Query 048542
Match_columns 373
No_of_seqs 276 out of 2537
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 10:27:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048542.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048542hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 1.6E-51 3.6E-56 379.0 25.7 284 53-343 61-354 (361)
2 KOG0575 Polo-like serine/threo 100.0 8.4E-52 1.8E-56 381.7 18.4 246 65-336 18-268 (592)
3 KOG0615 Serine/threonine prote 100.0 1.8E-52 3.9E-57 368.9 12.8 255 62-336 169-436 (475)
4 KOG0197 Tyrosine kinases [Sign 100.0 3.6E-51 7.7E-56 373.6 20.3 259 62-342 203-462 (468)
5 KOG0192 Tyrosine kinase specif 100.0 3.5E-50 7.6E-55 367.7 23.8 263 64-346 40-308 (362)
6 KOG0581 Mitogen-activated prot 100.0 2.4E-50 5.2E-55 352.7 18.6 250 66-336 80-334 (364)
7 KOG0591 NIMA (never in mitosis 100.0 3.3E-51 7.2E-56 344.4 9.3 263 64-343 18-287 (375)
8 KOG0595 Serine/threonine-prote 100.0 2.7E-49 5.8E-54 349.1 19.9 247 66-336 11-267 (429)
9 KOG0598 Ribosomal protein S6 k 100.0 3E-47 6.4E-52 333.2 14.4 241 64-329 24-269 (357)
10 KOG0593 Predicted protein kina 100.0 4.2E-47 9.1E-52 322.7 11.6 260 66-336 3-283 (396)
11 KOG0661 MAPK related serine/th 100.0 9.4E-47 2E-51 338.2 13.1 264 63-337 8-291 (538)
12 KOG0582 Ste20-like serine/thre 100.0 1.5E-45 3.2E-50 328.2 20.2 259 64-336 25-292 (516)
13 KOG0583 Serine/threonine prote 100.0 9.4E-46 2E-50 341.5 19.5 248 64-335 16-273 (370)
14 KOG0600 Cdc2-related protein k 100.0 4.9E-46 1.1E-50 335.9 16.9 264 64-336 116-399 (560)
15 KOG0198 MEKK and related serin 100.0 6.9E-46 1.5E-50 329.6 16.0 258 66-342 18-281 (313)
16 KOG0588 Serine/threonine prote 100.0 4.4E-46 9.5E-51 345.6 14.7 245 67-337 14-263 (786)
17 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.6E-45 5.6E-50 340.0 19.5 262 64-343 6-336 (338)
18 KOG0592 3-phosphoinositide-dep 100.0 8.1E-46 1.8E-50 337.1 15.4 247 66-336 74-337 (604)
19 KOG1026 Nerve growth factor re 100.0 6.1E-46 1.3E-50 355.3 14.6 262 64-344 485-765 (774)
20 KOG0659 Cdk activating kinase 100.0 4.4E-45 9.4E-50 305.3 16.3 262 66-337 3-281 (318)
21 KOG0193 Serine/threonine prote 100.0 2E-45 4.3E-50 338.4 15.0 264 61-343 388-655 (678)
22 KOG0578 p21-activated serine/t 100.0 6.5E-45 1.4E-49 333.6 17.2 246 67-336 275-522 (550)
23 KOG0616 cAMP-dependent protein 100.0 1.4E-44 2.9E-49 306.6 14.8 234 66-328 45-283 (355)
24 KOG0597 Serine-threonine prote 100.0 4.8E-45 1E-49 332.9 12.9 261 66-353 3-269 (808)
25 KOG0611 Predicted serine/threo 100.0 1.1E-44 2.5E-49 318.8 14.2 254 58-338 46-304 (668)
26 KOG0605 NDR and related serine 100.0 1.6E-44 3.4E-49 328.7 14.8 248 66-335 142-443 (550)
