BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048539
(119 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 83/122 (68%), Gaps = 13/122 (10%)
Query: 1 MASSSIATKGRYDVFLSFRGEDTGDNFTSHLFAALPNRG-----DEISLA--------LL 47
MASSS +++ YDVFLSFRGEDT FTSHL+ L ++G D+ L L
Sbjct: 1 MASSSSSSRWSYDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELC 60
Query: 48 NAIEASKISIVIFSKNYASSKWCLDELVKILECKNCNGQMVVPVFYHVHPSDVRNQTGSF 107
AIE S+ +IV+FS+NYA+S+WCL+ELVKI+ECK Q V+P+FY V PS VRNQ SF
Sbjct: 61 KAIEESQFAIVVFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESF 120
Query: 108 AK 109
AK
Sbjct: 121 AK 122
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 75/120 (62%), Gaps = 13/120 (10%)
Query: 1 MASSSIATKGRYDVFLSFRGEDTGDNFTSHLFAALPNRG------------DEISLALLN 48
MASSS + RYDVF SFRGED +NF SHL ++G I L
Sbjct: 1 MASSS-SNSWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRA 59
Query: 49 AIEASKISIVIFSKNYASSKWCLDELVKILECKNCNGQMVVPVFYHVHPSDVRNQTGSFA 108
AI SKIS+V+FS+NYASS WCLDEL++I++CK G V+PVFY V PSD+R QTG F
Sbjct: 60 AIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFG 119
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 79/121 (65%), Gaps = 11/121 (9%)
Query: 1 MASSSIATKGRYDVFLSFRGEDTGDNFTSHLFAALPNRG-----DEISLA------LLNA 49
M +S + RYDVF SFRGED D+F SHL L + DEI + LL+A
Sbjct: 1 MEIASSSGSRRYDVFPSFRGEDVRDSFLSHLLKELRGKAITFIDDEIERSRSIGPELLSA 60
Query: 50 IEASKISIVIFSKNYASSKWCLDELVKILECKNCNGQMVVPVFYHVHPSDVRNQTGSFAK 109
I+ S+I+IVIFSKNYASS WCL+ELV+I +C QMV+P+F+HV S+V+ QTG F K
Sbjct: 61 IKESRIAIVIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQTGEFGK 120
Query: 110 L 110
+
Sbjct: 121 V 121
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 16/134 (11%)
Query: 2 ASSSI-ATKGRYDVFLSFRGEDTGDNFTSHLFAALP--------NRGDEISLALLN---A 49
ASSS+ T VF++FRG+D + F S L A+ ++ + + L+N
Sbjct: 3 ASSSVRPTPTGPQVFINFRGKDLRNGFLSFLEPAMREANINVFIDKDEVVGTDLVNLFVR 62
Query: 50 IEASKISIVIFSKNYASSKWCLDELVKILECKNCNGQMVVPVFYHVHPSDVRNQTGSFAK 109
I+ S++++VIFSK+Y SS+WCLDEL +I +C N G +P+FY + PS V G F
Sbjct: 63 IQESRVAVVIFSKDYTSSEWCLDELAEIKDCINQGGLNAIPIFYKLAPSSVLELKGGFGD 122
Query: 110 ----LEKKLKMLPE 119
L++K K PE
Sbjct: 123 TFRVLKEKYKNDPE 136
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 13/107 (12%)
Query: 14 VFLSFRGEDTGDNFTSHLFAAL------------PNRGDEISLALLNAIEASKISIVIFS 61
VF++FRG+D F S L AL RG + ++L + I SKI++VIFS
Sbjct: 24 VFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEERGKYL-ISLFDTIGESKIALVIFS 82
Query: 62 KNYASSKWCLDELVKILECKNCNGQMVVPVFYHVHPSDVRNQTGSFA 108
+ Y S WC+DELVKI E + N +++P+FY + V++ TG F
Sbjct: 83 EGYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLDLDVVKDLTGKFG 129
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 15/127 (11%)
Query: 8 TKGRYDVFLSFRGEDTGDNFTSHLFAALPNR-----GDEISLA------LLNAIEASKIS 56
T +Y VF++FRG++ ++F L A+ DE+ L L IE S+++
Sbjct: 354 TLPQYQVFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVELRGTNLNYLFRRIEESRVA 413
Query: 57 IVIFSKNYASSKWCLDELVKILECKNCNGQMVVPVFYHVHPSDVRNQTGSFA----KLEK 112
