BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048542
(373 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/297 (39%), Positives = 167/297 (56%), Gaps = 15/297 (5%)
Query: 55 KRYSYPQIIAMTNHFTHK--LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE--FINE 110
KR+S ++ +++F++K LG+GGFG VYKG+L G L+AVK L+ + E F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 111 VSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVA 170
V I H N+++L GFC ++R LVY YM NGS+ + + L W K +A
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 171 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 230
LG+ARG+ YLH+ CD I+H D+K NILLD F V DFGLAK ++ V A R
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX-XAVR 204
Query: 231 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNM-NATRSSKAYFPSWVYD 289
GTIG+IAPE +S G S K+DV+G+G++LLE+ G+R ++ WV
Sbjct: 205 GTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 290 QLNKGG-----DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341
L + D++LQ + E + +L + L C Q +RP M++V+ MLEG
Sbjct: 263 LLKEKKLEALVDVDLQGNYKDEEV--EQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 165/297 (55%), Gaps = 15/297 (5%)
Query: 55 KRYSYPQIIAMTNHFTHK--LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE--FINE 110
KR+S ++ +++F +K LG+GGFG VYKG+L G L+AVK L+ + E F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 111 VSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVA 170
V I H N+++L GFC ++R LVY YM NGS+ + + L W K +A
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 171 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 230
LG+ARG+ YLH+ CD I+H D+K NILLD F V DFGLAK ++ V A R
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX-XAVR 196
Query: 231 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNM-NATRSSKAYFPSWVYD 289
G IG+IAPE +S G S K+DV+G+G++LLE+ G+R ++ WV
Sbjct: 197 GXIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 290 QLNKGG-----DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341
L + D++LQ + E + +L + L C Q +RP M++V+ MLEG
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEV--EQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 157/285 (55%), Gaps = 16/285 (5%)
Query: 66 TNHFTHK--LGQGGFGSVYKGQLQTGGLIAVKM-LENSKFSAEEFINEVSTIGRIHHVNV 122
TN+F HK +G G FG VYKG L+ G +A+K S EEF E+ T+ H ++
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHL 97
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V L+GFC E ++ L+Y+YM NG+L RH++ + S+ WE+ E+ +G ARG+ YLH
Sbjct: 98 VSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT 157
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
I+H D+K NILLD NF+PK++DFG++K + + +GT+GYI PE
Sbjct: 158 R---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFI 214
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG-----DL 297
+ G ++ KSDVY FG+VL E+ R++ + + W + N G D
Sbjct: 215 K--GRLTEKSDVYSFGVVLFEVLCA-RSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDP 271
Query: 298 ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342
L + ES+ RK + C+ + + DRPSM VL LE ++
Sbjct: 272 NLADKIRPESL--RKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/282 (37%), Positives = 154/282 (54%), Gaps = 16/282 (5%)
Query: 66 TNHFTHK--LGQGGFGSVYKGQLQTGGLIAVKM-LENSKFSAEEFINEVSTIGRIHHVNV 122
TN+F HK +G G FG VYKG L+ G +A+K S EEF E+ T+ H ++
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHL 97
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V L+GFC E ++ L+Y+YM NG+L RH++ + S+ WE+ E+ +G ARG+ YLH
Sbjct: 98 VSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT 157
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
I+H D+K NILLD NF+PK++DFG++K + +GT+GYI PE
Sbjct: 158 R---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFI 214
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG-----DL 297
+ G ++ KSDVY FG+VL E+ R++ + + W + N G D
Sbjct: 215 K--GRLTEKSDVYSFGVVLFEVLCA-RSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDP 271
Query: 298 ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
L + ES+ RK + C+ + + DRPSM VL LE
Sbjct: 272 NLADKIRPESL--RKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 57 YSYPQIIAMTNHFT--------HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE-- 106
+S+ ++ +TN+F +K+G+GGFG VYKG + + K+ + EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 107 --FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGS-LDRHVFPKESRGQSLCW 163
F E+ + + H N+V+LLGF S+G LVY YMPNGS LDR L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSW 132
Query: 164 EKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223
++A G A GI +LH + H DIK NILLD F K+SDFGLA+ K
Sbjct: 133 HMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG-------RRNSNMNAT 276
V S GT Y+APE + G ++ KSD+Y FG+VLLE+ G R +
Sbjct: 190 VMXSRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246
Query: 277 RSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336
+ + D ++K + + T +E+M + + C+ K RP + KV +
Sbjct: 247 KEEIEDEEKTIEDYIDK--KMNDADSTSVEAMYS-----VASQCLHEKKNKRPDIKKVQQ 299
Query: 337 MLE 339
+L+
Sbjct: 300 LLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 147/303 (48%), Gaps = 35/303 (11%)
Query: 57 YSYPQIIAMTNHFT--------HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE-- 106
+S+ ++ +TN+F +K+G+GGFG VYKG + + K+ + EE
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 107 --FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGS-LDRHVFPKESRGQSLCW 163
F E+ + + H N+V+LLGF S+G LVY YMPNGS LDR L W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSW 126
Query: 164 EKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223
++A G A GI +LH + H DIK NILLD F K+SDFGLA+ K
Sbjct: 127 HMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG-------RRNSNMNAT 276
V GT Y+APE + G ++ KSD+Y FG+VLLE+ G R +
Sbjct: 184 VMXXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 240
Query: 277 RSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336
+ + D ++K + + T +E+M + + C+ K RP + KV +
Sbjct: 241 KEEIEDEEKTIEDYIDK--KMNDADSTSVEAMYS-----VASQCLHEKKNKRPDIKKVQQ 293
Query: 337 MLE 339
+L+
Sbjct: 294 LLQ 296
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 147/303 (48%), Gaps = 35/303 (11%)
Query: 57 YSYPQIIAMTNHFT--------HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE-- 106
+S+ ++ +TN+F +K+G+GGFG VYKG + + K+ + EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 107 --FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGS-LDRHVFPKESRGQSLCW 163
F E+ + + H N+V+LLGF S+G LVY YMPNGS LDR L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSW 132
Query: 164 EKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223
++A G A GI +LH + H DIK NILLD F K+SDFGLA+ K
Sbjct: 133 HMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG-------RRNSNMNAT 276
V GT Y+APE + G ++ KSD+Y FG+VLLE+ G R +
Sbjct: 190 VMXXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246
Query: 277 RSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336
+ + D ++K + + T +E+M + + C+ K RP + KV +
Sbjct: 247 KEEIEDEEKTIEDYIDK--KMNDADSTSVEAMYS-----VASQCLHEKKNKRPDIKKVQQ 299
Query: 337 MLE 339
+L+
Sbjct: 300 LLQ 302
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 138/296 (46%), Gaps = 21/296 (7%)
Query: 57 YSYPQIIAMTNHFT--------HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE-- 106
+S+ ++ +TN+F +K G+GGFG VYKG + + K+ + EE
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 107 --FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL-DRHVFPKESRGQSLCW 163
F E+ + H N+V+LLGF S+G LVY Y PNGSL DR L W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDR--LSCLDGTPPLSW 123
Query: 164 EKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223
++A G A GI +LH + H DIK NILLD F K+SDFGLA+ K
Sbjct: 124 HXRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF 283
V S GT Y APE + G ++ KSD+Y FG+VLLE+ G + +
Sbjct: 181 VXXSRIVGTTAYXAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 237
Query: 284 PSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
+ D+ D + + +S + C+ K RP + KV ++L+
Sbjct: 238 KEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 146/274 (53%), Gaps = 24/274 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
++G G FG+VYKG+ G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 18 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ ++ + A+V ++ SL H+ E++ + +KL ++A TARG++YLH
Sbjct: 76 YSTK-PQLAIVTQWCEGSSLYHHLHASETKFEM---KKLIDIARQTARGMDYLHAKS--- 128
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 246
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 247 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305
S +SDVY FG+VL E M G SN+N + + + +G +++++
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--------IIEMVGRGS--LSPDLSKV 238
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
S +++ + C++ K +RPS ++L +E
Sbjct: 239 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 143/286 (50%), Gaps = 25/286 (8%)
Query: 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAE---EFINEVSTIGRIHHVNVVQ 124
+ K+G G FG+V++ + G +AVK+L F AE EF+ EV+ + R+ H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+G ++ ++V EY+ GSL R + +R Q L + +A A+G+ YLHN
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNR- 156
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
+ I+H ++K N+L+D + KV DFGL++ K + F+S + GT ++APE++
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
+ KSDVY FG++L E+A ++ N+N + A + +L +L Q
Sbjct: 215 --PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV--GFKCKRLEIPRNLNPQVAA 270
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDDLQMPP 349
IE C + RPS ++++L I PP
Sbjct: 271 IIEG------------CWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 25/286 (8%)
Query: 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAE---EFINEVSTIGRIHHVNVVQ 124
+ K+G G FG+V++ + G +AVK+L F AE EF+ EV+ + R+ H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+G ++ ++V EY+ GSL R + +R Q L + +A A+G+ YLHN
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNR- 156
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
+ I+H D+K N+L+D + KV DFGL++ K + F+ GT ++APE++
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
+ KSDVY FG++L E+A ++ N+N + A + +L +L Q
Sbjct: 215 --PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV--GFKCKRLEIPRNLNPQVAA 270
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDDLQMPP 349
IE C + RPS ++++L I PP
Sbjct: 271 IIEG------------CWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 145/274 (52%), Gaps = 24/274 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
++G G FG+VYKG+ G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 30 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ S + A+V ++ SL H+ E++ + +KL ++A TARG++YLH
Sbjct: 88 Y-STAPQLAIVTQWCEGSSLYHHLHASETKFEM---KKLIDIARQTARGMDYLHAKS--- 140
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 246
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 247 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305
S +SDVY FG+VL E M G SN+N + + + +G +++++
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--------IIEMVGRGS--LSPDLSKV 250
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
S +++ + C++ K +RPS ++L +E
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 146/274 (53%), Gaps = 24/274 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
++G G FG+VYKG+ G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 30 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ ++ + A+V ++ SL H+ E++ + +KL ++A TARG++YLH
Sbjct: 88 YSTK-PQLAIVTQWCEGSSLYHHLHASETKFEM---KKLIDIARQTARGMDYLHAKS--- 140
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 246
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 247 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305
S +SDVY FG+VL E M G SN+N + + + +G +++++
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--------IIEMVGRGS--LSPDLSKV 250
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
S +++ + C++ K +RPS ++L +E
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 129/275 (46%), Gaps = 22/275 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ +V EYMP G+L ++ +E + + L +A + +EYL +
Sbjct: 98 TLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVLLYMATQISSAMEYLEKK---NFI 152
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N T S
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--TFS 209
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VYD L KG +E
Sbjct: 210 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYDLLEKGYRMEQPE------GC 256
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
K+ + C + ADRPS + + E D
Sbjct: 257 PPKVYELMRACWKWSPADRPSFAETHQAFETMFHD 291
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 141/274 (51%), Gaps = 24/274 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
++G G FG+VYKG+ G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ S + A+V ++ SL H+ E++ + + KL ++A TA+G++YLH
Sbjct: 72 Y-STAPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS--- 124
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 246
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 247 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305
S +SDVY FG+VL E M G SN+N R + G +++++
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFM---------VGRGYLSPDLSKV 234
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
S + + + C++ K +RP ++L +E
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 24/274 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
++G G FG+VYKG+ G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 19 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ ++ + A+V ++ SL H+ E++ + + KL ++A TA+G++YLH
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS--- 129
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 246
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 247 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305
S +SDVY FG+VL E M G SN+N R + G +++++
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFM---------VGRGYLSPDLSKV 239
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
S + + + C++ K +RP ++L +E
Sbjct: 240 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 24/274 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
++G G FG+VYKG+ G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ ++ + A+V ++ SL H+ E++ + + KL ++A TA+G++YLH
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS--- 124
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 246
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 247 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305
S +SDVY FG+VL E M G SN+N R + G +++++
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFM---------VGRGYLSPDLSKV 234
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
S + + + C++ K +RP ++L +E
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 24/274 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
++G G FG+VYKG+ G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 19 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ ++ + A+V ++ SL H+ E++ + + KL ++A TA+G++YLH
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS--- 129
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 246
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 247 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305
S +SDVY FG+VL E M G SN+N R + G +++++
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFM---------VGRGYLSPDLSKV 239
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
S + + + C++ K +RP ++L +E
Sbjct: 240 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 24/274 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
++G G FG+VYKG+ G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 41 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ ++ + A+V ++ SL H+ E++ + + KL ++A TA+G++YLH
Sbjct: 99 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS--- 151
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 246
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 247 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305
S +SDVY FG+VL E M G SN+N R + Y +++++
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLS---------PDLSKV 261
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
S + + + C++ K +RP ++L +E
Sbjct: 262 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 295
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 24/274 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
++G G FG+VYKG+ G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 16 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ ++ + A+V ++ SL H+ E++ + + KL ++A TA+G++YLH
Sbjct: 74 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS--- 126
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 246
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 247 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305
S +SDVY FG+VL E M G SN+N R + G +++++
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFM---------VGRGYLSPDLSKV 236
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
S + + + C++ K +RP ++L +E
Sbjct: 237 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 270
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 24/274 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
++G G FG+VYKG+ G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 42 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ ++ + A+V ++ SL H+ E++ + + KL ++A TA+G++YLH
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS--- 152
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 246
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 247 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305
S +SDVY FG+VL E M G SN+N R + Y +++++
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLS---------PDLSKV 262
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
S + + + C++ K +RP ++L +E
Sbjct: 263 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
F ++G G FG V+ G +A+K + S E+FI E + ++ H +VQL G
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
C E + LV+E+M +G L ++ + RG E L + L G+ YL + C+
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLE---EACV 127
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 248
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 184
Query: 249 SCKSDVYGFGMVLLEM 264
S KSDV+ FG+++ E+
Sbjct: 185 SSKSDVWSFGVLMWEV 200
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
F ++G G FG V+ G +A+K + S E+FI E + ++ H +VQL G
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
C E + LV+E+M +G L ++ + RG E L + L G+ YL + C+
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLE---EACV 124
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 248
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 181
Query: 249 SCKSDVYGFGMVLLEM 264
S KSDV+ FG+++ E+
Sbjct: 182 SSKSDVWSFGVLMWEV 197
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 121/213 (56%), Gaps = 13/213 (6%)
Query: 59 YPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFI---NEVSTIG 115
Y +I A + ++G G FG+VYKG+ G +AVK+L+ + E+F NEV+ +
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 116 RIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
+ HVN++ +G+ ++ + A+V ++ SL +H+ +E++ Q +L ++A TA+
Sbjct: 88 KTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMF---QLIDIARQTAQ 143
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGY 235
G++YLH I+H D+K +NI L K+ DFGLA + + + G++ +
Sbjct: 144 GMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 236 IAPELIS-RNFGTVSCKSDVYGFGMVLLEMAGG 267
+APE+I ++ S +SDVY +G+VL E+ G
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
F ++G G FG V+ G +A+K + S E+FI E + ++ H +VQL G
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
C E + LV+E+M +G L ++ + RG E L + L G+ YL + C+
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLE---EACV 122
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 248
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 179
Query: 249 SCKSDVYGFGMVLLEM 264
S KSDV+ FG+++ E+
Sbjct: 180 SSKSDVWSFGVLMWEV 195
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 24/274 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
++G G FG+VYKG+ G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ ++ + A+V ++ SL H+ E++ + + KL ++A TA+G++YLH
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS--- 124
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 246
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 247 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305
S +SDVY FG+VL E M G SN+N R + G +++++
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFM---------VGRGYLSPDLSKV 234
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
S + + + C++ K +RP ++L +E
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 24/274 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
++G G FG+VYKG+ G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 34 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ ++ + A+V ++ SL H+ E++ + + KL ++A TA+G++YLH
Sbjct: 92 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS--- 144
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 246
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 247 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305
S +SDVY FG+VL E M G SN+N R + G +++++
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMV---------GRGYLSPDLSKV 254
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
S + + + C++ K +RP ++L +E
Sbjct: 255 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 288
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 24/274 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
++G G FG+VYKG+ G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 42 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ ++ + A+V ++ SL H+ E++ + + KL ++A TA+G++YLH
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS--- 152
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 246
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 247 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305
S +SDVY FG+VL E M G SN+N R + Y +++++
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLS---------PDLSKV 262
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
S + + + C++ K +RP ++L +E
Sbjct: 263 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 77 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 131
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + F + + + I + APE ++ N S
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-FTAHAGAKFPIKWTAPESLAYN--KFS 188
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A PS VY+ L K +E
Sbjct: 189 IKSDVWAFGVLLWEIA-------TYGMSPYPGIDPSQVYELLEKDYRMERPE------GC 235
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 105/196 (53%), Gaps = 9/196 (4%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
F ++G G FG V+ G +A+K ++ S ++FI E + ++ H +VQL G
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
C E + LV+E+M +G L ++ + RG E L + L G+ YL + C+
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLE---EACV 144
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 248
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 201
Query: 249 SCKSDVYGFGMVLLEM 264
S KSDV+ FG+++ E+
Sbjct: 202 SSKSDVWSFGVLMWEV 217
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
F ++G G FG V+ G +A+K + S E+FI E + ++ H +VQL G
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
C E + LV E+M +G L ++ + RG E L + L G+ YL + C+
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLE---EACV 125
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 248
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 182
Query: 249 SCKSDVYGFGMVLLEM 264
S KSDV+ FG+++ E+
Sbjct: 183 SSKSDVWSFGVLMWEV 198
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G FG VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 77 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 131
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + A + I + APE ++ N S
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA-KFPIKWTAPESLAYN--KFS 188
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A PS VY+ L K +E
Sbjct: 189 IKSDVWAFGVLLWEIA-------TYGMSPYPGIDPSQVYELLEKDYRMERPEGC------ 235
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 77 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 131
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + A + I + APE ++ N S
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA-KFPIKWTAPESLAYN--KFS 188
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A PS VY+ L K +E
Sbjct: 189 IKSDVWAFGVLLWEIA-------TYGMSPYPGIDPSQVYELLEKDYRMERPEGC------ 235
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
F ++G G FG V+ G +A+K + S E+FI E + ++ H +VQL G
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
C E + LV+E+M +G L ++ + RG E L + L G+ YL + +
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLE---EASV 124
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 248
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 181
Query: 249 SCKSDVYGFGMVLLEM 264
S KSDV+ FG+++ E+
Sbjct: 182 SSKSDVWSFGVLMWEV 197
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + +I H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 130/272 (47%), Gaps = 26/272 (9%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 195
Query: 250 CKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIES 307
KSDV+ FG++L E+A G ++ ++ VY+ L K +E
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---------VYELLEKDYRMERPE------ 240
Query: 308 MIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 241 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 237
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 84 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 195
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 242
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 243 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 237
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 237
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 237
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 195
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 242
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 243 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 80 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 134
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAPAGAKFPIKWTAPESLAYN--KFS 191
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 238
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 239 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 237
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 82
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 83 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 137
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 194
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 241
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 242 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 24/271 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL-QNVTEIESM 308
KSDV+ FG++L E+A + S VY+ L K +E + E
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPEGCPEKVYE 243
Query: 309 IARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
+ R C Q +DRPS ++ + E
Sbjct: 244 LMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 78 -EPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 131
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 188
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG++L E+
Sbjct: 189 SDVWSFGILLTEL 201
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 251 -EPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 361
Query: 252 SDVYGFGMVLLEMAGGRR 269
SDV+ FG++L E+ R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAPAGAKFPIKWTAPESLAYN--KFS 192
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 239
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 240 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 251 -EPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 361
Query: 252 SDVYGFGMVLLEMAGGRR 269
SDV+ FG++L E+ R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 74 -EPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 127
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 184
Query: 252 SDVYGFGMVLLEMAGGRR 269
SDV+ FG++L E+ R
Sbjct: 185 SDVWSFGILLTELTTKGR 202
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVIEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 76 -EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 129
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 186
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG++L E+
Sbjct: 187 SDVWSFGILLTEL 199
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 195
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 242
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 243 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 91
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 92 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 146
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 203
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 204 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERP------EGC 250
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 251 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 280
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 12/218 (5%)
Query: 47 RNQQSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE 106
+ Q+ W + P+ T +LG G FG V+ G +AVK L+ S +
Sbjct: 4 KPQKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA 60
Query: 107 FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKL 166
F+ E + + ++ H +V+L ++ ++ EYM NGSL F K G L KL
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKL 117
Query: 167 HEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 226
++A A G+ ++ + +H D++ NIL+ K++DFGLA+ ++N++ +
Sbjct: 118 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAR 173
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 174 EGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 209
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 12/218 (5%)
Query: 47 RNQQSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE 106
+ Q+ W + P+ T +LG G FG V+ G +AVK L+ S +
Sbjct: 3 KPQKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA 59
Query: 107 FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKL 166
F+ E + + ++ H +V+L ++ ++ EYM NGSL F K G L KL
Sbjct: 60 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKL 116
Query: 167 HEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 226
++A A G+ ++ + +H D++ NIL+ K++DFGLA+ ++N++ +
Sbjct: 117 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAR 172
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 173 EGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 208
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 192
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 239
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 240 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 192
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 239
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 240 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVCEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 334 -EPIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 387
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 444
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG++L E+
Sbjct: 445 SDVWSFGILLTEL 457
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 251 -EPIYIVGEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 361
Query: 252 SDVYGFGMVLLEMAGGRR 269
SDV+ FG++L E+ R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 12/218 (5%)
Query: 47 RNQQSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE 106
+ Q+ W + P+ T +LG G FG V+ G +AVK L+ S +
Sbjct: 8 KPQKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA 64
Query: 107 FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKL 166
F+ E + + ++ H +V+L ++ ++ EYM NGSL F K G L KL
Sbjct: 65 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKL 121
Query: 167 HEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 226
++A A G+ ++ + +H D++ NIL+ K++DFGLA+ ++N++ +
Sbjct: 122 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAR 177
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 178 EGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 75 -EPIXIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 128
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N+ + + I + APE + +G + K
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPE--AALYGRFTIK 185
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG++L E+
Sbjct: 186 SDVWSFGILLTEL 198
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D+ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + A + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA-KFPIKWTAPESLAYN--KFS 195
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 242
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 243 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 80 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 134
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+ N L+ N + KV+DFGL++ + A + I + APE ++ N S
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA-KFPIKWTAPESLAYN--KFS 191
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMERPE------GC 238
Query: 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 239 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L +++ A G+ Y+ + +H
Sbjct: 82 -EPIYIVTEYMNKGSLLD--FLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHR 135
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 192
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG++L E+
Sbjct: 193 SDVWSFGILLTEL 205
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM G L F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVMEYMSKGCLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVIEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N+ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 130/272 (47%), Gaps = 26/272 (9%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 285
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 286 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 340
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H ++ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 397
Query: 250 CKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIES 307
KSDV+ FG++L E+A G ++ ++ VY+ L K +E
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---------VYELLEKDYRMERP------E 442
Query: 308 MIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 443 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM G L F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVTEYMSKGCLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L +++ A G+ Y+ + +H
Sbjct: 82 -EPIYIVTEYMNKGSL--LDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHR 135
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLI-EDNEWTARQGAKFPIKWTAPE--AALYGRFTIK 192
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG++L E+
Sbjct: 193 SDVWSFGILLTEL 205
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
KLGQG FG V+ G +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EYM GSL F K G+ L +L ++A A G+ Y+ + +H
Sbjct: 252 -EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 305
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D++ NIL+ N + KV+DFGL + ++N++ + + I + APE + +G + K
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 362
Query: 252 SDVYGFGMVLLEMA 265
SDV+ FG++L E+
Sbjct: 363 SDVWSFGILLTELT 376
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 49 QQSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFI 108
Q+ W + P+ T +LG G FG V+ G +AVK L+ S + F+
Sbjct: 1 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 57
Query: 109 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHE 168
E + + ++ H +V+L ++ ++ EYM NGSL F K G L KL +
Sbjct: 58 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 114
Query: 169 VALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 228
+A A G+ ++ + +H D++ NIL+ K++DFGLA+ ++N+ +
Sbjct: 115 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREG 170
Query: 229 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 171 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 204
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 49 QQSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFI 108
Q+ W + P+ T +LG G FG V+ G +AVK L+ S + F+
Sbjct: 2 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 58
Query: 109 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHE 168
E + + ++ H +V+L ++ ++ EYM NGSL F K G L KL +
Sbjct: 59 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 115
Query: 169 VALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 228
+A A G+ ++ + +H D++ NIL+ K++DFGLA+ ++N+ +
Sbjct: 116 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREG 171
Query: 229 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 172 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 205
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 130/284 (45%), Gaps = 39/284 (13%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+LG G FG V+ G +AVK L+ S + F+ E + + + H +V+L
Sbjct: 17 LVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
+ ++ EYM GSL F K G + KL + + A G+ Y+
Sbjct: 77 VTREEPIYIITEYMAKGSL--LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NY 131
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 248
+H D++ N+L+ + + K++DFGLA+ ++N++ + + I + APE I NFG
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAI--NFGCF 188
Query: 249 SCKSDVYGFGMVLLEMAG-------GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301
+ KSDV+ FG++L E+ GR N+++ S P ++ D EL +
Sbjct: 189 TIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMP-----RVENCPD-ELYD 242
Query: 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDDL 345
+ ++ C + KA +RP+ + L+ +DD
Sbjct: 243 IMKM--------------CWKEKAEERPT----FDYLQSVLDDF 268
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 12/218 (5%)
Query: 47 RNQQSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE 106
+ Q+ W + P+ T +LG G FG V+ G +AVK L+ S +
Sbjct: 6 KPQKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA 62
Query: 107 FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKL 166
F+ E + + ++ H +V+L ++ ++ EYM NGSL F K G L KL
Sbjct: 63 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKL 119
Query: 167 HEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 226
++A A G+ ++ + +H D++ NIL+ K++DFGLA+ ++N+ +
Sbjct: 120 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAR 175
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 176 EGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 211
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 12/218 (5%)
Query: 47 RNQQSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE 106
+ Q+ W + P+ T +LG G FG V+ G +AVK L+ S +
Sbjct: 4 KPQKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA 60
Query: 107 FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKL 166
F+ E + + ++ H +V+L ++ ++ EYM NGSL F K G L KL
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKL 117
Query: 167 HEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 226
++A A G+ ++ + +H D++ NIL+ K++DFGLA+ ++N+ +
Sbjct: 118 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAR 173
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 174 EGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 209
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 49 QQSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFI 108
Q+ W + P+ T +LG G FG V+ G +AVK L+ S + F+
Sbjct: 9 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 65
Query: 109 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHE 168
E + + ++ H +V+L ++ ++ EYM NGSL F K G L KL +
Sbjct: 66 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 122
Query: 169 VALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 228
+A A G+ ++ + +H D++ NIL+ K++DFGLA+ ++N+ +
Sbjct: 123 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREG 178
Query: 229 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 179 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 212
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 114/218 (52%), Gaps = 18/218 (8%)
Query: 61 QIIAMTNHFTHKLGQGGFGSVYKGQLQTGGL----IAVKMLEN--SKFSAEEFINEVSTI 114
+I A H +G G G V G+L+ G +A+K L+ ++ +F++E S +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 115 GRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTA 174
G+ H N+++L G + G +V EYM NGSLD F + GQ +L + G
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQ-FTIMQLVGMLRGVG 161
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 234
G+ YL D+ +H D+ N+L+D N + KVSDFGL++ + D + + T G I
Sbjct: 162 AGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD-AAXTTTGGKIP 217
Query: 235 --YIAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRR 269
+ APE I+ F T S SDV+ FG+V+ E +A G R
Sbjct: 218 IRWTAPEAIA--FRTFSSASDVWSFGVVMWEVLAYGER 253
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 113/217 (52%), Gaps = 16/217 (7%)
Query: 61 QIIAMTNHFTHKLGQGGFGSVYKGQLQTGGL----IAVKMLEN--SKFSAEEFINEVSTI 114
+I A H +G G G V G+L+ G +A+K L+ ++ +F++E S +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 115 GRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTA 174
G+ H N+++L G + G +V EYM NGSLD F + GQ +L + G
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQ-FTIMQLVGMLRGVG 161
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV-SISATRGTI 233
G+ YL D+ +H D+ N+L+D N + KVSDFGL++ + D + + + I
Sbjct: 162 AGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPI 218
Query: 234 GYIAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRR 269
+ APE I+ F T S SDV+ FG+V+ E +A G R
Sbjct: 219 RWTAPEAIA--FRTFSSASDVWSFGVVMWEVLAYGER 253
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 12/215 (5%)
Query: 50 QSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFIN 109
+ W + P+ T +LG G FG V+ G +AVK L+ S + F+
Sbjct: 1 KPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA 57
Query: 110 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV 169
E + + ++ H +V+L ++ ++ EYM NGSL F K G L KL ++
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDM 114
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
A A G+ ++ + +H D++ NIL+ K++DFGLA+ ++N++ +
Sbjct: 115 AAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGA 170
Query: 230 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 171 KFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 203
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 136/288 (47%), Gaps = 49/288 (17%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQL 125
+G G FG VYKG L+T +A+K L+ + +F+ E +G+ H N+++L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
G S+ ++ EYM NG+LD+ + K+ L +L + G A G++YL N
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL---QLVGMLRGIAAGMKYLAN--- 165
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELIS 242
+ +H D+ NIL++ N + KVSDFGL++ E+D + T G I + APE IS
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVL--EDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 243 -RNFGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSW------VYDQLNKG 294
R F + SDV+ FG+V+ E M G R P W V +N G
Sbjct: 224 YRKF---TSASDVWSFGIVMWEVMTYGER--------------PYWELSNHEVMKAINDG 266
Query: 295 GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342
L + S I + + + C Q + A RP ++ +L+ I
Sbjct: 267 --FRLPTPMDCPSAIYQLM----MQCWQQERARRPKFADIVSILDKLI 308
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 129/274 (47%), Gaps = 30/274 (10%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 282
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 283 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 337
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H ++ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 394
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFP----SWVYDQLNKGGDLELQNVTEI 305
KSDV+ FG++L E+A + +P S VY+ L K +E
Sbjct: 395 IKSDVWAFGVLLWEIA-----------TYGMSPYPGIDLSQVYELLEKDYRMERP----- 438
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 439 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 129/274 (47%), Gaps = 30/274 (10%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
HKLG G +G VY+G + L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 324
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 325 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 379
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H ++ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 436
Query: 250 CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFP----SWVYDQLNKGGDLELQNVTEI 305
KSDV+ FG++L E+A + +P S VY+ L K +E
Sbjct: 437 IKSDVWAFGVLLWEIA-----------TYGMSPYPGIDLSQVYELLEKDYRMERP----- 480
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
K+ + C Q +DRPS ++ + E
Sbjct: 481 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
Query: 66 TNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 125
T +LG G FG V+ G +AVK L+ S + F+ E + + ++ H +V+L
Sbjct: 9 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL 68
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
++ ++ EYM NGSL F K G L KL ++A A G+ ++ +
Sbjct: 69 YAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---E 122
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
+H D++ NIL+ K++DFGLA+ ++N++ + + I + APE I N+
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAI--NY 179
Query: 246 GTVSCKSDVYGFGMVLLEM 264
GT + KSDV+ FG++L E+
Sbjct: 180 GTFTIKSDVWSFGILLTEI 198
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 132/285 (46%), Gaps = 39/285 (13%)
Query: 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
KLG G FG V+ G +AVK L+ S + F+ E + + + H +V+L
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYA 74
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
++ ++ E+M GSL F K G + KL + + A G+ Y+
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLD--FLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---N 129
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+H D++ N+L+ + + K++DFGLA+ ++N++ + + I + APE I NFG
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAI--NFGC 186
Query: 248 VSCKSDVYGFGMVLLEMAG-------GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300
+ KS+V+ FG++L E+ GR N+++ + S P ++ D EL
Sbjct: 187 FTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMP-----RMENCPD-ELY 240
Query: 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDDL 345
++ ++ C + KA +RP+ + L+ +DD
Sbjct: 241 DIMKM--------------CWKEKAEERPT----FDYLQSVLDDF 267
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
F +LG G FG V G+ + +A+KM++ S +EFI E + + H +VQL G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
C++ ++ EYM NG L ++ R Q+ ++L E+ +EYL +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 126
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 248
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSRGSKFPVRWSPPEVLM--YSKF 183
Query: 249 SCKSDVYGFGMVLLEM 264
S KSD++ FG+++ E+
Sbjct: 184 SSKSDIWAFGVLMWEI 199
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 9/202 (4%)
Query: 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
+LG G FG V+ G +A+K L+ S E F+ E + ++ H +VQL
Sbjct: 12 QLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYA 71
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
SE +V EYM GSL F K+ G++L L ++A A G+ Y+ +
Sbjct: 72 VVSE-EPIYIVTEYMNKGSLLD--FLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MN 125
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+H D++ NIL+ + I K++DFGLA+ ++N+ + + I + APE + +G
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLI-EDNEXTARQGAKFPIKWTAPE--AALYGR 182
Query: 248 VSCKSDVYGFGMVLLEMAGGRR 269
+ KSDV+ FG++L E+ R
Sbjct: 183 FTIKSDVWSFGILLTELVTKGR 204
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 12/215 (5%)
Query: 50 QSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFIN 109
+ W + P+ T +LG G FG V+ G +AVK L+ S + F+
Sbjct: 1 KPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA 57
Query: 110 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV 169
E + + ++ H +V+L ++ ++ EYM NGSL F K G L KL ++
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDM 114
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
A A G+ ++ + +H D++ NIL+ K++DFGLA+ ++N+ +
Sbjct: 115 AAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGA 170
Query: 230 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 171 KFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 203
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
F +LG G FG V G+ + +A+KM++ S +EFI E + + H +VQL G
Sbjct: 12 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
C++ ++ EYM NG L ++ R Q+ ++L E+ +EYL +
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 125
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 248
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 182
Query: 249 SCKSDVYGFGMVLLEM 264
S KSD++ FG+++ E+
Sbjct: 183 SSKSDIWAFGVLMWEI 198
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 12/215 (5%)
Query: 50 QSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFIN 109
+ W + P+ T +LG G FG V+ G +AVK L+ S + F+
Sbjct: 1 KPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA 57
Query: 110 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV 169
E + + ++ H +V+L ++ ++ EYM NGSL F K G L KL ++
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDM 114
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
A A G+ ++ + +H D++ NIL+ K++DFGLA+ ++N+ +
Sbjct: 115 AAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGA 170
Query: 230 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 171 KFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 203
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
F +LG G FG V G+ + +A+KM++ S +EFI E + + H +VQL G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
C++ ++ EYM NG L ++ R Q+ ++L E+ +EYL +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 126
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 248
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 183
Query: 249 SCKSDVYGFGMVLLEM 264
S KSD++ FG+++ E+
Sbjct: 184 SSKSDIWAFGVLMWEI 199
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
F +LG G FG V G+ + +A+KM++ S +EFI E + + H +VQL G
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
C++ ++ EYM NG L ++ R Q+ ++L E+ +EYL +
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 121
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 248
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 178
Query: 249 SCKSDVYGFGMVLLEM 264
S KSD++ FG+++ E+
Sbjct: 179 SSKSDIWAFGVLMWEI 194
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
F +LG G FG V G+ + +A+KM++ S +EFI E + + H +VQL G
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
C++ ++ EYM NG L ++ R Q+ ++L E+ +EYL +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 141
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 248
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 198
Query: 249 SCKSDVYGFGMVLLEM 264
S KSD++ FG+++ E+
Sbjct: 199 SSKSDIWAFGVLMWEI 214
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
F +LG G FG V G+ + +A+KM++ S +EFI E + + H +VQL G
Sbjct: 19 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
C++ ++ EYM NG L ++ R Q+ ++L E+ +EYL +
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 132
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 248
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 189
Query: 249 SCKSDVYGFGMVLLEM 264
S KSD++ FG+++ E+
Sbjct: 190 SSKSDIWAFGVLMWEI 205
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
Query: 66 TNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 125
T +LG G FG V+ G +AVK L+ S + F+ E + + ++ H +V+L
Sbjct: 10 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL 69
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
++ ++ EYM NGSL F K G L KL ++A A G+ ++ +
Sbjct: 70 YAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---E 123
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
+H +++ NIL+ K++DFGLA+ ++N++ + + I + APE I N+
Sbjct: 124 RNYIHRNLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAI--NY 180
Query: 246 GTVSCKSDVYGFGMVLLEM 264
GT + KSDV+ FG++L E+
Sbjct: 181 GTFTIKSDVWSFGILLTEI 199
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 56/291 (19%)
Query: 73 LGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ G +A+K L+ + +F++E S +G+ H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ ++ EYM NGSLD + + R + +L + G G++YL D+
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLS---DM 150
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 243
+H D+ NIL++ N + KVSDFG+++ E+D + TRG I + APE I+
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKIPIRWTAPEAIA- 207
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302
+ + SDV+ +G+V+ E M+ G R P W D+ Q+V
Sbjct: 208 -YRKFTSASDVWSYGIVMWEVMSYGER--------------PYW---------DMSNQDV 243
Query: 303 TE-----------IESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342
+ ++ IA M+ W Q + +DRP +++ ML+ I
Sbjct: 244 IKAIEEGYRLPPPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLDKLI 292
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 56/291 (19%)
Query: 73 LGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ G +A+K L+ + +F++E S +G+ H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ ++ EYM NGSLD + + R + +L + G G++YL D+
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLS---DM 135
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 243
+H D+ NIL++ N + KVSDFG+++ E+D + TRG I + APE I+
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKIPIRWTAPEAIA- 192
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302
+ + SDV+ +G+V+ E M+ G R P W D+ Q+V
Sbjct: 193 -YRKFTSASDVWSYGIVMWEVMSYGER--------------PYW---------DMSNQDV 228
Query: 303 TE-----------IESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342
+ ++ IA M+ W Q + +DRP +++ ML+ I
Sbjct: 229 IKAIEEGYRLPPPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLDKLI 277
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
+LG G FG V G+ + +AVKM++ S +EF E T+ ++ H +V+ G CS+
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+V EY+ NG L ++ S G+ L +L E+ G+ +L + +H
Sbjct: 75 EYPIYIVTEYISNGCLLNYL---RSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 192 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 251
D+ N L+D + KVSDFG+ ++ ++ +VS T+ + + APE+ ++ S K
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRY-VLDDQYVSSVGTKFPVKWSAPEVF--HYFKYSSK 185
Query: 252 SDVYGFGMVLLEM 264
SDV+ FG+++ E+
Sbjct: 186 SDVWAFGILMWEV 198
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 139/292 (47%), Gaps = 58/292 (19%)
Query: 73 LGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ G +A+K L+ + +F++E S +G+ H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ ++ EYM NGSLD + + R + +L + G G++YL D+
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLS---DM 129
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELIS- 242
+H D+ NIL++ N + KVSDFG+++ E+D + TRG I + APE I+
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 243 RNFGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301
R F + SDV+ +G+V+ E M+ G R P W D+ Q+
Sbjct: 188 RKFTSA---SDVWSYGIVMWEVMSYGER--------------PYW---------DMSNQD 221
Query: 302 VTE-----------IESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342
V + ++ IA M+ W Q + +DRP +++ ML+ I
Sbjct: 222 VIKAIEEGYRLPPPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLDKLI 271
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 114/207 (55%), Gaps = 18/207 (8%)
Query: 73 LGQGGFGSVYKGQLQTGG----LIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G L+ G +A+K L++ ++ +F++E S +G+ H NV+ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ + ++ E+M NGSLD F +++ GQ + L + G A G++YL D+
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDS--FLRQNDGQFTVIQ-LVGMLRGIAAGMKYL---ADM 154
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE-NDFVSISATRGTIG--YIAPELISR 243
+H D+ NIL++ N + KVSDFGL++F + +D SA G I + APE I
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI-- 212
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRR 269
+ + SDV+ +G+V+ E M+ G R
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMSYGER 239
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 110/201 (54%), Gaps = 19/201 (9%)
Query: 73 LGQGGFGSVYKGQLQTGGL----IAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ G +A+K L+ ++ +F+ E S +G+ H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ +V EYM NGSLD F K++ GQ + L + G + G++YL D+
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLD--TFLKKNDGQFTVIQ-LVGMLRGISAGMKYL---SDM 143
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 243
+H D+ NIL++ N + KVSDFGL++ E+D + TRG I + APE I+
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTAPEAIA- 200
Query: 244 NFGTVSCKSDVYGFGMVLLEM 264
F + SDV+ +G+V+ E+
Sbjct: 201 -FRKFTSASDVWSYGIVMWEV 220
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
F +LG G FG V G+ + +A+KM++ S +EFI E + + H +VQL G
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
C++ ++ EYM NG L ++ R Q+ ++L E+ +EYL +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 141
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 248
LH D+ N L++ + KVSDFGL+++ + + S+ ++ + + PE++ +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSV-GSKFPVRWSPPEVLM--YSKF 198
Query: 249 SCKSDVYGFGMVLLEM 264
S KSD++ FG+++ E+
Sbjct: 199 SSKSDIWAFGVLMWEI 214
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 140/285 (49%), Gaps = 44/285 (15%)
Query: 73 LGQGGFGSVYKGQLQTGG----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ G +A+K L+ ++ +F+ E S +G+ H NVV L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G + G +V E+M NG+LD F ++ GQ + L + G A G+ YL D+
Sbjct: 111 GVVTRGKPVMIVIEFMENGALD--AFLRKHDGQFTVIQ-LVGMLRGIAAGMRYL---ADM 164
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 243
+H D+ NIL++ N + KVSDFGL++ E+D ++ T G + + APE I
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRV--IEDDPEAVYTTTGGKIPVRWTAPEAI-- 220
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302
+ + SDV+ +G+V+ E M+ G R P W D N+ D+ ++ +
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGER--------------PYW--DMSNQ--DV-IKAI 261
Query: 303 TEIESMIARKLCMIGLW-----CIQVKAADRPSMTKVLEMLEGSI 342
E + A C GL C Q + A+RP +++ +L+ I
Sbjct: 262 EEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMI 306
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 137/304 (45%), Gaps = 47/304 (15%)
Query: 54 PKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGL---IAVKMLEN--SKFSAEEFI 108
P YP + F +G+G FG V K +++ GL A+K ++ SK +F
Sbjct: 4 PDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 63
Query: 109 NEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPNGSL------------DRHVFPKE 155
E+ + ++ HH N++ LLG C L EY P+G+L D
Sbjct: 64 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 123
Query: 156 SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215
S +L ++L A ARG++YL +H D+ NIL+ N++ K++DFGL++
Sbjct: 124 STASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR 180
Query: 216 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA--GGRRNSNM 273
+ +V + R + ++A E S N+ + SDV+ +G++L E+ GG M
Sbjct: 181 ---GQEVYVKKTMGRLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 235
Query: 274 NATRSSKAYFPSWVYDQLNKGGDLE--LQNVTEIESMIARKLCMIGLWCIQVKAADRPSM 331
+Y++L +G LE L E+ ++ + C + K +RPS
Sbjct: 236 TCAE---------LYEKLPQGYRLEKPLNCDDEVYDLMRQ--------CWREKPYERPSF 278
Query: 332 TKVL 335
++L
Sbjct: 279 AQIL 282
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 137/304 (45%), Gaps = 47/304 (15%)
Query: 54 PKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGL---IAVKMLEN--SKFSAEEFI 108
P YP + F +G+G FG V K +++ GL A+K ++ SK +F
Sbjct: 14 PDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 73
Query: 109 NEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPNGSL------------DRHVFPKE 155
E+ + ++ HH N++ LLG C L EY P+G+L D
Sbjct: 74 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 133
Query: 156 SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215
S +L ++L A ARG++YL +H D+ NIL+ N++ K++DFGL++
Sbjct: 134 STASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR 190
Query: 216 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA--GGRRNSNM 273
+ +V + R + ++A E S N+ + SDV+ +G++L E+ GG M
Sbjct: 191 ---GQEVYVKKTMGRLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 245
Query: 274 NATRSSKAYFPSWVYDQLNKGGDLE--LQNVTEIESMIARKLCMIGLWCIQVKAADRPSM 331
+Y++L +G LE L E+ ++ + C + K +RPS
Sbjct: 246 TCAE---------LYEKLPQGYRLEKPLNCDDEVYDLMRQ--------CWREKPYERPSF 288
Query: 332 TKVL 335
++L
Sbjct: 289 AQIL 292
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 113/207 (54%), Gaps = 18/207 (8%)
Query: 73 LGQGGFGSVYKGQLQTGG----LIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G L+ G +A+K L++ ++ +F++E S +G+ H NV+ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ + ++ E+M NGSLD F +++ GQ + L + G A G++YL D+
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDS--FLRQNDGQFTVIQ-LVGMLRGIAAGMKYL---ADM 128
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE-NDFVSISATRGTIG--YIAPELISR 243
+H + NIL++ N + KVSDFGL++F + +D SA G I + APE I
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI-- 186
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRR 269
+ + SDV+ +G+V+ E M+ G R
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGER 213
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 12/216 (5%)
Query: 49 QQSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFI 108
Q+ W + P+ + KLG G FG V+ +AVK ++ S E F+
Sbjct: 2 QKPWEKDAWEIPR---ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFL 58
Query: 109 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHE 168
E + + + H +V+L ++ ++ E+M GSL + E Q L KL +
Sbjct: 59 AEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLID 115
Query: 169 VALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 228
+ A G+ ++ +H D++ NIL+ + + K++DFGLA+ ++N++ +
Sbjct: 116 FSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREG 171
Query: 229 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I NFG+ + KSDV+ FG++L+E+
Sbjct: 172 AKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEI 205
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 20/207 (9%)
Query: 73 LGQGGFGSVYKGQLQTGGL----IAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ +A+K L+ ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ +V EYM NGSLD + +++ + +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDM 166
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 243
+H D+ NIL++ N + KVSDFGLA+ E+D + TRG I + +PE I+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVL--EDDPEAAYTTRGGKIPIRWTSPEAIA- 223
