTTCEEEEECSSSEEEEESSSCEE-
T ss_pred cEEEEEEEECCCCCccCCCCCCC-CEEEEEEEEeEEEEEECC--------EEEEeCCCCEEEEcCCCCeEeECCCCCcE-
Confidence 6778889999998765 78887 899999999999998852 26999999999999999999999999999
Q ss_pred EEEEEcC
Q 048538 133 AIAALSS 139 (181)
Q Consensus 133 ~l~v~~~ 139 (181)
+++++..
T Consensus 173 ~l~v~~~ 179 (192)
T 1y9q_A 173 FQNIVAY 179 (192)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 8877653
No 61
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.44 E-value=5.4e-13 Score=94.97 Aligned_cols=74 Identities=12% Similarity=0.250 Sum_probs=64.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
++.+.+++++||...++|+|+ ..|++||++|++++.++ ++ .+.+++||++++|+|++|++.|.+ +++++
T Consensus 39 ~~~~~~~~~~~g~~~~~H~H~-~~e~~~vl~G~~~~~~~------~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~~ 107 (115)
T 1yhf_A 39 DLGITVFSLDKGQEIGRHSSP-GDAMVTILSGLAEITID------QE--TYRVAEGQTIVMPAGIPHALYAVE--AFQML 107 (115)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEESEEEEEET------TE--EEEEETTCEEEECTTSCEEEEESS--CEEEE
T ss_pred ceEEEEEEECCCCccCCEECC-CcEEEEEEeCEEEEEEC------CE--EEEECCCCEEEECCCCCEEEEECC--CceEE
Confidence 567788999999999999999 89999999999999874 22 699999999999999999999986 57777
Q ss_pred EEEcC
Q 048538 135 AALSS 139 (181)
Q Consensus 135 ~v~~~ 139 (181)
+++..
T Consensus 108 ~v~~~ 112 (115)
T 1yhf_A 108 LVVVK 112 (115)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 66543
No 62
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.44 E-value=2.9e-13 Score=109.53 Aligned_cols=81 Identities=14% Similarity=0.076 Sum_probs=70.4
Q ss_pred ceEEEEEEEcC-CCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 048538 55 GISAVRIDYAP-YGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVA 133 (181)
Q Consensus 55 ~~~~~~v~l~p-g~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~ 133 (181)
.+.+.+++++| |+..++|+|+ ..|++||++|++++.+++ + .+.+++||++++|+|++|.++|.+++++++
T Consensus 144 ~~~~~~~~~~p~g~~~~~H~H~-~~e~~~Vl~G~~~~~i~~------~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 214 (243)
T 3h7j_A 144 WVEIMLAKIPGNGGEMPFHKHR-NEQIGICIGGGYDMTVEG------C--TVEMKFGTAYFCEPREDHGAINRSEKESKS 214 (243)
T ss_dssp TEEEEEEEECTTTEEEEEECCS-SEEEEEECSSCEEEEETT------E--EEEECTTCEEEECTTCCEEEEECSSSCEEE
T ss_pred eeEEEEEEECCCCCcCCCEeCC-CcEEEEEEECEEEEEECC------E--EEEECCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 35667788999 8888999999 789999999999998852 2 689999999999999999999999999999
Q ss_pred EEEEcCCCCce
Q 048538 134 IAALSSQNPGV 144 (181)
Q Consensus 134 l~v~~~~~~g~ 144 (181)
+.+++.....+
T Consensus 215 l~v~~p~~~d~ 225 (243)
T 3h7j_A 215 INIFFPPRYNR 225 (243)
T ss_dssp EEEEESCSSCC
T ss_pred EEEEcCChhcc
Confidence 99988544333
No 63
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.41 E-value=4.9e-12 Score=104.00 Aligned_cols=75 Identities=11% Similarity=0.154 Sum_probs=67.4
Q ss_pred ceEEEEEEEcCCCcCCC-ccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCC-CcEE
Q 048538 55 GISAVRIDYAPYGQNPP-HTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGK-TNAV 132 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~-H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~-~~~~ 132 (181)
.+.+.+++++||+..++ |+|. ..|++||++|++++.+++ + .+.|++||++++|++++|+++|.++ ++++
T Consensus 181 ~~~~~~~~l~pg~~~~~~H~H~-~~E~~yVl~G~~~~~i~~------~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~ 251 (274)
T 1sef_A 181 DMNMHILSFEPGASHAYIETHV-QEHGAYLISGQGMYNLDN------E--WYPVEKGDYIFMSAYVPQAAYAVGREEPLM 251 (274)
T ss_dssp SEEEEEEEECTTCBCSSCBCCS-CCEEEEEEECEEEEEETT------E--EEEEETTCEEEECTTCCEEEEEECSSSCEE
T ss_pred CEEEEEEEECCCCccCcceecc-CeEEEEEEeCEEEEEECC------E--EEEECCCCEEEECCCCCEEEEeCCCCCCEE
Confidence 67788899999999888 9998 899999999999999852 2 6999999999999999999999998 8999
Q ss_pred EEEEEc
Q 048538 133 AIAALS 138 (181)
Q Consensus 133 ~l~v~~ 138 (181)
++++.+
T Consensus 252 ~l~~~~ 257 (274)
T 1sef_A 252 YVYSKD 257 (274)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 887654
No 64
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.41 E-value=1.3e-12 Score=94.76 Aligned_cols=77 Identities=12% Similarity=0.084 Sum_probs=65.6
Q ss_pred ceEEEEEEEcCCCcCC-CccCCCCcEEE-EEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 048538 55 GISAVRIDYAPYGQNP-PHTHPRATDIL-AVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAV 132 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~-~H~H~~~~E~~-yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~ 132 (181)
++.+..++++||...+ +|+|+ ..|++ ||++|++++.+++ + .+.+++||++++|+|++|++.|.++++++
T Consensus 25 ~~~~~~~~~~pg~~~~~~H~H~-~~e~~~~vl~G~~~~~i~~------~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~ 95 (125)
T 3cew_A 25 GAEVSINHLPAGAGVPFVHSHK-QNEEIYGILSGKGFITIDG------E--KIELQAGDWLRIAPDGKRQISAASDSPIG 95 (125)
T ss_dssp SCEEEEEEECTTCBCSSEEEES-SEEEEEEEEEEEEEEEETT------E--EEEEETTEEEEECTTCCEEEEEBTTBCEE
T ss_pred CcEEEEEEECCCCCCCCCccCC-CceEEEEEEeCEEEEEECC------E--EEEeCCCCEEEECCCCcEEEEcCCCCCEE
Confidence 5678888999999888 89999 66555 5999999998852 2 69999999999999999999999889999
Q ss_pred EEEEEcCC
Q 048538 133 AIAALSSQ 140 (181)
Q Consensus 133 ~l~v~~~~ 140 (181)
+++++...
T Consensus 96 ~~~i~~~~ 103 (125)
T 3cew_A 96 FLCIQVKA 103 (125)
T ss_dssp EEEEEEET
T ss_pred EEEEEcCC
Confidence 88876643
No 65
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.41 E-value=9.4e-13 Score=96.48 Aligned_cols=77 Identities=18% Similarity=0.174 Sum_probs=58.4
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAAL 137 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~ 137 (181)
+.++.++||...++|+|+...|++||++|++++.+++ + ..+.+++||++++|+|++|++.|.++ ++++++++
T Consensus 45 ~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~-----~--~~~~l~~Gd~~~ip~g~~H~~~~~~~-~~~~l~~~ 116 (134)
T 2o8q_A 45 VIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYED-----I--GAVMLEAGGSAFQPPGVRHRELRHSD-DLEVLEIV 116 (134)
T ss_dssp EEEECC-----CCCEEECCSCEEEEEEESEEEEEETT-----T--EEEEEETTCEEECCTTCCEEEEEECT-TCEEEEEE
T ss_pred EEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECC-----c--EEEEecCCCEEEECCCCcEEeEeCCC-CeEEEEEE
Confidence 4445556888899999994499999999999998852 1 27999999999999999999999876 46888777
Q ss_pred cCCCC
Q 048538 138 SSQNP 142 (181)
Q Consensus 138 ~~~~~ 142 (181)
.....
T Consensus 117 ~p~~~ 121 (134)
T 2o8q_A 117 SPAGF 121 (134)
T ss_dssp SSTTC
T ss_pred CCCch
Confidence 65443
No 66
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.40 E-value=1.8e-12 Score=92.40 Aligned_cols=73 Identities=14% Similarity=0.096 Sum_probs=62.7
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+..+.++||...++|+|+ ..|++||++|++++.+++ + .+.|++||++++|+|++|.++|. ++++++
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~-~~e~~~vl~G~~~~~i~~------~--~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~ 105 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYF-GDTLYLILQGEAVITFDD------Q--KIDLVPEDVLMVPAHKIHAIAGK--GRFKML 105 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCS-SCEEEEEEEEEEEEEETT------E--EEEECTTCEEEECTTCCBEEEEE--EEEEEE
T ss_pred CceEEEEEECCCCccccEECC-CCeEEEEEeCEEEEEECC------E--EEEecCCCEEEECCCCcEEEEeC--CCcEEE
Confidence 355677788999999999999 899999999999998852 2 69999999999999999999996 577777
Q ss_pred EEEc
Q 048538 135 AALS 138 (181)
Q Consensus 135 ~v~~ 138 (181)
++..
T Consensus 106 ~i~~ 109 (114)
T 2ozj_A 106 QITL 109 (114)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 67
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.40 E-value=7.7e-13 Score=107.97 Aligned_cols=76 Identities=14% Similarity=0.119 Sum_probs=65.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCC-CcEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGK-TNAVA 133 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~-~~~~~ 133 (181)
.+.+.+++++||+..++|+|....|++||++|++++.+++ + .+.+++||++++|++++|+++|.++ +++++
T Consensus 178 ~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~-----~---~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~ 249 (261)
T 1rc6_A 178 DMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDN-----N---WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSY 249 (261)
T ss_dssp SEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSS-----C---EEEEETTCEEEECSSEEEEEEEC----CEEE
T ss_pred ceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEECC-----E---EEEeCCCCEEEECCCCcEEeEeCCCCcCEEE
Confidence 6778899999999999999976789999999999998752 2 6999999999999999999999999 99999
Q ss_pred EEEEc
Q 048538 134 IAALS 138 (181)
Q Consensus 134 l~v~~ 138 (181)
+++.+
T Consensus 250 l~~~d 254 (261)
T 1rc6_A 250 IYSKD 254 (261)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 87654
No 68
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.37 E-value=1.8e-12 Score=94.44 Aligned_cols=74 Identities=20% Similarity=0.150 Sum_probs=62.5
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+..++++||....+|. ..+|++|||+|++++.++ + ..+.|++||+++||+|+.|++.|.+ ++++++
T Consensus 39 ~~~~~~~~~~pG~~~~~H~--~~~E~~~Vl~G~~~~~~~------g--~~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l 107 (119)
T 3lwc_A 39 PITIGYGRYAPGQSLTETM--AVDDVMIVLEGRLSVSTD------G--ETVTAGPGEIVYMPKGETVTIRSHE-EGALTA 107 (119)
T ss_dssp CCEEEEEEECTTCEEEEEC--SSEEEEEEEEEEEEEEET------T--EEEEECTTCEEEECTTCEEEEEEEE-EEEEEE
T ss_pred CEEEEEEEECCCCCcCccC--CCCEEEEEEeCEEEEEEC------C--EEEEECCCCEEEECCCCEEEEEcCC-CCeEEE
Confidence 5778889999998776664 489999999999999884 2 2699999999999999999998875 788888
Q ss_pred EEEcC
Q 048538 135 AALSS 139 (181)
Q Consensus 135 ~v~~~ 139 (181)
.+.+.
T Consensus 108 ~v~~P 112 (119)
T 3lwc_A 108 YVTYP 112 (119)
T ss_dssp EEEEC
T ss_pred EEECC
Confidence 87663
No 69
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.37 E-value=1.9e-11 Score=99.11 Aligned_cols=77 Identities=14% Similarity=0.140 Sum_probs=67.7
Q ss_pred cCceEEEEEEEcCCCcCCC-ccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcE
Q 048538 53 TLGISAVRIDYAPYGQNPP-HTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNA 131 (181)
Q Consensus 53 ~~~~~~~~v~l~pg~~~~~-H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~ 131 (181)
...+.+.+++++||+..+. |.|. .+|.+|||+|++++.+++ + .+.|++||+++++++.+|+++|.|++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h~-~ee~~~vLeG~~~~~~~~------~--~~~l~~GD~~~~~~~~pH~~~n~g~~~~ 232 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVHY-MEHGLLMLEGEGLYKLEE------N--YYPVTAGDIIWMGAHCPQWYGALGRNWS 232 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCS-SCEEEEEEECEEEEEETT------E--EEEEETTCEEEECTTCCEEEEEESSSCE
T ss_pred CCCeEEEEEEECCCCccCcccCCC-ceEEEEEEECEEEEEECC------E--EEEcCCCCEEEECCCCCEEEEcCCCCCE
Confidence 3477889999999999886 5566 889999999999998752 2 6999999999999999999999999999
Q ss_pred EEEEEEc
Q 048538 132 VAIAALS 138 (181)
Q Consensus 132 ~~l~v~~ 138 (181)
+++.+-+
T Consensus 233 ~yl~~kd 239 (246)
T 1sfn_A 233 KYLLYKD 239 (246)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9998765
No 70
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.36 E-value=3.8e-12 Score=89.48 Aligned_cols=75 Identities=19% Similarity=0.206 Sum_probs=62.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEE-EEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDI-LAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVA 133 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~-~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~ 133 (181)
.+.+.+++++||...++|+|+...|+ +||++|++++.++++ ..+.+++||++++|+|++|++.|.++ +++
T Consensus 32 ~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~-------~~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~ 102 (110)
T 2q30_A 32 NFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDGD-------AVIPAPRGAVLVAPISTPHGVRAVTD--MKV 102 (110)
T ss_dssp SCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGGG-------CEEEECTTEEEEEETTSCEEEEESSS--EEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCCC-------EEEEECCCCEEEeCCCCcEEEEEcCC--cEE
Confidence 56778889999999999999944687 899999999987411 16999999999999999999999765 566
Q ss_pred EEEEc
Q 048538 134 IAALS 138 (181)
Q Consensus 134 l~v~~ 138 (181)
+.+++
T Consensus 103 l~~~~ 107 (110)
T 2q30_A 103 LVTIA 107 (110)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 66655
No 71
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.34 E-value=2.6e-12 Score=106.16 Aligned_cols=75 Identities=20% Similarity=0.205 Sum_probs=66.9
Q ss_pred ceEEEEEEEcCCCcC--CCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 048538 55 GISAVRIDYAPYGQN--PPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAV 132 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~--~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~ 132 (181)
.+.+.+++++||+.. ++|.|. .+|++||++|++++.+++ + ++.|++||++++|+|++|.++|.++++++
T Consensus 67 ~~~~~~~~l~PG~~~~~~~h~H~-~eE~~~Vl~G~l~v~v~g-----~---~~~L~~GD~i~ip~~~~H~~~N~g~~~~~ 137 (278)
T 1sq4_A 67 TFSQYIVELAPNGGSDKPEQDPN-AEAVLFVVEGELSLTLQG-----Q---VHAMQPGGYAFIPPGADYKVRNTTGQHTR 137 (278)
T ss_dssp SCEEEEEEEEEEEEESSCCCCTT-EEEEEEEEESCEEEEESS-----C---EEEECTTEEEEECTTCCEEEECCSSSCEE
T ss_pred cEEEEEEEECCCCccCCCCcCCC-ceEEEEEEeCEEEEEECC-----E---EEEECCCCEEEECCCCcEEEEECCCCCEE
Confidence 678889999999875 567788 899999999999999852 2 69999999999999999999999999999
Q ss_pred EEEEEc
Q 048538 133 AIAALS 138 (181)
Q Consensus 133 ~l~v~~ 138 (181)
++++..
T Consensus 138 ~l~v~~ 143 (278)
T 1sq4_A 138 FHWIRK 143 (278)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 998875
No 72
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.33 E-value=2.7e-12 Score=103.75 Aligned_cols=73 Identities=18% Similarity=0.146 Sum_probs=65.1
Q ss_pred EEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEE-EcCCCeEEEEeCCCCcEEEEE
Q 048538 57 SAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFV-FPIGLIHFQFNIGKTNAVAIA 135 (181)
Q Consensus 57 ~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~-ip~g~~H~~~N~g~~~~~~l~ 135 (181)
.+..++++||...++|+|+ ..|++||++|++++.+++ + .+.+++||+++ +|+|++|.++|.++++++++.
T Consensus 35 ~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~~~~------~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~ 105 (243)
T 3h7j_A 35 EVLMSYVPPHTNVEPHQHK-EVQIGMVVSGELMMTVGD------V--TRKMTALESAYIAPPHVPHGARNDTDQEVIAID 105 (243)
T ss_dssp EEEEEEECTTEEEEEECCS-SEEEEEEEESEEEEEETT------E--EEEEETTTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred EEEEEEECCCCccCCEECC-CcEEEEEEEeEEEEEECC------E--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEE
Confidence 4666779999999999999 899999999999998842 2 69999999996 999999999999999999998
Q ss_pred EEc
Q 048538 136 ALS 138 (181)
Q Consensus 136 v~~ 138 (181)
+..
T Consensus 106 i~r 108 (243)
T 3h7j_A 106 IKR 108 (243)
T ss_dssp EEE
T ss_pred Eec
Confidence 754
No 73
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.33 E-value=3.2e-12 Score=109.05 Aligned_cols=76 Identities=18% Similarity=0.158 Sum_probs=67.7
Q ss_pred CceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEE-EEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 048538 54 LGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYV-GFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAV 132 (181)
Q Consensus 54 ~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~-~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~ 132 (181)
..+.+..++++||...++|+|. ..|++||++|++++ .++ + .++.+++||++++|+|++|.+.|.++++++
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~-~~e~~yVl~G~g~~t~v~------g--~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~ 168 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHN-QSALRFIVEGKGAFTAVD------G--ERTPMNEGDFILTPQWRWHDHGNPGDEPVI 168 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEEEEECSSCEEEET------T--EEEECCTTCEEEECTTSCEEEECCSSSCEE
T ss_pred CcEEEEEEEECCCCCcCCeecC-cceEEEEEEEEEEEEEEC------C--EEEEEcCCCEEEECCCCcEEeEeCCCCCEE
Confidence 3578889999999999999999 88999999999988 543 2 269999999999999999999999999999
Q ss_pred EEEEEc
Q 048538 133 AIAALS 138 (181)
Q Consensus 133 ~l~v~~ 138 (181)
++++.+
T Consensus 169 ~l~v~d 174 (354)
T 2d40_A 169 WLDGLD 174 (354)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 998865
No 74
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.32 E-value=7.2e-12 Score=104.66 Aligned_cols=78 Identities=19% Similarity=0.151 Sum_probs=68.6
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+.++++.||+..++|||.+..|++||++|++++.+++ + .+.|++||++++|+|++|.+.|.++ +++++
T Consensus 45 ~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~------~--~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~ 115 (337)
T 1y3t_A 45 LFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDG------E--RYLLISGDYANIPAGTPHSYRMQSH-RTRLV 115 (337)
T ss_dssp SEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEETT------E--EEEECTTCEEEECTTCCEEEEECST-TEEEE
T ss_pred eEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEECC------E--EEEECCCCEEEECCCCcEEEEECCC-CeEEE
Confidence 6778889999999999999987899999999999998742 2 6999999999999999999999987 68898
Q ss_pred EEEcCCC
Q 048538 135 AALSSQN 141 (181)
Q Consensus 135 ~v~~~~~ 141 (181)
++++...
T Consensus 116 ~~~~p~~ 122 (337)
T 1y3t_A 116 SYTMKGN 122 (337)
T ss_dssp EEEETTS
T ss_pred EEECCCC
Confidence 8876543
No 75
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.31 E-value=6.6e-12 Score=100.06 Aligned_cols=80 Identities=13% Similarity=0.098 Sum_probs=70.3
Q ss_pred ccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcE
Q 048538 52 NTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNA 131 (181)
Q Consensus 52 ~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~ 131 (181)
....+.+..+.+.||...|+|.|+ .+|++|||+|++++.++++ ....+++||++++|+|++|++++ +++|+
T Consensus 128 ~s~~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v~~g-------~~~~l~pGd~v~ipsgv~Ha~rt-~dePl 198 (217)
T 4b29_A 128 LTQSLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHLRNA-------PDLMLEPGQTRFHPANAPHAMTT-LTDPI 198 (217)
T ss_dssp ECSSCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEETTS-------CCEEECTTCEEEECTTCCEEEEC-CSSCE
T ss_pred CCCeEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEECCC-------CEEecCCCCEEEcCCCCceeEEE-CCccE
Confidence 344788999999999999999999 8999999999999988522 26999999999999999999985 78999
Q ss_pred EEEEEEcCC
Q 048538 132 VAIAALSSQ 140 (181)
Q Consensus 132 ~~l~v~~~~ 140 (181)
..++++...
T Consensus 199 lalwvW~G~ 207 (217)
T 4b29_A 199 LTLVLWRGA 207 (217)
T ss_dssp EEEEEEEST
T ss_pred EEEEEEeCC
Confidence 988888754
No 76
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.31 E-value=2e-12 Score=87.89 Aligned_cols=62 Identities=27% Similarity=0.208 Sum_probs=57.3
Q ss_pred cCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEecc
Q 048538 34 NRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSN 96 (181)
Q Consensus 34 ~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~ 96 (181)
|..|. ++.++..++|++++.++++.++.+.||++.+||||+++.|++||++|++.++++++.
T Consensus 15 n~~G~-~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~ 76 (79)
T 1dgw_X 15 NNYGK-LYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLE 76 (79)
T ss_dssp CSSEE-EEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC
T ss_pred CCCCc-EEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCC
Confidence 55565 799999999999999999999999999999999999999999999999999998763
No 77
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.31 E-value=1.5e-11 Score=88.19 Aligned_cols=74 Identities=20% Similarity=0.246 Sum_probs=57.8
Q ss_pred ceEEEEEEEcCCCcCCC---ccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEe--EEecCCcEEEEcCCCeEEEEeCCCC
Q 048538 55 GISAVRIDYAPYGQNPP---HTHPRATDILAVLEGTLYVGFVTSNELNNTLIA--KVLKKGDVFVFPIGLIHFQFNIGKT 129 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~---H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~--~~l~~GD~i~ip~g~~H~~~N~g~~ 129 (181)
++.+.++. .+|...++ |.|. ..|++||++|++++.+++ + . +.|++||++++|+|++|++.|.+++
T Consensus 30 ~~~i~~i~-~~g~~~~~~~~~~~~-~~E~~~Vl~G~~~l~~~~------~--~~~~~l~~Gd~i~ipa~~~H~~~n~~~~ 99 (112)
T 2opk_A 30 GLKIERII-SNGQASPPGFWYDSP-QDEWVMVVSGSAGIECEG------D--TAPRVMRPGDWLHVPAHCRHRVAWTDGG 99 (112)
T ss_dssp TEEEEEEE-ESSCCCCTTCCBCCS-SEEEEEEEESCEEEEETT------C--SSCEEECTTEEEEECTTCCEEEEEECSS
T ss_pred CEEEEEEE-eCCccCCCCccccCC-ccEEEEEEeCeEEEEECC------E--EEEEEECCCCEEEECCCCcEEEEeCCCC
Confidence 44555554 45655444 5566 899999999999999852 2 4 8999999999999999999999875
Q ss_pred -cEEEEEEEc
Q 048538 130 -NAVAIAALS 138 (181)
Q Consensus 130 -~~~~l~v~~ 138 (181)
++.+++++.
T Consensus 100 ~~~~~l~v~~ 109 (112)
T 2opk_A 100 EPTVWLAVHC 109 (112)
T ss_dssp SCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 677777765
No 78
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.31 E-value=2.5e-11 Score=92.51 Aligned_cols=93 Identities=16% Similarity=0.006 Sum_probs=67.5
Q ss_pred CCCCCCccCCCeEEEEeecC--CCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEe--CeEEEEEEeccCCCCee
Q 048538 27 DEPKNAANRLGFSVKIANVE--QIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLE--GTLYVGFVTSNELNNTL 102 (181)
Q Consensus 27 ~~~~~~~~~~g~~~~~~~~~--~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~--G~~~~~v~~~~~~~~~~ 102 (181)
+++.+. ...+|..+..... ++|. ++..+ .++...++|||....|++|||+ |++++.+++ +
T Consensus 23 ~ei~~~-~~~~G~srR~l~~~~~fp~------sv~~v--~~g~~~~~H~H~~~~E~~yVLe~~G~g~v~idg------e- 86 (157)
T 4h7l_A 23 SEIEAV-ACPCGWAQRAFGHDAGTSV------SVHYT--QITKAARTHYHREHQEIYVVLDHAAHATIELNG------Q- 86 (157)
T ss_dssp TTSCCE-EETTEEEEEESCGGGCCSC------EEEEE--EECSCCCCBBCSSCEEEEEEEEECTTCEEEETT------E-
T ss_pred hhCCCc-cCCCCeeeEEeEcCCCCcE------EEEEE--eCCCCccceECCCCcEEEEEEecCcEEEEEECC------E-
Confidence 344433 5556655554443 3342 33333 3455678999986789999999 999999852 2
Q ss_pred EeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCC
Q 048538 103 IAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSSQ 140 (181)
Q Consensus 103 ~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~ 140 (181)
.+.+++||+++||+|+.|++.+ +++++++++..
T Consensus 87 -~~~l~~GD~v~IPpg~~H~i~g----~l~~L~I~~Pp 119 (157)
T 4h7l_A 87 -SYPLTKLLAISIPPLVRHRIVG----EATIINIVSPP 119 (157)
T ss_dssp -EEECCTTEEEEECTTCCEEEES----CEEEEEEEESS
T ss_pred -EEEeCCCCEEEECCCCeEeeEC----CEEEEEEECCC
Confidence 6999999999999999999973 69999988743
No 79
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.30 E-value=3.8e-11 Score=98.76 Aligned_cols=76 Identities=17% Similarity=0.124 Sum_probs=66.9
Q ss_pred cCceEEEEEEEcCCCcCCC-ccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcE
Q 048538 53 TLGISAVRIDYAPYGQNPP-HTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNA 131 (181)
Q Consensus 53 ~~~~~~~~v~l~pg~~~~~-H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~ 131 (181)
+..+.+.+++++||+..+. |.|. .++.+|||+|++.+.+++ + .+.+++||+++++++++|++.|.|++++
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~-~eh~~~vL~G~g~y~l~~------~--~~~V~~GD~i~~~~~~~h~~~n~G~e~~ 253 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHY-NQHGLLLLEGQGIYRLGD------N--WYPVQAGDVIWMAPFVPQWYAALGKTRS 253 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCS-CCEEEEEEECEEEEEETT------E--EEEEETTCEEEECTTCCEEEEEESSSCE
T ss_pred ccceEEEEEEECCCcCcCCceEcc-cceEEEEEeceEEEEECC------E--EEEecCCCEEEECCCCcEEEEeCCCCCE
Confidence 3478889999999999986 6777 779999999999998752 2 7999999999999999999999999999
Q ss_pred EEEEEE
Q 048538 132 VAIAAL 137 (181)
Q Consensus 132 ~~l~v~ 137 (181)
++|.--
T Consensus 254 ~yl~yk 259 (266)
T 4e2q_A 254 RYLLYK 259 (266)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 998643
No 80
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.30 E-value=5.2e-12 Score=93.75 Aligned_cols=72 Identities=21% Similarity=0.086 Sum_probs=60.5
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+..++++|| ..|||...+|++|||+|++++.++ + ..+.|++||++++|+|.+|.+.| +++++++
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~~-g-------~~~~l~~GD~i~~p~g~~h~~~~--~~~~~~l 122 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRHE-G-------ETMIAKAGDVMFIPKGSSIEFGT--PTSVRFL 122 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEET-T-------EEEEEETTCEEEECTTCEEEEEE--EEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEEC-C-------EEEEECCCcEEEECCCCEEEEEe--CCCEEEE
Confidence 567888999999 356665589999999999999874 2 26899999999999999999997 4678988
Q ss_pred EEEcC
Q 048538 135 AALSS 139 (181)
Q Consensus 135 ~v~~~ 139 (181)
+++..
T Consensus 123 ~v~~p 127 (133)
T 2pyt_A 123 YVAWP 127 (133)
T ss_dssp EEEES
T ss_pred EEEcC
Confidence 88764
No 81
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.29 E-value=5.6e-12 Score=102.82 Aligned_cols=76 Identities=13% Similarity=0.101 Sum_probs=65.1
Q ss_pred ceEEEEEEEcCCCcCCCcc-CCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 048538 55 GISAVRIDYAPYGQNPPHT-HPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVA 133 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~-H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~ 133 (181)
.+.+.+++++||+....|. |.+.+|++||++|++++.+++ + .+.|++||++++|++.+|.++|.+++++++
T Consensus 58 ~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~------~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~ 129 (261)
T 1rc6_A 58 SFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEG------K--TFALSEGGYLYCPPGSLMTFVNAQAEDSQI 129 (261)
T ss_dssp SSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEETT------E--EEEEETTEEEEECTTCCCEEEECSSSCEEE
T ss_pred cEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEECC------E--EEEECCCCEEEECCCCCEEEEeCCCCCEEE
Confidence 5678889999998765554 344679999999999999852 2 699999999999999999999999999999
Q ss_pred EEEEc
Q 048538 134 IAALS 138 (181)
Q Consensus 134 l~v~~ 138 (181)
+++..
T Consensus 130 l~v~~ 134 (261)
T 1rc6_A 130 FLYKR 134 (261)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99875
No 82
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.27 E-value=4.1e-11 Score=100.07 Aligned_cols=75 Identities=19% Similarity=0.120 Sum_probs=63.0
Q ss_pred EEEEEEcC-CCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 048538 58 AVRIDYAP-YGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAA 136 (181)
Q Consensus 58 ~~~v~l~p-g~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v 136 (181)
...+.+.| |...++|+|++..|++||++|++++.+++ ..+.+++||++++|++++|+++|.++ +++++++
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i~~--------~~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v 289 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWTDG--------QEIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGV 289 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEETT--------EEEEECTTCEEEECTTCCEEEEECSS-SEEEEEE
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEECC--------EEEEECCCCEEEECCCCeEEEEECCC-CeEEEEE
Confidence 34455655 66778999986699999999999999852 26999999999999999999999988 8999998
Q ss_pred EcCCC
Q 048538 137 LSSQN 141 (181)
Q Consensus 137 ~~~~~ 141 (181)
++...
T Consensus 290 ~~~~~ 294 (337)
T 1y3t_A 290 LVPGL 294 (337)
T ss_dssp EESST
T ss_pred EcCcc
Confidence 87553
No 83
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.27 E-value=7e-11 Score=102.11 Aligned_cols=94 Identities=18% Similarity=0.097 Sum_probs=75.3
Q ss_pred CCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEE
Q 048538 36 LGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVF 115 (181)
Q Consensus 36 ~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~i 115 (181)
.++....+......+-....+.+....++||...++|.|. ..+++||++|++.+.++ + +++.+++||++++
T Consensus 274 ~~~~~l~l~nP~~g~~~~~tl~~~~~~l~PG~~~~~HrH~-~~~v~~VleG~G~~~V~------g--e~~~~~~GD~~~i 344 (394)
T 3bu7_A 274 YDGLILRYTNPQTGGHPMLTMGASMQMLRPGEHTKAHRHT-GNVIYNVAKGQGYSIVG------G--KRFDWSEHDIFCV 344 (394)
T ss_dssp TTBEEEEECCTTTSSCSSSSCEEEEEEECTTCBCCCEEES-SCEEEEEEECCEEEEET------T--EEEEECTTCEEEE
T ss_pred CCceEEEEeCCCCCCCCCCeeeEEEEEECCCCcCCCcccC-CcEEEEEEeCeEEEEEC------C--EEEEEeCCCEEEE
Confidence 3444455544443322234678888999999999999999 78999999999988874 2 2799999999999
Q ss_pred cCCCeEEEEeCC-CCcEEEEEEEc
Q 048538 116 PIGLIHFQFNIG-KTNAVAIAALS 138 (181)
Q Consensus 116 p~g~~H~~~N~g-~~~~~~l~v~~ 138 (181)
|+|..|.+.|.+ +++++++++.+
T Consensus 345 P~g~~H~~~N~g~~e~~~ll~i~D 368 (394)
T 3bu7_A 345 PAWTWHEHCNTQERDDACLFSFND 368 (394)
T ss_dssp CTTCCEEEEECCSSCCEEEEEEES
T ss_pred CCCCeEEeEeCCCCCCeEEEEeeC
Confidence 999999999998 79999998855
No 84
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.27 E-value=1.3e-11 Score=98.77 Aligned_cols=74 Identities=19% Similarity=0.214 Sum_probs=64.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+.+++++||...++|+|+ ..|++||++|++++.+++ + .+.+++||++++|+|++|+++|. .++++++
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~g------~--~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~l 221 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAP-GDALVTVLDGEGKYYVDG------K--PFIVKKGESAVLPANIPHAVEAE-TENFKML 221 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEEEEEEEEETT------E--EEEEETTEEEEECTTSCEEEECC-SSCEEEE
T ss_pred CeEEEEEEECCCCccCCEECC-CcEEEEEEeEEEEEEECC------E--EEEECCCCEEEECCCCcEEEEeC-CCCEEEE
Confidence 567888999999999999999 899999999999998852 2 69999999999999999999993 4667777
Q ss_pred EEEc
Q 048538 135 AALS 138 (181)
Q Consensus 135 ~v~~ 138 (181)
.++.
T Consensus 222 l~~v 225 (227)
T 3rns_A 222 LILV 225 (227)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6653
No 85
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.27 E-value=2.1e-11 Score=100.29 Aligned_cols=74 Identities=12% Similarity=0.078 Sum_probs=64.4
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+.+++++||+..+.|.|. ++|++||++|++++.++++ + .+.|++||++++|++..|+++|. ++++++
T Consensus 69 ~f~~~lv~l~PGg~s~~~~h~-~EEfiyVleG~l~l~l~~g----~---~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l 138 (266)
T 4e2q_A 69 HFVMYLAKMKEMSSSGLPPQD-IERLIFVVEGAVTLTNTSS----S---SKKLTVDSYAYLPPNFHHSLDCV--ESATLV 138 (266)
T ss_dssp SSEEEEEEECSSEECCCCCTT-EEEEEEEEEECEEEEC--C----C---CEEECTTEEEEECTTCCCEEEES--SCEEEE
T ss_pred cEEEEEEEECcCCcCCCCCCC-CeEEEEEEEEEEEEEECCC----c---EEEEcCCCEEEECCCCCEEEEeC--CCEEEE
Confidence 678889999999998888787 9999999999999998512 2 69999999999999999999994 789999
Q ss_pred EEEc
Q 048538 135 AALS 138 (181)
Q Consensus 135 ~v~~ 138 (181)
++..
T Consensus 139 ~V~k 142 (266)
T 4e2q_A 139 VFER 142 (266)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8855
No 86
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.26 E-value=9.9e-12 Score=102.18 Aligned_cols=76 Identities=13% Similarity=0.121 Sum_probs=64.8
Q ss_pred ceEEEEEEEcCCCcCCCcc-CCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 048538 55 GISAVRIDYAPYGQNPPHT-HPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVA 133 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~-H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~ 133 (181)
.+.+.+++++||+....|. |.+.+|++||++|++++.+++ + .+.|++||++++|++++|.++|.+++++++
T Consensus 61 ~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~-----~---~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~ 132 (274)
T 1sef_A 61 TFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQ-----E---THELEAGGYAYFTPEMKMYLANAQEADTEV 132 (274)
T ss_dssp SSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECSS-----C---EEEEETTEEEEECTTSCCEEEESSSSCEEE
T ss_pred cEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEECC-----E---EEEECCCCEEEECCCCCEEEEeCCCCCEEE
Confidence 5678889999998765443 444689999999999998852 2 699999999999999999999999999999
Q ss_pred EEEEc
Q 048538 134 IAALS 138 (181)
Q Consensus 134 l~v~~ 138 (181)
+++..