+ IFS+ Y S WCLDELVK+ E +VVPVFY ++ + + G+F LE
Sbjct: 414 VAIFSERYTESCWCLDELVKMKEQMEQGKLVVVPVFYRLNATACKRFMGAFGDNLRNLEW 473
Query: 113 KLKMLPE 119
+ + PE
Sbjct: 474 EYRSEPE 480
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 1 MASSSIATKGRY---DVFLSFRGEDTGDNFTSHLFAALPNR------------GDEISLA 45
MASSS K VF+ FRG D +F S L AL G E++
Sbjct: 1 MASSSSVVKPTPTGPQVFICFRGADVRKHFISFLVPALREANINVFIDENEFLGSEMA-N 59
Query: 46 LLNAIEASKISIVIFSKNYASSKWCLDELVKILECKNCNGQMVVPVFYHVHPSDVRNQTG 105
LL IE S++++VIFS ++ S CL+EL KI E K+ +V+P+FY V PS V+ G
Sbjct: 60 LLTRIEESELALVIFSVDFTRSHRCLNELAKIKERKDQGRLIVIPIFYKVKPSAVKFLEG 119
Query: 106 SFA 108
F
Sbjct: 120 KFG 122
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 12/89 (13%)
Query: 21 EDTGDNFTSHLFAALPNRG---------DEISLALLNAIEASKISIVIFSKNYASSKWCL 71
E+ +F SHL AL +G D +S + +E +++S++I N S L
Sbjct: 14 EEVRYSFVSHLSKALQRKGVNDVFIDSDDSLSNESQSMVERARVSVMILPGNRTVS---L 70
Query: 72 DELVKILECKNCNGQMVVPVFYHVHPSDV 100
D+LVK+L+C+ Q+VVPV Y V S+
Sbjct: 71 DKLVKVLDCQKNKDQVVVPVLYGVRSSET 99
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 12 YDVFLSF-RGEDTGDNFTSHLFAALPNRGDEI--SLALLNAIEASKISIVIFSKNYASSK 68
YDV + + R + + ++F SHL A+L RG + ++A+ ++ I++ + Y S
Sbjct: 668 YDVVIRYGRADISNEDFISHLRASLCRRGISVYEKFNEVDALPKCRVLIIVLTSTYVPSN 727
Query: 69 WCLDELVKILECKNCNGQMVVPVFYHVHPSD 99
L+ ILE ++ ++V P+FY + P D
Sbjct: 728 -----LLNILEHQHTEDRVVYPIFYRLSPYD 753
>sp|Q9FH83|WRK52_ARATH Probable WRKY transcription factor 52 OS=Arabidopsis thaliana
GN=WRKY52 PE=2 SV=3
Length = 1288
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 21 EDTGDNFTSHLFAALPNRGDEISLALLNA-----------IEASKISIVIFSKNYASSKW 69
E+ +F SHL AL +G + ++ IE + +S+++ N S+
Sbjct: 17 EEVRYSFVSHLSEALRRKGINNVVVDVDIDDLLFKESQAKIEKAGVSVMVLPGNCDPSEV 76
Query: 70 CLDELVKILEC-KNCNGQMVVPVFY 93
LD+ K+LEC +N Q VV V Y
Sbjct: 77 WLDKFAKVLECQRNNKDQAVVSVLY 101
>sp|O73755|GREM1_CHICK Gremlin-1 OS=Gallus gallus GN=GREM1 PE=2 SV=1
Length = 184
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 38 RGDEISLALLNAIEASKISIVIFSKNYASSKWCLDE-LVKILECKNCNGQMVVPVFYHVH 96
RG S+ +E+S+ ++ I + Y WC + L + + + CN + ++ F +
Sbjct: 62 RGKGTSMPAEEVLESSQEALHITERKYLKRDWCKTQPLKQTIHEEGCNSRTIINRFCYGQ 121
Query: 97 ------PSDVRNQTGSF 107
P VR + GSF
Sbjct: 122 CNSFYIPRHVRKEEGSF 138
>sp|Q899S1|MNMG_CLOTE tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Clostridium tetani (strain Massachusetts / E88)
GN=mnmG PE=3 SV=1
Length = 623
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 9 KGRYDVFLSFRGEDTGDNFTSHLFAALPNRGDEISLALLNAIEASKISIVIFSKNYASSK 68
K ++ VF+ GE T + + S L ++LP +EI +A+ + + ++ YA
Sbjct: 290 KNKHQVFIEPEGEYTNEMYVSGLSSSLP---EEIQVAMYRTVPGLE-NVEFLRTAYAIEY 345
Query: 69 WCLD--ELVKILECKNCNG 85
C+D EL LE KN G
Sbjct: 346 DCIDPQELKLSLESKNIEG 364
>sp|O74757|HRD1_SCHPO ERAD-associated E3 ubiquitin-protein ligase hrd1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=hrd1 PE=1 SV=1
Length = 677
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 14 VFLSFRGEDTGDNFTSHLFAALPNRGDEISLALLN-AIEASKISIVIFSKNYASSKW 69