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRR 269
+ + SDV+ +G+VL E M+ G R
Sbjct: 224 -YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 113/207 (54%), Gaps = 18/207 (8%)
Query: 73 LGQGGFGSVYKGQLQTGG----LIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V +G+L+ G +A+K L+ ++ EF++E S +G+ H N+++L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G + ++ E+M NG+LD F + + GQ +L + G A G+ YL ++
Sbjct: 82 GVVTNSMPVMILTEFMENGALDS--FLRLNDGQ-FTVIQLVGMLRGIASGMRYL---AEM 135
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 243
+H D+ NIL++ N + KVSDFGL++F + + + +++ G I + APE I+
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA- 194
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRR 269
F + SD + +G+V+ E M+ G R
Sbjct: 195 -FRKFTSASDAWSYGIVMWEVMSFGER 220
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 12/218 (5%)
Query: 47 RNQQSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE 106
+ Q+ W + P+ + KLG G FG V+ +AVK ++ S E
Sbjct: 173 KPQKPWEKDAWEIPR---ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA 229
Query: 107 FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKL 166
F+ E + + + H +V+L ++ ++ E+M GSL + E Q L KL
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKL 286
Query: 167 HEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 226
+ + A G+ ++ +H D++ NIL+ + + K++DFGLA+ ++N++ +
Sbjct: 287 IDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAR 342
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I NFG+ + KSDV+ FG++L+E+
Sbjct: 343 EGAKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEI 378
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 113/208 (54%), Gaps = 22/208 (10%)
Query: 73 LGQGGFGSVYKGQLQTGGL----IAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ +A+K L+ ++ +F+ E S +G+ H N+++L
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ +V EYM NGSLD + +++ + +L + G A G++YL D+
Sbjct: 101 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLS---DM 154
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELIS- 242
+H D+ NIL++ N + KVSDFGL++ E+D + TRG I + +PE I+
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPEAIAY 212
Query: 243 RNFGTVSCKSDVYGFGMVLLE-MAGGRR 269
R F + SDV+ +G+VL E M+ G R
Sbjct: 213 RKF---TSASDVWSYGIVLWEVMSYGER 237
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 113/208 (54%), Gaps = 22/208 (10%)
Query: 73 LGQGGFGSVYKGQLQTGGL----IAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ +A+K L+ ++ +F+ E S +G+ H N+++L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ +V EYM NGSLD + +++ + +L + G A G++YL D+
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLS---DM 137
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELIS- 242
+H D+ NIL++ N + KVSDFGL++ E+D + TRG I + +PE I+
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 243 RNFGTVSCKSDVYGFGMVLLE-MAGGRR 269
R F + SDV+ +G+VL E M+ G R
Sbjct: 196 RKF---TSASDVWSYGIVLWEVMSYGER 220
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 18/207 (8%)
Query: 73 LGQGGFGSVYKGQLQTGG----LIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V +G+L+ G +A+K L+ ++ EF++E S +G+ H N+++L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G + ++ E+M NG+LD F + + GQ +L + G A G+ YL ++
Sbjct: 84 GVVTNSMPVMILTEFMENGALDS--FLRLNDGQ-FTVIQLVGMLRGIASGMRYL---AEM 137
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKF-HPKENDFVSISATRGTIG--YIAPELISR 243
+H D+ NIL++ N + KVSDFGL++F +D S+ G I + APE I+
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA- 196
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRR 269
F + SD + +G+V+ E M+ G R
Sbjct: 197 -FRKFTSASDAWSYGIVMWEVMSFGER 222
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 112/207 (54%), Gaps = 20/207 (9%)
Query: 73 LGQGGFGSVYKGQLQTGGL----IAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ +A+K L+ ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ +V EYM NGSLD + +++ + +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDM 166
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 243
+H D+ NIL++ N + KVSDFGL++ E+D + TRG I + +PE I+
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPEAIA- 223
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRR 269
+ + SDV+ +G+VL E M+ G R
Sbjct: 224 -YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 137/304 (45%), Gaps = 47/304 (15%)
Query: 54 PKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGL---IAVKMLEN--SKFSAEEFI 108
P YP + F +G+G FG V K +++ GL A+K ++ SK +F
Sbjct: 11 PDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 70
Query: 109 NEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPNGSL------------DRHVFPKE 155
E+ + ++ HH N++ LLG C L EY P+G+L D
Sbjct: 71 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 130
Query: 156 SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215
S +L ++L A ARG++YL +H ++ NIL+ N++ K++DFGL++
Sbjct: 131 STASTLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR 187
Query: 216 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA--GGRRNSNM 273
+ +V + R + ++A E S N+ + SDV+ +G++L E+ GG M
Sbjct: 188 ---GQEVYVKKTMGRLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 242
Query: 274 NATRSSKAYFPSWVYDQLNKGGDLE--LQNVTEIESMIARKLCMIGLWCIQVKAADRPSM 331
+Y++L +G LE L E+ ++ + C + K +RPS
Sbjct: 243 TCAE---------LYEKLPQGYRLEKPLNCDDEVYDLMRQ--------CWREKPYERPSF 285
Query: 332 TKVL 335
++L
Sbjct: 286 AQIL 289
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 112/207 (54%), Gaps = 20/207 (9%)
Query: 73 LGQGGFGSVYKGQLQTGGL----IAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ +A+K L+ ++ +F+ E S +G+ H N+++L
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ +V EYM NGSLD + +++ + +L + G A G++YL D+
Sbjct: 111 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDM 164
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 243
+H D+ NIL++ N + KVSDFGL++ E+D + TRG I + +PE I+
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPEAIA- 221
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRR 269
+ + SDV+ +G+VL E M+ G R
Sbjct: 222 -YRKFTSASDVWSYGIVLWEVMSYGER 247
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 112/207 (54%), Gaps = 20/207 (9%)
Query: 73 LGQGGFGSVYKGQLQTGGL----IAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ +A+K L+ ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ +V EYM NGSLD + +++ + +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDM 166
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 243
+H D+ NIL++ N + KVSDFGL++ E+D + TRG I + +PE I+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPEAIA- 223
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRR 269
+ + SDV+ +G+VL E M+ G R
Sbjct: 224 -YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 112/207 (54%), Gaps = 20/207 (9%)
Query: 73 LGQGGFGSVYKGQLQTGGL----IAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ +A+K L+ ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ +V EYM NGSLD + +++ + +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDM 166
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 243
+H D+ NIL++ N + KVSDFGL++ E+D + TRG I + +PE I+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPEAIA- 223
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRR 269
+ + SDV+ +G+VL E M+ G R
Sbjct: 224 -YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 112/207 (54%), Gaps = 20/207 (9%)
Query: 73 LGQGGFGSVYKGQLQTGGL----IAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ +A+K L+ ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ +V EYM NGSLD + +++ + +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDM 166
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 243
+H D+ NIL++ N + KVSDFGL++ E+D + TRG I + +PE I+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPEAIA- 223
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRR 269
+ + SDV+ +G+VL E M+ G R
Sbjct: 224 -YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 112/207 (54%), Gaps = 20/207 (9%)
Query: 73 LGQGGFGSVYKGQLQTGGL----IAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ +A+K L+ ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ +V EYM NGSLD + +++ + +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDM 166
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 243
+H D+ NIL++ N + KVSDFGL++ E+D + TRG I + +PE I+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPEAIA- 223
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRR 269
+ + SDV+ +G+VL E M+ G R
Sbjct: 224 -YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 12/215 (5%)
Query: 50 QSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFIN 109
+ W + P+ T +LG G G V+ G +AVK L+ S + F+
Sbjct: 1 KPWWEDAWEVPR---ETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA 57
Query: 110 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV 169
E + + ++ H +V+L ++ ++ EYM NGSL F K G L KL ++
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDM 114
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
A A G+ ++ + +H D++ NIL+ K++DFGLA+ ++ + +
Sbjct: 115 AAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDAEXTAREGA 170
Query: 230 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 171 KFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 203
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 20/207 (9%)
Query: 73 LGQGGFGSVYKGQLQTGGL----IAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ +A+K L+ ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ +V EYM NGSLD + +++ + +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDM 166
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 243
+H D+ NIL++ N + KVSDFGL + E+D + TRG I + +PE I+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVL--EDDPEAAYTTRGGKIPIRWTSPEAIA- 223
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRR 269
+ + SDV+ +G+VL E M+ G R
Sbjct: 224 -YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ + R + KL + +G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 130
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ +F + I + APE
Sbjct: 131 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPE 187
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 188 SLTES--KFSVASDVWSFGVVLYEL 210
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 112/208 (53%), Gaps = 22/208 (10%)
Query: 73 LGQGGFGSVYKGQLQTGGL----IAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ +A+K L+ ++ +F+ E S +G+ H N+++L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ +V E M NGSLD + +++ + +L + G A G++YL D+
Sbjct: 84 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLS---DM 137
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELIS- 242
+H D+ NIL++ N + KVSDFGL++ E+D + TRG I + +PE I+
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 243 RNFGTVSCKSDVYGFGMVLLE-MAGGRR 269
R F + SDV+ +G+VL E M+ G R
Sbjct: 196 RKF---TSASDVWSYGIVLWEVMSYGER 220
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 112/208 (53%), Gaps = 22/208 (10%)
Query: 73 LGQGGFGSVYKGQLQTGGL----IAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ +A+K L+ ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ +V E M NGSLD + +++ + +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDM 166
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELIS- 242
+H D+ NIL++ N + KVSDFGL++ E+D + TRG I + +PE I+
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 243 RNFGTVSCKSDVYGFGMVLLE-MAGGRR 269
R F + SDV+ +G+VL E M+ G R
Sbjct: 225 RKF---TSASDVWSYGIVLWEVMSYGER 249
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 20/207 (9%)
Query: 73 LGQGGFGSVYKGQLQTGGL----IAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G FG V G+L+ +A+K L+ ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G ++ +V E M NGSLD + +++ + +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDM 166
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 243
+H D+ NIL++ N + KVSDFGL++ E+D + TRG I + +PE I+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPEAIA- 223
Query: 244 NFGTVSCKSDVYGFGMVLLE-MAGGRR 269
+ + SDV+ +G+VL E M+ G R
Sbjct: 224 -YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ + R + KL + +G+EYL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 129
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 130 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 186
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 187 SLTES--KFSVASDVWSFGVVLYEL 209
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ + R + KL + +G+EYL
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 128
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 129 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 185
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 186 SLTES--KFSVASDVWSFGVVLYEL 208
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ + R + KL + +G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 130
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 131 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 188 SLTES--KFSVASDVWSFGVVLYEL 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ + R + KL + +G+EYL
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 134
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 135 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 191
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 192 SLTES--KFSVASDVWSFGVVLYEL 214
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ + R + KL + +G+EYL
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 135
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 136 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 192
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 193 SLTES--KFSVASDVWSFGVVLYEL 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ + R + KL + +G+EYL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 161
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 162 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 218
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 219 SLTES--KFSVASDVWSFGVVLYEL 241
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ + R + KL + +G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 133
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 134 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 191 SLTES--KFSVASDVWSFGVVLYEL 213
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ + R + KL + +G+EYL
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 136
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 137 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 193
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 194 SLTES--KFSVASDVWSFGVVLYEL 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ + R + KL + +G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 130
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 131 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 188 SLTES--KFSVASDVWSFGVVLYEL 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ + R + KL + +G+EYL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 137
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 138 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 194
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 195 SLTES--KFSVASDVWSFGVVLYEL 217
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ + R + KL + +G+EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 148
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 149 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 205
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 206 SLTES--KFSVASDVWSFGVVLYEL 228
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ + R + KL + +G+EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 148
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 149 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 205
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 206 SLTES--KFSVASDVWSFGVVLYEL 228
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ ++ + + KL + +G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QAHAERIDHIKLLQYTSQICKGMEYL 133
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 134 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 191 SLTES--KFSVASDVWSFGVVLYEL 213
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ EY+P GSL ++ + R + KL + +G+EYL
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 131
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H ++ NIL+++ K+ DFGL K P++ ++ + I + APE
Sbjct: 132 --GTKRYI-HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPE 188
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 189 SLTES--KFSVASDVWSFGVVLYEL 211
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG-FCSE 131
+G+G FG V G + G +AVK ++N +A+ F+ E S + ++ H N+VQLLG E
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQS-LCWEKLHEVALGTARGIEYLHNGCDVCILH 190
+V EYM GSL ++ SRG+S L + L + +L +EYL +H
Sbjct: 87 KGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 140
Query: 191 FDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSC 250
D+ N+L+ + + KVSDFGL K D + + + APE + S
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALREK--KFST 193
Query: 251 KSDVYGFGMVLLEM 264
KSDV+ FG++L E+
Sbjct: 194 KSDVWSFGILLWEI 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG-FCSE 131
+G+G FG V G + G +AVK ++N +A+ F+ E S + ++ H N+VQLLG E
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQS-LCWEKLHEVALGTARGIEYLHNGCDVCILH 190
+V EYM GSL ++ SRG+S L + L + +L +EYL +H
Sbjct: 72 KGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 125
Query: 191 FDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVS 249
D+ N+L+ + + KVSDFGL K D + + + APE L + F T
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALREKKFST-- 178
Query: 250 CKSDVYGFGMVLLEM 264
KSDV+ FG++L E+
Sbjct: 179 -KSDVWSFGILLWEI 192
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG-FCSE 131
+G+G FG V G + G +AVK ++N +A+ F+ E S + ++ H N+VQLLG E
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQS-LCWEKLHEVALGTARGIEYLHNGCDVCILH 190
+V EYM GSL ++ SRG+S L + L + +L +EYL +H
Sbjct: 259 KGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 312
Query: 191 FDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVS 249
D+ N+L+ + + KVSDFGL K D + + + APE L + F T
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-----VKWTAPEALREKKFST-- 365
Query: 250 CKSDVYGFGMVLLEM 264
KSDV+ FG++L E+
Sbjct: 366 -KSDVWSFGILLWEI 379
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG-FCSE 131
+G+G FG V G + G +AVK ++N +A+ F+ E S + ++ H N+VQLLG E
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQS-LCWEKLHEVALGTARGIEYLHNGCDVCILH 190
+V EYM GSL ++ SRG+S L + L + +L +EYL +H
Sbjct: 78 KGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 131
Query: 191 FDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSC 250
D+ N+L+ + + KVSDFGL K D + + + APE + S
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALRE--AAFST 184
Query: 251 KSDVYGFGMVLLEM 264
KSDV+ FG++L E+
Sbjct: 185 KSDVWSFGILLWEI 198
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKG-----QLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 122
F +LG+G FGSV Q TG ++AVK L++S + +F E+ + + H N+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 123 VQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
V+ G C +R L+ E++P GSL ++ + R + KL + +G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI---KLLQYTSQICKGMEYL 133
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 239
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 134 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEM 264
++ + S SDV+ FG+VL E+
Sbjct: 191 SLTES--KFSVASDVWSFGVVLYEL 213
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 22/218 (10%)
Query: 47 RNQQSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE 106
+ Q+ W + P+ + KLG G FG V+ +AVK ++ S E
Sbjct: 167 KPQKPWEKDAWEIPR---ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA 223
Query: 107 FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKL 166
F+ E + + + H +V+L ++ ++ E+M GSL + E Q L KL
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKL 280
Query: 167 HEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 226
+ + A G+ ++ +H D++ NIL+ + + K++DFGLA+
Sbjct: 281 IDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARV---------- 327
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I + APE I NFG+ + KSDV+ FG++L+E+
Sbjct: 328 -GAKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEI 362
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 69 FTHKLGQGGFGSVYKGQL-QTGGLIAVK--MLENSKFSAE------EFINEVSTIGRIHH 119
+ ++G+GGFG V+KG+L + ++A+K +L +S+ E EF EV + ++H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 120 VNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
N+V+L G + +V E++P G L + + + W + L A GIEY
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEY 137
Query: 180 LHNGCDVCILHFDIKPHNILL---DHN--FIPKVSDFGLAKFHPKENDFVSISATRGTIG 234
+ N + I+H D++ NI L D N KV+DFGL+ + S+S G
Sbjct: 138 MQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-----QQSVHSVSGLLGNFQ 191
Query: 235 YIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
++APE I + + K+D Y F M+L + G
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 25/208 (12%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKML-----ENSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
+G GGFG VY+ G +AVK E+ + E E + H N++ L G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
C + LV E+ G L+R + G+ + + L A+ ARG+ YLH+ V
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVL-----SGKRIPPDILVNWAVQIARGMNYLHDEAIVP 128
Query: 188 ILHFDIKPHNILLDH--------NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 239
I+H D+K NIL+ N I K++DFGLA +E + + G ++APE
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLA----REWHRTTKMSAAGAYAWMAPE 184
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEMAGG 267
+I + S SDV+ +G++L E+ G
Sbjct: 185 VIRASM--FSKGSDVWSYGVLLWELLTG 210
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 27/214 (12%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 124 QLLGFCSE-GSKRALVYEYMPNGSLDRH------------VFPKESRGQSLCWEKLHEVA 170
LLG C++ G ++ E+ G+L + V P++ L E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 171 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 230
A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D+V R
Sbjct: 146 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 231 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 203 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 27/214 (12%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 124 QLLGFCSE-GSKRALVYEYMPNGSLDRH------------VFPKESRGQSLCWEKLHEVA 170
LLG C++ G ++ E+ G+L + V P++ L E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 171 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 230
A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D+V R
Sbjct: 146 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 231 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 203 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 27/214 (12%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 124 QLLGFCSE-GSKRALVYEYMPNGSLDRH------------VFPKESRGQSLCWEKLHEVA 170
LLG C++ G ++ E+ G+L + V P++ L E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 171 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 230
A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D+V R
Sbjct: 155 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 231 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 212 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 27/214 (12%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 124 QLLGFCSE-GSKRALVYEYMPNGSLDRH------------VFPKESRGQSLCWEKLHEVA 170
LLG C++ G ++ E+ G+L + V P++ L E L +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 171 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 230
A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D+V R
Sbjct: 192 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 231 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 249 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 280
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 127/261 (48%), Gaps = 38/261 (14%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLENS--KFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+V+KG G + +K++E+ + S + + + IG + H ++V+L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C GS LV +Y+P GSL HV ++ RG +L + L + A+G+ YL +
Sbjct: 99 LGLCP-GSSLQLVTQYLPLGSLLDHV--RQHRG-ALGPQLLLNWGVQIAKGMYYLE---E 151
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H ++ N+LL +V+DFG+A P ++ + S + I ++A E I +F
Sbjct: 152 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI--HF 209
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
G + +SDV+ +G+ + E+ G + + V D L KG
Sbjct: 210 GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---------VPDLLEKG--------- 251
Query: 304 EIESMIARKLCMIGLWCIQVK 324
E + ++C I ++ + VK
Sbjct: 252 --ERLAQPQICTIDVYMVMVK 270
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 108/199 (54%), Gaps = 16/199 (8%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLENS--KFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+V+KG G + +K++E+ + S + + + IG + H ++V+L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C GS LV +Y+P GSL HV ++ RG +L + L + A+G+ YL +
Sbjct: 81 LGLCP-GSSLQLVTQYLPLGSLLDHV--RQHRG-ALGPQLLLNWGVQIAKGMYYLE---E 133
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H ++ N+LL +V+DFG+A P ++ + S + I ++A E I +F
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI--HF 191
Query: 246 GTVSCKSDVYGFGMVLLEM 264
G + +SDV+ +G+ + E+
Sbjct: 192 GKYTHQSDVWSYGVTVWEL 210
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 19/206 (9%)
Query: 69 FTHKLGQGGFGSVYKGQLQ-----TGGLIAVKMLENSKFSAE-EFINEVSTIGRIHHVNV 122
+ +LG+G FGSV + TG L+AVK L++S + +F E+ + +H +
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 123 VQLLGFCSEGSKRA---LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
V+ G S G R LV EY+P+G L + +R L +L + +G+EY
Sbjct: 87 VKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEY 142
Query: 180 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAP 238
L G C+ H D+ NIL++ K++DFGLAK P + D+ + + I + AP
Sbjct: 143 L--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 199
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEM 264
E +S N S +SDV+ FG+VL E+
Sbjct: 200 ESLSDNI--FSRQSDVWSFGVVLYEL 223
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 19/206 (9%)
Query: 69 FTHKLGQGGFGSVYKGQLQ-----TGGLIAVKMLENSKFSAE-EFINEVSTIGRIHHVNV 122
+ +LG+G FGSV + TG L+AVK L++S + +F E+ + +H +
Sbjct: 14 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 73
Query: 123 VQLLGFCSEGSKRA---LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
V+ G S G R LV EY+P+G L + +R L +L + +G+EY
Sbjct: 74 VKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEY 129
Query: 180 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAP 238
L G C+ H D+ NIL++ K++DFGLAK P + D+ + + I + AP
Sbjct: 130 L--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 186
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEM 264
E +S N S +SDV+ FG+VL E+
Sbjct: 187 ESLSDNI--FSRQSDVWSFGVVLYEL 210
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 20/203 (9%)
Query: 71 HKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
KLG+G +GSVYK +TG ++A+K + + +E I E+S + + +VV+ G
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVP-VESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ + +V EY GS+ + R ++L +++ + T +G+EYLH + +
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDII---RLRNKTLTEDEIATILQSTLKGLEYLHF---MRKI 147
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR----GTIGYIAPELISRNF 245
H DIK NILL+ K++DFG+A A R GT ++APE+I +
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVA------GQLTDXMAKRNXVIGTPFWMAPEVI-QEI 200
Query: 246 GTVSCKSDVYGFGMVLLEMAGGR 268
G +C +D++ G+ +EMA G+
Sbjct: 201 G-YNCVADIWSLGITAIEMAEGK 222
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 124 QLLGFCSE-GSKRALVYEYMPNGSLDRH------------VFPKESRGQSLCWEKLHEVA 170
LLG C++ G ++ E+ G+L + V P++ L E L +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 171 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 230
A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D V R
Sbjct: 146 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 231 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 203 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 124 QLLGFCSE-GSKRALVYEYMPNGSLDRH------------VFPKESRGQSLCWEKLHEVA 170
LLG C++ G ++ E+ G+L + V P++ L E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 171 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 230
A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D V R
Sbjct: 146 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 231 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 203 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 19/206 (9%)
Query: 69 FTHKLGQGGFGSVYKGQLQ-----TGGLIAVKMLENSKFSAE-EFINEVSTIGRIHHVNV 122
+ +LG+G FGSV + TG L+AVK L++S + +F E+ + +H +
Sbjct: 15 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 74
Query: 123 VQLLGFCSEGSKRA---LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
V+ G S G R LV EY+P+G L + +R L +L + +G+EY
Sbjct: 75 VKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEY 130
Query: 180 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAP 238
L G C+ H D+ NIL++ K++DFGLAK P + D+ + + I + AP
Sbjct: 131 L--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 187
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEM 264
E +S N S +SDV+ FG+VL E+
Sbjct: 188 ESLSDNI--FSRQSDVWSFGVVLYEL 211
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 23/210 (10%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 124 QLLGFCSE-GSKRALVYEYMPNGSLDRHVFPKESR--------GQSLCWEKLHEVALGTA 174
LLG C++ G ++ E+ G+L ++ K + L E L + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 234
+G+E+L + + H D+ NILL + K+ DFGLA+ K+ D+V R +
Sbjct: 155 KGMEFLASRKXI---HRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 235 YIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
++APE I T+ +SDV+ FG++L E+
Sbjct: 212 WMAPETIFDRVYTI--QSDVWSFGVLLWEI 239
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 124 QLLGFCSE-GSKRALVYEYMPNGSLDRH------------VFPKESRGQSLCWEKLHEVA 170
LLG C++ G ++ E+ G+L + V P++ L E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 171 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 230
A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D V R
Sbjct: 155 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 231 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 212 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 117/237 (49%), Gaps = 26/237 (10%)
Query: 42 IEKFLRNQQSWMPK-----RYSYPQIIAMTNH----FTHKLGQGGFGSVYKGQLQTGG-L 91
I+ L QQ K + P+ + NH ++G+G FG V+ G+L+ L
Sbjct: 82 IDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTL 141
Query: 92 IAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDR 149
+AVK + +F+ E + + H N+V+L+G C++ +V E + G D
Sbjct: 142 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG--DF 199
Query: 150 HVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVS 209
F + + G L + L ++ A G+EYL + C CI H D+ N L+ + K+S
Sbjct: 200 LTFLR-TEGARLRVKTLLQMVGDAAAGMEYLESKC--CI-HRDLAARNCLVTEKNVLKIS 255
Query: 210 DFGLAKFHPKENDFVSISA---TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 263
DFG+++ +E D V ++ + + + APE + N+G S +SDV+ FG++L E
Sbjct: 256 DFGMSR---EEADGVXAASGGLRQVPVKWTAPEAL--NYGRYSSESDVWSFGILLWE 307
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 25/214 (11%)
Query: 69 FTHKLGQGGFGSVYKGQL-QTGGLIAVK--MLENSKFSAE------EFINEVSTIGRIHH 119
+ ++G+GGFG V+KG+L + ++A+K +L +S+ E EF EV + ++H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 120 VNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
N+V+L G + +V E++P G L + + + W + L A GIEY
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEY 137
Query: 180 LHNGCDVCILHFDIKPHNILL---DHN--FIPKVSDFGLAKFHPKENDFVSISATRGTIG 234
+ N + I+H D++ NI L D N KV+DFG + + S+S G
Sbjct: 138 MQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS-----QQSVHSVSGLLGNFQ 191
Query: 235 YIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
++APE I + + K+D Y F M+L + G
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 27/214 (12%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 124 QLLGFCSE-GSKRALVYEYMPNGSLDRHV------------FPKESRGQSLCWEKLHEVA 170
LLG C++ G ++ E+ G+L ++ P++ L E L +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 171 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 230
A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D+V R
Sbjct: 157 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 231 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 214 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 245
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 25/214 (11%)
Query: 69 FTHKLGQGGFGSVYKGQL-QTGGLIAVK--MLENSKFSAE------EFINEVSTIGRIHH 119
+ ++G+GGFG V+KG+L + ++A+K +L +S+ E EF EV + ++H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 120 VNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
N+V+L G + +V E++P G L + + + W + L A GIEY
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEY 137
Query: 180 LHNGCDVCILHFDIKPHNILL---DHN--FIPKVSDFGLAKFHPKENDFVSISATRGTIG 234
+ N + I+H D++ NI L D N KV+DF L+ + S+S G
Sbjct: 138 MQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-----QQSVHSVSGLLGNFQ 191
Query: 235 YIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
++APE I + + K+D Y F M+L + G
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 124 QLLGFCSE-GSKRALVYEYMPNGSLD------RHVF----PKESRGQSLCWEKLHEVALG 172
LLG C++ G ++ E+ G+L R+ F P++ L E L +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 173 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT 232
A+G+E+L + + H D+ NILL + K+ DFGLA+ K+ D V R
Sbjct: 157 VAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 233 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 214 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 124 QLLGFCSE-GSKRALVYEYMPNGSLDRH------------VFPKESRGQSLCWEKLHEVA 170
LLG C++ G ++ E+ G+L + V P++ L E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 171 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 230
A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D V R
Sbjct: 155 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 231 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 212 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 19/206 (9%)
Query: 69 FTHKLGQGGFGSVYKGQLQ-----TGGLIAVKMLENSKFSAE-EFINEVSTIGRIHHVNV 122
+ +LG+G FGSV + TG L+AVK L++S + +F E+ + +H +
Sbjct: 11 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 70
Query: 123 VQLLGFCSEGSKRA---LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
V+ G S G R LV EY+P+G L + +R + +L + +G+EY
Sbjct: 71 VKYRGV-SYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDA---SRLLLYSSQICKGMEY 126
Query: 180 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAP 238
L G C+ H D+ NIL++ K++DFGLAK P + D + + I + AP
Sbjct: 127 L--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEM 264
E +S N S +SDV+ FG+VL E+
Sbjct: 184 ESLSDNI--FSRQSDVWSFGVVLYEL 207
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 72 KLGQGGFGSVYKGQLQTGG-LIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGF 128
++G+G FG V+ G+L+ L+AVK + +F+ E + + H N+V+L+G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
C++ +V E + G D F + + G L + L ++ A G+EYL + C CI
Sbjct: 181 CTQKQPIYIVMELVQGG--DFLTFLR-TEGARLRVKTLLQMVGDAAAGMEYLESKC--CI 235
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA---TRGTIGYIAPELISRNF 245
H D+ N L+ + K+SDFG+++ +E D V ++ + + + APE + N+
Sbjct: 236 -HRDLAARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPEAL--NY 289
Query: 246 GTVSCKSDVYGFGMVLLE 263
G S +SDV+ FG++L E
Sbjct: 290 GRYSSESDVWSFGILLWE 307
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 136/290 (46%), Gaps = 44/290 (15%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEG 132
+G+G FG V K + + +A+K +E S+ + FI E+ + R++H N+V+L G C
Sbjct: 17 VGRGAFGVVCKAKWRAKD-VAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACL-- 72
Query: 133 SKRALVYEYMPNGSL-----DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ LV EY GSL P + ++ W L ++G+ YLH+
Sbjct: 73 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKA 126
Query: 188 ILHFDIKPHNILL-DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
++H D+KP N+LL + K+ DFG A + ++ +G+ ++APE+ +
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGS-- 179
Query: 247 TVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE-I 305
S K DV+ +G++L E+ R+ + A+ W N ++N+ + I
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPFD---EIGGPAFRIMWAVH--NGTRPPLIKNLPKPI 234
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEML-------EGSIDDLQMP 348
ES++ R C + RPSM ++++++ G+ + LQ P
Sbjct: 235 ESLMTR--------CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 276
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 136/290 (46%), Gaps = 44/290 (15%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEG 132
+G+G FG V K + + +A+K +E S+ + FI E+ + R++H N+V+L G C
Sbjct: 16 VGRGAFGVVCKAKWRAKD-VAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACL-- 71
Query: 133 SKRALVYEYMPNGSL-----DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ LV EY GSL P + ++ W L ++G+ YLH+
Sbjct: 72 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKA 125
Query: 188 ILHFDIKPHNILL-DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
++H D+KP N+LL + K+ DFG A + ++ +G+ ++APE+ +
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGS-- 178
Query: 247 TVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE-I 305
S K DV+ +G++L E+ R+ + A+ W N ++N+ + I
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFD---EIGGPAFRIMWAVH--NGTRPPLIKNLPKPI 233
Query: 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLEML-------EGSIDDLQMP 348
ES++ R C + RPSM ++++++ G+ + LQ P
Sbjct: 234 ESLMTR--------CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 275
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 124 QLLGFCSE-GSKRALVYEYMPNGSLDRHV-----------FPKESRGQSLCWEKLHEVAL 171
LLG C++ G ++ E+ G+L ++ P++ L E L +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 172 GTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG 231
A+G+E+L CI H D+ NILL + K+ DFGLA+ K+ D V R
Sbjct: 156 QVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 232 TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 213 PLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 23/210 (10%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 124 QLLGFCSE-GSKRALVYEYMPNGSLDRHVFPKESR--------GQSLCWEKLHEVALGTA 174
LLG C++ G ++ E+ G+L ++ K + L E L + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 234
+G+E+L + + H D+ NILL + K+ DFGLA+ K+ D+V R +
Sbjct: 155 KGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 235 YIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
++APE I T+ +SDV+ FG++L E+
Sbjct: 212 WMAPETIFDRVYTI--QSDVWSFGVLLWEI 239
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 180 RREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 180 RREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 180 RREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 180 RREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 123
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 181 RREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQL 125
LG+G +G V T +AVK+++ + E E+ ++H NVV+
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKF 70
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
G EG+ + L EY G L + P + H++ G YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG--- 123
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+ R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 246 GTVSCKSDVYGFGMVLLEMAGG 267
DV+ G+VL M G
Sbjct: 184 FHAE-PVDVWSCGIVLTAMLAG 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 123
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 181 RREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 180 RREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 9 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 121
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 122 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 179 RREFHAE-PVDVWSCGIVLTAMLAG 202
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 180 RREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQL 125
LG+G +G V T +AVK+++ + E E+ ++H NVV+
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
G EG+ + L EY G L + P + H++ G YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG--- 122
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 246 GTVSCKSDVYGFGMVLLEMAGG 267
DV+ G+VL M G
Sbjct: 183 FHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQL 125
LG+G +G V T +AVK+++ + E E+ ++H NVV+
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
G EG+ + L EY G L + P + H++ G YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG--- 122
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 246 GTVSCKSDVYGFGMVLLEMAGG 267
DV+ G+VL M G
Sbjct: 183 FHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQL 125
LG+G +G V T +AVK+++ + E E+ ++H NVV+
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
G EG+ + L EY G L + P + H++ G YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG--- 123
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+ R
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 246 GTVSCKSDVYGFGMVLLEMAGG 267
DV+ G+VL M G
Sbjct: 184 FHAE-PVDVWSCGIVLTAMLAG 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 123
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 181 RREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 123
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 181 RREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 123
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 181 RREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 180 RREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 180 RREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 61 QIIAMTNHFTHKLGQGGFGSVYKGQLQTGGL-IAVKML----ENSKFSAEEFINEVSTIG 115
+II KLG GG +VY + + +A+K + + + + F EV
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSS 66
Query: 116 RIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
++ H N+V ++ E LV EY+ +L ++ ES G L +
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHG-PLSVDTAINFTNQILD 122
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGY 235
GI++ H D+ I+H DIKP NIL+D N K+ DFG+AK E + GT+ Y
Sbjct: 123 GIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKA-LSETSLTQTNHVLGTVQY 178
Query: 236 IAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
+PE ++ T C +D+Y G+VL EM G
Sbjct: 179 FSPEQ-AKGEATDEC-TDIYSIGIVLYEMLVGE 209
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 27/204 (13%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLE-NSKFSAEEFIN-----EVSTIGRIHHVNVVQL 125
LG+G F +VYK + + T ++A+K ++ + A++ IN E+ + + H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVA--LGTARGIEYLHNG 183
L S +LV+++M D V K++ SL H A L T +G+EYLH
Sbjct: 78 LDAFGHKSNISLVFDFM---ETDLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH 131
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELI- 241
ILH D+KP+N+LLD N + K++DFGLAK F + TR Y APEL+
Sbjct: 132 W---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR---WYRAPELLF 185
Query: 242 -SRNFGTVSCKSDVYGFGMVLLEM 264
+R +G D++ G +L E+
Sbjct: 186 GARMYGV---GVDMWAVGCILAEL 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 180 RREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 122
LG+G +G V QL T +AVK+++ + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
V+ G EG+ + L EY G L + P + H++ G YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 123
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGG 267
R DV+ G+VL M G
Sbjct: 181 RREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 72 KLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSA-EEFINEVSTIGRIHHVNVVQ 124
+LG+G FG V+ + + L+AVK L++ +A ++F E + + H ++V+
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVF-------------PKESRGQSLCWEKLHEVAL 171
G C +G +V+EYM +G L++ + P++++G+ + LH +A
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH-IAS 140
Query: 172 GTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA-TR 230
A G+ YL +H D+ N L+ N + K+ DFG+++ D+ + T
Sbjct: 141 QIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR-DVYSTDYYRVGGHTM 196
Query: 231 GTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
I ++ PE ++ R F T +SDV+ FG++L E+
Sbjct: 197 LPIRWMPPESIMYRKFTT---ESDVWSFGVILWEI 228
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 20/206 (9%)
Query: 72 KLGQGGFGSVYKGQLQTGGL-IAVK--MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
KLG G + +VYKG +T G+ +A+K L++ + + I E+S + + H N+V+L
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 129 CSEGSKRALVYEYMPNG---SLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+K LV+E+M N +D RG L K + L +G+ + H
Sbjct: 72 IHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL--LQGLAFCHENK- 128
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELI--S 242
ILH D+KP N+L++ K+ DFGLA+ F N F S+ T+ Y AP+++ S
Sbjct: 129 --ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF---SSEVVTLWYRAPDVLMGS 183
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGGR 268
R T S D++ G +L EM G+
Sbjct: 184 R---TYSTSIDIWSCGCILAEMITGK 206
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 72 KLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSA-EEFINEVSTIGRIHHVNVVQ 124
+LG+G FG V+ + Q L+AVK L+ + SA ++F E + + H ++V+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLC-----------WEKLHEVALGT 173
G C+EG +V+EYM +G L+R + + L +L VA
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 174 ARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTI 233
A G+ YL + +H D+ N L+ + K+ DFG+++ + + T I
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 234 GYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
++ PE ++ R F T +SDV+ FG+VL E+
Sbjct: 202 RWMPPESILYRKFTT---ESDVWSFGVVLWEI 230
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 72 KLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSA-EEFINEVSTIGRIHHVNVVQ 124
+LG+G FG V+ + Q L+AVK L+ + SA ++F E + + H ++V+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLC-----------WEKLHEVALGT 173
G C+EG +V+EYM +G L+R + + L +L VA
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 174 ARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTI 233
A G+ YL + +H D+ N L+ + K+ DFG+++ + + T I
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 234 GYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
++ PE ++ R F T +SDV+ FG+VL E+
Sbjct: 196 RWMPPESILYRKFTT---ESDVWSFGVVLWEI 224
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 72 KLGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 129
K+G+G G V + TG +AVK ++ K E + NEV + HH NVV +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
G + +V E++ G+L V + E++ V L R + YLHN ++
Sbjct: 112 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIATVCLSVLRALSYLHNQ---GVI 163
Query: 190 HFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELISR-N 244
H DIK +ILL + K+SDFG ++K PK V GT ++APE+ISR
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV------GTPYWMAPEVISRLP 217
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR----RNSNMNATRSSKAYFPSWVYD 289
+GT + D++ G++++EM G + A R + P V D
Sbjct: 218 YGT---EVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKD 263
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + +AVKML++ + + I+E+ + I H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLH------------EV 169
++ LLG C++ ++ EY G+L ++ + G C+ H
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 141 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 198 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 230
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + +AVKML++ + + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLH------------EV 169
++ LLG C++ ++ EY G+L ++ + G C+ H
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 70
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ +VY +Y+P + RH + + + + + KL+
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF-IPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 185 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 72 KLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSA-EEFINEVSTIGRIHHVNVVQ 124
+LG+G FG V+ + Q L+AVK L+ + SA ++F E + + H ++V+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLC-----------WEKLHEVALGT 173
G C+EG +V+EYM +G L+R + + L +L VA
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 174 ARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTI 233
A G+ YL + +H D+ N L+ + K+ DFG+++ + + T I
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 234 GYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
++ PE ++ R F T +SDV+ FG+VL E+
Sbjct: 225 RWMPPESILYRKFTT---ESDVWSFGVVLWEI 253
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + + ++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 88/202 (43%), Gaps = 11/202 (5%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQL 125
LG+G G V T +AVK+++ + E E+ ++H NVV+
Sbjct: 10 LVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
G EG+ + L EY G L + P + H++ G YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG--- 122
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
+ I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+APEL+ R
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 246 GTVSCKSDVYGFGMVLLEMAGG 267
DV+ G+VL M G
Sbjct: 183 FHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 25/207 (12%)
Query: 70 THKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLG 127
T LG G FG V+K + GL +A K+++ EE NE+S + ++ H N++QL
Sbjct: 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 128 FCSEGSKRALVYEYMPNGSL-DRHVFPKESRGQSLCWEKLHEVAL--GTARGIEYLHNGC 184
+ LV EY+ G L DR + +S +L + GI ++H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRII------DESYNLTELDTILFMKQICEGIRHMHQ-- 205
Query: 185 DVCILHFDIKPHNILL---DHNFIPKVSDFGLA-KFHPKENDFVSISATRGTIGYIAPEL 240
+ ILH D+KP NIL D I K+ DFGLA ++ P+E + GT ++APE+
Sbjct: 206 -MYILHLDLKPENILCVNRDAKQI-KIIDFGLARRYKPRE----KLKVNFGTPEFLAPEV 259
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEMAGG 267
++ +F VS +D++ G++ + G
Sbjct: 260 VNYDF--VSFPTDMWSVGVIAYMLLSG 284
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 73 LGQGGFGSVYKGQLQ----TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG+G FGSV +G L+ T +AVK ++ +S+ EEF++E + + H NV++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 126 LGFCSEGS-----KRALVYEYMPNGSLDRHVFPK--ESRGQSLCWEKLHEVALGTARGIE 178
LG C E S K ++ +M G L ++ E+ + + + L + + A G+E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
YL N LH D+ N +L + V+DFGL+K + + + + +IA
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMA 265
E ++ T KSDV+ FG+ + E+A
Sbjct: 219 ESLADRVYT--SKSDVWAFGVTMWEIA 243
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + + ++ L
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + + ++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLG-FC 129
+G G +G VYKG+ ++TG L A+K+++ + EE E++ + + HH N+ G F
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 130 SEG-----SKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ + LV E+ GS+ + K ++G +L E + + RG+ +LH
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAYICREILRGLSHLHQHK 149
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPEL 240
++H DIK N+LL N K+ DFG L + + N F+ GT ++APE+
Sbjct: 150 ---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI------GTPYWMAPEV 200
Query: 241 ISRN---FGTVSCKSDVYGFGMVLLEMAGG 267
I+ + T KSD++ G+ +EMA G
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKMLEN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
+LG G FG VYK + +TG L A K++E S+ E++I E+ + H +V+LLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
K ++ E+ P G++D + + RG L ++ V + +LH+ I+
Sbjct: 86 YHDGKLWIMIEFCPGGAVDA-IMLELDRG--LTEPQIQVVCRQMLEALNFLHSK---RII 139
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPELI---S 242
H D+K N+L+ +++DFG++ K K + F+ GT ++APE++ +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCET 193
Query: 243 RNFGTVSCKSDVYGFGMVLLEMA 265
K+D++ G+ L+EMA
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMA 216
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + + ++ L
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKMLEN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
+LG G FG VYK + +TG L A K++E S+ E++I E+ + H +V+LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
K ++ E+ P G++D + + RG L ++ V + +LH+ I+
Sbjct: 78 YHDGKLWIMIEFCPGGAVDA-IMLELDRG--LTEPQIQVVCRQMLEALNFLHSK---RII 131
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPELI---S 242
H D+K N+L+ +++DFG++ K K + F+ GT ++APE++ +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCET 185
Query: 243 RNFGTVSCKSDVYGFGMVLLEMA 265
K+D++ G+ L+EMA
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMA 208
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 35/226 (15%)
Query: 68 HFTHKLGQGGFGSVYK----GQLQTGGLI--AVKMLENSKFSAEE--FINEVSTIGRI-H 118
F LG G FG V G +TG I AVKML+ S+E ++E+ + ++
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 119 HVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQS------------------ 160
H N+V LLG C+ L++EY G L ++ K +
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 161 -LCWEKLHEVALGTARGIEYLH-NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218
L +E L A A+G+E+L C +H D+ N+L+ H + K+ DFGLA+
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
++++V R + ++APE + G + KSDV+ +G++L E+
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFE--GIYTIKSDVWSYGILLWEI 267
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + + +AVKML++ + + ++E+ + I H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + + ++ L
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 209 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 266 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 298
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 68 HFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 121
HF +G+G FG VY G L G I AVK L E +F+ E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 122 VVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
V+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+G+++
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 148
Query: 180 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTIGYIA 237
L + +H D+ N +LD F KV+DFGLA+ + KE D V + + + + ++A
Sbjct: 149 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 238 PE-LISRNFGTVSCKSDVYGFGMVLLEM 264
E L ++ F T KSDV+ FG++L E+
Sbjct: 206 LESLQTQKFTT---KSDVWSFGVLLWEL 230
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + +AVKML++ + + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ +E G + L + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 68 HFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 121
HF +G+G FG VY G L G I AVK L E +F+ E + H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 122 VVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
V+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+G+++
Sbjct: 152 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 207
Query: 180 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTIGYIA 237
L + +H D+ N +LD F KV+DFGLA+ + KE D V + + + + ++A
Sbjct: 208 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 238 PE-LISRNFGTVSCKSDVYGFGMVLLEM 264
E L ++ F T KSDV+ FG++L E+
Sbjct: 265 LESLQTQKFTT---KSDVWSFGVLLWEL 289
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 68 HFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 121
HF +G+G FG VY G L G I AVK L E +F+ E + H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 122 VVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
V+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+G+++
Sbjct: 91 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 146
Query: 180 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTIGYIA 237
L + +H D+ N +LD F KV+DFGLA+ + KE D V + + + + ++A
Sbjct: 147 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 238 PE-LISRNFGTVSCKSDVYGFGMVLLEM 264
E L ++ F T KSDV+ FG++L E+
Sbjct: 204 LESLQTQKFTT---KSDVWSFGVLLWEL 228
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 21/212 (9%)
Query: 64 AMTNHFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRI 117
++ HF +G+G FG VY G L G I AVK L E +F+ E +
Sbjct: 29 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 118 HHVNVVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
H NV+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+
Sbjct: 89 SHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAK 144
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTI 233
G+++L + +H D+ N +LD F KV+DFGLA+ + KE D V + + + +
Sbjct: 145 GMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 234 GYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
++A E L ++ F T KSDV+ FG++L E+
Sbjct: 202 KWMALESLQTQKFTT---KSDVWSFGVLLWEL 230
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 22 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 75
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 134
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 135 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 189
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 190 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 29 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 82
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 141
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 142 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 196
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 197 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 51 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 104
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 163
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 164 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 218
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 219 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + + ++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 45 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 98
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 99 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 157
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 158 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 212
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 213 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + + ++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 29 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 82
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 141
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 142 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 196
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 197 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 120/291 (41%), Gaps = 42/291 (14%)
Query: 73 LGQGGFGSVYKGQLQ------TGGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 124
LG G FG VY+GQ+ + +AVK L S+ +F+ E I +++H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 125 LLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+G + R ++ E M G L R P+ S+ SL L VA A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 182 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
E G + K+D + FG++L E+ S Y P +K
Sbjct: 216 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 255
Query: 299 LQNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
L+ VT M K C I C Q + DRP+ +LE +E D
Sbjct: 256 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 122
+LG G F V K + ++ GL A K ++ + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPAFVAP 186
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 21/212 (9%)
Query: 64 AMTNHFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRI 117
++ HF +G+G FG VY G L G I AVK L E +F+ E +
Sbjct: 30 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 118 HHVNVVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
H NV+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+
Sbjct: 90 SHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAK 145
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTI 233
G+++L + +H D+ N +LD F KV+DFGLA+ + KE D V + + + +
Sbjct: 146 GMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 202
Query: 234 GYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
++A E L ++ F T KSDV+ FG++L E+
Sbjct: 203 KWMALESLQTQKFTT---KSDVWSFGVLLWEL 231
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 70
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 185 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 51 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 104
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 163
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 164 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 218
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 219 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 25 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 78
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 79 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 137
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 138 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 192
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 193 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 30 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 83
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 84 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 142
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 143 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 197
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 198 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 109/212 (51%), Gaps = 21/212 (9%)
Query: 64 AMTNHFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRI 117
++ HF +G+G FG VY G L G I AVK L E +F+ E +
Sbjct: 28 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 118 HHVNVVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
H NV+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+
Sbjct: 88 SHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAK 143
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTI 233
G++YL + +H D+ N +LD F KV+DFGLA+ + KE V + + + +
Sbjct: 144 GMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV 200
Query: 234 GYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
++A E L ++ F T KSDV+ FG++L E+
Sbjct: 201 KWMALESLQTQKFTT---KSDVWSFGVLLWEL 229
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 36 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 89