T Consensus 133 l~v~~ 137 (274)
T 1sef_A 133 FLYKK 137 (274)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99874
No 87
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.26 E-value=6e-11 Score=100.92 Aligned_cols=82 Identities=17% Similarity=0.170 Sum_probs=64.4
Q ss_pred ceEEEEEEEcCCCc-CC--CccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcE
Q 048538 55 GISAVRIDYAPYGQ-NP--PHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNA 131 (181)
Q Consensus 55 ~~~~~~v~l~pg~~-~~--~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~ 131 (181)
.+.+. ..+.|++. .+ +|+|....|++||++|++++.+++.+ +....+.|++||++++|+|++|+++|.++++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~---g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~- 121 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGN---ETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT- 121 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETT---SCCEEEEEETTCEEEECTTEEEEEEECSTTE-
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcC---CceEEEEECCCCEEEECCCCcEEEEeCCCCC-
Confidence 44555 45566654 45 89998789999999999999997521 2224799999999999999999999998776
Q ss_pred EEEEEEcCCC
Q 048538 132 VAIAALSSQN 141 (181)
Q Consensus 132 ~~l~v~~~~~ 141 (181)
+++++++...
T Consensus 122 ~~l~v~~p~~ 131 (350)
T 1juh_A 122 EMTGVIVPGG 131 (350)
T ss_dssp EEEEEEESSC
T ss_pred EEEEEEcCcc
Confidence 8888777543
No 88
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.25 E-value=1.3e-11 Score=86.99 Aligned_cols=69 Identities=17% Similarity=0.221 Sum_probs=54.3
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAA 136 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v 136 (181)
..++.+.||. .++|+|+...|++||++|++++.+++. + .+.+++||++++|+|++|++.|. ++++++.+
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~~~-----~--~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i 98 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFADG-----G--SMTIREGEMAVVPKSVSHRPRSE--NGCSLVLI 98 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEETTS-----C--EEEECTTEEEEECTTCCEEEEEE--EEEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEECCC-----c--EEEECCCCEEEECCCCcEeeEeC--CCeEEEEE
Confidence 3446677886 459999944999999999999988531 2 69999999999999999999994 46777654
No 89
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.25 E-value=3.5e-11 Score=91.24 Aligned_cols=74 Identities=14% Similarity=0.008 Sum_probs=59.9
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+++..+++. ++. .|||...+|++|||+|++++.++ + ..+.+++||+++||+|+.|++.|. ++++++
T Consensus 65 ~~s~g~~~~e-~~~--~~~~~~~eE~~yVLeG~~~l~i~------g--~~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l 131 (151)
T 4axo_A 65 RLGCGMMEMK-ETT--FDWTLNYDEIDYVIDGTLDIIID------G--RKVSASSGELIFIPKGSKIQFSVP--DYARFI 131 (151)
T ss_dssp SCEEEEEEEE-EEE--EEEECSSEEEEEEEEEEEEEEET------T--EEEEEETTCEEEECTTCEEEEEEE--EEEEEE
T ss_pred cEEEEEEEEc-Ccc--ccEeCCCcEEEEEEEeEEEEEEC------C--EEEEEcCCCEEEECCCCEEEEEeC--CCEEEE
Confidence 5677777776 433 45555588999999999999973 2 279999999999999999999997 789999
Q ss_pred EEEcCCC
Q 048538 135 AALSSQN 141 (181)
Q Consensus 135 ~v~~~~~ 141 (181)
++.+...
T Consensus 132 ~V~~P~~ 138 (151)
T 4axo_A 132 YVTYPAD 138 (151)
T ss_dssp EEEECSC
T ss_pred EEECCCC
Confidence 9887543
No 90
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.24 E-value=3e-11 Score=96.71 Aligned_cols=74 Identities=11% Similarity=-0.041 Sum_probs=65.2
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
+..+.++.++||...++|.|+ .++++||++|++++.+++ + ++.+++||++++|+|++|.++|. ++++++
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~-~~~~~~Vl~G~~~~~i~~-----~---~~~l~~Gd~~~~p~~~~H~~~a~--~~~~~l 104 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAML-GNRYYYCFNGNGEIFIEN-----N---KKTISNGDFLEITANHNYSIEAR--DNLKLI 104 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCS-SCEEEEEEESEEEEEESS-----C---EEEEETTEEEEECSSCCEEEEES--SSEEEE
T ss_pred CcEEEEEEECCCCccCccccC-CCEEEEEEeCEEEEEECC-----E---EEEECCCCEEEECCCCCEEEEEC--CCcEEE
Confidence 457888999999999999999 899999999999999852 2 69999999999999999999996 568888
Q ss_pred EEEcC
Q 048538 135 AALSS 139 (181)
Q Consensus 135 ~v~~~ 139 (181)
++...
T Consensus 105 ~i~~~ 109 (227)
T 3rns_A 105 EIGEK 109 (227)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 87653
No 91
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.23 E-value=4.2e-11 Score=98.95 Aligned_cols=77 Identities=17% Similarity=0.091 Sum_probs=68.0
Q ss_pred cCceEEEEEEEcCCCcCCC-ccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcE
Q 048538 53 TLGISAVRIDYAPYGQNPP-HTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNA 131 (181)
Q Consensus 53 ~~~~~~~~v~l~pg~~~~~-H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~ 131 (181)
...+.+.+++++||+..+. |.|. .+|.+|||+|++++.+++ ..+.|++||+++++++.+|+++|.|++++
T Consensus 188 ~~~~~~~~~~l~pG~~i~~~~~h~-~e~~~~il~G~~~~~~~~--------~~~~v~~GD~~~~~~~~~h~~~n~g~~~~ 258 (278)
T 1sq4_A 188 RHDMHVNIVNFEPGGVIPFAETHV-MEHGLYVLEGKAVYRLNQ--------DWVEVEAGDFMWLRAFCPQACYSGGPGRF 258 (278)
T ss_dssp TCSEEEEEEEECSSSEESCCCCCS-EEEEEEEEECEEEEEETT--------EEEEEETTCEEEEEESCCEEEECCSSSCE
T ss_pred CCCeEEEEEEECCCCCcCCCCCCC-ccEEEEEEeCEEEEEECC--------EEEEeCCCCEEEECCCCCEEEEcCCCCCE
Confidence 4478899999999999987 4555 678999999999998752 27999999999999999999999999999
Q ss_pred EEEEEEc
Q 048538 132 VAIAALS 138 (181)
Q Consensus 132 ~~l~v~~ 138 (181)
+++.+.+
T Consensus 259 ~yl~~~d 265 (278)
T 1sq4_A 259 RYLLYKD 265 (278)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998887
No 92
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=99.21 E-value=3.2e-11 Score=94.92 Aligned_cols=70 Identities=19% Similarity=0.187 Sum_probs=61.0
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 048538 56 ISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIA 135 (181)
Q Consensus 56 ~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~ 135 (181)
..+.+++++||+..+.|+|+ +.|+.|||+|++. +. ...+.+||++++|+|..|...+.+++.|.+++
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~-g~E~~~VL~G~f~----de--------~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~ 191 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHR-GLELTLVLQGAFR----DE--------TDRFGAGDIEIADQELEHTPVAERGLDCICLA 191 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCS-SCEEEEEEESEEE----CS--------SSEEETTCEEEECSSCCCCCEECSSSCEEEEE
T ss_pred cEEEEEEECCCCCCCCcCCC-CeEEEEEEEEEEE----CC--------cEEECCCeEEEeCcCCccCCEeCCCCCEEEEE
Confidence 35678999999999999998 8899999999754 22 36899999999999999999998788999998
Q ss_pred EEc
Q 048538 136 ALS 138 (181)
Q Consensus 136 v~~ 138 (181)
+.+
T Consensus 192 ~~d 194 (195)
T 2q1z_B 192 ATD 194 (195)
T ss_dssp EEC
T ss_pred Eec
Confidence 765
No 93
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.21 E-value=3.1e-11 Score=103.42 Aligned_cols=91 Identities=19% Similarity=0.122 Sum_probs=74.1
Q ss_pred EEEeecCCCCCC--ccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcC
Q 048538 40 VKIANVEQIPGL--NTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPI 117 (181)
Q Consensus 40 ~~~~~~~~~p~l--~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~ 117 (181)
...+......+. .+..+.+....++||...++|.|. ..|+.||++|++.+...++ .++.+++||++++|+
T Consensus 85 ~~~l~nP~~~~~~~~t~~L~a~~~~l~PG~~~~~HrH~-~~ev~~VleG~G~~~~vdG-------~~~~~~~GD~v~iP~ 156 (368)
T 3nw4_A 85 ALGLANPGLGGNAYISPTMWAAIQYLGPRETAPEHRHS-QNAFRFVVEGEGVWTVVNG-------DPVRMSRGDLLLTPG 156 (368)
T ss_dssp EEECCCTTSTTCSCSSSSCEEEEEEECTTCEEEEEEES-SCEEEECSSCEEEEEEETT-------EEEEEETTCEEEECT
T ss_pred EEEEeCCCCCCcCccCCceEEEEEEECCCCccCceecc-cceEEEEEecceEEEEECC-------EEEEEeCCCEEEECC
Confidence 344444444432 234688999999999999999999 7899999999996333322 279999999999999
Q ss_pred CCeEEEEeCCCCcEEEEEEEc
Q 048538 118 GLIHFQFNIGKTNAVAIAALS 138 (181)
Q Consensus 118 g~~H~~~N~g~~~~~~l~v~~ 138 (181)
|..|...|.|+++++++++.+
T Consensus 157 g~~H~~~N~gde~l~~l~v~D 177 (368)
T 3nw4_A 157 WCFHGHMNDTDQPMAWIDGLD 177 (368)
T ss_dssp TCCEEEEECSSSCEEEEEEEC
T ss_pred CCcEEeEeCCCCCeEEEEecc
Confidence 999999999999999999887
No 94
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.20 E-value=9e-11 Score=101.40 Aligned_cols=78 Identities=17% Similarity=0.065 Sum_probs=69.0
Q ss_pred cCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEe-CCCCcE
Q 048538 53 TLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFN-IGKTNA 131 (181)
Q Consensus 53 ~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N-~g~~~~ 131 (181)
+..+.+...+++||...++|.|. ..|+.|||+|++.+...++ .++.+++||++++|+|..|...| .|++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~-~~ev~~IleG~G~~t~v~G-------~~~~~~~GD~i~~P~g~~H~~~N~~gde~l 191 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHA-ASALRFIMEGSGAYTIVDG-------HKVELGANDFVLTPNGTWHEHGILESGTEC 191 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEES-SCEEEEEEECSCEEEEETT-------EEEEECTTCEEEECTTCCEEEEECTTCCCE
T ss_pred CCeeEEEEEEECCCCCcCCccCC-cceEEEEEEeeEEEEEECC-------EEEEEcCCCEEEECcCCCEEEEcCCCCCCE
Confidence 44678899999999999999999 6799999999997744422 27999999999999999999999 999999
Q ss_pred EEEEEEc
Q 048538 132 VAIAALS 138 (181)
Q Consensus 132 ~~l~v~~ 138 (181)
+++++++
T Consensus 192 ~~l~v~d 198 (394)
T 3bu7_A 192 IWQDGLD 198 (394)
T ss_dssp EEEEEEC
T ss_pred EEEEccc
Confidence 9999876
No 95
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=99.18 E-value=2e-10 Score=87.68 Aligned_cols=103 Identities=14% Similarity=0.149 Sum_probs=76.0
Q ss_pred eeeecCCCCC-Cc--cCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCC
Q 048538 22 ICVAIDEPKN-AA--NRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNEL 98 (181)
Q Consensus 22 ~~~~~~~~~~-~~--~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~ 98 (181)
.+...++++| ++ ...|-++.++...... +..+.+++++||+..+.|.|+ +.|.+|||+|++.+. .
T Consensus 10 ~~v~~~~~~W~~~~~~~~Gv~~~~L~~d~~~-----g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~---e--- 77 (159)
T 3ebr_A 10 GCLDGNDTPWMPFAPYSNDVMVKYFKIDPVR-----GETITLLKAPAGMEMPRHHHT-GTVIVYTVQGSWRYK---E--- 77 (159)
T ss_dssp CCCCGGGSCCEECTTTCSSSEEEEEEEETTT-----TEEEEEEEECSSCBCCCEEES-SCEEEEEEESCEEET---T---
T ss_pred EEEcCCcCCcEeCCCCCCCEEEEEeeEcCCC-----CeEEEEEEECCCCCcccccCC-CCEEEEEEEeEEEEe---C---
Confidence 3443345555 21 2345556666533211 456788999999999999999 788899999998862 2
Q ss_pred CCeeEeEEecCCcEEEEcCCCeEEEEeC--CCCcEEEEEEEcCC
Q 048538 99 NNTLIAKVLKKGDVFVFPIGLIHFQFNI--GKTNAVAIAALSSQ 140 (181)
Q Consensus 99 ~~~~~~~~l~~GD~i~ip~g~~H~~~N~--g~~~~~~l~v~~~~ 140 (181)
. ...+++||+++.|+|..|...+. ++++|.++.+.+..
T Consensus 78 -~---~~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~~~~G~ 117 (159)
T 3ebr_A 78 -H---DWVAHAGSVVYETASTRHTPQSAYAEGPDIITFNIVAGE 117 (159)
T ss_dssp -S---SCCBCTTCEEEECSSEEECEEESSSSSSCEEEEEEEESC
T ss_pred -C---CeEECCCeEEEECCCCcceeEeCCCCCCCEEEEEEecCc
Confidence 1 25899999999999999999998 77999988877643
No 96
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.17 E-value=1.9e-10 Score=98.09 Aligned_cols=89 Identities=16% Similarity=0.042 Sum_probs=70.1
Q ss_pred CeEEEEeecC-CCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEE
Q 048538 37 GFSVKIANVE-QIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVF 115 (181)
Q Consensus 37 g~~~~~~~~~-~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~i 115 (181)
|+.+...+.. +.+.+. .+.+....++||...++|+|+ ..|++||++|++++.++ + +++.+++||+++|
T Consensus 250 G~~~~~~np~t~~~~~~--ti~~~~~~l~pG~~~~~H~h~-~~ev~~v~~G~g~~~v~------~--~~~~~~~GD~~~v 318 (354)
T 2d40_A 250 GYKMRYVNPVTGGYPMP--SMGAFLQLLPKGFASRVARTT-DSTIYHVVEGSGQVIIG------N--ETFSFSAKDIFVV 318 (354)
T ss_dssp BEEEEECCTTTSSCSSS--SCEEEEEEECTTCBCCCBEES-SCEEEEEEEEEEEEEET------T--EEEEEETTCEEEE
T ss_pred CeEEEEeCCCcCCCCCC--cceeEEEEECCCCCCCceecC-CcEEEEEEeCeEEEEEC------C--EEEEEcCCCEEEE
Confidence 4533333322 344444 456677899999999999999 56999999999999984 2 2799999999999
Q ss_pred cCCCeEEEEeCCCCcEEEEEEEc
Q 048538 116 PIGLIHFQFNIGKTNAVAIAALS 138 (181)
Q Consensus 116 p~g~~H~~~N~g~~~~~~l~v~~ 138 (181)
|++..|++.|. ++++++++.+
T Consensus 319 P~~~~H~~~n~--e~~~l~~~~d 339 (354)
T 2d40_A 319 PTWHGVSFQTT--QDSVLFSFSD 339 (354)
T ss_dssp CTTCCEEEEEE--EEEEEEEEES
T ss_pred CCCCeEEEEeC--CCEEEEEEcC
Confidence 99999999993 7788887754
No 97
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.15 E-value=1.6e-10 Score=79.99 Aligned_cols=60 Identities=25% Similarity=0.468 Sum_probs=49.8
Q ss_pred CcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 048538 67 GQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAA 136 (181)
Q Consensus 67 ~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v 136 (181)
+..++|+|+...|++||++|++++.+++ + .+.+++||++++|+|++|.+.|. .+++++.+
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~~~-----~---~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i 99 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAFRD-----Q---NITLQAGEMYVIPKGVEHKPMAK--EECKIMII 99 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEECSS-----C---EEEEETTEEEEECTTCCBEEEEE--EEEEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEECC-----E---EEEEcCCCEEEECCCCeEeeEcC--CCCEEEEE
Confidence 3578999994499999999999998752 2 69999999999999999999997 35666544
No 98
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=99.08 E-value=1.4e-10 Score=82.10 Aligned_cols=64 Identities=19% Similarity=0.108 Sum_probs=51.0
Q ss_pred EEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 048538 60 RIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVA 133 (181)
Q Consensus 60 ~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~ 133 (181)
.....||.. ++| |+ ..|++||++|++++.++++ + .+.|++||++++|+|++|.+.|.++....+
T Consensus 35 ~~~~~pg~~-~~h-H~-~~E~~~Vl~G~~~~~i~~g----~---~~~l~~GD~i~ip~g~~H~~~n~~~~~~~y 98 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YD-TNETCYILEGKVEVTTEDG----K---KYVIEKGDLVTFPKGLRCRWKVLEPVRKHY 98 (101)
T ss_dssp EEEECSEEE-EEE-CS-SCEEEEEEEEEEEEEETTC----C---EEEEETTCEEEECTTCEEEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CC-ceEEEEEEeCEEEEEECCC----C---EEEECCCCEEEECCCCcEEEEeCCCeeEEE
Confidence 566788764 356 77 8999999999999988412 2 699999999999999999999976544333
No 99
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=99.07 E-value=2e-09 Score=84.43 Aligned_cols=80 Identities=21% Similarity=0.222 Sum_probs=63.6
Q ss_pred EEEEEEEcCCC----------cCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeC
Q 048538 57 SAVRIDYAPYG----------QNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNI 126 (181)
Q Consensus 57 ~~~~v~l~pg~----------~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~ 126 (181)
....+.+.|+. ..++|+|+ ..|++||++|++.+.+.+.+ ++.....+++||+++||+|++|++.+.
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~-~~Ei~yVleG~G~f~i~d~~---d~~~~i~v~~GDlIiIPaG~~H~f~~~ 150 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHL-DEEIRYILEGSGYFDVRDKE---DKWIRISMEKGDMITLPAGIYHRFTLD 150 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECS-SCEEEEEEEEEEEEEEECTT---SCEEEEEEETTEEEEECTTCCEEEEEC
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECC-cceEEEEEeceEEEEECCCC---CeEEEEEECCCCEEEECcCCcCCcccC
Confidence 45667788875 23899999 79999999999999997531 222246899999999999999999987
Q ss_pred CCCcEEEEEEEcCC
Q 048538 127 GKTNAVAIAALSSQ 140 (181)
Q Consensus 127 g~~~~~~l~v~~~~ 140 (181)
.+..+..+-++...
T Consensus 151 ~~~~~~airlF~~~ 164 (191)
T 1vr3_A 151 EKNYVKAMRLFVGE 164 (191)
T ss_dssp TTCCEEEEEEESSS
T ss_pred CCCCEEEEEEECCC
Confidence 77778888777643
No 100
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.06 E-value=6.9e-10 Score=89.86 Aligned_cols=71 Identities=17% Similarity=0.134 Sum_probs=61.4
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+.+++++||+....|. .+|++||++|++++.+++ + .+.|++||++++|++.+|.++|. ++++++
T Consensus 49 ~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~~~-----~---~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l 115 (246)
T 1sfn_A 49 RFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAVGG-----E---TRTLREYDYVYLPAGEKHMLTAK--TDARVS 115 (246)
T ss_dssp SSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEECSS-----C---EEEECTTEEEEECTTCCCEEEEE--EEEEEE
T ss_pred cEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEECC-----E---EEEECCCCEEEECCCCCEEEEeC--CCEEEE
Confidence 5678889999999877764 789999999999998852 2 69999999999999999999998 788888
Q ss_pred EEEc
Q 048538 135 AALS 138 (181)
Q Consensus 135 ~v~~ 138 (181)
++..
T Consensus 116 ~v~~ 119 (246)
T 1sfn_A 116 VFEK 119 (246)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8763
No 101
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=99.05 E-value=2e-09 Score=82.66 Aligned_cols=75 Identities=24% Similarity=0.248 Sum_probs=61.2
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCC--CCcEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIG--KTNAV 132 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g--~~~~~ 132 (181)
+..+.+++++||+..++|+|+ +.|.+|||+|++... . .. .+.+++||+++.|+|..|...+.. +++|.
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~f~~~---~----~~--~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci 111 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHT-GTVHMYTISGCWYYT---E----YP--GQKQTAGCYLYEPGGSIHQFNTPRDNEGQTE 111 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEES-SCEEEEEEESEEEET---T----CT--TSCEETTEEEEECTTCEECEECCTTCSSCEE
T ss_pred CcEEEEEEECCCCcCCcccCC-CCEEEEEEEEEEEEC---C----Cc--eEEECCCeEEEeCCCCceeeEeCCCCCCCcE
Confidence 456788999999999999999 789999999988862 1 10 367899999999999999998864 34887
Q ss_pred EEEEEcC
Q 048538 133 AIAALSS 139 (181)
Q Consensus 133 ~l~v~~~ 139 (181)
++++.+.
T Consensus 112 ~l~v~~G 118 (165)
T 3cjx_A 112 VIFMLSG 118 (165)
T ss_dssp EEEEEES
T ss_pred EEEEEec
Confidence 7776663
No 102
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=99.01 E-value=4.9e-10 Score=84.04 Aligned_cols=91 Identities=11% Similarity=-0.072 Sum_probs=65.4
Q ss_pred CCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEE
Q 048538 36 LGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVF 115 (181)
Q Consensus 36 ~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~i 115 (181)
.|-+...+...... +-.+.+++++||+..+.|+|+ ..|.+|||+|++.+..+ +....+.+++||++++
T Consensus 29 ~Gv~~~~L~~~~~~-----g~~~~~~~~~pG~~~p~H~H~-~~ee~~VL~G~~~~~~g------~~~~~~~~~~Gd~~~~ 96 (145)
T 2o1q_A 29 GGIRWKLLHVSPEM-----GSWTAIFDCPAGSSFAAHVHV-GPGEYFLTKGKMDVRGG------KAAGGDTAIAPGYGYE 96 (145)
T ss_dssp SCCEEEEEEEETTT-----TEEEEEEEECTTEEECCEEES-SCEEEEEEEEEEEETTC------GGGTSEEEESSEEEEE
T ss_pred CCcEEEEeeECCCc-----ccEEEEEEECCCCCCCccCCC-CCEEEEEEEeEEEEcCC------CEecceEeCCCEEEEE
Confidence 45555555433221 235778999999999999999 66779999999986432 1101278999999999
Q ss_pred cCCCeEE-EEeCCCCcEEEEEEEcCC
Q 048538 116 PIGLIHF-QFNIGKTNAVAIAALSSQ 140 (181)
Q Consensus 116 p~g~~H~-~~N~g~~~~~~l~v~~~~ 140 (181)
|+|..|. ..+ .+++.++.+++.+
T Consensus 97 p~g~~H~p~~~--~e~~~~l~~~~gp 120 (145)
T 2o1q_A 97 SANARHDKTEF--PVASEFYMSFLGP 120 (145)
T ss_dssp CTTCEESCCEE--EEEEEEEEEEESC
T ss_pred CcCCccCCeEC--CCCeEEEEEECCc
Confidence 9999999 444 3567778777654
No 103
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=99.00 E-value=4.5e-10 Score=82.22 Aligned_cols=67 Identities=13% Similarity=0.098 Sum_probs=54.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCc
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTN 130 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~ 130 (181)
.+.+..++..||... +|+|. .+|++|||+|++++.+.+ + ..+.|++||++++|+|.+|.|.|.++..
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~-~~E~~~Vl~G~~~l~~~~-----g--~~~~l~~GD~~~ip~g~~h~~~~~~~~r 114 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTG-YIEYCHIIEGEARLVDPD-----G--TVHAVKAGDAFIMPEGYTGRWEVDRHVK 114 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTT-EEEEEEEEEEEEEEECTT-----C--CEEEEETTCEEEECTTCCCEEEEEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCC-CcEEEEEEEEEEEEEECC-----C--eEEEECCCCEEEECCCCeEEEEECCcee
Confidence 567888889998654 46665 489999999999998731 1 2699999999999999999999986533
No 104
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.92 E-value=1.3e-08 Score=78.23 Aligned_cols=67 Identities=19% Similarity=0.271 Sum_probs=54.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCC
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIG 127 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g 127 (181)
.+.++. .-.||+...+|.|+ .+|++||++|++.+.+.++ ++.....|++||++++|+|++|+....+
T Consensus 35 ~~~V~~-v~Gpn~r~d~H~h~-~dE~FyvlkG~m~i~v~d~----g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 35 DFIVTV-VGGPNHRTDYHDDP-LEEFFYQLRGNAYLNLWVD----GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp SEEEEE-ECSCBCCCCEEECS-SCEEEEEEESCEEEEEEET----TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cEEEEE-EcCCCcCccCcCCC-CceEEEEEeeEEEEEEEcC----CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 444443 34788889999888 9999999999999999753 2234689999999999999999987754
No 105
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=98.89 E-value=1.7e-08 Score=70.38 Aligned_cols=72 Identities=17% Similarity=0.143 Sum_probs=60.9
Q ss_pred eEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCC-CCceeee---ecchhcCCCCCCHHHHHHHcCCCHHHHHHHHh
Q 048538 104 AKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSSQ-NPGVITI---ANSVFGANPPINPDFLAKAFQLDVDVVKDLEA 179 (181)
Q Consensus 104 ~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~-~~g~~~~---~~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~ 179 (181)
...|++||+++||+|.+-...+.+ .+.++++-+.+ ++....+ ..|++++ ++.++++.+|+++.+++++|+.
T Consensus 7 ~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~~---l~~evla~aF~~s~ee~~~l~~ 81 (93)
T 1dgw_Y 7 AATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVSDLTFPGSGEEVEELLE 81 (93)
T ss_dssp EEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTTT---SCHHHHHHHSSSCTHHHHHHTT
T ss_pred hceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHHh---CCHHHHHHHcCCCHHHHHHHHh
Confidence 477999999999999999999974 49999886655 5555444 3699998 9999999999999999999985
Q ss_pred c
Q 048538 180 K 180 (181)
Q Consensus 180 ~ 180 (181)
.
T Consensus 82 ~ 82 (93)
T 1dgw_Y 82 N 82 (93)
T ss_dssp S
T ss_pred c
Confidence 3
No 106
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.89 E-value=1.2e-08 Score=86.70 Aligned_cols=76 Identities=20% Similarity=0.194 Sum_probs=61.9
Q ss_pred ceEEEEEEEcCC---CcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcE
Q 048538 55 GISAVRIDYAPY---GQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNA 131 (181)
Q Consensus 55 ~~~~~~v~l~pg---~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~ 131 (181)
.+.+..+++.++ ...+.|.|+ .++++||++|++++++++. + .+.|++||+++||+|++|.++|.++. +
T Consensus 248 ~f~~~~i~~~~~~~g~~~~~h~~~-~~~~~~vleG~~~i~i~g~-----~--~~~l~~Gd~~~iPag~~h~~~~~~~~-~ 318 (350)
T 1juh_A 248 NYTLSTISMSTTPSTVTVPTWSFP-GACAFQVQEGRVVVQIGDY-----A--ATELGSGDVAFIPGGVEFKYYSEAYF-S 318 (350)
T ss_dssp CEEEEEEEECCCCTTSCCCCBCCS-SCEEEEEEESCEEEEETTS-----C--CEEECTTCEEEECTTCCEEEEESSSS-E
T ss_pred EEEEEEEeeccccCCCCCCcccCC-CcEEEEEEeeEEEEEECCe-----E--EEEeCCCCEEEECCCCCEEEEecCCe-E
Confidence 356677777774 467888898 8999999999999998631 2 69999999999999999999998654 7
Q ss_pred EEEEEEcC
Q 048538 132 VAIAALSS 139 (181)
Q Consensus 132 ~~l~v~~~ 139 (181)
+++++...
T Consensus 319 ~~l~~~~g 326 (350)
T 1juh_A 319 KVLFVSSG 326 (350)
T ss_dssp EEEEEEES
T ss_pred EEEEEecC
Confidence 77766654
No 107
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.82 E-value=7.1e-08 Score=77.30 Aligned_cols=100 Identities=15% Similarity=0.165 Sum_probs=71.3
Q ss_pred CCeeeecCCCCC-CccCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCC
Q 048538 20 QDICVAIDEPKN-AANRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNEL 98 (181)
Q Consensus 20 ~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~ 98 (181)
+-++...++++| +....|-+...+...... .+..+.+++++||+..+.|.|+ +.|.+|||+|++. +.
T Consensus 10 ~~v~i~~~~~~W~~~~~~Gv~~~~L~~~~~e----~g~~~~lvr~~pG~~~p~H~H~-g~Ee~~VL~G~f~----d~--- 77 (223)
T 3o14_A 10 KPVVIDTDQLEWRPSPMKGVERRMLDRIGGE----VARATSIVRYAPGSRFSAHTHD-GGEEFIVLDGVFQ----DE--- 77 (223)
T ss_dssp SCEEEEGGGSCCEECSSTTEEEEEEEEESSS----SCEEEEEEEECTTEECCCEECT-TCEEEEEEEEEEE----ET---
T ss_pred ceEEeeCccCCceeCCCCCEEEEEeecCCCc----cccEEEEEEECCCCCcccccCC-CCEEEEEEEeEEE----EC---
Confidence 334444456666 212345555555443211 1345678999999999999999 7888999999865 22
Q ss_pred CCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEc
Q 048538 99 NNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALS 138 (181)
Q Consensus 99 ~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~ 138 (181)
...+.+||+++.|+|..|.... ++.|.+++...
T Consensus 78 -----~~~~~~Gd~~~~P~g~~H~p~a--~~gc~~~vk~~ 110 (223)
T 3o14_A 78 -----HGDYPAGTYVRNPPTTSHVPGS--AEGCTIFVKLW 110 (223)
T ss_dssp -----TEEEETTEEEEECTTCEECCEE--SSCEEEEEEES
T ss_pred -----CeEECCCeEEEeCCCCccccEe--CCCCEEEEEec
Confidence 3689999999999999999876 57788887654
No 108
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.82 E-value=2.8e-09 Score=82.82 Aligned_cols=79 Identities=18% Similarity=0.148 Sum_probs=58.9
Q ss_pred EEEEEEEcCCCc---------CCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCC
Q 048538 57 SAVRIDYAPYGQ---------NPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIG 127 (181)
Q Consensus 57 ~~~~v~l~pg~~---------~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g 127 (181)
....+.+.|+.- .++|+|+ ..|+.||++|++.+.+..+ ++.....+++||+++||+|++|++.+.+
T Consensus 72 ~~D~i~~~~~~p~~~~~~~~~~~~H~H~-~~Ei~~Vl~G~g~~~i~~~----d~~~~~~l~~GDli~IP~g~~H~~~~~~ 146 (179)
T 1zrr_A 72 SWDVISLRADNPQKEALREKFLNEHTHG-EDEVRFFVEGAGLFCLHIG----DEVFQVLCEKNDLISVPAHTPHWFDMGS 146 (179)
T ss_dssp EEEEECCCTTCTHHHHHHHHHHSCBEES-SCEEEEEEESCCCCCEECS----SCEEEEECCCSCEEEECTTCCBCCCCSS
T ss_pred cccEEEEcCCCCChhHhhcccccceECC-hheEEEEEcceEEEEEEeC----CEEEEEEECCCCEEEECCCCeEeeecCC
Confidence 334455666532 5799999 7999999999999987522 2222366999999999999999998876
Q ss_pred CCcEEEEEEEcCC
Q 048538 128 KTNAVAIAALSSQ 140 (181)
Q Consensus 128 ~~~~~~l~v~~~~ 140 (181)
+..+..+-++..+
T Consensus 147 ~~~~~~ir~F~~~ 159 (179)
T 1zrr_A 147 EPNFTAIRIFDNP 159 (179)
T ss_dssp CSSCEEEEEECCG
T ss_pred CceEEEEEeccCC
Confidence 6667777666643
No 109
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.82 E-value=1.3e-08 Score=77.21 Aligned_cols=110 Identities=8% Similarity=-0.040 Sum_probs=75.7
Q ss_pred CCCCCeeeecCCCCC-Ccc----CCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEE
Q 048538 17 SPLQDICVAIDEPKN-AAN----RLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVG 91 (181)
Q Consensus 17 ~~~~~~~~~~~~~~~-~~~----~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~ 91 (181)
++.+..+...+++.| +.- ..|-++..+....- .+-...+++++||+..++|+|+ +.|.+|||+|+..+.
T Consensus 7 ~~~~~~~v~~d~~~W~p~P~~l~~~Gv~~k~L~~~~e-----~g~~t~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~ 80 (153)
T 3bal_A 7 KHTAEEYVKISDNNYVPFPEAFSDGGITWQLLHSSPE-----TSSWTAIFNCPAGSSFASHIHA-GPGEYFLTKGKMEVR 80 (153)
T ss_dssp CCCCCEEEECCGGGCEECCGGGEESCCEEEEEEEETT-----TTEEEEEEEECTTEEECCEEES-SCEEEEEEESEEEET
T ss_pred cCCcceEEccccCceecCCCccCCCCeEEEEEEECCc-----cceEEEEEEeCCCCCccCccCC-CCEEEEEEEEEEEec
Confidence 344445555577777 332 45777777744432 2567888999999999999999 778899999998774
Q ss_pred EEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcC
Q 048538 92 FVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSS 139 (181)
Q Consensus 92 v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~ 139 (181)
.+ +......+++|+.++.|+|..|..... +++..++.+...
T Consensus 81 ~G------d~~~~~~~~aGsYv~ePpGs~H~p~~~-~~~~~~~~~~~G 121 (153)
T 3bal_A 81 GG------EQEGGSTAYAPSYGFESSGALHGKTFF-PVESQFYMTFLG 121 (153)
T ss_dssp TC------GGGTSEEEESSEEEEECTTCEESCCEE-SSCEEEEEEEES
T ss_pred Cc------cccCccccCCCeEEEcCCCCcccceeC-CCCeEEEEEEEC
Confidence 32 111137889999999999999985332 234455555553
No 110
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.81 E-value=9.3e-08 Score=73.72 Aligned_cols=86 Identities=21% Similarity=0.282 Sum_probs=70.4
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCC--eeEeEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNN--TLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAV 132 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~--~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~ 132 (181)
++.+..+...||...++|-|.++..+++|++|+++..+....+ +. ......+++||++++|++..|++.|.++++++
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~-~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aV 146 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTG-EHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMV 146 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECS-SSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCC-CceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEE
Confidence 5678889999999999999996788899999999987543210 01 11357899999999999999999999999999
Q ss_pred EEEEEcCCC
Q 048538 133 AIAALSSQN 141 (181)
Q Consensus 133 ~l~v~~~~~ 141 (181)
-|-+++.+.