++L F E GD T LF E S+ LLN IEASK+ I ++ + W
Sbjct: 156 IYLCFTSEHLGDKSTRMLFVC------EFSVLLLNLTIEASKLCIYLYEARHLDQVW 206
>sp|Q0GC71|TLR2_CAPHI Toll-like receptor 2 OS=Capra hircus GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 12 YDVFLSFRGEDTG----------DNFTSHLFAALPNR----GDEISLALLNAIEASKISI 57
YD F+S+ +D+ ++F L R G I ++++IE S+ +I
Sbjct: 641 YDAFVSYSEQDSYWVENLMVQELEHFNPPFKLCLHKRDFVPGKWIIDNIIDSIEKSRKTI 700
Query: 58 VIFSKNYASSKWCLDEL 74
+ S+N+ S+WC EL
Sbjct: 701 FVLSENFVRSEWCKYEL 717
>sp|B2LT62|TLR2_CAPIB Toll-like receptor 2 OS=Capra ibex GN=TLR2 PE=3 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 12 YDVFLSFRGEDTG----------DNFTSHLFAALPNR----GDEISLALLNAIEASKISI 57
YD F+S+ +D+ ++F L R G I ++++IE S+ +I
Sbjct: 641 YDAFVSYSEQDSYWVENLMVQELEHFNPPFKLCLHKRDFVPGKWIIDNIIDSIEKSRKTI 700
Query: 58 VIFSKNYASSKWCLDEL 74
+ S+N+ S+WC EL
Sbjct: 701 FVLSENFVRSEWCKYEL 717
>sp|Q9SY66|FRS11_ARATH Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis thaliana GN=FRS11
PE=2 SV=1
Length = 680
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 51 EASKISIVIFSKNYASSKWCLDELVKILECKNCNGQMVVPVFYHVHPSDVRNQTGSFAKL 110
+A K I++FSK S + +++++LE + C V P F DVRN SF KL
Sbjct: 171 DADKSRILMFSKTGIS----VQQMMRLLELEKC----VEPGFLPFTEKDVRNLLQSFKKL 222
Query: 111 E 111
+
Sbjct: 223 D 223
>sp|Q689D1|TLR2_CANFA Toll-like receptor 2 OS=Canis familiaris GN=TLR2 PE=2 SV=1
Length = 785
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 12 YDVFLSFRGEDTG----------DNFTSHLFAALPNR----GDEISLALLNAIEASKISI 57
YD F+S+ D+ ++F L R G I ++++IE S+ +I
Sbjct: 642 YDAFVSYSEHDSYWVENLLVQKLEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSRKTI 701
Query: 58 VIFSKNYASSKWCLDEL 74
+ S+N+ S+WC EL
Sbjct: 702 FVLSENFVKSEWCKYEL 718
>sp|Q97CW3|MNMG_CLOAB tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792
/ JCM 1419 / LMG 5710 / VKM B-1787) GN=mnmG PE=3 SV=1
Length = 626
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 9 KGRYDVFLSFRGEDTGDNFTSHLFAALPNRGDEISLALLNAIEASKISIVIFSKNYASSK 68
K ++ +F+ GE+T D + + ++LP +E+ + +L + + + I YA
Sbjct: 291 KQQHQIFIEPEGENTNDLYVGGMSSSLP---EEVQIKMLKTVPGLE-DVEILKTAYAIEY 346
Query: 69 WCLD--ELVKILECKNCNG 85
C+D +L LE K+ G
Sbjct: 347 DCIDPTQLKLSLEFKDVKG 365
>sp|B3Y618|TLR2_MACMU Toll-like receptor 2 OS=Macaca mulatta GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 14/77 (18%)
Query: 12 YDVFLSFRGEDTG----------DNFTSHLFAALPNR----GDEISLALLNAIEASKISI 57
YD F+S+ D +NF L R G I ++++IE S ++
Sbjct: 641 YDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTV 700
Query: 58 VIFSKNYASSKWCLDEL 74
+ S+N+ S+WC EL
Sbjct: 701 FVLSENFVKSEWCKYEL 717
>sp|Q2PZH4|TLR2_BUBBU Toll-like receptor 2 OS=Bubalus bubalis GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 12 YDVFLSFRGEDTG----------DNFTSHLFAALPNR----GDEISLALLNAIEASKISI 57
YD F+S+ +D+ ++F L R G I ++++IE S +I
Sbjct: 641 YDAFVSYSEQDSYWVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTI 700
Query: 58 VIFSKNYASSKWCLDEL 74
+ S+N+ S+WC EL
Sbjct: 701 FVLSENFVKSEWCKYEL 717