27 cd05096 PTKc_DDR1 Catalytic do 100.0 3E-43 6.6E-48 321.4 21.4 265 64-340 4-304 (304)
28 PHA02988 hypothetical protein; 100.0 4.4E-43 9.4E-48 316.9 21.3 246 71-341 26-279 (283)
29 cd05104 PTKc_Kit Catalytic dom 100.0 6.3E-43 1.4E-47 328.0 22.6 259 65-341 35-374 (375)
30 KOG0663 Protein kinase PITSLRE 100.0 4.6E-43 9.9E-48 301.8 19.3 272 65-352 76-374 (419)
31 KOG0196 Tyrosine kinase, EPH ( 100.0 9E-45 1.9E-49 341.8 8.8 255 67-343 631-893 (996)
32 KOG0201 Serine/threonine prote 100.0 9.3E-45 2E-49 322.8 8.4 245 67-336 15-262 (467)
33 KOG1095 Protein tyrosine kinas 100.0 1.6E-43 3.5E-48 350.1 17.6 267 60-345 687-965 (1025)
34 cd05631 STKc_GRK4 Catalytic do 100.0 3.3E-43 7.2E-48 318.1 17.5 249 67-336 2-260 (285)
35 cd05612 STKc_PRKX_like Catalyt 100.0 1.5E-43 3.3E-48 321.3 14.9 243 66-337 2-254 (291)
36 cd05106 PTKc_CSF-1R Catalytic 100.0 1.4E-42 3.1E-47 325.3 21.8 260 64-341 37-372 (374)
37 cd05064 PTKc_EphR_A10 Catalyti 100.0 8.6E-43 1.9E-47 312.3 19.4 256 63-341 3-265 (266)
38 KOG0585 Ca2+/calmodulin-depend 100.0 6.2E-43 1.4E-47 313.4 18.3 254 64-338 96-373 (576)
39 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.7E-42 8.1E-47 306.3 23.0 252 65-339 4-256 (256)
40 PTZ00263 protein kinase A cata 100.0 2.5E-43 5.3E-48 325.3 15.5 243 65-336 18-270 (329)
41 cd05571 STKc_PKB Catalytic dom 100.0 3.9E-43 8.6E-48 323.2 16.7 240 71-336 1-250 (323)
42 cd05068 PTKc_Frk_like Catalyti 100.0 2.1E-42 4.6E-47 308.8 20.9 255 64-340 5-260 (261)
43 cd05048 PTKc_Ror Catalytic Dom 100.0 2.7E-42 5.9E-47 311.8 21.6 257 65-340 5-282 (283)
44 KOG0033 Ca2+/calmodulin-depend 100.0 6.3E-45 1.4E-49 301.0 3.6 250 64-336 10-266 (355)
45 KOG2345 Serine/threonine prote 100.0 5.2E-44 1.1E-48 296.0 8.9 268 62-341 18-300 (302)
46 KOG4721 Serine/threonine prote 100.0 5.5E-44 1.2E-48 326.0 9.8 242 71-344 130-371 (904)
47 cd05072 PTKc_Lyn Catalytic dom 100.0 2.5E-42 5.4E-47 308.3 20.1 255 64-340 5-260 (261)
48 cd05049 PTKc_Trk Catalytic dom 100.0 3E-42 6.4E-47 310.9 20.7 258 64-340 4-280 (280)
49 KOG0194 Protein tyrosine kinas 100.0 2.6E-43 5.7E-48 326.8 14.0 294 28-346 111-425 (474)
50 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 8.9E-43 1.9E-47 322.3 17.3 250 66-337 2-257 (333)
51 cd06649 PKc_MEK2 Catalytic dom 100.0 2.6E-42 5.7E-47 318.8 20.0 256 65-337 5-301 (331)
52 KOG0694 Serine/threonine prote 100.0 1.6E-42 3.5E-47 323.9 18.4 239 66-331 369-613 (694)
53 PTZ00267 NIMA-related protein 100.0 2.6E-42 5.5E-47 333.3 20.2 252 66-336 68-322 (478)
54 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.7E-42 8E-47 324.1 20.8 261 65-343 37-399 (400)