T Consensus 147 SlHvY~pp~ 155 (171)
T 3eqe_A 147 SLHVYSPPL 155 (171)
T ss_dssp EEEEEESCC
T ss_pred EEEEeCCCc
Confidence 999998654
No 111
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.80 E-value=3.2e-08 Score=83.20 Aligned_cols=78 Identities=22% Similarity=0.191 Sum_probs=65.7
Q ss_pred EEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecC-C---cEEEEcCCCeEEEEeCCCCcEE
Q 048538 57 SAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKK-G---DVFVFPIGLIHFQFNIGKTNAV 132 (181)
Q Consensus 57 ~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~-G---D~i~ip~g~~H~~~N~g~~~~~ 132 (181)
.....+++||....+|||....|.++|++|++.+.+.+. ..++.+.+.. | +.+++|+|..|.+.|.|+++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~ 348 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHV----NDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMV 348 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEET----TCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcC----CCCcEEEEEecCCcceEEEeCCCceEEeEEcCCCcEE
Confidence 345567899999999999988899999999999987643 2234677777 8 9999999999999999999999
Q ss_pred EEEEEc
Q 048538 133 AIAALS 138 (181)
Q Consensus 133 ~l~v~~ 138 (181)
++...+
T Consensus 349 ~~~~~~ 354 (369)
T 3st7_A 349 TIMWVN 354 (369)
T ss_dssp EEEEES
T ss_pred EEEecC
Confidence 887766
No 112
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.78 E-value=6.9e-08 Score=82.62 Aligned_cols=73 Identities=16% Similarity=0.084 Sum_probs=64.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+....++||....+|.|. +.+++||++|++.+.+++ .++..++||++++|++..|...|. +++.++
T Consensus 278 ti~~~~~~L~pG~~t~~hRht-~s~Vy~V~eG~G~~~I~~--------~~~~w~~gD~fvvP~w~~h~~~n~--~~a~Lf 346 (368)
T 3nw4_A 278 TLRCEFHRLRAGTETATRNEV-GSTVFQVFEGAGAVVMNG--------ETTKLEKGDMFVVPSWVPWSLQAE--TQFDLF 346 (368)
T ss_dssp SCEEEEEEECTTCBCCCEEES-SCEEEEEEESCEEEEETT--------EEEEECTTCEEEECTTCCEEEEES--SSEEEE
T ss_pred hHHhheEEECCCCccCCeecc-ccEEEEEEeCcEEEEECC--------EEEEecCCCEEEECCCCcEEEEeC--CCEEEE
Confidence 567778889999999999999 889999999999999852 269999999999999999999996 678888
Q ss_pred EEEc
Q 048538 135 AALS 138 (181)
Q Consensus 135 ~v~~ 138 (181)
.+-+
T Consensus 347 ~~~D 350 (368)
T 3nw4_A 347 RFSD 350 (368)
T ss_dssp EEES
T ss_pred EEeC
Confidence 6644
No 113
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.75 E-value=4.7e-08 Score=75.59 Aligned_cols=82 Identities=18% Similarity=0.248 Sum_probs=60.0
Q ss_pred eEEEEEEEcCCCcCCCccCCC------CcEEEEEEeCeEEEEEEeccCC--------C-----CeeEeEEecCCcEEEEc
Q 048538 56 ISAVRIDYAPYGQNPPHTHPR------ATDILAVLEGTLYVGFVTSNEL--------N-----NTLIAKVLKKGDVFVFP 116 (181)
Q Consensus 56 ~~~~~v~l~pg~~~~~H~H~~------~~E~~yVl~G~~~~~v~~~~~~--------~-----~~~~~~~l~~GD~i~ip 116 (181)
....++.+.||+..|.|.|+. -.|-++|+.|++++.+.+.... | .......|+|||++.+|
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIp 132 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIP 132 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEEC
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEEC
Confidence 455678899999999999997 7799999999999887421100 0 00134699999999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEEc
Q 048538 117 IGLIHFQFNIGKTNAVAIAALS 138 (181)
Q Consensus 117 ~g~~H~~~N~g~~~~~~l~v~~ 138 (181)
+|++|+++| +.+.+.+..+-+
T Consensus 133 pg~~H~f~a-geegvli~EvSt 153 (175)
T 2y0o_A 133 PNTKHWFQA-GEEGAVVTEMSS 153 (175)
T ss_dssp TTCCEEEEE-EEEEEEEEEEEE
T ss_pred CCCcEEEEe-CCCCEEEEEEeC
Confidence 999999999 334444443433
No 114
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.73 E-value=1.2e-07 Score=70.32 Aligned_cols=74 Identities=18% Similarity=0.073 Sum_probs=57.5
Q ss_pred eEEEEEEEcCCCcC-----CCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCC-C
Q 048538 56 ISAVRIDYAPYGQN-----PPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGK-T 129 (181)
Q Consensus 56 ~~~~~v~l~pg~~~-----~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~-~ 129 (181)
+..+.....|+... .+|.|+ ..|++||++|++++.+++ + .+.+++||++++|+|++|.+.+.++ +
T Consensus 13 ~~~G~~~~~~~~~~~~~~~~p~~h~-~~~i~~v~~G~~~~~i~~------~--~~~l~~Gd~~~i~p~~~H~~~~~~~~~ 83 (164)
T 2arc_A 13 LVAGLTPIEANGYLDFFIDRPLGMK-GYILNLTIRGQGVVKNQG------R--EFVCRPGDILLFPPGEIHHYGRHPEAR 83 (164)
T ss_dssp CEEEEEEEETTSTTCSCEEETTCCS-SEEEEEEEEECEEEEETT------E--EEEECTTCEEEECTTCCEEEEECTTSS
T ss_pred hhhcceeeccCCchhhhhccccCCC-ceEEEEEEEeEEEEEECC------E--EEEecCCeEEEEcCCCCEEEEeCCCCC
Confidence 44555556665432 478899 899999999999998852 2 6999999999999999999988763 6
Q ss_pred cEEEEEEEc
Q 048538 130 NAVAIAALS 138 (181)
Q Consensus 130 ~~~~l~v~~ 138 (181)
++..+++.-
T Consensus 84 ~~~~~~i~f 92 (164)
T 2arc_A 84 EWYHQWVYF 92 (164)
T ss_dssp EEEEEEEEE
T ss_pred cEEEEEEEE
Confidence 677666544
No 115
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.66 E-value=1.4e-07 Score=72.49 Aligned_cols=63 Identities=16% Similarity=0.364 Sum_probs=49.8
Q ss_pred EcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeC
Q 048538 63 YAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNI 126 (181)
Q Consensus 63 l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~ 126 (181)
=.|+....+|.|+ .+|++|+++|++.+.+.+++..+++-....|++||++++|+|++|+....
T Consensus 41 gGPn~r~D~H~~~-~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 41 GGPNERTDYHINP-TPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp CSSBCCSCEEECS-SCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred cCCCcCCcCcCCC-CceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 3567889999777 99999999999999998531000122468899999999999999998665
No 116
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.58 E-value=8.5e-07 Score=70.28 Aligned_cols=85 Identities=20% Similarity=0.245 Sum_probs=68.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCC---eeEeEEecCCcEEEEcC--CCeEEEEeC-CC
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNN---TLIAKVLKKGDVFVFPI--GLIHFQFNI-GK 128 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~---~~~~~~l~~GD~i~ip~--g~~H~~~N~-g~ 128 (181)
.+.+..+...||...++|-|. ...+++|++|+++.++..-.++|. ......+.+||++++++ |..|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~-~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHT-VWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCC-cceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 467788899999999999999 699999999999876643110010 01258899999999999 999999998 68
Q ss_pred CcEEEEEEEcCC
Q 048538 129 TNAVAIAALSSQ 140 (181)
Q Consensus 129 ~~~~~l~v~~~~ 140 (181)
++++.|-+|..+
T Consensus 157 ~~avsLHvY~~~ 168 (208)
T 2gm6_A 157 RVSISIHVYGAN 168 (208)
T ss_dssp SCEEEEEEESSC
T ss_pred CcEEEEEEEcCC
Confidence 899999888753
No 117
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.50 E-value=3.9e-07 Score=67.70 Aligned_cols=81 Identities=10% Similarity=0.146 Sum_probs=59.0
Q ss_pred eEEEEEEEcCC----CcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcE
Q 048538 56 ISAVRIDYAPY----GQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNA 131 (181)
Q Consensus 56 ~~~~~v~l~pg----~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~ 131 (181)
-.+...+..|. ....+|.|+..+|+++|++|++++.+.+....+.+.....+++|++++||+|+.|..... +++
T Consensus 25 W~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~--~e~ 102 (140)
T 3d0j_A 25 WLVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQ--KDT 102 (140)
T ss_dssp EEEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEEC--TTC
T ss_pred EEEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCC--Cce
Confidence 34566666665 356789999899999999999999987421000012358899999999999999999884 556
Q ss_pred EEEEEEc
Q 048538 132 VAIAALS 138 (181)
Q Consensus 132 ~~l~v~~ 138 (181)
+++.+=.
T Consensus 103 ~vLLiEp 109 (140)
T 3d0j_A 103 KMMYVQD 109 (140)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 6665533
No 118
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.50 E-value=5.3e-07 Score=74.07 Aligned_cols=74 Identities=18% Similarity=0.351 Sum_probs=57.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.++.+ =-|+....+| |+..+|++|+++|.+.+.+.++ ++-....|++||++++|+|++|...... +++.+
T Consensus 31 ~~~V~~v-gGpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~----g~~~~V~i~eGemfllP~gv~HsP~r~~--et~gL 102 (286)
T 2qnk_A 31 QLKVMFI-GGPNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQ----GKHRDVVIRQGEIFLLPARVPHSPQRFA--NTVGL 102 (286)
T ss_dssp SEEEEEE-CSCBCCCCEE-ECSSCEEEEEEESCEEEEEEET----TEEEEEEECTTEEEEECTTCCEEEEECT--TCEEE
T ss_pred cEEEEEE-eCCCcCccCc-CCCCCeEEEEEeCeEEEEEEeC----CceeeEEECCCeEEEeCCCCCcCCcccC--CeEEE
Confidence 3444433 3567779999 8889999999999999999863 2334688999999999999999998743 44555
Q ss_pred EE
Q 048538 135 AA 136 (181)
Q Consensus 135 ~v 136 (181)
.+
T Consensus 103 vi 104 (286)
T 2qnk_A 103 VV 104 (286)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 119
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.36 E-value=9.1e-06 Score=63.96 Aligned_cols=88 Identities=14% Similarity=0.101 Sum_probs=69.4
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCC----CeeEeEEecCCcEEEE-cCCCeEEEEeCC-C
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELN----NTLIAKVLKKGDVFVF-PIGLIHFQFNIG-K 128 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~----~~~~~~~l~~GD~i~i-p~g~~H~~~N~g-~ 128 (181)
.+.+..+...||...++|-|.++..+++||+|+.+.....-.+.+ .......+++||+.++ |.+-.|.+.|.+ +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 467778899999999999999778999999999998754311000 1123578999999999 778899999998 7
Q ss_pred CcEEEEEEEcCCCC
Q 048538 129 TNAVAIAALSSQNP 142 (181)
Q Consensus 129 ~~~~~l~v~~~~~~ 142 (181)
++++-|=+|..+..
T Consensus 149 ~~avSlHvY~pp~~ 162 (200)
T 3eln_A 149 EPAVSLHLYSPPFD 162 (200)
T ss_dssp CCEEEEEEEESCCS
T ss_pred CCEEEEEeCCCCcc
Confidence 89988888886543
No 120
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=98.35 E-value=8e-06 Score=60.93 Aligned_cols=97 Identities=15% Similarity=0.116 Sum_probs=68.5
Q ss_pred cCCCeEEEEeec-CCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCC-c
Q 048538 34 NRLGFSVKIANV-EQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKG-D 111 (181)
Q Consensus 34 ~~~g~~~~~~~~-~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~G-D 111 (181)
..+|. ++.+.. .+.|. .-..+ +....++||....+|.|....|++++++|++.+.+.+. ....++.|.+. .
T Consensus 15 D~RG~-L~~~e~~~~ipf-~ikRv-y~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg----~~~~~~~L~~~~~ 87 (141)
T 2pa7_A 15 DSRGS-LVAIEENKNIPF-SIKRV-YYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDG----NIIQEITLDSPAV 87 (141)
T ss_dssp ETTEE-EEEEETTTTSSS-CCCEE-EEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECS----SCEEEEEECCTTE
T ss_pred cCCCc-EEEEeccCCCCC-CccEE-EEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECC----cEEEEEEECCCCc
Confidence 34555 666666 44443 11122 22234568999999999989999999999999998643 33445666554 4
Q ss_pred EEEEcCCCeEEEEeCCCCcEEEEEEEc
Q 048538 112 VFVFPIGLIHFQFNIGKTNAVAIAALS 138 (181)
Q Consensus 112 ~i~ip~g~~H~~~N~g~~~~~~l~v~~ 138 (181)
.++||+|+.|.+.+.++. ++++.+-+
T Consensus 88 gL~IppgvWh~~~~~s~~-avllvlas 113 (141)
T 2pa7_A 88 GLYVGPAVWHEMHDFSSD-CVMMVLAS 113 (141)
T ss_dssp EEEECTTCEEEEECCCTT-CEEEEEES
T ss_pred EEEeCCCEEEEEEEcCCC-eEEEEECC
Confidence 599999999999999764 77776655
No 121
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=98.25 E-value=1.5e-05 Score=57.57 Aligned_cols=64 Identities=13% Similarity=0.024 Sum_probs=49.4
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCC
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIG 127 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g 127 (181)
.+.+......||... ++++. .+|++|||+|++++...+ +....+++||.+++|+|..-.|.-..
T Consensus 41 ~~~~GvWe~tPG~~~-~~~~~-~~E~~~iLeG~~~lt~dd-------G~~~~l~aGD~~~~P~G~~gtWev~e 104 (116)
T 3es4_A 41 GTIVAVWMAEPGIYN-YAGRD-LEETFVVVEGEALYSQAD-------ADPVKIGPGSIVSIAKGVPSRLEILS 104 (116)
T ss_dssp CCEEEEEEECSEEEE-ECCCS-EEEEEEEEECCEEEEETT-------CCCEEECTTEEEEECTTCCEEEEECS
T ss_pred CEEEEEEecCCceeE-CeeCC-CcEEEEEEEeEEEEEeCC-------CeEEEECCCCEEEECCCCeEEEEEeE
Confidence 456777788998654 23344 459999999999998632 22689999999999999999887754
No 122
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=98.21 E-value=2.2e-05 Score=60.51 Aligned_cols=119 Identities=16% Similarity=0.065 Sum_probs=78.8
Q ss_pred CCCCCCeeeecCCCCCCccCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEec
Q 048538 16 PSPLQDICVAIDEPKNAANRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTS 95 (181)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~ 95 (181)
+.++.+.... +++.-...+|. +.+.......++.. -........++|....+|+|....++++|++|++...+.+.
T Consensus 17 ~t~i~gv~ii--~~~~~~D~RG~-f~e~~~~~~~~~~~-f~Q~n~s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~ 92 (174)
T 3ejk_A 17 LLPVEGAQLS--ELRQIPAEGGP-VLHMLRLDSPQFSQ-FGEIYFSEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDG 92 (174)
T ss_dssp ECSSTTCEEE--ECCEECCTTSC-EECCCCTTCTTCCC-CCEEEEEEECBTCEEEEEEESSCCEEEEEEESEEEEEEECC
T ss_pred cCCCCCEEEE--eCCcEecCCcC-EEEEEecCccCCCC-eeEEEEEECCCCCEECcEecCCCceEEEEEeeEEEEEEEeC
Confidence 3445555444 44442245666 66666544322211 12333344688999999999878899999999999988753
Q ss_pred cCCC---CeeEeEEec---CCcEEEEcCCCeEEEEeCCCCcEEEEEEEc
Q 048538 96 NELN---NTLIAKVLK---KGDVFVFPIGLIHFQFNIGKTNAVAIAALS 138 (181)
Q Consensus 96 ~~~~---~~~~~~~l~---~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~ 138 (181)
-..+ ++-....|. ....++||+|..|.+.|.+++++.++...+
T Consensus 93 R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly~~s 141 (174)
T 3ejk_A 93 REKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVANCTD 141 (174)
T ss_dssp CTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEEEES
T ss_pred CCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEEECC
Confidence 2000 112456677 567999999999999999987888877665
No 123
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=98.06 E-value=7.8e-05 Score=59.09 Aligned_cols=85 Identities=18% Similarity=0.204 Sum_probs=66.4
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCe---eEeEEecCCcEEEEcCC--CeEEEEeCC-C
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNT---LIAKVLKKGDVFVFPIG--LIHFQFNIG-K 128 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~---~~~~~l~~GD~i~ip~g--~~H~~~N~g-~ 128 (181)
.+.+..+...||...++|-|. ..-++.|++|+.+-..-.-.+.|.- .....+.+||+.++.++ ..|.+.|.+ +
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 456788889999999999999 9999999999987765321100110 11478999999999987 899999985 7
Q ss_pred CcEEEEEEEcCC
Q 048538 129 TNAVAIAALSSQ 140 (181)
Q Consensus 129 ~~~~~l~v~~~~ 140 (181)
++++-|=+|..+
T Consensus 151 ~~avSLHvYg~p 162 (211)
T 3uss_A 151 RTSISIHVYGAN 162 (211)
T ss_dssp SCEEEEEEESSC
T ss_pred CCEEEEEEcCCC
Confidence 888888888754
No 124
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.99 E-value=3.1e-05 Score=62.53 Aligned_cols=72 Identities=18% Similarity=0.155 Sum_probs=54.2
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+++..+.+ .|..... .++ .+|++|||+|++++.. + + ..+.+++||+++||+|+.|.|...+.- ..++
T Consensus 46 ~~~~G~~~~-~g~~~v~-~~p-~dE~~~VleG~~~lt~-~-----g--~~~~~~~Gd~~~ip~G~~~~w~~~~~~-~~~y 113 (238)
T 3myx_A 46 GIAAGIVEF-GTALSVE-AYP-YTEMLVMHRGSVTLTS-G-----T--DSVTLSTGESAVIGRGTQVRIDAQPES-LWAF 113 (238)
T ss_dssp SEEEEEEEE-CSEEEES-SCS-SEEEEEEEESEEEEEE-T-----T--EEEEEETTCEEEECTTCCEEEEECTTE-EEEE
T ss_pred CeEEEEEEe-ccccccc-cCC-CcEEEEEEEeEEEEEC-C-----C--eEEEEcCCCEEEECCCCEEEEEecCCe-EEEE
Confidence 567888888 6665443 244 4799999999999986 2 2 279999999999999999999997543 3344
Q ss_pred EEEc
Q 048538 135 AALS 138 (181)
Q Consensus 135 ~v~~ 138 (181)
+.+.
T Consensus 114 ~~~~ 117 (238)
T 3myx_A 114 CAST 117 (238)
T ss_dssp EEEC
T ss_pred Eecc
Confidence 4555
No 125
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.93 E-value=3.8e-05 Score=61.87 Aligned_cols=75 Identities=7% Similarity=-0.026 Sum_probs=55.6
Q ss_pred ceEEEEEEEcCCCc--CCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeC--CCCc
Q 048538 55 GISAVRIDYAPYGQ--NPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNI--GKTN 130 (181)
Q Consensus 55 ~~~~~~v~l~pg~~--~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~--g~~~ 130 (181)
++.+....+..... .++|||+ ..|++||++|++. .+++ +....+.+++||++++|+|..|.+... ++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~G~~~-~i~~-----~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~ 78 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYIN-DYKMFWIDSGIAK-LIDK-----NCLVSYEINSSSIILLKKNSIQRFSLTSLSDEN 78 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEECS-SCEEEEESSSCEE-EEET-----TTTEEEEECTTEEEEECTTCEEEEEEEECCSSC
T ss_pred hhhhhhhhhhcccchhccHhhhc-ceEEEEEecCceE-EECC-----ccceeEEEcCCCEEEEcCCCceeeccccCCCcc
Confidence 45556666766654 4789999 8999999999999 8752 211158999999999999999998765 3445
Q ss_pred EEEEEE
Q 048538 131 AVAIAA 136 (181)
Q Consensus 131 ~~~l~v 136 (181)
+..+.+
T Consensus 79 ~~~~~i 84 (276)
T 3gbg_A 79 INVSVI 84 (276)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 444443
No 126
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.91 E-value=6.8e-05 Score=60.48 Aligned_cols=64 Identities=16% Similarity=0.237 Sum_probs=51.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCC
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIG 127 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g 127 (181)
.++.......||....++ |. ..|++|||+|++++... + +..+.+++||.++||+|..-.|.-..
T Consensus 166 ~~~~GiW~~tpG~~~~~~-~~-~~E~~~ILeG~v~lt~~-~------G~~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRP-HK-IHELMNLIEGRVVLSLE-N------GSSLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp SCEEEEEEECCEEBCCEE-CS-SCEEEEEEECCEEEEET-T------SCEEEECTTCEEEECTTCEEEEEESS
T ss_pred CEEEeEEEeCCCEEECCc-CC-CCEEEEEEEeEEEEEeC-C------CCEEEECCCCEEEECCCCEEEEEECc
Confidence 567888889998755543 34 57999999999999753 2 22699999999999999999888763
No 127
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.88 E-value=0.00048 Score=52.73 Aligned_cols=131 Identities=13% Similarity=0.076 Sum_probs=86.5
Q ss_pred cCCCeEEEEeecCCCC-CCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeE-EEEEEeccCCCCeeEeEE----e
Q 048538 34 NRLGFSVKIANVEQIP-GLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTL-YVGFVTSNELNNTLIAKV----L 107 (181)
Q Consensus 34 ~~~g~~~~~~~~~~~p-~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~-~~~v~~~~~~~~~~~~~~----l 107 (181)
++-||++++.+....+ .-.....+..++-+.+|....+|... ++|+.|...|.. ++.+..++ ++..+.. +
T Consensus 26 HPEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv~-sdEiW~~~~G~pL~l~l~~~d---g~~~~~~LG~dv 101 (170)
T 1yud_A 26 HVEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRLT-ADEMWYFHAGQSLTIYMISPE---GELTTAQLGLDL 101 (170)
T ss_dssp CTTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEECS-SCEEEEEEEESCEEEEEECTT---SCEEEEEESSCT
T ss_pred CCCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEcC-CCEEEEEEcCCCEEEEEEcCC---CCEEEEEeCCCc
Confidence 6678888888876411 11222456777889999998999988 999999999984 77775443 2222333 6
Q ss_pred cCCcE--EEEcCCCeEEEEeCCCCcEEEEEEEcCC-CCceeeeecchhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 048538 108 KKGDV--FVFPIGLIHFQFNIGKTNAVAIAALSSQ-NPGVITIANSVFGANPPINPDFLAKAFQLDVDVVKDLE 178 (181)
Q Consensus 108 ~~GD~--i~ip~g~~H~~~N~g~~~~~~l~v~~~~-~~g~~~~~~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~ 178 (181)
.+|+. ++||+|+.+..++.+...+.+-|+.... +...+.+ .+++.|.+.|-.-++.++++.
T Consensus 102 ~~Ge~pQ~vVP~G~wqaa~~~~g~~~LV~C~VaPGF~f~dfel----------~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 102 AAGERPQFLVPKGCIFGSAMNQDGFSLVGCMVSPGFTFDDFEL----------FSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp TTTEESCEEECTTCEEEEEESSSSEEEEEEEESSCCCGGGCCB----------CBHHHHHHSCCTTHHHHTTSC
T ss_pred ccCceeEEEECCCCEEEEEECCCCcEEEEEEECCCccCCceEE----------cCHHHHHhHCchhHHHHHHhh
Confidence 77898 9999999999998733554444444321 2222222 346666667766666666653
No 128
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.69 E-value=0.00043 Score=55.19 Aligned_cols=77 Identities=16% Similarity=0.199 Sum_probs=59.9
Q ss_pred CCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEE
Q 048538 36 LGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVF 115 (181)
Q Consensus 36 ~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~i 115 (181)
.|-++.+++.... -.+.+++++||...++|.| ++.|+ +||+|++. ++ ...+.+|+.+..
T Consensus 133 ~Gv~~~~L~~~~~-------E~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d~--------~~~~~~GsWlR~ 191 (223)
T 3o14_A 133 EGISTSLLHEDER-------ETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VN--------DEVLGRNAWLRL 191 (223)
T ss_dssp TTEEEEEEEECSS-------CEEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----ET--------TEEECTTEEEEE
T ss_pred CCeEEEEEecCCC-------cEEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----EC--------CceECCCeEEEe
Confidence 4555667766642 1456788999999999999 49996 99999865 22 268999999999
Q ss_pred cCCCeEEEEeCCCCcEEEE
Q 048538 116 PIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 116 p~g~~H~~~N~g~~~~~~l 134 (181)
|.|..|...+ +++.|.++
T Consensus 192 P~gs~h~~~a-g~~g~~i~ 209 (223)
T 3o14_A 192 PEGEALSATA-GARGAKIW 209 (223)
T ss_dssp CTTCCEEEEE-EEEEEEEE
T ss_pred CCCCccCcEE-CCCCeEEE
Confidence 9999999888 56777654
No 129
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.58 E-value=0.00031 Score=57.21 Aligned_cols=74 Identities=19% Similarity=0.238 Sum_probs=58.5
Q ss_pred EEEEEEcCCCcCCCccCCCCcE-EEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcC--CCeEEEEeCCC-CcEEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATD-ILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPI--GLIHFQFNIGK-TNAVA 133 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E-~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~--g~~H~~~N~g~-~~~~~ 133 (181)
+...++.||...++|-|. +.| +.||++|+++.. ++. |+ ...+++||+-.+.+ |+.|.-+|..+ +++++
T Consensus 66 ln~~~~~pg~gf~~HPHr-g~EtvTyvl~G~~~H~--DS~--Gn---~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~ 137 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYP-KVDILNVILDGEAEYR--DSE--GN---HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTR 137 (256)
T ss_dssp EEEEEECTTCEEEEECCS-SEEEEEEEEESEEEEE--ETT--SC---EEEEETTEEEEECCCTTCCEEEEECCSSSCEEE
T ss_pred ccccccCCCCccCCcCCC-CcEEEEEEEeeEEEEE--eCC--CC---EEEECCCeEEEEECCCCeEEEEEECCCCceEEE
Confidence 455779999999999999 566 679999999875 332 23 68999999999966 57999999754 78888
Q ss_pred EEEEcC
Q 048538 134 IAALSS 139 (181)
Q Consensus 134 l~v~~~ 139 (181)
+-++-.
T Consensus 138 lQlWi~ 143 (256)
T 2vec_A 138 MQLWLD 143 (256)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 877653
No 130
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=97.36 E-value=0.0011 Score=53.44 Aligned_cols=74 Identities=18% Similarity=0.123 Sum_probs=57.7
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcC--CCeEEEEeCC-CCcEEEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPI--GLIHFQFNIG-KTNAVAI 134 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~--g~~H~~~N~g-~~~~~~l 134 (181)
.....+.||...++|-|.+-+.+.||++|+++.. ++. |+ ...+++||+-.+-+ |+.|.-.|.. +++++++
T Consensus 43 ~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~--Gn---~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~l 115 (242)
T 1tq5_A 43 INDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSM--GN---KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLY 115 (242)
T ss_dssp EEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESS--SC---EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEE
T ss_pred eccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCC--CC---cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEE
Confidence 3456789998899999995445789999998875 332 23 58999999999966 5899999976 4788887
Q ss_pred EEEc
Q 048538 135 AALS 138 (181)
Q Consensus 135 ~v~~ 138 (181)
-++-
T Consensus 116 QlWv 119 (242)
T 1tq5_A 116 QIWI 119 (242)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7665
No 131
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=97.16 E-value=0.0056 Score=47.37 Aligned_cols=78 Identities=12% Similarity=0.088 Sum_probs=54.0
Q ss_pred EEEEcCCCcCCCccC--CCCcEEEEEEeCeEEEEEEeccCCC---CeeEeEEecC--CcEEEEcCCCeEEEEeCCCCcEE
Q 048538 60 RIDYAPYGQNPPHTH--PRATDILAVLEGTLYVGFVTSNELN---NTLIAKVLKK--GDVFVFPIGLIHFQFNIGKTNAV 132 (181)
Q Consensus 60 ~v~l~pg~~~~~H~H--~~~~E~~yVl~G~~~~~v~~~~~~~---~~~~~~~l~~--GD~i~ip~g~~H~~~N~g~~~~~ 132 (181)
...-.+|....+|+| ....++++|++|++...+.+....+ ++-....|.+ +..++||+|..|.+.+.++. +.
T Consensus 52 ~S~s~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~ 130 (185)
T 1ep0_A 52 ESMSVRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CI 130 (185)
T ss_dssp EEEEETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EE
T ss_pred EEeCcCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eE
Confidence 333458999999999 5578999999999743333321000 0223456655 58999999999999999866 66
Q ss_pred EEEEEc
Q 048538 133 AIAALS 138 (181)
Q Consensus 133 ~l~v~~ 138 (181)
++...+
T Consensus 131 ~~y~~s 136 (185)
T 1ep0_A 131 VNYKCT 136 (185)
T ss_dssp EEEEES
T ss_pred EEEecC
Confidence 665544
No 132
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=97.11 E-value=0.0067 Score=46.90 Aligned_cols=78 Identities=12% Similarity=0.036 Sum_probs=53.9
Q ss_pred EEEEcCCCcCCCccC--CCCcEEEEEEeCeEEEEEEeccCCC---CeeEeEEecC--CcEEEEcCCCeEEEEeCCCCcEE
Q 048538 60 RIDYAPYGQNPPHTH--PRATDILAVLEGTLYVGFVTSNELN---NTLIAKVLKK--GDVFVFPIGLIHFQFNIGKTNAV 132 (181)
Q Consensus 60 ~v~l~pg~~~~~H~H--~~~~E~~yVl~G~~~~~v~~~~~~~---~~~~~~~l~~--GD~i~ip~g~~H~~~N~g~~~~~ 132 (181)
...-.+|....+|+| .....+++|++|++...+.+....+ ++-....|.+ +..++||+|..|.+.+.++. +.
T Consensus 53 ~S~s~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~ 131 (184)
T 2ixk_A 53 HSRSARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AE 131 (184)
T ss_dssp EEEEETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EE
T ss_pred EEeCCCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EE
Confidence 333458999999999 5478999999999743333321000 1223455665 58999999999999999866 66
Q ss_pred EEEEEc
Q 048538 133 AIAALS 138 (181)
Q Consensus 133 ~l~v~~ 138 (181)
++...+
T Consensus 132 ~~y~~s 137 (184)
T 2ixk_A 132 FLYKTT 137 (184)
T ss_dssp EEEEES
T ss_pred EEEeCC
Confidence 665545
No 133
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=97.08 E-value=0.0053 Score=51.68 Aligned_cols=76 Identities=20% Similarity=0.116 Sum_probs=55.4
Q ss_pred EEEcC-CCcCCCccCCCCcEEEEEEeCeEEEEEE-eccC-----C-------------------------CCeeEeEEec
Q 048538 61 IDYAP-YGQNPPHTHPRATDILAVLEGTLYVGFV-TSNE-----L-------------------------NNTLIAKVLK 108 (181)
Q Consensus 61 v~l~p-g~~~~~H~H~~~~E~~yVl~G~~~~~v~-~~~~-----~-------------------------~~~~~~~~l~ 108 (181)
+.+-| |+..++|+.. ..-++..++|+=++.+. .+.. . .......+|+
T Consensus 145 ~~~gp~g~~~~~H~D~-~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDA-YTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECS-SEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECC-hhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 44445 7788999987 67888899999888776 3210 0 0112467899
Q ss_pred CCcEEEEcCCCeEEEEeCCCCcEEEEEEE
Q 048538 109 KGDVFVFPIGLIHFQFNIGKTNAVAIAAL 137 (181)
Q Consensus 109 ~GD~i~ip~g~~H~~~N~g~~~~~~l~v~ 137 (181)
|||++|+|+|.+|+..+.+++++.-+.+-
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEEEEC
T ss_pred CCcEEEeCCCccEEEEECCCCceEEEEEC
Confidence 99999999999999999865566555553
No 134
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=97.00 E-value=0.0076 Score=47.06 Aligned_cols=81 Identities=12% Similarity=0.008 Sum_probs=55.0
Q ss_pred EEEEEEEcCCCcCCCccCCC---CcEEEEEEeCeEEEEEEeccCCC---CeeEeEEecC--CcEEEEcCCCeEEEEeCCC
Q 048538 57 SAVRIDYAPYGQNPPHTHPR---ATDILAVLEGTLYVGFVTSNELN---NTLIAKVLKK--GDVFVFPIGLIHFQFNIGK 128 (181)
Q Consensus 57 ~~~~v~l~pg~~~~~H~H~~---~~E~~yVl~G~~~~~v~~~~~~~---~~~~~~~l~~--GD~i~ip~g~~H~~~N~g~ 128 (181)
......-.+|....+|+|.. ...+++|++|++...+.+....+ ++-..+.|.+ +..++||+|..|.+.+.++
T Consensus 66 Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd 145 (196)
T 1wlt_A 66 QTNMSFSRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALED 145 (196)
T ss_dssp EEEEEEECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSS
T ss_pred EEEEEECCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCC
Confidence 33344446888899999974 57999999999944344321000 1124466665 6899999999999999986
Q ss_pred CcEEEEEEEc
Q 048538 129 TNAVAIAALS 138 (181)
Q Consensus 129 ~~~~~l~v~~ 138 (181)
++.++...+
T Consensus 146 -~a~~ly~~s 154 (196)
T 1wlt_A 146 -SIVIYFITH 154 (196)
T ss_dssp -EEEEEEEES
T ss_pred -CeEEEEEeC
Confidence 455554444
No 135
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.97 E-value=0.0024 Score=49.71 Aligned_cols=67 Identities=16% Similarity=0.388 Sum_probs=48.4
Q ss_pred EEEc-CCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCC-------------------------------CCeeEeEEec
Q 048538 61 IDYA-PYGQNPPHTHPRATDILAVLEGTLYVGFVTSNEL-------------------------------NNTLIAKVLK 108 (181)
Q Consensus 61 v~l~-pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~-------------------------------~~~~~~~~l~ 108 (181)
+.+- +|+..++|+.. ..-+..+++|+=++.+..+... .......+|+
T Consensus 128 ~wiG~~gs~t~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~ 206 (235)
T 4gjz_A 128 AWFGPQGTISPLHQDP-QQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILS 206 (235)
T ss_dssp EEEECTTCEEEEECCS-SEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEEC
T ss_pred EEEeCCCCCceeeecc-ccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEEC
Confidence 4444 45556778666 6778889999988888654310 0012356899
Q ss_pred CCcEEEEcCCCeEEEEeCCC
Q 048538 109 KGDVFVFPIGLIHFQFNIGK 128 (181)
Q Consensus 109 ~GD~i~ip~g~~H~~~N~g~ 128 (181)
|||+++||+|..|+.+|.++
T Consensus 207 pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 207 PGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp TTCEEEECTTCEEEEEESSS
T ss_pred CCCEEEeCCCCcEEEEECCC
Confidence 99999999999999999853
No 136
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.92 E-value=0.0063 Score=47.59 Aligned_cols=78 Identities=9% Similarity=-0.021 Sum_probs=56.9
Q ss_pred EEEEEEEcCCCcCCCccCCCCcEEEEEEe-CeE-EEEEEeccCCC---CeeEeEEecCCcEEEEcCCCeEEEEeCCCCcE
Q 048538 57 SAVRIDYAPYGQNPPHTHPRATDILAVLE-GTL-YVGFVTSNELN---NTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNA 131 (181)
Q Consensus 57 ~~~~v~l~pg~~~~~H~H~~~~E~~yVl~-G~~-~~~v~~~~~~~---~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~ 131 (181)
......-.+|....+|.|. ...+++|++ |++ .+.++.. ++ ++-....|.++..++||+|..|.+.+.++. +
T Consensus 61 Q~n~S~s~~GvlRGlH~h~-q~Klv~~~~~G~v~dV~VDlR--~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a 136 (197)
T 1nxm_A 61 QNNVSFSRKNVLRGLHAEP-WDKYISVADGGKVLGTWVDLR--EGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-V 136 (197)
T ss_dssp EEEEEEEETTBEEEEEECS-SCEEEEECSSCCEEEEEEECB--SSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-E
T ss_pred EEEEEECCCCCcceeeecc-cceEEEEcCCCEEEEEEEECC--CCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-e
Confidence 3434344788899999997 889999999 995 4444322 00 123457788999999999999999998754 6
Q ss_pred EEEEEEc
Q 048538 132 VAIAALS 138 (181)
Q Consensus 132 ~~l~v~~ 138 (181)
.++...+
T Consensus 137 ~~~y~~s 143 (197)
T 1nxm_A 137 AYSYLVN 143 (197)
T ss_dssp EEEEEES
T ss_pred EEEEECC
Confidence 6665555
No 137
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.90 E-value=0.013 Score=45.24 Aligned_cols=78 Identities=10% Similarity=0.043 Sum_probs=53.4
Q ss_pred EEEEcCCCcCCCccCC---CCcEEEEEEeCeEEEEEEeccCCC---CeeEeEEecC--CcEEEEcCCCeEEEEeCCCCcE
Q 048538 60 RIDYAPYGQNPPHTHP---RATDILAVLEGTLYVGFVTSNELN---NTLIAKVLKK--GDVFVFPIGLIHFQFNIGKTNA 131 (181)
Q Consensus 60 ~v~l~pg~~~~~H~H~---~~~E~~yVl~G~~~~~v~~~~~~~---~~~~~~~l~~--GD~i~ip~g~~H~~~N~g~~~~ 131 (181)
...-.+|....+|+|. ....+++|++|++...+.+...++ ++-....|.+ +..++||+|..|.+.+.++. +
T Consensus 51 ~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a 129 (183)
T 1dzr_A 51 HSKSKKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-A 129 (183)
T ss_dssp EEEEETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-E
T ss_pred EEeCCCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-e
Confidence 3334589899999995 578999999999743333321100 1123456665 58999999999999999866 5
Q ss_pred EEEEEEc
Q 048538 132 VAIAALS 138 (181)
Q Consensus 132 ~~l~v~~ 138 (181)
.++...+
T Consensus 130 ~~~y~~s 136 (183)
T 1dzr_A 130 EFLYKAT 136 (183)
T ss_dssp EEEEEES
T ss_pred EEEEEcC
Confidence 5555444
No 138
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=96.90 E-value=0.01 Score=48.67 Aligned_cols=96 Identities=16% Similarity=0.028 Sum_probs=66.8
Q ss_pred cCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcE-EEEEEeCeEEEEEEeccCCCCeeEeEEecCCcE
Q 048538 34 NRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATD-ILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDV 112 (181)
Q Consensus 34 ~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E-~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~ 112 (181)
...|..++.+........-+.-+.+.. ...|+..+++|-|. +.| +.||++|+++.. ++. +....+++||+
T Consensus 18 ~G~g~~v~R~~~~~~~~~~gpf~~ld~-~~~~~~gf~~HPHr-g~EtVTyvl~G~~~H~--DS~-----Gn~~~i~~Gdv 88 (277)
T 2p17_A 18 NSPIHRSGSVLEPGNWQEYDPFLLLME-DIFERGTFDVHPHR-GIETVTYVISGELEHF--DSK-----AGHSTLGPGDV 88 (277)
T ss_dssp EETTEEEEEEECSSCHHHHTTEEEEEE-EEECTTCCCCEEEC-SEEEEEEEEESCEEEE--ETT-----TEEEEECTTCE
T ss_pred cCCCeEEeecCCcccccccCCEEEEec-CCCCCCCCCCCCCC-CcEEEEEEEEeEEEEe--eCC-----CCceEECCCeE
Confidence 455565555554322111111233455 67888889999999 666 679999998875 332 23689999999
Q ss_pred EEEcC--CCeEEEEeCCCCcEEEEEEEc
Q 048538 113 FVFPI--GLIHFQFNIGKTNAVAIAALS 138 (181)
Q Consensus 113 i~ip~--g~~H~~~N~g~~~~~~l~v~~ 138 (181)
-.+-+ |+.|.-.|..+++++++-++-
T Consensus 89 QwMtAG~GI~HsE~~~~~~~~~~lQlWv 116 (277)
T 2p17_A 89 QWMTAGRGVVHKEDPASGSTVHSLQLWV 116 (277)
T ss_dssp EEEECTTCEEEEEEECTTCCEEEEEEEE
T ss_pred EEEeCCCCEEEEeecCCCCCEEEEEEEe
Confidence 99998 568999998778888877664
No 139
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=96.86 E-value=0.034 Score=44.59 Aligned_cols=82 Identities=17% Similarity=0.134 Sum_probs=57.2
Q ss_pred EEEEEEEcCCCcCCCccCCCCcEEEEEEeC-eEEEEEEeccCC-------------CCe-----eEeEEecCCcEEEEcC
Q 048538 57 SAVRIDYAPYGQNPPHTHPRATDILAVLEG-TLYVGFVTSNEL-------------NNT-----LIAKVLKKGDVFVFPI 117 (181)
Q Consensus 57 ~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G-~~~~~v~~~~~~-------------~~~-----~~~~~l~~GD~i~ip~ 117 (181)
.--.+.+.||+..|.|.|..-.|-+++.-| ++.+++.....+ |.+ +....|.||+++.+++
T Consensus 107 aeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~P 186 (246)
T 3kmh_A 107 AEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLPP 186 (246)
T ss_dssp EEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEECT
T ss_pred eeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecCC
Confidence 344577899999999999988999988888 443333322210 100 1246799999999999
Q ss_pred CCeEEEEeCCCC-cEEEEEEEc
Q 048538 118 GLIHFQFNIGKT-NAVAIAALS 138 (181)
Q Consensus 118 g~~H~~~N~g~~-~~~~l~v~~ 138 (181)
|+.|+++..+.. ++.+--|-+
T Consensus 187 g~~H~F~ae~g~G~vligEVSt 208 (246)
T 3kmh_A 187 GLYHSFWAEAGFGDVLVGEVSS 208 (246)
T ss_dssp TEEEEEEECTTSCCEEEEEEEE
T ss_pred CCEEEEEecCCCccEEEEEccc
Confidence 999999987653 455554544
No 140
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.83 E-value=0.014 Score=45.85 Aligned_cols=80 Identities=10% Similarity=0.016 Sum_probs=54.4
Q ss_pred EEEEEEcCCCcCCCccCCC---CcEEEEEEeCeEEEEEEeccCCC---CeeEeEEecC--CcEEEEcCCCeEEEEeCCCC
Q 048538 58 AVRIDYAPYGQNPPHTHPR---ATDILAVLEGTLYVGFVTSNELN---NTLIAKVLKK--GDVFVFPIGLIHFQFNIGKT 129 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~---~~E~~yVl~G~~~~~v~~~~~~~---~~~~~~~l~~--GD~i~ip~g~~H~~~N~g~~ 129 (181)
.....-.+|....+|+|.. ...+++|++|++...+.+....+ ++-....|.+ +..++||+|..|.+.+.++.