>sp|Q95M53|TLR2_MACFA Toll-like receptor 2 OS=Macaca fascicularis GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 14/77 (18%)
Query: 12 YDVFLSFRGEDTG----------DNFTSHLFAALPNR----GDEISLALLNAIEASKISI 57
YD F+S+ D +NF L R G I ++++IE S ++
Sbjct: 641 YDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTV 700
Query: 58 VIFSKNYASSKWCLDEL 74
+ S+N+ S+WC EL
Sbjct: 701 FVLSENFVKSEWCKYEL 717
>sp|O60603|TLR2_HUMAN Toll-like receptor 2 OS=Homo sapiens GN=TLR2 PE=1 SV=1
Length = 784
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 14/77 (18%)
Query: 12 YDVFLSFRGEDTG----------DNFTSHLFAALPNR----GDEISLALLNAIEASKISI 57
YD F+S+ D +NF L R G I ++++IE S ++
Sbjct: 641 YDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTV 700
Query: 58 VIFSKNYASSKWCLDEL 74
+ S+N+ S+WC EL
Sbjct: 701 FVLSENFVKSEWCKYEL 717
>sp|B3Y615|TLR2_GORGO Toll-like receptor 2 OS=Gorilla gorilla gorilla GN=TLR2 PE=2 SV=1
Length = 784
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 14/77 (18%)
Query: 12 YDVFLSFRGEDTG----------DNFTSHLFAALPNR----GDEISLALLNAIEASKISI 57
YD F+S+ D +NF L R G I ++++IE S ++
Sbjct: 641 YDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTV 700
Query: 58 VIFSKNYASSKWCLDEL 74
+ S+N+ S+WC EL
Sbjct: 701 FVLSENFVKSEWCKYEL 717
>sp|B3Y613|TLR2_PANTR Toll-like receptor 2 OS=Pan troglodytes GN=TLR2 PE=2 SV=1
Length = 784
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 14/77 (18%)
Query: 12 YDVFLSFRGEDTG----------DNFTSHLFAALPNR----GDEISLALLNAIEASKISI 57
YD F+S+ D +NF L R G I ++++IE S ++
Sbjct: 641 YDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTV 700
Query: 58 VIFSKNYASSKWCLDEL 74
+ S+N+ S+WC EL
Sbjct: 701 FVLSENFVKSEWCKYEL 717
>sp|B3Y614|TLR2_PANPA Toll-like receptor 2 OS=Pan paniscus GN=TLR2 PE=2 SV=1
Length = 784
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 14/77 (18%)
Query: 12 YDVFLSFRGEDTG----------DNFTSHLFAALPNR----GDEISLALLNAIEASKISI 57
YD F+S+ D +NF L R G I ++++IE S ++
Sbjct: 641 YDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTV 700
Query: 58 VIFSKNYASSKWCLDEL 74
+ S+N+ S+WC EL
Sbjct: 701 FVLSENFVKSEWCKYEL 717
>sp|Q0SPQ4|MNMG_CLOPS tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Clostridium perfringens (strain SM101 / Type A)
GN=mnmG PE=3 SV=1
Length = 630
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 9 KGRYDVFLSFRGEDTGDNFTSHLFAALPNRGDEISLALLNAIEASKISIVIFSKNYASSK 68
K R+ +F+ G+DT + + + ++LP +++ + ++ + + + I YA
Sbjct: 290 KDRHQIFIEPEGDDTEEMYVGGMSSSLP---EDVQVQMIKTVPGLE-NAEIMRTAYAIEY 345
Query: 69 WCLD--ELVKILECKNCNG 85
C+D +L LE KN +G
Sbjct: 346 DCIDPTQLKASLEFKNIDG 364
>sp|Q0TLZ5|MNMG_CLOP1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=mnmG PE=3 SV=1
Length = 630
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 9 KGRYDVFLSFRGEDTGDNFTSHLFAALPNRGDEISLALLNAIEASKISIVIFSKNYASSK 68
K R+ +F+ G+DT + + + ++LP +++ + ++ + + + I YA
Sbjct: 290 KDRHQIFIEPEGDDTEEMYVGGMSSSLP---EDVQVQMIKTVPGLE-NAEIMRTAYAIEY 345
Query: 69 WCLD--ELVKILECKNCNG 85
C+D +L LE KN +G