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 90 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 148
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 149 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 203
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 204 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 70
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 185 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 18 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 71
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 72 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 130
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF-IPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 131 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 185
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 186 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 70
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 185 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + + ++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
ARG+EYL CI H D+ N+L+ N + +++DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 23/213 (10%)
Query: 64 AMTNHFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRI 117
++ HF +G+G FG VY G L G I AVK L E +F+ E +
Sbjct: 48 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 107
Query: 118 HHVNVVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
H NV+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+
Sbjct: 108 SHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAK 163
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT--- 232
G++YL + +H D+ N +LD F KV+DFGLA+ + ++ S+ G
Sbjct: 164 GMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLP 219
Query: 233 IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 220 VKWMALESLQTQKFTT---KSDVWSFGVLLWEL 249
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 23/213 (10%)
Query: 64 AMTNHFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRI 117
++ HF +G+G FG VY G L G I AVK L E +F+ E +
Sbjct: 29 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 118 HHVNVVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
H NV+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+
Sbjct: 89 SHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAK 144
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT--- 232
G++YL + +H D+ N +LD F KV+DFGLA+ + ++ S+ G
Sbjct: 145 GMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLP 200
Query: 233 IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 201 VKWMALESLQTQKFTT---KSDVWSFGVLLWEL 230
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + + +AVKML++ + + ++E+ + I H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + + ++ L
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 155 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 212 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 244
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 23/213 (10%)
Query: 64 AMTNHFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRI 117
++ HF +G+G FG VY G L G I AVK L E +F+ E +
Sbjct: 47 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 106
Query: 118 HHVNVVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
H NV+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+
Sbjct: 107 SHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAK 162
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT--- 232
G++YL + +H D+ N +LD F KV+DFGLA+ + ++ S+ G
Sbjct: 163 GMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLP 218
Query: 233 IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 219 VKWMALESLQTQKFTT---KSDVWSFGVLLWEL 248
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 120/291 (41%), Gaps = 42/291 (14%)
Query: 73 LGQGGFGSVYKGQLQ------TGGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 124
LG G FG VY+GQ+ + +AVK L S+ +F+ E I +++H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 125 LLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+G + R ++ E M G L R P+ S+ SL L VA A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 182 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
E G + K+D + FG++L E+ S Y P +K
Sbjct: 230 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 269
Query: 299 LQNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
L+ VT M K C I C Q + DRP+ +LE +E D
Sbjct: 270 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 68 HFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 121
HF +G+G FG VY G L G I AVK L E +F+ E + H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 122 VVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
V+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+G+++
Sbjct: 98 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 153
Query: 180 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTIGYIA 237
L + +H D+ N +LD F KV+DFGLA+ + KE D V + + + + ++A
Sbjct: 154 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 238 PE-LISRNFGTVSCKSDVYGFGMVLLEM 264
E L ++ F T KSDV+ FG++L E+
Sbjct: 211 LESLQTQKFTT---KSDVWSFGVLLWEL 235
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 23/213 (10%)
Query: 64 AMTNHFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRI 117
++ HF +G+G FG VY G L G I AVK L E +F+ E +
Sbjct: 21 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 80
Query: 118 HHVNVVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
H NV+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+
Sbjct: 81 SHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAK 136
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT--- 232
G++YL + +H D+ N +LD F KV+DFGLA+ + ++ S+ G
Sbjct: 137 GMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLP 192
Query: 233 IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 193 VKWMALESLQTQKFTT---KSDVWSFGVLLWEL 222
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINE--VSTIGRIHHVNVVQLL---- 126
+G+G +G+VYKG L +AVK+ S + + FINE + + + H N+ + +
Sbjct: 21 IGRGRYGAVYKGSLDERP-VAVKVF--SFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 127 GFCSEGS-KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLH---- 181
++G + LV EY PNGSL +++ S S C +A RG+ YLH
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSC-----RLAHSVTRGLAYLHTELP 132
Query: 182 --NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-------FHPKENDFVSISATRGT 232
+ I H D+ N+L+ ++ +SDFGL+ P E D +IS GT
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV-GT 191
Query: 233 IGYIAPELIS-----RNFGTVSCKSDVYGFGMVLLEM 264
I Y+APE++ R+ + + D+Y G++ E+
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + + +AVKML++ + + ++E+ + I H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + + ++ L
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 150 TYQLARGMEYL--ASQKCI-HRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 207 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 239
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 23/213 (10%)
Query: 64 AMTNHFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRI 117
++ HF +G+G FG VY G L G I AVK L E +F+ E +
Sbjct: 29 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 118 HHVNVVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
H NV+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+
Sbjct: 89 SHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAK 144
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT--- 232
G++YL + +H D+ N +LD F KV+DFGLA+ + ++ S+ G
Sbjct: 145 GMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLP 200
Query: 233 IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 201 VKWMALESLQTQKFTT---KSDVWSFGVLLWEL 230
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 53 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 106
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 165
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 166 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 220
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 221 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 42/291 (14%)
Query: 73 LGQGGFGSVYKGQLQ------TGGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 124
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 125 LLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+G + R ++ E M G L R P+ S+ SL L VA A G +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 182 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
E G + K+D + FG++L E+ S Y P +K
Sbjct: 222 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 261
Query: 299 LQNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
L+ VT M K C I C Q + DRP+ +LE +E D
Sbjct: 262 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 312
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 55 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 108
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 167
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 168 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 222
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 223 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + + +AVKML++ + + ++E+ + I H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + + ++ L
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 152 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 209 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 241
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 23/213 (10%)
Query: 64 AMTNHFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRI 117
++ HF +G+G FG VY G L G I AVK L E +F+ E +
Sbjct: 26 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 85
Query: 118 HHVNVVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
H NV+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+
Sbjct: 86 SHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAK 141
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT--- 232
G++YL + +H D+ N +LD F KV+DFGLA+ + ++ S+ G
Sbjct: 142 GMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLP 197
Query: 233 IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 198 VKWMALESLQTQKFTT---KSDVWSFGVLLWEL 227
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 96 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 149
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 208
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 209 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 263
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 264 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 21 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 74
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 75 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 133
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 134 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 188
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 189 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 42/291 (14%)
Query: 73 LGQGGFGSVYKGQLQ------TGGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 124
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 125 LLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+G + R ++ E M G L R P+ S+ SL L VA A G +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 182 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
E G + K+D + FG++L E+ S Y P +K
Sbjct: 242 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 281
Query: 299 LQNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
L+ VT M K C I C Q + DRP+ +LE +E D
Sbjct: 282 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 332
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 23/213 (10%)
Query: 64 AMTNHFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRI 117
++ HF +G+G FG VY G L G I AVK L E +F+ E +
Sbjct: 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 83
Query: 118 HHVNVVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
H NV+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+
Sbjct: 84 SHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAK 139
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT--- 232
G++YL + +H D+ N +LD F KV+DFGLA+ + ++ S+ G
Sbjct: 140 GMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLP 195
Query: 233 IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 196 VKWMALESLQTQKFTT---KSDVWSFGVLLWEL 225
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 23/213 (10%)
Query: 64 AMTNHFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRI 117
++ HF +G+G FG VY G L G I AVK L E +F+ E +
Sbjct: 28 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 118 HHVNVVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
H NV+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+
Sbjct: 88 SHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAK 143
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT--- 232
G++YL + +H D+ N +LD F KV+DFGLA+ + ++ S+ G
Sbjct: 144 GMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLP 199
Query: 233 IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 200 VKWMALESLQTQKFTT---KSDVWSFGVLLWEL 229
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 28/210 (13%)
Query: 74 GQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS 133
+G FG V+K QL +AVK+ + + EV ++ + H N++Q +G G+
Sbjct: 33 ARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 134 ----KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLH-------N 182
L+ + GSL + + + W +L +A ARG+ YLH +
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISATRGTIG---YIAP 238
G I H DIK N+LL +N ++DFGLA KF + S T G +G Y+AP
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK----SAGDTHGQVGTRRYMAP 202
Query: 239 ELI--SRNFGTVS-CKSDVYGFGMVLLEMA 265
E++ + NF + + D+Y G+VL E+A
Sbjct: 203 EVLEGAINFQRDAFLRIDMYAMGLVLWELA 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 23/213 (10%)
Query: 64 AMTNHFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRI 117
++ HF +G+G FG VY G L G I AVK L E +F+ E +
Sbjct: 27 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 118 HHVNVVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
H NV+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+
Sbjct: 87 SHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAK 142
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT--- 232
G++YL + +H D+ N +LD F KV+DFGLA+ + ++ S+ G
Sbjct: 143 GMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLP 198
Query: 233 IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 199 VKWMALESLQTQKFTT---KSDVWSFGVLLWEL 228
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 42/291 (14%)
Query: 73 LGQGGFGSVYKGQLQ------TGGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 124
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 125 LLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+G + R ++ E M G L R P+ S+ SL L VA A G +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 182 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
E G + K+D + FG++L E+ S Y P +K
Sbjct: 232 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 271
Query: 299 LQNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
L+ VT M K C I C Q + DRP+ +LE +E D
Sbjct: 272 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 322
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 33/211 (15%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKML--ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
LG+G +G VY G+ L IA+K + +S++S + E++ + H N+VQ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKL--HEVALG-----TARGIEYLHN 182
SE + E +P GSL + K W L +E +G G++YLH
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSK--------WGPLKDNEQTIGFYTKQILEGLKYLH- 139
Query: 183 GCDVCILHFDIKPHNILLD-HNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIA 237
D I+H DIK N+L++ ++ + K+SDFG LA +P F GT+ Y+A
Sbjct: 140 --DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT------GTLQYMA 191
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
PE+I + +D++ G ++EMA G+
Sbjct: 192 PEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 42/291 (14%)
Query: 73 LGQGGFGSVYKGQLQ------TGGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 124
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 125 LLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+G + R ++ E M G L R P+ S+ SL L VA A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 182 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
E G + K+D + FG++L E+ S Y P +K
Sbjct: 216 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 255
Query: 299 LQNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
L+ VT M K C I C Q + DRP+ +LE +E D
Sbjct: 256 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 118/291 (40%), Gaps = 42/291 (14%)
Query: 73 LGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFSAEE--FINEVSTIGRIHHVNVVQ 124
LG G FG VY+GQ+ + +AVK L +E F+ E I + +H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 125 LLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+G + R ++ E M G L R P+ S+ SL L VA A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 182 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
E G + K+D + FG++L E+ S Y P +K
Sbjct: 230 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 269
Query: 299 LQNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
L+ VT M K C I C Q + DRP+ +LE +E D
Sbjct: 270 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 121/257 (47%), Gaps = 26/257 (10%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKML-ENSKFSA-EEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K+L EN+ A +E ++E + + V +L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + LV + MP G L HV +E+RG+ L + L + A+G+ YL D
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHV--RENRGR-LGSQDLLNWCMQIAKGMSYLE---D 137
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
V ++H D+ N+L+ K++DFGLA+ + + I ++A E I R
Sbjct: 138 VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRR 197
Query: 246 GTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304
T +SDV+ +G+ + E M G + + R + D L KG L +
Sbjct: 198 FT--HQSDVWSYGVTVWELMTFGAKPYDGIPARE--------IPDLLEKGERLPQPPICT 247
Query: 305 IES-MIARKLCMIGLWC 320
I+ MI K MI C
Sbjct: 248 IDVYMIMVKCWMIDSEC 264
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 20/212 (9%)
Query: 68 HFTHKLGQGGFGSVYK------GQLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-H 118
F LG G FG V + G+ +AVKML+++ + E+ ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 119 HVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPK------ESRGQSLCWEKLHEVALG 172
H N+V LLG C+ G ++ EY G L + K + G+ L L +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 173 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT 232
A+G+ +L CI H D+ N+LL + + K+ DFGLA+ +++++ R
Sbjct: 169 VAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 233 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++APE I TV +SDV+ +G++L E+
Sbjct: 226 VKWMAPESIFDCVYTV--QSDVWSYGILLWEI 255
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 122
+LG G F V K + ++ GL A K ++ + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 20/212 (9%)
Query: 68 HFTHKLGQGGFGSVYK------GQLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-H 118
F LG G FG V + G+ +AVKML+++ + E+ ++E+ + +
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 100
Query: 119 HVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPK------ESRGQSLCWEKLHEVALG 172
H N+V LLG C+ G ++ EY G L + K + G+ L L +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 173 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT 232
A+G+ +L CI H D+ N+LL + + K+ DFGLA+ +++++ R
Sbjct: 161 VAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 233 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ ++APE I TV +SDV+ +G++L E+
Sbjct: 218 VKWMAPESIFDCVYTV--QSDVWSYGILLWEI 247
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 42/291 (14%)
Query: 73 LGQGGFGSVYKGQLQ------TGGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 124
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 125 LLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+G + R ++ E M G L R P+ S+ SL L VA A G +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 182 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
E G + K+D + FG++L E+ S Y P +K
Sbjct: 230 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 269
Query: 299 LQNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
L+ VT M K C I C Q + DRP+ +LE +E D
Sbjct: 270 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 42/291 (14%)
Query: 73 LGQGGFGSVYKGQLQ------TGGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 124
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 125 LLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+G + R ++ E M G L R P+ S+ SL L VA A G +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 182 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
E G + K+D + FG++L E+ S Y P +K
Sbjct: 207 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 246
Query: 299 LQNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
L+ VT M K C I C Q + DRP+ +LE +E D
Sbjct: 247 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 297
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 42/291 (14%)
Query: 73 LGQGGFGSVYKGQLQ------TGGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 124
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 125 LLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+G + R ++ E M G L R P+ S+ SL L VA A G +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 182 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
E G + K+D + FG++L E+ S Y P +K
Sbjct: 215 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 254
Query: 299 LQNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
L+ VT M K C I C Q + DRP+ +LE +E D
Sbjct: 255 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 42/291 (14%)
Query: 73 LGQGGFGSVYKGQLQ------TGGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 124
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 125 LLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+G + R ++ E M G L R P+ S+ SL L VA A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 182 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
E G + K+D + FG++L E+ S Y P +K
Sbjct: 216 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 255
Query: 299 LQNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
L+ VT M K C I C Q + DRP+ +LE +E D
Sbjct: 256 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 42/291 (14%)
Query: 73 LGQGGFGSVYKGQLQ------TGGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 124
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 125 LLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+G + R ++ E M G L R P+ S+ SL L VA A G +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 182 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
E G + K+D + FG++L E+ S Y P +K
Sbjct: 215 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 254
Query: 299 LQNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
L+ VT M K C I C Q + DRP+ +LE +E D
Sbjct: 255 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 118/291 (40%), Gaps = 42/291 (14%)
Query: 73 LGQGGFGSVYKGQLQ------TGGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 124
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 125 LLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+G + R ++ E M G L R P+ S+ SL L VA A G +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 182 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H DI N LL + K+ DFG+A+ + + + ++ P
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
E G + K+D + FG++L E+ S Y P +K
Sbjct: 256 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 295
Query: 299 LQNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
L+ VT M K C I C Q + DRP+ +LE +E D
Sbjct: 296 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ Y G+L ++ + G + + ++ L
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 125/299 (41%), Gaps = 38/299 (12%)
Query: 58 SYPQIIAMTNHFTHK--LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVS 112
S P I + H LG+G FG K + G + V M E +F E F+ EV
Sbjct: 1 SMPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMV-MKELIRFDEETQRTFLKEVK 59
Query: 113 TIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALG 172
+ + H NV++ +G + + + EY+ G+L + +S W + A
Sbjct: 60 VMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII---KSMDSQYPWSQRVSFAKD 116
Query: 173 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF------HP------KE 220
A G+ YLH+ + I+H D+ HN L+ N V+DFGLA+ P K+
Sbjct: 117 IASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKK 173
Query: 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSK 280
D G ++APE+I N + K DV+ FG+VL E+ GR N++ +
Sbjct: 174 PDRKKRYTVVGNPYWMAPEMI--NGRSYDEKVDVFSFGIVLCEII-GRVNADPD------ 224
Query: 281 AYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
Y P + LN G L+ I + C + RPS K+ LE
Sbjct: 225 -YLPRTMDFGLNVRGFLD----RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 118/291 (40%), Gaps = 42/291 (14%)
Query: 73 LGQGGFGSVYKGQLQ------TGGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 124
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 125 LLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+G + R ++ E M G L R P+ S+ SL L VA A G +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 182 NGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H DI N LL + K+ DFG+A+ + + + ++ P
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
E G + K+D + FG++L E+ S Y P +K
Sbjct: 233 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 272
Query: 299 LQNVTEIESMIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344
L+ VT M K C I C Q + DRP+ +LE +E D
Sbjct: 273 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 323
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 33/211 (15%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKML--ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
LG+G +G VY G+ L IA+K + +S++S + E++ + H N+VQ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKL--HEVALG-----TARGIEYLHN 182
SE + E +P GSL + K W L +E +G G++YLH
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSK--------WGPLKDNEQTIGFYTKQILEGLKYLH- 125
Query: 183 GCDVCILHFDIKPHNILLD-HNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIA 237
D I+H DIK N+L++ ++ + K+SDFG LA +P F GT+ Y+A
Sbjct: 126 --DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT------GTLQYMA 177
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
PE+I + +D++ G ++EMA G+
Sbjct: 178 PEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 107/208 (51%), Gaps = 21/208 (10%)
Query: 68 HFTHKLGQGGFGSVYKGQL--QTGGLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 121
HF +G+G FG VY G L G I AVK L E +F+ E + H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 122 VVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
V+ LLG C SEGS +V YM +G L R+ E+ ++ + L L A+G+++
Sbjct: 94 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 149
Query: 180 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTIGYIA 237
L + +H D+ N +LD F KV+DFGLA+ KE D V + + + + ++A
Sbjct: 150 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 238 PE-LISRNFGTVSCKSDVYGFGMVLLEM 264
E L ++ F T KSDV+ FG++L E+
Sbjct: 207 LESLQTQKFTT---KSDVWSFGVLLWEL 231
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + +AVKML++ + + I+E+ + I H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + L + L
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 149 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 206 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 238
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 122
+LG G F V K + ++ GL A K ++ + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + +AVKML++ + + I+E+ + I H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + L + L
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 148 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 205 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 237
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + +AVKML++ + + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + L + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + +AVKML++ + + I+E+ + I H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + L + L
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 145 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 202 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 234
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 122
+LG G F V K + ++ GL A K ++ + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 35/226 (15%)
Query: 68 HFTHKLGQGGFGSVYKGQ------LQTGGLIAVKML--ENSKFSAEEFINEVSTIGRIHH 119
+ +G+G FG V++ + + ++AVKML E S +F E + + +
Sbjct: 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN 109
Query: 120 VNVVQLLGFCSEGSKRALVYEYMPNGSLD---RHVFP------------KESRGQSL--- 161
N+V+LLG C+ G L++EYM G L+ R + P +R S
Sbjct: 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 162 ---CWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218
C E+L +A A G+ YL + +H D+ N L+ N + K++DFGL++
Sbjct: 170 PLSCAEQLC-IARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY 225
Query: 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ + + I ++ PE I N T +SDV+ +G+VL E+
Sbjct: 226 SADYYKADGNDAIPIRWMPPESIFYNRYTT--ESDVWAYGVVLWEI 269
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 72 KLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSA-EEFINEVSTIGRIHHVNVVQ 124
+LG+G FG V+ + Q L+AVK L+++ +A ++F E + + H ++V+
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRH---------VFPKESRGQSLCWEKLHEVALGTAR 175
G C EG +V+EYM +G L++ + + + L ++ +A A
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGY 235
G+ YL +H D+ N L+ N + K+ DFG+++ + + T I +
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 236 IAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
+ PE ++ R F T +SDV+ G+VL E+
Sbjct: 197 MPPESIMYRKFTT---ESDVWSLGVVLWEI 223
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 122
+LG G F V K + ++ GL A K ++ + S E+ EVS + I H NV
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 105/199 (52%), Gaps = 17/199 (8%)
Query: 72 KLGQGGFGSVYKG--QLQTGGL-IAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+LG G FGSV +G +++ + +A+K+L+ K EE + E + ++ + +V+L+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPK-ESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
G C + LV E G L + + K E S E LH+V++G ++YL +
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG----MKYLE---E 128
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 244
+H D+ N+LL + K+SDFGL+K ++ + + SA + + + APE I N
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI--N 186
Query: 245 FGTVSCKSDVYGFGMVLLE 263
F S +SDV+ +G+ + E
Sbjct: 187 FRKFSSRSDVWSYGVTMWE 205
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 122
+LG G F V K + ++ GL A K ++ + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 122
+LG G F V K + ++ GL A K ++ + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 34/222 (15%)
Query: 69 FTHKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKF--SAEEFINEVSTIGRI-HH 119
F LG G FG V + + +AVKML+ S E ++E+ + + +H
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 120 VNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV---------- 169
+N+V LLG C+ G ++ EY G L F + R +C + +
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 170 ------ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223
+ A+G+ +L CI H D+ NILL H I K+ DFGLA+ ++++
Sbjct: 168 EDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 224 VSISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 264
V R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 225 VVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 263
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ Y G+L ++ + G + + ++ L
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
ARG+EYL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 122
+LG G F V K + ++ GL A K ++ + S E+ EVS + I H NV
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + E L ++ G+ YLH+
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 131
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 132 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 185
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 186 EIV--NYEPLGLEADMWSIGVITYILLSG 212
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 122
+LG G F V K + ++ GL A K ++ + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 122
+LG G F V K + ++ GL A K ++ + S E+ EVS + I H NV
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + E L ++ G+ YLH+
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 131
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 132 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 185
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 186 EIV--NYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 122
+LG G F V K + ++ GL A K ++ + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + +AVKML++ + + I+E+ + I H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + L + L
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 197 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 254 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 286
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVK--MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
KLG+G + +VYKG+ + T L+A+K LE+ + + I EVS + + H N+V L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
LV+EY+ + L +++ + G + + RG+ Y H +
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYL---DDCGNIINMHNVKLFLFQLLRGLAYCHRQK---V 121
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI--SRNFG 246
LH D+KP N+L++ K++DFGLA+ K + T+ Y P+++ S ++
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDILLGSTDYS 179
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
T + D++G G + EMA GR
Sbjct: 180 T---QIDMWGVGCIFYEMATGR 198
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 125
+LG G FG+V KG Q ++ +K N +E + E + + ++ + +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+G C E LV E G L++++ E +H+V++G ++YL +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE---E 129
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 244
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI--N 187
Query: 245 FGTVSCKSDVYGFGMVLLE 263
+ S KSDV+ FG+++ E
Sbjct: 188 YYKFSSKSDVWSFGVLMWE 206
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 110/223 (49%), Gaps = 37/223 (16%)
Query: 73 LGQGGFGSVYKGQL-----QTG-GLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQ 124
LG+G FG V K + G +AVKML+ + +E + ++E + + +++H +V++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG----------------------QSLC 162
L G CS+ L+ EY GSL F +ESR ++L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSL--RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 163 WEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222
L A ++G++YL ++ ++H D+ NIL+ K+SDFGL++ +E+
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
+V S R + ++A E + + T +SDV+ FG++L E+
Sbjct: 206 YVKRSQGRIPVKWMAIESLFDHIYT--TQSDVWSFGVLLWEIV 246
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L+ F E + + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKL 70
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 185 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 34/222 (15%)
Query: 69 FTHKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKF--SAEEFINEVSTIGRI-HH 119
F LG G FG V + + +AVKML+ S E ++E+ + + +H
Sbjct: 43 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 120 VNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV---------- 169
+N+V LLG C+ G ++ EY G L F + R +C + +
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 170 ------ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223
+ A+G+ +L CI H D+ NILL H I K+ DFGLA+ ++++
Sbjct: 161 EDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 224 VSISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 264
V R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 218 VVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 256
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVK-MLENSKFSAEEFINEVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K +L+ F E + + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKL 70
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 185 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 34/222 (15%)
Query: 69 FTHKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKF--SAEEFINEVSTIGRI-HH 119
F LG G FG V + + +AVKML+ S E ++E+ + + +H
Sbjct: 45 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 120 VNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV---------- 169
+N+V LLG C+ G ++ EY G L F + R +C + +
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 170 ------ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223
+ A+G+ +L CI H D+ NILL H I K+ DFGLA+ ++++
Sbjct: 163 EDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 224 VSISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 264
V R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 220 VVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 258
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 122
+LG G F V K + ++ GL A K ++ + S E+ EVS + I H NV
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 73 LGQGGFGSVY--------KGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 121
LG+G FG V K + +AVKML++ + + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG------------QSLCWEKLHEV 169
++ LLG C++ ++ EY G+L ++ + G + L + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 229
A ARG+EYL CI H D+ N+L+ + + K++DFGLA+ + +
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 230 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 34/222 (15%)
Query: 69 FTHKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKF--SAEEFINEVSTIGRI-HH 119
F LG G FG V + + +AVKML+ S E ++E+ + + +H
Sbjct: 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 120 VNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV---------- 169
+N+V LLG C+ G ++ EY G L F + R +C + +
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 170 ------ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223
+ A+G+ +L CI H D+ NILL H I K+ DFGLA+ ++++
Sbjct: 145 EDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 224 VSISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 264
V R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 202 VVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 240
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 122
+LG G F V K + ++ GL A K ++ + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 34/222 (15%)
Query: 69 FTHKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKF--SAEEFINEVSTIGRI-HH 119
F LG G FG V + + +AVKML+ S E ++E+ + + +H
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 120 VNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV---------- 169
+N+V LLG C+ G ++ EY G L F + R +C + +
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 170 ------ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223
+ A+G+ +L CI H D+ NILL H I K+ DFGLA+ ++++
Sbjct: 168 EDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 224 VSISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 264
V R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 225 VVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 263
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 23/213 (10%)
Query: 69 FTHKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 120
+ +LGQG FG VY+G + + +A+K + + E EF+NE S + +
Sbjct: 22 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLC---WEKLHEVALGTA 174
+VV+LLG S+G ++ E M G L R + P+ L K+ ++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--T 232
G+ YL+ +H D+ N ++ +F K+ DFG+ + E D+ +G
Sbjct: 142 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIYETDYYR-KGGKGLLP 196
Query: 233 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
+ +++PE S G + SDV+ FG+VL E+A
Sbjct: 197 VRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGGL---IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 125
F KLG G FG V+ + ++ GL I + S+ E+ E+ + + H N++++
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+ +V E G L + ++RG++L + E+ + Y H+
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-- 143
Query: 186 VCILHFDIKPHNILLD----HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 241
++H D+KP NIL H+ I K+ DFGLA+ ++D S +A GT Y+APE+
Sbjct: 144 -HVVHKDLKPENILFQDTSPHSPI-KIIDFGLAELF--KSDEHSTNAA-GTALYMAPEVF 198
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGG 267
R+ V+ K D++ G+V+ + G
Sbjct: 199 KRD---VTFKCDIWSAGVVMYFLLTG 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 112/222 (50%), Gaps = 31/222 (13%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVKMLENSKFSAEEFIN-EVSTIGRI 117
PQ ++ T+ T +G G FG VY+ +L +G L+A+K + K F N E+ + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK----AFKNRELQIMRKL 70
Query: 118 HHVNVVQL-LGFCSEGSKRALVY-----EYMPNG--SLDRHVFPKESRGQSLCWEKLHEV 169
H N+V+L F S G K+ VY +Y+P + RH + + + + + KL+
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 228
L R + Y+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 229 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 185 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 73 LGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQLLGFC 129
+G GGF V + TG ++A+K+++ + ++ E+ + + H ++ QL
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+K +V EY P G L ++ ++ + E+ V + Y+H+
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSE----EETRVVFRQIVSAVAYVHSQG---YA 130
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+KP N+L D K+ DFGL PK N + G++ Y APELI + +
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELI-QGKSYLG 188
Query: 250 CKSDVYGFGMVLLEMAGG 267
++DV+ G++L + G
Sbjct: 189 SEADVWSMGILLYVLMCG 206
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 27/207 (13%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEE-----FINEVSTIGRIH---HVNV 122
++G G +G+VYK + +G +A+K + + EE + EV+ + R+ H NV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 123 VQLLGFCSEGS-----KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGI 177
V+L+ C+ K LV+E++ D + ++ L E + ++ RG+
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 178 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
++LH C I+H D+KP NIL+ K++DFGLA+ + + ++++ T+ Y A
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALAPVVVTLWYRA 179
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEM 264
PE++ ++ T + D++ G + EM
Sbjct: 180 PEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 125
+LG G FG+V KG Q ++ +K N +E + E + + ++ + +V++
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+G C E LV E G L++++ E +H+V++G ++YL +
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE---E 123
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 244
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 181
Query: 245 FGTVSCKSDVYGFGMVLLE 263
+ S KSDV+ FG+++ E
Sbjct: 182 YYKFSSKSDVWSFGVLMWE 200
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 125
+LG G FG+V KG Q ++ +K N +E + E + + ++ + +V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+G C E LV E G L++++ E +H+V++G ++YL +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE---E 145
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 244
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 203
Query: 245 FGTVSCKSDVYGFGMVLLE 263
+ S KSDV+ FG+++ E
Sbjct: 204 YYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 125
+LG G FG+V KG Q ++ +K N +E + E + + ++ + +V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+G C E LV E G L++++ E +H+V++G ++YL +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE---E 145
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 244
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 203
Query: 245 FGTVSCKSDVYGFGMVLLE 263
+ S KSDV+ FG+++ E
Sbjct: 204 YYKFSSKSDVWSFGVLMWE 222
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 68 HFTHKLGQGGFGSVYK------GQLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-H 118
F LG G FG V + G+ +AVKML+++ + E+ ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 119 HVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
H N+V LLG C+ G ++ EY G L + + + L + +A TA +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRVLETDPAFAIANSTASTRD 165
Query: 179 YLHNGCDV-----------CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227
LH V CI H D+ N+LL + + K+ DFGLA+ +++++
Sbjct: 166 LLHFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE I TV +SDV+ +G++L E+
Sbjct: 225 NARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 259
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEEFINEVSTIGRI---------HHVN 121
++G G +G+VYK + +G +A+K + +ST+ + H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 122 VVQLLGFCSEGS-----KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARG 176
VV+L+ C+ K LV+E++ D + ++ L E + ++ RG
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 132
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 236
+++LH C I+H D+KP NIL+ K++DFGLA+ + + ++++ T+ Y
Sbjct: 133 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALTPVVVTLWYR 186
Query: 237 APELISRNFGTVSCKSDVYGFGMVLLEM 264
APE++ ++ T + D++ G + EM
Sbjct: 187 APEVLLQS--TYATPVDMWSVGCIFAEM 212
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 125
+LG G FG+V KG Q ++ +K N +E + E + + ++ + +V++
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+G C E LV E G L++++ E +H+V++G ++YL +
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE---E 135
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 244
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 136 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 193
Query: 245 FGTVSCKSDVYGFGMVLLE 263
+ S KSDV+ FG+++ E
Sbjct: 194 YYKFSSKSDVWSFGVLMWE 212
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 23/213 (10%)
Query: 69 FTHKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 120
+ +LGQG FG VY+G + + +A+K + + E EF+NE S + +
Sbjct: 22 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLC---WEKLHEVALGTA 174
+VV+LLG S+G ++ E M G L R + P+ L K+ ++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--T 232
G+ YL+ +H D+ N ++ +F K+ DFG+ + E D+ +G
Sbjct: 142 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIYETDYYR-KGGKGLLP 196
Query: 233 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
+ +++PE S G + SDV+ FG+VL E+A
Sbjct: 197 VRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 125
+LG G FG+V KG Q ++ +K N +E + E + + ++ + +V++
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+G C E LV E G L++++ E +H+V++G ++YL +
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE---E 125
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 244
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 183
Query: 245 FGTVSCKSDVYGFGMVLLE 263
+ S KSDV+ FG+++ E
Sbjct: 184 YYKFSSKSDVWSFGVLMWE 202
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 70 THKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHVN 121
+ +LGQG FG VY+G + + +A+K + + E EF+NE S + + +
Sbjct: 21 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 80
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLC---WEKLHEVALGTAR 175
VV+LLG S+G ++ E M G L R + P+ L K+ ++A A
Sbjct: 81 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 140
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--TI 233
G+ YL+ +H D+ N ++ +F K+ DFG+ + E D+ +G +
Sbjct: 141 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIYETDYYR-KGGKGLLPV 195
Query: 234 GYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
+++PE S G + SDV+ FG+VL E+A
Sbjct: 196 RWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 225
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 125
+LG G FG+V KG Q ++ +K N +E + E + + ++ + +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+G C E LV E G L++++ E +H+V++G ++YL +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE---E 129
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 244
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 187
Query: 245 FGTVSCKSDVYGFGMVLLE 263
+ S KSDV+ FG+++ E
Sbjct: 188 YYKFSSKSDVWSFGVLMWE 206
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 23/213 (10%)
Query: 69 FTHKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 120
+ +LGQG FG VY+G + + +A+K + + E EF+NE S + +
Sbjct: 16 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLC---WEKLHEVALGTA 174
+VV+LLG S+G ++ E M G L R + P+ L K+ ++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--T 232
G+ YL+ +H D+ N ++ +F K+ DFG+ + E D+ +G
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIYETDYYR-KGGKGLLP 190
Query: 233 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
+ +++PE S G + SDV+ FG+VL E+A
Sbjct: 191 VRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 125
+LG G FG+V KG Q ++ +K N +E + E + + ++ + +V++
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+G C E LV E G L++++ E +H+V++G ++YL +
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE---E 143
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 244
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 201
Query: 245 FGTVSCKSDVYGFGMVLLE 263
+ S KSDV+ FG+++ E
Sbjct: 202 YYKFSSKSDVWSFGVLMWE 220
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 23/213 (10%)
Query: 69 FTHKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 120
+ +LGQG FG VY+G + + +A+K + + E EF+NE S + +
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLC---WEKLHEVALGTA 174
+VV+LLG S+G ++ E M G L R + P+ L K+ ++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--T 232
G+ YL+ +H D+ N ++ +F K+ DFG+ + E D+ +G
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIYETDYYR-KGGKGLLP 203
Query: 233 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
+ +++PE S G + SDV+ FG+VL E+A
Sbjct: 204 VRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 70 THKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHVN 121
+ +LGQG FG VY+G + + +A+K + + E EF+NE S + + +
Sbjct: 24 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 83
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLC---WEKLHEVALGTAR 175
VV+LLG S+G ++ E M G L R + P+ L K+ ++A A
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--TI 233
G+ YL+ +H D+ N ++ +F K+ DFG+ + E D+ +G +
Sbjct: 144 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIYETDYYR-KGGKGLLPV 198
Query: 234 GYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
+++PE S G + SDV+ FG+VL E+A
Sbjct: 199 RWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 23/213 (10%)
Query: 69 FTHKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 120
+ +LGQG FG VY+G + + +A+K + + E EF+NE S + +
Sbjct: 19 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLC---WEKLHEVALGTA 174
+VV+LLG S+G ++ E M G L R + P + L K+ ++A A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--T 232
G+ YL+ +H D+ N ++ +F K+ DFG+ + E D+ +G
Sbjct: 139 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIYETDYYR-KGGKGLLP 193
Query: 233 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
+ +++PE S G + SDV+ FG+VL E+A
Sbjct: 194 VRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 224
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 69 FTHKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 120
+ +LGQG FG VY+G + + +A+K + + E EF+NE S + +
Sbjct: 14 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLC---WEKLHEVALGTA 174
+VV+LLG S+G ++ E M G L R + P+ L K+ ++A A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 234
G+ YL+ +H D+ N ++ +F K+ DFG+ + + + +
Sbjct: 134 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 235 YIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
+++PE S G + SDV+ FG+VL E+A
Sbjct: 191 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 219
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 23/213 (10%)
Query: 69 FTHKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 120
+ +LGQG FG VY+G + + +A+K + + E EF+NE S + +
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLC---WEKLHEVALGTA 174
+VV+LLG S+G ++ E M G L R + P + L K+ ++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--T 232
G+ YL+ +H D+ N ++ +F K+ DFG+ + E D+ +G
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIYETDYYR-KGGKGLLP 203
Query: 233 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
+ +++PE S G + SDV+ FG+VL E+A
Sbjct: 204 VRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 73 LGQGGFGSVYKGQL-----QTG-GLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQ 124
LG+G FG V K + G +AVKML+ + +E + ++E + + +++H +V++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG----------------------QSLC 162
L G CS+ L+ EY GSL F +ESR ++L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSL--RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 163 WEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222
L A ++G++YL ++ ++H D+ NIL+ K+SDFGL++ +E+
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
V S R + ++A E + + T +SDV+ FG++L E+
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYT--TQSDVWSFGVLLWEIV 246
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 27/207 (13%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEE-----FINEVSTIGRIH---HVNV 122
++G G +G+VYK + +G +A+K + + EE + EV+ + R+ H NV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 123 VQLLGFCSEGS-----KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGI 177
V+L+ C+ K LV+E++ D + ++ L E + ++ RG+
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 178 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
++LH C I+H D+KP NIL+ K++DFGLA+ + + +++ T+ Y A
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALDPVVVTLWYRA 179
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEM 264
PE++ ++ T + D++ G + EM
Sbjct: 180 PEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 122
+LG G F V K + ++ GL A K ++ + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 26/217 (11%)
Query: 68 HFTHKLGQGGFGSVYK------GQLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-H 118
F LG G FG V + G+ +AVKML+++ + E+ ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 119 HVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESR-----------GQSLCWEKLH 167
H N+V LLG C+ G ++ EY G L + ++SR +L L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDL-LNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 168 EVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227
+ A+G+ +L CI H D+ N+LL + + K+ DFGLA+ +++++
Sbjct: 168 HFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE I TV +SDV+ +G++L E+
Sbjct: 225 NARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 259
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 72 KLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVV 123
+LGQG FG VY+G + +AVK + S E EF+NE S + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHE---VALGTARGI 177
+LLG S+G +V E M +G L R + P+ L E +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 178 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
YL+ +H D+ N ++ H+F K+ DFG+ + + + + + ++A
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEMA 265
PE S G + SD++ FG+VL E+
Sbjct: 201 PE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 70 THKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHVN 121
+ +LGQG FG VY+G + + +A+K + + E EF+NE S + + +
Sbjct: 52 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 111
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLC---WEKLHEVALGTAR 175
VV+LLG S+G ++ E M G L R + P+ L K+ ++A A
Sbjct: 112 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--TI 233
G+ YL+ +H D+ N ++ +F K+ DFG+ + E D+ +G +
Sbjct: 172 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIYETDYYR-KGGKGLLPV 226
Query: 234 GYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
+++PE S G + SDV+ FG+VL E+A
Sbjct: 227 RWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 256
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 72 KLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVV 123
+LGQG FG VY+G + +AVK + S E EF+NE S + +VV
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHE---VALGTARGI 177
+LLG S+G +V E M +G L R + P+ L E +A A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 178 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
YL+ +H D+ N ++ H+F K+ DFG+ + + + + + ++A
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEMA 265
PE S G + SD++ FG+VL E+
Sbjct: 200 PE--SLKDGVFTTSSDMWSFGVVLWEIT 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 71 HKLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNV 122
+LGQG FG VY+G + +AVK + S E EF+NE S + +V
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHE---VALGTARG 176
V+LLG S+G +V E M +G L R + P+ L E +A A G
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 236
+ YL+ +H D+ N ++ H+F K+ DFG+ + + + + ++
Sbjct: 140 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 237 APELISRNFGTVSCKSDVYGFGMVLLEMA 265
APE S G + SD++ FG+VL E+
Sbjct: 197 APE--SLKDGVFTTSSDMWSFGVVLWEIT 223
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 68 HFTHKLGQGGFGSVYK------GQLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-H 118
F LG G FG V + G+ +AVKML+++ + E+ ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 119 HVNVVQLLGFCSEGSKRALVYEYMPNGSL------------DRHVFPKESRGQSLCWEKL 166
H N+V LLG C+ G ++ EY G L + P + + L L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 167 HEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 226
+ A+G+ +L CI H D+ N+LL + + K+ DFGLA+ +++++
Sbjct: 169 LHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
R + ++APE I TV +SDV+ +G++L E+
Sbjct: 226 GNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 261
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 69 FTHKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 120
+ +LGQG FG VY+G + + +A+K + + E EF+NE S + +
Sbjct: 23 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLC---WEKLHEVALGTA 174
+VV+LLG S+G ++ E M G L R + P+ L K+ ++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 234
G+ YL+ +H D+ N ++ +F K+ DFG+ + + + +
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 235 YIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
+++PE S G + SDV+ FG+VL E+A
Sbjct: 200 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKMLEN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
+LG G FG VYK Q +T L A K+++ S+ E+++ E+ + H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+ G++D + E + L ++ V T + YLH D I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPELI---S 242
H D+K NIL + K++DFG++ + + + F+ GT ++APE++ +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI------GTPYWMAPEVVMCET 211
Query: 243 RNFGTVSCKSDVYGFGMVLLEMA 265
K+DV+ G+ L+EMA
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMA 234
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 72 KLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVV 123
+LGQG FG VY+G + +AVK + S E EF+NE S + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHE---VALGTARGI 177
+LLG S+G +V E M +G L R + P+ L E +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 178 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
YL+ +H D+ N ++ H+F K+ DFG+ + + + + ++A
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEMA 265
PE S G + SD++ FG+VL E+
Sbjct: 201 PE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 71 HKLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNV 122
+LGQG FG VY+G + +AVK + S E EF+NE S + +V
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHE---VALGTARG 176
V+LLG S+G +V E M +G L R + P+ L E +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 236
+ YL+ +H D+ N ++ H+F K+ DFG+ + + + + ++
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 237 APELISRNFGTVSCKSDVYGFGMVLLEMA 265
APE S G + SD++ FG+VL E+
Sbjct: 200 APE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 37/228 (16%)
Query: 61 QIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKML----ENSKFSAEEFINEVSTIGR 116
+ IA T +G+G FG V++G+ + G +AVK+ E S F E V
Sbjct: 38 RTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM---- 92
Query: 117 IHHVNVVQLLGFCSEGSKRA-------LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV 169
+ H N+ LGF + +K LV +Y +GSL F +R ++ E + ++
Sbjct: 93 LRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKL 144
Query: 170 ALGTARGIEYLH-----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224
AL TA G+ +LH I H D+K NIL+ N ++D GLA H D +
Sbjct: 145 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 204
Query: 225 SISATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 265
I+ GT Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 205 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 251
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 37/228 (16%)
Query: 61 QIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKML----ENSKFSAEEFINEVSTIGR 116
+ IA T +G+G FG V++G+ + G +AVK+ E S F E V
Sbjct: 25 RTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM---- 79
Query: 117 IHHVNVVQLLGFCSEGSKRA-------LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV 169
+ H N+ LGF + +K LV +Y +GSL F +R ++ E + ++
Sbjct: 80 LRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKL 131
Query: 170 ALGTARGIEYLH-----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224
AL TA G+ +LH I H D+K NIL+ N ++D GLA H D +
Sbjct: 132 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 191
Query: 225 SISATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 265
I+ GT Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 192 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 238
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKMLEN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
+LG G FG VYK Q +T L A K+++ S+ E+++ E+ + H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+ G++D + E + L ++ V T + YLH D I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPELI---S 242
H D+K NIL + K++DFG++ + + + F+ GT ++APE++ +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI------GTPYWMAPEVVMCET 211
Query: 243 RNFGTVSCKSDVYGFGMVLLEMA 265
K+DV+ G+ L+EMA
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMA 234
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKMLEN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 129
+LG G FG VYK Q +T L A K+++ S+ E+++ E+ + H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ E+ G++D + E + L ++ V T + YLH D I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHP----KENDFVSISATRGTIGYIAPELI---S 242
H D+K NIL + K++DFG++ + + + F+ GT ++APE++ +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI------GTPYWMAPEVVMCET 211
Query: 243 RNFGTVSCKSDVYGFGMVLLEMA 265
K+DV+ G+ L+EMA
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMA 234
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 30/206 (14%)
Query: 72 KLGQGGFGSVYKGQLQTGG-LIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 129