T Consensus 49 ~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (205)
T 1oi6_A 49 TIHSMSKRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD 128 (205)
T ss_dssp EEEEEECTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT
T ss_pred EEEEeCCCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC
Confidence 3333446888899999963 57999999999754444321000 1124466666 48999999999999999866
Q ss_pred cEEEEEEEc
Q 048538 130 NAVAIAALS 138 (181)
Q Consensus 130 ~~~~l~v~~ 138 (181)
+.++...+
T Consensus 129 -a~~~y~~s 136 (205)
T 1oi6_A 129 -TVMSYMLS 136 (205)
T ss_dssp -EEEEEEES
T ss_pred -eEEEEecC
Confidence 55555444
No 141
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=96.82 E-value=0.057 Score=43.92 Aligned_cols=73 Identities=19% Similarity=0.232 Sum_probs=58.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeE-EEEeCCCCcEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIH-FQFNIGKTNAVA 133 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H-~~~N~g~~~~~~ 133 (181)
+.+..++.++|+-..|+=.|.-..| +||++|++.+. .+.+.+|+.+++|+|+.- .+.-.|++++.+
T Consensus 90 GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G------------~~~l~~h~Y~f~PaGV~~~~~kv~~~~g~~i 156 (303)
T 2qdr_A 90 GASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG------------EWQLNKHSYSFIPAGVRIGSWKVLGGEEAEI 156 (303)
T ss_dssp SCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET------------TEEECTTEEEEECTTCCBCCEEEETTSCEEE
T ss_pred CcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC------------CEEecCCceEEecCCCccCceeecCCCCcEE
Confidence 4466778899998888877764567 99999988762 289999999999999966 566778899999
Q ss_pred EEEEcCC
Q 048538 134 IAALSSQ 140 (181)
Q Consensus 134 l~v~~~~ 140 (181)
|.+....
T Consensus 157 L~fe~g~ 163 (303)
T 2qdr_A 157 LWMENGS 163 (303)
T ss_dssp EEEECSS
T ss_pred EEEecCC
Confidence 9884433
No 142
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.77 E-value=0.013 Score=46.41 Aligned_cols=78 Identities=12% Similarity=-0.053 Sum_probs=52.9
Q ss_pred EEEEcCCCcCCCccCCC---CcEEEEEEeCeEEEEEEeccCCC---CeeEeEEecC--CcEEEEcCCCeEEEEeCCCCcE
Q 048538 60 RIDYAPYGQNPPHTHPR---ATDILAVLEGTLYVGFVTSNELN---NTLIAKVLKK--GDVFVFPIGLIHFQFNIGKTNA 131 (181)
Q Consensus 60 ~v~l~pg~~~~~H~H~~---~~E~~yVl~G~~~~~v~~~~~~~---~~~~~~~l~~--GD~i~ip~g~~H~~~N~g~~~~ 131 (181)
...-.+|....+|+|.. ...+++|++|++...+.+....+ .+-....|.+ +..++||+|..|.+.+.++. +
T Consensus 59 ~S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a 137 (216)
T 2c0z_A 59 LSVSVRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-A 137 (216)
T ss_dssp EEEEETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-E
T ss_pred EEeCCCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-e
Confidence 33345888999999974 57999999999743333321000 1123456665 47999999999999999866 5
Q ss_pred EEEEEEc
Q 048538 132 VAIAALS 138 (181)
Q Consensus 132 ~~l~v~~ 138 (181)
.++...+
T Consensus 138 ~~ly~~s 144 (216)
T 2c0z_A 138 TLCYLSS 144 (216)
T ss_dssp EEEEEES
T ss_pred EEEEecC
Confidence 5555444
No 143
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.72 E-value=0.019 Score=45.76 Aligned_cols=80 Identities=11% Similarity=0.027 Sum_probs=53.9
Q ss_pred EEEEEEcCCCcCCCccCCC---CcEEEEEEeCeEEEEEEeccCCC---CeeEeEEecC--CcEEEEcCCCeEEEEeCCCC
Q 048538 58 AVRIDYAPYGQNPPHTHPR---ATDILAVLEGTLYVGFVTSNELN---NTLIAKVLKK--GDVFVFPIGLIHFQFNIGKT 129 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~---~~E~~yVl~G~~~~~v~~~~~~~---~~~~~~~l~~--GD~i~ip~g~~H~~~N~g~~ 129 (181)
.....-.+|....+|+|.. ...+++|++|++...+.+....+ ++-..+.|.+ +..++||+|..|.+.+.++.
T Consensus 68 ~n~S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 147 (225)
T 1upi_A 68 VNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN 147 (225)
T ss_dssp EEEEEECTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS
T ss_pred EEEEeCCCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC
Confidence 3334446888899999973 57999999999754343321000 1123456665 48999999999999999866
Q ss_pred cEEEEEEEc
Q 048538 130 NAVAIAALS 138 (181)
Q Consensus 130 ~~~~l~v~~ 138 (181)
+.++...+
T Consensus 148 -a~vly~~s 155 (225)
T 1upi_A 148 -STVMYLCS 155 (225)
T ss_dssp -EEEEEEES
T ss_pred -EEEEEecC
Confidence 55555444
No 144
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=96.71 E-value=0.004 Score=51.08 Aligned_cols=64 Identities=17% Similarity=0.068 Sum_probs=46.2
Q ss_pred EcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEc
Q 048538 63 YAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALS 138 (181)
Q Consensus 63 l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~ 138 (181)
+-+|.....- -. .+-++++|||+..+.+++ .++.|++||++.||+++.|.+... +.++.|.+..
T Consensus 214 ~G~Ges~~~~-~~-~d~wiWqLEGss~Vt~~~--------q~~~L~~~DsLLIpa~~~y~~~r~--~gsv~L~I~~ 277 (286)
T 2qnk_A 214 YGQGSSEGLR-QN-VDVWLWQLEGSSVVTMGG--------RRLSLAPDDSLLVLAGTSYAWERT--QGSVALSVTQ 277 (286)
T ss_dssp ECSEEEEECC-CS-SCEEEEEEESCEEEEETT--------EEEEECTTEEEEECTTCCEEEEEC--TTCEEEEEEE
T ss_pred EcCCcccccc-Cc-CcEEEEEEcCceEEEECC--------eEEeccCCCEEEecCCCeEEEEec--CCeEEEEEEE
Confidence 6666542211 11 368899999999988752 279999999999999999998774 4456665543
No 145
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.68 E-value=0.014 Score=42.44 Aligned_cols=71 Identities=18% Similarity=0.179 Sum_probs=52.0
Q ss_pred CCCcCCCc---c-CCCCcEEEEEEeCeEEEEEEeccCCCC--eeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEE-EEEE
Q 048538 65 PYGQNPPH---T-HPRATDILAVLEGTLYVGFVTSNELNN--TLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVA-IAAL 137 (181)
Q Consensus 65 pg~~~~~H---~-H~~~~E~~yVl~G~~~~~v~~~~~~~~--~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~-l~v~ 137 (181)
|++....| . |.+..+.+.|++|++.+..-++. |+ -.....+.+|+..++|++..|.+...++ ++++ +.++
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~--g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f~leFy 99 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADE--HSAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYFNIDFF 99 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESST--TCSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEEEEEEE
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCC--CCcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEEEEEEE
Confidence 55667778 4 88677899999999999754332 12 1245679999999999999999998665 5555 4454
Q ss_pred c
Q 048538 138 S 138 (181)
Q Consensus 138 ~ 138 (181)
.
T Consensus 100 c 100 (127)
T 3bb6_A 100 V 100 (127)
T ss_dssp E
T ss_pred e
Confidence 4
No 146
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.63 E-value=0.023 Score=44.60 Aligned_cols=75 Identities=13% Similarity=0.176 Sum_probs=52.7
Q ss_pred EcCCCcCCCccCC---CCcEEEEEEeCeEEEEEEeccCCC---CeeEeEEecC--CcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 63 YAPYGQNPPHTHP---RATDILAVLEGTLYVGFVTSNELN---NTLIAKVLKK--GDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 63 l~pg~~~~~H~H~---~~~E~~yVl~G~~~~~v~~~~~~~---~~~~~~~l~~--GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.++|....+|+|. ...++++|++|++.-.+.+-...+ ++-....|.+ +..++||+|..|.+.+.++. +.++
T Consensus 77 ~~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a~~~ 155 (205)
T 3ryk_A 77 AEAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-TIVM 155 (205)
T ss_dssp SSTTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-EEEE
T ss_pred CCCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-EEEE
Confidence 3789999999995 268999999999654444321000 1123456765 79999999999999999864 5555
Q ss_pred EEEc
Q 048538 135 AALS 138 (181)
Q Consensus 135 ~v~~ 138 (181)
...+
T Consensus 156 Y~~s 159 (205)
T 3ryk_A 156 YKVD 159 (205)
T ss_dssp EEES
T ss_pred EEcC
Confidence 4444
No 147
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=96.62 E-value=0.017 Score=47.59 Aligned_cols=74 Identities=15% Similarity=0.197 Sum_probs=58.8
Q ss_pred EEEEEEEcCCCcCCCccCCCCcE-EEEEE-eCeEEEEEEeccCCCCeeEeEEecCCcEEEEcC--CCeEEEEeCCCCcEE
Q 048538 57 SAVRIDYAPYGQNPPHTHPRATD-ILAVL-EGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPI--GLIHFQFNIGKTNAV 132 (181)
Q Consensus 57 ~~~~v~l~pg~~~~~H~H~~~~E-~~yVl-~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~--g~~H~~~N~g~~~~~ 132 (181)
.+....+.|+...++|-|. +.| +.||+ +|+++.. ++. |+ ...+++||+-.+-+ |+.|.-.|..+++++
T Consensus 41 ~ld~~~~~~~~Gf~~HPHr-g~EtVTyvl~~G~~~H~--DS~--Gn---~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~ 112 (290)
T 1j1l_A 41 LFDEFKGGRPGGFPDHPHR-GFETVSYLLEGGSMAHE--DFC--GH---TGKMNPGDLQWMTAGRGILHAEMPCSEEPAH 112 (290)
T ss_dssp EEEEEEECTTCBEEEEEEB-SEEEEEEECSSSCEEEE--ETT--SC---EEEECTTCEEEEECTTCEEEEEEECSSSCEE
T ss_pred EEEccccCCCCCCCCCCCC-CeEEEEEECcceEEEEe--eCC--CC---ceEECCCcEEEEeCCCCEEEEeEcCCCCCEE
Confidence 4556778898889999999 666 67999 9999875 332 23 58999999999998 568999998777888
Q ss_pred EEEEEc
Q 048538 133 AIAALS 138 (181)
Q Consensus 133 ~l~v~~ 138 (181)
.+-++-
T Consensus 113 ~lQlWv 118 (290)
T 1j1l_A 113 GLQLWV 118 (290)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 877664
No 148
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.52 E-value=0.012 Score=49.58 Aligned_cols=74 Identities=15% Similarity=0.150 Sum_probs=53.7
Q ss_pred cCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccC----------------------C----------CCeeEeEEecCCc
Q 048538 64 APYGQNPPHTHPRATDILAVLEGTLYVGFVTSNE----------------------L----------NNTLIAKVLKKGD 111 (181)
Q Consensus 64 ~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~----------------------~----------~~~~~~~~l~~GD 111 (181)
.+|+..++|+.+ ..-+..+++|+=++.+..+.. + .......+|+|||
T Consensus 191 ~~gs~t~~H~D~-~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD 269 (349)
T 3d8c_A 191 MEGNVTPAHYGE-QQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGD 269 (349)
T ss_dssp CTTCEEEEECCS-EEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEECTTC
T ss_pred CCCCCccceECC-hhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEECCCC
Confidence 566778999877 578888999998887764321 0 0024568899999
Q ss_pred EEEEcCCCeEEEEeCCC-CcEEEEEEEc
Q 048538 112 VFVFPIGLIHFQFNIGK-TNAVAIAALS 138 (181)
Q Consensus 112 ~i~ip~g~~H~~~N~g~-~~~~~l~v~~ 138 (181)
+++||+|..|+..|.++ ....-+.+..
T Consensus 270 ~LyiP~gWwH~V~~l~d~~~sisvn~w~ 297 (349)
T 3d8c_A 270 VLYIPMYWWHHIESLLNGGITITVNFWY 297 (349)
T ss_dssp EEEECTTCEEEEEECTTSCCEEEEEEEE
T ss_pred EEEECCCCcEEEEEcCCCCcEEEEEEEc
Confidence 99999999999999873 4444444443
No 149
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=96.37 E-value=0.015 Score=48.72 Aligned_cols=69 Identities=19% Similarity=0.181 Sum_probs=50.2
Q ss_pred cCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCC---------------------------CCeeEeEEecCCcEEEEc
Q 048538 64 APYGQNPPHTHPRATDILAVLEGTLYVGFVTSNEL---------------------------NNTLIAKVLKKGDVFVFP 116 (181)
Q Consensus 64 ~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~---------------------------~~~~~~~~l~~GD~i~ip 116 (181)
.+|+..++|+.. ..-+..+++|+=++.+..+... .......+|+|||++|||
T Consensus 175 ~~g~~~~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~LyiP 253 (338)
T 3al5_A 175 SPGLQLWTHYDV-MDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIP 253 (338)
T ss_dssp CTTCEEEEECCS-SEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCEEEEC
T ss_pred CCCCCccceECC-cccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCEEEEC
Confidence 455667889877 5677889999988877643200 011356889999999999
Q ss_pred CCCeEEEEeCCCCcEEEEE
Q 048538 117 IGLIHFQFNIGKTNAVAIA 135 (181)
Q Consensus 117 ~g~~H~~~N~g~~~~~~l~ 135 (181)
+|..|+..|.+ .+.-+.
T Consensus 254 ~gWwH~v~~l~--~sisvn 270 (338)
T 3al5_A 254 ALWFHNVISEE--FGVGVN 270 (338)
T ss_dssp TTCEEEEEESS--CEEEEE
T ss_pred CCCeEEEeeCC--CEEEEE
Confidence 99999999984 344444
No 150
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=96.23 E-value=0.064 Score=47.27 Aligned_cols=73 Identities=22% Similarity=0.336 Sum_probs=51.6
Q ss_pred cCCCc-CCCccCCCCcEEEEEEeCeEEEEEEeccCC-----------------CCeeEeEEecCCcEEEEcCCCeEEEEe
Q 048538 64 APYGQ-NPPHTHPRATDILAVLEGTLYVGFVTSNEL-----------------NNTLIAKVLKKGDVFVFPIGLIHFQFN 125 (181)
Q Consensus 64 ~pg~~-~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~-----------------~~~~~~~~l~~GD~i~ip~g~~H~~~N 125 (181)
++|+. .++|+-+ -+-++.-++|+=++.+..+... +.......|+|||++|+|+|.+|+..+
T Consensus 172 p~Gs~g~~pH~D~-~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~s 250 (489)
T 4diq_A 172 PPNSQGFAPHYDD-IEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAEC 250 (489)
T ss_dssp CSSBCCSCCBCCS-SEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEEB
T ss_pred CCCcccccCccCC-cceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEEe
Confidence 44443 4799877 6778888999888877653210 111245889999999999999999999
Q ss_pred CCCCcEEEEEEE
Q 048538 126 IGKTNAVAIAAL 137 (181)
Q Consensus 126 ~g~~~~~~l~v~ 137 (181)
.++....-+.+-
T Consensus 251 ~~~~~SlhlTi~ 262 (489)
T 4diq_A 251 QDGVHSLHLTLS 262 (489)
T ss_dssp CSSCCEEEEEEE
T ss_pred cCCCceEEEeec
Confidence 876555444443
No 151
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=96.11 E-value=0.074 Score=46.28 Aligned_cols=63 Identities=25% Similarity=0.313 Sum_probs=46.7
Q ss_pred cCCCcC-CCccCCCCcEEEEEEeCeEEEEEEeccC---C----------CCeeEeEEecCCcEEEEcCCCeEEEEeCC
Q 048538 64 APYGQN-PPHTHPRATDILAVLEGTLYVGFVTSNE---L----------NNTLIAKVLKKGDVFVFPIGLIHFQFNIG 127 (181)
Q Consensus 64 ~pg~~~-~~H~H~~~~E~~yVl~G~~~~~v~~~~~---~----------~~~~~~~~l~~GD~i~ip~g~~H~~~N~g 127 (181)
++|+.. ++|+-. ..-++..++|+=++.+..+.. . +......+|+|||++|+|+|.+|+.++.+
T Consensus 147 ~~g~~g~~~H~D~-~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 147 PAGSQGLPPHYDD-VEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp CTTCBCSCSEECS-SEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred CCCCCCccceECC-cceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 444443 799877 677888999998888765420 0 01134678999999999999999999875
No 152
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=96.11 E-value=0.052 Score=44.31 Aligned_cols=94 Identities=17% Similarity=0.173 Sum_probs=60.5
Q ss_pred EEEeecCCCCCCccCceEEEEEEEcCCCc---CCCccCCCC--c------EEEEE-Ee---CeEEEEEEeccCCCCeeEe
Q 048538 40 VKIANVEQIPGLNTLGISAVRIDYAPYGQ---NPPHTHPRA--T------DILAV-LE---GTLYVGFVTSNELNNTLIA 104 (181)
Q Consensus 40 ~~~~~~~~~p~l~~~~~~~~~v~l~pg~~---~~~H~H~~~--~------E~~yV-l~---G~~~~~v~~~~~~~~~~~~ 104 (181)
+......+.| .-.+.+..+ +.||+. .|||.|+.. . |+.|- +. |-+...+-.++ +.-.+.
T Consensus 140 V~~i~~~~~~---a~~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d--~~~de~ 213 (270)
T 2qjv_A 140 VHNILPDSQL---ADSLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDD--RSLDEC 213 (270)
T ss_dssp EEEEECTTSC---CSSCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTT--SSSEEE
T ss_pred hhhhcCCCCC---cceEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCC--CCCceE
Confidence 4444444433 335666766 778764 599999932 3 88764 33 43333332221 122347
Q ss_pred EEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCC
Q 048538 105 KVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSSQ 140 (181)
Q Consensus 105 ~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~ 140 (181)
..++-||++.+|.|. |...........+|+++..+
T Consensus 214 ~~V~~~d~VlvP~Gy-Hp~~a~pGy~~YylwvMaG~ 248 (270)
T 2qjv_A 214 MAVYNRDVVXVPXGY-HPVATIAGYDNYYLNVMAGP 248 (270)
T ss_dssp EEEETTCEEEESSSB-CCEEECTTCEEEEEEEEECS
T ss_pred EEEECCCEEecCCCc-CCCcCCCCcccEEEEEEECC
Confidence 999999999999999 98766555677799988864
No 153
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=96.06 E-value=0.088 Score=41.16 Aligned_cols=75 Identities=8% Similarity=-0.072 Sum_probs=52.6
Q ss_pred EcCCCcCCCccCC---CCcEEEEEEeCeEEEEEEeccCCC---CeeEeEEecC--CcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 63 YAPYGQNPPHTHP---RATDILAVLEGTLYVGFVTSNELN---NTLIAKVLKK--GDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 63 l~pg~~~~~H~H~---~~~E~~yVl~G~~~~~v~~~~~~~---~~~~~~~l~~--GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
-.+|....+|+|. ....+++|++|++.-.+++--..+ ++-....|.+ +-.++||+|..|.+.+.++. +.++
T Consensus 51 S~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~-a~~~ 129 (201)
T 4hn1_A 51 SHRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD-ATLV 129 (201)
T ss_dssp ECTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT-EEEE
T ss_pred cCCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC-eEEE
Confidence 4789999999985 478999999999765555421000 1113455665 78999999999999998764 5555
Q ss_pred EEEc
Q 048538 135 AALS 138 (181)
Q Consensus 135 ~v~~ 138 (181)
...+
T Consensus 130 Y~~t 133 (201)
T 4hn1_A 130 FLCS 133 (201)
T ss_dssp EEES
T ss_pred EeCC
Confidence 4444
No 154
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=95.79 E-value=0.33 Score=38.45 Aligned_cols=133 Identities=11% Similarity=0.093 Sum_probs=83.0
Q ss_pred cCCCeEEEEeecCCCC-----CCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCe-EEEEEEeccCCCC-------
Q 048538 34 NRLGFSVKIANVEQIP-----GLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGT-LYVGFVTSNELNN------- 100 (181)
Q Consensus 34 ~~~g~~~~~~~~~~~p-----~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~-~~~~v~~~~~~~~------- 100 (181)
++=||++.+.+..... .-.....+..++-+.+|..+.||.-. +.|+.+-..|. +++.+...+ |+
T Consensus 33 HPEGG~yrEt~Rs~~~v~~~~~~~R~~~TaIYfLL~~g~~S~~HRv~-sdEiW~~h~G~pL~l~li~~d--G~~~~~~~~ 109 (225)
T 3m3i_A 33 HPEGGYYSEVVRSAHKVDNEEGNRRHAYTTIYFLCTPESPSHLHRLC-SDETWMYHAGDPLQLHVILKD--PQDEDRIAA 109 (225)
T ss_dssp CTTSSEEEEEEECSSEEECTTSCEEESCEEEEEEECSSSCEEEEECS-SEEEEEEEEESCEEEEEEESS--STTTTC---
T ss_pred CCCCceEEEEEECCCcccCCCCCCcccceeEEEEecCCCCcccEEec-CCEEEEEECCCCEEEEEEcCC--Ccccccccc
Confidence 6678888888876432 11112345666778999877666666 89999999997 567665432 10
Q ss_pred --------------------eeEeEEec----CCc--EEEEcCCCeEEEEeCCCC-----cEEEEEEEcCCC--Cceeee
Q 048538 101 --------------------TLIAKVLK----KGD--VFVFPIGLIHFQFNIGKT-----NAVAIAALSSQN--PGVITI 147 (181)
Q Consensus 101 --------------------~~~~~~l~----~GD--~i~ip~g~~H~~~N~g~~-----~~~~l~v~~~~~--~g~~~~ 147 (181)
...+..|. +|+ -++||+|+....+..++. .-.++.+...+. +..|.+
T Consensus 110 ~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCtVaPGFdF~DFel 189 (225)
T 3m3i_A 110 QPPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCIVSPGFDYRDFEI 189 (225)
T ss_dssp ---------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEEEESCCCGGGCEE
T ss_pred cccccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEEEcCCccchhcEe
Confidence 22445554 455 578999999888766543 344444433332 222222
Q ss_pred ecchhcCCCCCCHHHHHHHcCCCHHHHHHHHh
Q 048538 148 ANSVFGANPPINPDFLAKAFQLDVDVVKDLEA 179 (181)
Q Consensus 148 ~~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~ 179 (181)
++++.|.+.|-..++.|++|-.
T Consensus 190 ----------~~~~~L~~~~P~~~~~I~~lt~ 211 (225)
T 3m3i_A 190 ----------FTQAQLMELYPQHEAVIKQMAY 211 (225)
T ss_dssp ----------CBHHHHHHHCGGGHHHHHHHSB
T ss_pred ----------cCHHHHHHHCchHHHHHHHhch
Confidence 4567777778777777777643
No 155
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=95.61 E-value=0.53 Score=35.83 Aligned_cols=128 Identities=11% Similarity=0.104 Sum_probs=83.3
Q ss_pred cCC-CeEEEEeecCCC----CCC--ccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCe-EEEEEEeccCCCCeeEeE
Q 048538 34 NRL-GFSVKIANVEQI----PGL--NTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGT-LYVGFVTSNELNNTLIAK 105 (181)
Q Consensus 34 ~~~-g~~~~~~~~~~~----p~l--~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~-~~~~v~~~~~~~~~~~~~ 105 (181)
++- ||++++.+.... +.. .....+..++-+.+|....+|.-. ++|+.+-..|. +++.+..++ ++..+.
T Consensus 24 HPEEGG~yrEt~rs~~~v~~~~~~~~R~~~TaIYfLL~~~~~S~~HRv~-sdEiW~~~~G~pL~l~~~~~d---G~~~~~ 99 (172)
T 3loi_A 24 HPASGGWFRETYRSDVQVEAEGFDGKRSVLTMIYYLMQAGQPDPFHRVK-SDETFVHNLGGSMKIHMIHPD---GSYSCS 99 (172)
T ss_dssp CTTSSSEEEEEEECSCEECCTTSSSCEESCEEEEEEEETTCCEEEEECS-SEEEEEEEEESCEEEEEECTT---SCEEEE
T ss_pred CCcCCCeEEEEEECcCcccCCCCCCCcccceEEEEEEcCCCCccCEEec-CCEEEEEEcCCCEEEEEEcCC---CceEEE
Confidence 666 888888887642 111 122345666778999877777666 89999999996 577776553 333455
Q ss_pred Ee----cCCc---EEEEcCCCeEEEEeCCCCcEEEEEEEcCCC--CceeeeecchhcCCCCCCHHHHHHHcCCCHHHHHH
Q 048538 106 VL----KKGD---VFVFPIGLIHFQFNIGKTNAVAIAALSSQN--PGVITIANSVFGANPPINPDFLAKAFQLDVDVVKD 176 (181)
Q Consensus 106 ~l----~~GD---~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~--~g~~~~~~s~~~~~~~~~~e~l~~~~~v~~~~~~~ 176 (181)
.| .+|+ -++||+|+....+. + .-.++.+...+. +..+.+ .+++.|.+.|-..++.+++
T Consensus 100 ~LG~d~~~Ge~~pQ~vVP~G~WqaA~~-~--~~~LVsctVaPGF~f~dfel----------~~~~~L~~~~P~~~~~I~~ 166 (172)
T 3loi_A 100 ILGNPLEHPEARHQVVVPRRVWFAQEV-D--GYCLASVLVAPGFDFKDFSL----------GKREELIKEYPQHRDVIMR 166 (172)
T ss_dssp EESCTTTSTTCBSEEEECTTCEEEEEE-S--SEEEEEEEEESCCCGGGCEE----------CCHHHHHHHCGGGHHHHHH
T ss_pred EeCCCcccCCcceEEEECCCEEEEEEe-C--CcEEEEEEEcCCccchhcEE----------cCHHHHHHHCchHHHHHHH
Confidence 55 4577 78899999988777 3 334444333332 222222 4677788888888888887
Q ss_pred HH
Q 048538 177 LE 178 (181)
Q Consensus 177 ~~ 178 (181)
|.
T Consensus 167 lt 168 (172)
T 3loi_A 167 CT 168 (172)
T ss_dssp TS
T ss_pred hc
Confidence 64
No 156
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=95.58 E-value=0.08 Score=46.27 Aligned_cols=56 Identities=7% Similarity=-0.009 Sum_probs=44.2
Q ss_pred CccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 048538 71 PHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAA 136 (181)
Q Consensus 71 ~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v 136 (181)
.-....+++++++-+|++.++-.- ....+++||.++||+|+.+++.-.+ +++.+++
T Consensus 172 ~f~NaDGD~Livpq~G~l~i~TEf--------G~L~v~pgei~VIPRGi~frv~l~~--p~Rgyi~ 227 (471)
T 1eyb_A 172 CFYNSDGDFLIVPQKGNLLIYTEF--------GKMLVQPNEICVIQRGMRFSIDVFE--ETRGYIL 227 (471)
T ss_dssp EEEESSEEEEEEEEESCEEEEETT--------EEEEECTTEEEEECTTCCEEEECSS--SEEEEEE
T ss_pred eeecCCCCEEEEEEeCCEEEEEec--------ccEEeccCCEEEECCccEEEEeeCC--CceEEEE
Confidence 344555999999999999997532 1588999999999999999987765 6665543
No 157
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=95.47 E-value=0.013 Score=48.48 Aligned_cols=110 Identities=10% Similarity=0.108 Sum_probs=62.8
Q ss_pred EEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCC----CeeEeEEecCCcEEEEcCCCeEEEEeCCCCc-E
Q 048538 57 SAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELN----NTLIAKVLKKGDVFVFPIGLIHFQFNIGKTN-A 131 (181)
Q Consensus 57 ~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~----~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~-~ 131 (181)
.+.++.+.||+...+|.=+ .++.+...|..++++.-....+ -.+..+.+++|+++++....+|+..|.|+++ .
T Consensus 92 ~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~GE~w~~d~~~~H~v~N~g~~~RI 169 (290)
T 1e5r_A 92 QMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRPGEIWFLDAATVHSAVNFSEISRQ 169 (290)
T ss_dssp EEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTEEECCCTTEEEECCTTSCEEEEESSSSCCC
T ss_pred heEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCEEEecCCCCEEEEcCCCeeEEEcCCCCCeE
Confidence 6677799999999888333 3555555677777665432100 0023688999999999999999999998754 4
Q ss_pred EEEEEE--cC-CCCcee-ee----ecc---hhcCCCCCCHHHHHHHcC
Q 048538 132 VAIAAL--SS-QNPGVI-TI----ANS---VFGANPPINPDFLAKAFQ 168 (181)
Q Consensus 132 ~~l~v~--~~-~~~g~~-~~----~~s---~~~~~~~~~~e~l~~~~~ 168 (181)
++++=+ .. ..+..+ .- ... ....+|+++++.+++..+
T Consensus 170 hLv~D~~~~~~~wl~~lf~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 217 (290)
T 1e5r_A 170 SLCVDFAFDGPFDEKEIFADATLYAPGSTPDLPERRPFTAEHRRRILS 217 (290)
T ss_dssp EEEEEEBCSSCCCGGGGBSSGGGBCTTCCCCCCCCEECCHHHHHHHHG
T ss_pred EEEEEecccCCcCHHHHHhhcccCCcccCcccccCCCCCHHHHHHHHH
Confidence 444433 21 111111 00 000 122356789999887543
No 158
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=95.06 E-value=0.11 Score=35.67 Aligned_cols=63 Identities=14% Similarity=0.029 Sum_probs=47.3
Q ss_pred EcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 048538 63 YAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAA 136 (181)
Q Consensus 63 l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v 136 (181)
+.||. .+......|+.-|++|++++.+.++ .....+++||.+.||++.--.++.. ++..++|.
T Consensus 30 m~pGe---ytF~T~~~E~M~vvsG~~~V~lpg~------~ew~~~~aGesF~Vpans~F~l~v~--~~~~YlC~ 92 (94)
T 2oyz_A 30 MLPGE---YTFGTQAPERMTVVKGALVVKRVGE------ADWTTYSSGESFDVEGNSSFELQVK--DATAYLCE 92 (94)
T ss_dssp ECSEE---EEEEESSCEEEEEEESEEEEEETTC------SSCEEEETTCEEEECSSEEEEEEES--SCEEEEEE
T ss_pred EeceE---EEEcCCCeEEEEEEEeEEEEEcCCC------CcCEEECCCCEEEECCCCEEEEEEc--ccEeEEEE
Confidence 56664 2333447899999999999998633 2378999999999999998888774 44555554
No 159
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=94.82 E-value=0.073 Score=46.49 Aligned_cols=67 Identities=19% Similarity=0.139 Sum_probs=49.9
Q ss_pred EcCCCcCCCccCCCCc-EEEEEEeCeEEEEEEeccCC----------------------CCeeEeEEecCCcEEEEcCCC
Q 048538 63 YAPYGQNPPHTHPRAT-DILAVLEGTLYVGFVTSNEL----------------------NNTLIAKVLKKGDVFVFPIGL 119 (181)
Q Consensus 63 l~pg~~~~~H~H~~~~-E~~yVl~G~~~~~v~~~~~~----------------------~~~~~~~~l~~GD~i~ip~g~ 119 (181)
=.+|+..+.|..+.+. -+..+++|+=.+.+..+... -.+....++++||+++||+|.
T Consensus 203 Gp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGW 282 (451)
T 2yu1_A 203 SVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGW 282 (451)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTC
T ss_pred ccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCc
Confidence 4667778999887443 45679999988877654310 013456889999999999999
Q ss_pred eEEEEeCCCC
Q 048538 120 IHFQFNIGKT 129 (181)
Q Consensus 120 ~H~~~N~g~~ 129 (181)
.|...|..+.
T Consensus 283 wH~V~nleds 292 (451)
T 2yu1_A 283 IHAVYTPTDT 292 (451)
T ss_dssp EEEEECSSCE
T ss_pred eEEEecCCCe
Confidence 9999998543
No 160
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=94.44 E-value=0.16 Score=42.50 Aligned_cols=65 Identities=17% Similarity=0.240 Sum_probs=47.7
Q ss_pred cCCCcCCCccCCCC-cEEEEEEeCeEEEEEEeccCC-----------C-------------------------CeeEeEE
Q 048538 64 APYGQNPPHTHPRA-TDILAVLEGTLYVGFVTSNEL-----------N-------------------------NTLIAKV 106 (181)
Q Consensus 64 ~pg~~~~~H~H~~~-~E~~yVl~G~~~~~v~~~~~~-----------~-------------------------~~~~~~~ 106 (181)
.+|+..++|++... .-+..++.|+=++.+..+... | .......