Sbjct: 346 DCIDPTQLKASLEFKNIDG 364
>sp|Q8XH31|MNMG_CLOPE tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Clostridium perfringens (strain 13 / Type A) GN=mnmG
PE=3 SV=1
Length = 630
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 9 KGRYDVFLSFRGEDTGDNFTSHLFAALPNRGDEISLALLNAIEASKISIVIFSKNYASSK 68
K R+ +F+ G+DT + + + ++LP +++ + ++ + + + I YA
Sbjct: 290 KDRHQIFIEPEGDDTEEMYVGGMSSSLP---EDVQVQMIKTVPGLE-NAEIMRTAYAIEY 345
Query: 69 WCLD--ELVKILECKNCNG 85
C+D +L LE KN +G
Sbjct: 346 DCIDPTQLKASLEFKNIDG 364
>sp|Q6T752|TLR2_HORSE Toll-like receptor 2 OS=Equus caballus GN=TLR2 PE=2 SV=1
Length = 784
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 14/77 (18%)
Query: 12 YDVFLSFRGEDTG----------DNFTSHLFAALPNR----GDEISLALLNAIEASKISI 57
YD F+S+ D+ ++F L R G I ++++IE S +I
Sbjct: 641 YDAFVSYSERDSYWVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTI 700
Query: 58 VIFSKNYASSKWCLDEL 74
+ S+N+ S+WC EL
Sbjct: 701 FVLSENFVKSEWCKYEL 717
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 14/70 (20%)
Query: 46 LLNAIEASKISIVIFSKNYASSKWCLDELVKILECKNCNGQMVVPVFYHVHPSDVRNQTG 105
L I+ SKIS+ IFS+ SK ++L+K N + +P+FY V + TG
Sbjct: 87 LFKRIQDSKISLAIFSE----SKCDFNDLLK----NNESADEAIPIFYKV------DATG 132
Query: 106 SFAKLEKKLK 115
A L+ +K
Sbjct: 133 DLADLQNSVK 142
>sp|Q95LA9|TLR2_BOVIN Toll-like receptor 2 OS=Bos taurus GN=TLR2 PE=2 SV=1
Length = 784
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 14/77 (18%)
Query: 12 YDVFLSFRGEDTG----------DNFTSHLFAALPNR----GDEISLALLNAIEASKISI 57
YD F+S+ D+ ++F L R G I ++++IE S +I
Sbjct: 641 YDAFVSYSERDSYWVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTI 700
Query: 58 VIFSKNYASSKWCLDEL 74
+ S+N+ S+WC EL
Sbjct: 701 FVLSENFVKSEWCKYEL 717
>sp|Q2V897|TLR2_BOSTR Toll-like receptor 2 OS=Boselaphus tragocamelus GN=TLR2 PE=2 SV=1
Length = 784
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 14/77 (18%)
Query: 12 YDVFLSFRGEDTG----------DNFTSHLFAALPNR----GDEISLALLNAIEASKISI 57
YD F+S+ D+ ++F L R G I ++++IE S +I
Sbjct: 641 YDAFVSYSERDSYWVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTI 700
Query: 58 VIFSKNYASSKWCLDEL 74
+ S+N+ S+WC EL
Sbjct: 701 FVLSENFVKSEWCKYEL 717
>sp|B5T267|TLR2_BOSIN Toll-like receptor 2 OS=Bos indicus GN=TLR2 PE=3 SV=1
Length = 784
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 39 GDEISLALLNAIEASKISIVIFSKNYASSKWCLDEL 74
G I ++++IE S +I + S+N+ S+WC EL
Sbjct: 682 GKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYEL 717
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,762,629
Number of Sequences: 539616
Number of extensions: 1449435
Number of successful extensions: 2921
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2888
Number of HSP's gapped (non-prelim): 36
length of query: 119
length of database: 191,569,459
effective HSP length: 86
effective length of query: 33
effective length of database: 145,162,483
effective search space: 4790361939
effective search space used: 4790361939
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)