K+G+G G V +++ G L+AVK ++ K E + NEV + H NVV++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 130 SEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G + +V E++ G+L H E + ++C L +++ A+G+
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGV--------- 137
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELIS 242
+H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELIS
Sbjct: 138 --IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELIS 189
Query: 243 R-NFGTVSCKSDVYGFGMVLLEMAGG 267
R +G + D++ G++++EM G
Sbjct: 190 RLPYGP---EVDIWSLGIMVIEMVDG 212
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 29/210 (13%)
Query: 74 GQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS 133
+G FG V+K QL +AVK+ + + E+ + + H N++Q + GS
Sbjct: 24 ARGRFGCVWKAQLMND-FVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGS 82
Query: 134 ----KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC-- 187
+ L+ + GSL ++ +G + W +L VA +RG+ YLH C
Sbjct: 83 NLEVELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 188 ------ILHFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISATRGTIG---YIA 237
I H D K N+LL + ++DFGLA +F P + T G +G Y+A
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPP----GDTHGQVGTRRYMA 193
Query: 238 PELI--SRNFGTVS-CKSDVYGFGMVLLEM 264
PE++ + NF + + D+Y G+VL E+
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWEL 223
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 33/271 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K+L + EF++E + + H ++V+L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFP-KESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
LG C + + LV + MP+G L +V K++ G L L + A+G+ YL
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQIAKGMMYLE--- 157
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
+ ++H D+ N+L+ K++DFGLA+ + + + I ++A E I +
Sbjct: 158 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI--H 215
Query: 245 FGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
+ + +SDV+ +G+ + E M G + + TR + D L KG L +
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE--------IPDLLEKGERLPQPPIC 267
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
I+ + M+ + C + A RP ++
Sbjct: 268 TID------VYMVMVKCWMIDADSRPKFKEL 292
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 24/205 (11%)
Query: 71 HKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 128
K+GQG G+VY + TG +A++ + + +E I NE+ + + N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFP---KESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
G + +V EY+ GSL V E + ++C E L + +E+LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL--------QALEFLHSNQ- 136
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISATRGTIGYIAPELISRN 244
++H DIK NILL + K++DFG A+ P+++ S GT ++APE+++R
Sbjct: 137 --VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPEVVTRK 191
Query: 245 -FGTVSCKSDVYGFGMVLLEMAGGR 268
+G K D++ G++ +EM G
Sbjct: 192 AYGP---KVDIWSLGIMAIEMIEGE 213
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 37/226 (16%)
Query: 63 IAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKML----ENSKFSAEEFINEVSTIGRIH 118
IA T +G+G FG V++G+ + G +AVK+ E S F E V +
Sbjct: 7 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LR 61
Query: 119 HVNVVQLLGFCSEGSKRA-------LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVAL 171
H N+ LGF + +K LV +Y +GSL F +R ++ E + ++AL
Sbjct: 62 HENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLAL 113
Query: 172 GTARGIEYLH-----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 226
TA G+ +LH I H D+K NIL+ N ++D GLA H D + I
Sbjct: 114 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 173
Query: 227 SATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 265
+ GT Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 174 APNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 218
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 30/206 (14%)
Query: 72 KLGQGGFGSVYKGQLQTGG-LIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 129
K+G+G G V +++ G L+AVK ++ K E + NEV + H NVV++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 130 SEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G + +V E++ G+L H E + ++C L +++ A+G+
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGV--------- 146
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELIS 242
+H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELIS
Sbjct: 147 --IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELIS 198
Query: 243 R-NFGTVSCKSDVYGFGMVLLEMAGG 267
R +G + D++ G++++EM G
Sbjct: 199 RLPYGP---EVDIWSLGIMVIEMVDG 221
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 33/271 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K+L + EF++E + + H ++V+L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFP-KESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
LG C + + LV + MP+G L +V K++ G L L + A+G+ YL
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQIAKGMMYLE--- 134
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
+ ++H D+ N+L+ K++DFGLA+ + + + I ++A E I +
Sbjct: 135 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI--H 192
Query: 245 FGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
+ + +SDV+ +G+ + E M G + + TR + D L KG L +
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE--------IPDLLEKGERLPQPPIC 244
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
I+ + M+ + C + A RP ++
Sbjct: 245 TID------VYMVMVKCWMIDADSRPKFKEL 269
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 38/273 (13%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEEFINEVSTIGRIH----HVNVVQLLG 127
LG+G F VY+ + + TG +A+KM++ + V +IH H ++++L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + + LV E NG ++R++ ++R + + G+ YLH+
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLYLHSHG--- 132
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNF 245
ILH D+ N+LL N K++DFGLA P E + GT YI+PE+ +R+
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC----GTPNYISPEIATRSA 188
Query: 246 GTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKG--GDLELQNVT 303
+ +SDV+ G + + GR + + +++ LNK D E+ +
Sbjct: 189 HGL--ESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----------LNKVVLADYEMPSFL 235
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336
IE A+ L ++ ADR S++ VL+
Sbjct: 236 SIE---AKDLIH---QLLRRNPADRLSLSSVLD 262
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEE-----FINEVSTIGRIH---HVNV 122
++G G +G+VYK + +G +A+K + + EE + EV+ + R+ H NV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 123 VQLLGFCSEGS-----KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGI 177
V+L+ C+ K LV+E++ D + ++ L E + ++ RG+
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 178 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
++LH C I+H D+KP NIL+ K++DFGLA+ + + + T+ Y A
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV---TLWYRA 179
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEM 264
PE++ ++ T + D++ G + EM
Sbjct: 180 PEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 30/206 (14%)
Query: 72 KLGQGGFGSVYKGQLQTGG-LIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 129
K+G+G G V +++ G L+AVK ++ K E + NEV + H NVV++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 130 SEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G + +V E++ G+L H E + ++C L +++ A+G+
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGV--------- 148
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELIS 242
+H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELIS
Sbjct: 149 --IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELIS 200
Query: 243 R-NFGTVSCKSDVYGFGMVLLEMAGG 267
R +G + D++ G++++EM G
Sbjct: 201 RLPYGP---EVDIWSLGIMVIEMVDG 223
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 37/226 (16%)
Query: 63 IAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKML----ENSKFSAEEFINEVSTIGRIH 118
IA T +G+G FG V++G+ + G +AVK+ E S F E V +
Sbjct: 2 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LR 56
Query: 119 HVNVVQLLGFCSEGSKRA-------LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVAL 171
H N+ LGF + +K LV +Y +GSL F +R ++ E + ++AL
Sbjct: 57 HENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLAL 108
Query: 172 GTARGIEYLH-----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 226
TA G+ +LH I H D+K NIL+ N ++D GLA H D + I
Sbjct: 109 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 168
Query: 227 SATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 265
+ GT Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 169 APNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 213
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 37/226 (16%)
Query: 63 IAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKML----ENSKFSAEEFINEVSTIGRIH 118
IA T +G+G FG V++G+ + G +AVK+ E S F E V +
Sbjct: 1 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LR 55
Query: 119 HVNVVQLLGFCSEGSKRA-------LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVAL 171
H N+ LGF + +K LV +Y +GSL F +R ++ E + ++AL
Sbjct: 56 HENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLAL 107
Query: 172 GTARGIEYLH-----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 226
TA G+ +LH I H D+K NIL+ N ++D GLA H D + I
Sbjct: 108 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 167
Query: 227 SATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 265
+ GT Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 168 APNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 212
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 125
+LG G FG+V KG Q ++ +K N +E + E + + ++ + +V++
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+G C E LV E G L++++ E +H+V++G ++YL +
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE---E 487
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 244
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 488 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 545
Query: 245 FGTVSCKSDVYGFGMVLLE 263
+ S KSDV+ FG+++ E
Sbjct: 546 YYKFSSKSDVWSFGVLMWE 564
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 125
+LG G FG+V KG Q ++ +K N +E + E + + ++ + +V++
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+G C E LV E G L++++ E +H+V++G ++YL +
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE---E 488
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 244
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 489 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 546
Query: 245 FGTVSCKSDVYGFGMVLLE 263
+ S KSDV+ FG+++ E
Sbjct: 547 YYKFSSKSDVWSFGVLMWE 565
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 37/226 (16%)
Query: 63 IAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKML----ENSKFSAEEFINEVSTIGRIH 118
IA T +G+G FG V++G+ + G +AVK+ E S F E V +
Sbjct: 4 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LR 58
Query: 119 HVNVVQLLGFCSEGSKRA-------LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVAL 171
H N+ LGF + +K LV +Y +GSL F +R ++ E + ++AL
Sbjct: 59 HENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLAL 110
Query: 172 GTARGIEYLH-----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 226
TA G+ +LH I H D+K NIL+ N ++D GLA H D + I
Sbjct: 111 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 170
Query: 227 SATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 265
+ GT Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 171 APNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 24/205 (11%)
Query: 71 HKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 128
K+GQG G+VY + TG +A++ + + +E I NE+ + + N+V L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFP---KESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
G + +V EY+ GSL V E + ++C E L + +E+LH+
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL--------QALEFLHSNQ- 137
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISATRGTIGYIAPELISRN 244
++H DIK NILL + K++DFG A+ P+++ S GT ++APE+++R
Sbjct: 138 --VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVGTPYWMAPEVVTRK 192
Query: 245 -FGTVSCKSDVYGFGMVLLEMAGGR 268
+G K D++ G++ +EM G
Sbjct: 193 AYGP---KVDIWSLGIMAIEMIEGE 214
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 30/206 (14%)
Query: 72 KLGQGGFGSVYKGQLQTGG-LIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 129
K+G+G G V +++ G L+AVK ++ K E + NEV + H NVV++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 130 SEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G + +V E++ G+L H E + ++C L +++ A+G+
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGV--------- 141
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELIS 242
+H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELIS
Sbjct: 142 --IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELIS 193
Query: 243 R-NFGTVSCKSDVYGFGMVLLEMAGG 267
R +G + D++ G++++EM G
Sbjct: 194 RLPYGP---EVDIWSLGIMVIEMVDG 216
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 73 LGQGGFGSVYKGQL-----QTG-GLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQ 124
LG+G FG V K + G +AVKML+ + +E + ++E + + +++H +V++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG----------------------QSLC 162
L G CS+ L+ EY GSL F +ESR ++L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSL--RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 163 WEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222
L A ++G++YL ++ ++H D+ NIL+ K+SDFGL++ +E+
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
V S R + ++A E + + T +SDV+ FG++L E+
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYT--TQSDVWSFGVLLWEIV 246
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 24/205 (11%)
Query: 71 HKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 128
K+GQG G+VY + TG +A++ + + +E I NE+ + + N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFP---KESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
G + +V EY+ GSL V E + ++C E L + +E+LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL--------QALEFLHSNQ- 136
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISATRGTIGYIAPELISRN 244
++H DIK NILL + K++DFG A+ P+++ S GT ++APE+++R
Sbjct: 137 --VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SEMVGTPYWMAPEVVTRK 191
Query: 245 -FGTVSCKSDVYGFGMVLLEMAGGR 268
+G K D++ G++ +EM G
Sbjct: 192 AYGP---KVDIWSLGIMAIEMIEGE 213
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 72 KLGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSA-------EEFINEVSTIGRIHHVNVV 123
+LG G F V K Q TG A K ++ + S+ EE EV+ + I H N++
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
L + L+ E + G L + KES + + L ++ G+ YLH+
Sbjct: 72 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----LDGVHYLHSK 127
Query: 184 CDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 239
I HFD+KP NI+L +P K+ DFG+A N+F +I GT ++APE
Sbjct: 128 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPE 181
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEMAGG 267
++ N+ + ++D++ G++ + G
Sbjct: 182 IV--NYEPLGLEADMWSIGVITYILLSG 207
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 24/205 (11%)
Query: 71 HKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 128
K+GQG G+VY + TG +A++ + + +E I NE+ + + N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFP---KESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
G + +V EY+ GSL V E + ++C E L + +E+LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL--------QALEFLHSNQ- 136
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISATRGTIGYIAPELISRN 244
++H DIK NILL + K++DFG A+ P+++ S GT ++APE+++R
Sbjct: 137 --VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVGTPYWMAPEVVTRK 191
Query: 245 -FGTVSCKSDVYGFGMVLLEMAGGR 268
+G K D++ G++ +EM G
Sbjct: 192 AYGP---KVDIWSLGIMAIEMIEGE 213
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 23/213 (10%)
Query: 69 FTHKLGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 120
+ +LGQG FG VY+G + + +A+K + + E EF+NE S + +
Sbjct: 16 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLC---WEKLHEVALGTA 174
+VV+LLG S+G ++ E M G L R + P+ L K+ ++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--T 232
G+ YL+ +H D+ N + +F K+ DFG+ + E D+ +G
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR-DIYETDYYR-KGGKGLLP 190
Query: 233 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
+ +++PE S G + SDV+ FG+VL E+A
Sbjct: 191 VRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 72 KLGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSA-------EEFINEVSTIGRIHHVNVV 123
+LG G F V K Q TG A K ++ + S+ EE EV+ + I H N++
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
L + L+ E + G L + KES + + L ++ G+ YLH+
Sbjct: 79 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----LDGVHYLHSK 134
Query: 184 CDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 239
I HFD+KP NI+L +P K+ DFG+A N+F +I GT ++APE
Sbjct: 135 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPE 188
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEMAGG 267
++ N+ + ++D++ G++ + G
Sbjct: 189 IV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 31/214 (14%)
Query: 72 KLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVV 123
+LGQG FG VY+G + +AVK + S E EF+NE S + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHE---VALGTARGI 177
+LLG S+G +V E M +G L R + P+ L E +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 178 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG------ 231
YL+ +H D+ N ++ H+F K+ DFG+ + D + R
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR------DIYETAYYRKGGKGLL 194
Query: 232 TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265
+ ++APE S G + SD++ FG+VL E+
Sbjct: 195 PVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 30/206 (14%)
Query: 72 KLGQGGFGSVYKGQLQTGG-LIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 129
K+G+G G V +++ G L+AVK ++ K E + NEV + H NVV++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 130 SEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G + +V E++ G+L H E + ++C L +++ A+G+
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGV--------- 268
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELIS 242
+H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELIS
Sbjct: 269 --IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELIS 320
Query: 243 R-NFGTVSCKSDVYGFGMVLLEMAGG 267
R +G + D++ G++++EM G
Sbjct: 321 RLPYGP---EVDIWSLGIMVIEMVDG 343
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 35/234 (14%)
Query: 73 LGQGGFGSVY----KGQLQTGGLIAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQL 125
LGQG FG V+ + +G L A+K+L+ + + + E + ++H VV+L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 126 -LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
F +EG K L+ +++ G L F + S+ E + A G+++LH+
Sbjct: 96 HYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALGLDHLHS-- 148
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAK----FHPKENDFVSISATRGTIGYIAPEL 240
+ I++ D+KP NILLD K++DFGL+K K F GT+ Y+APE+
Sbjct: 149 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC------GTVEYMAPEV 201
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM-------AGGRRNSNMNATRSSKAYFPSWV 287
++R S +D + +G+++ EM G R M +K P ++
Sbjct: 202 VNRQ--GHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFL 253
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 149
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ +A GT Y++PEL++
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 207 K---SACKSSDLWALGCIIYQLVAG 228
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 30/206 (14%)
Query: 72 KLGQGGFGSVYKGQLQTGG-LIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 129
K+G+G G V +++ G L+AVK ++ K E + NEV + H NVV++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 130 SEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G + +V E++ G+L H E + ++C L +++ A+G+
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGV--------- 191
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELIS 242
+H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELIS
Sbjct: 192 --IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELIS 243
Query: 243 R-NFGTVSCKSDVYGFGMVLLEMAGG 267
R +G + D++ G++++EM G
Sbjct: 244 RLPYGP---EVDIWSLGIMVIEMVDG 266
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 105/199 (52%), Gaps = 17/199 (8%)
Query: 72 KLGQGGFGSVYKG--QLQTGGL-IAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+LG G FGSV +G +++ + +A+K+L+ K EE + E + ++ + +V+L+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPK-ESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
G C + LV E G L + + K E S E LH+V++G ++YL +
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG----MKYLE---E 454
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 244
+H ++ N+LL + K+SDFGL+K ++ + + SA + + + APE I N
Sbjct: 455 KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI--N 512
Query: 245 FGTVSCKSDVYGFGMVLLE 263
F S +SDV+ +G+ + E
Sbjct: 513 FRKFSSRSDVWSYGVTMWE 531
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 56 RYSYPQIIAMTNHFTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEE--FINEVS 112
R+ + I F LG G F V + +T L+A+K + +E NE++
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 113 TIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL-DRHV---FPKESRGQSLCWEKLHE 168
+ +I H N+V L G L+ + + G L DR V F E L ++ L
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD- 127
Query: 169 VALGTARGIEYLHNGCDVCILHFDIKPHNIL---LDHNFIPKVSDFGLAKFHPKENDFVS 225
++YLH D+ I+H D+KP N+L LD + +SDFGL+K E+
Sbjct: 128 -------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 226 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 260
+S GT GY+APE++++ S D + G++
Sbjct: 175 LSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 53/244 (21%)
Query: 56 RYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIG 115
+Y+ + M +G GGFG V+K + + G V + K++ E+ EV +
Sbjct: 3 KYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYV--IRRVKYNNEKAEREVKALA 60
Query: 116 RIHHVNVVQLLGFCSEGSKRALVYEYMP---NGSLDRHVFPKE-----SRGQSLC----- 162
++ HVN+V G C +G ++Y P + SL+ + E SR ++ C
Sbjct: 61 KLDHVNIVHYNG-CWDG------FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQM 113
Query: 163 ----------W------EKLHEV-AL----GTARGIEYLHNGCDVCILHFDIKPHNILLD 201
W EKL +V AL +G++Y+H+ ++H D+KP NI L
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LIHRDLKPSNIFLV 170
Query: 202 HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMV 260
K+ DFGL +ND + ++GT+ Y++PE I S+++G + D+Y G++
Sbjct: 171 DTKQVKIGDFGLVT--SLKNDGKR-TRSKGTLRYMSPEQISSQDYGK---EVDLYALGLI 224
Query: 261 LLEM 264
L E+
Sbjct: 225 LAEL 228
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 20/211 (9%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKML----ENSKFSAEEFINEVSTIGRIHHVNVVQLL 126
++G G FG+VY + ++ ++A+K + + S ++ I EV + ++ H N +Q
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G LV EY + D E + L ++ V G +G+ YLH+
Sbjct: 121 GCYLREHTAWLVMEYCLGSASDL----LEVHKKPLQEVEIAAVTHGALQGLAYLHSHN-- 174
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNF 245
++H D+K NILL + K+ DFG A N FV GT ++APE+I + +
Sbjct: 175 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVILAMDE 227
Query: 246 GTVSCKSDVYGFGMVLLEMAGGRRNS-NMNA 275
G K DV+ G+ +E+A + NMNA
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPPLFNMNA 258
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 20/211 (9%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKML----ENSKFSAEEFINEVSTIGRIHHVNVVQLL 126
++G G FG+VY + ++ ++A+K + + S ++ I EV + ++ H N +Q
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G LV EY + D E + L ++ V G +G+ YLH+
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDL----LEVHKKPLQEVEIAAVTHGALQGLAYLHSHN-- 135
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNF 245
++H D+K NILL + K+ DFG A N FV GT ++APE+I + +
Sbjct: 136 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVILAMDE 188
Query: 246 GTVSCKSDVYGFGMVLLEMAGGRRNS-NMNA 275
G K DV+ G+ +E+A + NMNA
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNA 219
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 56 RYSYPQIIAMTNHFTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEE--FINEVS 112
R+ + I F LG G F V + +T L+A+K + +E NE++
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 113 TIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL-DRHV---FPKESRGQSLCWEKLHE 168
+ +I H N+V L G L+ + + G L DR V F E L ++ L
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD- 127
Query: 169 VALGTARGIEYLHNGCDVCILHFDIKPHNIL---LDHNFIPKVSDFGLAKFHPKENDFVS 225
++YLH D+ I+H D+KP N+L LD + +SDFGL+K E+
Sbjct: 128 -------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 226 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 260
+S GT GY+APE++++ S D + G++
Sbjct: 175 LSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 124
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P +A GT+ Y+ PE+I
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMIEG 180
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 181 RMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 32/210 (15%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEG 132
+G GGFG V+K + + G V ++ K++ E+ EV + ++ HVN+V G C +G
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYV--IKRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWDG 75
Query: 133 --------------SKRALVY---EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR 175
SK ++ E+ G+L++ + ++ RG+ L E+ +
Sbjct: 76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITK 133
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGY 235
G++Y+H+ +++ D+KP NI L K+ DFGL +ND ++GT+ Y
Sbjct: 134 GVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVT--SLKNDGKR-XRSKGTLRY 187
Query: 236 IAPELI-SRNFGTVSCKSDVYGFGMVLLEM 264
++PE I S+++G + D+Y G++L E+
Sbjct: 188 MSPEQISSQDYGK---EVDLYALGLILAEL 214
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 69 FTHKLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSA--EEFINEVSTIGRIHHV 120
F +LG+ FG VYKG L + +A+K L++ EEF +E R+ H
Sbjct: 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 89
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPK----------ESRGQSLCWEK---LH 167
NVV LLG ++ ++++ Y +G L + + + R E +H
Sbjct: 90 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 168 EVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227
VA A G+EYL + ++H D+ N+L+ K+SD GL + + + +
Sbjct: 150 LVA-QIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 205
Query: 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I ++APE I +G S SD++ +G+VL E+
Sbjct: 206 NSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEV 240
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 35/226 (15%)
Query: 68 HFTHKLGQGGFGSVYK------GQLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-H 118
F LG G FG V + G+ +AVKML+++ + E+ ++E+ + +
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 93
Query: 119 HVNVVQLLGFCSEGSKRALVYEYMPNGSL--------------------DRHVFPKESRG 158
H N+V LLG C+ G ++ EY G L D KE G
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKED-G 152
Query: 159 QSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218
+ L L + A+G+ +L CI H D+ N+LL + + K+ DFGLA+
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+++++ R + ++APE I TV +SDV+ +G++L E+
Sbjct: 210 NDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 253
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 70 THKLGQGGFGSVYKGQLQTG-GLIAVKMLENSKFSA--------------EEFINEVSTI 114
KLG G +G V + + G A+K+++ S+F EE NE+S +
Sbjct: 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL 100
Query: 115 GRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTA 174
+ H N+++L + LV E+ G L + + + + ++
Sbjct: 101 KSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI----L 156
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHN---FIPKVSDFGLAKFHPKENDFVSISATRG 231
GI YLH I+H DIKP NILL++ K+ DFGL+ F K+ + G
Sbjct: 157 SGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRDRLG 210
Query: 232 TIGYIAPELISRNFGTVSCKSDVYGFGMVL 261
T YIAPE++ + + K DV+ G+++
Sbjct: 211 TAYYIAPEVLKKKYNE---KCDVWSCGVIM 237
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + K SR TA I L N C
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQ----------RTATYITELANALSYC 128
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL N K++DFG + P + GT+ Y+ PE+I
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 184
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGG 267
K D++ G++ E G
Sbjct: 185 RMH--DEKVDLWSLGVLCYEFLVG 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 127
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P +A GT+ Y+ PE+I
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMIEG 183
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 184 RMHDE--KVDLWSLGVLCYEFLVGK 206
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 72 KLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSA-------EEFINEVSTIGRIHHVNVV 123
+LG G F V K + ++ GL A K ++ + A EE EVS + ++ H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
L + L+ E + G L F ++ +SL E+ G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 184 CDVCILHFDIKPHNI-LLDHNF-IP--KVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 239
I HFD+KP NI LLD N IP K+ DFGLA H E D V GT ++APE
Sbjct: 135 K---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFGTPEFVAPE 188
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEMAGG 267
++ N+ + ++D++ G++ + G
Sbjct: 189 IV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNVV 123
+LG G F V K + ++ GL A K ++ + S EE EVS + ++ H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
L + L+ E + G L F ++ +SL E+ G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 184 CDVCILHFDIKPHNI-LLDHNF-IP--KVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 239
I HFD+KP NI LLD N IP K+ DFGLA H E D V GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFGTPEFVAPE 188
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYD 289
++ N+ + ++D++ G++ + G + + + A S YD
Sbjct: 189 IV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 56 RYSYPQIIAMTNHFTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEE--FINEVS 112
R+ + I F LG G F V + +T L+A+K + +E NE++
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 113 TIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL-DRHV---FPKESRGQSLCWEKLHE 168
+ +I H N+V L G L+ + + G L DR V F E L ++ L
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD- 127
Query: 169 VALGTARGIEYLHNGCDVCILHFDIKPHNIL---LDHNFIPKVSDFGLAKFHPKENDFVS 225
++YLH D+ I+H D+KP N+L LD + +SDFGL+K E+
Sbjct: 128 -------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 226 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 260
+S GT GY+APE++++ S D + G++
Sbjct: 175 LSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNVV 123
+LG G F V K + ++ GL A K ++ + S EE EVS + ++ H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
L + L+ E + G L F ++ +SL E+ G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 184 CDVCILHFDIKPHNI-LLDHNF-IP--KVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 239
I HFD+KP NI LLD N IP K+ DFGLA H E D V GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFGTPEFVAPE 188
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYD 289
++ N+ + ++D++ G++ + G + + + A S YD
Sbjct: 189 IV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 72 KLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNVV 123
+LG G F V K + ++ GL A K ++ + S EE EVS + ++ H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
L + L+ E + G L F ++ +SL E+ G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 184 CDVCILHFDIKPHNI-LLDHNF-IP--KVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 239
I HFD+KP NI LLD N IP K+ DFGLA H E D V GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFGTPEFVAPE 188
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEMAGG 267
++ N+ + ++D++ G++ + G
Sbjct: 189 IV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNVV 123
+LG G F V K + ++ GL A K ++ + S EE EVS + ++ H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
L + L+ E + G L F ++ +SL E+ G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 184 CDVCILHFDIKPHNI-LLDHNF-IP--KVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 239
I HFD+KP NI LLD N IP K+ DFGLA H E D V GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFGTPEFVAPE 188
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYD 289
++ N+ + ++D++ G++ + G + + + A S YD
Sbjct: 189 IV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 56 RYSYPQIIAMTNHFTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEE--FINEVS 112
R+ + I F LG G F V + +T L+A+K + +E NE++
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIA 68
Query: 113 TIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL-DRHV---FPKESRGQSLCWEKLHE 168
+ +I H N+V L G L+ + + G L DR V F E L ++ L
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD- 127
Query: 169 VALGTARGIEYLHNGCDVCILHFDIKPHNIL---LDHNFIPKVSDFGLAKFHPKENDFVS 225
++YLH D+ I+H D+KP N+L LD + +SDFGL+K E+
Sbjct: 128 -------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 226 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 260
+S GT GY+APE++++ S D + G++
Sbjct: 175 LSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 24/209 (11%)
Query: 71 HKLGQGGFGSVYK-GQLQTGGLIAVKMLENSKF-------SAEEFINEVSTIGRIHHVNV 122
+LG G F V K Q TG A K ++ + S EE EV+ + I H N+
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNI 91
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+ L + L+ E + G L + KES + + L ++ G+ YLH+
Sbjct: 92 ITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----LDGVHYLHS 147
Query: 183 GCDVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
I HFD+KP NI+L +P K+ DFG+A N+F +I GT ++AP
Sbjct: 148 K---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAP 201
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ N+ + ++D++ G++ + G
Sbjct: 202 EIV--NYEPLGLEADMWSIGVITYILLSG 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 72 KLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVV 123
+LGQG FG VY+G + +AVK + S E EF+NE S + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHE---VALGTARGI 177
+LLG S+G +V E M +G L R + P+ L E +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 178 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
YL+ +H ++ N ++ H+F K+ DFG+ + + + + + ++A
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEMA 265
PE S G + SD++ FG+VL E+
Sbjct: 201 PE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 72 KLGQGGFGSVYKGQLQTGGL-IAVKMLENSK-------FSAEEFINEVSTIGRIHHVNVV 123
+LG G F V K + ++ GL A K ++ + S EE EVS + ++ H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
L + L+ E + G L F ++ +SL E+ G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 184 CDVCILHFDIKPHNI-LLDHNF-IP--KVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 239
I HFD+KP NI LLD N IP K+ DFGLA H E D V GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFGTPEFVAPE 188
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEMAGG 267
++ N+ + ++D++ G++ + G
Sbjct: 189 IV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 27/207 (13%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE------FINEVSTIGRIHHVNVVQL 125
K+G+G +G VYK + G ++A+K + + AE+ I E+S + +HH N+V L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRI---RLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+ LV+E+M + V + G K++ L RG+ + H
Sbjct: 85 IDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYLYQL--LRGVAHCHQHR- 139
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELI-- 241
ILH D+KP N+L++ + K++DFGLA+ P S + T+ Y AP+++
Sbjct: 140 --ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR----SYTHEVVTLWYRAPDVLMG 193
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGGR 268
S+ + T D++ G + EM G+
Sbjct: 194 SKKYST---SVDIWSIGCIFAEMITGK 217
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 69 FTHKLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSA--EEFINEVSTIGRIHHV 120
F +LG+ FG VYKG L + +A+K L++ EEF +E R+ H
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPK----------ESRGQSLCWEK---LH 167
NVV LLG ++ ++++ Y +G L + + + R E +H
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 168 EVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227
VA A G+EYL + ++H D+ N+L+ K+SD GL + + + +
Sbjct: 133 LVA-QIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ I ++APE I +G S SD++ +G+VL E+
Sbjct: 189 NSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEV 223
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 72 KLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVV 123
+LGQG FG VY+G + +AVK + S E EF+NE S + +VV
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLD---RHVFPKESRGQSLCWEKLHE---VALGTARGI 177
+LLG S+G +V E M +G L R + P+ L E +A A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 178 EYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
YL+ +H ++ N ++ H+F K+ DFG+ + + + + + ++A
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEMA 265
PE S G + SD++ FG+VL E+
Sbjct: 202 PE--SLKDGVFTTSSDMWSFGVVLWEIT 227
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 27/207 (13%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE------FINEVSTIGRIHHVNVVQL 125
K+G+G +G VYK + G ++A+K + + AE+ I E+S + +HH N+V L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRI---RLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+ LV+E+M + V + G K++ L RG+ + H
Sbjct: 85 IDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYLYQL--LRGVAHCHQHR- 139
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELI-- 241
ILH D+KP N+L++ + K++DFGLA+ P S + T+ Y AP+++
Sbjct: 140 --ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR----SYTHEVVTLWYRAPDVLMG 193
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGGR 268
S+ + T D++ G + EM G+
Sbjct: 194 SKKYST---SVDIWSIGCIFAEMITGK 217
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 132/283 (46%), Gaps = 31/283 (10%)
Query: 73 LGQGGFGSVY-----KGQLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRIHHVNVVQL 125
LG+G FG V TG ++AVK L+ + E+ + ++H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 126 LGFCSEGSKRAL--VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
G C + +++L V EY+P GSL R P+ S G + +L A G+ YLH+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSL-RDYLPRHSIGLA----QLLLFAQQICEGMAYLHSQ 136
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPELIS 242
+H ++ N+LLD++ + K+ DFGLAK P+ +++ + + + + APE +
Sbjct: 137 H---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302
SDV+ FG+ L E+ ++ ++++S F + + L L +
Sbjct: 194 EY--KFYYASDVWSFGVTLYELL-----THCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 246
Query: 303 TEIESMIAR-KLCMIGLW-----CIQVKAADRPSMTKVLEMLE 339
E + R C ++ C + +A+ RP+ ++ +L+
Sbjct: 247 LERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 35/234 (14%)
Query: 73 LGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQL 125
LGQG FG V+ + +G L A+K+L+ + + + E + ++H +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 126 -LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
F +EG K L+ +++ G L F + S+ E + A +++LH+
Sbjct: 92 HYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLHS-- 144
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAK----FHPKENDFVSISATRGTIGYIAPEL 240
+ I++ D+KP NILLD K++DFGL+K K F GT+ Y+APE+
Sbjct: 145 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTVEYMAPEV 197
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM-------AGGRRNSNMNATRSSKAYFPSWV 287
++R T S +D + FG+++ EM G R M +K P ++
Sbjct: 198 VNRRGHTQS--ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 249
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 35/234 (14%)
Query: 73 LGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQL 125
LGQG FG V+ + +G L A+K+L+ + + + E + ++H +V+L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 126 -LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
F +EG K L+ +++ G L F + S+ E + A +++LH+
Sbjct: 93 HYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLHS-- 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAK----FHPKENDFVSISATRGTIGYIAPEL 240
+ I++ D+KP NILLD K++DFGL+K K F GT+ Y+APE+
Sbjct: 146 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTVEYMAPEV 198
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM-------AGGRRNSNMNATRSSKAYFPSWV 287
++R T S +D + FG+++ EM G R M +K P ++
Sbjct: 199 VNRRGHTQS--ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 250
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 35/234 (14%)
Query: 73 LGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQL 125
LGQG FG V+ + +G L A+K+L+ + + + E + ++H +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 126 -LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
F +EG K L+ +++ G L F + S+ E + A +++LH+
Sbjct: 92 HYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLHS-- 144
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAK----FHPKENDFVSISATRGTIGYIAPEL 240
+ I++ D+KP NILLD K++DFGL+K K F GT+ Y+APE+
Sbjct: 145 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTVEYMAPEV 197
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM-------AGGRRNSNMNATRSSKAYFPSWV 287
++R T S +D + FG+++ EM G R M +K P ++
Sbjct: 198 VNRRGHTQS--ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 249
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVVQLLG 127
LG G FG V G+ + TG +AVK+L K + + + E+ + H ++++L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
S S +V EY+ G L ++ K R +L + L G++Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYIC-KNGRLDEKESRRLFQQILS---GVDYCHRHM--- 136
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
++H D+KP N+LLD + K++DFGL+ + +F+ S G+ Y APE+IS
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRXSC--GSPNYAAPEVISGRL-Y 192
Query: 248 VSCKSDVYGFGMVLLEMAGG 267
+ D++ G++L + G
Sbjct: 193 AGPEVDIWSSGVILYALLCG 212
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 24/205 (11%)
Query: 71 HKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 128
K+GQG G+VY + TG +A++ + + +E I NE+ + + N+V L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFP---KESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
G + +V EY+ GSL V E + ++C E L + +E+LH+
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL--------QALEFLHSN-- 136
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISATRGTIGYIAPELISRN 244
++H +IK NILL + K++DFG A+ P+++ S GT ++APE+++R
Sbjct: 137 -QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPEVVTRK 192
Query: 245 -FGTVSCKSDVYGFGMVLLEMAGGR 268
+G K D++ G++ +EM G
Sbjct: 193 AYGP---KVDIWSLGIMAIEMIEGE 214
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVV 123
KLG G FG V +G+ +AVK L+ S E FI EV+ + + H N++
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 124 QLLGFCSEGSKRALVYEYMPNGSL-DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+L G + +V E P GSL DR ++ +G L L A+ A G+ YL +
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLL-GTLSRYAVQVAEGMGYLES 133
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPE-L 240
+H D+ N+LL + K+ DFGL + P+ +D + R + APE L
Sbjct: 134 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM 264
+R F S SD + FG+ L EM
Sbjct: 191 KTRTF---SHASDTWMFGVTLWEM 211
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 30/207 (14%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 150
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHP--KENDFVSISATRGTIGYIAPELI 241
++H DIKP N+LL K++DFG + P + +D GT+ Y+ PE+I
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC------GTLDYLPPEMI 204
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 205 EGRMHDE--KVDLWSLGVLCYEFLVGK 229
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVV 123
KLG G FG V +G+ +AVK L+ S E FI EV+ + + H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 124 QLLGFCSEGSKRALVYEYMPNGSL-DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+L G + +V E P GSL DR ++ +G L L A+ A G+ YL +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLL-GTLSRYAVQVAEGMGYLES 129
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPE-L 240
+H D+ N+LL + K+ DFGL + P+ +D + R + APE L
Sbjct: 130 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM 264
+R F S SD + FG+ L EM
Sbjct: 187 KTRTF---SHASDTWMFGVTLWEM 207
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 125
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR----TTLSGTLDYLPPEMIEG 181
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 182 RMH--DEKVDLWSLGVLCYEFLVGK 204
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 26/204 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + K SR TA I L N C
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQ----------RTATYITELANALSYC 128
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL N K++DFG + P GT+ Y+ PE+I
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIEG 184
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGG 267
K D++ G++ E G
Sbjct: 185 RMH--DEKVDLWSLGVLCYEFLVG 206
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+LG G G V K Q + GLI + L E + I E+ + + +V G
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 82
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
+ ++ E+M GSLD+ + KE++ + E L +V++ RG+ YL I
Sbjct: 83 FYSDGEISICMEHMDGGSLDQVL--KEAK--RIPEEILGKVSIAVLRGLAYLREKHQ--I 136
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H D+KP NIL++ K+ DFG++ N FV GT Y+APE R G
Sbjct: 137 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMAPE---RLQG 187
Query: 247 T-VSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYD 289
T S +SD++ G+ L+E+A GR + +A F V D
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVD 231
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVVQLLG 127
LG G FG V G+ Q TG +AVK+L K + + + E+ + H ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
S + +V EY+ G L ++ K R + + +L + L ++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYIC-KHGRVEEMEARRLFQQILS---AVDYCHRHM--- 131
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
++H D+KP N+LLD + K++DFGL+ + +F+ S G+ Y APE+IS
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTSC--GSPNYAAPEVISGRL-Y 187
Query: 248 VSCKSDVYGFGMVLLEMAGG 267
+ D++ G++L + G
Sbjct: 188 AGPEVDIWSCGVILYALLCG 207
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 148
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ ++ GT Y++PEL++
Sbjct: 149 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 206 K---SACKSSDLWALGCIIYQLVAG 227
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVV 123
KLG G FG V +G+ +AVK L+ S E FI EV+ + + H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 124 QLLGFCSEGSKRALVYEYMPNGSL-DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+L G + +V E P GSL DR ++ +G L L A+ A G+ YL +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLL-GTLSRYAVQVAEGMGYLES 129
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPE-L 240
+H D+ N+LL + K+ DFGL + P+ +D + R + APE L
Sbjct: 130 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM 264
+R F S SD + FG+ L EM
Sbjct: 187 KTRTF---SHASDTWMFGVTLWEM 207
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ ++ GT Y++PEL++
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGG 267
+ S SD++ G ++ ++ G
Sbjct: 209 K--SASKSSDLWALGCIIYQLVAG 230
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVV 123
KLG G FG V +G+ +AVK L+ S E FI EV+ + + H N++
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 124 QLLGFCSEGSKRALVYEYMPNGSL-DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+L G + +V E P GSL DR ++ +G L L A+ A G+ YL +
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLL-GTLSRYAVQVAEGMGYLES 133
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPE-L 240
+H D+ N+LL + K+ DFGL + P+ +D + R + APE L
Sbjct: 134 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM 264
+R F S SD + FG+ L EM
Sbjct: 191 KTRTF---SHASDTWMFGVTLWEM 211
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 152
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ ++ GT Y++PEL++
Sbjct: 153 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 210 K---SACKSSDLWALGCIIYQLVAG 231
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 30/218 (13%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 127
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHP--KENDFVSISATRGTIGYIAPELI 241
++H DIKP N+LL K++DFG + P + +D GT+ Y+ PE+I
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC------GTLDYLPPEMI 181
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSS 279
K D++ G++ E G+ N + +
Sbjct: 182 EGRMH--DEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVV 123
KLG G FG V +G+ +AVK L+ S E FI EV+ + + H N++
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 124 QLLGFCSEGSKRALVYEYMPNGSL-DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+L G + +V E P GSL DR ++ +G L L A+ A G+ YL +
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLL-GTLSRYAVQVAEGMGYLES 139
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPE-L 240
+H D+ N+LL + K+ DFGL + P+ +D + R + APE L
Sbjct: 140 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 196
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM 264
+R F S SD + FG+ L EM
Sbjct: 197 KTRTF---SHASDTWMFGVTLWEM 217
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVV 123
KLG G FG V +G+ +AVK L+ S E FI EV+ + + H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 124 QLLGFCSEGSKRALVYEYMPNGSL-DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+L G + +V E P GSL DR ++ +G L L A+ A G+ YL +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLL-GTLSRYAVQVAEGMGYLES 129
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPE-L 240
+H D+ N+LL + K+ DFGL + P+ +D + R + APE L
Sbjct: 130 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM 264
+R F S SD + FG+ L EM
Sbjct: 187 KTRTF---SHASDTWMFGVTLWEM 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 30/207 (14%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 125
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHP--KENDFVSISATRGTIGYIAPELI 241
++H DIKP N+LL K++DFG + P + D GT+ Y+ PE+I
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMI 179
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 180 EGRMHDE--KVDLWSLGVLCYEFLVGK 204
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 72 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 127
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 128 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 185 K---SACKSSDLWALGCIIYQLVAG 206
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 73 LGQGGFGSVY-----KGQLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRIHHVNVVQL 125
LG+G FG V TG ++AVK L+ + E+ + ++H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 126 LGFCSEGSKRAL--VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
G C + +++L V EY+P GSL R P+ S G + +L A G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSL-RDYLPRHSIGLA----QLLLFAQQICEGMAYLHAQ 136
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPELIS 242
+H ++ N+LLD++ + K+ DFGLAK P+ +++ + + + + APE +
Sbjct: 137 H---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 243 RNFGTVSCKSDVYGFGMVLLEM 264
SDV+ FG+ L E+
Sbjct: 194 EY--KFYYASDVWSFGVTLYEL 213
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 127
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 183
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 184 RMHDE--KVDLWSLGVLCYEFLVGK 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 127
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 183
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 184 RMH--DEKVDLWSLGVLCYEFLVGK 206
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVV 123
KLG G FG V +G+ +AVK L+ S E FI EV+ + + H N++
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 124 QLLGFCSEGSKRALVYEYMPNGSL-DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+L G + +V E P GSL DR ++ +G L L A+ A G+ YL +
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLL-GTLSRYAVQVAEGMGYLES 139
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPE-L 240
+H D+ N+LL + K+ DFGL + P+ +D + R + APE L
Sbjct: 140 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM 264
+R F S SD + FG+ L EM
Sbjct: 197 KTRTF---SHASDTWMFGVTLWEM 217
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 75 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 123
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 124 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 179
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 180 RMH--DEKVDLWSLGVLCYEFLVGK 202
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 30/207 (14%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 124
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHP--KENDFVSISATRGTIGYIAPELI 241
++H DIKP N+LL K++DFG + P + D GT+ Y+ PE+I
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMI 178
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 179 EGRMHDE--KVDLWSLGVLCYEFLVGK 203
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 11 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 70
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 71 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 126
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 127 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 184 K---SACKSSDLWALGCIIYQLVAG 205
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 93 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 141
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 142 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 197
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 198 RMHDE--KVDLWSLGVLCYEFLVGK 220
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 13 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 72
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 73 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 128
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 129 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 186 K---SACKSSDLWALGCIIYQLVAG 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 14 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 73
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 74 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 129
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 130 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 187 K---SACKSSDLWALGCIIYQLVAG 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKGQLQTGGLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 124
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P +A GT+ Y+ PE+I
Sbjct: 125 HSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMIEG 180
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 181 RMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 22/205 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGL-IAVKMLE-----NSKFSAEEFINEVSTIGRIHHVNVVQL 125
K+G+G F VY+ G+ +A+K ++ ++K A+ I E+ + +++H NV++
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD-CIKEIDLLKQLNHPNVIKY 97
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHV--FPKESR--GQSLCWEKLHEVALGTARGIEYLH 181
E ++ +V E G L R + F K+ R + W+ V L +A +E++H
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF--VQLCSA--LEHMH 153
Query: 182 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 241
+ ++H DIKP N+ + + K+ D GL +F + + + GT Y++PE I
Sbjct: 154 SRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERI 208
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAG 266
N + KSD++ G +L EMA
Sbjct: 209 HEN--GYNFKSDIWSLGCLLYEMAA 231
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 129
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 185
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 186 RMHDE--KVDLWSLGVLCYEFLVGK 208
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 132/294 (44%), Gaps = 39/294 (13%)
Query: 73 LGQGGFGSVY-----KGQLQTGGLIAVKMLENSKFSA--EEFINEVSTIGRIHHVNVVQL 125
LG+G FG V TG ++AVK L+ + E+ + ++H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 126 LGFCSEGSKRA--LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
G C + +++ LV EY+P GSL R P+ G + +L A G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSL-RDYLPRHCVGLA----QLLLFAQQICEGMAYLHAQ 130
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPELIS 242
+H + N+LLD++ + K+ DFGLAK P+ +++ + + + + APE +
Sbjct: 131 H---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 243 RNFGTVSCK----SDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
CK SDV+ FG+ L E+ + ++ +S F + + L
Sbjct: 188 ------ECKFYYASDVWSFGVTLYELL-----TYCDSNQSPHTKFTELIGHTQGQMTVLR 236
Query: 299 LQNVTEIESMIAR-KLCMIGLW-----CIQVKAADRPSMTKVLEMLEGSIDDLQ 346
L + E + R C ++ C + +A+ RP+ ++ +L+ + + Q
Sbjct: 237 LTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 290
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 148
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 149 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 206 K---SACKSSDLWALGCIIYQLVAG 227
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 30/207 (14%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 124
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHP--KENDFVSISATRGTIGYIAPELI 241
++H DIKP N+LL K++DFG + P + D GT+ Y+ PE+I
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMI 178
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 179 EGRMHDE--KVDLWSLGVLCYEFLVGK 203
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 132/294 (44%), Gaps = 39/294 (13%)
Query: 73 LGQGGFGSVY-----KGQLQTGGLIAVKMLENSKFSA--EEFINEVSTIGRIHHVNVVQL 125
LG+G FG V TG ++AVK L+ + E+ + ++H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 126 LGFCSEGSKRA--LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
G C + +++ LV EY+P GSL R P+ G + +L A G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSL-RDYLPRHCVGLA----QLLLFAQQICEGMAYLHAQ 131
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPELIS 242
+H + N+LLD++ + K+ DFGLAK P+ +++ + + + + APE +
Sbjct: 132 H---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 243 RNFGTVSCK----SDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298
CK SDV+ FG+ L E+ + ++ +S F + + L
Sbjct: 189 ------ECKFYYASDVWSFGVTLYELL-----TYCDSNQSPHTKFTELIGHTQGQMTVLR 237
Query: 299 LQNVTEIESMIAR-KLCMIGLW-----CIQVKAADRPSMTKVLEMLEGSIDDLQ 346
L + E + R C ++ C + +A+ RP+ ++ +L+ + + Q
Sbjct: 238 LTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 291
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 18 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 77
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 78 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 133
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 134 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 191 K---SACKSSDLWALGCIIYQLVAG 212
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 128
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 129 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 184
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 185 RMH--DEKVDLWSLGVLCYEFLVGK 207
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 22/202 (10%)
Query: 72 KLGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 129
K+G+G G V + +G +AVKM++ K E + NEV + H NVV++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
G + ++ E++ G+L V + R L E++ V + + YLH ++
Sbjct: 112 LVGEELWVLMEFLQGGALTDIV--SQVR---LNEEQIATVCEAVLQALAYLHAQG---VI 163
Query: 190 HFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
H DIK +ILL + K+SDFG ++K PK V GT ++APE+ISR+
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV------GTPYWMAPEVISRSL 217
Query: 246 GTVSCKSDVYGFGMVLLEMAGG 267
+ + D++ G++++EM G
Sbjct: 218 --YATEVDIWSLGIMVIEMVDG 237
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 30/207 (14%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 129
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHP--KENDFVSISATRGTIGYIAPELI 241
++H DIKP N+LL K++DFG + P + D GT+ Y+ PE+I
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMI 183
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 184 EGRMHDE--KVDLWSLGVLCYEFLVGK 208
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 209 K---SACKSSDLWALGCIIYQLVAG 230
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 124
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 180
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 181 RMHDE--KVDLWSLGVLCYEFLVGK 203
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 149
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 207 K---SACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 209 K---SACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 149
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 207 K---SACKSSDLWALGCIIYQLVAG 228
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 150
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 206
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 207 RMHDE--KVDLWSLGVLCYEFLVGK 229
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 209 K---SACKSSDLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGS-VYKGQLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F + V +L T A+K+LE E + E + R+ H V
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 149
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 207 K---SACKSSDLWALGCIIYQLVAG 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 39 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 98
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 99 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 154
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 155 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 212 K---SACKSSDLWALGCIIYQLVAG 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 152
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 153 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 210 K---SACKSSDLWALGCIIYQLVAG 231
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVVQLLG 127
LG G FG V G+ Q TG +AVK+L K + + + E+ + H ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
S + +V EY+ G L ++ K R + + +L + L ++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYIC-KHGRVEEMEARRLFQQILS---AVDYCHRHM--- 131
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
++H D+KP N+LLD + K++DFGL+ + +F+ S G+ Y APE+IS
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRDSC--GSPNYAAPEVISGRL-Y 187
Query: 248 VSCKSDVYGFGMVLLEMAGG 267
+ D++ G++L + G
Sbjct: 188 AGPEVDIWSCGVILYALLCG 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 124
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTLDYLPPEMIEG 180
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 181 RMHDE--KVDLWSLGVLCYEFLVGK 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 124
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGTLDYLPPEMIEG 180
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 181 RMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 73 LGQGGFGSVY-----KGQLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRIHHVNVVQL 125