T Consensus 180 ~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~~~~~ 259 (336)
T 3k2o_A 180 PPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEIL 259 (336)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCCEEEE
T ss_pred CCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCceEEEE
Confidence 45667889988733 257889999877777643210 0 1124578
Q ss_pred ecCCcEEEEcCCCeEEEEeCCC
Q 048538 107 LKKGDVFVFPIGLIHFQFNIGK 128 (181)
Q Consensus 107 l~~GD~i~ip~g~~H~~~N~g~ 128 (181)
++|||++++|+|..|+..|.++
T Consensus 260 l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 260 QKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp ECTTCEEEECTTCEEEEEESSC
T ss_pred ECCCCEEEeCCCCcEEEecCCC
Confidence 9999999999999999999864
No 161
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=94.33 E-value=0.44 Score=39.01 Aligned_cols=82 Identities=18% Similarity=0.216 Sum_probs=53.3
Q ss_pred ceEEEEEEEcCCC---cCCCccCCCCcEEEEEEe---CeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCC
Q 048538 55 GISAVRIDYAPYG---QNPPHTHPRATDILAVLE---GTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGK 128 (181)
Q Consensus 55 ~~~~~~v~l~pg~---~~~~H~H~~~~E~~yVl~---G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~ 128 (181)
.+.+....+.||+ ..|+|.|....|.+|=-+ ....+++.... ++.....++-||++.+|+..+|. ..|.
T Consensus 179 qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv~q~~g~p---~Etrhi~V~n~daVlvP~wh~h~--~~G~ 253 (282)
T 1xru_A 179 QLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFHMMGQP---QETRHIVMHNEQAVISPSWSIHS--GVGT 253 (282)
T ss_dssp SCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCEEEEEEET---TEEEEEEECSSEEEEECTTCEEE--EEES
T ss_pred hEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEEEEEeCCC---CCeeEEEEECCCEEEeCCCCCCC--CCCc
Confidence 5567777788887 369999996566655433 22333433332 33333568999999999766776 3365
Q ss_pred CcEEEEEEEcCCC
Q 048538 129 TNAVAIAALSSQN 141 (181)
Q Consensus 129 ~~~~~l~v~~~~~ 141 (181)
+...+|+++..++
T Consensus 254 ~~Y~ylwvMAG~n 266 (282)
T 1xru_A 254 KAYTFIWGMVGEN 266 (282)
T ss_dssp SCCEEEEEEEESC
T ss_pred cceEEEEEEEcCC
Confidence 6667888887544
No 162
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=94.02 E-value=0.28 Score=34.67 Aligned_cols=67 Identities=13% Similarity=0.150 Sum_probs=49.9
Q ss_pred EEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEE
Q 048538 62 DYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAAL 137 (181)
Q Consensus 62 ~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~ 137 (181)
.+.||. .+.+......|+.-|++|++++.+.+. .....+++|+.+.||++.--.++.. ++..++|-+
T Consensus 43 Vm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~------~eW~~~~aGesF~VpanssF~lkv~--~~~~Y~C~y 109 (111)
T 3hqx_A 43 VILPTE-QPLTFETHVPERMEIISGECRVKIADS------TESELFRAGQSFYVPGNSLFKIETD--EVLDYVCHL 109 (111)
T ss_dssp EECCCS-SCEEEECSSCEEEEEEESEEEEEETTC------SSCEEEETTCEEEECTTCEEEEECS--SCEEEEEEE
T ss_pred EEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCc------ccCEEeCCCCEEEECCCCcEEEEEC--cceeEEEEc
Confidence 367773 123444457899999999999998643 2378999999999999999888774 566666644
No 163
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=94.00 E-value=0.18 Score=39.20 Aligned_cols=70 Identities=17% Similarity=0.151 Sum_probs=49.9
Q ss_pred EEEEEEEcCCCcCCCccCCCCcEE----EEEEeC-eEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcE
Q 048538 57 SAVRIDYAPYGQNPPHTHPRATDI----LAVLEG-TLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNA 131 (181)
Q Consensus 57 ~~~~v~l~pg~~~~~H~H~~~~E~----~yVl~G-~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~ 131 (181)
.+....+.||+...+|..+....+ ..++-. ...+.++ + +++..++|+.+++.-...|..+|.++++-
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~------~--~~~~w~eGe~~~fDds~~Hev~N~~d~~R 174 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCA------N--ETKTWEEGKVLIFDDSFEHEVWQDASSFR 174 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEET------T--EEECCCBTCEEEECTTSCEEEEECSSSCE
T ss_pred eEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEEC------C--EEEEeeCCcEEEEcCCeEEEEEECCCCCE
Confidence 466677999999999987733322 222222 3455543 2 26889999999999999999999988764
Q ss_pred EEE
Q 048538 132 VAI 134 (181)
Q Consensus 132 ~~l 134 (181)
+++
T Consensus 175 vvL 177 (197)
T 3rcq_A 175 LIF 177 (197)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 164
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=93.76 E-value=0.096 Score=46.18 Aligned_cols=66 Identities=18% Similarity=0.144 Sum_probs=49.5
Q ss_pred EcCCCcCCCccCCCCc-EEEEEEeCeEEEEEEeccC-C---------------------CCeeEeEEecCCcEEEEcCCC
Q 048538 63 YAPYGQNPPHTHPRAT-DILAVLEGTLYVGFVTSNE-L---------------------NNTLIAKVLKKGDVFVFPIGL 119 (181)
Q Consensus 63 l~pg~~~~~H~H~~~~-E~~yVl~G~~~~~v~~~~~-~---------------------~~~~~~~~l~~GD~i~ip~g~ 119 (181)
=.+|+..++|....+. -+..+++|+=++.+..+.. + ..+.....++|||.++||+|.
T Consensus 273 G~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGW 352 (488)
T 3kv5_D 273 GVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGW 352 (488)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTC
T ss_pred cCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCc
Confidence 4677788999987433 3568999998888775421 0 113456789999999999999
Q ss_pred eEEEEeCCC
Q 048538 120 IHFQFNIGK 128 (181)
Q Consensus 120 ~H~~~N~g~ 128 (181)
.|+..|..+
T Consensus 353 wH~V~nled 361 (488)
T 3kv5_D 353 IHAVLTSQD 361 (488)
T ss_dssp EEEEEEEEE
T ss_pred eEEeeCCCC
Confidence 999999743
No 165
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=93.60 E-value=0.18 Score=43.98 Aligned_cols=66 Identities=17% Similarity=0.146 Sum_probs=49.3
Q ss_pred EcCCCcCCCccCCCCc-EEEEEEeCeEEEEEEeccCC----------------------CCeeEeEEecCCcEEEEcCCC
Q 048538 63 YAPYGQNPPHTHPRAT-DILAVLEGTLYVGFVTSNEL----------------------NNTLIAKVLKKGDVFVFPIGL 119 (181)
Q Consensus 63 l~pg~~~~~H~H~~~~-E~~yVl~G~~~~~v~~~~~~----------------------~~~~~~~~l~~GD~i~ip~g~ 119 (181)
=.+|+....|...++. -+..|++|+=++.+..+... ..+..+..++|||.++||+|.
T Consensus 238 G~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGW 317 (447)
T 3kv4_A 238 SVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGW 317 (447)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTC
T ss_pred eCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCC
Confidence 4667788999877443 35679999988877654310 012356789999999999999
Q ss_pred eEEEEeCCC
Q 048538 120 IHFQFNIGK 128 (181)
Q Consensus 120 ~H~~~N~g~ 128 (181)
.|+..|..+
T Consensus 318 wH~V~nled 326 (447)
T 3kv4_A 318 IHAVLTPVD 326 (447)
T ss_dssp EEEEEESSC
T ss_pred eEEEecCCC
Confidence 999999854
No 166
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=93.31 E-value=0.5 Score=33.80 Aligned_cols=68 Identities=18% Similarity=0.109 Sum_probs=42.5
Q ss_pred CCccCC-CCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEc
Q 048538 70 PPHTHP-RATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALS 138 (181)
Q Consensus 70 ~~H~H~-~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~ 138 (181)
..|.-. +-...+-|++|++.+..-.+.+...-.....+.+|+..++|+...|.+...+|..+ .|.++.
T Consensus 30 ~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f-~leFyc 98 (119)
T 3dl3_A 30 THHNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQF-NINFWS 98 (119)
T ss_dssp SSBCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEE-EEEEEE
T ss_pred hccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEE-EEEEEE
Confidence 345433 23355789999999986432200001245789999999999999999994433332 233444
No 167
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=93.17 E-value=0.81 Score=36.48 Aligned_cols=76 Identities=8% Similarity=-0.042 Sum_probs=49.9
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+..++++||+....-...+-.-++||++|++++. + ..+.+||.+.+..+..-.+.+. ++++++
T Consensus 159 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v~--------g----~~l~~gd~~~~~~~~~l~l~a~--~~a~~L 224 (242)
T 1tq5_A 159 DMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTIN--------G----VKASTSDGLAIWDEQAISIHAD--SDSEVL 224 (242)
T ss_dssp SCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEET--------T----EEEETTCEEEEESCSCEEEEES--SSEEEE
T ss_pred CCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEEC--------C----EEeCCCCEEEECCCCeEEEEeC--CCCEEE
Confidence 5567778899998753333343446799999998761 1 4699999999987765566663 567777
Q ss_pred EEEcCCCCce
Q 048538 135 AALSSQNPGV 144 (181)
Q Consensus 135 ~v~~~~~~g~ 144 (181)
.+-.....++
T Consensus 225 l~~~~~~~~~ 234 (242)
T 1tq5_A 225 LFDLPPVSGR 234 (242)
T ss_dssp EEEECCC---
T ss_pred EEECCccCCh
Confidence 5543433333
No 168
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=93.05 E-value=0.36 Score=39.67 Aligned_cols=82 Identities=20% Similarity=0.201 Sum_probs=45.0
Q ss_pred ceEEEEEEEcCCCc---CCCccCCCCcEEEEEEe---CeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCC
Q 048538 55 GISAVRIDYAPYGQ---NPPHTHPRATDILAVLE---GTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGK 128 (181)
Q Consensus 55 ~~~~~~v~l~pg~~---~~~H~H~~~~E~~yVl~---G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~ 128 (181)
.+.+....+.||+. .|+|.|+...|.+|=-+ ....+++.++- ++.....++-||++.+|++-.|.. .|.
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~v~h~~g~p---dEtrh~~V~n~daVlvP~wgyHp~--~Gt 253 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRIFHMMGKP---DETKHLVMSNEQAAISPSWSIHSG--VGT 253 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCCEEEEESST---TSCEEEEECTTEEEEECTTSCCCE--EES
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCeEEEECCCC---CceEEEEEECCCEEEeCCCcccCC--CCC
Confidence 55677777888873 59999996666665332 12333433222 333336789999999999888852 333
Q ss_pred CcEEEEEEEcCCC
Q 048538 129 TNAVAIAALSSQN 141 (181)
Q Consensus 129 ~~~~~l~v~~~~~ 141 (181)
..-.+|+++..++
T Consensus 254 ~~Y~ylwvMAG~n 266 (289)
T 1ywk_A 254 SNYSFIWAMCGEN 266 (289)
T ss_dssp SCCEEEEEEECC-
T ss_pred cCeEEEEEEEcCC
Confidence 4445888877654
No 169
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=92.91 E-value=0.13 Score=43.76 Aligned_cols=65 Identities=17% Similarity=0.164 Sum_probs=48.9
Q ss_pred EcCCCcCCCccCCCCcE-EEEEEeCeEEEEEEeccCC----------------------CCeeEeEEecCCcEEEEcCCC
Q 048538 63 YAPYGQNPPHTHPRATD-ILAVLEGTLYVGFVTSNEL----------------------NNTLIAKVLKKGDVFVFPIGL 119 (181)
Q Consensus 63 l~pg~~~~~H~H~~~~E-~~yVl~G~~~~~v~~~~~~----------------------~~~~~~~~l~~GD~i~ip~g~ 119 (181)
=++|+..+.|....+.- +..+++|+=++.+..+... ..+..+..++|||.++||+|.
T Consensus 154 Gp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGW 233 (371)
T 3k3o_A 154 SVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGW 233 (371)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTC
T ss_pred cCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCC
Confidence 46777889998874443 5679999988877643210 023456889999999999999
Q ss_pred eEEEEeCC
Q 048538 120 IHFQFNIG 127 (181)
Q Consensus 120 ~H~~~N~g 127 (181)
.|+..|..
T Consensus 234 wH~V~nle 241 (371)
T 3k3o_A 234 IHAVLTPV 241 (371)
T ss_dssp EEEEEEEE
T ss_pred eEEEecCC
Confidence 99999974
No 170
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=92.84 E-value=2.2 Score=31.75 Aligned_cols=110 Identities=11% Similarity=0.075 Sum_probs=70.6
Q ss_pred cCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccC-CCCcEEEEEEeCe-EEEEEEeccCCCCeeEeEEec---
Q 048538 34 NRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTH-PRATDILAVLEGT-LYVGFVTSNELNNTLIAKVLK--- 108 (181)
Q Consensus 34 ~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H-~~~~E~~yVl~G~-~~~~v~~~~~~~~~~~~~~l~--- 108 (181)
++-||++++.+.....+ .....+..++-+.+|....+|.- . ++|+.+-..|. +++.+..++ +...+..|.
T Consensus 19 HPEGG~yrEt~Rs~~~~-~R~~~TaIYfLL~~g~~S~wHRv~~-sdEiW~~h~G~pL~l~~~~~d---g~~~~~~LG~d~ 93 (154)
T 1znp_A 19 HPEGGFYHQTFRDKAGG-ERGHSTAIYYLLEKGVRSHWHRVTD-AVEVWHYYAGAPIALHLSQDG---REVQTFTLGPAI 93 (154)
T ss_dssp CTTSSEEEEEEECSSST-TTCSCEEEEEEEESSCCEEEEEETT-SCEEEEEEEESCEEEEEESSS---SCCEEEEESSCT
T ss_pred CCCCccEEEEEeCCCCC-CCcceeEEEEEecCCCCCcceeccC-CCEEEEeECCCCEEEEEEcCC---CcEEEEEeCCCc
Confidence 66788888888764321 12234556666788888888775 5 99999999997 777665442 233445554
Q ss_pred -CCcE--EEEcCCCeEEEEeCCCCcEEEEEEEcCC--CCceeeeecc
Q 048538 109 -KGDV--FVFPIGLIHFQFNIGKTNAVAIAALSSQ--NPGVITIANS 150 (181)
Q Consensus 109 -~GD~--i~ip~g~~H~~~N~g~~~~~~l~v~~~~--~~g~~~~~~s 150 (181)
+|+. ++||+|+....+..+ .-.++.+...+ ++..+++++.
T Consensus 94 ~~Ge~pQ~vVP~G~WqaA~~~g--~~~LVsCtVaPGF~f~dFel~~~ 138 (154)
T 1znp_A 94 LEGERPQVIVPANCWQSAESLG--DFTLVGCTVSPGFAFSSFVMAEP 138 (154)
T ss_dssp TTTEESEEEECTTCEEEEEESS--SEEEEEEEESSCCCGGGEEECCT
T ss_pred ccCcccEEEEcCCEEEEeeECC--CeEEEEEEecCCCcccccEecCC
Confidence 4653 789999999887664 34444444444 3455555543
No 171
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=92.44 E-value=0.21 Score=42.92 Aligned_cols=65 Identities=18% Similarity=0.144 Sum_probs=49.0
Q ss_pred EcCCCcCCCccCCCCc-EEEEEEeCeEEEEEEeccC-C---------------------CCeeEeEEecCCcEEEEcCCC
Q 048538 63 YAPYGQNPPHTHPRAT-DILAVLEGTLYVGFVTSNE-L---------------------NNTLIAKVLKKGDVFVFPIGL 119 (181)
Q Consensus 63 l~pg~~~~~H~H~~~~-E~~yVl~G~~~~~v~~~~~-~---------------------~~~~~~~~l~~GD~i~ip~g~ 119 (181)
=.+|+..+.|....+. -+..+++|+=++.+..+.. + ..+..+..+++||.++||+|.
T Consensus 182 Gp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW 261 (397)
T 3kv9_A 182 GVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGW 261 (397)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTC
T ss_pred cCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCC
Confidence 3667788999988444 3568999998887775431 0 023456789999999999999
Q ss_pred eEEEEeCC
Q 048538 120 IHFQFNIG 127 (181)
Q Consensus 120 ~H~~~N~g 127 (181)
.|+..|..
T Consensus 262 ~H~V~nle 269 (397)
T 3kv9_A 262 IHAVLTSQ 269 (397)
T ss_dssp EEEEEEEE
T ss_pred eEEccCCc
Confidence 99999973
No 172
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=92.22 E-value=0.56 Score=40.73 Aligned_cols=74 Identities=11% Similarity=0.073 Sum_probs=47.2
Q ss_pred ceEEEEEEEc--CCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEe-EEecCCcEEEEcCCCeEEEEeCC---C
Q 048538 55 GISAVRIDYA--PYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIA-KVLKKGDVFVFPIGLIHFQFNIG---K 128 (181)
Q Consensus 55 ~~~~~~v~l~--pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~-~~l~~GD~i~ip~g~~H~~~N~g---~ 128 (181)
.+.+.++++. ++.....-.+. +..++.|++|++++...+ .+ .. ..|++||+++||++..-.+.+.+ .
T Consensus 356 eF~v~~~~~~~~~~~~~~~~~~~-~~~illv~~G~g~i~~~~-----~~-~~~~~l~~G~~~fvpa~~~~~i~g~~~~~~ 428 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQVIEGLN-GPSIVIATNGKGTIQITG-----DD-STKQKIDTGYVFFVAPGSSIELTADSANQD 428 (440)
T ss_dssp SCEEEEEECCTTTCCEEEECCCS-SCEEEEEEESEEEEEETT-----CG-GGCEEEETTCEEEECTTCCEEEEECSSCCS
T ss_pred eEEEEEEEecCCCCceeEEecCC-CcEEEEEEeCeEEEEeCC-----cc-cceEEeccCCEEEEeCCCcEEEEEecccCC
Confidence 4677778877 34221111234 778999999999987521 10 12 68999999999999655566641 3
Q ss_pred CcEEEEE
Q 048538 129 TNAVAIA 135 (181)
Q Consensus 129 ~~~~~l~ 135 (181)
+.++++.
T Consensus 429 ~~~~~~~ 435 (440)
T 1pmi_A 429 QDFTTYR 435 (440)
T ss_dssp SCCEEEE
T ss_pred CcEEEEE
Confidence 4444443
No 173
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=92.19 E-value=0.26 Score=42.28 Aligned_cols=65 Identities=14% Similarity=0.147 Sum_probs=49.1
Q ss_pred EcCCCcCCCccCCCCc-EEEEEEeCeEEEEEEeccCC----------------------CCeeEeEEecCCcEEEEcCCC
Q 048538 63 YAPYGQNPPHTHPRAT-DILAVLEGTLYVGFVTSNEL----------------------NNTLIAKVLKKGDVFVFPIGL 119 (181)
Q Consensus 63 l~pg~~~~~H~H~~~~-E~~yVl~G~~~~~v~~~~~~----------------------~~~~~~~~l~~GD~i~ip~g~ 119 (181)
=++|+....|....+. -+..+++|+=.+.+..+... ..+.....+++||.++||+|.
T Consensus 181 Gp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGW 260 (392)
T 3pua_A 181 CVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGW 260 (392)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTC
T ss_pred eCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCc
Confidence 4677788999877443 46689999988877654310 013457889999999999999
Q ss_pred eEEEEeCC
Q 048538 120 IHFQFNIG 127 (181)
Q Consensus 120 ~H~~~N~g 127 (181)
.|+..|..
T Consensus 261 wH~V~nle 268 (392)
T 3pua_A 261 IYATLTPV 268 (392)
T ss_dssp EEEEEEEE
T ss_pred eEEEecCC
Confidence 99999974
No 174
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=91.85 E-value=3.1 Score=33.98 Aligned_cols=100 Identities=12% Similarity=0.119 Sum_probs=58.6
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+..++++||+........+..-++||++|++++. +. +. ...+.++..++...|..-.+.+..+++++++
T Consensus 168 ~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~--g~----~~--~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~L 239 (290)
T 1j1l_A 168 PTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG--PD----DA--QQKIEPHHTAVLGEGDSVQVENKDPKRSHFV 239 (290)
T ss_dssp CEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES--CT----TS--CEEECTTEEEEECSCSEEEEECCSSSCEEEE
T ss_pred CcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC--Cc----cc--ceeccCceEEEecCCCEEEEEEcCCCCcEEE
Confidence 5677778999998763333332457799999999872 11 00 1446666676666666555565446778888
Q ss_pred EEEcCC-CCceeeeecchhcCCCCCCHHHHHHHc
Q 048538 135 AALSSQ-NPGVITIANSVFGANPPINPDFLAKAF 167 (181)
Q Consensus 135 ~v~~~~-~~g~~~~~~s~~~~~~~~~~e~l~~~~ 167 (181)
.+--.+ +.-.+..++-|.+ +.|.+.+++
T Consensus 240 Ll~G~Pl~epi~~~gpFVmn-----t~eeI~qA~ 268 (290)
T 1j1l_A 240 LIAGEPLREPVIQHGPFVMN-----TNEEISQAI 268 (290)
T ss_dssp EEEECCCCSCCEEETTEEES-----SHHHHHHHH
T ss_pred EEEcccCCCCEEecCCeeeC-----CHHHHHHHH
Confidence 654433 2223333443333 455555554
No 175
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=91.45 E-value=0.42 Score=33.47 Aligned_cols=55 Identities=18% Similarity=0.126 Sum_probs=42.7
Q ss_pred EcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeC
Q 048538 63 YAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNI 126 (181)
Q Consensus 63 l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~ 126 (181)
+.||. .+......|+.-|++|++++.+.+. .....+++|+.+.+|++.--.++..
T Consensus 43 m~PGe---Y~F~T~~~E~MevvsG~l~V~LpG~------~eW~~~~aGesF~VpanssF~lkv~ 97 (106)
T 3eo6_A 43 LHPGV---YTLSSEVAETIRVLSGMAYYHAEGA------NDVQELHAGDSMVIPANQSYRLEVM 97 (106)
T ss_dssp ECSEE---EEECCSSCEEEEEEEEEEEEECTTC------SSCEEEETTCEEEECSSSCEEEEEE
T ss_pred EeeeE---EEecCCCcEEEEEEEeEEEEECCCC------ccCEEECCCCEEEECCCCcEEEEEC
Confidence 56663 3344457899999999999998533 2378999999999999998877653
No 176
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=90.76 E-value=1.6 Score=35.06 Aligned_cols=71 Identities=13% Similarity=-0.071 Sum_probs=48.5
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+.+..++++||.....-... ..-++||++|++++. +. ......|.+||.+++..+..-.+.+. ++++++
T Consensus 181 ~~~~~~~~L~~g~~~~~~~~~-~~~~l~v~~G~v~v~--g~-----~~~~~~l~~gd~~~l~~~~~l~l~a~--~~a~~L 250 (256)
T 2vec_A 181 QVWLHHIVLDKGESANFQLHG-PRAYLQSIHGKFHAL--TH-----HEEKAALTCGDGAFIRDEANITLVAD--SPLRAL 250 (256)
T ss_dssp SCEEEEEEECTTCEEEEECSS-SEEEEEEEESCEEEE--ET-----TEEEEEECTTCEEEEESCSEEEEEES--SSEEEE
T ss_pred CcEEEEEEECCCCEEEEecCC-CeEEEEEEECEEEEC--Cc-----cccceEECCCCEEEECCCCeEEEEeC--CCCEEE
Confidence 556777899999876443334 337899999998874 21 11246799999999987765556653 456665
Q ss_pred E
Q 048538 135 A 135 (181)
Q Consensus 135 ~ 135 (181)
.
T Consensus 251 L 251 (256)
T 2vec_A 251 L 251 (256)
T ss_dssp E
T ss_pred E
Confidence 4
No 177
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=90.45 E-value=0.31 Score=41.60 Aligned_cols=37 Identities=24% Similarity=0.245 Sum_probs=27.3
Q ss_pred eEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEc
Q 048538 102 LIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALS 138 (181)
Q Consensus 102 ~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~ 138 (181)
.-++.-.+||.|+||+|.+|+.+|..+.-.+..-+++
T Consensus 292 ~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~s 328 (392)
T 2ypd_A 292 TCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVS 328 (392)
T ss_dssp CEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECC
T ss_pred eEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcC
Confidence 4557789999999999999999998643333333434
No 178
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=89.83 E-value=0.29 Score=43.47 Aligned_cols=65 Identities=17% Similarity=0.183 Sum_probs=48.6
Q ss_pred EcCCCcCCCccCCCCc-EEEEEEeCeEEEEEEeccCC------------------C----CeeEeEEecCCcEEEEcCCC
Q 048538 63 YAPYGQNPPHTHPRAT-DILAVLEGTLYVGFVTSNEL------------------N----NTLIAKVLKKGDVFVFPIGL 119 (181)
Q Consensus 63 l~pg~~~~~H~H~~~~-E~~yVl~G~~~~~v~~~~~~------------------~----~~~~~~~l~~GD~i~ip~g~ 119 (181)
-+.|+...+|.-.++. -+.+|++|+=.+.+..+... + .......++|||.++||+|.
T Consensus 303 g~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW 382 (528)
T 3pur_A 303 GMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGW 382 (528)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTC
T ss_pred eCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCc
Confidence 4667778999876443 56789999988887754310 0 11245789999999999999
Q ss_pred eEEEEeCC
Q 048538 120 IHFQFNIG 127 (181)
Q Consensus 120 ~H~~~N~g 127 (181)
.|...|..
T Consensus 383 ~HaV~tle 390 (528)
T 3pur_A 383 IHAVLTPV 390 (528)
T ss_dssp EEEEEEEE
T ss_pred eEEEecCC
Confidence 99999974
No 179
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=89.50 E-value=0.5 Score=39.15 Aligned_cols=55 Identities=24% Similarity=0.295 Sum_probs=39.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCe
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLI 120 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~ 120 (181)
.+.+.++++.++.... .+. +..++.|++|++++... + ....|++||.+++|++..
T Consensus 250 ~F~~~~~~~~~~~~~~--~~~-~~~il~v~~G~~~l~~~------~--~~~~l~~G~~~~vpa~~~ 304 (319)
T 1qwr_A 250 YFSVYKWDINGEAEMA--QDE-SFLICSVIEGSGLLKYE------D--KTCPLKKGDHFILPAQMP 304 (319)
T ss_dssp SCEEEEEEEEEEEEEC--CCS-SCEEEEEEEEEEEEEET------T--EEEEEETTCEEEECTTCC
T ss_pred EEEEEEEEECCceEEc--cCC-ccEEEEEEcCeEEEEEC------C--EEEEEcCCcEEEEeCCCc
Confidence 4566677776543221 123 78899999999998642 1 257999999999999873
No 180
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=89.19 E-value=0.51 Score=40.34 Aligned_cols=54 Identities=19% Similarity=0.089 Sum_probs=39.8
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCC
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGL 119 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~ 119 (181)
.+.+.++++.++... ..+. +..++.|++|++++... + ....|++||+++||++.
T Consensus 323 ~F~v~~~~l~~~~~~--~~~~-~~~il~v~~G~~~l~~~------~--~~~~l~~G~~~fvpa~~ 376 (394)
T 2wfp_A 323 DFAFSLHDLALQETS--IGQH-SAAILFCVEGEAVLRKD------E--QRLVLKPGESAFIGADE 376 (394)
T ss_dssp SCEEEEEECCSSCEE--ECCS-SCEEEEEEEEEEEEEET------T--EEEEECTTCEEEECGGG
T ss_pred EEEEEEEEEcCCeEE--ecCC-CcEEEEEEeceEEEEEC------C--eEEEEccCcEEEEeCCC
Confidence 566777877755321 2345 67999999999987642 2 25899999999999985
No 181
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=87.98 E-value=0.36 Score=39.77 Aligned_cols=48 Identities=21% Similarity=0.209 Sum_probs=31.9
Q ss_pred CcEEEEEEeC-eEEEEEEeccC--------CCCe------eEeEEecCCcEEEEcCCCeEEEE
Q 048538 77 ATDILAVLEG-TLYVGFVTSNE--------LNNT------LIAKVLKKGDVFVFPIGLIHFQF 124 (181)
Q Consensus 77 ~~E~~yVl~G-~~~~~v~~~~~--------~~~~------~~~~~l~~GD~i~ip~g~~H~~~ 124 (181)
-.|++|+|+- ++.+++..... +.+. .....++|||.+++|+|++|.+-
T Consensus 117 KpE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 117 VESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CCEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEE
T ss_pred CcEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcC
Confidence 4799999996 34443321100 0111 34577999999999999999964
No 182
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=87.84 E-value=3.6 Score=33.40 Aligned_cols=72 Identities=6% Similarity=-0.124 Sum_probs=50.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEE-EEEEeCeEEEEEEeccCCCCeeEeEEe-c-C--------CcEEEEcCCCeEEE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDI-LAVLEGTLYVGFVTSNELNNTLIAKVL-K-K--------GDVFVFPIGLIHFQ 123 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~-~yVl~G~~~~~v~~~~~~~~~~~~~~l-~-~--------GD~i~ip~g~~H~~ 123 (181)
.+.+..++|++|.......-. .|+ ++.|.|++++.+++ . ++.+ . . .|.+|+|.|..-.+
T Consensus 28 y~~f~~~~L~~Ge~~~~~~~~--~E~~iv~l~G~~~V~~~g------~--~~~~~g~R~svF~~~~p~~lYvp~g~~v~i 97 (270)
T 2qjv_A 28 YVGFDVWQLXAGESITLPSDE--RERCLVLVAGLASVXAAD------S--FFYRIGQRMSPFERIPAYSVYLPHHTEAXV 97 (270)
T ss_dssp SCEEEEEEECTTCEEEECCSS--EEEEEEEEESCEEEEETT------E--EEEEECCCSSGGGCSCCCEEEECSSCCEEE
T ss_pred EeEEEEEEecCCCEEEecCCC--cEEEEEEecceEEEEECC------E--EEeccccccccccCCCCcEEEECCCCEEEE
Confidence 466888999999876655433 455 67889999998742 1 3544 2 2 49999999996667
Q ss_pred EeCCCCcEEEEEEEc
Q 048538 124 FNIGKTNAVAIAALS 138 (181)
Q Consensus 124 ~N~g~~~~~~l~v~~ 138 (181)
...+ ++++.....
T Consensus 98 ~a~~--~~~~~v~sA 110 (270)
T 2qjv_A 98 TAET--DLELAVCSA 110 (270)
T ss_dssp EESS--SEEEEEEEE
T ss_pred EecC--CceEEEEee
Confidence 7654 577765544
No 183
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=87.73 E-value=9.7 Score=32.06 Aligned_cols=94 Identities=15% Similarity=0.066 Sum_probs=56.0
Q ss_pred EEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCC
Q 048538 40 VKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGL 119 (181)
Q Consensus 40 ~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~ 119 (181)
+........|.+.+. ....+++.-+.... -.-..+..-+.|.+|++++.+..+ ++.....|+|+|+.++-+-+
T Consensus 320 Ye~AS~A~~phlPdl--~g~~l~Vd~~d~~~-DL~d~ge~hY~v~~G~lTL~W~~~----dGt~~a~L~PDgSAwv~PFV 392 (443)
T 3g7d_A 320 YEAASMASAAHLPDL--VGSFLRVDADGRGA-DLIDHAENHYVVTEGRLTLEWDGP----DGPASVELEPDGSAWTGPFV 392 (443)
T ss_dssp EEEEECCCCTTCTTC--EEEEEEEC-------CBCCSSEEEEEEEESCEEEEEEET----TEEEEEEECTTCEEEECTTC
T ss_pred eehhhhhccccCCCc--eeEEEEecCCCcch-hhhhcccceEEEecCceEEEecCC----CCccceEECCCCceeecccc
Confidence 444555556655433 33344444432221 111114445669999999999865 34467889999999999999
Q ss_pred eEEEEeCCCCcEEEEEEEcCCCCce
Q 048538 120 IHFQFNIGKTNAVAIAALSSQNPGV 144 (181)
Q Consensus 120 ~H~~~N~g~~~~~~l~v~~~~~~g~ 144 (181)
+|.|.-.| .++..-+...-|+
T Consensus 393 ~H~w~G~G----tVlkLgsG~hl~y 413 (443)
T 3g7d_A 393 RHRWHGTG----TVLKFGSGAHLGY 413 (443)
T ss_dssp CEEEESSE----EEEEEEECSTTCH
T ss_pred cccccCCc----eEEEeccCCcccc
Confidence 99998432 4444445555444
No 184
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=87.34 E-value=1.9 Score=34.99 Aligned_cols=72 Identities=13% Similarity=0.013 Sum_probs=48.8
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcC-C----CeEEEEeCCCC
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPI-G----LIHFQFNIGKT 129 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~-g----~~H~~~N~g~~ 129 (181)
.+.+..++++||+........+..-++||++|++++ + + + ...+.+||.+++.. + ..-.+.+. +
T Consensus 166 ~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v--~-g----~---~~~l~~~d~~~~~~~~~~~~~~l~l~a~--~ 233 (277)
T 2p17_A 166 PVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVF--G-A----D---NIEGKAGQALFFSRHNRGEETELNVTAR--E 233 (277)
T ss_dssp CEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEE--T-T----T---TEEEETTEEEEECCCCTTCEEEEEEEES--S
T ss_pred CCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEE--C-C----C---ceEeCCCcEEEEcCCCCCccceEEEEeC--C
Confidence 567777899999876443333245789999999876 2 1 1 25799999999986 6 44455563 4
Q ss_pred cEEEEEEEc
Q 048538 130 NAVAIAALS 138 (181)
Q Consensus 130 ~~~~l~v~~ 138 (181)
+++++.+--
T Consensus 234 ~a~~Ll~~G 242 (277)
T 2p17_A 234 KLRLLLYAG 242 (277)
T ss_dssp SEEEEEEEE
T ss_pred CcEEEEEec
Confidence 577775433
No 185
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=87.11 E-value=0.42 Score=39.60 Aligned_cols=49 Identities=16% Similarity=0.252 Sum_probs=32.0
Q ss_pred CCcEEEEEEeCe--EEEEEEeccC----------CCC---eeEeEEecCCcEEEEcCCCeEEEE
Q 048538 76 RATDILAVLEGT--LYVGFVTSNE----------LNN---TLIAKVLKKGDVFVFPIGLIHFQF 124 (181)
Q Consensus 76 ~~~E~~yVl~G~--~~~~v~~~~~----------~~~---~~~~~~l~~GD~i~ip~g~~H~~~ 124 (181)
+-.|++|+|+.. ..+.++.... +++ -.....++|||.+++|+|++|.+-
T Consensus 116 gKpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 116 GKTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp CCCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEEC
T ss_pred CCCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEec
Confidence 358999999952 3333332110 000 014688999999999999999963
No 186
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=86.93 E-value=1.2 Score=30.69 Aligned_cols=54 Identities=11% Similarity=0.155 Sum_probs=32.7
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeE---eEEecCCcEEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLI---AKVLKKGDVFV 114 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~---~~~l~~GD~i~ 114 (181)
+....+++|...-.---+ ...+++|++|.+.+.....+ |+... ...+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~--g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKENSK-ADNLMLLLEGGVELFYSNGG--AGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECTTSB-CCEEEEEEESCEEEECC-----------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeCCCC-CCcEEEEEeCEEEEEEECCC--CCceEeeeEEEecCCCEec
Confidence 345667888765332233 67899999999998754332 12223 45689999884
No 187
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=86.30 E-value=1.9 Score=29.77 Aligned_cols=53 Identities=11% Similarity=0.132 Sum_probs=35.8
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFV 114 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ 114 (181)
....+++|...-..--+ ...+++|++|.+.+.....+ |+......+.+||++-
T Consensus 29 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~--g~~~~~~~~~~g~~~G 81 (149)
T 2pqq_A 29 SEVTLARGDTLFHEGDP-GDRLYVVTEGKVKLHRTSPD--GRENMLAVVGPSELIG 81 (149)
T ss_dssp EEEEECTTCEEECTTSE-ECEEEEEEESCEEEEEECTT--SSEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCCC-CCeEEEEEecEEEEEEECCC--CcEEEEEEcCCcCEec
Confidence 45667888765332233 56789999999998775432 2444456799999873
No 188
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=86.17 E-value=2.4 Score=30.08 Aligned_cols=52 Identities=6% Similarity=-0.071 Sum_probs=34.9
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
+....+++|...-..--+ ...+++|++|.+.+....++ +......+.+||.+
T Consensus 61 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~g---~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVIDQGDD-GDNFYVIDRGTFDIYVKCDG---VGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEESEEEEEEEETT---EEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEeCCCC-CcEEEEEEeCEEEEEEcCCC---CeEEEEEcCCCCEe
Confidence 345677888765333233 67899999999999873321 33344568999976
No 189
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=86.08 E-value=4.3 Score=30.39 Aligned_cols=113 Identities=14% Similarity=0.049 Sum_probs=68.4
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEc
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALS 138 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~ 138 (181)
....+++|...-.--.+ ...+++|++|.+.+... .+ |+......+.+||++- ....+..... +++.++.+-.