LG+G FG V TG ++AVK L+ + E+ + ++H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 126 LGFCSEGSKRAL--VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
G C + +L V EY+P GSL R P+ S G + +L A G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSL-RDYLPRHSIGLA----QLLLFAQQICEGMAYLHAQ 153
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPELIS 242
+H D+ N+LLD++ + K+ DFGLAK P+ ++ + + + + APE +
Sbjct: 154 H---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 243 RNFGTVSCKSDVYGFGMVLLEM 264
SDV+ FG+ L E+
Sbjct: 211 EY--KFYYASDVWSFGVTLYEL 230
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 18/202 (8%)
Query: 73 LGQGGFGSVYKGQLQ-----TGGLIAVKML--ENSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG+G FG V + TG +AVK L E+ + E+ + ++H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 126 LGFCSE--GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
G C+E G+ L+ E++P+GSL + PK +L ++ + A+ +G++YL +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSL-KEYLPKNKNKINL--KQQLKYAVQICKGMDYLGSR 145
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPELIS 242
V H D+ N+L++ K+ DFGL K + + ++ R + + + APE +
Sbjct: 146 QYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 243 RNFGTVSCKSDVYGFGMVLLEM 264
++ ++ SDV+ FG+ L E+
Sbjct: 203 QSKFYIA--SDVWSFGVTLHEL 222
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 18/202 (8%)
Query: 73 LGQGGFGSVYKGQLQ-----TGGLIAVKML--ENSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG+G FG V + TG +AVK L E+ + E+ + ++H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 126 LGFCSE--GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
G C+E G+ L+ E++P+GSL + PK +L ++ + A+ +G++YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSL-KEYLPKNKNKINL--KQQLKYAVQICKGMDYLGSR 133
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPELIS 242
V H D+ N+L++ K+ DFGL K + + ++ R + + + APE +
Sbjct: 134 QYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 243 RNFGTVSCKSDVYGFGMVLLEM 264
++ ++ SDV+ FG+ L E+
Sbjct: 191 QSKFYIA--SDVWSFGVTLHEL 210
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 100
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 101 KLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 156
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 157 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 214 K---SACKSSDLWALGCIIYQLVAG 235
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 244 NFGTVSCK-SDVYGFGMVLLEMAGG 267
+CK SD++ G ++ ++ G
Sbjct: 209 K---SACKSSDLWALGCIIYQLVAG 230
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 125
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P GT+ Y+ PE+I
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIEG 181
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 182 RMHDE--KVDLWSLGVLCYEFLVGK 204
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 127
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P GT+ Y+ PE+I
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEG 183
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 184 RMH--DEKVDLWSLGVLCYEFLVGK 206
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G + + + Q L K E TA I L N C
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL-------QKLS--KFDEQR--TATYITELANALSYC 129
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P GT+ Y+ PE+I
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYLPPEMIEG 185
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 186 RMH--DEKVDLWSLGVLCYEFLVGK 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 126
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P GT+ Y+ PE+I
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEG 182
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 183 RMHDE--KVDLWSLGVLCYEFLVGK 205
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G + + + Q L K E TA I L N C
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL-------QKLS--KFDEQR--TATYITELANALSYC 129
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 185
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 186 RMHDE--KVDLWSLGVLCYEFLVGK 208
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 30/208 (14%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G V+K + TG ++A+K E+ + + E+ + ++ H N+V LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRG------QSLCWEKLHEVALGTARGIEYLH 181
+ LV+EY + L H + RG +S+ W+ L V + H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQAVNFC------HKH 121
Query: 182 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 241
N CI H D+KP NIL+ + + K+ DFG A+ +D+ T Y +PEL+
Sbjct: 122 N----CI-HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV--ATRWYRSPELL 174
Query: 242 --SRNFGTVSCKSDVYGFGMVLLEMAGG 267
+G DV+ G V E+ G
Sbjct: 175 VGDTQYGP---PVDVWAIGCVFAELLSG 199
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 124
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P GT+ Y+ PE+I
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEG 180
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 181 RMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q ++A+K+L ++ + EV + H N+++L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 73 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 121
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 177
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 178 RMH--DEKVDLWSLGVLCYEFLVGK 200
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 69 FTHKLGQGGFGSVYKGQ-LQTGGLIAVK-MLENSKFSAEEFINEVSTIGRIHHVNVVQLL 126
F KLG+GGF V + L G A+K +L + + EE E +H N+++L+
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 127 GFC--SEGSKRA--LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
+C G+K L+ + G+L + + +G L +++ + LG RG+E +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFG---LAKFHPKEN----DFVSISATRGTIGY 235
H D+KP NILL P + D G A H + + +A R TI Y
Sbjct: 153 KG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 236 IAPELIS-RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNM 273
APEL S ++ + ++DV+ G VL M G +M
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 123
F LG+G F +V +L T A+K+LE E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+L + K Y NG L +++ S ++ E+ +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGG 267
S SD++ G ++ ++ G
Sbjct: 209 KSAXKS--SDLWALGCIIYQLVAG 230
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 110/218 (50%), Gaps = 30/218 (13%)
Query: 71 HKLGQGGFGSVYKG-QLQTGGLIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
++G+G FG V+KG +T ++A+K+++ ++ E+ E++ + + V + G
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 128 FCSEGSKRALVYEYMPNGS---LDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+GSK ++ EY+ GS L R E + ++ E L +G++YLH+
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL--------KGLDYLHSEK 140
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPEL 240
+ H DIK N+LL K++DFG+A K N FV GT ++APE+
Sbjct: 141 KI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV------GTPFWMAPEV 191
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEMAGGR-RNSNMNATR 277
I ++ K+D++ G+ +E+A G NS+M+ R
Sbjct: 192 IQQS--AYDSKADIWSLGITAIELAKGEPPNSDMHPMR 227
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 73 LGQGGFGSVYKGQL--QTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLL 126
LG+G FG VY+G G I V + K E+F++E + + H ++V+L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G E ++ E P G L ++ E SL L +L + + YL + +
Sbjct: 76 GIIEE-EPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLES---I 128
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H DI NIL+ K+ DFGL+++ E D+ S TR I +++PE I NF
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESI--NFR 185
Query: 247 TVSCKSDVYGFGMVLLEM 264
+ SDV+ F + + E+
Sbjct: 186 RFTTASDVWMFAVCMWEI 203
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 73 LGQGGFGSVYKGQL--QTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLL 126
LG+G FG VY+G G I V + K E+F++E + + H ++V+L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G E ++ E P G L ++ E SL L +L + + YL + +
Sbjct: 92 GIIEE-EPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLES---I 144
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H DI NIL+ K+ DFGL+++ E D+ S TR I +++PE I NF
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESI--NFR 201
Query: 247 TVSCKSDVYGFGMVLLEM 264
+ SDV+ F + + E+
Sbjct: 202 RFTTASDVWMFAVCMWEI 219
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 63 IAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVK-MLENSKFSAEEFINEVSTIGRIHHVN 121
IA TN +G G FG V++ +L +A+K +L++ +F E + + + H N
Sbjct: 40 IAYTN--CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRE----LQIMRIVKHPN 93
Query: 122 VVQLLGFC-SEGSKRA-----LVYEYMPNG--SLDRHVFPKESRGQSLCWEKLHEVALGT 173
VV L F S G K+ LV EY+P RH + K + + KL+ L
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRH-YAKLKQTMPMLLIKLYMYQL-- 150
Query: 174 ARGIEYLHNGCDVCILHFDIKPHNILLD-HNFIPKVSDFGLAKFHPKENDFVSISATRGT 232
R + Y+H+ + I H DIKP N+LLD + + K+ DFG AK VS +R
Sbjct: 151 LRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR-- 205
Query: 233 IGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 268
Y APELI FG + + D++ G V+ E+ G+
Sbjct: 206 -YYRAPELI---FGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 73 LGQGGFGSVYKGQL--QTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLL 126
LG+G FG VY+G G I V + K E+F++E + + H ++V+L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G E ++ E P G L ++ E SL L +L + + YL + +
Sbjct: 80 GIIEE-EPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLES---I 132
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H DI NIL+ K+ DFGL+++ E D+ S TR I +++PE I NF
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESI--NFR 189
Query: 247 TVSCKSDVYGFGMVLLEM 264
+ SDV+ F + + E+
Sbjct: 190 RFTTASDVWMFAVCMWEI 207
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 126
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K+++FG + P + GT+ Y+ PE+I
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 182
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 183 RMHDE--KVDLWSLGVLCYEFLVGK 205
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 18/198 (9%)
Query: 76 GGFGSVYKGQ-LQTGGLIAVKMLEN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS 133
G FG VYK Q +T L A K+++ S+ E+++ E+ + H N+V+LL +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 134 KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDI 193
++ E+ G++D + E + L ++ V T + YLH D I+H D+
Sbjct: 81 NLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 134
Query: 194 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG---YIAPELI---SRNFGT 247
K NIL + K++DFG++ +N I IG ++APE++ +
Sbjct: 135 KAGNILFTLDGDIKLADFGVS----AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRP 190
Query: 248 VSCKSDVYGFGMVLLEMA 265
K+DV+ G+ L+EMA
Sbjct: 191 YDYKADVWSLGITLIEMA 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 127
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K+++FG + P + GT+ Y+ PE+I
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 183
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 184 RMH--DEKVDLWSLGVLCYEFLVGK 206
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q+ ++A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ L+ EY P G++ R + Q L K E TA I L N C
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 129
Query: 188 ----ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
++H DIKP N+LL K++DFG + P + GT+ Y+ PE I
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEXIEG 185
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGGR 268
K D++ G++ E G+
Sbjct: 186 RXHDE--KVDLWSLGVLCYEFLVGK 208
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G +G V K + + TG ++A+K ++ K + + E+ + ++ H N+V LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 129 CSEGSKRALVYEYMPNGSLDR-HVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
C + + LV+E++ + LD +FP L ++ + + GI + H+
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCHSHN--- 144
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI--SRNF 245
I+H DIKP NIL+ + + K+ DFG A+ + T Y APEL+ +
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV--ATRWYRAPELLVGDVKY 202
Query: 246 GTVSCKSDVYGFGMVLLEMAGG 267
G DV+ G ++ EM G
Sbjct: 203 GKA---VDVWAIGCLVTEMFMG 221
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+LG G G V+K + GL+ + L E + I E+ + + +V G
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 75
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
+ ++ E+M GSLD+ V K R + + L +V++ +G+ YL I
Sbjct: 76 FYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--I 129
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE--NDFVSISATRGTIGYIAPELISRNFG 246
+H D+KP NIL++ K+ DFG++ E N+FV GT Y++PE R G
Sbjct: 130 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV------GTRSYMSPE---RLQG 180
Query: 247 T-VSCKSDVYGFGMVLLEMAGGR 268
T S +SD++ G+ L+EMA GR
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 109/269 (40%), Gaps = 86/269 (31%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ ++E + E+ + I HH+NVV
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 124 QLLG--------------FCSEG-------SKRALVYEYMPNGSLDRHVFPKESR----- 157
LLG +C G SKR L + N H+ PK+ +
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDL---FFLNKDAALHMEPKKEKMEPGL 151
Query: 158 -----------------------------------------GQSLCWEKLHEVALGTARG 176
+ + E L + ARG
Sbjct: 152 EQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARG 211
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 236
+E+L + CI H D+ NILL N + K+ DFGLA+ K D+V TR + ++
Sbjct: 212 MEFLSS--RKCI-HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWM 268
Query: 237 APELISRNFGTV-SCKSDVYGFGMVLLEM 264
APE I F + S KSDV+ +G++L E+
Sbjct: 269 APESI---FDKIYSTKSDVWSYGVLLWEI 294
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 35/273 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 138
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 199 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 247
Query: 304 EIES-MIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ MI RK C + A RP +++
Sbjct: 248 TIDVYMIMRK-------CWMIDADSRPKFRELI 273
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 35/273 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 145
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 146 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 205
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 206 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 254
Query: 304 EIES-MIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ MI RK C + A RP +++
Sbjct: 255 TIDVYMIMRK-------CWMIDADSRPKFRELI 280
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFI--NEVSTIGRIHHVNVVQLLGFC 129
+LG G FG V++ + G + V N+ + +++ NE+S + ++HH ++ L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC----- 184
+ + L+ E++ G L + ++ + + A I Y+ C
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYK-------------MSEAEVINYMRQACEGLKH 164
Query: 185 --DVCILHFDIKPHNILLDHNFIP--KVSDFGLA-KFHPKENDFVSISATRGTIGYIAPE 239
+ I+H DIKP NI+ + K+ DFGLA K +P E + T T + APE
Sbjct: 165 MHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE----IVKVTTATAEFAAPE 220
Query: 240 LISRNFGTVSCKSDVYGFGMV 260
++ R V +D++ G++
Sbjct: 221 IVDRE--PVGFYTDMWAIGVL 239
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQ 124
H K+G+G +G VYK Q G A+K + K I E+S + + H N+V+
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
L + LV+E++ + L + + E +S+ + L GI Y H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF---LLQLLNGIAYCH--- 117
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELI-- 241
D +LH D+KP N+L++ K++DFGLA+ F + T+ Y AP+++
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV---TLWYRAPDVLMG 174
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGG 267
S+ + T D++ G + EM G
Sbjct: 175 SKKYSTT---IDIWSVGCIFAEMVNG 197
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F +G G FG V ++TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EYMP G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D KV+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
Query: 97 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGS-LD--RHVFP 153
LE + S +E + E+ + + HH N+V + LV + + GS LD +H+
Sbjct: 50 LEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVA 109
Query: 154 K-ESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFG 212
K E + L + + G+EYLH + H D+K NILL + +++DFG
Sbjct: 110 KGEHKSGVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFG 166
Query: 213 LAKFHPKENDFVSISATR---GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
++ F D + GT ++APE++ + G K+D++ FG+ +E+A G
Sbjct: 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATG 223
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+LG G G V+K + GL+ + L E + I E+ + + +V G
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 91
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
+ ++ E+M GSLD+ V K R + + L +V++ +G+ YL I
Sbjct: 92 FYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--I 145
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R G
Sbjct: 146 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQG 196
Query: 247 T-VSCKSDVYGFGMVLLEMAGGR 268
T S +SD++ G+ L+EMA GR
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGR 219
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 105 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL---DRHVFPKESRGQSL 161
++F NE+ I I + + G + + ++YEYM N S+ D + F +
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 162 CWEKLHEVALGTA-RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220
++ + + + Y+HN ++C H D+KP NIL+D N K+SDFG +++ +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNIC--HRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
Query: 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
I +RGT ++ PE S K D++ G+ L M
Sbjct: 206 ----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 139
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 200 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 248
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 249 TID------VYMIMVKCWMIDADSRPKFRELI 274
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F +G G FG V ++TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EYMP G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D KV+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQ 124
H K+G+G +G VYK Q G A+K + K I E+S + + H N+V+
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
L + LV+E++ + L + + E +S+ + L GI Y H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF---LLQLLNGIAYCH--- 117
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELI-- 241
D +LH D+KP N+L++ K++DFGLA+ F + T+ Y AP+++
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV---TLWYRAPDVLMG 174
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGG 267
S+ + T D++ G + EM G
Sbjct: 175 SKKYSTT---IDIWSVGCIFAEMVNG 197
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLLG- 127
+LG G G V+K + GL+ + L E + I E+ + + +V G
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 134
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
F S+G + ++ E+M GSLD+ V K R + + L +V++ +G+ YL
Sbjct: 135 FYSDG-EISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK-- 187
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNF 245
I+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQ 238
Query: 246 GT-VSCKSDVYGFGMVLLEMAGGR 268
GT S +SD++ G+ L+EMA GR
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKML----ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G +G V++G L G +AVK+ E S F E N V + H N+ LGF
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTV----LLRHDNI---LGF 67
Query: 129 CSE-------GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+ ++ L+ Y +GSL + + Q+L +A+ A G+ +LH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFL-----QRQTLEPHLALRLAVSAACGLAHLH 122
Query: 182 -----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI--SATRGTIG 234
I H D K N+L+ N ++D GLA H + +D++ I + GT
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKR 182
Query: 235 YIAPELISRNFGTVSCKS----DVYGFGMVLLEMA 265
Y+APE++ T +S D++ FG+VL E+A
Sbjct: 183 YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
Query: 97 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGS-LD--RHVFP 153
LE + S +E + E+ + + HH N+V + LV + + GS LD +H+
Sbjct: 45 LEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVA 104
Query: 154 K-ESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFG 212
K E + L + + G+EYLH + H D+K NILL + +++DFG
Sbjct: 105 KGEHKSGVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFG 161
Query: 213 LAKFHPKENDFVSISATR---GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
++ F D + GT ++APE++ + G K+D++ FG+ +E+A G
Sbjct: 162 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATG 218
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+LG G G V+K + GL+ + L E + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
+ ++ E+M GSLD+ V K R + + L +V++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R G
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQG 177
Query: 247 T-VSCKSDVYGFGMVLLEMAGGR 268
T S +SD++ G+ L+EMA GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 35/273 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 135
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 196 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 244
Query: 304 EIES-MIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ MI RK C + A RP +++
Sbjct: 245 TIDVYMIMRK-------CWMIDADSRPKFRELI 270
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGXLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 136
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 197 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 245
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 246 TID------VYMIMVKCWMIDADSRPKFRELI 271
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 55 KRYSYPQIIAMTNHFTHKLGQGGFGSV-----YKGQLQTG-GLIAVKMLENSKFSAEEFI 108
KR+ P II T LG+G FG V YK Q + I+ ++L+ S
Sbjct: 5 KRHIGPYIIRET------LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VE 57
Query: 109 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHE 168
E+S + + H ++++L + + +V EY G L ++ K+ + +
Sbjct: 58 REISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQ 116
Query: 169 VALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 228
+ IEY H I+H D+KP N+LLD N K++DFGL+ N F+ S
Sbjct: 117 IICA----IEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-FLKTSC 168
Query: 229 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
G+ Y APE+I+ + DV+ G+VL M GR
Sbjct: 169 --GSPNYAAPEVINGKL-YAGPEVDVWSCGIVLYVMLVGR 205
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 83 LGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 135
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 196 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 244
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 245 TID------VYMIMVKCWMIDADSRPKFRELI 270
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQ 124
H K+G+G +G VYK Q G A+K + K I E+S + + H N+V+
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
L + LV+E++ + L + + E +S+ + L GI Y H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF---LLQLLNGIAYCH--- 117
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELI- 241
D +LH D+KP N+L++ K++DFGLA+ P I T+ Y AP+++
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV----TLWYRAPDVLM 173
Query: 242 -SRNFGTVSCKSDVYGFGMVLLEMAGG 267
S+ + T D++ G + EM G
Sbjct: 174 GSKKYSTT---IDIWSVGCIFAEMVNG 197
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 137
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 198 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 246
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 247 TID------VYMIMVKCWMIDADSRPKFRELI 272
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 86 LGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 138
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 199 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 247
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 248 TID------VYMIMVKCWMIDADSRPKFRELI 273
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 136
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 197 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 245
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 246 TID------VYMIMVKCWMIDADSRPKFRELI 271
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 108 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 160
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 161 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 220
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 221 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 269
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 270 TID------VYMIMVKCWMIDADSRPKFRELI 295
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+LG G G V+K + GL+ + L E + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
+ ++ E+M GSLD+ V K R + + L +V++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R G
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQG 177
Query: 247 T-VSCKSDVYGFGMVLLEMAGGR 268
T S +SD++ G+ L+EMA GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 137
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 198 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 246
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 247 TID------VYMIMVKCWMIDADSRPKFRELI 272
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+LG G G V+K + GL+ + L E + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
+ ++ E+M GSLD+ V K R + + L +V++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R G
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQG 177
Query: 247 T-VSCKSDVYGFGMVLLEMAGGR 268
T S +SD++ G+ L+EMA GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 41/230 (17%)
Query: 72 KLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQLLG 127
+LG+G F V + +T GL A K++ K SA +F E ++ H N+V+L
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQ---SLCWEKLHEVALGTARGIEYLH-NG 183
E S LV++ + G L + +E + S C +++ E I Y H NG
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------SIAYCHSNG 125
Query: 184 CDVCILHFDIKPHNILLDHN---FIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 240
I+H ++KP N+LL K++DFGLA + ND + GT GY++PE+
Sbjct: 126 ----IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEV 178
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQ 290
+ ++ S D++ G++L + G Y P W DQ
Sbjct: 179 LKKD--PYSKPVDIWACGVILYILLVG--------------YPPFWDEDQ 212
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 138
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 199 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 247
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 248 TID------VYMIMVKCWMIDADSRPKFRELI 273
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+LG G G V+K + GL+ + L E + I E+ + + +V G
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 99
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
+ ++ E+M GSLD+ V K R + + L +V++ +G+ YL I
Sbjct: 100 FYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--I 153
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R G
Sbjct: 154 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQG 204
Query: 247 T-VSCKSDVYGFGMVLLEMAGGR 268
T S +SD++ G+ L+EMA GR
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 135
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 196 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 244
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 245 TID------VYMIMVKCWMIDADSRPKFRELI 270
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 41/230 (17%)
Query: 72 KLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQLLG 127
+LG+G F V + +T GL A K++ K SA +F E ++ H N+V+L
Sbjct: 12 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 71
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQ---SLCWEKLHEVALGTARGIEYLH-NG 183
E S LV++ + G L + +E + S C +++ E I Y H NG
Sbjct: 72 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------SIAYCHSNG 124
Query: 184 CDVCILHFDIKPHNILLDHN---FIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 240
I+H ++KP N+LL K++DFGLA + ND + GT GY++PE+
Sbjct: 125 ----IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEV 177
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQ 290
+ ++ S D++ G++L + G Y P W DQ
Sbjct: 178 LKKD--PYSKPVDIWACGVILYILLVG--------------YPPFWDEDQ 211
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 135
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 196 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 244
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 245 TID------VYMIMVKCWMIDADSRPKFRELI 270
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+LG G G V+K + GL+ + L E + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
+ ++ E+M GSLD+ V K R + + L +V++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R G
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQG 177
Query: 247 T-VSCKSDVYGFGMVLLEMAGGR 268
T S +SD++ G+ L+EMA GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+LG G G V+K + GL+ + L E + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
+ ++ E+M GSLD+ V K R + + L +V++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R G
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQG 177
Query: 247 T-VSCKSDVYGFGMVLLEMAGGR 268
T S +SD++ G+ L+EMA GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 129
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 190 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 238
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 239 TID------VYMIMVKCWMIDADSRPKFRELI 264
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 41/230 (17%)
Query: 72 KLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQLLG 127
+LG+G F V + +T GL A K++ K SA +F E ++ H N+V+L
Sbjct: 36 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 95
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKE---SRGQSLCWEKLHEVALGTARGIEYLH-NG 183
E S LV++ + G L + +E S C +++ E I Y H NG
Sbjct: 96 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------SIAYCHSNG 148
Query: 184 CDVCILHFDIKPHNILLDHN---FIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 240
I+H ++KP N+LL K++DFGLA + ND + GT GY++PE+
Sbjct: 149 ----IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEV 201
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQ 290
+ ++ S D++ G++L + G Y P W DQ
Sbjct: 202 LKKD--PYSKPVDIWACGVILYILLVG--------------YPPFWDEDQ 235
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 65 MTNHFTHKLGQGGFGSVYKG----QLQTGGLIAVKMLE--NSKFSAEEFINEVSTIGRIH 118
+ H +G+G FG VY G Q Q A+K L E F+ E + ++
Sbjct: 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN 80
Query: 119 HVNVVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARG 176
H NV+ L+G EG L+ YM +G L + + S ++ + L L ARG
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFI---RSPQRNPTVKDLISFGLQVARG 136
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT---I 233
+EYL + +H D+ N +LD +F KV+DFGLA+ + ++ S+ R +
Sbjct: 137 MEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR-DILDREYYSVQQHRHARLPV 192
Query: 234 GYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 264
+ A E L + F T KSDV+ FG++L E+
Sbjct: 193 KWTALESLQTYRFTT---KSDVWSFGVLLWEL 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 138
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 199 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 247
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 248 TID------VYMIMVKCWMIDADSRPKFRELI 273
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ S+D F S + + +G+ + H+
Sbjct: 73 VIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ S+D F S + + +G+ + H+
Sbjct: 71 VIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 124
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 176
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 177 --LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 89 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 141
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 142 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 201
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 202 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 250
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 251 TID------VYMIMVKCWMIDADSRPKFRELI 276
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ S+D F S + + +G+ + H+
Sbjct: 73 VIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ S+D F S + + +G+ + H+
Sbjct: 72 VIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 125
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 177
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 178 --LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 67 NHFT--HKLGQGGFGSVYKGQL-QTGGLIAVKMLENSKF----SAEEFINEVSTIGRIHH 119
+HF +G+G FG V Q T + A+K + K E+ + + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 120 VNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV-----FPKESRGQSLCWEKLHEVALGTA 174
+V L + +V + + G L H+ F +E+ +C E+ +
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC-----ELVMA-- 127
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 234
++YL N I+H D+KP NILLD + ++DF +A P+E I+ GT
Sbjct: 128 --LDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE---TQITTMAGTKP 179
Query: 235 YIAPELISRNFGT-VSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSK 280
Y+APE+ S G S D + G+ E+ GRR ++ ++ SSK
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK 226
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 142
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 203 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 251
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 252 TID------VYMIMVKCWMIDADSRPKFRELI 277
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG---LIAVKMLE----NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G I V ++E S + +E ++E + + + +V +L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 169
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 170 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 229
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 230 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 278
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 279 TID------VYMIMVKCWMIDADSRPKFRELI 304
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 41/230 (17%)
Query: 72 KLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQLLG 127
+LG+G F V + +T GL A K++ K SA +F E ++ H N+V+L
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQ---SLCWEKLHEVALGTARGIEYLH-NG 183
E S LV++ + G L + +E + S C +++ E I Y H NG
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------SIAYCHSNG 125
Query: 184 CDVCILHFDIKPHNILLDHN---FIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 240
I+H ++KP N+LL K++DFGLA + ND + GT GY++PE+
Sbjct: 126 ----IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEV 178
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQ 290
+ ++ S D++ G++L + G Y P W DQ
Sbjct: 179 LKKD--PYSKPVDIWACGVILYILLVG--------------YPPFWDEDQ 212
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 73 LGQGGFGSVYKGQL-QTGG---LIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQL 125
LG+G FGSV + QL Q G +AVKML+ ++ EEF+ E + + H +V +L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 126 LGFCSEGSKRA------LVYEYMPNGSLDRHVFPKESR-GQS---LCWEKLHEVALGTAR 175
+G + ++ +M +G D H F SR G++ L + L + A
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHG--DLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGY 235
G+EYL + +H D+ N +L + V+DFGL++ + + A++ + +
Sbjct: 149 GMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKW 205
Query: 236 IAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+A E ++ N TV SDV+ FG+ + E+
Sbjct: 206 LALESLADNLYTV--HSDVWAFGVTMWEI 232
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 69 FTHKLGQGGFGSVY-KGQLQTGGLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNVVQLL 126
F LG G F V+ Q TG L A+K ++ S F NE++ + +I H N+V L
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPK---ESRGQSLCWEKLHEVALGTARGIEYLH-N 182
+ LV + + G L + + + SL +++ ++YLH N
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV-------LSAVKYLHEN 125
Query: 183 GCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 239
G I+H D+KP N+L + N ++DFGL+K ++N +S + GT GY+APE
Sbjct: 126 G----IVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTAC--GTPGYVAPE 177
Query: 240 LISRNFGTVSCKSDVYGFGMV 260
++++ S D + G++
Sbjct: 178 VLAQK--PYSKAVDCWSIGVI 196
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 73 LGQGGFGSVYKGQLQT----GGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G +E ++ E G L + + R SL L A + + YL +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 187
Query: 247 TVSCKSDVYGFGMVLLEM 264
+ SDV+ FG+ + E+
Sbjct: 188 RFTSASDVWMFGVCMWEI 205
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY P G + H+
Sbjct: 73 ILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+++D KV+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
GLAK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GLAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 26/203 (12%)
Query: 68 HFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEE--FINEVSTIGRIHHVNVVQ 124
F LG G F V + + TG L AVK + +E NE++ + +I H N+V
Sbjct: 25 EFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA 84
Query: 125 LLGFCSEGSKRALVYEYMPNGSL-DRHV---FPKESRGQSLCWEKLHEVALGTARGIEYL 180
L + LV + + G L DR V F E +L + L + YL
Sbjct: 85 LEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD--------AVYYL 136
Query: 181 HNGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
H + I+H D+KP N+L D +SDFGL+K K D +S + GT GY+A
Sbjct: 137 HR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGK-GDVMSTAC--GTPGYVA 190
Query: 238 PELISRNFGTVSCKSDVYGFGMV 260
PE++++ S D + G++
Sbjct: 191 PEVLAQK--PYSKAVDCWSIGVI 211
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 30/247 (12%)
Query: 72 KLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRIHHVN-VVQLLG 127
++G+G +GSV K +G ++AVK + ++ E+ + ++ + R +VQ G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 128 FCSEGSKRALVYEYMPNGSLDR-HVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ E M + S D+ + + + E L ++ L T + + +L ++
Sbjct: 89 ALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE--NL 145
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI--SRN 244
I+H DIKP NILLD + K+ DFG++ + D ++ + G Y+APE I S +
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISG---QLVDSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSW--VYDQLN---KGGDLEL 299
+SDV+ G+ L E+A GR +P W V+DQL KG +L
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFP------------YPKWNSVFDQLTQVVKGDPPQL 250
Query: 300 QNVTEIE 306
N E E
Sbjct: 251 SNSEERE 257
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 69 FTHKLGQGGFGSVYKGQL-QTGGLIAVKMLENSKFSAEEFINEVSTIGRI-----HHVNV 122
F LG+G FG V ++ +TG L AVK+L+ ++ + T RI +H +
Sbjct: 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL 86
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182
QL + V E++ G L H+ ++SR + + + +A + +LH
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAEIISA--LMFLH- 141
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
D I++ D+K N+LLDH K++DFG+ K + V+ + GT YIAPE++
Sbjct: 142 --DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEILQ 197
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGGR-------RNSNMNATRSSKAYFPSWVYDQ 290
+ D + G++L EM G + A + + +P+W+++
Sbjct: 198 EMLYGPAV--DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHED 250
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 73 LGQGGFGSVYKGQLQTGG-LIAVKMLENS---KFSAEEFIN-EVSTIGRIHHVNVVQLLG 127
LG G FG V+ + + G A+K+L+ + E N E + + H ++++ G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + ++ +Y+ G L F + Q A +EYLH+
Sbjct: 74 TFQDAQQIFMIMDYIEGGEL----FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD--- 126
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
I++ D+KP NILLD N K++DFG AK+ P + GT YIAPE++S
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDYIAPEVVSTKPYN 181
Query: 248 VSCKSDVYGFGMVLLEMAGG 267
S D + FG+++ EM G
Sbjct: 182 KSI--DWWSFGILIYEMLAG 199
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 73 LGQGGFGSVYKGQLQT----GGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G +E ++ E G L + + R SL L A + + YL +
Sbjct: 106 GVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 159
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 160 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 215
Query: 247 TVSCKSDVYGFGMVLLEM 264
+ SDV+ FG+ + E+
Sbjct: 216 RFTSASDVWMFGVCMWEI 233
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 73 LGQGGFGSVYKGQLQT----GGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G +E ++ E G L + + R SL L A + + YL +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 187
Query: 247 TVSCKSDVYGFGMVLLEM 264
+ SDV+ FG+ + E+
Sbjct: 188 RFTSASDVWMFGVCMWEI 205
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 109/217 (50%), Gaps = 30/217 (13%)
Query: 72 KLGQGGFGSVYKG-QLQTGGLIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
++G+G FG VYKG T ++A+K+++ ++ E+ E++ + + + + G
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFP---KESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+ +K ++ EY+ GS + P +E+ ++ E L +G++YLH+
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREIL--------KGLDYLHSERK 137
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPELI 241
+ H DIK N+LL K++DFG+A K N FV GT ++APE+I
Sbjct: 138 I---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPEVI 188
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGGR-RNSNMNATR 277
++ K+D++ G+ +E+A G NS+++ R
Sbjct: 189 KQS--AYDFKADIWSLGITAIELAKGEPPNSDLHPMR 223
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 73 LGQGGFGSVYKGQLQT----GGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G +E ++ E G L + + R SL L A + + YL +
Sbjct: 75 GVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 128
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 129 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 184
Query: 247 TVSCKSDVYGFGMVLLEM 264
+ SDV+ FG+ + E+
Sbjct: 185 RFTSASDVWMFGVCMWEI 202
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 73 LGQGGFGSVYKGQLQT----GGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G +E ++ E G L + + R SL L A + + YL +
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 133
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 134 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 189
Query: 247 TVSCKSDVYGFGMVLLEM 264
+ SDV+ FG+ + E+
Sbjct: 190 RFTSASDVWMFGVCMWEI 207
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A G+ YL D
Sbjct: 80 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAEGMNYLE---D 132
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 133 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 192
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 193 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 241
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 242 TID------VYMIMVKCWMIDADSRPKFRELI 267
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 73 LGQGGFGSVYKGQLQT----GGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G +E ++ E G L + + R SL L A + + YL +
Sbjct: 83 GVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 136
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 137 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 192
Query: 247 TVSCKSDVYGFGMVLLEM 264
+ SDV+ FG+ + E+
Sbjct: 193 RFTSASDVWMFGVCMWEI 210
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 73 LGQGGFGSVYKGQLQT----GGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G +E ++ E G L + + R SL L A + + YL +
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 134
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 135 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 190
Query: 247 TVSCKSDVYGFGMVLLEM 264
+ SDV+ FG+ + E+
Sbjct: 191 RFTSASDVWMFGVCMWEI 208
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
+LG+G +G V K + + +G ++AVK + + S E+ ++ ++ + V G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ E M + SLD+ +GQ++ + L ++A+ + +E+LH+ +
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLS 174
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR--NF 245
++H D+KP N+L++ K+ DFG++ + D V+ + G Y+APE I+ N
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYL---VDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 246 GTVSCKSDVYGFGMVLLEMA 265
S KSD++ G+ ++E+A
Sbjct: 232 KGYSVKSDIWSLGITMIELA 251
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 105/208 (50%), Gaps = 28/208 (13%)
Query: 72 KLGQGGFGSVYKGQ-LQTGG-LIAVKMLENSKFSAEE-----FINEVSTIGRIH---HVN 121
++G+G +G V+K + L+ GG +A+K + + EE I EV+ + + H N
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 122 VVQLLGFCS-----EGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARG 176
VV+L C+ +K LV+E++ D + + + E + ++ RG
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 236
+++LH+ ++H D+KP NIL+ + K++DFGLA+ + + S+ T+ Y
Sbjct: 133 LDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV---TLWYR 186
Query: 237 APELISRNFGTVSCKSDVYGFGMVLLEM 264
APE++ ++ + + D++ G + EM
Sbjct: 187 APEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F +G G FG V ++TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D KV+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 105/208 (50%), Gaps = 28/208 (13%)
Query: 72 KLGQGGFGSVYKGQ-LQTGG-LIAVKMLENSKFSAEE-----FINEVSTIGRIH---HVN 121
++G+G +G V+K + L+ GG +A+K + + EE I EV+ + + H N
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 122 VVQLLGFCS-----EGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARG 176
VV+L C+ +K LV+E++ D + + + E + ++ RG
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 236
+++LH+ ++H D+KP NIL+ + K++DFGLA+ + + S+ T+ Y
Sbjct: 133 LDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV---TLWYR 186
Query: 237 APELISRNFGTVSCKSDVYGFGMVLLEM 264
APE++ ++ + + D++ G + EM
Sbjct: 187 APEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 105/208 (50%), Gaps = 28/208 (13%)
Query: 72 KLGQGGFGSVYKGQ-LQTGG-LIAVKMLENSKFSAEE-----FINEVSTIGRIH---HVN 121
++G+G +G V+K + L+ GG +A+K + + EE I EV+ + + H N
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 122 VVQLLGFCS-----EGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARG 176
VV+L C+ +K LV+E++ D + + + E + ++ RG
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 236
+++LH+ ++H D+KP NIL+ + K++DFGLA+ + + S+ T+ Y
Sbjct: 133 LDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV---TLWYR 186
Query: 237 APELISRNFGTVSCKSDVYGFGMVLLEM 264
APE++ ++ + + D++ G + EM
Sbjct: 187 APEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK K + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAK-RVKGRTWTLC----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 35/273 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 137
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 198 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 246
Query: 304 EIES-MIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ MI RK C + A RP +++
Sbjct: 247 TIDVYMIMRK-------CWMIDADSRPKFRELI 272
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 23/199 (11%)
Query: 72 KLGQGGFGSVY--KGQLQTGGLIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVVQL 125
KLG G +G V K +L TG A+K+++ S + ++EV+ + ++ H N+++L
Sbjct: 11 KLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
F + LV E G L + ++ + + +V GT YLH
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT----YLHKHN- 124
Query: 186 VCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
I+H D+KP N+LL+ + + K+ DFGL+ + GT YIAPE++
Sbjct: 125 --IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERLGTAYYIAPEVLR 179
Query: 243 RNFGTVSCKSDVYGFGMVL 261
+ + K DV+ G++L
Sbjct: 180 KKYDE---KCDVWSCGVIL 195
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 28/275 (10%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAV-KMLENSKFSAEE---FINEVSTIGRIHHVNVVQLL 126
+ +G G +G K + ++ G I V K L+ + E ++EV+ + + H N+V+
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 127 GFCSEGSKRAL--VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ + L V EY G L + Q L E + V ++ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 185 D--VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
D +LH D+KP N+ LD K+ DFGLA+ + DF GT Y++PE ++
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV--GTPYYMSPEQMN 189
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWV-YDQLNKGGDLELQN 301
R + + KSD++ G +L E+ A P + + Q G +
Sbjct: 190 RM--SYNEKSDIWSLGCLLYELC---------------ALMPPFTAFSQKELAGKIREGK 232
Query: 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336
I + +L I + +K RPS+ ++LE
Sbjct: 233 FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY P G + H+
Sbjct: 73 ILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+++D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
GLAK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GLAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 35/273 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 137
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 198 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 246
Query: 304 EIES-MIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ MI RK C + A RP +++
Sbjct: 247 TIDVYMIMRK-------CWMIDADSRPKFRELI 272
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+++D KV+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 65 MTNHFT-------HKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAE----EFINEVS 112
+T HFT LG+G FG+VY + ++ ++A+K+L S+ E + E+
Sbjct: 16 LTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIE 75
Query: 113 TIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALG 172
+HH N+++L + + + L+ EY P G L + + + + ++ +
Sbjct: 76 IQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEE 131
Query: 173 TARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT 232
A + Y H ++H DIKP N+LL K++DFG + P + GT
Sbjct: 132 LADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRRKTMCGT 184
Query: 233 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
+ Y+ PE+I K D++ G++ E+ G
Sbjct: 185 LDYLPPEMIEGRMHNE--KVDLWCIGVLCYELLVG 217
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 73 LGQGGFGSVYKGQLQT----GGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G +E ++ E G L + + R SL L A + + YL +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT--IGYIAPELISRN 244
+H DI N+L+ N K+ DFGL+++ D A++G I ++APE I N
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTXXKASKGKLPIKWMAPESI--N 185
Query: 245 FGTVSCKSDVYGFGMVLLEM 264
F + SDV+ FG+ + E+
Sbjct: 186 FRRFTSASDVWMFGVCMWEI 205
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVVQLLG 127
LG+GGFG V Q++ TG + A K LE + + +NE + +++ VV L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
LV M G L H++ + + AR + Y C C
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIY------------HMGQAGFPEARAVFYAAEIC--C 297
Query: 188 ---------ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
I++ D+KP NILLD + ++SD GLA P+ +I GT+GY+AP
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAP 354
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
E++ T S D + G +L EM G+
Sbjct: 355 EVVKNERYTFS--PDWWALGCLLYEMIAGQ 382
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 61 QIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHV 120
+ IA ++G+G +G V+ G+ + G +AVK+ ++ ++ E+ + H
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHE 91
Query: 121 NVVQLLGFCSEGS----KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARG 176
N++ + +G+ + L+ +Y NGSL ++ + +L + + ++A + G
Sbjct: 92 NILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSG 146
Query: 177 IEYLHNGC-----DVCILHFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISATR 230
+ +LH I H D+K NIL+ N ++D GLA KF N+ TR
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR 206
Query: 231 -GTIGYIAPEL----ISRNFGTVSCKSDVYGFGMVLLEMA 265
GT Y+ PE+ ++RN +D+Y FG++L E+A
Sbjct: 207 VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVVQLLG 127
LG+GGFG V Q++ TG + A K LE + + +NE + +++ VV L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
LV M G L H++ + + AR + Y C C
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIY------------HMGQAGFPEARAVFYAAEIC--C 297
Query: 188 ---------ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
I++ D+KP NILLD + ++SD GLA P+ +I GT+GY+AP
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAP 354
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
E++ T S D + G +L EM G+
Sbjct: 355 EVVKNERYTFS--PDWWALGCLLYEMIAGQ 382
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 29/208 (13%)
Query: 71 HKLGQGGFGSVYKG-QLQTGGLIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G FG V+KG +T ++A+K+++ ++ E+ E++ + + V + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFP---KESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ +K ++ EY+ GS + P E++ ++ E L +G++YLH+
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL--------KGLDYLHSEK 124
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPEL 240
+ H DIK N+LL + K++DFG+A K N FV GT ++APE+
Sbjct: 125 KI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV------GTPFWMAPEV 175
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
I ++ K+D++ G+ +E+A G
Sbjct: 176 IKQS--AYDSKADIWSLGITAIELARGE 201
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 73 LGQGGFGSVYKGQLQT----GGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G +E ++ E G L + + R SL L A + + YL +
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESKR-- 511
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 512 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 567
Query: 247 TVSCKSDVYGFGMVLLEM 264
+ SDV+ FG+ + E+
Sbjct: 568 RFTSASDVWMFGVCMWEI 585
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 23/199 (11%)
Query: 72 KLGQGGFGSVY--KGQLQTGGLIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVVQL 125
KLG G +G V K +L TG A+K+++ S + ++EV+ + ++ H N+++L
Sbjct: 28 KLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
F + LV E G L + ++ + + +V GT YLH
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT----YLHKHN- 141
Query: 186 VCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
I+H D+KP N+LL+ + + K+ DFGL+ + GT YIAPE++
Sbjct: 142 --IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERLGTAYYIAPEVLR 196
Query: 243 RNFGTVSCKSDVYGFGMVL 261
+ + K DV+ G++L
Sbjct: 197 KKYDE---KCDVWSCGVIL 212
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 29/208 (13%)
Query: 71 HKLGQGGFGSVYKG-QLQTGGLIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G FG V+KG +T ++A+K+++ ++ E+ E++ + + V + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFP---KESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ +K ++ EY+ GS + P E++ ++ E L +G++YLH+
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL--------KGLDYLHSEK 124
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPEL 240
+ H DIK N+LL + K++DFG+A K N FV GT ++APE+
Sbjct: 125 KI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPEV 175
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
I ++ K+D++ G+ +E+A G
Sbjct: 176 IKQS--AYDSKADIWSLGITAIELARGE 201
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 18/181 (9%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFC 129
LGQG +V++G+ +TG L A+K+ N F + + E + +++H N+V+L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 130 SEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL-HNGCDV 186
E + R L+ E+ P GSL V + S L + V G+ +L NG
Sbjct: 77 EETTTRHKVLIMEFCPCGSL-YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--- 132
Query: 187 CILHFDIKPHNILL----DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
I+H +IKP NI+ D + K++DFG A+ + FVS+ GT Y+ P++
Sbjct: 133 -IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY---GTEEYLHPDMYE 188
Query: 243 R 243
R
Sbjct: 189 R 189
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 134 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+++D KV+DF
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
L G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 135
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 196 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 244
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 245 TID------VYMIMVKCWMIDADSRPKFRELI 270
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 139
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 200 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 248
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 249 TID------VYMIMVKCWMIDADSRPKFRELI 274
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
L G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 90 LGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 142
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 203 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 251
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 252 TID------VYMIMVKCWMIDADSRPKFRELI 277
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 29/208 (13%)
Query: 71 HKLGQGGFGSVYKG-QLQTGGLIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G FG V+KG +T ++A+K+++ ++ E+ E++ + + V + G
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFP---KESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ +K ++ EY+ GS + P E++ ++ E L +G++YLH+
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL--------KGLDYLHSEK 144
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPEL 240
+ H DIK N+LL + K++DFG+A K N FV GT ++APE+
Sbjct: 145 KI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV------GTPFWMAPEV 195
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
I ++ K+D++ G+ +E+A G
Sbjct: 196 IKQS--AYDSKADIWSLGITAIELARGE 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 137
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 198 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 246
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 247 TID------VYMIMVKCWMIDADSRPKFRELI 272
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 29/207 (14%)
Query: 72 KLGQGGFGSVYKG-QLQTGGLIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
K+G+G FG V+KG +T ++A+K+++ ++ E+ E++ + + V + G
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 88
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFP---KESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+ +K ++ EY+ GS + P E++ ++ E L +G++YLH+
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL--------KGLDYLHSEKK 140
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPELI 241
+ H DIK N+LL + K++DFG+A K N FV GT ++APE+I
Sbjct: 141 I---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPEVI 191
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGGR 268
++ K+D++ G+ +E+A G
Sbjct: 192 KQS--AYDSKADIWSLGITAIELARGE 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 135
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 196 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 244
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 245 TID------VYMIMVKCWMIDADSRPKFRELI 270
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 127
+LG+G +G V K + + +G ++AVK + + S E+ ++ ++ + V G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ E M + SLD+ +GQ++ + L ++A+ + +E+LH+ +
Sbjct: 74 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LS 130
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
++H D+KP N+L++ K+ DFG++ + D V+ G Y+APE I+
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYL---VDDVAKDIDAGCKPYMAPERINPELNQ 187
Query: 248 --VSCKSDVYGFGMVLLEMA 265
S KSD++ G+ ++E+A
Sbjct: 188 KGYSVKSDIWSLGITMIELA 207
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
L G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 142
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 203 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 251
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 252 TID------VYMIMVKCWMIDADSRPKFRELI 277
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 42 IEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVKML 97
+++FL + K++ P Q A + F LG G FG V ++TG A+K+L
Sbjct: 1 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 60
Query: 98 ENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFP 153
+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 61 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-- 118
Query: 154 KESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGL 213
R A EYLH+ + +++ D+KP N+L+D +V+DFG
Sbjct: 119 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 173
Query: 214 AKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
AK K + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 174 AK-RVKGRTWTLC----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 220
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 37/220 (16%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVK--MLENSKFSAEEFINEVSTIGRIHHVNVVQLL-GF 128
LG+GGFG V++ + + A+K L N + + E+ + EV + ++ H +V+ +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 129 CSEGSKRAL------VYEYMPNGSLDRHVFPK--------ESRGQSLCWEKLHEVALGTA 174
+ + L VY Y+ + E R +S+C LH + L A
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC---LH-IFLQIA 128
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND----------FV 224
+E+LH+ ++H D+KP NI + + KV DFGL ++ + +
Sbjct: 129 EAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ GT Y++PE I N + S K D++ G++L E+
Sbjct: 186 RHTGQVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFEL 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 73 LGQGGFGSVYKGQLQTGG-----LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 125
LG G FG+VYKG G +A+K L S + +E ++E + + + +V +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
LG C + + L+ + MP G L +V ++ + L + A+G+ YL D
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLE---D 142
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 246 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303
T +SDV+ +G+ + E+ G + + A+ S L KG L +
Sbjct: 203 YT--HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---------LEKGERLPQPPIC 251
Query: 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335
I+ + MI + C + A RP +++
Sbjct: 252 TID------VYMIMVKCWMIDADSRPKFRELI 277
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 28/275 (10%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAV-KMLENSKFSAEE---FINEVSTIGRIHHVNVVQLL 126
+ +G G +G K + ++ G I V K L+ + E ++EV+ + + H N+V+
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 127 GFCSEGSKRAL--VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ + L V EY G L + Q L E + V ++ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 185 D--VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
D +LH D+KP N+ LD K+ DFGLA+ + F A GT Y++PE ++
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA--KAFVGTPYYMSPEQMN 189
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWV-YDQLNKGGDLELQN 301
R + + KSD++ G +L E+ A P + + Q G +
Sbjct: 190 RM--SYNEKSDIWSLGCLLYELC---------------ALMPPFTAFSQKELAGKIREGK 232
Query: 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336
I + +L I + +K RPS+ ++LE
Sbjct: 233 FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL-LGXKY 180
Query: 248 VSCKSDVYGFGMVLLEMAGGR 268
S D++ G + EM R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 73 VIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR--- 123
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 175
Query: 248 VSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V +TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V +TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V +TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 175
Query: 248 VSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 174
Query: 248 VSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 71 HKLGQGGFG-SVYKGQLQTGGLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLL 126
K+G+G FG ++ + G +K + S+ S+ EE EV+ + + H N+VQ
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
E +V +Y G L + + +G +++ + + ++++H D
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDWFVQICLALKHVH---DR 144
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS-ATRGTIGYIAPELISRNF 245
ILH DIK NI L + ++ DFG+A+ N V ++ A GT Y++PE+
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARVL---NSTVELARACIGTPYYLSPEICENK- 200
Query: 246 GTVSCKSDVYGFGMVLLEM 264
+ KSD++ G VL E+
Sbjct: 201 -PYNNKSDIWALGCVLYEL 218
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 31/229 (13%)
Query: 48 NQQSW-MPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKF 102
N+ +W +PK Y P TH +G G +GSV ++G +A+K L S+
Sbjct: 34 NKTAWELPKTYVSP---------TH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI 83
Query: 103 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY---MPNGSLDRHVFPKESRGQ 159
A+ E+ + + H NV+ LL + S Y++ MP D ++ G
Sbjct: 84 FAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL----QKIMGM 139
Query: 160 SLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219
EK+ + +G++Y+H+ ++H D+KP N+ ++ + K+ DFGLA+
Sbjct: 140 EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA 196
Query: 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
E ++ T Y APE+I ++ + D++ G ++ EM G+
Sbjct: 197 E-----MTGYVVTRWYRAPEVI-LSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 102/237 (43%), Gaps = 44/237 (18%)
Query: 68 HFTHKLGQGGFGSVYKGQLQ-TGGLIAVKML--ENSKFSAEEFINEVSTIGRIHHVNVVQ 124
+LG GGFG V + Q TG +A+K E S + E + E+ + +++H NVV
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 125 LLGFCSEGSKRA------LVYEYMPNGSLDRHVFPKESRGQSLCWEK---LHEVALGTAR 175
K A L EY G L +++ ++ ++ C K + + +
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL----NQFENCCGLKEGPIRTLLSDISS 132
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKE---NDFVSISAT 229
+ YLH I+H D+KP NI+L I K+ D G AK + +FV
Sbjct: 133 ALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV----- 184
Query: 230 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSW 286
GT+ Y+APEL+ + TV+ D + FG + E G R + P+W
Sbjct: 185 -GTLQYLAPELLEQKKYTVTV--DYWSFGTLAFECITGFR-----------PFLPNW 227
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 77 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 130
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL-LGXKY 187
Query: 248 VSCKSDVYGFGMVLLEMAGGR 268
S D++ G + EM R
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRR 208
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 102/237 (43%), Gaps = 44/237 (18%)
Query: 68 HFTHKLGQGGFGSVYKGQLQ-TGGLIAVKML--ENSKFSAEEFINEVSTIGRIHHVNVVQ 124
+LG GGFG V + Q TG +A+K E S + E + E+ + +++H NVV
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 125 LLGFCSEGSKRA------LVYEYMPNGSLDRHVFPKESRGQSLCWEK---LHEVALGTAR 175
K A L EY G L +++ ++ ++ C K + + +
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL----NQFENCCGLKEGPIRTLLSDISS 133
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKE---NDFVSISAT 229
+ YLH I+H D+KP NI+L I K+ D G AK + +FV
Sbjct: 134 ALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV----- 185
Query: 230 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSW 286
GT+ Y+APEL+ + TV+ D + FG + E G R + P+W
Sbjct: 186 -GTLQYLAPELLEQKKYTVTV--DYWSFGTLAFECITGFR-----------PFLPNW 228
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 174
Query: 248 VSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 71 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 124
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 176
Query: 248 VSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 175
Query: 248 VSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 74 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 127
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 179
Query: 248 VSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 41 NIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVKM 96
++++FL + K++ P Q A + F LG G FG V +TG A+K+
Sbjct: 7 DVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI 66
Query: 97 LENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVF 152
L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 67 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 125
Query: 153 PKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFG 212
R A EYLH+ + +++ D+KP N+L+D +V+DFG
Sbjct: 126 ---RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFG 179
Query: 213 LAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 180 FAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 227
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 77 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 130
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 182
Query: 248 VSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V +TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 28/275 (10%)
Query: 71 HKLGQGGFGSVYKGQLQTGGLIAV-KMLENSKFSAEE---FINEVSTIGRIHHVNVVQLL 126
+ +G G +G K + ++ G I V K L+ + E ++EV+ + + H N+V+
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 127 GFCSEGSKRAL--VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ + L V EY G L + Q L E + V ++ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 185 D--VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
D +LH D+KP N+ LD K+ DFGLA+ + F GT Y++PE ++
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV--GTPYYMSPEQMN 189
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWV-YDQLNKGGDLELQN 301
R + + KSD++ G +L E+ A P + + Q G +
Sbjct: 190 RM--SYNEKSDIWSLGCLLYELC---------------ALMPPFTAFSQKELAGKIREGK 232
Query: 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336
I + +L I + +K RPS+ ++LE
Sbjct: 233 FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ + +L + S +V EY P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+++D KV+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 186
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V +TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+++D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 69 VIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 174
Query: 248 VSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ + +L + S +V EY P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+++D KV+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 186
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V +TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+++D KV+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 186
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 71 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 124
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 176
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 177 --LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V +TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 41 NIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVKM 96
++++FL + K++ P Q A + F LG G FG V +TG A+K+
Sbjct: 7 DVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI 66
Query: 97 LENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVF 152
L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 67 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 125
Query: 153 PKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFG 212
R A EYLH+ + +++ D+KP N+L+D +V+DFG
Sbjct: 126 ---RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFG 179
Query: 213 LAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 180 FAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 227
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 26/204 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAE----EFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q ++A+K+L S+ E + E+ + H N++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 128 FCSEGSKRALVYEYMPNGSL----DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+ + + L+ E+ P G L +H E R + E A + Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE--------LADALHYCH-- 131
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
+ ++H DIKP N+L+ + K++DFG + P + GT+ Y+ PE+I
Sbjct: 132 -ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEMIEG 186
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGG 267
T K D++ G++ E G
Sbjct: 187 K--THDEKVDLWCAGVLCYEFLVG 208
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 174
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 175 --LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 73 LGQGGFGSVYKGQLQT----GGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G +E ++ E G L + + R SL L A + + YL +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H DI N+L+ K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 132 -FVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 187
Query: 247 TVSCKSDVYGFGMVLLEM 264
+ SDV+ FG+ + E+
Sbjct: 188 RFTSASDVWMFGVCMWEI 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 18/215 (8%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI- 117
P++ + LG+G FG V + TG A+K+L A++ + T R+
Sbjct: 5 PKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 64
Query: 118 ---HHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTA 174
H + L + V EY G L H+ SR + E+
Sbjct: 65 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIV 120
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 234
+EYLH+ +++ DIK N++LD + K++DFGL K +D ++ GT
Sbjct: 121 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPE 175
Query: 235 YIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGR 268
Y+APE++ N +G D +G G+V+ EM GR
Sbjct: 176 YLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGR 207
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 174
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 175 --LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 31/229 (13%)
Query: 48 NQQSW-MPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKF 102
N+ +W +PK Y P TH +G G +GSV ++G +A+K L S+
Sbjct: 16 NKTAWELPKTYVSP---------TH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI 65
Query: 103 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY---MPNGSLDRHVFPKESRGQ 159
A+ E+ + + H NV+ LL + S Y++ MP D ++ G
Sbjct: 66 FAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL----QKIMGL 121
Query: 160 SLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219
EK+ + +G++Y+H+ ++H D+KP N+ ++ + K+ DFGLA+
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA 178
Query: 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
E ++ T Y APE+I ++ + D++ G ++ EM G+
Sbjct: 179 E-----MTGYVVTRWYRAPEVI-LSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 73 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 72 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 125
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 177
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 178 --LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V +TG A+K
Sbjct: 34 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 93
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 153
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 154 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 206
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 207 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 255
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFLHQDLKD---FMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 26/204 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAE----EFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q ++A+K+L S+ E + E+ + H N++++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 128 FCSEGSKRALVYEYMPNGSL----DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+ + + L+ E+ P G L +H E R + E A + Y H
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE--------LADALHYCH-- 132
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
+ ++H DIKP N+L+ + K++DFG + P + GT+ Y+ PE+I
Sbjct: 133 -ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEMIEG 187
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGG 267
T K D++ G++ E G
Sbjct: 188 K--THDEKVDLWCAGVLCYEFLVG 209
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 73 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ + +L + S +V EY P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+++D KV+DF
Sbjct: 134 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 186
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLGF 128
LG+G FG V K + + T AVK++ + ++ + EV + ++ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
+ S +V E G L + ++ + + +V GI Y+H I
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVF----SGITYMHKHN---I 142
Query: 189 LHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
+H D+KP NILL + + K+ DFGL+ + + GT YIAPE++
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLR--- 196
Query: 246 GTVSCKSDVYGFGMVLLEMAGG 267
GT K DV+ G++L + G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 72 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 125
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 177
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 178 --LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 74 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 127
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 179
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 180 --LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 26/204 (12%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAE----EFINEVSTIGRIHHVNVVQLLG 127
LG+G FG+VY + Q ++A+K+L S+ E + E+ + H N++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 128 FCSEGSKRALVYEYMPNGSL----DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
+ + + L+ E+ P G L +H E R + E A + Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE--------LADALHYCH-- 131
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 243
+ ++H DIKP N+L+ + K++DFG + P + GT+ Y+ PE+I
Sbjct: 132 -ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEMIEG 186
Query: 244 NFGTVSCKSDVYGFGMVLLEMAGG 267
T K D++ G++ E G
Sbjct: 187 K--THDEKVDLWCAGVLCYEFLVG 208
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKML----ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G +G V++G Q G +AVK+ E S F E N V + H N+ LGF
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM----LRHENI---LGF 67
Query: 129 CSE-------GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+ ++ L+ Y GSL ++ + +L + L A G+ +LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 182 -----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI--SATRGTIG 234
I H D+K NIL+ N ++D GLA H + + + + + GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 235 YIAPELISRNFGTVSC-----KSDVYGFGMVLLEMA 265
Y+APE++ V C + D++ FG+VL E+A
Sbjct: 183 YMAPEVLDETI-QVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 71 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 124
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 176
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 177 --LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 71 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 124
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 176
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 177 --LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 73 LGQGGFGSVY--KGQLQTGGLIAVKMLEN----SKFSAEEFINEVSTIGRIHHVNVVQLL 126
LG+G FG V K ++ TG AVK++ K E + EV + ++ H N+++L
Sbjct: 34 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
F + LV E G L + ++ + + +V GI Y+H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL----SGITYMHKNK-- 146
Query: 187 CILHFDIKPHNILL-----DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 241
I+H D+KP N+LL D N ++ DFGL+ + GT YIAPE++
Sbjct: 147 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVL 200
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGG 267
GT K DV+ G++L + G
Sbjct: 201 H---GTYDEKCDVWSTGVILYILLSG 223
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 43/284 (15%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLGFC 129
+G+G FG VY G+ G +A+++++ + + ++ F EV + H NVV +G C
Sbjct: 41 IGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWE--KLHEVALGTARGIEYLHNGCDVC 187
A++ +L V R + + K ++A +G+ YLH
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVV-----RDAKIVLDVNKTRQIAQEIVKGMGYLHAKG--- 150
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHP-----KENDFVSISATRGTIGYIAPELIS 242
ILH D+K N+ D+ + ++DFGL + D + I G + ++APE+I
Sbjct: 151 ILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQ--NGWLCHLAPEIIR 207
Query: 243 R-------NFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295
+ + S SDV+ G + E+ ++ ++ A W Q+ G
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYEL-----HAREWPFKTQPAEAIIW---QMGTGM 259
Query: 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339
L + + +++ I L+C + +RP+ TK+++MLE
Sbjct: 260 KPNLSQIG-----MGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 72 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 125
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 177
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 178 --LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKML----ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G +G V++G Q G +AVK+ E S F E N V + H N+ LGF
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTV----MLRHENI---LGF 96
Query: 129 CSE-------GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+ ++ L+ Y GSL ++ + +L + L A G+ +LH
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLH 151
Query: 182 -----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI--SATRGTIG 234
I H D+K NIL+ N ++D GLA H + + + + + GT
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 211
Query: 235 YIAPELISRNFGTVSC-----KSDVYGFGMVLLEMA 265
Y+APE++ V C + D++ FG+VL E+A
Sbjct: 212 YMAPEVLDETI-QVDCFDSYKRVDIWAFGLVLWEVA 246
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKML----ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G +G V++G Q G +AVK+ E S F E N V + H N+ LGF
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM----LRHENI---LGF 67
Query: 129 CSE-------GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+ ++ L+ Y GSL ++ + +L + L A G+ +LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 182 -----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI--SATRGTIG 234
I H D+K NIL+ N ++D GLA H + + + + + GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 235 YIAPELISRNFGTVSC-----KSDVYGFGMVLLEMA 265
Y+APE++ V C + D++ FG+VL E+A
Sbjct: 183 YMAPEVLDETI-QVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKF------SAEEFINEVSTIGRIHHVNVVQL 125
+G+G F V + +TG AVK+++ +KF S E+ E S + H ++V+L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
L S +V+E+M L + + G + Y H D
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 148
Query: 186 VCILHFDIKPHNILL--DHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
I+H D+KP N+LL N P K+ DFG+A E+ V+ GT ++APE++
Sbjct: 149 NNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVA-GGRVGTPHFMAPEVVK 206
Query: 243 RN-FGTVSCKSDVYGFGMVLLEMAGG 267
R +G DV+G G++L + G
Sbjct: 207 REPYGK---PVDVWGCGVILFILLSG 229
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 38/243 (15%)
Query: 73 LGQGGFGSVYKGQLQTGG-LIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
LGQG FG V K + A+K + +++ ++EV + ++H VV+ E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 132 G----------SKRALVY---EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
K++ ++ EY NG+L + + Q + +L L +
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL---EALS 130
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV------------SI 226
Y+H+ I+H D+KP NI +D + K+ DFGLAK + D + ++
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-----AGGRRNSNMNATRSSKA 281
++ GT Y+A E++ G + K D+Y G++ EM G R + + RS
Sbjct: 188 TSAIGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSI 246
Query: 282 YFP 284
FP
Sbjct: 247 EFP 249
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 73 LGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 127
LG+G FG V + TG A+K+L A++ + T R+ H + L
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 75
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ V EY G L H+ SR + E+ +EYLH+
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD--- 128
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 246
+++ DIK N++LD + K++DFGL K +D ++ GT Y+APE++ N +G
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYG 186
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D +G G+V+ EM GR
Sbjct: 187 RA---VDWWGLGVVMYEMMCGR 205
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 37/234 (15%)
Query: 63 IAMTNHFTHKL-GQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHV 120
+ M + H++ G+GGFG VY + TG + A+K L+ + ++ G +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--------GETLAL 237
Query: 121 NVVQLLGFCSEGS---------------KRALVYEYMPNGSLDRHVFPKESRGQSLCWEK 165
N +L S G K + + + M G L H+ S+
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEAD 293
Query: 166 LHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 225
+ A G+E++HN +++ D+KP NILLD + ++SD GLA K+ S
Sbjct: 294 MRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 226 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSS 279
+ GT GY+APE++ + S +D + G +L ++ G + T+
Sbjct: 351 V----GTHGYMAPEVLQKGVAYDS-SADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 37/234 (15%)
Query: 63 IAMTNHFTHKL-GQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHV 120
+ M + H++ G+GGFG VY + TG + A+K L+ + ++ G +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--------GETLAL 237
Query: 121 NVVQLLGFCSEGS---------------KRALVYEYMPNGSLDRHVFPKESRGQSLCWEK 165
N +L S G K + + + M G L H+ S+
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEAD 293
Query: 166 LHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 225
+ A G+E++HN +++ D+KP NILLD + ++SD GLA K+ S
Sbjct: 294 MRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 226 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSS 279
+ GT GY+APE++ + S +D + G +L ++ G + T+
Sbjct: 351 V----GTHGYMAPEVLQKGVAYDS-SADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 30/229 (13%)
Query: 73 LGQGGFG---SVYKGQLQTGGLIAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQL 125
+G+G +G S Y +T +A+K + S F + + + E+ + R H NV+ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTR--VAIKKI--SPFEHQTYCQRTLREIQILLRFRHENVIGI 106
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
+ A+ Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 107 RDILRASTLEAMRDVYIVQDLMETDLY-KLLKSQQLSNDHICYFLYQILRGLKYIHSAN- 164
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRN 244
+LH D+KP N+L++ K+ DFGLA+ E+D ++ T Y APE++ +
Sbjct: 165 --VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNS 222
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVY-DQLN 292
G D++ G +L EM S++ FP Y DQLN
Sbjct: 223 KGYTK-SIDIWSVGCILAEML------------SNRPIFPGKHYLDQLN 258
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 37/234 (15%)
Query: 63 IAMTNHFTHKL-GQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHV 120
+ M + H++ G+GGFG VY + TG + A+K L+ + ++ G +
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--------GETLAL 236
Query: 121 NVVQLLGFCSEGS---------------KRALVYEYMPNGSLDRHVFPKESRGQSLCWEK 165
N +L S G K + + + M G L H+ S+
Sbjct: 237 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEAD 292
Query: 166 LHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 225
+ A G+E++HN +++ D+KP NILLD + ++SD GLA K+ S
Sbjct: 293 MRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 349
Query: 226 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSS 279
+ GT GY+APE++ + S +D + G +L ++ G + T+
Sbjct: 350 V----GTHGYMAPEVLQKGVAYDSS-ADWFSLGCMLFKLLRGHSPFRQHKTKDK 398
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 73 LGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 127
LG+G FG V + TG A+K+L A++ + T R+ H + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ V EY G L H+ SR + E+ +EYLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD--- 125
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 246
+++ DIK N++LD + K++DFGL K +D ++ GT Y+APE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 73 LGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 127
LG+G FG V + TG A+K+L A++ + T R+ H + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ V EY G L H+ SR + E+ +EYLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD--- 125
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 246
+++ DIK N++LD + K++DFGL K +D ++ GT Y+APE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 72 KLGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + G L +++ ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 175
Query: 248 VSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 72 KLGQGGFGSVYKGQLQTGG----LIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + G L +++ ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 174
Query: 248 VSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHF--THKLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V +TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE ++ +V+L + S +V EY P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL 133
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D KV+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADF 186
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 73 LGQGGFGSVYKGQLQT----GGLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
G +E ++ E G L + + R SL L A + + YL +
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESKR-- 511
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H DI N+L+ K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 512 -FVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 567
Query: 247 TVSCKSDVYGFGMVLLEM 264
+ SDV+ FG+ + E+
Sbjct: 568 RFTSASDVWMFGVCMWEI 585
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 127
K+G+G +G VYK + + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+K LV+E++ D F S + + +G+ + H+
Sbjct: 73 VIHTENKLYLVFEHVDQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 245
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 246 GTVSCK-----SDVYGFGMVLLEMAGGR 268
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 37/234 (15%)
Query: 63 IAMTNHFTHKL-GQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHV 120
+ M + H++ G+GGFG VY + TG + A+K L+ + ++ G +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--------GETLAL 237
Query: 121 NVVQLLGFCSEGS---------------KRALVYEYMPNGSLDRHVFPKESRGQSLCWEK 165
N +L S G K + + + M G L H+ S+
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEAD 293
Query: 166 LHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 225
+ A G+E++HN +++ D+KP NILLD + ++SD GLA K+ S
Sbjct: 294 MRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 226 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSS 279
+ GT GY+APE++ + S +D + G +L ++ G + T+
Sbjct: 351 V----GTHGYMAPEVLQKGVAYDSS-ADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 73 LGQGGFGSVY--KGQLQTGGLIAVKMLEN----SKFSAEEFINEVSTIGRIHHVNVVQLL 126
LG+G FG V K ++ TG AVK++ K E + EV + ++ H N+++L
Sbjct: 40 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
F + LV E G L + ++ + + +V GI Y+H
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL----SGITYMHKNK-- 152
Query: 187 CILHFDIKPHNILL-----DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 241
I+H D+KP N+LL D N ++ DFGL+ + GT YIAPE++
Sbjct: 153 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVL 206
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGG 267
GT K DV+ G++L + G
Sbjct: 207 H---GTYDEKCDVWSTGVILYILLSG 229
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 73 LGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 127
LG+G FG V + TG A+K+L A++ + T R+ H + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ V EY G L H+ SR + E+ +EYLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD--- 125
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 246
+++ DIK N++LD + K++DFGL K +D ++ GT Y+APE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 104/264 (39%), Gaps = 77/264 (29%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 124 QLLG--------------FCSEG-------SKRALVYEYMPNGS---------------- 146
LLG FC G SKR Y G+
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 149
Query: 147 --------------------------LDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
++ P++ L E L + A+G+E+L
Sbjct: 150 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 209
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 240
CI H D+ NILL + K+ DFGLA+ K+ D+V R + ++APE
Sbjct: 210 --ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET 266
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM 264
I T+ +SDV+ FG++L E+
Sbjct: 267 IFDRVYTI--QSDVWSFGVLLWEI 288
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLGF 128
LG+G FG V K + + T AVK++ + ++ + EV + ++ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
+ S +V E G L + ++ + + +V GI Y+H I
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVF----SGITYMHKHN---I 142
Query: 189 LHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
+H D+KP NILL + + K+ DFGL+ + + GT YIAPE++
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLR--- 196
Query: 246 GTVSCKSDVYGFGMVLLEMAGG 267
GT K DV+ G++L + G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLGF 128
LG+G FG V K + + T AVK++ + ++ + EV + ++ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
+ S +V E G L + ++ + + +V GI Y+H I
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVF----SGITYMHKHN---I 142
Query: 189 LHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 245
+H D+KP NILL + + K+ DFGL+ + + GT YIAPE++
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLR--- 196
Query: 246 GTVSCKSDVYGFGMVLLEMAGG 267
GT K DV+ G++L + G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 73 LGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 127
LG+G FG V + TG A+K+L A++ + T R+ H + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ V EY G L H+ SR + E+ +EYLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD--- 125
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 246
+++ DIK N++LD + K++DFGL K +D ++ GT Y+APE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 104/264 (39%), Gaps = 77/264 (29%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 124 QLLG--------------FCSEG-------SKRALVYEYMPNGS---------------- 146
LLG FC G SKR Y G+
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 154
Query: 147 --------------------------LDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
++ P++ L E L + A+G+E+L
Sbjct: 155 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 214
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 240
CI H D+ NILL + K+ DFGLA+ K+ D+V R + ++APE
Sbjct: 215 --ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET 271
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM 264
I T+ +SDV+ FG++L E+
Sbjct: 272 IFDRVYTI--QSDVWSFGVLLWEI 293
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 104/264 (39%), Gaps = 77/264 (29%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 124 QLLG--------------FCSEG-------SKRALVYEYMPNGS---------------- 146
LLG FC G SKR Y G+
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 147
Query: 147 --------------------------LDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
++ P++ L E L + A+G+E+L
Sbjct: 148 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 207
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 240
CI H D+ NILL + K+ DFGLA+ K+ D+V R + ++APE
Sbjct: 208 --ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET 264
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM 264
I T+ +SDV+ FG++L E+
Sbjct: 265 IFDRVYTI--QSDVWSFGVLLWEI 286
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 73 LGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 127
LG+G FG V + TG A+K+L A++ + T R+ H + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ V EY G L H+ SR + E+ +EYLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD--- 125
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 246
+++ DIK N++LD + K++DFGL K +D ++ GT Y+APE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 73 LGQGGFGSVY--KGQLQTGGLIAVKMLEN----SKFSAEEFINEVSTIGRIHHVNVVQLL 126
LG+G FG V K ++ TG AVK++ K E + EV + ++ H N+++L
Sbjct: 57 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
F + LV E G L + ++ + + +V GI Y+H
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL----SGITYMHKNK-- 169
Query: 187 CILHFDIKPHNILL-----DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 241
I+H D+KP N+LL D N ++ DFGL+ + GT YIAPE++
Sbjct: 170 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVL 223
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGG 267
GT K DV+ G++L + G
Sbjct: 224 ---HGTYDEKCDVWSTGVILYILLSG 246
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 104/264 (39%), Gaps = 77/264 (29%)
Query: 73 LGQGGFGSVYKG------QLQTGGLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 123
LG+G FG V + + T +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 124 QLLG--------------FCSEG-------SKRALVYEYMPNGS---------------- 146
LLG FC G SKR Y G+
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 156
Query: 147 --------------------------LDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
++ P++ L E L + A+G+E+L
Sbjct: 157 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 216
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 240
CI H D+ NILL + K+ DFGLA+ K+ D+V R + ++APE
Sbjct: 217 --ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET 273
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEM 264
I T+ +SDV+ FG++L E+
Sbjct: 274 IFDRVYTI--QSDVWSFGVLLWEI 295
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 73 LGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 127
LG+G FG V + TG A+K+L+ A++ + T R+ H + L
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 215
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ V EY G L H+ SR + ++ ++YLH+ +V
Sbjct: 216 SFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHSEKNV- 270
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 246
++ D+K N++LD + K++DFGL K K D ++ GT Y+APE++ N +G
Sbjct: 271 -VYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKTFCGTPEYLAPEVLEDNDYG 327
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D +G G+V+ EM GR
Sbjct: 328 RA---VDWWGLGVVMYEMMCGR 346
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 73 LGQGGFGSVY--KGQLQTGGLIAVKMLEN----SKFSAEEFINEVSTIGRIHHVNVVQLL 126
LG+G FG V K ++ TG AVK++ K E + EV + ++ H N+++L
Sbjct: 58 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
F + LV E G L + ++ + + +V GI Y+H
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL----SGITYMHKNK-- 170
Query: 187 CILHFDIKPHNILL-----DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 241
I+H D+KP N+LL D N ++ DFGL+ + GT YIAPE++
Sbjct: 171 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVL 224
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGG 267
GT K DV+ G++L + G
Sbjct: 225 ---HGTYDEKCDVWSTGVILYILLSG 247
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFIN-----EVSTIGRIHHVNVVQLL 126
LG+G FG V TG +A+K++ N K A+ + E+S + + H ++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKII-NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 80
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ +V EY N D ++ ++ + ++ +EY H
Sbjct: 81 DVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQII----SAVEYCHRHK-- 133
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
I+H D+KP N+LLD + K++DFGL+ N F+ S G+ Y APE+IS
Sbjct: 134 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSC--GSPNYAAPEVISGKL- 188
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
+ DV+ G++L M R
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRR 210
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFIN-----EVSTIGRIHHVNVVQLL 126
LG+G FG V TG +A+K++ N K A+ + E+S + + H ++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKII-NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 70
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ +V EY N D ++ ++ + ++ +EY H
Sbjct: 71 DVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQII----SAVEYCHRHK-- 123
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
I+H D+KP N+LLD + K++DFGL+ + +F+ S G+ Y APE+IS
Sbjct: 124 -IVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSC--GSPNYAAPEVISGKL- 178
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
+ DV+ G++L M R
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRR 200
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFIN-----EVSTIGRIHHVNVVQLL 126
LG+G FG V TG +A+K++ N K A+ + E+S + + H ++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKII-NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 79
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ +V EY N D ++ ++ + ++ +EY H
Sbjct: 80 DVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQII----SAVEYCHRHK-- 132
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
I+H D+KP N+LLD + K++DFGL+ N F+ S G+ Y APE+IS
Sbjct: 133 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSC--GSPNYAAPEVISGKL- 187
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
+ DV+ G++L M R
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRR 209
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 73 LGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 127
LG+G FG V + TG A+K+L+ A++ + T R+ H + L
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 218
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ V EY G L H+ SR + ++ ++YLH+ +V
Sbjct: 219 SFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHSEKNV- 273
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 246
++ D+K N++LD + K++DFGL K K D ++ GT Y+APE++ N +G
Sbjct: 274 -VYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKTFCGTPEYLAPEVLEDNDYG 330
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D +G G+V+ EM GR
Sbjct: 331 RA---VDWWGLGVVMYEMMCGR 349
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 22/157 (14%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKML----ENSKFSAEEFINEVSTIGRIH-HVNV 122
KLG+G +G V+K +TG ++AVK + +NS A+ E+ + + H N+
Sbjct: 13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNST-DAQRTFREIMILTELSGHENI 71
Query: 123 VQLLGFCSEGSKRA--LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHE--VALGTARGIE 178
V LL + R LV++YM D H + + E +H+ V + I+
Sbjct: 72 VNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRAN-----ILEPVHKQYVVYQLIKVIK 123
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215
YLH+G +LH D+KP NILL+ KV+DFGL++
Sbjct: 124 YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 17/215 (7%)
Query: 60 PQIIAMTNHFTHKLGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI- 117
P++ + LG+G FG V + TG A+K+L+ A++ + T R+
Sbjct: 5 PRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 64
Query: 118 ---HHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTA 174
H + L + V EY G L H+ SR + ++
Sbjct: 65 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIV 120
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 234
++YLH+ +V ++ D+K N++LD + K++DFGL K K D ++ GT
Sbjct: 121 SALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPE 176
Query: 235 YIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGR 268
Y+APE++ N +G D +G G+V+ EM GR
Sbjct: 177 YLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGR 208
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 30/209 (14%)
Query: 73 LGQGGFGSVYKGQ----LQTGGLIAVKMLE------NSKFSAEEFINEVSTIGRIHHVNV 122
LG+GG+G V++ + TG + A+K+L+ N+K +A E + + + H +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT-KAERNILEEVKHPFI 83
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG----QSLCWEKLHEVALGTARGIE 178
V L+ G K L+ EY+ G L + E G + C+ L E+++ +
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACF-YLAEISMA----LG 135
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+LH I++ D+KP NI+L+H K++DFGL K +D GTI Y+AP
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAP 190
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ R+ + D + G ++ +M G
Sbjct: 191 EILMRSGHNRAV--DWWSLGALMYDMLTG 217
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G F V + + TG +AVK+++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
LV EY G + ++ + K ++ ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELIS-RN 244
+H D+K N+LLD + K++DFG + N+F + A G Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 245 FGTVSCKSDVYGFGMVLLEMAGG 267
+ + DV+ G++L + G
Sbjct: 189 YD--GPEVDVWSLGVILYTLVSG 209
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFIN-----EVSTIGRIHHVNVVQLL 126
LG+G FG V TG +A+K++ N K A+ + E+S + + H ++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKII-NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 74
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ +V EY N D ++ ++ + ++ +EY H
Sbjct: 75 DVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQII----SAVEYCHRHK-- 127
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
I+H D+KP N+LLD + K++DFGL+ + +F+ S G+ Y APE+IS
Sbjct: 128 -IVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSC--GSPNYAAPEVISGKL- 182
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
+ DV+ G++L M R
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRR 204
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 72 KLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE---EFINEVSTIGRIHHVNVVQLLG 127
KLG G +G V + + + A+K++ + S + + EV+ + + H N+++L
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTA-----RGIEYLHN 182
F + LV E G L + + K +EV G+ YLH
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRM---------KFNEVDAAVIIKQVLSGVTYLHK 154
Query: 183 GCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 239
I+H D+KP N+LL + + + K+ DFGL+ + + GT YIAPE
Sbjct: 155 HN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGTAYYIAPE 208
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEMAGG 267
++ + + K DV+ G++L + G
Sbjct: 209 VLRKKYDE---KCDVWSIGVILFILLAG 233
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 30/209 (14%)
Query: 73 LGQGGFGSVYKGQ----LQTGGLIAVKMLE------NSKFSAEEFINEVSTIGRIHHVNV 122
LG+GG+G V++ + TG + A+K+L+ N+K +A E + + + H +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT-KAERNILEEVKHPFI 83
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRG----QSLCWEKLHEVALGTARGIE 178
V L+ G K L+ EY+ G L + E G + C+ L E+++ +
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACF-YLAEISMA----LG 135
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+LH I++ D+KP NI+L+H K++DFGL K +D GTI Y+AP
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAP 190
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ R+ + D + G ++ +M G
Sbjct: 191 EILMRSGHNRAV--DWWSLGALMYDMLTG 217
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 99/241 (41%), Gaps = 50/241 (20%)
Query: 68 HFTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKF------SAEEFINEVSTIGRIHHV 120
H +GQG +G V + QT + A+K++ +K E EV + ++HH
Sbjct: 29 HLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHP 88
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSL-DR-HVFPKESRGQSL----------CWEKLHE 168
N+ +L + LV E G L D+ +VF +S G+ C E E
Sbjct: 89 NIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 169 VALGTARG------------------------IEYLHNGCDVCILHFDIKPHNILLDHN- 203
G+ G + YLHN I H DIKP N L N
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNK 205
Query: 204 -FIPKVSDFGLAKFHPKEN--DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 260
F K+ DFGL+K K N ++ ++ GT ++APE+++ + K D + G++
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 261 L 261
L
Sbjct: 266 L 266
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 105/243 (43%), Gaps = 23/243 (9%)
Query: 31 SRRTTLKTIDNIEKFLRNQQSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQ-LQTG 89
SR + KT DN L + P Y Y + + H +LG+G FG V++ + QTG
Sbjct: 43 SREPSPKTEDNEGVLLTEKLK--PVDYEYREEVHWATHQL-RLGRGSFGEVHRMEDKQTG 99
Query: 90 GLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDR 149
AVK + F AEE + + +V L G EG + E + GSL +
Sbjct: 100 FQCAVKKVRLEVFRAEELM----ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ 155
Query: 150 HVFPKESRGQSLCWEKLHEVALGTA-RGIEYLHNGCDVCILHFDIKPHNILLDHNFI-PK 207
V + Q E LG A G+EYLH+ ILH D+K N+LL +
Sbjct: 156 LV-----KEQGCLPEDRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAA 207
Query: 208 VSDFGLAK-FHPK--ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ DFG A P D ++ GT ++APE++ + K DV+ ++L M
Sbjct: 208 LCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGR--SCDAKVDVWSSCCMMLHM 265
Query: 265 AGG 267
G
Sbjct: 266 LNG 268
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 36/214 (16%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVK--MLENSKFSAEEF----INEVSTIGRIHHVNVVQ 124
K+GQG FG V+K + +TG +A+K ++EN K E F + E+ + + H NVV
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVN 81
Query: 125 LLGFCSEGSKRA--------LVYEYMPN--GSLDRHVFPKESRGQSLCWEKLHEVALGTA 174
L+ C + LV+++ + L +V K ++ V
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK------FTLSEIKRVMQMLL 135
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATR-GT 232
G+ Y+H ILH D+K N+L+ + + K++DFGLA+ F +N + R T
Sbjct: 136 NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 233 IGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 264
+ Y PEL+ R++G D++G G ++ EM
Sbjct: 193 LWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 25/208 (12%)
Query: 74 GQGGFGSVYKGQLQTGGL-IAVK-MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF--- 128
GQG FG+V G+ ++ G+ +A+K ++++ +F E + + + +HH N+VQL +
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSYFYT 90
Query: 129 CSEGSKRAL----VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLH-NG 183
E +R + V EY+P+ +L R R + + R I LH
Sbjct: 91 LGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS 149
Query: 184 CDVCILHFDIKPHNILLDH-NFIPKVSDFGLA-KFHPKENDFVSISATRGTIGYIAPELI 241
+VC H DIKPHN+L++ + K+ DFG A K P E + I + Y APELI
Sbjct: 150 VNVC--HRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY----YRAPELI 203
Query: 242 SRNFGT--VSCKSDVYGFGMVLLEMAGG 267
FG + D++ G + EM G
Sbjct: 204 ---FGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 93 AVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVF 152
AVK+++ SK E I + G+ H N++ L +G LV E M G L +
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL 113
Query: 153 PKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNIL-LDHNFIP---KV 208
++ + LH + + +EYLH+ ++H D+KP NIL +D + P ++
Sbjct: 114 RQKFFSEREASFVLHTIG----KTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRI 166
Query: 209 SDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
DFG AK EN + T ++APE++ R C D++ G++L M G
Sbjct: 167 CDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGC--DIWSLGILLYTMLAG 221
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 73 LGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 127
LG+G FG V + TG A+K+L+ A++ + T R+ H + L
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ V EY G L H+ SR + ++ ++YLH+ +V
Sbjct: 76 SFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHSEKNV- 130
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 246
++ D+K N++LD + K++DFGL K K D ++ GT Y+APE++ N +G
Sbjct: 131 -VYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEYLAPEVLEDNDYG 187
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D +G G+V+ EM GR
Sbjct: 188 RA---VDWWGLGVVMYEMMCGR 206
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 93 AVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVF 152
AVK+++ SK E I + G+ H N++ L +G LV E M G L +
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL 113
Query: 153 PKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNIL-LDHNFIP---KV 208
++ + LH + + +EYLH+ ++H D+KP NIL +D + P ++
Sbjct: 114 RQKFFSEREASFVLHTIG----KTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRI 166
Query: 209 SDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
DFG AK EN + T ++APE++ R C D++ G++L M G
Sbjct: 167 CDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGC--DIWSLGILLYTMLAG 221
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 73 LGQGGFGSV-YKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 127
LG+G FG V + TG A+K+L+ A++ + T R+ H + L
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 76
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ V EY G L H+ SR + ++ ++YLH+ +V
Sbjct: 77 SFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHSEKNV- 131
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 246
++ D+K N++LD + K++DFGL K K D ++ GT Y+APE++ N +G
Sbjct: 132 -VYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEYLAPEVLEDNDYG 188
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D +G G+V+ EM GR
Sbjct: 189 RA---VDWWGLGVVMYEMMCGR 207
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 36/214 (16%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVK--MLENSKFSAEEF----INEVSTIGRIHHVNVVQ 124
K+GQG FG V+K + +TG +A+K ++EN K E F + E+ + + H NVV
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVN 80
Query: 125 LLGFCSEGSKRA--------LVYEYMPN--GSLDRHVFPKESRGQSLCWEKLHEVALGTA 174
L+ C + LV+++ + L +V K + + + V
Sbjct: 81 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE------IKRVMQMLL 134
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATR-GT 232
G+ Y+H ILH D+K N+L+ + + K++DFGLA+ F +N + R T
Sbjct: 135 NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 191
Query: 233 IGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 264
+ Y PEL+ R++G D++G G ++ EM
Sbjct: 192 LWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 222
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 36/214 (16%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVK--MLENSKFSAEEF----INEVSTIGRIHHVNVVQ 124
K+GQG FG V+K + +TG +A+K ++EN K E F + E+ + + H NVV
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVN 81
Query: 125 LLGFCSEGSKRA--------LVYEYMPN--GSLDRHVFPKESRGQSLCWEKLHEVALGTA 174
L+ C + LV+++ + L +V K + + + V
Sbjct: 82 LIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE------IKRVMQMLL 135
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATR-GT 232
G+ Y+H ILH D+K N+L+ + + K++DFGLA+ F +N + R T
Sbjct: 136 NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 233 IGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 264
+ Y PEL+ R++G D++G G ++ EM
Sbjct: 193 LWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 93 AVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVF 152
AVK+++ SK E I + G+ H N++ L +G +V E M G L
Sbjct: 51 AVKIIDKSKRDPTEEIEILLRYGQ--HPNIITLKDVYDDGKYVYVVTELMKGGEL----L 104
Query: 153 PKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNIL-LDHNFIP---KV 208
K R + + V + +EYLH ++H D+KP NIL +D + P ++
Sbjct: 105 DKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRI 161
Query: 209 SDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
DFG AK EN + T ++APE++ R +C D++ G++L M G
Sbjct: 162 CDFGFAKQLRAENGLLMTPCY--TANFVAPEVLERQGYDAAC--DIWSLGVLLYTMLTG 216
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK ++ GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLA-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G F V + + TG +AVK+++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
LV EY G + ++ + K ++ ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELIS-RN 244
+H D+K N+LLD + K++DFG + N+F + G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 245 FGTVSCKSDVYGFGMVLLEMAGG 267
+ + DV+ G++L + G
Sbjct: 189 YD--GPEVDVWSLGVILYTLVSG 209
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 36/214 (16%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVK--MLENSKFSAEEF----INEVSTIGRIHHVNVVQ 124
K+GQG FG V+K + +TG +A+K ++EN K E F + E+ + + H NVV
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVN 81
Query: 125 LLGFCSEGSKRA--------LVYEYMPN--GSLDRHVFPKESRGQSLCWEKLHEVALGTA 174
L+ C + LV+++ + L +V K + + + V
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE------IKRVMQMLL 135
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATR-GT 232
G+ Y+H ILH D+K N+L+ + + K++DFGLA+ F +N + R T
Sbjct: 136 NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 233 IGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 264
+ Y PEL+ R++G D++G G ++ EM
Sbjct: 193 LWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 33/209 (15%)
Query: 73 LGQGGFGSVY--KGQLQTGGLIAVKMLEN----SKFSAEEFINEVSTIGRIHHVNVVQLL 126
LG+G FG V K ++ TG AVK++ K E + EV + ++ H N+ +L
Sbjct: 34 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
F + LV E G L + ++ + + +V GI Y H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL----SGITYXHKNK-- 146
Query: 187 CILHFDIKPHNILL-----DHNFIPKVSDFGLA---KFHPKENDFVSISATRGTIGYIAP 238
I+H D+KP N+LL D N ++ DFGL+ + K D + GT YIAP
Sbjct: 147 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASKKXKDKI------GTAYYIAP 197
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
E++ GT K DV+ G++L + G
Sbjct: 198 EVL---HGTYDEKCDVWSTGVILYILLSG 223
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 32/226 (14%)
Query: 73 LGQGGFGSVY-----KGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGR--IHHVNVVQL 125
LG G +G V+ G TG L A+K+L+ + + E + R + H+
Sbjct: 62 LGTGAYGKVFLVRKISGH-DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 126 L-----GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
L F +E +K L+ +Y+ G L H+ +E + + E+ L +E+L
Sbjct: 121 LVTLHYAFQTE-TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA----LEHL 175
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR-----GTIGY 235
H + I++ DIK NILLD N ++DFGL+K +FV+ R GTI Y
Sbjct: 176 HK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK------EFVADETERAYDFCGTIEY 226
Query: 236 IAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKA 281
+AP+++ D + G+++ E+ G ++ ++S+A
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA 272
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G F V + + TG +AVK+++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
LV EY G + ++ + K ++ ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELIS-RN 244
+H D+K N+LLD + K++DFG + N+F + G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 245 FGTVSCKSDVYGFGMVLLEMAGG 267
+ + DV+ G++L + G
Sbjct: 189 YD--GPEVDVWSLGVILYTLVSG 209
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 59 YPQIIAMTNHFTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFS------AEEFIN-- 109
YP+ + + LG G G V + +T +A+K++ KF+ A+ +N
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 110 -EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHE 168
E+ + +++H ++++ F + +V E M G L V + ++ C ++
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 169 VALGTARGIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFV 224
+ L ++YLH NG I+H D+KP N+LL + + + K++DFG +K + +
Sbjct: 123 MLLA----VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 174
Query: 225 SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 262
++ GT Y+APE L+S + D + G++L
Sbjct: 175 TLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 59 YPQIIAMTNHFTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFS------AEEFIN-- 109
YP+ + + LG G G V + +T +A+K++ KF+ A+ +N
Sbjct: 3 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 62
Query: 110 -EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHE 168
E+ + +++H ++++ F + +V E M G L V + ++ C ++
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 169 VALGTARGIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFV 224
+ L ++YLH NG I+H D+KP N+LL + + + K++DFG +K + +
Sbjct: 122 MLLA----VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 173
Query: 225 SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 262
++ GT Y+APE L+S + D + G++L
Sbjct: 174 TLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 209
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 59 YPQIIAMTNHFTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFS------AEEFIN-- 109
YP+ + + LG G G V + +T +A+K++ KF+ A+ +N
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 110 -EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHE 168
E+ + +++H ++++ F + +V E M G L V + ++ C ++
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 169 VALGTARGIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFV 224
+ L ++YLH NG I+H D+KP N+LL + + + K++DFG +K + +
Sbjct: 123 MLLA----VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 174
Query: 225 SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 262
++ GT Y+APE L+S + D + G++L
Sbjct: 175 TLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 59 YPQIIAMTNHFTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFS------AEEFIN-- 109
YP+ + + LG G G V + +T +A+K++ KF+ A+ +N
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 110 -EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHE 168
E+ + +++H ++++ F + +V E M G L V + ++ C ++
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 169 VALGTARGIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFV 224
+ L ++YLH NG I+H D+KP N+LL + + + K++DFG +K + +
Sbjct: 123 MLLA----VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 174
Query: 225 SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 262
++ GT Y+APE L+S + D + G++L
Sbjct: 175 TLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 31/207 (14%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G F V + + TG +AVK+++ ++ S ++ EV + ++H N+V+L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 129 CSEGSKRALVYEYMPNGS----LDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
LV EY G L H + KE ++ K ++ ++Y H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARA----KFRQIV----SAVQYCHQKF 126
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELI 241
I+H D+K N+LLD + K++DFG + N+F + G+ Y APEL
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDTFCGSPPYAAPELF 177
Query: 242 S-RNFGTVSCKSDVYGFGMVLLEMAGG 267
+ + + DV+ G++L + G
Sbjct: 178 QGKKYD--GPEVDVWSLGVILYTLVSG 202
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 86 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 142 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATR---WYRAPE-IMLN 192
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 95 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 151 ---IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 201
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 71 HKLGQGGFGSVYKGQ-LQTGGLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLL 126
K+G+G +G+V+K + +T ++A+K + ++ + + E+ + + H N+V+L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
K LV+E+ + L ++ +S L E + +G+ + H+
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSRN-- 121
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRN 244
+LH D+KP N+L++ N K++DFGLA+ P SA T+ Y P+++
Sbjct: 122 -VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR----CYSAEVVTLWYRPPDVL--- 173
Query: 245 FGT--VSCKSDVYGFGMVLLEMAGGRR 269
FG S D++ G + E+A R
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFAEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 45/241 (18%)
Query: 71 HK-LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI-----HHVNVV 123
HK LG+G FG V+ + + T A+K L+ ++ + R+ H +
Sbjct: 23 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLT 82
Query: 124 QLLGFCSEGSKRAL--VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR---GIE 178
+ FC+ +K L V EY+ G L H+ QS L A G++
Sbjct: 83 HM--FCTFQTKENLFFVMEYLNGGDLMYHI-------QSCHKFDLSRATFYAAEIILGLQ 133
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH----PKENDFVSISATRGTIG 234
+LH+ I++ D+K NILLD + K++DFG+ K + K N+F GT
Sbjct: 134 FLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC------GTPD 184
Query: 235 YIAPELISRNFGTVSCKS-DVYGFGMVLLEMAGGR-------RNSNMNATRSSKAYFPSW 286
YIAPE++ G S D + FG++L EM G+ ++ R ++P W
Sbjct: 185 YIAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW 241
Query: 287 V 287
+
Sbjct: 242 L 242
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 32/230 (13%)
Query: 48 NQQSW-MPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKF 102
N+ W +P+RY Q +A +G G +GSV +TG +AVK L S
Sbjct: 24 NKTIWEVPERY---QNLA-------PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 73
Query: 103 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKE----SRG 158
A+ E+ + + H NV+ LL + R+L E + L H+ + +
Sbjct: 74 HAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKC 129
Query: 159 QSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218
Q L + + + RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+
Sbjct: 130 QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-- 184
Query: 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
+++ ATR Y APE I N+ + D++ G ++ E+ GR
Sbjct: 185 TDDEMTGYVATR---WYRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 59 YPQIIAMTNHFTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFS------AEEFIN-- 109
YP+ + + LG G G V + +T +A+K++ KF+ A+ +N
Sbjct: 10 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 69
Query: 110 -EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHE 168
E+ + +++H ++++ F + +V E M G L V + ++ C ++
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 169 VALGTARGIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFV 224
+ L ++YLH NG I+H D+KP N+LL + + + K++DFG +K + +
Sbjct: 129 MLLA----VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 180
Query: 225 SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 262
++ GT Y+APE L+S + D + G++L
Sbjct: 181 TLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 38/243 (15%)
Query: 73 LGQGGFGSVYKGQLQTGG-LIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
LGQG FG V K + A+K + +++ ++EV + ++H VV+ E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 132 G----------SKRALVY---EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