T Consensus 24 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~-~~--G~~~~~~~~~~G~~fG--~~~~~~~~A~--~~~~v~~i~~ 95 (222)
T 1ft9_A 24 RSKIHAKGSLVCTGEGD-ENGVFVVVDGRLRVYLV-GE--EREISLFYLTSGDMFC--MHSGCLVEAT--ERTEVRFADI 95 (222)
T ss_dssp EEEEECTTCEEECTTCC-CCCEEEEEESEEEEEEE-ET--TEEEEEEEEETTCEEE--SCSSCEEEES--SCEEEEEECH
T ss_pred cEEEECCCCEEECCCCC-CCeEEEEEecEEEEEEC-CC--CCEEEEEEcCCCCEec--CCCCEEEEEc--cceEEEEEeH
Confidence 45667888765333234 67899999999998633 32 1333446799999987 3344455554 5566664422
Q ss_pred C-------CCCcee-----------------------------------eeecchhcC--------CCCCCHHHHHHHcC
Q 048538 139 S-------QNPGVI-----------------------------------TIANSVFGA--------NPPINPDFLAKAFQ 168 (181)
Q Consensus 139 ~-------~~~g~~-----------------------------------~~~~s~~~~--------~~~~~~e~l~~~~~ 168 (181)
. .+|... ..+. .++. .-+++.+.+|..+|
T Consensus 96 ~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~-~~~~~~~~~~~~~~~~t~~~lA~~lG 174 (222)
T 1ft9_A 96 RTFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHAN-TTGRQTQGGVIVSVDFTVEEIANLIG 174 (222)
T ss_dssp HHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCB-CCCSCC--CCCCEECCCHHHHHHHHC
T ss_pred HHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-HhCCCCCCcEEEeccCCHHHHHHHhC
Confidence 1 122211 0000 0000 01489999999999
Q ss_pred CCHHHHHHHHhc
Q 048538 169 LDVDVVKDLEAK 180 (181)
Q Consensus 169 v~~~~~~~~~~~ 180 (181)
++++.+-++.++
T Consensus 175 ~sr~tvsR~l~~ 186 (222)
T 1ft9_A 175 SSRQTTSTALNS 186 (222)
T ss_dssp SCHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 999998888775
No 190
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=85.36 E-value=11 Score=29.15 Aligned_cols=128 Identities=13% Similarity=0.083 Sum_probs=74.7
Q ss_pred cCCCeEEEEeecCCC----CC-----------CccCceEEEEEEEcCCC-cCCCccCCCCcEEEEEEeCeEEEEEEeccC
Q 048538 34 NRLGFSVKIANVEQI----PG-----------LNTLGISAVRIDYAPYG-QNPPHTHPRATDILAVLEGTLYVGFVTSNE 97 (181)
Q Consensus 34 ~~~g~~~~~~~~~~~----p~-----------l~~~~~~~~~v~l~pg~-~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~ 97 (181)
++=||++++.+.... +. -.....+..++-+.++. ...+|.-. ++|+.|-..|.....+..++
T Consensus 42 HPEGG~yrET~Rs~~~~~~~~~~~~~~~~~~~~~R~~~TaIYfLL~~~~~~S~wHRv~-sdEiW~~h~G~p~~~li~~d- 119 (203)
T 1xe7_A 42 HREGGYFKETDRSPYTMEVEKPVNGGSGNTEMVTRNQSTLIYYLLTPDSPIGKFHKNI-NRIIHILQRGKGQYVLVYPD- 119 (203)
T ss_dssp CTTSSEEEEEEECSCEEEECCCC--------CEEEESCEEEEEEEBTTBCEEEEEEES-SCEEEEEEEECEEEEEECTT-
T ss_pred CCCCceEEEEEecccccccCccccccccccCCCCccceeEEEEEEcCCCCcccceeeC-CCEEEEEEcCCccEEEEcCC-
Confidence 677888888776532 11 01112455666688886 57777766 99999999996555454432
Q ss_pred CCCeeEeEEecC----Cc--EEEEcCCCeEEEEeC-CCCc--EEEEEEEcCCC--CceeeeecchhcCCCCCCHH-HHHH
Q 048538 98 LNNTLIAKVLKK----GD--VFVFPIGLIHFQFNI-GKTN--AVAIAALSSQN--PGVITIANSVFGANPPINPD-FLAK 165 (181)
Q Consensus 98 ~~~~~~~~~l~~----GD--~i~ip~g~~H~~~N~-g~~~--~~~l~v~~~~~--~g~~~~~~s~~~~~~~~~~e-~l~~ 165 (181)
+...+..|.+ |+ -++||+|+....+.. ++.. -.++.....+. +..+++ .+++ .|.+
T Consensus 120 --g~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~~~~~tLVgCtVaPGFdF~dFel----------~~~~~~L~~ 187 (203)
T 1xe7_A 120 --GQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEFDNGFLISEVVVPGFDFEDHTF----------LKGEDELKH 187 (203)
T ss_dssp --SCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTTTTCEEEEEEESSCCCGGGEEE----------CCHHHHHHH
T ss_pred --CCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCCcccceEEEEEecCCccchhcEe----------cCCcHHHHH
Confidence 2334455554 44 478999999987654 3322 13444444443 233332 3445 5555
Q ss_pred HcCCCHHHHHHH
Q 048538 166 AFQLDVDVVKDL 177 (181)
Q Consensus 166 ~~~v~~~~~~~~ 177 (181)
.|- .+.++.|
T Consensus 188 ~~P--~~~~~~l 197 (203)
T 1xe7_A 188 LVG--PEKAAEL 197 (203)
T ss_dssp HHC--HHHHHHT
T ss_pred HCC--HHHHHHH
Confidence 553 5555554
No 191
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=85.16 E-value=5.4 Score=29.69 Aligned_cols=112 Identities=14% Similarity=0.121 Sum_probs=69.1
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEc
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALS 138 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~ 138 (181)
....+++|...-.--.+ ...+++|++|.+.+.. ..+ |+......+.+||++-. ......... +++.++.+-.
T Consensus 28 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~-~~~--G~~~~~~~~~~G~~~G~--~~~~~~~A~--~~~~v~~i~~ 99 (220)
T 2fmy_A 28 REQRYSKKAILYTPNTE-RNLVFLVKSGRVRVYL-AYE--DKEFTLAILEAGDIFCT--HTRAFIQAM--EDTTILYTDI 99 (220)
T ss_dssp EEEEECTTCEEECTTCS-SCEEEEEEESEEEEEE-ECS--SCEEEEEEEETTCEEES--CSSSEEEES--SSEEEEEEEH
T ss_pred heeEeCCCCEEECCCCC-CCeEEEEEecEEEEEE-CCC--CCEEEEEEcCCCCEeCC--ccceEEEEc--CcEEEEEEeH
Confidence 45668888765332233 6789999999999853 332 24444567999999866 233344554 5566665432
Q ss_pred C-------CCCcee-----------------------------------eeec----------chhcCCCCCCHHHHHHH
Q 048538 139 S-------QNPGVI-----------------------------------TIAN----------SVFGANPPINPDFLAKA 166 (181)
Q Consensus 139 ~-------~~~g~~-----------------------------------~~~~----------s~~~~~~~~~~e~l~~~ 166 (181)
. .+|... ..+. .+.. +++.+.+|..
T Consensus 100 ~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~~---~~t~~~lA~~ 176 (220)
T 2fmy_A 100 RNFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLEL---GLNTEEIALM 176 (220)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEEC---SSCHHHHHHH
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEec---cCCHHHHHHH
Confidence 1 122211 0000 0112 4899999999
Q ss_pred cCCCHHHHHHHHhcC
Q 048538 167 FQLDVDVVKDLEAKF 181 (181)
Q Consensus 167 ~~v~~~~~~~~~~~~ 181 (181)
+|++++.+-++.+++
T Consensus 177 lg~sr~tvsR~l~~l 191 (220)
T 2fmy_A 177 LGTTRQTVSVLLNDF 191 (220)
T ss_dssp HTSCHHHHHHHHHHH
T ss_pred hCCcHHHHHHHHHHH
Confidence 999999998887753
No 192
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=84.24 E-value=0.75 Score=39.31 Aligned_cols=22 Identities=14% Similarity=0.092 Sum_probs=19.4
Q ss_pred EeEEecCCcEEEEcCCCeEEEE
Q 048538 103 IAKVLKKGDVFVFPIGLIHFQF 124 (181)
Q Consensus 103 ~~~~l~~GD~i~ip~g~~H~~~ 124 (181)
....|+|||.+++|+|++|.+-
T Consensus 240 n~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 240 NVVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEE
T ss_pred eEEECCCCCEEEcCCCCceEcC
Confidence 3577999999999999999864
No 193
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=83.69 E-value=4.1 Score=29.71 Aligned_cols=114 Identities=8% Similarity=0.021 Sum_probs=47.1
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEE-Ec---CCCeE--EEEeCCCCcEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFV-FP---IGLIH--FQFNIGKTNAV 132 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~-ip---~g~~H--~~~N~g~~~~~ 132 (181)
....+++|...-.---+ ...+++|++|.+.+...+.+ |++.....+.+||++- +. .+.++ ..... +++.
T Consensus 31 ~~~~~~~g~~l~~~G~~-~~~~y~i~~G~v~~~~~~~~--G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a~--~~~~ 105 (194)
T 3dn7_A 31 QLKKVRKKETLLKTGEI-CRINYFVVKGCLRLFFIDEK--GIEQTTQFAIENWWLSDYMAFQKQQPADFYIQSV--ENCE 105 (194)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECTT--SCEEEEEEEETTCEECCHHHHHHTCBCSSEEEES--SCEE
T ss_pred EEEEEcCCCEEECCCCe-eeEEEEeecCeEEEEEECCC--CCEEEEEEccCCcEEeehHHHhcCCCCceEEEEE--CCEE
Confidence 34667888765332233 67899999999998875442 2444456699999985 21 23333 34443 5566
Q ss_pred EEEEEcC-------CCCcee----------------------------eee------cchhcCCCCCCHHHHHHHcCCCH
Q 048538 133 AIAALSS-------QNPGVI----------------------------TIA------NSVFGANPPINPDFLAKAFQLDV 171 (181)
Q Consensus 133 ~l~v~~~-------~~~g~~----------------------------~~~------~s~~~~~~~~~~e~l~~~~~v~~ 171 (181)
++.+-.. .+|... -++ ..+.. +++.+.+|..+|+++
T Consensus 106 v~~i~~~~~~~l~~~~p~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~~---~~t~~~iA~~lG~sr 182 (194)
T 3dn7_A 106 LLSITYTEQENLFERIPALERYFRLVYQKSFAAAQLRSKFQHMYSKEEQYHNFSSRFPEFIQ---RVPQYLLASYLGFTP 182 (194)
T ss_dssp EEEEEHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHHC------------------------------------
T ss_pred EEEEeHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHChHHHH---HCCHHHHHHHhCCCH
Confidence 6654321 122111 000 11122 488999999999999
Q ss_pred HHHHHHHhc
Q 048538 172 DVVKDLEAK 180 (181)
Q Consensus 172 ~~~~~~~~~ 180 (181)
+.+-++++|
T Consensus 183 etlsR~l~~ 191 (194)
T 3dn7_A 183 EYLSEIRKK 191 (194)
T ss_dssp ---------
T ss_pred HHHHHHHHh
Confidence 999988876
No 194
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=83.06 E-value=3.8 Score=30.32 Aligned_cols=117 Identities=13% Similarity=0.005 Sum_probs=69.1
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEc---CCC--eEEEEeCCCCcEEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFP---IGL--IHFQFNIGKTNAVA 133 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip---~g~--~H~~~N~g~~~~~~ 133 (181)
....+++|...-..-.+ ...+++|++|.+.+.....+ |+......+.+||++-.. .+. .+..... +++.+
T Consensus 23 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~--g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~--~~~~v 97 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGDL-GQALYLVASGKVRLFRTHLG--GQERTLALLGPGELFGEMSLLDEGERSASAVAV--EDTEL 97 (216)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECSS--SCEEEEEEECTTCEECHHHHHHCCBCSSEEEES--SSEEE
T ss_pred eEEEeCCCCEEEeCCCC-CCEEEEEEeCEEEEEEECCC--CCEEEEEEecCCCEEeehhhcCCCCcceEEEEc--CCEEE
Confidence 34667888765433233 67899999999999875432 244445779999988431 122 2334443 55666
Q ss_pred EEEEcC-------CCCceee----------------------------eecchh---c-C---CCCCCHHHHHHHcCCCH
Q 048538 134 IAALSS-------QNPGVIT----------------------------IANSVF---G-A---NPPINPDFLAKAFQLDV 171 (181)
Q Consensus 134 l~v~~~-------~~~g~~~----------------------------~~~s~~---~-~---~~~~~~e~l~~~~~v~~ 171 (181)
+.+-.. .+|.... ++.-+. . + ..+++.+.+|..+|+++
T Consensus 98 ~~i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr 177 (216)
T 4ev0_A 98 LALFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSR 177 (216)
T ss_dssp EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSCH
T ss_pred EEEcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCCH
Confidence 654321 1221110 000000 0 0 11489999999999999
Q ss_pred HHHHHHHhc
Q 048538 172 DVVKDLEAK 180 (181)
Q Consensus 172 ~~~~~~~~~ 180 (181)
+.+-++.++
T Consensus 178 ~tvsR~l~~ 186 (216)
T 4ev0_A 178 ETVSRVLHA 186 (216)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999888775
No 195
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=82.86 E-value=3.2 Score=30.85 Aligned_cols=117 Identities=12% Similarity=0.050 Sum_probs=69.1
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEE-----cCCCe--EEEEeCCCCcE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVF-----PIGLI--HFQFNIGKTNA 131 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~i-----p~g~~--H~~~N~g~~~~ 131 (181)
....+++|...-..-.+ ...+++|++|.+.+...+.+ |++.....+.+||++.+ -.+.+ +..... +++
T Consensus 27 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~--G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~--~~~ 101 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNMD-CTGLLLVKSGQLRTYILSDE--GREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAE--KDT 101 (220)
T ss_dssp EEEEECTTCEEEEGGGC-CCEEEEEEESCEEEEEECTT--SCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEES--SCE
T ss_pred ceEEeCCCCEEECCCCC-cceEEEEEeceEEEEEECCC--CCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEe--eee
Confidence 34667888765333334 67899999999999875443 24434466899999632 12333 334443 566
Q ss_pred EEEEEEcC-------CCCceee----------------------------ee------cchhcC-CCCCCHHHHHHHcCC
Q 048538 132 VAIAALSS-------QNPGVIT----------------------------IA------NSVFGA-NPPINPDFLAKAFQL 169 (181)
Q Consensus 132 ~~l~v~~~-------~~~g~~~----------------------------~~------~s~~~~-~~~~~~e~l~~~~~v 169 (181)
.++.+-.. .+|.... ++ ....+. .-+++.+.+|..+|+
T Consensus 102 ~~~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~ 181 (220)
T 3dv8_A 102 DLWIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGS 181 (220)
T ss_dssp EEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSSEECCCHHHHHHHHTC
T ss_pred EEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCceecCCHHHHHHHhCC
Confidence 66654321 1221110 00 001110 014899999999999
Q ss_pred CHHHHHHHHhc
Q 048538 170 DVDVVKDLEAK 180 (181)
Q Consensus 170 ~~~~~~~~~~~ 180 (181)
+++.+-++.++
T Consensus 182 sr~tvsR~l~~ 192 (220)
T 3dv8_A 182 HREVITRMLRY 192 (220)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999888775
No 196
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=82.86 E-value=4.5 Score=29.67 Aligned_cols=53 Identities=15% Similarity=0.235 Sum_probs=35.7
Q ss_pred EEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEE
Q 048538 60 RIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVF 115 (181)
Q Consensus 60 ~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~i 115 (181)
...+++|...-..--+ ...+++|++|.+.+.....+ |++.....+.+||++-.
T Consensus 15 ~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~--G~~~~~~~~~~g~~~G~ 67 (207)
T 2oz6_A 15 RRRYTAKSTIIYAGDR-CETLFFIIKGSVTILIEDDD--GREMIIGYLNSGDFFGE 67 (207)
T ss_dssp EEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECTT--SCEEEEEEEETTCEESC
T ss_pred eEEECCCCEEEcCCCC-CCeEEEEEeCEEEEEEECCC--CCEEEEEEcCCCCCccc
Confidence 4567888765332223 67899999999998875442 24444567999998843
No 197
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=82.58 E-value=4 Score=30.80 Aligned_cols=115 Identities=13% Similarity=0.157 Sum_probs=68.3
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcC---C--CeEEEEeCCCCcEEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPI---G--LIHFQFNIGKTNAVA 133 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~---g--~~H~~~N~g~~~~~~ 133 (181)
....+++|...-.--.+ ...+++|++|.+.+...+.+ |+......+.+||++-... + ........ +++.+
T Consensus 35 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~--G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~a~--~~~~v 109 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEEK-AQAIHVVIDGWVKLFRMTPT--GSEAVVSVFTRGESFGEAVALRNTPYPVSAEAV--TPCEV 109 (237)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESEEEEEEECTT--SCEEEEEEEETTEEECHHHHHHTCCCSSEEEES--SSEEE
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCC--CCEEEEEEeCCCCEechHHHhcCCCCCceEEEC--CceEE
Confidence 34667888765333233 67899999999999875442 2444456799999884321 2 22334443 45666
Q ss_pred EEEEcC-------CCCcee-----------------------------------eeec----c-hhcCCCCCCHHHHHHH
Q 048538 134 IAALSS-------QNPGVI-----------------------------------TIAN----S-VFGANPPINPDFLAKA 166 (181)
Q Consensus 134 l~v~~~-------~~~g~~-----------------------------------~~~~----s-~~~~~~~~~~e~l~~~ 166 (181)
+.+-.. .+|... ...+ . .+. -+++.+.+|..
T Consensus 110 ~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~~~~~~~~--l~~t~~~iA~~ 187 (237)
T 3fx3_A 110 MHIPSPVFVSLMRRDPEICISILATTFGHLHSLVAQLEQLKAQTGAQRVAEFLLELCDCDTGACEVT--LPYDKMLIAGR 187 (237)
T ss_dssp EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC-----EEE--CCSCTHHHHHH
T ss_pred EEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCCeEEE--ecCCHHHHHHH
Confidence 644221 122111 0000 0 111 13678999999
Q ss_pred cCCCHHHHHHHHhc
Q 048538 167 FQLDVDVVKDLEAK 180 (181)
Q Consensus 167 ~~v~~~~~~~~~~~ 180 (181)
+|++++.+-++.++
T Consensus 188 lg~sr~tvsR~l~~ 201 (237)
T 3fx3_A 188 LGMKPESLSRAFSR 201 (237)
T ss_dssp TTCCHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHH
Confidence 99999999888776
No 198
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=82.20 E-value=4.6 Score=30.33 Aligned_cols=54 Identities=11% Similarity=0.067 Sum_probs=37.3
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFV 114 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ 114 (181)
+....+++|...-..--+ ...+++|++|.+.+.....+ |+......+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~--g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 29 VTERNFQPDELVVEQDAE-GEALHLVTTGVVRVSRVSLG--GRERVLGDIYAPGVVG 82 (231)
T ss_dssp EEEEEECTTCBCCCTTCT-TTCEEEECSSEEEEEEECC----CEEEEEEEESSEEES
T ss_pred cEEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEEECCC--CceEEEEecCCCCEEe
Confidence 345678888876444344 67899999999998775432 2334456799999874
No 199
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=82.04 E-value=1.7 Score=30.26 Aligned_cols=53 Identities=13% Similarity=0.155 Sum_probs=33.8
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
+....+++|...-..-.+ ...+++|++|.+.+.....+ |+......+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~--g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPE--GQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEECCCC-------CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCCc-cceEEEEEeCEEEEEEECCC--CCEEEEEEccCCCee
Confidence 345668888765433334 67899999999998754321 132234679999987
No 200
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=81.96 E-value=3.1 Score=32.29 Aligned_cols=68 Identities=19% Similarity=0.142 Sum_probs=41.4
Q ss_pred EEEcCCCcCCCccCCCCc--EEEEEE----eCeEEEEEEeccC---------------CCCeeEeEEecCCcEEEEcCCC
Q 048538 61 IDYAPYGQNPPHTHPRAT--DILAVL----EGTLYVGFVTSNE---------------LNNTLIAKVLKKGDVFVFPIGL 119 (181)
Q Consensus 61 v~l~pg~~~~~H~H~~~~--E~~yVl----~G~~~~~v~~~~~---------------~~~~~~~~~l~~GD~i~ip~g~ 119 (181)
..+++|+...+|.|+++. -++|+- .|++.+. ++.. +.+.-....-++|+++++|+..
T Consensus 108 ~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~--~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l 185 (216)
T 2rg4_A 108 NILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLE--DPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWL 185 (216)
T ss_dssp EEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEE--CTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETTS
T ss_pred EEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEe--CCccccccccCcccccCcccCCCeeEecCCCCeEEEECCCC
Confidence 447889999999998432 123443 3445543 2210 0011113557899999999999
Q ss_pred eEEEEe-CCCCc
Q 048538 120 IHFQFN-IGKTN 130 (181)
Q Consensus 120 ~H~~~N-~g~~~ 130 (181)
+|.... .++++
T Consensus 186 ~H~V~p~~~~~~ 197 (216)
T 2rg4_A 186 RHEVPMNMAEED 197 (216)
T ss_dssp CEEECCCCSSSC
T ss_pred EEeccCCCCCCC
Confidence 999854 44444
No 201
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=81.90 E-value=3.9 Score=30.07 Aligned_cols=53 Identities=15% Similarity=0.075 Sum_probs=36.4
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
+....+++|...-.---+ ...+++|++|.+.+.....+ |+......+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~G~~-~~~ly~I~~G~v~v~~~~~~--g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGDP-GDYLLLILTGEVNVIKDIPN--KGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEEETT--TEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCCC-CCeEEEEEeCEEEEEEECCC--CCeEEEEEccCCCee
Confidence 345678888765433334 67899999999998876543 233345679999987
No 202
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=81.48 E-value=5.4 Score=29.31 Aligned_cols=114 Identities=14% Similarity=0.103 Sum_probs=68.8
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcC----C--CeEEEEeCCCCcEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPI----G--LIHFQFNIGKTNAV 132 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~----g--~~H~~~N~g~~~~~ 132 (181)
....+++|...-..--+ ...+++|++|.+.+...+.+ |++.....+.+||++-..+ + ........ +++.
T Consensus 20 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~--g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~ 94 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEE--GKEMILSYLNQGDFIGELGLFEEGQERSAWVRAK--TACE 94 (210)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECTT--CCEEEEEEEETTCEESCTTTTSTTCBCSSEEEES--SCEE
T ss_pred EEEEeCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCC--CCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEEC--CcEE
Confidence 34567888765333233 67899999999999875442 2433456689999984322 1 22334443 5566
Q ss_pred EEEEEcC-------CCCceee----------------------------e-------ec---------chhcCCCCCCHH
Q 048538 133 AIAALSS-------QNPGVIT----------------------------I-------AN---------SVFGANPPINPD 161 (181)
Q Consensus 133 ~l~v~~~-------~~~g~~~----------------------------~-------~~---------s~~~~~~~~~~e 161 (181)
++.+-.. .+|.... + +. .+.. +++.+
T Consensus 95 v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~---~~t~~ 171 (210)
T 3ryp_A 95 VAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQI---KITRQ 171 (210)
T ss_dssp EEEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTSTTCEEETTEEEE---ECCHH
T ss_pred EEEEcHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCcCCCCCceEe---ccCHH
Confidence 6654221 1222110 0 00 0111 48999
Q ss_pred HHHHHcCCCHHHHHHHHhc
Q 048538 162 FLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 162 ~l~~~~~v~~~~~~~~~~~ 180 (181)
.+|..+|++++.+-++.++
T Consensus 172 ~iA~~lg~sr~tvsR~l~~ 190 (210)
T 3ryp_A 172 EIGQIVGCSRETVGRILKM 190 (210)
T ss_dssp HHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHhCCcHHHHHHHHHH
Confidence 9999999999999888775
No 203
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=81.31 E-value=5.4 Score=29.77 Aligned_cols=73 Identities=12% Similarity=0.051 Sum_probs=45.0
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcC----CCeE--EEEeCCCCcEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPI----GLIH--FQFNIGKTNAV 132 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~----g~~H--~~~N~g~~~~~ 132 (181)
....+++|...-..--+ ...+++|++|.+.+...+.+ |++.....+.+||++-... +.++ ..... +++.
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~--G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~ 109 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGDP-AGTLYYVISGSVSIIAEEDD--DRELVLGYFGSGEFVGEMGLFIESDTREVILRTR--TQCE 109 (230)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTT--SCEEEEEEECTTCEESCGGGTSCCSBCCSEEEES--SCEE
T ss_pred eEEEeCCCCEEECCCCC-CCeEEEEEeeEEEEEEECCC--CCEEEEEEecCCCEEEehhhhcCCCCceeEEEEc--CcEE
Confidence 35667888765333233 67899999999998875442 2444456699999985322 2222 33443 5566
Q ss_pred EEEE
Q 048538 133 AIAA 136 (181)
Q Consensus 133 ~l~v 136 (181)
++.+
T Consensus 110 v~~i 113 (230)
T 3iwz_A 110 LAEI 113 (230)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6644
No 204
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=81.27 E-value=5.4 Score=29.82 Aligned_cols=114 Identities=12% Similarity=0.152 Sum_probs=68.2
Q ss_pred EEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEc---CC--CeEEEEeCCCCcEEEE
Q 048538 60 RIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFP---IG--LIHFQFNIGKTNAVAI 134 (181)
Q Consensus 60 ~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip---~g--~~H~~~N~g~~~~~~l 134 (181)
...+++|...-.---+ ...+++|++|.+.+.....+ |++.....+.+||++-.. .+ ..+..... +++.++
T Consensus 31 ~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~--g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~v~ 105 (227)
T 3d0s_A 31 PVDFPRGHTVFAEGEP-GDRLYIIISGKVKIGRRAPD--GRENLLTIMGPSDMFGELSIFDPGPRTSSATTI--TEVRAV 105 (227)
T ss_dssp EEEECTTCEEECTTCC-CCEEEEEEESCEEEEEECTT--SCEEEEEEECTTCEESCHHHHSCSCCSSEEEES--SCEEEE
T ss_pred EEEeCCCCEEEcCCCc-CCEEEEEEeeEEEEEEECCC--CcEEEEEEecCCCEEeeHHHcCCCCceeEEEEc--ccEEEE
Confidence 4667888765332233 67899999999998875432 244345679999987422 12 23344554 456665
Q ss_pred EEEc-------CCCCcee-----------------------------------eeec---------chhcCCCCCCHHHH
Q 048538 135 AALS-------SQNPGVI-----------------------------------TIAN---------SVFGANPPINPDFL 163 (181)
Q Consensus 135 ~v~~-------~~~~g~~-----------------------------------~~~~---------s~~~~~~~~~~e~l 163 (181)
.+-. ..+|... .++. ..+. -+++.+.+
T Consensus 106 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~--~~~t~~~l 183 (227)
T 3d0s_A 106 SMDRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVT--HDLTQEEI 183 (227)
T ss_dssp EEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHEEEETTEEEEE--CCCCHHHH
T ss_pred EEeHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCcCCCceEEc--CCCCHHHH
Confidence 4432 1222111 0000 0111 14899999
Q ss_pred HHHcCCCHHHHHHHHhc
Q 048538 164 AKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 164 ~~~~~v~~~~~~~~~~~ 180 (181)
|..+|++++.+-++.++
T Consensus 184 A~~lg~sr~tvsR~l~~ 200 (227)
T 3d0s_A 184 AQLVGASRETVNKALAD 200 (227)
T ss_dssp HHHHTSCHHHHHHHHHH
T ss_pred HHHhCCcHHHHHHHHHH
Confidence 99999999998888765
No 205
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=80.84 E-value=2.2 Score=34.98 Aligned_cols=54 Identities=15% Similarity=0.153 Sum_probs=38.4
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCc-EEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeE
Q 048538 55 GISAVRIDYAPYGQNPPHTHPRAT-DILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIH 121 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~~~H~H~~~~-E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H 121 (181)
.+.+.++++.+.... ... +. .++.|++| +++... + + ...+++||++++|++...
T Consensus 229 ~F~v~~~~~~~~~~~---~~~-~~~~il~v~~G-~~i~~~-~----~---~~~l~~G~~~~ipa~~~~ 283 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI---KTG-GVMNILYAAEG-YFILRG-K----E---TADLHRGYSCLVPASTDS 283 (300)
T ss_dssp SEEEEEEEEEEEEEE---ECC-SBCEEEEEEES-CEEEES-S----S---EEEECTTCEEEECTTCCE
T ss_pred eEEEEEEEECCceEE---ecC-CceEEEEEccc-EEEEeC-C----e---EEEEccceEEEEeCCCce
Confidence 466777777643222 233 77 89999999 888652 1 2 478999999999998843
No 206
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=80.56 E-value=4.1 Score=30.83 Aligned_cols=118 Identities=9% Similarity=-0.048 Sum_probs=69.5
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcC---C---CeEEEEeCCCCcE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPI---G---LIHFQFNIGKTNA 131 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~---g---~~H~~~N~g~~~~ 131 (181)
....++++|...-.--.+ ...+++|++|.+.+.....+ |++.....+.+||++-..+ + ..+..... +++
T Consensus 43 ~~~~~~~~ge~i~~~G~~-~~~~y~i~~G~v~~~~~~~~--G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~--~~~ 117 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGNP-CTQLCFLLKGEISIVTNAKE--NIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAH--TEV 117 (232)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECGG--GSCEEEEEEESSEEECGGGGSSSCCBCSSEEEES--SCE
T ss_pred cEEEEECCCCEEECCCCc-ccEEEEEEeeEEEEEEECCC--CCEEEEEEccCCCeeeehHHhCCCCCCceEEEEc--cce
Confidence 345678888765433334 67899999999998765432 2444456789999874321 2 23345554 456
Q ss_pred EEEEEEc-------CCCCcee-------------------e---------eecchh--cCC------CCCCHHHHHHHcC
Q 048538 132 VAIAALS-------SQNPGVI-------------------T---------IANSVF--GAN------PPINPDFLAKAFQ 168 (181)
Q Consensus 132 ~~l~v~~-------~~~~g~~-------------------~---------~~~s~~--~~~------~~~~~e~l~~~~~ 168 (181)
.++.+-. ..+|... . ++.-+. ... -+++.+.+|..+|
T Consensus 118 ~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~t~~~lA~~lG 197 (232)
T 1zyb_A 118 HTVCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLD 197 (232)
T ss_dssp EEEEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHT
T ss_pred EEEEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhhcCCeEEecCCHHHHHHHhC
Confidence 6654432 1122111 0 000000 000 1389999999999
Q ss_pred CCHHHHHHHHhc
Q 048538 169 LDVDVVKDLEAK 180 (181)
Q Consensus 169 v~~~~~~~~~~~ 180 (181)
++++.+-++.++
T Consensus 198 ~sr~tvsR~l~~ 209 (232)
T 1zyb_A 198 DTRLNISKTLNE 209 (232)
T ss_dssp SCHHHHHHHHHH
T ss_pred CChhHHHHHHHH
Confidence 999998888775
No 207
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=80.53 E-value=1.2 Score=38.54 Aligned_cols=22 Identities=18% Similarity=0.161 Sum_probs=19.1
Q ss_pred eEEecCCcEEEEcCCCeEEEEe
Q 048538 104 AKVLKKGDVFVFPIGLIHFQFN 125 (181)
Q Consensus 104 ~~~l~~GD~i~ip~g~~H~~~N 125 (181)
...|+|||.+++|+|++|.+-.
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred eEecCCCCEEecCCCCccccCC
Confidence 4669999999999999998644
No 208
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=80.47 E-value=4.3 Score=29.76 Aligned_cols=114 Identities=16% Similarity=0.071 Sum_probs=64.1
Q ss_pred EEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEE--cCCCeE--EEEeCCCCcEEEEEEE
Q 048538 62 DYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVF--PIGLIH--FQFNIGKTNAVAIAAL 137 (181)
Q Consensus 62 ~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~i--p~g~~H--~~~N~g~~~~~~l~v~ 137 (181)
++++|...-.--.+ ...+++|++|.+.+...+.+ |++.....+.+||++-. -.+.++ ..... +++.++.+
T Consensus 3 ~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~--g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~--~~~~v~~i- 76 (195)
T 3b02_A 3 RFARKETIYLRGEE-ARTLYRLEEGLVRVVELLPD--GRLITLRHVLPGDYFGEEALEGKAYRYTAEAM--TEAVVQGL- 76 (195)
T ss_dssp EECTTCEEECTTSB-CCCEEEEEESCEEEEEECTT--SCEEEEEEECTTCEECGGGGTCSBCSSEEEES--SSEEEEEE-
T ss_pred EcCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCC--CCEEEEEEecCCCEechhhhCCCCceeEEEEC--CcEEEEEE-
Confidence 35556543222223 56789999999998765432 24334567999998843 112222 33443 55666543
Q ss_pred cCCC--Ccee----------------------------eeecch------hcC-------CCCCCHHHHHHHcCCCHHHH
Q 048538 138 SSQN--PGVI----------------------------TIANSV------FGA-------NPPINPDFLAKAFQLDVDVV 174 (181)
Q Consensus 138 ~~~~--~g~~----------------------------~~~~s~------~~~-------~~~~~~e~l~~~~~v~~~~~ 174 (181)
+... |... -++.-+ ++. .-+++.+.+|..+|++++.+
T Consensus 77 ~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~tv 156 (195)
T 3b02_A 77 EPRAMDHEALHRVARNLARQMRRVQAYEAHLQTGELRARIARYLLFLADTPLSARDRQGIYVTVSHEEIADATASIRESV 156 (195)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHTTTSCHHHH
T ss_pred cHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCeeeccCCHHHHHHHhCCCHHHH
Confidence 3221 1100 000000 000 01389999999999999999
Q ss_pred HHHHhcC
Q 048538 175 KDLEAKF 181 (181)
Q Consensus 175 ~~~~~~~ 181 (181)
-++.+++
T Consensus 157 sR~l~~L 163 (195)
T 3b02_A 157 SKVLADL 163 (195)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887753
No 209
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=79.10 E-value=3.9 Score=30.76 Aligned_cols=118 Identities=13% Similarity=0.120 Sum_probs=67.6
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcC---C--CeEEEEeCCCCcEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPI---G--LIHFQFNIGKTNAV 132 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~---g--~~H~~~N~g~~~~~ 132 (181)
....++++|...-.--.+ ...+++|++|.+.+.....+ |++.....+.+||++-..+ + ..+..... +++.