K++ ++ EY N +L + + Q + +L L +
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL---EALS 130
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV------------SI 226
Y+H+ I+H D+KP NI +D + K+ DFGLAK + D + ++
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-----AGGRRNSNMNATRSSKA 281
++ GT Y+A E++ G + K D+Y G++ EM G R + + RS
Sbjct: 188 TSAIGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSI 246
Query: 282 YFP 284
FP
Sbjct: 247 EFP 249
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRT-----WXLXGTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G F V + + TG +AVK+++ ++ S ++ EV ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
LV EY G + ++ + K ++ ++Y H I
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELIS-RN 244
+H D+K N+LLD + K++DFG + N+F + A G Y APEL +
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 245 FGTVSCKSDVYGFGMVLLEMAGG 267
+ + DV+ G++L + G
Sbjct: 189 YD--GPEVDVWSLGVILYTLVSG 209
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 23/198 (11%)
Query: 55 KRYSYPQIIAMT-----NHFT--HKLGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEE 106
K+Y YPQ + + +H+ +LG G FG V++ + TG A K + S +E
Sbjct: 35 KQY-YPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE 93
Query: 107 FI-NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEK 165
+ E+ T+ + H +V L + ++ ++YE+M G L V + ++ + ++
Sbjct: 94 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK---MSEDE 150
Query: 166 LHEVALGTARGIEYLHNGCDVCILHFDIKPHNILL--DHNFIPKVSDFGL-AKFHPKEND 222
E +G+ ++H +H D+KP NI+ + K+ DFGL A PK+
Sbjct: 151 AVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-- 205
Query: 223 FVSISATRGTIGYIAPEL 240
S+ T GT + APE+
Sbjct: 206 --SVKVTTGTAEFAAPEV 221
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 86 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 142 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 192
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 23/198 (11%)
Query: 55 KRYSYPQIIAMT-----NHFT--HKLGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEE 106
K+Y YPQ + + +H+ +LG G FG V++ + TG A K + S +E
Sbjct: 141 KQY-YPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE 199
Query: 107 FI-NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEK 165
+ E+ T+ + H +V L + ++ ++YE+M G L V + ++ + ++
Sbjct: 200 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK---MSEDE 256
Query: 166 LHEVALGTARGIEYLHNGCDVCILHFDIKPHNILL--DHNFIPKVSDFGL-AKFHPKEND 222
E +G+ ++H +H D+KP NI+ + K+ DFGL A PK+
Sbjct: 257 AVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-- 311
Query: 223 FVSISATRGTIGYIAPEL 240
S+ T GT + APE+
Sbjct: 312 --SVKVTTGTAEFAAPEV 327
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G F V + + TG +A+K+++ ++ S ++ EV + ++H N+V+L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
L+ EY G + ++ + K ++ ++Y H I
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCHQKR---I 135
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELIS-RN 244
+H D+K N+LLD + K++DFG + N+F + A G Y APEL +
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFS------NEFTVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 245 FGTVSCKSDVYGFGMVLLEMAGG 267
+ + DV+ G++L + G
Sbjct: 190 YD--GPEVDVWSLGVILYTLVSG 210
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 95 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 151 ---IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 201
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G F V + + TG +AV++++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
LV EY G + ++ + K ++ ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAK---FHPKENDFVSISATRGTIGYIAPELIS-RN 244
+H D+K N+LLD + K++DFG + F K ++F G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC------GSPPYAAPELFQGKK 188
Query: 245 FGTVSCKSDVYGFGMVLLEMAGG 267
+ + DV+ G++L + G
Sbjct: 189 YD--GPEVDVWSLGVILYTLVSG 209
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 73
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 133
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 96 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 152 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 202
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 34 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 93
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 153
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 154 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 206
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 207 GFAKRVKG-----ATWTLCGTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 255
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 95 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 151 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 201
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 89 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 144
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 145 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 195
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 101 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 156
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 157 ---IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 207
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 97 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 153 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 203
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGXVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G F V + + TG +AV++++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
LV EY G + ++ + K ++ ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELIS-RN 244
+H D+K N+LLD + K++DFG + N+F + G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 245 FGTVSCKSDVYGFGMVLLEMAGG 267
+ + DV+ G++L + G
Sbjct: 189 YD--GPEVDVWSLGVILYTLVSG 209
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 109 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 164
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 165 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 215
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 95 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 151 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 201
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 110 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 166 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 216
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 45/249 (18%)
Query: 63 IAMTNHFTHK-LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI--- 117
+ + + HK LG+G FG V+ + + T A+K L+ ++ + R+
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 118 --HHVNVVQLLGFCSEGSKRAL--VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGT 173
H + + FC+ +K L V EY+ G L H+ QS L
Sbjct: 74 AWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHI-------QSCHKFDLSRATFYA 124
Query: 174 AR---GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH----PKENDFVSI 226
A G+++LH+ I++ D+K NILLD + K++DFG+ K + K N F
Sbjct: 125 AEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC-- 179
Query: 227 SATRGTIGYIAPELISRNFGTVSCKS-DVYGFGMVLLEMAGGR-------RNSNMNATRS 278
GT YIAPE++ G S D + FG++L EM G+ ++ R
Sbjct: 180 ----GTPDYIAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 232
Query: 279 SKAYFPSWV 287
++P W+
Sbjct: 233 DNPFYPRWL 241
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G F V + + TG +AVK+++ ++ S ++ EV + ++H N+V+L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
LV EY G + ++ + K ++ ++Y H I
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKY---I 135
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELIS-RN 244
+H D+K N+LLD + K++DFG + N+F + G+ Y APEL +
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFS------NEFTVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 245 FGTVSCKSDVYGFGMVLLEMAGG 267
+ + DV+ G++L + G
Sbjct: 190 YD--GPEVDVWSLGVILYTLVSG 210
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 92 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 148 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 198
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 87 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 142
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 143 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 193
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 29/208 (13%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +G+V +TG +A+K L S+ A+ E+ + + H NV+ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 129 ------CSEGSKRALVYEYMPN--GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
+ + LV +M G L +H E R Q L ++ L +G+ Y+
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQML--------KGLRYI 144
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 240
H I+H D+KP N+ ++ + K+ DFGLA+ +++ TR Y APE+
Sbjct: 145 HAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXGXVVTR---WYRAPEV 196
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
I N+ + D++ G ++ EM G+
Sbjct: 197 IL-NWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 87 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 142
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 143 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 193
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 8 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 67
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 68 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 127
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 128 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 180
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 181 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 229
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 86 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 142 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 192
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 72 KLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEE--FINEVSTIGR-IHHVNVVQLLG 127
+LG+G +G V K + + +G + AVK + + S E+ + ++ R + V G
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 128 -FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
EG + + + SLD+ +GQ++ + L ++A+ + +E+LH+ +
Sbjct: 101 ALFREGD--VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--L 156
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
++H D+KP N+L++ K DFG++ + D V+ G Y APE I+
Sbjct: 157 SVIHRDVKPSNVLINALGQVKXCDFGISGYL---VDDVAKDIDAGCKPYXAPERINPELN 213
Query: 247 T--VSCKSDVYGFGMVLLEMA 265
S KSD++ G+ +E+A
Sbjct: 214 QKGYSVKSDIWSLGITXIELA 234
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 88 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 143
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 144 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 194
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 113 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 168
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 169 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 219
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 32/230 (13%)
Query: 48 NQQSW-MPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKF 102
N+ W +P+RY Q ++ +G G +GSV +++G IAVK L S
Sbjct: 43 NKTIWEVPERY---QTLS-------PVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSII 92
Query: 103 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKE----SRG 158
A+ E+ + + H NV+ LL + + E + L H+ + +
Sbjct: 93 HAKRTYRELRLLKHMKHENVIGLLDVFTPATS----LEEFNDVYLVTHLMGADLNNIVKC 148
Query: 159 QSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218
Q L + + + RG++Y+H+ I+H D+KP N+ ++ + K+ DFGLA+
Sbjct: 149 QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-- 203
Query: 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
+++ ATR Y APE++ N+ + D++ G ++ E+ GR
Sbjct: 204 TDDEMTGYVATR---WYRAPEIM-LNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 92 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 148 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 198
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 34 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 93
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 153
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 154 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 206
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 207 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 255
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 101 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 156
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 157 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 207
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 92 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 148 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 198
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 102 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 158 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 208
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 102 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 158 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 208
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 96 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 152 ---IIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 202
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 102 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 158 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 208
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 110 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 166 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGXVATR---WYRAPE-IMLN 216
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 96 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 152 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 202
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 92 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 148 ---IIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 198
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 59 YPQIIAMTNHFTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFS------AEEFIN-- 109
YP+ + + LG G G V + +T +A++++ KF+ A+ +N
Sbjct: 143 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 202
Query: 110 -EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHE 168
E+ + +++H ++++ F + +V E M G L V + ++ C ++
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 169 VALGTARGIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFV 224
+ L ++YLH NG I+H D+KP N+LL + + + K++DFG +K + +
Sbjct: 262 MLLA----VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 313
Query: 225 SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEMAGG 267
++ GT Y+APE L+S + D + G++L G
Sbjct: 314 TLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 96 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 152 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 202
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 59 YPQIIAMTNHFTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFS------AEEFIN-- 109
YP+ + + LG G G V + +T +A++++ KF+ A+ +N
Sbjct: 129 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 188
Query: 110 -EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHE 168
E+ + +++H ++++ F + +V E M G L V + ++ C ++
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 169 VALGTARGIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFV 224
+ L ++YLH NG I+H D+KP N+LL + + + K++DFG +K + +
Sbjct: 248 MLLA----VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 299
Query: 225 SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEMAGG 267
++ GT Y+APE L+S + D + G++L G
Sbjct: 300 TLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 102/244 (41%), Gaps = 25/244 (10%)
Query: 35 TLKTIDNIEKFLRNQQSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSV----YKGQLQTGG 90
L+ NI+ FL N+ + K+ Q+ A +G+G FG V +K +
Sbjct: 46 ALRKNKNIDNFL-NRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYA 104
Query: 91 LIAVKMLENSKFSAEEFINEVSTIGRIHHVN-VVQLLGFCSEGSKRALVYEYMPNGSL-- 147
+ + E K S F E I + VVQL + +V EYMP G L
Sbjct: 105 MKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN 164
Query: 148 --DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFI 205
+ P++ W K + + A ++ +H+ + ++H D+KP N+LLD +
Sbjct: 165 LMSNYDVPEK-------WAKFYTAEVVLA--LDAIHS---MGLIHRDVKPDNMLLDKHGH 212
Query: 206 PKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT--VSCKSDVYGFGMVLLE 263
K++DFG E V GT YI+PE++ G + D + G+ L E
Sbjct: 213 LKLADFGTC-MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFE 271
Query: 264 MAGG 267
M G
Sbjct: 272 MLVG 275
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 26/208 (12%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+GGFG V+ Q++ TG L A K L + + + E + ++H +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ LV M G + H++ + + G+E+LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR-------GTIGYIAPEL 240
I++ D+KP N+LLD + ++SD GLA V + A + GT G++APEL
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLA---------VELKAGQTKTKGYAGTPGFMAPEL 360
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
+ S D + G+ L EM R
Sbjct: 361 LLGEEYDFSV--DYFALGVTLYEMIAAR 386
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 41 NIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVKM 96
++++FL + K++ P Q A + F LG G FG V ++G A+K+
Sbjct: 1 SVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI 60
Query: 97 LENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVF 152
L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 61 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL- 119
Query: 153 PKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFG 212
R A EYLH+ + +++ D+KP N+L+D +V+DFG
Sbjct: 120 ---RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFG 173
Query: 213 LAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 174 FAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 109 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 164
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 165 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 215
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIH-HVNVVQLLGFCS 130
LG+G F K ++ AVK++ SK E++ + H N+V+L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII--SKRMEANTQKEITALKLCEGHPNIVKLHEVFH 76
Query: 131 EGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILH 190
+ LV E + G L F + + + + + + ++H DV ++H
Sbjct: 77 DQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMH---DVGVVH 129
Query: 191 FDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
D+KP N+L + N K+ DFG A+ P +N + T+ Y APEL+++N
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PLKTPCFTLHYAAPELLNQNGYD 187
Query: 248 VSCKSDVYGFGMVLLEMAGGR 268
SC D++ G++L M G+
Sbjct: 188 ESC--DLWSLGVILYTMLSGQ 206
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 26/208 (12%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+GGFG V+ Q++ TG L A K L + + + E + ++H +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ LV M G + H++ + + G+E+LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR-------GTIGYIAPEL 240
I++ D+KP N+LLD + ++SD GLA V + A + GT G++APEL
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLA---------VELKAGQTKTKGYAGTPGFMAPEL 360
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
+ S D + G+ L EM R
Sbjct: 361 LLGEEYDFSV--DYFALGVTLYEMIAAR 386
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 110 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 166 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 216
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 26/208 (12%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+GGFG V+ Q++ TG L A K L + + + E + ++H +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ LV M G + H++ + + G+E+LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR-------GTIGYIAPEL 240
I++ D+KP N+LLD + ++SD GLA V + A + GT G++APEL
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLA---------VELKAGQTKTKGYAGTPGFMAPEL 360
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
+ S D + G+ L EM R
Sbjct: 361 LLGEEYDFSV--DYFALGVTLYEMIAAR 386
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 113 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 168
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 169 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGYVATR---WYRAPE-IMLN 219
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 26/208 (12%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 127
LG+GGFG V+ Q++ TG L A K L + + + E + ++H +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ LV M G + H++ + + G+E+LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR-------GTIGYIAPEL 240
I++ D+KP N+LLD + ++SD GLA V + A + GT G++APEL
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLA---------VELKAGQTKTKGYAGTPGFMAPEL 360
Query: 241 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
+ S D + G+ L EM R
Sbjct: 361 LLGEEYDFSV--DYFALGVTLYEMIAAR 386
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 97 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ E ++ T Y APE I N
Sbjct: 153 ---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPE-IMLN 203
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 97 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ E ++ T Y APE I N
Sbjct: 153 ---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPE-IMLN 203
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 205 YTK-SIDIWSVGCILAEMLSNR 225
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+++D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE +IS+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIIISKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 205 YTKS-IDIWSVGCILAEMLSNR 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 97 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ E ++ T Y APE I N
Sbjct: 153 ---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPE-IMLN 203
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKF------SAEEFINEVSTIGRIHHVNVVQL 125
+G+G F V + +TG AVK+++ +KF S E+ E S + H ++V+L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
L S +V+E+M L + + G + Y H D
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 148
Query: 186 VCILHFDIKPHNILL--DHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
I+H D+KPH +LL N P K+ FG+A E+ V+ GT ++APE++
Sbjct: 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVA-GGRVGTPHFMAPEVVK 206
Query: 243 RN-FGTVSCKSDVYGFGMVLLEMAGG 267
R +G DV+G G++L + G
Sbjct: 207 REPYGK---PVDVWGCGVILFILLSG 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 205 YTKS-IDIWSVGCILAEMLSNR 225
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKF------SAEEFINEVSTIGRIHHVNVVQL 125
+G+G F V + +TG AVK+++ +KF S E+ E S + H ++V+L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
L S +V+E+M L + + G + Y H D
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 150
Query: 186 VCILHFDIKPHNILL--DHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
I+H D+KPH +LL N P K+ FG+A E+ V+ GT ++APE++
Sbjct: 151 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVA-GGRVGTPHFMAPEVVK 208
Query: 243 RN-FGTVSCKSDVYGFGMVLLEMAGG 267
R +G DV+G G++L + G
Sbjct: 209 REPYGK---PVDVWGCGVILFILLSG 231
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 104/243 (42%), Gaps = 23/243 (9%)
Query: 31 SRRTTLKTIDNIEKFLRNQQSWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQ-LQTG 89
SR + KT DN L + P Y Y + + H +LG+G FG V++ + QTG
Sbjct: 62 SREPSPKTEDNEGVLL--TEKLKPVDYEYREEVHWATHQL-RLGRGSFGEVHRMEDKQTG 118
Query: 90 GLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDR 149
AVK + F AEE + + +V L G EG + E + GSL +
Sbjct: 119 FQCAVKKVRLEVFRAEELM----ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ 174
Query: 150 HVFPKESRGQSLCWEKLHEVALGTA-RGIEYLHNGCDVCILHFDIKPHNILLDHNFI-PK 207
V + Q E LG A G+EYLH+ ILH D+K N+LL +
Sbjct: 175 LV-----KEQGCLPEDRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAA 226
Query: 208 VSDFGLAK-FHPK--ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
+ DFG A P ++ GT ++APE++ + K DV+ ++L M
Sbjct: 227 LCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGR--SCDAKVDVWSSCCMMLHM 284
Query: 265 AGG 267
G
Sbjct: 285 LNG 287
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+APE+I S+ + D + G+++ +MA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYQMAAG 234
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 205 YTK-SIDIWSVGCILAEMLSNR 225
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 42/213 (19%)
Query: 72 KLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEE------FINEVSTIGRIHHVNVVQ 124
KLG+G +G VYK T +A+K + + EE I EVS + + H N+++
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRI---RLEHEEEGVPGTAIREVSLLKELQHRNIIE 97
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY-LHNG 183
L + L++EY N L +++ +K +V++ + Y L NG
Sbjct: 98 LKSVIHHNHRLHLIFEYAEN-DLKKYM------------DKNPDVSMRVIKSFLYQLING 144
Query: 184 CDVC----ILHFDIKPHNILL---DHNFIP--KVSDFGLAK-FHPKENDFVSISATRGTI 233
+ C LH D+KP N+LL D + P K+ DFGLA+ F F + T+
Sbjct: 145 VNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF---THEIITL 201
Query: 234 GYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 264
Y PE++ SR++ T D++ + EM
Sbjct: 202 WYRPPEILLGSRHYST---SVDIWSIACIWAEM 231
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 128
+G+G F V + + TG +A+K+++ ++ S ++ EV + ++H N+V+L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
L+ EY G + ++ + K ++ ++Y H I
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCHQKR---I 132
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELIS-RN 244
+H D+K N+LLD + K++DFG + N+F + G+ Y APEL +
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFS------NEFTVGGKLDTFCGSPPYAAPELFQGKK 186
Query: 245 FGTVSCKSDVYGFGMVLLEMAGG 267
+ + DV+ G++L + G
Sbjct: 187 YD--GPEVDVWSLGVILYTLVSG 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ D+GLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDYGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 146
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 207 YTK-SIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 152
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 212
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 213 YTK-SIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 205 YTK-SIDIWSVGCILAEMLSNR 225
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGL + +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDSELKILDFGLCRH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 209 YTK-SIDIWSVGCILAEMLSNR 229
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 73 LGQGGFGSVYKGQ-LQTGGLIAVK-MLENSKFSAEEFINEVSTIGRIH-HVNVVQLLGFC 129
L +GGF VY+ Q + +G A+K +L N + I EV + ++ H N+VQ FC
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ---FC 92
Query: 130 SE----------GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
S G L+ + G L + ESRG C + + ++ T R +++
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSC-DTVLKIFYQTCRAVQH 151
Query: 180 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA---------KFHPKENDFVSISATR 230
+H I+H D+K N+LL + K+ DFG A + + V TR
Sbjct: 152 MHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 231 GTIG-YIAPELIS--RNFGTVSCKSDVYGFGMVL 261
T Y PE+I NF + K D++ G +L
Sbjct: 211 NTTPMYRTPEIIDLYSNF-PIGEKQDIWALGCIL 243
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 164
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 225 YTK-SIDIWSVGCILAEMLSNR 245
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 209 YTKS-IDIWSVGCILAEMLSNR 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 128 FCSEGSKRALVYEYMPNGSLDRHV----FPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183
RA E M + L H+ K + Q L + + RG++Y+H+
Sbjct: 109 II-----RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELIS 242
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++
Sbjct: 164 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGGR 268
+ G D++ G +L EM R
Sbjct: 221 NSKGYTK-SIDIWSVGCILAEMLSNR 245
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ D++ G ++ E+ GR
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 142
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 203 YTK-SIDIWSVGCILAEMLSNR 223
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 44/241 (18%)
Query: 64 AMTNHFT--HKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA---EEFINEVSTIGRI 117
+MT+ + +LG+G F V + ++ TG A K++ K SA ++ E +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 118 HHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQ---SLCWEKLHEVALGTA 174
H N+V+L SE LV++ + G L + +E + S C +++ E
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE------ 114
Query: 175 RGIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATR 230
+ + H NG I+H D+KP N+LL K++DFGLA + D +
Sbjct: 115 -SVNHCHLNG----IVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWFGFA 167
Query: 231 GTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYD 289
GT GY++PE++ ++ +G D++ G++L + G Y P W D
Sbjct: 168 GTPGYLSPEVLRKDPYGK---PVDMWACGVILYILLVG--------------YPPFWDED 210
Query: 290 Q 290
Q
Sbjct: 211 Q 211
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 142
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 203 YTK-SIDIWSVGCILAEMLSNR 223
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 73 LGQGGFGSV---YKGQLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G +GSV Y +L+ +AVK L S A E+ + + H NV+ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ + E +L + Q+L E + + RG++Y+H+
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG-- 151
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
I+H D+KP N+ ++ + ++ DFGLA+ + + ATR Y APE++ N+
Sbjct: 152 -IIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATR---WYRAPEIM-LNWM 204
Query: 247 TVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVY-DQLNK 293
+ D++ G ++ E+ G KA FP Y DQL +
Sbjct: 205 HYNQTVDIWSVGCIMAELLQG------------KALFPGSDYIDQLKR 240
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 149
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 209
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 210 YTK-SIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 94
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 150
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 210
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 211 YTK-SIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 85
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 141
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 201
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 202 YTK-SIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 209 YTK-SIDIWSVGCILAEMLSNR 229
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE-NSKFSAEEFINEVSTIGRIH-HVNVVQLLGFC 129
LG+G + V LQ G AVK++E + S EV T+ + + N+++L+ F
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
+ ++ LV+E + GS+ H+ + + + V A +++LH I
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHI----QKQKHFNEREASRVVRDVAAALDFLHTK---GIA 133
Query: 190 HFDIKPHNILLD--HNFIP-KVSDFGLAKFHPKENDFVSISATR-----GTIGYIAPELI 241
H D+KP NIL + P K+ DF L N I+ G+ Y+APE++
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 242 -----SRNFGTVSCKSDVYGFGMVLLEMAGG 267
F C D++ G+VL M G
Sbjct: 194 EVFTDQATFYDKRC--DLWSLGVVLYIMLSG 222
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 175 RGIEYLHNGCDVC-------ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSI 226
R IE + + C I+H D+KP NIL+ KV DFG+A+ N
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
+A GT Y++PE + +V +SDVY G VL E+ G
Sbjct: 177 AAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKCQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 209 YTK-SIDIWSVGCILAEMLSNR 229
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 44/241 (18%)
Query: 64 AMTNHFT--HKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA---EEFINEVSTIGRI 117
+MT+ + +LG+G F V + ++ TG A K++ K SA ++ E +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 118 HHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQ---SLCWEKLHEVALGTA 174
H N+V+L SE LV++ + G L + +E + S C +++ E
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE------ 114
Query: 175 RGIEYLH-NGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATR 230
+ + H NG I+H D+KP N+LL K++DFGLA + D +
Sbjct: 115 -SVNHCHLNG----IVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWFGFA 167
Query: 231 GTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYD 289
GT GY++PE++ ++ +G D++ G++L + G Y P W D
Sbjct: 168 GTPGYLSPEVLRKDPYGK---PVDMWACGVILYILLVG--------------YPPFWDED 210
Query: 290 Q 290
Q
Sbjct: 211 Q 211
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + L + + + RG++Y+H+
Sbjct: 86 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 142 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 192
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 71 HKLGQGGFGSVYKGQ-LQTGGLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLL 126
K+G+G +G+V+K + +T ++A+K + ++ + + E+ + + H N+V+L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
K LV+E+ + L ++ +S L E + +G+ + H+
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSRN-- 121
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRN 244
+LH D+KP N+L++ N K+++FGLA+ P SA T+ Y P+++
Sbjct: 122 -VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR----CYSAEVVTLWYRPPDVL--- 173
Query: 245 FGT--VSCKSDVYGFGMVLLEMAGGRR 269
FG S D++ G + E+A R
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGR 200
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT Y+AP +I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPAIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 175 RGIEYLHNGCDVC-------ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSI 226
R IE + + C I+H D+KP NI++ KV DFG+A+ N
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
+A GT Y++PE + +V +SDVY G VL E+ G
Sbjct: 177 AAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 175 RGIEYLHNGCDVC-------ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSI 226
R IE + + C I+H D+KP NI++ KV DFG+A+ N
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
+A GT Y++PE + +V +SDVY G VL E+ G
Sbjct: 177 AAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D + T Y APE++ + G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 208
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 209 YTK-SIDIWSVGCILAEMLSNR 229
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 175 RGIEYLHNGCDVC-------ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSI 226
R IE + + C I+H D+KP NI++ KV DFG+A+ N
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
+A GT Y++PE + +V +SDVY G VL E+ G
Sbjct: 177 AAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 175 RGIEYLHNGCDVC-------ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSI 226
R IE + + C I+H D+KP NI++ KV DFG+A+ N
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
+A GT Y++PE + +V +SDVY G VL E+ G
Sbjct: 177 AAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + R H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 149
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D + T Y APE++ + G
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 209
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 210 YTK-SIDIWSVGCILAEMLSNR 230
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLGF 128
+G+G +G V + V + + S F + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSA-YDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188
+ + Y+ ++ ++ K + Q L + + RG++Y+H+ +
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 149
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFGT 247
LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 248 VSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 210 TK-SIDIWSVGCILAEMLSNR 229
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 175 RGIEYLHNGCDVC-------ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSI 226
R IE + + C I+H D+KP NI++ KV DFG+A+ N
Sbjct: 134 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
+A GT Y++PE + +V +SDVY G VL E+ G
Sbjct: 194 AAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 232
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 73 LGQGGFGSV---YKGQLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G +GSV Y +L+ +AVK L S A E+ + + H NV+ LL
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ + E +L + Q+L E + + RG++Y+H+
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG-- 143
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
I+H D+KP N+ ++ + ++ DFGLA+ + + ATR Y APE++ N+
Sbjct: 144 -IIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMTGYVATR---WYRAPEIM-LNWM 196
Query: 247 TVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVY-DQLNK 293
+ D++ G ++ E+ G KA FP Y DQL +
Sbjct: 197 HYNQTVDIWSVGCIMAELLQG------------KALFPGSDYIDQLKR 232
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ DF LA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFYLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 73 LGQGGFGSV---YKGQLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLL 126
+G G +GSV Y +L+ +AVK L S A E+ + + H NV+ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ + E +L + Q+L E + + RG++Y+H+
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG-- 151
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
I+H D+KP N+ ++ + ++ DFGLA+ + + ATR Y APE++ N+
Sbjct: 152 -IIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATR---WYRAPEIM-LNWM 204
Query: 247 TVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVY-DQLNK 293
+ D++ G ++ E+ G KA FP Y DQL +
Sbjct: 205 HYNQTVDIWSVGCIMAELLQG------------KALFPGSDYIDQLKR 240
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 53 MPKRYSYPQIIAMTNHFTHK--LGQGGFGSVYKGQLQ-TGGLIAVKMLE--NSKFSAEEF 107
MPKR Y +++ F K LG+G +G V + TG ++A+K +E + A
Sbjct: 1 MPKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 108 INEVSTIGRIHHVNVVQLLGF----CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCW 163
+ E+ + H N++ + E + + + L R + Q L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSD 111
Query: 164 EKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF------- 216
+ + T R ++ LH G +V +H D+KP N+L++ N KV DFGLA+
Sbjct: 112 DHIQYFIYQTLRAVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 217 --HP--KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
P +++ V ATR Y APE++ + S DV+ G +L E+
Sbjct: 169 NSEPTGQQSGMVEFVATR---WYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 68 HFTHKLGQGGFGSVYKGQLQTGGLI-AVKMLENS----KFSAEEFINEVSTIGR-IHHVN 121
HF +G+G FG V + + + AVK+L+ K + ++E + + + + H
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLH 181
+V L K V +Y+ G L H+ R + + A A + YLH
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHL----QRERCFLEPRARFYAAEIASALGYLH 156
Query: 182 NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 241
+ + I++ D+KP NILLD ++DFGL K + + N + S GT Y+APE++
Sbjct: 157 S---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVL 211
Query: 242 SRNFGTVSCKSDVYGFGMVLLEMAGG 267
+ D + G VL EM G
Sbjct: 212 HKQ--PYDRTVDWWCLGAVLYEMLYG 235
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 34/218 (15%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGG--------LIAVKMLENS-KFSAEEFINEVSTIGRIHH 119
F LGQG F ++KG + G + +K+L+ + + +E F S + ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 120 VNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
++V G C G + LV E++ GSLD ++ K ++ W+ EVA A + +
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKL--EVAKQLAAAMHF 128
Query: 180 LHNGCDVCILHFDIKPHNILL---------DHNFIPKVSDFGLA-KFHPKENDFVSISAT 229
L ++H ++ NILL + FI K+SD G++ PK+
Sbjct: 129 LEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPKD-------IL 177
Query: 230 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
+ I ++ PE I N ++ +D + FG L E+ G
Sbjct: 178 QERIPWVPPECIE-NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 33/170 (19%)
Query: 105 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWE 164
E+ E++ + ++ H NVV+L+ + ++ L YM VF ++G +
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHL---YM--------VFELVNQGPVMEVP 129
Query: 165 KLHEVALGTAR--------GIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216
L ++ AR GIEYLH I+H DIKP N+L+ + K++DFG++
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVS-- 184
Query: 217 HPKENDF----VSISATRGTIGYIAPELISRNFGTVSCKS-DVYGFGMVL 261
N+F +S T GT ++APE +S S K+ DV+ G+ L
Sbjct: 185 ----NEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 24/237 (10%)
Query: 40 DNIEKFLRNQQSWMPKRYSYP-QIIAMTNHFTH--KLGQGGFGSV-YKGQLQTGGLIAVK 95
+++++FL + K++ P Q A + F LG G FG V ++G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 96 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHV 151
+L+ K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 152 FPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211
R A EYLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 212 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 267
G AK + GT +APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEALAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 28/196 (14%)
Query: 88 TGGLIAVKMLE--NSKFSAEEFINEVSTIGRIH---------HVNVVQLLGFCSEGSKRA 136
TG AVK++E + S E+ + EV R H +++ L+ S
Sbjct: 118 TGHEFAVKIMEVTAERLSPEQ-LEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMF 176
Query: 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPH 196
LV++ M G L F + +L ++ + + +LH I+H D+KP
Sbjct: 177 LVFDLMRKGEL----FDYLTEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPE 229
Query: 197 NILLDHNFIPKVSDFGLA-KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSC----K 251
NILLD N ++SDFG + P E + GT GY+APE++ + +
Sbjct: 230 NILLDDNMQIRLSDFGFSCHLEPGEK----LRELCGTPGYLAPEILKCSMDETHPGYGKE 285
Query: 252 SDVYGFGMVLLEMAGG 267
D++ G++L + G
Sbjct: 286 VDLWACGVILFTLLAG 301
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ D GLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDAGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 17/179 (9%)
Query: 93 AVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVF 152
AVK+++ SK E I + G+ H N++ L +G +V E G L
Sbjct: 51 AVKIIDKSKRDPTEEIEILLRYGQ--HPNIITLKDVYDDGKYVYVVTELXKGGEL----L 104
Query: 153 PKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNIL-LDHNFIP---KV 208
K R + + V + +EYLH ++H D+KP NIL +D + P ++
Sbjct: 105 DKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRI 161
Query: 209 SDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
DFG AK EN + T ++APE++ R +C D++ G++L G
Sbjct: 162 CDFGFAKQLRAENGLLXTPCY--TANFVAPEVLERQGYDAAC--DIWSLGVLLYTXLTG 216
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 34/218 (15%)
Query: 69 FTHKLGQGGFGSVYKGQLQTGG--------LIAVKMLENS-KFSAEEFINEVSTIGRIHH 119
F LGQG F ++KG + G + +K+L+ + + +E F S + ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 120 VNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY 179
++V G C G + LV E++ GSLD ++ K ++ W+ EVA A + +
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKL--EVAKQLAWAMHF 128
Query: 180 LHNGCDVCILHFDIKPHNILL---------DHNFIPKVSDFGLA-KFHPKENDFVSISAT 229
L ++H ++ NILL + FI K+SD G++ PK+
Sbjct: 129 LEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPKD-------IL 177
Query: 230 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
+ I ++ PE I N ++ +D + FG L E+ G
Sbjct: 178 QERIPWVPPECIE-NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 26/220 (11%)
Query: 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIH-------HV 120
H K+G G FGSV+K + G I ++ SK ++E + + ++ H
Sbjct: 10 HELEKIGSGEFGSVFKCVKRLDGCIYA--IKRSKKPLAGSVDEQNALREVYAHAVLGQHS 67
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
+VV+ +E + EY GSL + +L ++ L RG+ Y+
Sbjct: 68 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 127
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVS-------DFGLAKFHPKENDFVSIS------ 227
H+ + ++H DIKP NI + IP + D+ K K D ++
Sbjct: 128 HS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ 184
Query: 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
G ++A E++ N+ T K+D++ + ++ AG
Sbjct: 185 VEEGDSRFLANEVLQENY-THLPKADIFALALTVVXAAGA 223
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ FGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILGFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ D GLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDRGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 38/243 (15%)
Query: 73 LGQGGFGSVYKGQLQTGG-LIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
LGQG FG V K + A+K + +++ ++EV + ++H VV+ E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 132 G----------SKRALVY---EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
K++ ++ EY N +L + + Q + +L L +
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL---EALS 130
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV------------SI 226
Y+H+ I+H ++KP NI +D + K+ DFGLAK + D + ++
Sbjct: 131 YIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-----AGGRRNSNMNATRSSKA 281
++ GT Y+A E++ G + K D Y G++ E G R + + RS
Sbjct: 188 TSAIGTAXYVATEVLD-GTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRSVSI 246
Query: 282 YFP 284
FP
Sbjct: 247 EFP 249
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI-----HHVNVVQLL 126
+G+G + V +L+ T + A+K+++ + +E I+ V T + +H +V L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
S+ V EY+ G L H+ R + L E + + + YLH +
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEISLALNYLH---ER 140
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNF 245
I++ D+K N+LLD K++D+G+ K + D + S GT YIAPE++ ++
Sbjct: 141 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDY 198
Query: 246 GTVSCKSDVYGFGMVLLEMAGGR 268
G D + G+++ EM GR
Sbjct: 199 G---FSVDWWALGVLMFEMMAGR 218
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 42/240 (17%)
Query: 64 AMTNHFT--HKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA---EEFINEVSTIGRI 117
+MT+ + +G+G F V + +L TG A K++ K SA ++ E +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 118 HHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQ---SLCWEKLHEVALGTA 174
H N+V+L SE LV++ + G L + +E + S C +++ E L
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL--- 117
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNF---IPKVSDFGLAKFHPKENDFVSISATRG 231
+ H + ++H D+KP N+LL K++DFGLA + D + G
Sbjct: 118 ----HCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGDQQAWFGFAG 168
Query: 232 TIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQ 290
T GY++PE++ + +G D++ G++L + G Y P W DQ
Sbjct: 169 TPGYLSPEVLRKEAYGK---PVDIWACGVILYILLVG--------------YPPFWDEDQ 211
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 42/247 (17%)
Query: 59 YPQIIAMTNHFT------HKLGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSA---EEFI 108
Y Q +A FT +LG+G F V + +T A K++ K SA ++
Sbjct: 19 YFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE 78
Query: 109 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHE 168
E + H N+V+L SE LV++ + G L + +E ++ +H+
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQ 138
Query: 169 VALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF---IPKVSDFGLA-KFHPKENDFV 224
+ + ++H I+H D+KP N+LL K++DFGLA + ++ +
Sbjct: 139 I----LESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF 191
Query: 225 SISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF 283
+ GT GY++PE++ ++ +G D++ G++L + G Y
Sbjct: 192 GFA---GTPGYLSPEVLRKDPYGK---PVDIWACGVILYILLVG--------------YP 231
Query: 284 PSWVYDQ 290
P W DQ
Sbjct: 232 PFWDEDQ 238
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI-----HHVNVVQLL 126
+G+G + V +L+ T + A+K+++ + +E I+ V T + +H +V L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
S+ V EY+ G L H+ R + L E + + + YLH +
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEISLALNYLH---ER 125
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNF 245
I++ D+K N+LLD K++D+G+ K + D + S GT YIAPE++ ++
Sbjct: 126 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDY 183
Query: 246 GTVSCKSDVYGFGMVLLEMAGGR 268
G D + G+++ EM GR
Sbjct: 184 G---FSVDWWALGVLMFEMMAGR 203
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 16/201 (7%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 127
LG+GGF Y+ + T + A K++ S E+ E++ + + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
F + +V E SL R +++ + T +G++YLHN
Sbjct: 110 FFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--- 162
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++ +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKTLCGTPNYIAPEVLCKK--G 218
Query: 248 VSCKSDVYGFGMVLLEMAGGR 268
S + D++ G +L + G+
Sbjct: 219 HSFEVDIWSLGCILYTLLVGK 239
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 93 AVKMLENS---KFSAEEF-------INEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYEY 141
AVK+++ + FSAEE + EV + ++ H N++QL + LV++
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 105
Query: 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD 201
M G L F + +L ++ ++ I LH + I+H D+KP NILLD
Sbjct: 106 MKKGEL----FDYLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLD 158
Query: 202 HNFIPKVSDFGLA-KFHPKENDFVSISATRGTIGYIAPELI----SRNFGTVSCKSDVYG 256
+ K++DFG + + P E + + GT Y+APE+I + N + D++
Sbjct: 159 DDMNIKLTDFGFSCQLDPGEK----LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
Query: 257 FGMVLLEMAGG 267
G+++ + G
Sbjct: 215 TGVIMYTLLAG 225
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 128
+G G +GSV +TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CSEGSKRALVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+ R+L E + L H+ + + Q L + + + RG++Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244
I+H D+KP N+ ++ + K+ D GLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDGGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 245 FGTVSCKSDVYGFGMVLLEMAGGR 268
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI-----HHVNVVQLL 126
+G+G + V +L+ T + A+K+++ + +E I+ V T + +H +V L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
S+ V EY+ G L H+ R + L E + + + YLH +
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEISLALNYLH---ER 129
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNF 245
I++ D+K N+LLD K++D+G+ K + D + S GT YIAPE++ ++
Sbjct: 130 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDY 187
Query: 246 GTVSCKSDVYGFGMVLLEMAGGR 268
G D + G+++ EM GR
Sbjct: 188 G---FSVDWWALGVLMFEMMAGR 207
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 16/201 (7%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 127
LG+GGF Y+ + T + A K++ S E+ E++ + + +VV G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
F + +V E SL R +++ + T +G++YLHN
Sbjct: 94 FFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--- 146
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++ +
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPEVLCKK--G 202
Query: 248 VSCKSDVYGFGMVLLEMAGGR 268
S + D++ G +L + G+
Sbjct: 203 HSFEVDIWSLGCILYTLLVGK 223
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 146
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 207 YTK-SIDIWSVGCILAEMLSNR 227
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 16/201 (7%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 127
LG+GGF Y+ + T + A K++ S E+ E++ + + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
F + +V E SL R +++ + T +G++YLHN
Sbjct: 110 FFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--- 162
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++ +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKXLCGTPNYIAPEVLCKK--G 218
Query: 248 VSCKSDVYGFGMVLLEMAGGR 268
S + D++ G +L + G+
Sbjct: 219 HSFEVDIWSLGCILYTLLVGK 239
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 69 FTHKLGQGGFG--SVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLL 126
F +G G FG + + +L T L+AVK +E E E+ + H N+V+
Sbjct: 24 FVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFK 82
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ A++ EY G L + + ++ G+ Y H+ +
Sbjct: 83 EVILTPTHLAIIMEYASGGEL----YERICNAGRFSEDEARFFFQQLLSGVSYCHS---M 135
Query: 187 CILHFDIKPHNILLDHNFIP--KVSDFGLAK---FHPKENDFVSISATRGTIGYIAPELI 241
I H D+K N LLD + P K+ DFG +K H + +T GT YIAPE++
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK------STVGTPAYIAPEVL 189
Query: 242 SRN--FGTVSCKSDVYGFGMVLLEMAGG 267
R G + +DV+ G+ L M G
Sbjct: 190 LRQEYDGKI---ADVWSCGVTLYVMLVG 214
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 93 AVKMLENS---KFSAEEF-------INEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYEY 141
AVK+++ + FSAEE + EV + ++ H N++QL + LV++
Sbjct: 33 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 92
Query: 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD 201
M G L F + +L ++ ++ I LH + I+H D+KP NILLD
Sbjct: 93 MKKGEL----FDYLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLD 145
Query: 202 HNFIPKVSDFGLA-KFHPKENDFVSISATRGTIGYIAPELI----SRNFGTVSCKSDVYG 256
+ K++DFG + + P E + GT Y+APE+I + N + D++
Sbjct: 146 DDMNIKLTDFGFSCQLDPGEK----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 201
Query: 257 FGMVLLEMAGG 267
G+++ + G
Sbjct: 202 TGVIMYTLLAG 212
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 26/220 (11%)
Query: 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIH-------HV 120
H K+G G FGSV+K + G I ++ SK ++E + + ++ H
Sbjct: 12 HELEKIGSGEFGSVFKCVKRLDGCIYA--IKRSKKPLAGSVDEQNALREVYAHAVLGQHS 69
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
+VV+ +E + EY GSL + +L ++ L RG+ Y+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVS-------DFGLAKFHPKENDFVSIS------ 227
H+ + ++H DIKP NI + IP + D+ K K D ++
Sbjct: 130 HS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ 186
Query: 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
G ++A E++ N+ + K+D++ + ++ AG
Sbjct: 187 VEEGDSRFLANEVLQENYTHLP-KADIFALALTVVCAAGA 225
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 16/201 (7%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 127
LG+GGF Y+ + T + A K++ S E+ E++ + + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
F + +V E SL R +++ + T +G++YLHN
Sbjct: 110 FFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--- 162
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++ +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPEVLCKK--G 218
Query: 248 VSCKSDVYGFGMVLLEMAGGR 268
S + D++ G +L + G+
Sbjct: 219 HSFEVDIWSLGCILYTLLVGK 239
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 26/220 (11%)
Query: 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIH-------HV 120
H K+G G FGSV+K + G I ++ SK ++E + + ++ H
Sbjct: 12 HELEKIGSGEFGSVFKCVKRLDGCIYA--IKRSKKPLAGSVDEQNALREVYAHAVLGQHS 69
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
+VV+ +E + EY GSL + +L ++ L RG+ Y+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVS-------DFGLAKFHPKENDFVSIS------ 227
H+ + ++H DIKP NI + IP + D+ K K D ++
Sbjct: 130 HS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ 186
Query: 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
G ++A E++ N+ + K+D++ + ++ AG
Sbjct: 187 VEEGDSRFLANEVLQENYTHLP-KADIFALALTVVCAAGA 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 127
+G+G +G V + +A+K + S F + + + E+ + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ + Y+ ++ ++ K + Q L + + RG++Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 146
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 246
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 247 TVSCKSDVYGFGMVLLEMAGGR 268
D++ G +L EM R
Sbjct: 207 YTK-SIDIWSVGCILAEMLSNR 227
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 34/211 (16%)
Query: 73 LGQGGFGSVYKGQL----QTGGLIAVKMLENSKF------SAEEFINEVSTIGRIHHVNV 122
+G+G FG V QL T + A+K+L SKF + F E + + V
Sbjct: 77 IGRGAFGEV---QLVRHKSTRKVYAMKLL--SKFEMIKRSDSAFFWEERDIMAFANSPWV 131
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSL----DRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
VQL + +V EYMP G L + P++ W + + + A ++
Sbjct: 132 VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK-------WARFYTAEVVLA--LD 182
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H+ + +H D+KP N+LLD + K++DFG KE V GT YI+P
Sbjct: 183 AIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISP 238
Query: 239 ELISRNFGT--VSCKSDVYGFGMVLLEMAGG 267
E++ G + D + G+ L EM G
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 26/220 (11%)
Query: 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIH-------HV 120
H K+G G FGSV+K + G I ++ SK ++E + + ++ H
Sbjct: 14 HELEKIGSGEFGSVFKCVKRLDGCIYA--IKRSKKPLAGSVDEQNALREVYAHAVLGQHS 71
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
+VV+ +E + EY GSL + +L ++ L RG+ Y+
Sbjct: 72 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVS-------DFGLAKFHPKENDFVSIS------ 227
H+ + ++H DIKP NI + IP + D+ K K D ++
Sbjct: 132 HS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ 188
Query: 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
G ++A E++ N+ + K+D++ + ++ AG
Sbjct: 189 VEEGDSRFLANEVLQENYTHLP-KADIFALALTVVCAAGA 227
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 93 AVKMLENS---KFSAEEF-------INEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYEY 141
AVK+++ + FSAEE + EV + ++ H N++QL + LV++
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 105
Query: 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD 201
M G L F + +L ++ ++ I LH + I+H D+KP NILLD
Sbjct: 106 MKKGEL----FDYLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLD 158
Query: 202 HNFIPKVSDFGLA-KFHPKENDFVSISATRGTIGYIAPELI----SRNFGTVSCKSDVYG 256
+ K++DFG + + P E + GT Y+APE+I + N + D++
Sbjct: 159 DDMNIKLTDFGFSCQLDPGEK----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
Query: 257 FGMVLLEMAGG 267
G+++ + G
Sbjct: 215 TGVIMYTLLAG 225
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 34/211 (16%)
Query: 73 LGQGGFGSVYKGQL----QTGGLIAVKMLENSKF------SAEEFINEVSTIGRIHHVNV 122
+G+G FG V QL T + A+K+L SKF + F E + + V
Sbjct: 82 IGRGAFGEV---QLVRHKSTRKVYAMKLL--SKFEMIKRSDSAFFWEERDIMAFANSPWV 136
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSL----DRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
VQL + +V EYMP G L + P++ W + + + A ++
Sbjct: 137 VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK-------WARFYTAEVVLA--LD 187
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H+ + +H D+KP N+LLD + K++DFG KE V GT YI+P
Sbjct: 188 AIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISP 243
Query: 239 ELISRNFGT--VSCKSDVYGFGMVLLEMAGG 267
E++ G + D + G+ L EM G
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI-----HHVNVVQLL 126
+G+G + V +L+ T + A+++++ + +E I+ V T + +H +V L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
S+ V EY+ G L H+ R + L E + + + YLH +
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEISLALNYLH---ER 172
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNF 245
I++ D+K N+LLD K++D+G+ K + D + S GT YIAPE++ ++
Sbjct: 173 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDY 230
Query: 246 GTVSCKSDVYGFGMVLLEMAGGR 268
G D + G+++ EM GR
Sbjct: 231 G---FSVDWWALGVLMFEMMAGR 250
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 72 KLGQGGFGSVYKGQL-QTGGLIAVKMLENS--KFSAEEFINEVSTIGRIHHVN-VVQLLG 127
++G G G V+K + +TG +IAVK + S K + + ++ + + H +VQ G
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEK-LHEVALGTARGIEYLHNGCDV 186
+ + E M G+ + + R Q E+ L ++ + + + YL V
Sbjct: 92 TFITNTDVFIAMELM--GTCAEKL---KKRMQGPIPERILGKMTVAIVKALYYLKEKHGV 146
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
+H D+KP NILLD K+ DFG++ + D + + G Y+APE I
Sbjct: 147 --IHRDVKPSNILLDERGQIKLCDFGISG---RLVDDKAKDRSAGCAAYMAPERIDPPDP 201
Query: 247 T---VSCKSDVYGFGMVLLEMAGGR 268
T ++DV+ G+ L+E+A G+
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 34/211 (16%)
Query: 73 LGQGGFGSVYKGQL----QTGGLIAVKMLENSKF------SAEEFINEVSTIGRIHHVNV 122
+G+G FG V QL T + A+K+L SKF + F E + + V
Sbjct: 82 IGRGAFGEV---QLVRHKSTRKVYAMKLL--SKFEMIKRSDSAFFWEERDIMAFANSPWV 136
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSL----DRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
VQL + +V EYMP G L + P++ W + + + A ++
Sbjct: 137 VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK-------WARFYTAEVVLA--LD 187
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
+H+ + +H D+KP N+LLD + K++DFG KE V GT YI+P
Sbjct: 188 AIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISP 243
Query: 239 ELISRNFGT--VSCKSDVYGFGMVLLEMAGG 267
E++ G + D + G+ L EM G
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 68 HFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVN----- 121
+F LG+G FG V + + T L AVK+L+ ++ + R+ +
Sbjct: 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF 82
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV--ALGTARGIEY 179
+ QL + V EY+ G L H+ Q +++ H V A A G+ +
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHI------QQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 180 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN--DFVSISATRGTIGYIA 237
L + I++ D+K N++LD K++DFG+ KEN D V+ GT YIA
Sbjct: 137 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMC----KENIWDGVTTKXFCGTPDYIA 189
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
PE+I+ + D + FG++L EM G+
Sbjct: 190 PEIIA--YQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 36/232 (15%)
Query: 53 MPKRYSYPQIIAMTNHFTHK--LGQGGFGSVYKGQLQ-TGGLIAVKMLE--NSKFSAEEF 107
MPKR Y +++ F K LG+G +G V + TG ++A+K +E + A
Sbjct: 1 MPKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 108 INEVSTIGRIHHVNVVQLLGF----CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCW 163
+ E+ + H N++ + E + + + L R + Q L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSD 111
Query: 164 EKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF------- 216
+ + T R ++ LH G +V +H D+KP N+L++ N KV DFGLA+
Sbjct: 112 DHIQYFIYQTLRAVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 217 --HP--KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
P +++ ATR Y APE++ + S DV+ G +L E+
Sbjct: 169 NSEPTGQQSGMTEXVATR---WYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 36/232 (15%)
Query: 53 MPKRYSYPQIIAMTNHFTHK--LGQGGFGSVYKGQLQ-TGGLIAVKMLE--NSKFSAEEF 107
MPKR Y +++ F K LG+G +G V + TG ++A+K +E + A
Sbjct: 1 MPKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 108 INEVSTIGRIHHVNVVQLLGF----CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCW 163
+ E+ + H N++ + E + + + L R + Q L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSD 111
Query: 164 EKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF------- 216
+ + T R ++ LH G +V +H D+KP N+L++ N KV DFGLA+
Sbjct: 112 DHIQYFIYQTLRAVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 217 --HP--KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
P +++ ATR Y APE++ + S DV+ G +L E+