T Consensus 33 ~~~~~~~~g~~i~~~g~~-~~~~y~v~~G~v~~~~~~~~--g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~ 107 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGDI-PNNLFYLYEGKIKILREGVY--GRFHISRIVKPGQFFGMRPYFAEETCSSTAIAV--ENSK 107 (232)
T ss_dssp CEEEEECTTCEEECTTCC-CCEEEEEEESCEEEEC-------CCCEEEEECTTCEESHHHHHHTSCCSSEEEES--SCEE
T ss_pred CeEEEECCCCEEEeCCCC-CCeEEEEEeCEEEEEEECCC--CCEEEEEEeCCCCEeeeehhhCCCCcceEEEEe--cceE
Confidence 345678888765333233 67889999999998754332 2444457799999873221 2 23344554 4566
Q ss_pred EEEEEcC-------CCCcee----------------------------eeecch------hc----C---CCCCCHHHHH
Q 048538 133 AIAALSS-------QNPGVI----------------------------TIANSV------FG----A---NPPINPDFLA 164 (181)
Q Consensus 133 ~l~v~~~-------~~~g~~----------------------------~~~~s~------~~----~---~~~~~~e~l~ 164 (181)
++.+-.. .+|... -++.-+ ++ + .-+++.+.+|
T Consensus 108 v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA 187 (232)
T 2gau_A 108 VLAIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLSIYLSREELA 187 (232)
T ss_dssp EEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCBCTTSSBBSCCCCHHHHH
T ss_pred EEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCcEEEcccCHHHHH
Confidence 6544221 122111 000000 10 0 1258999999
Q ss_pred HHcCCCHHHHHHHHhc
Q 048538 165 KAFQLDVDVVKDLEAK 180 (181)
Q Consensus 165 ~~~~v~~~~~~~~~~~ 180 (181)
..+|++++.+-++.++
T Consensus 188 ~~lg~sr~tvsR~l~~ 203 (232)
T 2gau_A 188 TLSNMTVSNAIRTLST 203 (232)
T ss_dssp HHTTSCHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHH
Confidence 9999999999888775
No 210
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=78.51 E-value=6.2 Score=30.08 Aligned_cols=115 Identities=16% Similarity=0.158 Sum_probs=69.3
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEc---CCCe----EEEEeCCCCcE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFP---IGLI----HFQFNIGKTNA 131 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip---~g~~----H~~~N~g~~~~ 131 (181)
....+++|...-.---+ ...+++|++|.+.+.....+ |++.....+.+||++-.. .+.+ ...... +++
T Consensus 44 ~~~~~~~ge~i~~~G~~-~~~ly~v~~G~v~~~~~~~~--G~~~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A~--~~~ 118 (243)
T 3la7_A 44 VVETFERNKTIFFPGDP-AERVYFLLKGAVKLSRVYEA--GEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAF--TPV 118 (243)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTT--CCEEEEEEECTTCEESCHHHHSSCCSBCCEEEEES--SSE
T ss_pred eeEEECCCCEEEcCCCC-CceEEEEEeCEEEEEEECCC--CCEEEEEEecCCCEEcchHHhCCCCCcceEEEEEc--cce
Confidence 35668888765433233 67899999999999875442 244445679999987432 1221 334443 556
Q ss_pred EEEEEEc-------CCCCcee-----------------------------------eeec--------c-hhcCCCCCCH
Q 048538 132 VAIAALS-------SQNPGVI-----------------------------------TIAN--------S-VFGANPPINP 160 (181)
Q Consensus 132 ~~l~v~~-------~~~~g~~-----------------------------------~~~~--------s-~~~~~~~~~~ 160 (181)
.++.+-. ..+|... .++. . .+. -+++.
T Consensus 119 ~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~L~~l~~~~g~~~~~~~~i~--~~lt~ 196 (243)
T 3la7_A 119 ELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADGITID--LKLSH 196 (243)
T ss_dssp EEEEEEHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHEEECSSSEEEC--SCCCH
T ss_pred EEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCeEEe--ccCCH
Confidence 6665422 1222211 0000 0 011 14899
Q ss_pred HHHHHHcCCCHHHHHHHHhc
Q 048538 161 DFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 161 e~l~~~~~v~~~~~~~~~~~ 180 (181)
+.+|..+|++++.+-++.++
T Consensus 197 ~~lA~~lG~sr~tvsR~l~~ 216 (243)
T 3la7_A 197 QAIAEAIGSTRVTVTRLLGD 216 (243)
T ss_dssp HHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHCCcHHHHHHHHHH
Confidence 99999999999999888775
No 211
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=78.07 E-value=5.2 Score=29.83 Aligned_cols=119 Identities=16% Similarity=0.162 Sum_probs=46.9
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEc----CC--CeEEEEeCCCCcE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFP----IG--LIHFQFNIGKTNA 131 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip----~g--~~H~~~N~g~~~~ 131 (181)
+....+++|...-..-.+ ...+++|++|.+.+.....+ |++.....+.+||++-.. .+ ..+..... +++
T Consensus 22 ~~~~~~~~g~~i~~~G~~-~~~~y~v~~G~v~~~~~~~~--G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~--~~~ 96 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQDDP-IEDVLILLEGTLKTEHVSEN--GKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAG--ENS 96 (213)
T ss_dssp SEEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECTT--SCEEEEEEECSSEESSGGGTTSSSCBCSSEEEES--SSE
T ss_pred cEEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCC--CCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEc--cce
Confidence 345668888765433334 67889999999998765432 244345679999987322 12 23344554 556
Q ss_pred EEEEEEcC-------CCCcee----------------------------eeecchh--c-----CCCCCCHHHHHHHcCC
Q 048538 132 VAIAALSS-------QNPGVI----------------------------TIANSVF--G-----ANPPINPDFLAKAFQL 169 (181)
Q Consensus 132 ~~l~v~~~-------~~~g~~----------------------------~~~~s~~--~-----~~~~~~~e~l~~~~~v 169 (181)
.++.+-.. .+|... -++.-+. . -.-+++.+.+|..+|+
T Consensus 97 ~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~g~~~~~~t~~~lA~~lg~ 176 (213)
T 1o5l_A 97 KILSIPKEVFLDLLMKDRELLLFFLKDVSEHFRVVSEKLFFLTTKTLREKLMNFLVRHMNEKRELTLPVTLEELSRLFGC 176 (213)
T ss_dssp EEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------------------------------
T ss_pred EEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhccCCcccCCCCHHHHHHHhCC
Confidence 66544221 122110 0000000 0 0114788999999999
Q ss_pred CHHHHHHHHhcC
Q 048538 170 DVDVVKDLEAKF 181 (181)
Q Consensus 170 ~~~~~~~~~~~~ 181 (181)
+++.+-++.+++
T Consensus 177 sr~tvsR~l~~L 188 (213)
T 1o5l_A 177 ARPALSRVFQEL 188 (213)
T ss_dssp ------------
T ss_pred CHHHHHHHHHHH
Confidence 999888877764
No 212
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=78.05 E-value=9 Score=31.34 Aligned_cols=70 Identities=9% Similarity=-0.011 Sum_probs=45.7
Q ss_pred EEEcCCCcCCCccCCCCcEEE-EEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEE-EEeCC-CCcEEEEEEE
Q 048538 61 IDYAPYGQNPPHTHPRATDIL-AVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHF-QFNIG-KTNAVAIAAL 137 (181)
Q Consensus 61 v~l~pg~~~~~H~H~~~~E~~-yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~-~~N~g-~~~~~~l~v~ 137 (181)
++|+.+......+-....|++ ..|.|.+++.+++ .++.|..-|.+|+|.|..-. +.... .+++++...-
T Consensus 62 l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~vdg--------~~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav~s 133 (289)
T 1ywk_A 62 LEIILDKELGVDYFLERRELGVINIGGPGFIEIDG--------AKETMKKQDGYYIGKETKHVRFSSENPDNPAKFYISC 133 (289)
T ss_dssp EECCCSGGGTSSSTTTTEEEEEEECSSCEEEEETT--------EEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEE
T ss_pred EEcCCCceecccccCCCcEEEEEEccCeEEEEECC--------EEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEc
Confidence 566766555444333467775 5678999998742 25799999999999997644 34322 3566665443
Q ss_pred c
Q 048538 138 S 138 (181)
Q Consensus 138 ~ 138 (181)
.
T Consensus 134 A 134 (289)
T 1ywk_A 134 V 134 (289)
T ss_dssp E
T ss_pred c
Confidence 3
No 213
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=78.01 E-value=7.1 Score=30.19 Aligned_cols=117 Identities=15% Similarity=0.115 Sum_probs=69.1
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcC----C--CeEEEEeCCCCcEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPI----G--LIHFQFNIGKTNAV 132 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~----g--~~H~~~N~g~~~~~ 132 (181)
....+++|...-.---+ ...+++|++|.+.+.....+ |++.....+.+||++-..+ . ........ +++.
T Consensus 70 ~~~~~~~ge~i~~~G~~-~~~~y~I~~G~v~~~~~~~~--G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~--~~~~ 144 (260)
T 3kcc_A 70 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEE--GKEMILSYLNQGDFIGELGLFEEGQERSAWVRAK--TACE 144 (260)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEECEEEEEEECTT--CCEEEEEEEETTCEESCTTTTSTTCBCCSEEEES--SCEE
T ss_pred EEEEECCCCEEECCCCc-CCeEEEEEeCEEEEEEECCC--CCEEEEEEcCCCCEEeehHHhCCCCCCceEEEEC--CCeE
Confidence 45668888765333233 67899999999999875442 2443456799999984332 1 22234443 5566
Q ss_pred EEEEEcC-------CCCceee----------------------------eecch------hcC-------CCCCCHHHHH
Q 048538 133 AIAALSS-------QNPGVIT----------------------------IANSV------FGA-------NPPINPDFLA 164 (181)
Q Consensus 133 ~l~v~~~-------~~~g~~~----------------------------~~~s~------~~~-------~~~~~~e~l~ 164 (181)
++.+-.. .+|.... ++.-+ ++. .-+++.+.+|
T Consensus 145 l~~i~~~~~~~l~~~~p~l~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~Ll~l~~~~~~~~~~~~~~l~lt~~~lA 224 (260)
T 3kcc_A 145 VAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLLVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIG 224 (260)
T ss_dssp EEEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTSTTCEEETTEEEEECCHHHHH
T ss_pred EEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCceeecCCHHHHH
Confidence 6644221 1222110 00000 000 0038899999
Q ss_pred HHcCCCHHHHHHHHhc
Q 048538 165 KAFQLDVDVVKDLEAK 180 (181)
Q Consensus 165 ~~~~v~~~~~~~~~~~ 180 (181)
..+|++++.+-++.++
T Consensus 225 ~~lG~sr~tvsR~l~~ 240 (260)
T 3kcc_A 225 QIVGCSRETVGRILKM 240 (260)
T ss_dssp HHHTCCHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHH
Confidence 9999999999888776
No 214
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=77.08 E-value=5.6 Score=29.23 Aligned_cols=113 Identities=17% Similarity=0.159 Sum_probs=67.0
Q ss_pred EEEEcCCCcCCCccCCCC--cEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEE----cCCCeEEEEeCCCCcEEE
Q 048538 60 RIDYAPYGQNPPHTHPRA--TDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVF----PIGLIHFQFNIGKTNAVA 133 (181)
Q Consensus 60 ~v~l~pg~~~~~H~H~~~--~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~i----p~g~~H~~~N~g~~~~~~ 133 (181)
...+++|...-..-.+ . ..+++|++|.+.+.....+ |++.....+.+||++-. .....+..... +++.+
T Consensus 7 ~~~~~~g~~i~~~g~~-~~~~~~y~v~~G~v~~~~~~~~--G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~--~~~~v 81 (202)
T 2zcw_A 7 TVSFKAGDVILYPGVP-GPRDRAYRVLEGLVRLEAVDEE--GNALTLRLVRPGGFFGEEALFGQERIYFAEAA--TDVRL 81 (202)
T ss_dssp CEEECTTCEEECSBSC-CTTCCCEEEEESCEEEEEECTT--SCEEEEEEECTTCEECTHHHHTCCBCSEEEES--SCEEE
T ss_pred EEEECCCCEEECCCCC-CCCCeEEEEEeCEEEEEEECCC--CcEEEEEEecCCCEeeehhcCCCCcceEEEEc--ccEEE
Confidence 3557777655333233 5 6789999999998765432 24444567999998743 11223344443 56666
Q ss_pred EEEEcCC-CCcee-----------------------------------eeec--------chhcCCCCCCHHHHHHHcCC
Q 048538 134 IAALSSQ-NPGVI-----------------------------------TIAN--------SVFGANPPINPDFLAKAFQL 169 (181)
Q Consensus 134 l~v~~~~-~~g~~-----------------------------------~~~~--------s~~~~~~~~~~e~l~~~~~v 169 (181)
+.+ ... .|... .+.. ..+. -+++.+.+|..+|+
T Consensus 82 ~~i-~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~--~~~t~~~lA~~lg~ 158 (202)
T 2zcw_A 82 EPL-PENPDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVV--LKATHDELAAAVGS 158 (202)
T ss_dssp EEC-CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTEEEETTEEE--EECCHHHHHHHHTC
T ss_pred EEE-hHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEc--cCCCHHHHHHHhCC
Confidence 665 321 11111 0000 0011 13899999999999
Q ss_pred CHHHHHHHHhc
Q 048538 170 DVDVVKDLEAK 180 (181)
Q Consensus 170 ~~~~~~~~~~~ 180 (181)
+++.+-++.++
T Consensus 159 sr~tvsR~l~~ 169 (202)
T 2zcw_A 159 VRETVTKVIGE 169 (202)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99998888765
No 215
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=76.80 E-value=7.5 Score=29.65 Aligned_cols=118 Identities=11% Similarity=0.093 Sum_probs=69.6
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEE--cCCCeEEEEeCCCCcEEEEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVF--PIGLIHFQFNIGKTNAVAIA 135 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~i--p~g~~H~~~N~g~~~~~~l~ 135 (181)
.....+++|...-.---+ ...+++|++|.+.+.....+ |++.....+.+||++-. .....+..... +++.++.
T Consensus 32 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~--G~~~~~~~~~~G~~~G~~l~~~~~~~~~A~--~~~~v~~ 106 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMPGEE-ITSMIFLVEGKIKLDIIFED--GSEKLLYYAGGNSLIGKLYPTGNNIYATAM--EPTRTCW 106 (250)
T ss_dssp SEEEEECTTCEEECTTCC-CCSEEEEEESCEEEEEECTT--SCEEEEEEECTTCEECCCSCCSCCEEEEES--SSEEEEE
T ss_pred CeEEEECCCCEEECCCCC-CCeEEEEEeeEEEEEEECCC--CCEEEEEEecCCCEEeeecCCCCceEEEEc--ccEEEEE
Confidence 345668888765333233 67899999999998876443 24434566999998843 11233344443 4566654
Q ss_pred EEcC-------CCCceee----------------------------eecch------hcC--------CCCCCHHHHHHH
Q 048538 136 ALSS-------QNPGVIT----------------------------IANSV------FGA--------NPPINPDFLAKA 166 (181)
Q Consensus 136 v~~~-------~~~g~~~----------------------------~~~s~------~~~--------~~~~~~e~l~~~ 166 (181)
+-.. .+|.... ++.-+ ++. ..+++.+.+|..
T Consensus 107 i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~iA~~ 186 (250)
T 3e6c_C 107 FSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEI 186 (250)
T ss_dssp ECHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCEEETTEEEEECCCCHHHHHHH
T ss_pred EcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCcEecCCCCHHHHHHH
Confidence 4221 1222110 00000 000 114899999999
Q ss_pred cCCCHHHHHHHHhc
Q 048538 167 FQLDVDVVKDLEAK 180 (181)
Q Consensus 167 ~~v~~~~~~~~~~~ 180 (181)
+|++++.+-++.++
T Consensus 187 lG~sr~tvsR~l~~ 200 (250)
T 3e6c_C 187 TGVHHVTVSRVLAS 200 (250)
T ss_dssp HTCCHHHHHHHHHH
T ss_pred hCCcHHHHHHHHHH
Confidence 99999999888775
No 216
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=76.11 E-value=8 Score=27.07 Aligned_cols=48 Identities=13% Similarity=0.164 Sum_probs=33.9
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
+....+++|...-.--.. ...+++|++|.+.+... ++ ....+.+||.+
T Consensus 61 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~------~~-~~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYVN------NE-WATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEESCEEEEET------TE-EEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEEC------CE-EEEEecCCCEe
Confidence 345678888765433334 67899999999998752 22 35679999987
No 217
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=75.88 E-value=7.3 Score=27.12 Aligned_cols=49 Identities=24% Similarity=0.211 Sum_probs=33.8
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVF 115 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~i 115 (181)
....+++|...-.---+ ...+++|++|.+.+... + .....+.+||++-.
T Consensus 51 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~------~-~~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 51 QTVHCAPGDLIYHAGES-VDSLCFVVSGSLEVIQD------D-EVVAILGKGDVFGD 99 (160)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESEEEEEET------T-EEEEEEETTCEEEC
T ss_pred eeeeeCCCCEEEeCCCC-ccEEEEEEeeEEEEEEC------C-EEEEEecCCCEeCc
Confidence 34667787765332233 67899999999998652 2 23577999998854
No 218
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=75.87 E-value=22 Score=26.71 Aligned_cols=72 Identities=11% Similarity=0.029 Sum_probs=43.6
Q ss_pred EEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcC---CC----eEEEEeCCCCcEE
Q 048538 60 RIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPI---GL----IHFQFNIGKTNAV 132 (181)
Q Consensus 60 ~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~---g~----~H~~~N~g~~~~~ 132 (181)
..++++|...-.---+ ...+++|++|.+.+...+.+ |++.....+ +||++-..+ +. .+...... +++.
T Consensus 20 ~~~~~~ge~i~~~G~~-~~~~y~I~~G~v~~~~~~~~--G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~ 94 (238)
T 2bgc_A 20 PKQFHKKELIFNQWDP-QEYCIFLYDGITKLTSISEN--GTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQAT 94 (238)
T ss_dssp CEEEETTCEEECTTCC-CCEEEEEEESEEEEEEECTT--SCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEE
T ss_pred EEEECCCCEEEeCCCC-CceEEEEEecEEEEEEECCC--CCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceE
Confidence 3557777765322223 67889999999998775442 233333456 999886543 22 35555554 5666
Q ss_pred EEEE
Q 048538 133 AIAA 136 (181)
Q Consensus 133 ~l~v 136 (181)
++.+
T Consensus 95 v~~i 98 (238)
T 2bgc_A 95 AYVI 98 (238)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 219
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=74.64 E-value=3.5 Score=30.58 Aligned_cols=47 Identities=15% Similarity=0.087 Sum_probs=32.3
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
....+.||...-..-.. ...+++|++|.+.+.. .+ ++ ...+.+||++
T Consensus 96 ~~~~~~~ge~I~~~g~~-~~~ly~I~~G~v~v~~--~~---g~--~~~l~~G~~f 142 (202)
T 3bpz_A 96 KFEVFQPGDYIIREGTI-GKKMYFIQHGVVSVLT--KG---NK--EMKLSDGSYF 142 (202)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEECEEEEEC--TT---SC--CEEEETTCEE
T ss_pred CceEECCCCEEEECCCc-CCeEEEEeccEEEEEE--CC---Ce--EEEEcCCCEe
Confidence 45668888765433334 6789999999999853 21 22 4579999987
No 220
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=73.82 E-value=10 Score=25.89 Aligned_cols=47 Identities=13% Similarity=0.151 Sum_probs=32.3
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
....+++|...-.--.. ...+++|++|.+.+.. + + .....+.+||++
T Consensus 47 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~--~----g-~~~~~~~~G~~f 93 (139)
T 3ocp_A 47 YPVEYGKDSCIIKEGDV-GSLVYVMEDGKVEVTK--E----G-VKLCTMGPGKVF 93 (139)
T ss_dssp EEEEECSSCEEECTTSC-CCEEEEEEECCEEEEE--T----T-EEEEEECTTCEE
T ss_pred EEEecCCCCEEEeCCCc-CCEEEEEEeCEEEEEE--C----C-EEEEEeCCCCEe
Confidence 44667887765333233 6789999999999843 2 2 245779999987
No 221
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=72.36 E-value=6.3 Score=28.98 Aligned_cols=49 Identities=16% Similarity=0.177 Sum_probs=33.9
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
+....+.||...-.--.. ...+++|++|.+.+.. .+ ++ ....+.+||++
T Consensus 94 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~~~~--~~---g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQEGTF-GDRMFFIQQGIVDIIM--SD---GV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECTTSC-CSEEEEEEECCEEEEC--TT---SC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEECCCc-CcEEEEEEeCEEEEEe--cC---Ce-EEEEecCCCEe
Confidence 345668888765333234 6789999999999865 21 22 45789999987
No 222
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=71.97 E-value=10 Score=31.94 Aligned_cols=53 Identities=6% Similarity=-0.090 Sum_probs=37.1
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFV 114 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ 114 (181)
+....+++|...-..-.. +..+++|++|.+.+....+ |+......+.+||++-
T Consensus 168 ~~~~~~~~Ge~I~~qGd~-~d~~YiI~sG~v~v~~~~~---G~~~~v~~l~~G~~fG 220 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGDD-GDNFYVIDRGTFDIYVKCD---GVGRCVGNYDNRGSFG 220 (416)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEECEEEEEEECS---SCEEEEEEEESCCEEC
T ss_pred cEEEEeCCCCEEEeCCCC-CceEEEEEeeEEEEEEecC---CCEEEEEEecCCCEEe
Confidence 445678888766444444 7889999999999887432 2444456799999774
No 223
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=68.33 E-value=11 Score=30.04 Aligned_cols=51 Identities=18% Similarity=0.131 Sum_probs=34.6
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
....+++|...-.--.+ ...+++|++|.+.+...+.+ ++.....+.+||++
T Consensus 37 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~---g~~~~~~~~~G~~f 87 (333)
T 4ava_A 37 QPLRAAAGQVLLRQGEP-AVSFLLISSGSAEVSHVGDD---GVAIIARALPGMIV 87 (333)
T ss_dssp EEEEECTTCEEECTTSB-CCCEEEEEECCEEEEEECTT---CCEEEEEECTTCEE
T ss_pred eEEEECCCCEEEeCCCc-CCEEEEEEeeEEEEEEECCC---CcEEEEEecCCCEe
Confidence 44667777654322233 67799999999999876443 22245679999987
No 224
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=67.76 E-value=6.1 Score=32.98 Aligned_cols=27 Identities=22% Similarity=0.336 Sum_probs=23.9
Q ss_pred eEeEEecCCcEEEEcCCCeEEEEeCCC
Q 048538 102 LIAKVLKKGDVFVFPIGLIHFQFNIGK 128 (181)
Q Consensus 102 ~~~~~l~~GD~i~ip~g~~H~~~N~g~ 128 (181)
..+..=+|||.|++.+|..|+..|.|-
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G~ 304 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATGW 304 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSS
T ss_pred eEEEEECCCCEEEECCCceEEEEecce
Confidence 346778999999999999999999985
No 225
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=66.58 E-value=6.6 Score=29.47 Aligned_cols=48 Identities=13% Similarity=-0.002 Sum_probs=33.5
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFV 114 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ 114 (181)
....+++|...-.--.+ +..+++|++|.+.+... + .. ...+.+||.+-
T Consensus 31 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~v~~~-~----~~--~~~~~~g~~fG 78 (246)
T 3of1_A 31 EEKSVPKGATIIKQGDQ-GDYFYVVEKGTVDFYVN-D----NK--VNSSGPGSSFG 78 (246)
T ss_dssp EEEEECTTCEEECTTCC-CCEEEEEEECCEEEEST-T----SC--CEEECTTCEEC
T ss_pred ceEEECCCCEEEecCCC-CCEEEEEEeeEEEEEEC-C----EE--EEecCCCCeee
Confidence 35667777765333344 78999999999998752 1 22 57899999884
No 226
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=65.94 E-value=10 Score=28.10 Aligned_cols=50 Identities=22% Similarity=0.082 Sum_probs=34.8
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVF 115 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~i 115 (181)
+....+.||...-.---. ...+++|++|.+.+... + .....+.+||++-.
T Consensus 98 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~~------~-~~~~~l~~G~~fGe 147 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQGDA-LQAIYFVCSGSMEVLKD------N-TVLAILGKGDLIGS 147 (212)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEESS------S-CEEEEECTTCEEEC
T ss_pred hheEEeCCCCEEEECCCc-ccEEEEEEecEEEEEEC------C-eEEEEecCCCCcCc
Confidence 345678888765333233 67899999999998642 1 23577999998843
No 227
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=65.56 E-value=5.4 Score=27.19 Aligned_cols=48 Identities=13% Similarity=0.108 Sum_probs=31.2
Q ss_pred EEEEEEc-CCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 58 AVRIDYA-PYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 58 ~~~v~l~-pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
+....++ +|...-.---. ...+++|++|.+.+.. .+ ++ ...+.+||++
T Consensus 39 ~~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~--~~---g~--~~~l~~G~~f 87 (134)
T 2d93_A 39 MIFEVVEQAGAIILEDGQE-LDSWYVILNGTVEISH--PD---GK--VENLFMGNSF 87 (134)
T ss_dssp EEEEEECSSSCEEECTTCE-ECEEEECCBSCEEEEC--SS---SC--EEEECTTCEE
T ss_pred heEEEecCCCCEEEeCCCC-CCeEEEEEeCEEEEEc--CC---Cc--EEEecCCCcc
Confidence 3456677 77654322223 5678999999999863 21 22 3679999977
No 228
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=65.03 E-value=4.8 Score=22.33 Aligned_cols=22 Identities=9% Similarity=0.215 Sum_probs=18.6
Q ss_pred CCHHHHHHHcCCCHHHHHHHHh
Q 048538 158 INPDFLAKAFQLDVDVVKDLEA 179 (181)
Q Consensus 158 ~~~e~l~~~~~v~~~~~~~~~~ 179 (181)
++++..+++||++++++.+++.
T Consensus 1 Lsd~dF~~vFgmsr~eF~~LP~ 22 (35)
T 1wy3_A 1 LSDEDFKAVFGMTRSAFANLPL 22 (35)
T ss_dssp CCHHHHHHHHSSCHHHHHHSCH
T ss_pred CCHHHHHHHHCCCHHHHHHCcH
Confidence 4678889999999999988763
No 229
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=64.93 E-value=7.8 Score=26.24 Aligned_cols=45 Identities=20% Similarity=0.170 Sum_probs=31.4
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
....+++|...-.--.. ...+++|++|.+.+... + ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~------~---~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGEP-GDRMFFVVEGSVSVATP------N---PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESCEEECSS------S---CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCCC-cceEEEEEeeEEEEEeC------C---cceECCCCEe
Confidence 45678888765433334 67899999999998532 2 3578899876
No 230
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=64.45 E-value=22 Score=29.90 Aligned_cols=75 Identities=17% Similarity=0.089 Sum_probs=52.7
Q ss_pred EeEEecC---------CcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCcee-----------------------ee---
Q 048538 103 IAKVLKK---------GDVFVFPIGLIHFQFNIGKTNAVAIAALSSQNPGVI-----------------------TI--- 147 (181)
Q Consensus 103 ~~~~l~~---------GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~~~g~~-----------------------~~--- 147 (181)
....+++ ||+.+.|+-.+|...-.+|.|++++......+-... ..
T Consensus 155 twr~l~~~~~~~~w~~gdsyveps~cphty~l~~d~parivsyt~~s~l~~l~~e~n~w~~~a~e~~l~~l~~~~aagv~ 234 (443)
T 3g7d_A 155 TWRVLHANHGGDRWITGDSYVEPSYCPHSYSLAGDAPARIVSYTAQSNISPLMTEANNWSTGAFEEALKALSGKVSAGSV 234 (443)
T ss_dssp TEEEECBCCSSCTTSCBCEEEECTTCCCEEEESSSSCEEEEEEECCCTTHHHHHHHTTSCHHHHHHHHHHHSSCCCHHHH
T ss_pred hheeeccCCCCCccccCCcccccccCCcccccccCCchheEeeccccchHHHHHhhcccccHHHHHHHHhhcccchHHHH
Confidence 3577898 999999999999999999999999975443321100 00
Q ss_pred ecchhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 048538 148 ANSVFGANPPINPDFLAKAFQLDVDVVKDLE 178 (181)
Q Consensus 148 ~~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~ 178 (181)
....+ .+..++.+-|++.-|++.+-+..+.
T Consensus 235 LR~ar-~ReglTQ~~LAe~TGIPq~hISeMe 264 (443)
T 3g7d_A 235 LDLFL-ARRAHTRTSAAEAAGVPPADLEAAL 264 (443)
T ss_dssp HHHHH-HHTTCCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHH-HhcCCCHHHHHHHhCCCHHHHHHHh
Confidence 01111 0123899999999999998876654
No 231
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=64.27 E-value=5.4 Score=22.39 Aligned_cols=22 Identities=9% Similarity=0.164 Sum_probs=19.5
Q ss_pred CCHHHHHHHcCCCHHHHHHHHh
Q 048538 158 INPDFLAKAFQLDVDVVKDLEA 179 (181)
Q Consensus 158 ~~~e~l~~~~~v~~~~~~~~~~ 179 (181)
++++..+++||+++++..++++
T Consensus 3 Lsd~dF~~vFgmsr~eF~~LP~ 24 (37)
T 1und_A 3 LSEQDFVSVFGITRGQFAALPG 24 (37)
T ss_dssp CCHHHHHHHHSSCHHHHHHSCH
T ss_pred CCHHHHHHHHCcCHHHHHHChH
Confidence 7889999999999999988763
No 232
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=63.66 E-value=3.5 Score=30.80 Aligned_cols=116 Identities=9% Similarity=0.119 Sum_probs=67.4
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcC---CCe---EEEEeCCCCcEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPI---GLI---HFQFNIGKTNAV 132 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~---g~~---H~~~N~g~~~~~ 132 (181)
....+++|...-..-.+ ...+++|++|.+.+...+.+ |+......+.+||++-... +.+ ...... +++.
T Consensus 33 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~--G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~ 107 (227)
T 3dkw_A 33 DLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPE--GQEKILEVTNERNTFAEAMMFMDTPNYVATAQAV--VPSQ 107 (227)
T ss_dssp EEEECCTTEEEECTTSB-CCEEEEEEESCEECCBCCGG--GCCBCCCEECTTEEESCTTTTTTCSBCSSCEEES--SCCE
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeCEEEEEEECCC--CCEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEc--CcEE
Confidence 34567777655333234 67899999999998764332 2333446689999885432 222 233443 4455
Q ss_pred EEEEEc-------CCCCceee----------------------------e-------ecc------hhcCCCCCCHHHHH
Q 048538 133 AIAALS-------SQNPGVIT----------------------------I-------ANS------VFGANPPINPDFLA 164 (181)
Q Consensus 133 ~l~v~~-------~~~~g~~~----------------------------~-------~~s------~~~~~~~~~~e~l~ 164 (181)
++.+-. ..+|.... + .+. .+ .-+++.+.+|
T Consensus 108 v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~--~~~~t~~~lA 185 (227)
T 3dkw_A 108 LFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLAAHAPGENCRV--EIPVAKQLVA 185 (227)
T ss_dssp EEEEESHHHHHHHSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSSCCCC--CCCSCTHHHH
T ss_pred EEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCCCeEE--EecCCHHHHH
Confidence 554322 12332110 0 010 01 1248899999
Q ss_pred HHcCCCHHHHHHHHhcC
Q 048538 165 KAFQLDVDVVKDLEAKF 181 (181)
Q Consensus 165 ~~~~v~~~~~~~~~~~~ 181 (181)
..+|++++.+-++.+++
T Consensus 186 ~~lg~sr~tvsR~l~~l 202 (227)
T 3dkw_A 186 GHLSIQPETFSRIMHRL 202 (227)
T ss_dssp HHTTSCHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHH
Confidence 99999999998887753
No 233
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=63.14 E-value=21 Score=27.57 Aligned_cols=54 Identities=17% Similarity=0.191 Sum_probs=35.5
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
+....+++|...-..-.+ ...+++|++|++.+.....++ ++......+.+||++
T Consensus 180 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~~-~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGEP-GDEFFIILEGSAAVLQRRSEN-EEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEECSTT-SCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCcc-CCEEEEEEeCEEEEEEecCCC-CccEEEEEeCCCCEe
Confidence 345667888765443344 678999999999987643320 012345679999988
No 234
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=62.37 E-value=17 Score=28.10 Aligned_cols=49 Identities=12% Similarity=0.120 Sum_probs=34.8
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFV 114 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ 114 (181)
+....+++|...-..-.. +..+++|++|.+.+... + .....+.+||.+=
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~------g-~~~~~l~~G~~fG 110 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYVN------N-EWATSVGEGGSFG 110 (291)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEEET------T-EEEEEECTTCEEC
T ss_pred ccEEEECCCCEEEeCCCC-CceEEEEeeeEEEEEEC------C-eEEEEcCCCCccc
Confidence 345678888765433334 67899999999998762 2 2367799999873
No 235
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=60.90 E-value=16 Score=27.19 Aligned_cols=48 Identities=17% Similarity=0.093 Sum_probs=32.9
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
....+++|...-.---. +..+++|++|++.+.... + .....+.+||++
T Consensus 149 ~~~~~~~g~~i~~~g~~-~~~~y~I~~G~v~v~~~~-----~-~~~~~l~~g~~f 196 (246)
T 3of1_A 149 DTKIYQPGETIIREGDQ-GENFYLIEYGAVDVSKKG-----Q-GVINKLKDHDYF 196 (246)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEECEEEEEETT-----T-EEEEEEETTCEE
T ss_pred heEEeCCCCEEEeCCCc-CCEEEEEEecEEEEEEcC-----C-ceEEEcCCCCcc
Confidence 44567787764333233 678999999999987542 2 245779999987
No 236
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=60.87 E-value=15 Score=28.19 Aligned_cols=51 Identities=8% Similarity=-0.152 Sum_probs=0.0
Q ss_pred EEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeE---EEEeCCCCcEEEEEEE
Q 048538 80 ILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIH---FQFNIGKTNAVAIAAL 137 (181)
Q Consensus 80 ~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H---~~~N~g~~~~~~l~v~ 137 (181)
++|+++|++.+.+ +......|.+||.+.+...... .+...+...+..+.+.
T Consensus 143 ~v~~l~G~~~v~~-------~~~~~~~L~~~d~l~~~~~~~~~~~~~~~~g~~~~~~i~l~ 196 (200)
T 1yll_A 143 LLFAQQDGVAISL-------QGQPRGQLAAHDCLCAEGLQGLQHWRLTAHEPAWVCAVELD 196 (200)
T ss_dssp EEEESSSCEEEEE-------TTEEEEEECTTCEEEEESCCSCEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEccCcEEEEc-------CCCceeecCCCCEEEEeCCCccceeEeccCCceEEEEEEEe
No 237
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=60.49 E-value=15 Score=28.73 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=34.6
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
....+++|...-.---. ...+++|++|++.+...... +|+......+.+||++
T Consensus 181 ~~~~~~~g~~I~~~G~~-~~~~yiI~~G~v~~~~~~~~-~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 181 EETHYENGEYIIRQGAR-GDTFFIISKGKVNVTREDSP-NEDPVFLRTLGKGDWF 233 (299)
T ss_dssp EEEEECTTCEEECTTCE-ECEEEEEEESEEEEEECCSS-SCCCEEEEEEETTCEE
T ss_pred cEEEECCCCEEEeCCCC-CCEEEEEEeeEEEEEEecCC-CCcceEEEEcCCCCEe
Confidence 44567777654332223 56889999999999875411 1233345679999988
No 238
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=58.90 E-value=2 Score=29.51 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=22.3
Q ss_pred CcEEEEEEeCeEEEEEEeccCCCCeeEeE--EecCCcEE
Q 048538 77 ATDILAVLEGTLYVGFVTSNELNNTLIAK--VLKKGDVF 113 (181)
Q Consensus 77 ~~E~~yVl~G~~~~~v~~~~~~~~~~~~~--~l~~GD~i 113 (181)
...+++|++|.+.+... .+ |+..... .+.+||.+
T Consensus 47 ~~~~y~i~~G~v~~~~~-~~--g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 47 VNEMLFIIRGRLESVTT-DG--GRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CSEEEEEEECCCEEECC-SS--CSSSSSCEEECCTTCBS
T ss_pred CCeEEEEEeeEEEEEEc-CC--CcceeeeeeeecCCCEe
Confidence 57889999999996532 21 1221123 78999976
No 239
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=58.89 E-value=18 Score=28.21 Aligned_cols=49 Identities=12% Similarity=0.104 Sum_probs=34.5
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFV 114 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ 114 (181)
+....+++|...-..-.. +..+++|++|.+.+... + .....+.+||++-
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~~------g-~~~~~~~~G~~fG 110 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGDV-GSLVYVMEDGKVEVTKE------G-VKLCTMGPGKVFG 110 (299)
T ss_dssp CEEEEECTTCEEECTTCB-CCCEEEEEESCEEEEET------T-EEEEEECTTCEES
T ss_pred cCeEEECCCCEEEcCCCc-CceEEEEEEEEEEEEEC------C-EEEEEeCCCCeee
Confidence 345678888765444344 77899999999998532 2 2457799999874
No 240
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=57.60 E-value=61 Score=24.72 Aligned_cols=103 Identities=14% Similarity=0.027 Sum_probs=63.1
Q ss_pred CCCC-CccCCCeEEEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCCCcEEEEEEeCe-EEEEEEeccCCCCeeEeE
Q 048538 28 EPKN-AANRLGFSVKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATDILAVLEGT-LYVGFVTSNELNNTLIAK 105 (181)
Q Consensus 28 ~~~~-~~~~~g~~~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~-~~~~v~~~~~~~~~~~~~ 105 (181)
|++. +|+-=||..+++....-....+....+..-++...+ +.-.-++-+-++.+|+|. +.+...+ . ...
T Consensus 18 d~~~~pWkNGgG~TrEI~~~P~~~~~~F~wRiSiA~V~~~g--~FS~FpG~dR~l~lL~G~gl~L~~~g-----~--~~~ 88 (193)
T 3esg_A 18 DYVRMPWKNGGGSTEEITRDAGTGLEGFGWRLSIADIGESG--GFSSFAGYQRVITVIQGAGMVLTVDG-----E--EQR 88 (193)
T ss_dssp GCEEEECTTSSEEEEEEEECCCBTTTBCSEEEEEEEECSSE--ECCCCTTCEEEEEEEESSCEEEEETT-----S--CCE
T ss_pred HCCcccccCCCeEEEEEEEcCCCcCCCceEEEEEEEEcCCC--CCCCCCCceEEEEEEcCCcEEEEeCC-----C--ccE
Confidence 4444 786667766666553111223334444444455422 223346577889999998 7776531 1 257
Q ss_pred EecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCC
Q 048538 106 VLKKGDVFVFPIGLIHFQFNIGKTNAVAIAALSSQ 140 (181)
Q Consensus 106 ~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v~~~~ 140 (181)
.|++++.+.|+.+..-..+..+ .+++-+-++...
T Consensus 89 ~L~~~~p~~F~G~~~v~a~L~~-G~v~DfNlM~rr 122 (193)
T 3esg_A 89 GLLPLQPFAFRGDSQVSCRLIT-GPIRDFNLIYSP 122 (193)
T ss_dssp EECBTCCEEEETTSCEEEEESS-SCEEEEEEEECT
T ss_pred ecCCCCCEEeCCCCeEEEEECC-CCEEEEEEEEcC
Confidence 7899999999999888777753 456666666543
No 241
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=56.89 E-value=12 Score=33.28 Aligned_cols=26 Identities=23% Similarity=0.381 Sum_probs=23.6
Q ss_pred EeEEecCCcEEEEcCCCeEEEEeCCC
Q 048538 103 IAKVLKKGDVFVFPIGLIHFQFNIGK 128 (181)
Q Consensus 103 ~~~~l~~GD~i~ip~g~~H~~~N~g~ 128 (181)
.++.=+|||.|++++|..|+..|.|-
T Consensus 338 yr~vQkpGd~Vi~~PgayH~v~n~G~ 363 (531)
T 3avr_A 338 YRFIQRPGDLVWINAGTVHWVQAIGW 363 (531)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSS
T ss_pred EEEEECCCCEEEECCCceEEEEecce
Confidence 45778999999999999999999985
No 242
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=54.64 E-value=20 Score=29.10 Aligned_cols=54 Identities=11% Similarity=-0.026 Sum_probs=37.4
Q ss_pred CcEEE-EEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEEE-EeC-CCCcEEEEEEEc
Q 048538 77 ATDIL-AVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHFQ-FNI-GKTNAVAIAALS 138 (181)
Q Consensus 77 ~~E~~-yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~~-~N~-g~~~~~~l~v~~ 138 (181)
..|++ ..|.|.+.+.+++ .++.|..-|.+|+|.|..... ... ...++++...-.
T Consensus 78 ~rE~~iV~l~G~~~V~vdG--------~~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~sA 134 (282)
T 1xru_A 78 RRELGVINIGGAGTITVDG--------QCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNCA 134 (282)
T ss_dssp TEEEEEEECSSCEEEEETT--------EEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEE
T ss_pred CcEEEEEEccCeEEEEECC--------EEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEcc
Confidence 66774 5778999998742 257999999999999996444 333 235666654433
No 243
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=53.98 E-value=40 Score=27.38 Aligned_cols=64 Identities=13% Similarity=0.029 Sum_probs=43.9
Q ss_pred ceEEEEEEEcCCCcC-CCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEE-------EEeC
Q 048538 55 GISAVRIDYAPYGQN-PPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHF-------QFNI 126 (181)
Q Consensus 55 ~~~~~~v~l~pg~~~-~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~-------~~N~ 126 (181)
+....++.+.||... ..-.|+ -.|=+|+|+|.. ..|+..+-|+|++|. -..
T Consensus 216 G~~TrLlr~~Pg~dt~~v~iHd-y~EEvY~LeG~~-------------------d~G~Y~~RPpg~~HGps~~~~ppf~- 274 (303)
T 2qdr_A 216 GGGVWLLAILPHFDNKYQMIQP-YNEEGYCLTGYC-------------------DVGDYRIVKDHYWYCPSFSTLPRHI- 274 (303)
T ss_dssp SCEEEEEEECSSEECCSEEEEC-SCEEEEEEEEEE-------------------EETTEEEETTEEEEECTTEEECCEE-
T ss_pred CCeEEEEEECCCCCCCCceeec-cceeEEEEeeec-------------------cCceeeEcCCCCccCccccCCCCcC-
Confidence 456778889999654 333588 667799999954 127888888888888 332
Q ss_pred CCCcEEEEEEEcC
Q 048538 127 GKTNAVAIAALSS 139 (181)
Q Consensus 127 g~~~~~~l~v~~~ 139 (181)
++..+.++.-.+.
T Consensus 275 Se~G~l~fvR~Dg 287 (303)
T 2qdr_A 275 TDDGGLFFVRVDR 287 (303)
T ss_dssp ESSCEEEEEEESS
T ss_pred cCCceEEEEEeCc
Confidence 3567777755543
No 244
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=53.87 E-value=14 Score=32.51 Aligned_cols=85 Identities=18% Similarity=0.174 Sum_probs=51.5
Q ss_pred EEEeecCCCCCCccCceEEEEEEEcCCCcCCCccCCC-CcEEEEEEeCeEEEEEEeccC---------------------
Q 048538 40 VKIANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPR-ATDILAVLEGTLYVGFVTSNE--------------------- 97 (181)
Q Consensus 40 ~~~~~~~~~p~l~~~~~~~~~v~l~pg~~~~~H~H~~-~~E~~yVl~G~~~~~v~~~~~--------------------- 97 (181)
+..+-....+|++...+++ --+|+..++|.=.+ -.-+-|-+-|.-...+.-+..
T Consensus 223 lLs~l~~~I~GVNtpqLYi----gm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~~k~~~d~l~~~~ 298 (510)
T 4ask_A 223 MLSHVGHTILGMNTVQLYM----KVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSW 298 (510)
T ss_dssp GGGGSSSCCTTTTSCEEEE----ECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTCCTTTSCB
T ss_pred hhhhCCCcCCCcChhheEE----ccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHHHHhCcchhhccc
Confidence 4445556678777654433 35788888886321 334445555532222222210
Q ss_pred ---------CCCeeEeEEecCCcEEEEcCCCeEEEEeCCC
Q 048538 98 ---------LNNTLIAKVLKKGDVFVFPIGLIHFQFNIGK 128 (181)
Q Consensus 98 ---------~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~ 128 (181)
+|=...+.+=+|||.+++++|..||..|.|-
T Consensus 299 ~pspe~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf 338 (510)
T 4ask_A 299 WPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGW 338 (510)
T ss_dssp CCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSS
T ss_pred cCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecCe
Confidence 0111345778999999999999999999885
No 245
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=53.45 E-value=26 Score=29.28 Aligned_cols=55 Identities=18% Similarity=0.075 Sum_probs=36.6
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCC--eeEeEEecCCcEEEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNN--TLIAKVLKKGDVFVF 115 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~--~~~~~~l~~GD~i~i 115 (181)
+....+++|...-.---. ...+++|++|.+.+.....+ |+ ......+.+||++-.
T Consensus 65 ~~~~~~~~g~~i~~~Gd~-~~~~y~i~~G~v~v~~~~~~--g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFRQGDI-GTNWYAVLAGSLDVKVSETS--SHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEEECSSS--CGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEeCCCC-CCcEEEEEeeEEEEEEecCC--CCCcceEEEEccCCCCcch
Confidence 345678888765332233 67899999999999875432 11 134567999998854
No 246
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=51.73 E-value=30 Score=32.42 Aligned_cols=56 Identities=18% Similarity=0.092 Sum_probs=37.3
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFV 114 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ 114 (181)
+....+++|...---=.. +..++.|++|++.+.+......++......+.+||.+-
T Consensus 65 m~ye~~~~Ge~IfrqGd~-gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sFG 120 (999)
T 4f7z_A 65 GYYENLEKGITLFRQGDI-GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG 120 (999)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEEC
T ss_pred eEEEEECCCCEEEcCCCc-CCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcchh
Confidence 455678888765433355 78999999999999885322111223346799999873
No 247
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=47.94 E-value=27 Score=29.20 Aligned_cols=46 Identities=17% Similarity=0.114 Sum_probs=33.0
Q ss_pred EEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEE
Q 048538 61 IDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVF 113 (181)
Q Consensus 61 v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i 113 (181)
..+++|...-..-.. +..+++|++|++.+... ++.....+.+||++
T Consensus 364 ~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~~------~~~~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGEE-GTSWYIILKGSVNVVIY------GKGVVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTSC-CCEEEEEEESEEEEEET------TTEEEEEEETTCEE
T ss_pred eEecCCCEEEeCCCc-CCeEEEEEEeEEEEEEc------CCeeEEEecCCCEE
Confidence 367888765433344 77899999999998753 12346789999977
No 248
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=47.51 E-value=41 Score=25.04 Aligned_cols=79 Identities=14% Similarity=0.087 Sum_probs=49.5
Q ss_pred EEEEEEcCC----CcCCCccCCCCcEEEEEEeCeEEEEEEeccC---CCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCc
Q 048538 58 AVRIDYAPY----GQNPPHTHPRATDILAVLEGTLYVGFVTSNE---LNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTN 130 (181)
Q Consensus 58 ~~~v~l~pg----~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~---~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~ 130 (181)
+.+++.+|. .....=.|+.+.|.+.-+.|...+.++...+ +-++...+.+.+|+.|.+.+|++|...-.-+++
T Consensus 54 i~ifr~~~r~~p~~v~~lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~ 133 (168)
T 1xsq_A 54 ISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRV 133 (168)
T ss_dssp EEEEEECBCCSSCEEEEEEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSSC
T ss_pred EEEEEecCCCCCceeeEEeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCCc
Confidence 334445554 2223446887889998899985544443321 002235688999999999999999854333455
Q ss_pred EEEEEE
Q 048538 131 AVAIAA 136 (181)
Q Consensus 131 ~~~l~v 136 (181)
..++.+
T Consensus 134 ~~F~vv 139 (168)
T 1xsq_A 134 TDFLTI 139 (168)
T ss_dssp EEEEEE
T ss_pred ceEEEE
Confidence 666633
No 249
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=46.42 E-value=49 Score=24.79 Aligned_cols=68 Identities=12% Similarity=0.071 Sum_probs=45.0
Q ss_pred CCCccCCCCcEEEEEEeCeEEEEEEeccC---CCCeeEeEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 048538 69 NPPHTHPRATDILAVLEGTLYVGFVTSNE---LNNTLIAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAIAA 136 (181)
Q Consensus 69 ~~~H~H~~~~E~~yVl~G~~~~~v~~~~~---~~~~~~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l~v 136 (181)
...=.|+.+.|.+.-+.|...+.++...+ +-++...+...+|+.|.+.+|++|...-.-+++..++++
T Consensus 71 ~~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~dF~vv 141 (175)
T 2bdr_A 71 RMLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEKRDDFLVV 141 (175)
T ss_dssp CEEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSSEEEEEEE
T ss_pred eEEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCCCceEEEE
Confidence 34456887889999999976444444431 002345789999999999999999653322345555543
No 250
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=43.83 E-value=28 Score=18.72 Aligned_cols=24 Identities=0% Similarity=-0.016 Sum_probs=21.2
Q ss_pred CCHHHHHHHcCCCHHHHHHHHhcC
Q 048538 158 INPDFLAKAFQLDVDVVKDLEAKF 181 (181)
Q Consensus 158 ~~~e~l~~~~~v~~~~~~~~~~~~ 181 (181)
++...+++.+++++..+.+..++|
T Consensus 22 ~s~~~IA~~lgis~~Tv~~~~~~~ 45 (51)
T 1tc3_C 22 VSLHEMSRKISRSRHCIRVYLKDP 45 (51)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHHCS
T ss_pred CCHHHHHHHHCcCHHHHHHHHhhH
Confidence 889999999999999999887654
No 251
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=42.26 E-value=24 Score=29.10 Aligned_cols=49 Identities=10% Similarity=0.054 Sum_probs=35.4
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEE
Q 048538 58 AVRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFV 114 (181)
Q Consensus 58 ~~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ 114 (181)
+....+++|...-..-.. +..+++|++|.+.+... ++ ....+.+||++-
T Consensus 153 ~~~~~~~~ge~I~~~Gd~-~~~~yiI~~G~v~v~~~------~~-~v~~l~~G~~fG 201 (381)
T 4din_B 153 MFPVTHIAGETVIQQGNE-GDNFYVVDQGEVDVYVN------GE-WVTNISEGGSFG 201 (381)
T ss_dssp CEEEECCTTCBSSCTTSB-CCEEEECSSSEEEEEET------TE-EEEEEESSCCBC
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEeeEEEEEEC------Ce-EeeeCCCCCEEE
Confidence 455778888876554445 78899999999998752 22 356799999873
No 252
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=41.42 E-value=37 Score=28.37 Aligned_cols=54 Identities=15% Similarity=0.089 Sum_probs=32.5
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccC----CCCeeEeEEecCCcEE
Q 048538 59 VRIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNE----LNNTLIAKVLKKGDVF 113 (181)
Q Consensus 59 ~~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~----~~~~~~~~~l~~GD~i 113 (181)
....+++|...-.--.. +..+++|++|++.+.....+. .|+......+.+||++
T Consensus 291 ~~~~~~~Ge~I~~eGd~-~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 291 GTKVYNDGEQIIAQGDL-ADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred eEEEECCCCEEEeCCCc-CCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 44567777754332234 778999999999987543210 0123345678999987
No 253
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A
Probab=38.98 E-value=18 Score=22.98 Aligned_cols=23 Identities=9% Similarity=0.268 Sum_probs=19.9
Q ss_pred CCCHHHHHHHcCCCHHHHHHHHh
Q 048538 157 PINPDFLAKAFQLDVDVVKDLEA 179 (181)
Q Consensus 157 ~~~~e~l~~~~~v~~~~~~~~~~ 179 (181)
.++++..++.||++++++.++++
T Consensus 33 yLsdedF~~vFgmsr~eF~~LP~ 55 (68)
T 1qzp_A 33 HLSAEDFSRVFAMSPEEFGKLAL 55 (68)
T ss_dssp GBCHHHHHHHSSSCHHHHHHSCH
T ss_pred hCCHHHHHHHHCcCHHHHHHChH
Confidence 37889999999999999988753
No 254
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=35.28 E-value=49 Score=25.84 Aligned_cols=27 Identities=11% Similarity=0.308 Sum_probs=22.3
Q ss_pred EeEEecCCcEEEEcCCCeEEE-EeCCCC
Q 048538 103 IAKVLKKGDVFVFPIGLIHFQ-FNIGKT 129 (181)
Q Consensus 103 ~~~~l~~GD~i~ip~g~~H~~-~N~g~~ 129 (181)
....+++||++++...++|.- .|.++.
T Consensus 228 v~~~~~aGd~~~f~~~~~H~s~~N~s~~ 255 (291)
T 2opw_A 228 VPTPVQRGALVLIHGEVVHKSKQNLSDR 255 (291)
T ss_dssp EEECBCTTCEEEEETTCEEEECCBCSSS
T ss_pred eecccCCCcEEEEcCCceecCCCCCCCC
Confidence 457799999999999999986 476654
No 255
>1yu8_X Villin; alpha helix, 3-10 helix, structural protein; 1.45A {Gallus gallus} SCOP: a.14.1.1 PDB: 1qqv_A 1yu5_X 2rjx_A 2rjy_A 1yu7_X 2rjv_A 2rjw_A 3nkj_A 3myc_A 3mya_A 3mye_X 1unc_A
Probab=34.52 E-value=19 Score=22.79 Aligned_cols=22 Identities=9% Similarity=0.217 Sum_probs=19.3
Q ss_pred CCCHHHHHHHcCCCHHHHHHHH
Q 048538 157 PINPDFLAKAFQLDVDVVKDLE 178 (181)
Q Consensus 157 ~~~~e~l~~~~~v~~~~~~~~~ 178 (181)
.++++..++.||++++++.+++
T Consensus 32 yLsdedF~~vFgms~~eF~~LP 53 (67)
T 1yu8_X 32 HLSDEDFKAVFGMTRSAFANLP 53 (67)
T ss_dssp GSCHHHHHHHHSSCHHHHHTSC
T ss_pred cCCHHHHHHHHCcCHHHHHHCh
Confidence 3788999999999999998775
No 256
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=34.35 E-value=54 Score=25.89 Aligned_cols=28 Identities=32% Similarity=0.305 Sum_probs=22.6
Q ss_pred EeEEecCCcEEEEcCCCeEEE-EeCCCCc
Q 048538 103 IAKVLKKGDVFVFPIGLIHFQ-FNIGKTN 130 (181)
Q Consensus 103 ~~~~l~~GD~i~ip~g~~H~~-~N~g~~~ 130 (181)
....+++||++++...++|.- .|.++.+
T Consensus 216 v~~~~~aGd~vlf~~~~~H~s~~N~s~~~ 244 (308)
T 2a1x_A 216 VHLVMEKGDTVFFHPLLIHGSGQNKTQGF 244 (308)
T ss_dssp EEECBCTTCEEEECTTCCEEECCBCSSSC
T ss_pred EEccCCCccEEEECCCccccCCCCCCCCc
Confidence 356789999999999999986 5766544
No 257
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=34.22 E-value=66 Score=26.33 Aligned_cols=50 Identities=22% Similarity=0.211 Sum_probs=32.6
Q ss_pred EEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCC-eeEeEEecCCcEE
Q 048538 61 IDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNN-TLIAKVLKKGDVF 113 (181)
Q Consensus 61 v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~-~~~~~~l~~GD~i 113 (181)
..+++|...-.--.. +..+++|++|++.+.....+ |+ ......+.+||++
T Consensus 274 ~~~~~ge~I~~eGd~-~~~~yiI~~G~v~v~~~~~~--~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQGEP-GDDFYIITEGTASVLQRRSP--NEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCTTSB-CCEEEEEEESCEEEECCSSS--SSCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeCCCc-CCEEEEEEeCEEEEEEecCC--CCceEEEEEeCCCCEe
Confidence 446666654333334 67899999999998764321 12 2235679999987
No 258
>2k6m_S Supervillin; SVHP, HP, headpiece, archvillin, actin capping, actin-binding, alternative splicing, calcium, cytoplasm, cytoskeleton, membrane; NMR {Homo sapiens} PDB: 2k6n_A
Probab=32.03 E-value=19 Score=22.88 Aligned_cols=22 Identities=14% Similarity=0.126 Sum_probs=19.1
Q ss_pred CCCHHHHHHHcCCCHHHHHHHH
Q 048538 157 PINPDFLAKAFQLDVDVVKDLE 178 (181)
Q Consensus 157 ~~~~e~l~~~~~v~~~~~~~~~ 178 (181)
.++++..++.||++++++.+++
T Consensus 32 yLsdedF~~vFgmsr~eF~~LP 53 (67)
T 2k6m_S 32 YLTDEDFEFALDMTRDEYNALP 53 (67)
T ss_dssp GSCHHHHHHHTSSCHHHHTTSC
T ss_pred hCCHHHHHHHHCcCHHHHHHCc
Confidence 3789999999999999988765
No 259
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=31.75 E-value=1.3e+02 Score=21.54 Aligned_cols=57 Identities=14% Similarity=0.044 Sum_probs=39.3
Q ss_pred CCCccCCCCcEEEEEEeCeEEEEEEeccC-----------------C-CCeeEeEEecCCcEEEEcCCCeEEEEe
Q 048538 69 NPPHTHPRATDILAVLEGTLYVGFVTSNE-----------------L-NNTLIAKVLKKGDVFVFPIGLIHFQFN 125 (181)
Q Consensus 69 ~~~H~H~~~~E~~yVl~G~~~~~v~~~~~-----------------~-~~~~~~~~l~~GD~i~ip~g~~H~~~N 125 (181)
..+=.|..-..+=|+++|+=.+.+..... . +.......+++|+++++-++.+|....
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~~ 134 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPCC 134 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCccccccc
Confidence 34456776678889999977766653110 0 112235779999999999999998744
No 260
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=29.76 E-value=69 Score=25.30 Aligned_cols=28 Identities=18% Similarity=0.269 Sum_probs=22.6
Q ss_pred EeEEecCCcEEEEcCCCeEEE-EeC--CCCc
Q 048538 103 IAKVLKKGDVFVFPIGLIHFQ-FNI--GKTN 130 (181)
Q Consensus 103 ~~~~l~~GD~i~ip~g~~H~~-~N~--g~~~ 130 (181)
....+++||++++...++|.- .|. ++..
T Consensus 220 v~~~~~aGd~v~f~~~l~H~s~~N~~ss~~~ 250 (313)
T 2fct_A 220 VPMQMKAGQFIIFWSTLMHASYPHSGESQEM 250 (313)
T ss_dssp EEECBCTTEEEEEETTSEEEECCBCSSSSSC
T ss_pred eEeeeCCceEEEEeCCceeeCCCCCCCCCCc
Confidence 356799999999999999986 577 5444
No 261
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=29.69 E-value=70 Score=28.93 Aligned_cols=48 Identities=17% Similarity=0.095 Sum_probs=33.4
Q ss_pred EEEEcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEE
Q 048538 60 RIDYAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFV 114 (181)
Q Consensus 60 ~v~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ 114 (181)
...+++|...-..--. ...+++|++|.+.+... + + .....+.+||++-
T Consensus 58 ~~~~~kGe~I~~eGd~-~~~lyiIlsG~V~v~~~-g----~-~il~~l~~Gd~fG 105 (694)
T 3cf6_E 58 ESHAKGGTVLFNQGEE-GTSWYIILKGSVNVVIY-G----K-GVVCTLHEGDDFG 105 (694)
T ss_dssp EEECSTTCEEECTTSB-CCEEEEEEESEEEEEET-T----T-EEEEEEETTCEEC
T ss_pred EEEECCCCEEECCCCc-CCeEEEEEEEEEEEEEe-C----C-EEEEEeCCCCEee
Confidence 3567888765333233 67899999999998753 1 2 3467899999773
No 262
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=29.11 E-value=52 Score=27.32 Aligned_cols=21 Identities=24% Similarity=0.384 Sum_probs=18.9
Q ss_pred eEEecCCcEEEEcCCCeEEEE
Q 048538 104 AKVLKKGDVFVFPIGLIHFQF 124 (181)
Q Consensus 104 ~~~l~~GD~i~ip~g~~H~~~ 124 (181)
...++|||++++...++|.-.
T Consensus 235 ewd~epGDav~F~~~tlHga~ 255 (344)
T 3nnf_A 235 EDEYNLGDAFFFNKYVLHQSV 255 (344)
T ss_dssp ECCBCTTCEEEEETTCEEEEC
T ss_pred cccCCCCcEEEEecceeecCC
Confidence 466899999999999999987
No 263
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=27.06 E-value=68 Score=29.96 Aligned_cols=67 Identities=13% Similarity=-0.006 Sum_probs=39.9
Q ss_pred EcCCCcCCCccCCCCcEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcC---CCeEEEEeCC-CCcEEEEEE
Q 048538 63 YAPYGQNPPHTHPRATDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPI---GLIHFQFNIG-KTNAVAIAA 136 (181)
Q Consensus 63 l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~---g~~H~~~N~g-~~~~~~l~v 136 (181)
.+.|...--.--. +..+++|++|++.+... ++.....|++||.+=.-+ +.++...-.- ..+|.++++
T Consensus 366 ~kaGtvI~rQGE~-gds~YIIlsG~V~V~~~------~~~~v~~L~~Gd~FGElALL~~~PR~aTV~a~~d~c~fl~i 436 (999)
T 4f7z_A 366 AKGGTVLFNQGEE-GTSWYIILKGSVNVVIY------GKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRV 436 (999)
T ss_dssp SSTTCEEECTTSB-CCEEEEEEESEEEEEET------TTEEEEEEETTCEECGGGGTCSCBCSSEEEESSSSEEEEEE
T ss_pred ccCCCEEEeCCCc-CCeEEEEEeeEEEEEEc------CCcceEEecCCCcccchhhccCCCeeEEEEEecCceEEEEe
Confidence 3445544333233 67888999999988643 233467899999984332 4555332211 235777755
No 264
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=25.23 E-value=82 Score=27.43 Aligned_cols=50 Identities=14% Similarity=0.113 Sum_probs=35.7
Q ss_pred EEEcCCCcCCCccCCCC-cEEEEEEeCeEEEEEEeccCCCCeeEeEEecCCcEEEEcCCCeEE
Q 048538 61 IDYAPYGQNPPHTHPRA-TDILAVLEGTLYVGFVTSNELNNTLIAKVLKKGDVFVFPIGLIHF 122 (181)
Q Consensus 61 v~l~pg~~~~~H~H~~~-~E~~yVl~G~~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~g~~H~ 122 (181)
....|+++.+|.+|.+. .|+.+.+.|...-. ..-+.||..-.-|.+++|-
T Consensus 348 w~v~e~TfrpPyyHrNv~SEfmgli~G~y~ak------------~~Gf~pGg~SLH~~~~pHG 398 (471)
T 1eyb_A 348 WGVADKTFRPPYYHRNCMSEFMGLIRGHYEAK------------QGGFLPGGGSLHSTMTPHG 398 (471)
T ss_dssp EECCSSSCCSCCCBCCSCEEEEEECCC--------------------CCTTCEEEECTTCCBC
T ss_pred cCCCCCccCCCCCccchhhhhhhhcccccccc------------ccCcCCCceeccCCCcCCC
Confidence 35678899999889753 38999999954321 1348999999999999996
No 265
>1ufm_A COP9 complex subunit 4; helix-turn-helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.4.5.47
Probab=24.99 E-value=39 Score=22.01 Aligned_cols=23 Identities=9% Similarity=0.198 Sum_probs=20.7
Q ss_pred CCHHHHHHHcCCCHHHHHHHHhc
Q 048538 158 INPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 158 ~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
++-+-|++.|+++.++++++..+
T Consensus 31 Isl~~La~ll~ls~~~vE~~ls~ 53 (84)
T 1ufm_A 31 ITFEELGALLEIPAAKAEKIASQ 53 (84)
T ss_dssp EEHHHHHHHTTSCHHHHHHHHHH
T ss_pred eeHHHHHHHHCcCHHHHHHHHHH
Confidence 78899999999999999998765
No 266
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=24.31 E-value=49 Score=21.63 Aligned_cols=25 Identities=16% Similarity=0.177 Sum_probs=21.6
Q ss_pred CCCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 156 PPINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 156 ~~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
.++.+..++...|++++++.+..++
T Consensus 33 ~PlkageIae~~GvdKKeVdKaik~ 57 (80)
T 2lnb_A 33 SPVKLAQLVKECQAPKRELNQVLYR 57 (80)
T ss_dssp SCEEHHHHHHHHTSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHHH
Confidence 4688999999999999999887654
No 267
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=24.08 E-value=74 Score=20.33 Aligned_cols=24 Identities=0% Similarity=0.153 Sum_probs=20.4
Q ss_pred CCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 157 PINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 157 ~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
..+-+.|++.|+|++..+++...+
T Consensus 16 ~vsv~eLa~~l~VS~~TIRrdL~~ 39 (78)
T 1xn7_A 16 RMEAAQISQTLNTPQPMINAMLQQ 39 (78)
T ss_dssp SBCHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCcHHHHHHHHCcCHHHHHHHHHH
Confidence 488899999999999999886543
No 268
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=23.75 E-value=14 Score=25.47 Aligned_cols=30 Identities=13% Similarity=0.096 Sum_probs=21.2
Q ss_pred EEEEeCe--EEEEEEeccCCCCeeEeEEecCCcEEEEcC
Q 048538 81 LAVLEGT--LYVGFVTSNELNNTLIAKVLKKGDVFVFPI 117 (181)
Q Consensus 81 ~yVl~G~--~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~ 117 (181)
.|++.|+ +.+.+++.. .+..++||.+++=+
T Consensus 33 TYvI~GeGSG~I~lNGAA-------Arl~~~GD~vII~a 64 (102)
T 3plx_B 33 TYTIATQEEGVVCLNGAA-------ARLAEVGDKVIIMS 64 (102)
T ss_dssp EECEEESSTTCEEEEGGG-------GGGCCTTCEEEEEE
T ss_pred EEEEEcCCCCEEEeCcHH-------HhccCCCCEEEEEE
Confidence 6888875 556665331 57789999998764
No 269
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=23.75 E-value=52 Score=20.05 Aligned_cols=24 Identities=17% Similarity=0.174 Sum_probs=20.6
Q ss_pred CCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 157 PINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 157 ~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
+++...|++.+++++..+.++.++
T Consensus 25 ~~s~~eLA~~lglsr~tv~~~l~~ 48 (67)
T 2heo_A 25 PVAIFQLVKKCQVPKKTLNQVLYR 48 (67)
T ss_dssp CEEHHHHHHHHCSCHHHHHHHHHH
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHH
Confidence 588999999999999998887653
No 270
>1ujs_A Actin-binding LIM protein homologue; VHP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 2l3x_A
Probab=22.56 E-value=22 Score=23.81 Aligned_cols=23 Identities=9% Similarity=0.236 Sum_probs=19.1
Q ss_pred CCCHHHHHHHcCCCHHHHHHHHh
Q 048538 157 PINPDFLAKAFQLDVDVVKDLEA 179 (181)
Q Consensus 157 ~~~~e~l~~~~~v~~~~~~~~~~ 179 (181)
.++++..++.|+++++++.+|++
T Consensus 47 YLSdedF~~vFgMsr~eF~~LP~ 69 (88)
T 1ujs_A 47 HLSQEEFYQVFGMTISEFDRLAL 69 (88)
T ss_dssp GSCTTHHHHHHSSCHHHHTTSCH
T ss_pred cCCHHHHHHHHCcCHHHHHHChH
Confidence 36788899999999999987753
No 271
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=22.11 E-value=15 Score=25.11 Aligned_cols=30 Identities=20% Similarity=0.187 Sum_probs=21.3
Q ss_pred EEEEeCe--EEEEEEeccCCCCeeEeEEecCCcEEEEcC
Q 048538 81 LAVLEGT--LYVGFVTSNELNNTLIAKVLKKGDVFVFPI 117 (181)
Q Consensus 81 ~yVl~G~--~~~~v~~~~~~~~~~~~~~l~~GD~i~ip~ 117 (181)
.|++.|+ +.+.+++.. .+..++||.+++=+
T Consensus 32 TYvI~GerSG~I~lNGAA-------Arl~~~GD~vII~a 63 (97)
T 1uhe_A 32 TYVILGKKRGEICVNGAA-------ARKVAIGDVVIILA 63 (97)
T ss_dssp EECEEECSTTCEEEEGGG-------GGGCCTTCEEEEEE
T ss_pred EEEEeeccCCeEEEchHH-------HccCCCCCEEEEEE
Confidence 6899885 556665331 57889999998753
No 272
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=20.87 E-value=65 Score=25.87 Aligned_cols=26 Identities=27% Similarity=0.216 Sum_probs=21.4
Q ss_pred eEEecCCcEEEEcCCCeEEE-EeCCCC
Q 048538 104 AKVLKKGDVFVFPIGLIHFQ-FNIGKT 129 (181)
Q Consensus 104 ~~~l~~GD~i~ip~g~~H~~-~N~g~~ 129 (181)
...+++||++++...++|.- .|.++.
T Consensus 231 ~~~~~aGdvl~f~~~~~H~s~~N~S~~ 257 (310)
T 3emr_A 231 VPTGKAGSVTLFESNTMHGSTSNITPY 257 (310)
T ss_dssp CCCBSTTCEEEEETTCCEEECCCCSSC
T ss_pred EeeeCCceEEEEeCCceecCCCCCCCC
Confidence 45699999999999999986 576654
No 273
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=20.58 E-value=99 Score=24.86 Aligned_cols=28 Identities=21% Similarity=0.252 Sum_probs=22.5
Q ss_pred eEEecCCcEEEEcCCCeEEE-EeC--CCCcE
Q 048538 104 AKVLKKGDVFVFPIGLIHFQ-FNI--GKTNA 131 (181)
Q Consensus 104 ~~~l~~GD~i~ip~g~~H~~-~N~--g~~~~ 131 (181)
...+++||++++...++|.- .|. ++..-
T Consensus 223 ~~~~~aGd~v~f~~~~~H~s~~N~~ts~~~R 253 (319)
T 3gja_A 223 PMVLKPGEAVIFWSNTMHASLPHTGSKTDYR 253 (319)
T ss_dssp BCCBCTTEEEEEETTSCEEECCCCSCTTCCE
T ss_pred EeeECCCeEEEEcCCccccCCCCCCCCCCcE
Confidence 45699999999999999986 577 55543
No 274
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=20.40 E-value=95 Score=19.91 Aligned_cols=24 Identities=4% Similarity=-0.047 Sum_probs=20.8
Q ss_pred CCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 157 PINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 157 ~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
.++...||+.+|+++..+++..++
T Consensus 27 ~~t~~eLA~~Lgvsr~tV~~~L~~ 50 (81)
T 1qbj_A 27 ATTAHDLSGKLGTPKKEINRVLYS 50 (81)
T ss_dssp CBCHHHHHHHHTCCHHHHHHHHHH
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHH
Confidence 589999999999999998876654
No 275
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=20.24 E-value=1.2e+02 Score=25.36 Aligned_cols=32 Identities=28% Similarity=0.113 Sum_probs=26.1
Q ss_pred EeEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 048538 103 IAKVLKKGDVFVFPIGLIHFQFNIGKTNAVAI 134 (181)
Q Consensus 103 ~~~~l~~GD~i~ip~g~~H~~~N~g~~~~~~l 134 (181)
.+..-+|||.|+.-++..|+..|.|-.-+.-+
T Consensus 262 ~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAv 293 (354)
T 3dxt_A 262 NRITQEAGEFMVTFPYGYHAGFNHGFNCAEAI 293 (354)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred EEEEeCCCcEEEECCCceEEEeeccccHhHhh
Confidence 45678999999999999999999986544444
No 276
>3lsg_A Two-component response regulator YESN; structural genomics, PSI-2, protein structure initiative, MCSG; 2.05A {Fusobacterium nucleatum}
Probab=20.19 E-value=99 Score=19.88 Aligned_cols=24 Identities=13% Similarity=0.151 Sum_probs=21.0
Q ss_pred CCCHHHHHHHcCCCHHHHHHHHhc
Q 048538 157 PINPDFLAKAFQLDVDVVKDLEAK 180 (181)
Q Consensus 157 ~~~~e~l~~~~~v~~~~~~~~~~~ 180 (181)
.++-+.+++.+++++..+.++.++
T Consensus 19 ~~~~~~lA~~~~~S~~~l~r~fk~ 42 (103)
T 3lsg_A 19 QFTLSVLSEKLDLSSGYLSIMFKK 42 (103)
T ss_dssp TCCHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHCcCHHHHHHHHHH
Confidence 589999999999999998887764
No 277
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.13 E-value=57 Score=21.56 Aligned_cols=28 Identities=18% Similarity=0.330 Sum_probs=24.0
Q ss_pred cchhcCCCCCCHHHHHHHcCCCHHHHHHHHh
Q 048538 149 NSVFGANPPINPDFLAKAFQLDVDVVKDLEA 179 (181)
Q Consensus 149 ~s~~~~~~~~~~e~l~~~~~v~~~~~~~~~~ 179 (181)
.++|.. ++.|+|..-|++++=+++||++
T Consensus 47 G~lL~~---L~ee~L~edf~ls~Lq~kKi~~ 74 (84)
T 2dkz_A 47 GNLLVQ---LTEEILSEDFKLSKLQVKKIMQ 74 (84)
T ss_dssp HHHHHH---CCHHHHHHTSCCCHHHHHHHHH
T ss_pred hHHHHh---CCHHHHHhhcCCCHHHHHHHHH
Confidence 456765 9999999999999999999875
Done!