Sbjct: 169 NSEPTGQQSGMTEYVATR---WYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 68 HFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFIN----EVSTIGRIHHVNV 122
+F LG+G FG V + T L A+K+L+ ++ + E + +
Sbjct: 22 NFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPF 81
Query: 123 VQLLGFCSEGSKRA-LVYEYMPNGSLDRHV--FPKESRGQSLCWEKLHEVALGTARGIEY 179
+ L C + R V EY+ G L H+ K Q++ + A + G+ +
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY------AAEISIGLFF 135
Query: 180 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 239
LH I++ D+K N++LD K++DFG+ K H D V+ GT YIAPE
Sbjct: 136 LHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEH--MMDGVTTREFCGTPDYIAPE 190
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
+I+ + D + +G++L EM G+
Sbjct: 191 IIA--YQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 26/203 (12%)
Query: 72 KLGQGGFGSVYKGQLQTGG-LIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLL 126
+LG G +G V+K + + G L AVK + ++ +++ +G H V+L
Sbjct: 64 RLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLE 123
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSL----CWEKLHEVALGTARGIEYLHN 182
EG L E + SL +H E+ G SL W L + L A +LH+
Sbjct: 124 QAWEEGGILYLQTE-LCGPSLQQHC---EAWGASLPEAQVWGYLRDTLLALA----HLHS 175
Query: 183 GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 242
++H D+KP NI L K+ DFGL + + G Y+APEL+
Sbjct: 176 ---QGLVHLDVKPANIFLGPRGRCKLGDFGLLV---ELGTAGAGEVQEGDPRYMAPELLQ 229
Query: 243 RNFGTVSCKSDVYGFGMVLLEMA 265
++GT +DV+ G+ +LE+A
Sbjct: 230 GSYGTA---ADVFSLGLTILEVA 249
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 68 HFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVN----- 121
+F LG+G FG V + + T L AVK+L+ ++ + R+ +
Sbjct: 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF 403
Query: 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV--ALGTARGIEY 179
+ QL + V EY+ G L H+ Q +++ H V A A G+ +
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHI------QQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 180 LHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN--DFVSISATRGTIGYIA 237
L + I++ D+K N++LD K++DFG+ KEN D V+ GT YIA
Sbjct: 458 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMC----KENIWDGVTTKXFCGTPDYIA 510
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268
PE+I+ + D + FG++L EM G+
Sbjct: 511 PEIIA--YQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 40/230 (17%)
Query: 72 KLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLG 127
+LG+G F V + ++ G A K++ K SA ++ E + H N+V+L
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQ---SLCWEKLHEVALGTARGIEYLHNGC 184
SE L+++ + G L + +E + S C +++ E L + H
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL-------HCHQ-- 139
Query: 185 DVCILHFDIKPHNILLDHNF---IPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 241
+ ++H D+KP N+LL K++DFGLA E + + GT GY++PE++
Sbjct: 140 -MGVVHRDLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVL 196
Query: 242 SRN-FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQ 290
++ +G D++ G++L + G Y P W DQ
Sbjct: 197 RKDPYGK---PVDLWACGVILYILLVG--------------YPPFWDEDQ 229
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENS---KFSAEEFINEVSTIGRIHHVNVV---QL 125
+G G +G V + + TG +A+K + N+ +A+ + E+ + H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
L + VY + D H S Q L E + RG++Y+H+
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQ- 178
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK---FHPKENDFVSISATRGTIGYIAPELIS 242
++H D+KP N+L++ N K+ DFG+A+ P E+ + ++ T Y APEL+
Sbjct: 179 --VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF-MTEYVATRWYRAPELML 235
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGGRR 269
+ + D++ G + EM R+
Sbjct: 236 -SLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 73 LGQGGFG-SVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
+G G FG + Q+ L+AVK +E + E E+ + H N+V+
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+ A+V EY G L F + ++ G+ Y H VC H
Sbjct: 86 PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYCH-AMQVC--HR 138
Query: 192 DIKPHNILLDHNFIP--KVSDFGLAK---FHPKENDFVSISATRGTIGYIAPE-LISRNF 245
D+K N LLD + P K+ DFG +K H + +T GT YIAPE L+ + +
Sbjct: 139 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP------KSTVGTPAYIAPEVLLKKEY 192
Query: 246 -GTVSCKSDVYGFGMVLLEMAGG 267
G V +DV+ G+ L M G
Sbjct: 193 DGKV---ADVWSCGVTLYVMLVG 212
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENS---KFSAEEFINEVSTIGRIHHVNVV---QL 125
+G G +G V + + TG +A+K + N+ +A+ + E+ + H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD 185
L + VY + D H S Q L E + RG++Y+H+
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQ- 179
Query: 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK---FHPKENDFVSISATRGTIGYIAPELIS 242
++H D+KP N+L++ N K+ DFG+A+ P E+ + ++ T Y APEL+
Sbjct: 180 --VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF-MTEYVATRWYRAPELM- 235
Query: 243 RNFGTVSCKSDVYGFGMVLLEMAGGRR 269
+ + D++ G + EM R+
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 73 LGQGGFG-SVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
+G G FG + Q+ L+AVK +E + A E+ + H N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+ A+V EY G L F + ++ G+ Y H VC H
Sbjct: 87 PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYCH-AMQVC--HR 139
Query: 192 DIKPHNILLDHNFIP--KVSDFGLAK---FHPKENDFVSISATRGTIGYIAPE-LISRNF 245
D+K N LLD + P K+ DFG +K H + +T GT YIAPE L+ + +
Sbjct: 140 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK------STVGTPAYIAPEVLLKKEY 193
Query: 246 -GTVSCKSDVYGFGMVLLEMAGG 267
G V +DV+ G+ L M G
Sbjct: 194 DGKV---ADVWSCGVTLYVMLVG 213
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQ 124
+F KL + G ++KG+ Q G I VK+L+ +S + +F E + H NV+
Sbjct: 13 NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 125 LLGFCSE--GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV--ALGTARGIEYL 180
+LG C L+ +MP GSL + G + ++ V AL ARG+ +L
Sbjct: 72 VLGACQSPPAPHPTLITHWMPYGSL----YNVLHEGTNFVVDQSQAVKFALDMARGMAFL 127
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 240
H + I + ++++D + ++S KF F S ++APE
Sbjct: 128 HT-LEPLIPRHALNSRSVMIDEDMTARIS-MADVKF-----SFQSPGRMYAP-AWVAPEA 179
Query: 241 ISRNFGTVSCKS-DVYGFGMVLLEM 264
+ + + +S D++ F ++L E+
Sbjct: 180 LQKKPEDTNRRSADMWSFAVLLWEL 204
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 19/185 (10%)
Query: 64 AMTNHFT--HKLGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHV 120
A+++ F +LG+G VY+ Q T A+K+L+ + + E+ + R+ H
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT-VDKKIVRTEIGVLLRLSHP 108
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
N+++L ++ +LV E + G L + K + + + ++ + YL
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL----EAVAYL 164
Query: 181 H-NGCDVCILHFDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 236
H NG I+H D+KP N+L + K++DFGL+K + V + GT GY
Sbjct: 165 HENG----IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ---VLMKTVCGTPGYC 217
Query: 237 APELI 241
APE++
Sbjct: 218 APEIL 222
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 35/212 (16%)
Query: 54 PKRYSYPQIIAMTNHFTHK------LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEE 106
PK + A ++ K LG G FG V+ + + VK ++ K +
Sbjct: 7 PKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDC 66
Query: 107 FIN---------EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGS-----LDRHVF 152
+I E++ + R+ H N++++L LV E +G +DRH
Sbjct: 67 WIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR 126
Query: 153 PKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFG 212
E + + L +A G L + I+H DIK NI++ +F K+ DFG
Sbjct: 127 LDEPLASYIFRQ------LVSAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFG 175
Query: 213 LAKFHPKENDFVSISATRGTIGYIAPELISRN 244
A + + F + GTI Y APE++ N
Sbjct: 176 SAAYLERGKLFYTFC---GTIEYCAPEVLMGN 204
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 54 PKRYSYPQIIAMTNHFTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFINEVS 112
PK+Y+ ++ LG G G V + +TG A+K+L +S + +E +
Sbjct: 2 PKKYAVTDDYQLSKQV---LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQ 58
Query: 113 TIGRIHHVNVVQLLGFCSEGSKRAL--VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVA 170
G H V ++ + G KR L + E M G L + +E Q+ + E+
Sbjct: 59 ASGGPHIVCILDVYENMHHG-KRCLLIIMECMEGGELFSRI--QERGDQAFTEREAAEIM 115
Query: 171 LGTARGIEYLHNGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSIS 227
I++LH+ I H D+KP N+L + + + K++DFG A KE ++
Sbjct: 116 RDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFA----KETTQNALQ 168
Query: 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
T Y+APE++ SC D++ G+++ + G
Sbjct: 169 TPCYTPYYVAPEVLGPEKYDKSC--DMWSLGVIMYILLCG 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 54 PKRYSYPQIIAMTNHFTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFINEVS 112
PK+Y+ ++ LG G G V + +TG A+K+L +S + +E +
Sbjct: 21 PKKYAVTDDYQLSKQV---LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQ 77
Query: 113 TIGRIHHVNVVQLLGFCSEGSKRAL--VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVA 170
G H V ++ + G KR L + E M G L + +E Q+ + E+
Sbjct: 78 ASGGPHIVCILDVYENMHHG-KRCLLIIMECMEGGELFSRI--QERGDQAFTEREAAEIM 134
Query: 171 LGTARGIEYLHNGCDVCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSIS 227
I++LH+ I H D+KP N+L + + + K++DFG A KE ++
Sbjct: 135 RDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFA----KETTQNALQ 187
Query: 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVL 261
T Y+APE++ SC D++ G+++
Sbjct: 188 TPCYTPYYVAPEVLGPEKYDKSC--DMWSLGVIM 219
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 85/203 (41%), Gaps = 24/203 (11%)
Query: 73 LGQGGFG-SVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
+G G FG + Q+ L+AVK +E + E E+ + H N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+ A+V EY G L F + ++ G+ Y H VC H
Sbjct: 87 PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYCH-AMQVC--HR 139
Query: 192 DIKPHNILLDHNFIP--KVSDFGLAK---FHPKENDFVSISATRGTIGYIAPE-LISRNF 245
D+K N LLD + P K+ FG +K H + D T GT YIAPE L+ + +
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKD------TVGTPAYIAPEVLLKKEY 193
Query: 246 -GTVSCKSDVYGFGMVLLEMAGG 267
G V +DV+ G+ L M G
Sbjct: 194 DGKV---ADVWSCGVTLYVMLVG 213
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 24/203 (11%)
Query: 73 LGQGGFG-SVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
+G G FG + Q L+AVK +E + E E+ + H N+V+
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+ A+V EY G L F + ++ G+ Y H + + H
Sbjct: 87 PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYAHA---MQVAHR 139
Query: 192 DIKPHNILLDHNFIP--KVSDFGLAK---FHPKENDFVSISATRGTIGYIAPE-LISRNF 245
D+K N LLD + P K++DFG +K H + V GT YIAPE L+ + +
Sbjct: 140 DLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV------GTPAYIAPEVLLKKEY 193
Query: 246 -GTVSCKSDVYGFGMVLLEMAGG 267
G V +DV+ G+ L M G
Sbjct: 194 DGKV---ADVWSCGVTLYVMLVG 213
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 20/200 (10%)
Query: 70 THKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAE---EFINEVSTIGRIHHV-NVVQ 124
+ +LG+G F V + TG A K L+ + + E ++E++ + V+
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
L S+ L+ EY G + P+ + + + + G+ YLH
Sbjct: 94 LHEVYENTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQNN 151
Query: 185 DVCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 240
I+H D+KP NILL + P K+ DFG+++ K + GT Y+APE+
Sbjct: 152 ---IVHLDLKPQNILLS-SIYPLGDIKIVDFGMSR---KIGHACELREIMGTPEYLAPEI 204
Query: 241 ISRNFGTVSCKSDVYGFGMV 260
+ N+ ++ +D++ G++
Sbjct: 205 L--NYDPITTATDMWNIGII 222
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
LG G G V + +T A+KML++ + E H V +V +
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 129
Query: 132 GSKRAL-VYEYMPNGSLDRHVFPKESRG-QSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
G K L V E + G L + + RG Q+ + E+ I+YLH+ + I
Sbjct: 130 GRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 183
Query: 190 HFDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
H D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKY 240
Query: 247 TVSCKSDVYGFGMVLLEMAGG 267
SC D++ G+++ + G
Sbjct: 241 DKSC--DMWSLGVIMYILLCG 259
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
LG G G V + +T A+KML++ + E H V +V +
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 89
Query: 132 GSKRAL-VYEYMPNGSLDRHVFPKESRG-QSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
G K L V E + G L + + RG Q+ + E+ I+YLH+ + I
Sbjct: 90 GRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 143
Query: 190 HFDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
H D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 144 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKY 200
Query: 247 TVSCKSDVYGFGMVLLEMAGG 267
SC D++ G+++ + G
Sbjct: 201 DKSC--DMWSLGVIMYILLCG 219
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
LG G G V + +T A+KML++ + E H V +V +
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 85
Query: 132 GSKRAL-VYEYMPNGSLDRHVFPKESRG-QSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
G K L V E + G L + + RG Q+ + E+ I+YLH+ + I
Sbjct: 86 GRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 139
Query: 190 HFDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
H D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKY 196
Query: 247 TVSCKSDVYGFGMVLLEMAGG 267
SC D++ G+++ + G
Sbjct: 197 DKSC--DMWSLGVIMYILLCG 215
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
LG G G V + +T A+KML++ + E H V +V +
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 90
Query: 132 GSKRAL-VYEYMPNGSLDRHVFPKESRG-QSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
G K L V E + G L + + RG Q+ + E+ I+YLH+ + I
Sbjct: 91 GRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 144
Query: 190 HFDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
H D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 145 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKY 201
Query: 247 TVSCKSDVYGFGMVLLEMAGG 267
SC D++ G+++ + G
Sbjct: 202 DKSC--DMWSLGVIMYILLCG 220
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
LG G G V + +T A+KML++ + E H V +V +
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 85
Query: 132 GSKRAL-VYEYMPNGSLDRHVFPKESRG-QSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
G K L V E + G L + + RG Q+ + E+ I+YLH+ + I
Sbjct: 86 GRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 139
Query: 190 HFDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
H D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKY 196
Query: 247 TVSCKSDVYGFGMVLLEMAGG 267
SC D++ G+++ + G
Sbjct: 197 DKSC--DMWSLGVIMYILLCG 215
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
LG G G V + +T A+KML++ + E H V +V +
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 84
Query: 132 GSKRAL-VYEYMPNGSLDRHVFPKESRG-QSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
G K L V E + G L + + RG Q+ + E+ I+YLH+ + I
Sbjct: 85 GRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 138
Query: 190 HFDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
H D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 139 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKY 195
Query: 247 TVSCKSDVYGFGMVLLEMAGG 267
SC D++ G+++ + G
Sbjct: 196 DKSC--DMWSLGVIMYILLCG 214
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
LG G G V + +T A+KML++ + E H V +V +
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 83
Query: 132 GSKRAL-VYEYMPNGSLDRHVFPKESRG-QSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
G K L V E + G L + + RG Q+ + E+ I+YLH+ + I
Sbjct: 84 GRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 137
Query: 190 HFDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
H D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKY 194
Query: 247 TVSCKSDVYGFGMVLLEMAGG 267
SC D++ G+++ + G
Sbjct: 195 DKSC--DMWSLGVIMYILLCG 213
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
LG G G V + +T A+KML++ + E H V +V +
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 91
Query: 132 GSKRAL-VYEYMPNGSLDRHVFPKESRG-QSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
G K L V E + G L + + RG Q+ + E+ I+YLH+ + I
Sbjct: 92 GRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 145
Query: 190 HFDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
H D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 146 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKY 202
Query: 247 TVSCKSDVYGFGMVLLEMAGG 267
SC D++ G+++ + G
Sbjct: 203 DKSC--DMWSLGVIMYILLCG 221
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 93 AVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAL-VYEYMPNGSLDRHV 151
A+KML++ + E H V +V + G K L V E + G L +
Sbjct: 61 ALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 120
Query: 152 FPKESRG-QSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH---NFIPK 207
+ RG Q+ + E+ I+YLH+ + I H D+KP N+L N I K
Sbjct: 121 ---QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILK 174
Query: 208 VSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
++DFG AK N S++ T Y+APE++ SC D++ G+++ + G
Sbjct: 175 LTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSC--DMWSLGVIMYILLCG 229
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 24/169 (14%)
Query: 109 NEVSTIGRIHHVNVVQLLG--FCSEGSKRALVYEYMPNG------SLDRHVFPKESRGQS 160
E+ + R+ H NV+QL+ + E K +V EY G S+ FP
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFP------- 107
Query: 161 LCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPK 219
+C + H G+EYLH+ I+H DIKP N+LL K+S G+A+ HP
Sbjct: 108 VC--QAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162
Query: 220 ENDFVSISATRGTIGYIAPELISRNFGTVS-CKSDVYGFGMVLLEMAGG 267
D + ++G+ + PE I+ T S K D++ G+ L + G
Sbjct: 163 AAD-DTCRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
LG G G V + +T A+KML++ + E H V +V +
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 135
Query: 132 GSKRAL-VYEYMPNGSLDRHVFPKESRG-QSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
G K L V E + G L + + RG Q+ + E+ I+YLH+ + I
Sbjct: 136 GRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 189
Query: 190 HFDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
H D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 190 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKY 246
Query: 247 TVSCKSDVYGFGMVLLEMAGG 267
SC D++ G+++ + G
Sbjct: 247 DKSC--DMWSLGVIMYILLCG 265
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
LG G G V + +T A+KML++ + E H V +V +
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 83
Query: 132 GSKRAL-VYEYMPNGSLDRHVFPKESRG-QSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
G K L V E + G L + + RG Q+ + E+ I+YLH+ + I
Sbjct: 84 GRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIA 137
Query: 190 HFDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
H D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTEPCYTPYYVAPEVLGPEKY 194
Query: 247 TVSCKSDVYGFGMVLLEMAGG 267
SC D++ G+++ + G
Sbjct: 195 DKSC--DMWSLGVIMYILLCG 213
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 16/201 (7%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 127
LG+GGF ++ T + A K++ S E+ E+S + H +VV G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
F + +V E SL R ++L + G +YLH
Sbjct: 83 FFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 135
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++S+
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKK--G 191
Query: 248 VSCKSDVYGFGMVLLEMAGGR 268
S + DV+ G ++ + G+
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGK 212
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 16/201 (7%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 127
LG+GGF ++ T + A K++ S E+ E+S + H +VV G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
F + +V E SL R ++L + G +YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 137
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++S+
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKK--G 193
Query: 248 VSCKSDVYGFGMVLLEMAGGR 268
S + DV+ G ++ + G+
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGK 214
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 16/201 (7%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 127
LG+GGF ++ T + A K++ S E+ E+S + H +VV G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
F + +V E SL R ++L + G +YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 137
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++S+
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKK--G 193
Query: 248 VSCKSDVYGFGMVLLEMAGGR 268
S + DV+ G ++ + G+
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGK 214
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 16/201 (7%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 127
LG+GGF ++ T + A K++ S E+ E+S + H +VV G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
F + +V E SL R ++L + G +YLH
Sbjct: 107 FFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 159
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++S+
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGH- 216
Query: 248 VSCKSDVYGFGMVLLEMAGGR 268
S + DV+ G ++ + G+
Sbjct: 217 -SFEVDVWSIGCIMYTLLVGK 236
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 85/206 (41%), Gaps = 21/206 (10%)
Query: 69 FTHKLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQ 124
F ++G+G F +VYKG +T +A L++ K + E F E + + H N+V+
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 125 LLGFCSEGSKR----ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL 180
K LV E +G+L ++ R + + L +G+++L
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYL----KRFKVXKIKVLRSWCRQILKGLQFL 145
Query: 181 HNGCDVCILHFDIKPHNILLD-HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 239
H I+H D+K NI + K+ D GLA K F A GT + APE
Sbjct: 146 HTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATL--KRASFA--KAVIGTPEFXAPE 200
Query: 240 LISRNFGTVSCKSDVYGFGMVLLEMA 265
+ DVY FG LE A
Sbjct: 201 XYEEKYDE---SVDVYAFGXCXLEXA 223
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 16/201 (7%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 127
LG+GGF ++ T + A K++ S E+ E+S + H +VV G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
F + +V E SL R ++L + G +YLH
Sbjct: 89 FFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 141
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++S+
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKK--G 197
Query: 248 VSCKSDVYGFGMVLLEMAGGR 268
S + DV+ G ++ + G+
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGK 218
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 16/201 (7%)
Query: 73 LGQGGFGSVYK-GQLQTGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 127
LG+GGF ++ T + A K++ S E+ E+S + H +VV G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
F + +V E SL R ++L + G +YLH
Sbjct: 109 FFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 161
Query: 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 247
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++S+
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKK--G 217
Query: 248 VSCKSDVYGFGMVLLEMAGGR 268
S + DV+ G ++ + G+
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGK 238
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 19/120 (15%)
Query: 155 ESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214
E R +C LH + + A +E+LH+ ++H D+KP NI + + KV DFGL
Sbjct: 159 EDREHGVC---LH-IFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLV 211
Query: 215 KFHPKEND----------FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264
++ + + + GT Y++PE I N S K D++ G++L E+
Sbjct: 212 TAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLILFEL 269
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 41/209 (19%)
Query: 73 LGQGGFGS-VYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLGFCS 130
LG G G+ VY+G +AVK + FS + EV + H NV++ FC+
Sbjct: 32 LGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFAD--REVQLLRESDEHPNVIRY--FCT 86
Query: 131 EGSKRALVYEYMP----NGSLDRHVFPKESRGQSLCWEKLHEVAL--GTARGIEYLHNGC 184
E ++ ++Y+ +L +V K+ L + L T G+ +LH+
Sbjct: 87 EKDRQ---FQYIAIELCAATLQEYVEQKD-----FAHLGLEPITLLQQTTSGLAHLHS-- 136
Query: 185 DVCILHFDIKPHNILLD----HNFIPK-VSDFGLA-KFHPKENDFVSISATRGTIGYIAP 238
+ I+H D+KPHNIL+ H I +SDFGL K + F S GT G+IAP
Sbjct: 137 -LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
Query: 239 ELISRNFGTVSCKS------DVYGFGMVL 261
E++S + CK D++ G V
Sbjct: 196 EMLSED-----CKENPTYTVDIFSAGCVF 219
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 24/203 (11%)
Query: 73 LGQGGFG-SVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131
+G G FG + Q+ L+AVK +E + E E+ + H N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHF 191
+ A+V EY G L F + ++ G+ Y H VC H
Sbjct: 87 PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYCH-AMQVC--HR 139
Query: 192 DIKPHNILLDHNFIP--KVSDFGLAK---FHPKENDFVSISATRGTIGYIAPE-LISRNF 245
D+K N LLD + P K+ FG +K H + +T GT YIAPE L+ + +
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK------STVGTPAYIAPEVLLKKEY 193
Query: 246 -GTVSCKSDVYGFGMVLLEMAGG 267
G V +DV+ G+ L M G
Sbjct: 194 DGKV---ADVWSCGVTLYVMLVG 213
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 21/220 (9%)
Query: 54 PKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEEFINEVS 112
P Y Y + + H +LG+G FG V++ + QTG AVK + F EE +
Sbjct: 62 PVDYEYREEVHWMTH-QPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELV---- 116
Query: 113 TIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALG 172
+ +V L G EG + E + GSL + + + E LG
Sbjct: 117 ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLG 171
Query: 173 TA-RGIEYLHNGCDVCILHFDIKPHNILLDHNFI-PKVSDFGLA-KFHPK--ENDFVSIS 227
A G+EYLH ILH D+K N+LL + + DFG A P ++
Sbjct: 172 QALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 228
Query: 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
GT ++APE++ K D++ ++L M G
Sbjct: 229 YIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNG 266
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 20/150 (13%)
Query: 68 HFTHKLGQGGFGSVY-KGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVN----- 121
H KLG G F +V+ +Q +A+K++++++ E ++E+ + + + +
Sbjct: 24 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPN 83
Query: 122 ---VVQLLGFCS----EGSKRALVYEYMPNGSLDRHVFPKESRGQSL-CWEKLHEVALGT 173
VVQLL G+ +V+E + + L + + +G L C +K+ + L
Sbjct: 84 REMVVQLLDDFKISGVNGTHICMVFEVLGHHLL-KWIIKSNYQGLPLPCVKKIIQQVL-- 140
Query: 174 ARGIEYLHNGCDVCILHFDIKPHNILLDHN 203
+G++YLH C I+H DIKP NILL N
Sbjct: 141 -QGLDYLHTKCR--IIHTDIKPENILLSVN 167
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 40/230 (17%)
Query: 72 KLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLG 127
+LG+G F V + ++ G A ++ K SA ++ E + H N+V+L
Sbjct: 18 ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 128 FCSEGSKRALVYEYMPNGSLDRHVFPKESRGQ---SLCWEKLHEVALGTARGIEYLHNGC 184
SE L+++ + G L + +E + S C +++ E L + H
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL-------HCHQ-- 128
Query: 185 DVCILHFDIKPHNILLDHNF---IPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 241
+ ++H ++KP N+LL K++DFGLA E + + GT GY++PE++
Sbjct: 129 -MGVVHRNLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVL 185
Query: 242 SRN-FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQ 290
++ +G D++ G++L + G Y P W DQ
Sbjct: 186 RKDPYGK---PVDLWACGVILYILLVG--------------YPPFWDEDQ 218
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 20/150 (13%)
Query: 68 HFTHKLGQGGFGSVY-KGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVN----- 121
H KLG G F +V+ +Q +A+K++++++ E ++E+ + + + +
Sbjct: 40 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPN 99
Query: 122 ---VVQLLGFCS----EGSKRALVYEYMPNGSLDRHVFPKESRGQSL-CWEKLHEVALGT 173
VVQLL G+ +V+E + + L + + +G L C +K+ + L
Sbjct: 100 REMVVQLLDDFKISGVNGTHICMVFEVLGHHLL-KWIIKSNYQGLPLPCVKKIIQQVL-- 156
Query: 174 ARGIEYLHNGCDVCILHFDIKPHNILLDHN 203
+G++YLH C I+H DIKP NILL N
Sbjct: 157 -QGLDYLHTKCR--IIHTDIKPENILLSVN 183
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 72 KLGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHH-VNVVQLLGFC 129
KLG+G + V++ + + VK+L+ K + E+ + + N++ L
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVK--KNKIKREIKILENLRGGPNIITLADIV 101
Query: 130 SEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187
+ R ALV+E++ N + Q+L + + ++Y H+ +
Sbjct: 102 KDPVSRTPALVFEHVNNTDF-------KQLYQTLTDYDIRFYMYEILKALDYCHS---MG 151
Query: 188 ILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 246
I+H D+KPHN+++DH ++ D+GLA+F+ ++ A+R G PEL+ ++
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQ 207
Query: 247 TVSCKSDVYGFGMVLLEM 264
D++ G +L M
Sbjct: 208 MYDYSLDMWSLGCMLASM 225
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 91/220 (41%), Gaps = 21/220 (9%)
Query: 54 PKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEEFINEVS 112
P Y Y + + H ++G+G FG V++ + QTG AVK + F EE +
Sbjct: 48 PVDYEYREEVHWMTH-QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELV---- 102
Query: 113 TIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALG 172
+ +V L G EG + E + GSL + + + E LG
Sbjct: 103 ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLG 157
Query: 173 TA-RGIEYLHNGCDVCILHFDIKPHNILLDHNFI-PKVSDFGLA-KFHPK--ENDFVSIS 227
A G+EYLH ILH D+K N+LL + + DFG A P ++
Sbjct: 158 QALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214
Query: 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
GT ++APE++ K D++ ++L M G
Sbjct: 215 YIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 91/220 (41%), Gaps = 21/220 (9%)
Query: 54 PKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEEFINEVS 112
P Y Y + + H ++G+G FG V++ + QTG AVK + F EE +
Sbjct: 64 PVDYEYREEVHWMTH-QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELV---- 118
Query: 113 TIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALG 172
+ +V L G EG + E + GSL + + + E LG
Sbjct: 119 ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLG 173
Query: 173 TA-RGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLA-KFHPK--ENDFVSIS 227
A G+EYLH ILH D+K N+LL + + DFG A P ++
Sbjct: 174 QALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 230
Query: 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
GT ++APE++ K D++ ++L M G
Sbjct: 231 YIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNG 268
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI-NEVSTIGRIH-HVNVVQLLGFC 129
LG+G V L T AVK++E + EV + + H NV++L+ F
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
E + LV+E M GS+ H+ + + + V A +++LHN I
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKRRHFNEL----EASVVVQDVASALDFLHNK---GIA 133
Query: 190 HFDIKPHNILLDH--NFIP-KVSDFGLAKFHPKENDFVSISATR-----GTIGYIAPELI 241
H D+KP NIL +H P K+ DFGL D IS G+ Y+APE++
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 242 ---SRNFGTVSCKSDVYGFGMVLLEMAGG 267
S + D++ G++L + G
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 16/148 (10%)
Query: 118 HHVNVVQLLGFCSEGSKRAL-VYEYMPNGSLDRHVFPKESRG-QSLCWEKLHEVALGTAR 175
H V +V + G K L V E + G L + + RG Q+ + E+
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRI---QDRGDQAFTEREASEIXKSIGE 172
Query: 176 GIEYLHNGCDVCILHFDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGT 232
I+YLH+ + I H D+KP N+L N I K++DFG AK N S++ T
Sbjct: 173 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYT 226
Query: 233 IGYIAPELISRNFGTVSCKSDVYGFGMV 260
Y+APE++ SC D + G++
Sbjct: 227 PYYVAPEVLGPEKYDKSC--DXWSLGVI 252
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 115/281 (40%), Gaps = 59/281 (20%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 123 VQLLGFCSEGSKRALVYEYM-PNGSLDRHVFPK----ESRGQSLCWEKLHEVALGTARGI 177
++LL + L+ E M P L + + E +S W+ L +
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVL--------EAV 127
Query: 178 EYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYI 236
+ HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 128 RHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VYS 180
Query: 237 APELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKG 294
PE I R G + V+ G++L +M G P +++ +G
Sbjct: 181 PPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIRG 223
Query: 295 GDLELQNV-TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
Q V +E + +I WC+ ++ +DRP+ ++
Sbjct: 224 QVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 256
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 102/254 (40%), Gaps = 56/254 (22%)
Query: 47 RNQQSW-MPKRYSYPQIIAMTNHFTHKLGQGGFGSVYKG--QLQTGGLIAVKMLE--NSK 101
R W +P RY H +G G +G V + +L+ + K+L
Sbjct: 44 RPHSDWQIPDRYE----------IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDL 93
Query: 102 FSAEEFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEYMPNGSLDRHVFPKESRGQ 159
+ + E++ + R++H +VV++L + K +Y + D F K R
Sbjct: 94 IDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD---FKKLFRTP 150
Query: 160 SLCWEKLHEVAL--GTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK-- 215
E LH L G++Y+H+ ILH D+KP N L++ + KV DFGLA+
Sbjct: 151 VYLTE-LHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
Query: 216 -----------FHPKEND--FVSISATRG----------TIGYIAPELI--SRNFGTVSC 250
P+E+D V+ T+ T Y APELI N+
Sbjct: 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEA-- 264
Query: 251 KSDVYGFGMVLLEM 264
DV+ G + E+
Sbjct: 265 -IDVWSIGCIFAEL 277
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRI--HHVNVVQLL 126
++G GG V++ + + A+K + E + + + NE++ + ++ H +++L
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ +Y M G++D + + K+ + WE+ +E +H
Sbjct: 95 DY---EITDQYIYMVMECGNIDLNSWLKKKKSID-PWER----KSYWKNMLEAVHTIHQH 146
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI----- 241
I+H D+KP N L+ + K+ DFG+A + V + GT+ Y+ PE I
Sbjct: 147 GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 242 SRNFG----TVSCKSDVYGFGMVLLEMAGGR 268
SR G +S KSDV+ G +L M G+
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRI--HHVNVVQLL 126
++G GG V++ + + A+K + E + + + NE++ + ++ H +++L
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ +Y M G++D + + K+ + WE+ +E +H
Sbjct: 95 DY---EITDQYIYMVMECGNIDLNSWLKKKKSID-PWER----KSYWKNMLEAVHTIHQH 146
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI----- 241
I+H D+KP N L+ + K+ DFG+A + V + GT+ Y+ PE I
Sbjct: 147 GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 242 SRNFG----TVSCKSDVYGFGMVLLEMAGGR 268
SR G +S KSDV+ G +L M G+
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRI--HHVNVVQLL 126
++G GG V++ + + A+K + E + + + NE++ + ++ H +++L
Sbjct: 19 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ +Y M G++D + + K+ + WE+ +E +H
Sbjct: 79 DY---EITDQYIYMVMECGNIDLNSWLKKKKSID-PWER----KSYWKNMLEAVHTIHQH 130
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI----- 241
I+H D+KP N L+ + K+ DFG+A + V + GT+ Y+ PE I
Sbjct: 131 GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 189
Query: 242 SRNFG----TVSCKSDVYGFGMVLLEMAGGR 268
SR G +S KSDV+ G +L M G+
Sbjct: 190 SRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 127
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 128 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 180
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 181 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 223
Query: 294 GGDLELQNV-TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V +E + +I WC+ ++ +DRP+ ++
Sbjct: 224 GQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 257
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 154
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 155 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 207
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 208 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 250
Query: 294 GGDLELQNV-TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V +E + +I WC+ ++ +DRP+ ++
Sbjct: 251 GQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 284
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 119/313 (38%), Gaps = 50/313 (15%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKMLENS------------KFSAEEFINEVSTIGRIHHV 120
+ G +G+V G G +A+K + N+ F + + E+ + HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLH--EVALGTARGIE 178
N++ L + A+ Y+ L R + Q + H G+
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVT-ELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238
LH + ++H D+ P NILL N + DF LA+ + + R Y AP
Sbjct: 149 VLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---WYRAP 202
Query: 239 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFP-SWVYDQLNK---- 293
EL+ + F + D++ G V+ EM + KA F S Y+QLNK
Sbjct: 203 ELVMQ-FKGFTKLVDMWSAGCVMAEMF------------NRKALFRGSTFYNQLNKIVEV 249
Query: 294 GGDLELQNVTEIESMIARKLCMIGL-------WCIQVKAADRPSMTKVLEMLEGS----I 342
G ++++V S AR L W V AD ++ + +MLE + I
Sbjct: 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309
Query: 343 DDLQMPPRPFFSS 355
Q P+F S
Sbjct: 310 STEQALRHPYFES 322
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRI--HHVNVVQLL 126
++G GG V++ + + A+K + E + + + NE++ + ++ H +++L
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ +Y M G++D + + K+ + WE+ +E +H
Sbjct: 123 DY---EITDQYIYMVMECGNIDLNSWLKKKKSID-PWER----KSYWKNMLEAVHTIHQH 174
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI----- 241
I+H D+KP N L+ + K+ DFG+A + V + GT+ Y+ PE I
Sbjct: 175 GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 242 SRNFG----TVSCKSDVYGFGMVLLEMAGGR 268
SR G +S KSDV+ G +L M G+
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQ 124
+F KL + G ++KG+ Q G I VK+L+ +S + +F E + H NV+
Sbjct: 13 NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 125 LLGFCSE--GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV--ALGTARGIEYL 180
+LG C L+ + P GSL + G + ++ V AL ARG +L
Sbjct: 72 VLGACQSPPAPHPTLITHWXPYGSL----YNVLHEGTNFVVDQSQAVKFALDXARGXAFL 127
Query: 181 HNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 240
H + I + ++ +D + ++S + KF F S ++APE
Sbjct: 128 HT-LEPLIPRHALNSRSVXIDEDXTARISXADV-KF-----SFQSPGRXYAP-AWVAPEA 179
Query: 241 ISRNFGTVSCKS-DVYGFGMVLLEM 264
+ + + +S D + F ++L E+
Sbjct: 180 LQKKPEDTNRRSADXWSFAVLLWEL 204
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 120/317 (37%), Gaps = 58/317 (18%)
Query: 73 LGQGGFGSVYKGQLQTGGLIAVKMLENS------------KFSAEEFINEVSTIGRIHHV 120
+ G +G+V G G +A+K + N+ F + + E+ + HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 121 NVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLH------EVALGTA 174
N++ L + A+ Y+ L R + Q + H + LG
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVT-ELMRTDLAQVIHDQRIVISPQHIQYFMYHILLG-- 146
Query: 175 RGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 234
LH + ++H D+ P NILL N + DF LA+ + + R
Sbjct: 147 -----LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---W 198
Query: 235 YIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFP-SWVYDQLNK 293
Y APEL+ + F + D++ G V+ EM + KA F S Y+QLNK
Sbjct: 199 YRAPELVMQ-FKGFTKLVDMWSAGCVMAEMF------------NRKALFRGSTFYNQLNK 245
Query: 294 ----GGDLELQNVTEIESMIARKLCMIGL-------WCIQVKAADRPSMTKVLEMLEGS- 341
G ++++V S AR L W V AD ++ + +MLE +
Sbjct: 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNP 305
Query: 342 ---IDDLQMPPRPFFSS 355
I Q P+F S
Sbjct: 306 QRRISTEQALRHPYFES 322
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 50/244 (20%)
Query: 51 SWMPKRYSYPQIIAMTNHFTHKLGQGGFGSVYK--GQLQTGGLIAVKMLENSKFSAEEFI 108
W+ +RY +I++ LG+G FG V + + G +A+K+++N + E
Sbjct: 29 DWLQERY---EIVST-------LGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAAR 78
Query: 109 NEVSTIGRIHHVN------VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLC 162
E++ + +I+ + VQ+ + + +E + + D F K++
Sbjct: 79 LEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFD---FLKDNNYLPYP 135
Query: 163 WEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNIL-------LDHNFIPK-------- 207
++ +A + +++LH D + H D+KP NIL L +N K
Sbjct: 136 IHQVRHMAFQLCQAVKFLH---DNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKS 192
Query: 208 ----VSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 263
V DFG A F D S T Y APE+I + C DV+ G ++ E
Sbjct: 193 TAVRVVDFGSATF-----DHEHHSTIVSTRHYRAPEVILELGWSQPC--DVWSIGCIIFE 245
Query: 264 MAGG 267
G
Sbjct: 246 YYVG 249
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRI--HHVNVVQLL 126
++G GG V++ + + A+K + E + + + NE++ + ++ H +++L
Sbjct: 16 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ +Y M G++D + + K+ + WE+ +E +H
Sbjct: 76 DY---EITDQYIYMVMECGNIDLNSWLKKKKSID-PWER----KSYWKNMLEAVHTIHQH 127
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI----- 241
I+H D+KP N L+ + K+ DFG+A + V + GT+ Y+ PE I
Sbjct: 128 GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 242 SRNFG----TVSCKSDVYGFGMVLLEMAGGR 268
SR G +S KSDV+ G +L M G+
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 141
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 142 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 194
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 195 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 237
Query: 294 GGDLELQNV-TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V +E + +I WC+ ++ +DRP+ ++
Sbjct: 238 GQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 271
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 127
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 128 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 180
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 181 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 223
Query: 294 GGDLELQNV-TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V +E + +I WC+ ++ +DRP+ ++
Sbjct: 224 GQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 257
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRI--HHVNVVQLL 126
++G GG V++ + + A+K + E + + + NE++ + ++ H +++L
Sbjct: 15 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ +Y M G++D + + K+ + WE+ +E +H
Sbjct: 75 DY---EITDQYIYMVMECGNIDLNSWLKKKKSID-PWER----KSYWKNMLEAVHTIHQH 126
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI----- 241
I+H D+KP N L+ + K+ DFG+A + V + GT+ Y+ PE I
Sbjct: 127 GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 185
Query: 242 SRNFG----TVSCKSDVYGFGMVLLEMAGGR 268
SR G +S KSDV+ G +L M G+
Sbjct: 186 SRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 76 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 126
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 127 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 179
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 180 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 222
Query: 294 GGDLELQNV-TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V +E + +I WC+ ++ +DRP+ ++
Sbjct: 223 GQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 256
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 127
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 128 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 180
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 181 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 223
Query: 294 GGDLELQNV-TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V +E + +I WC+ ++ +DRP+ ++
Sbjct: 224 GQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 257
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 249
H D+KP NIL+ + + DFG+A E + T GT+ Y APE S + T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEK-LTQLGNTVGTLYYXAPERFSESHATY- 214
Query: 250 CKSDVYGFGMVLLEMAGG 267
++D+Y VL E G
Sbjct: 215 -RADIYALTCVLYECLTG 231
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 169
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 170 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 222
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 223 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 265
Query: 294 GGDLELQNVT-EIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V+ E + +I WC+ ++ +DRP+ ++
Sbjct: 266 GQVFFRQRVSXECQHLIR--------WCLALRPSDRPTFEEI 299
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 113/280 (40%), Gaps = 57/280 (20%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIH--HVNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 122
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 123 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 175
Query: 236 IAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295
PE I R + V+ G++L +M G P +++ +G
Sbjct: 176 SPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGD--------------IPFEHDEEIIRGQ 220
Query: 296 DLELQNV-TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
Q V +E + +I WC+ ++ +DRP+ ++
Sbjct: 221 VFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 252
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIH--HVNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 75 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 125
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 126 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 178
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 179 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 221
Query: 294 GGDLELQNV-TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V +E + +I WC+ ++ +DRP+ ++
Sbjct: 222 GQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 255
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 142
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 143 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 195
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 196 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 238
Query: 294 GGDLELQNV-TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V +E + +I WC+ ++ +DRP+ ++
Sbjct: 239 GQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 272
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 141
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 142 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 194
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 195 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 237
Query: 294 GGDLELQNVT-EIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V+ E + +I WC+ ++ +DRP+ ++
Sbjct: 238 GQVFFRQRVSXECQHLIR--------WCLALRPSDRPTFEEI 271
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 142
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 143 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 195
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 196 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 238
Query: 294 GGDLELQNVT-EIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V+ E + +I WC+ ++ +DRP+ ++
Sbjct: 239 GQVFFRQRVSXECQHLIR--------WCLALRPSDRPTFEEI 272
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 72 KLGQGGFGSVYKGQLQTGGLIAVKML---ENSKFSAEEFINEVSTIGRI--HHVNVVQLL 126
++G GG V++ + + A+K + E + + + NE++ + ++ H +++L
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186
+ +Y M G++D + + K+ + WE+ +E +H
Sbjct: 123 DY---EITDQYIYMVMECGNIDLNSWLKKKKSID-PWER----KSYWKNMLEAVHTIHQH 174
Query: 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI----- 241
I+H D+KP N L+ + K+ DFG+A + V + GT+ Y+ PE I
Sbjct: 175 GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 242 SRNFG----TVSCKSDVYGFGMVLLEMAGGR 268
SR G +S KSDV+ G +L M G+
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 111 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 161
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 162 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 214
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 215 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 257
Query: 294 GGDLELQNV-TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V +E + +I WC+ ++ +DRP+ ++
Sbjct: 258 GQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 291
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 124 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 174
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 175 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 227
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 228 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 270
Query: 294 GGDLELQNVT-EIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V+ E + +I WC+ ++ +DRP+ ++
Sbjct: 271 GQVFFRQRVSXECQHLIR--------WCLALRPSDRPTFEEI 304
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 169
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 170 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 222
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 223 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 265
Query: 294 GGDLELQNV-TEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V +E + +I WC+ ++ +DRP+ ++
Sbjct: 266 GQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 299
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 113/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIH--HVNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 122
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 123 VRHCHN---XGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 175
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 176 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 218
Query: 294 GGDLELQNVT-EIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V+ E + +I WC+ ++ +DRP+ ++
Sbjct: 219 GQVFFRQRVSXECQHLIR--------WCLALRPSDRPTFEEI 252
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 101/222 (45%), Gaps = 36/222 (16%)
Query: 69 FTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVN------ 121
KLG G F +V+ + + +A+K++ K E +E+ + R++ +
Sbjct: 23 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDS 82
Query: 122 -----VVQLLGFCSE----GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALG 172
+++LL + G +V+E + L + E RG L + K +++
Sbjct: 83 MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL-IKKYEHRGIPLIYVK--QISKQ 139
Query: 173 TARGIEYLHNGCDVCILHFDIKPHNILLD-----HNFIP-KVSDFGLAKFHPKENDFVSI 226
G++Y+H C I+H DIKP N+L++ N I K++D G A ++ + + +
Sbjct: 140 LLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--DEHYTNS 195
Query: 227 SATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEMAGG 267
TR Y +PE L+ +G C +D++ ++ E+ G
Sbjct: 196 IQTR---EYRSPEVLLGAPWG---CGADIWSTACLIFELITG 231
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 101/222 (45%), Gaps = 36/222 (16%)
Query: 69 FTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVN------ 121
KLG G F +V+ + + +A+K++ K E +E+ + R++ +
Sbjct: 23 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDS 82
Query: 122 -----VVQLLGFCSE----GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALG 172
+++LL + G +V+E + L + E RG L + K +++
Sbjct: 83 MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL-IKKYEHRGIPLIYVK--QISKQ 139
Query: 173 TARGIEYLHNGCDVCILHFDIKPHNILLD-----HNFIP-KVSDFGLAKFHPKENDFVSI 226
G++Y+H C I+H DIKP N+L++ N I K++D G A ++ + + +
Sbjct: 140 LLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--DEHYTNS 195
Query: 227 SATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEMAGG 267
TR Y +PE L+ +G C +D++ ++ E+ G
Sbjct: 196 IQTR---EYRSPEVLLGAPWG---CGADIWSTACLIFELITG 231
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 99 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 149
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 150 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 202
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 203 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 245
Query: 294 GGDLELQNVT-EIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V+ E + +I WC+ ++ +DRP+ ++
Sbjct: 246 GQVFFRQRVSXECQHLIR--------WCLALRPSDRPTFEEI 279
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 17/147 (11%)
Query: 121 NVVQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
N++ L + R ALV+E++ N K+ R Q+L + + ++
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDF------KQLR-QTLTDYDIRFYMYEILKALD 145
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
Y H+ + I+H D+KPHN+++DH ++ D+GLA+F+ ++ A+R G
Sbjct: 146 YCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEM 264
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 21/209 (10%)
Query: 73 LGQGGFGSVYKG-QLQTGGLIAVKMLENSKFSAEEFI-NEVSTIGRIH-HVNVVQLLGFC 129
LG+G V L T AVK++E + EV + + H NV++L+ F
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 130 SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189
E + LV+E M GS+ H+ + + + V A +++LHN I
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKRRHFNEL----EASVVVQDVASALDFLHNK---GIA 133
Query: 190 HFDIKPHNILLDH--NFIP-KVSDFGLAKFHPKENDFVSISATR-----GTIGYIAPELI 241
H D+KP NIL +H P K+ DF L D IS G+ Y+APE++
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 242 ---SRNFGTVSCKSDVYGFGMVLLEMAGG 267
S + D++ G++L + G
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 63/283 (22%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 155
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 156 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 208
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G + +D+
Sbjct: 209 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDI---------------PFEHDEEII 250
Query: 294 GGDLELQN--VTEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
GG + + +E + +I WC+ ++ +DRP+ ++
Sbjct: 251 GGQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 285
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 63/283 (22%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 155
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 156 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 208
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G + +D+
Sbjct: 209 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDI---------------PFEHDEEII 250
Query: 294 GGDLELQN--VTEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
GG + + +E + +I WC+ ++ +DRP+ ++
Sbjct: 251 GGQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 63/283 (22%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 154
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 155 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 207
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G + +D+
Sbjct: 208 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDI---------------PFEHDEEII 249
Query: 294 GGDLELQN--VTEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
GG + + +E + +I WC+ ++ +DRP+ ++
Sbjct: 250 GGQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 284
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 40/222 (18%)
Query: 73 LGQGGFGSVYKGQLQTGG--LIAVKMLENSKFSAEEFINEVSTIGRIHHVN------VVQ 124
LG+G FG V + G +AVK+++N E +E+ + ++ + VQ
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81
Query: 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184
+L + +V+E + + D F KE+ + + ++A + + +LH+
Sbjct: 82 MLEWFEHHGHICIVFELLGLSTYD---FIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK 138
Query: 185 DVCILHFDIKPHNILLDHN-----FIPKVS--------------DFGLAKFHPKENDFVS 225
+ H D+KP NIL + + PK+ DFG A + + +
Sbjct: 139 ---LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH---- 191
Query: 226 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267
S T Y APE+I + C DV+ G +L+E G
Sbjct: 192 -STLVSTRHYRAPEVILALGWSQPC--DVWSIGCILIEYYLG 230
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 111/281 (39%), Gaps = 59/281 (20%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 155
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 156 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 208
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G + +D+
Sbjct: 209 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDI---------------PFEHDEEII 250
Query: 294 GGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
GG + + E + WC+ ++ +DRP+ ++
Sbjct: 251 GGQVFFRQRVSXECQHLIR------WCLALRPSDRPTFEEI 285
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 121 NVVQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
N++ L + R ALV+E++ N + Q+L + + ++
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDF-------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
Y H+ + I+H D+KPHN+L+DH ++ D+GLA+F+ ++ A+R G
Sbjct: 146 YCHS---MGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEM 264
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 63/283 (22%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 154
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 155 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 207
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G + +D+
Sbjct: 208 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDI---------------PFEHDEEII 249
Query: 294 GGDLELQN--VTEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
GG + + +E + +I WC+ ++ +DRP+ ++
Sbjct: 250 GGQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 284
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 111/281 (39%), Gaps = 59/281 (20%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 155
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 156 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 208
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G + +D+
Sbjct: 209 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDI---------------PFEHDEEII 250
Query: 294 GGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
GG + + E + WC+ ++ +DRP+ ++
Sbjct: 251 GGQVFFRQRVSXECQHLIR------WCLALRPSDRPTFEEI 285
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 113/282 (40%), Gaps = 61/282 (21%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 142
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 143 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 195
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G P +++ +
Sbjct: 196 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IPFEHDEEIIR 238
Query: 294 GGDLELQNVT-EIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
G Q V+ E + +I WC+ ++ DRP+ ++
Sbjct: 239 GQVFFRQRVSXECQHLIR--------WCLALRPXDRPTFEEI 272
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 111/281 (39%), Gaps = 59/281 (20%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIHH--VNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 154
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 155 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 207
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G + +D+
Sbjct: 208 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDI---------------PFEHDEEII 249
Query: 294 GGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
GG + + E + WC+ ++ +DRP+ ++
Sbjct: 250 GGQVFFRQRVSXECQHLIR------WCLALRPSDRPTFEEI 284
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 63/283 (22%)
Query: 73 LGQGGFGSVYKGQLQTGGL-IAVKMLENSKFSAE-EFIN------EVSTIGRIH--HVNV 122
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFP------KESRGQSLCWEKLHEVALGTARG 176
++LL + L+ E P D F +E +S W+ L
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 122
Query: 177 IEYLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 235
+ + HN C V LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 123 VRHCHN-CGV--LHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 175
Query: 236 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293
PE I R G + V+ G++L +M G + +D+
Sbjct: 176 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDI---------------PFEHDEEII 217
Query: 294 GGDLELQN--VTEIESMIARKLCMIGLWCIQVKAADRPSMTKV 334
GG + + +E + +I WC+ ++ +DRP+ ++
Sbjct: 218 GGQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 252
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI---SRNF 245
+H DIKP N+LLD N +++DFG + ++ V S GT YI+PE++
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 271
Query: 246 GTVSCKSDVYGFGMVLLEMAGGR 268
G + D + G+ + EM G
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYGE 294
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 189 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI---SRNF 245
+H DIKP N+LLD N +++DFG + ++ V S GT YI+PE++
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 255
Query: 246 GTVSCKSDVYGFGMVLLEMAGGR 268
G + D + G+ + EM G
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 121 NVVQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
N++ L + R ALV+E++ N + Q+L + + ++
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDF-------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
Y H+ + I+H D+KPHN+++DH ++ D+GLA+F+ ++ A+R G
Sbjct: 146 YCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEM 264
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 121 NVVQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
N++ L + R ALV+E++ N + Q+L + + ++
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDF-------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
Y H+ + I+H D+KPHN+++DH ++ D+GLA+F+ ++ A+R G
Sbjct: 146 YCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEM 264
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 121 NVVQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
N++ L + R ALV+E++ N + Q+L + + ++
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDF-------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
Y H+ + I+H D+KPHN+++DH ++ D+GLA+F+ ++ A+R G
Sbjct: 146 YCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEM 264
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 121 NVVQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
N++ L + R ALV+E++ N + Q+L + + ++
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDF-------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
Y H+ + I+H D+KPHN+++DH ++ D+GLA+F+ ++ A+R G
Sbjct: 146 YCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEM 264
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 121 NVVQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
N++ L + R ALV+E++ N + Q+L + + ++
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDF-------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
Y H+ + I+H D+KPHN+++DH ++ D+GLA+F+ ++ A+R G
Sbjct: 146 YCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEM 264
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 121 NVVQLLGFCSEGSKR--ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIE 178
N++ L + R ALV+E++ N + Q+L + + ++
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDF-------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 179 YLHNGCDVCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIA 237
Y H+ + I+H D+KPHN+++DH ++ D+GLA+F+ ++ A+R G
Sbjct: 146 YCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 238 PELISRNFGTVSCKSDVYGFGMVLLEM 264
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,032,760
Number of Sequences: 62578
Number of extensions: 458776
Number of successful extensions: 3184
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 305
Number of HSP's that attempted gapping in prelim test: 1097
Number of HSP's gapped (non-prelim): 1138
length of query: 373
length of database: 14,973,337
effective HSP length: 100
effective length of query: 273
effective length of database: 8,715,537
effective search space: 2379341601
effective search space used: 2379341601
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)