55 KOG0660 Mitogen-activated prot 100.0 4.9E-43 1.1E-47 305.6 13.7 259 69-336 26-309 (359)
56 cd05585 STKc_YPK1_like Catalyt 100.0 1.3E-42 2.8E-47 318.3 17.1 239 73-337 1-244 (312)
57 KOG0589 Serine/threonine prote 100.0 3E-43 6.5E-48 320.6 12.7 250 65-337 4-258 (426)
58 KOG0599 Phosphorylase kinase g 100.0 2.5E-43 5.4E-48 295.8 11.2 250 66-336 18-282 (411)
59 PTZ00426 cAMP-dependent protei 100.0 1.2E-42 2.6E-47 321.7 16.8 246 63-337 28-284 (340)
60 PF07714 Pkinase_Tyr: Protein 100.0 1.9E-42 4.1E-47 308.8 17.4 249 69-338 3-259 (259)
61 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1E-41 2.2E-46 303.6 22.1 252 65-339 4-256 (256)
62 cd05052 PTKc_Abl Catalytic dom 100.0 5.3E-42 1.2E-46 306.6 20.3 255 65-341 6-262 (263)
63 cd05059 PTKc_Tec_like Catalyti 100.0 8.4E-42 1.8E-46 304.1 21.3 251 65-338 4-255 (256)
64 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.1E-42 8.9E-47 311.5 19.1 261 66-336 6-284 (288)
65 KOG0580 Serine/threonine prote 100.0 2.8E-43 6.1E-48 290.3 10.3 245 66-336 23-272 (281)
66 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.7E-42 3.7E-47 316.2 16.5 259 65-336 5-287 (303)
67 cd05033 PTKc_EphR Catalytic do 100.0 1.1E-41 2.4E-46 305.1 21.3 255 65-341 4-265 (266)
68 cd05595 STKc_PKB_beta Catalyti 100.0 2.4E-42 5.2E-47 317.9 17.5 240 71-336 1-250 (323)
69 cd07848 STKc_CDKL5 Catalytic d 100.0 2.2E-42 4.7E-47 313.1 16.9 261 66-336 2-283 (287)
70 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.7E-42 5.8E-47 319.8 17.6 262 67-336 2-289 (338)
71 cd05108 PTKc_EGFR Catalytic do 100.0 9.7E-42 2.1E-46 313.1 21.0 257 64-343 6-270 (316)
72 cd06650 PKc_MEK1 Catalytic dom 100.0 1.2E-41 2.6E-46 314.5 21.6 257 63-336 3-298 (333)
73 PHA03212 serine/threonine kina 100.0 2.2E-41 4.7E-46 318.6 23.7 256 65-336 92-375 (391)
74 PTZ00283 serine/threonine prot 100.0 5E-42 1.1E-46 331.7 19.8 255 64-337 31-297 (496)
75 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.4E-41 5.1E-46 301.9 22.6 253 65-340 6-260 (261)
76 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.7E-41 5.8E-46 301.5 22.8 256 62-340 3-259 (260)
77 cd05593 STKc_PKB_gamma Catalyt 100.0 3.7E-42 8.1E-47 317.3 17.7 241 71-337 1-251 (328)
78 cd05608 STKc_GRK1 Catalytic do 100.0 5E-42 1.1E-46 309.6 18.1 246 73-336 1-256 (280)
79 KOG0594 Protein kinase PCTAIRE 100.0 9.5E-42 2.1E-46 298.3 19.0 262 65-337 11-302 (323)
80 cd05093 PTKc_TrkB Catalytic do 100.0 9E-42 2E-46 309.2 19.2 261 64-343 4-281 (288)
81 PLN00034 mitogen-activated pro 100.0 1.1E-41 2.4E-46 317.4 20.3 248 65-336 74-327 (353)
82 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.6E-41 5.5E-46 301.6 21.6 254 64-340 5-259 (260)
83 cd05054 PTKc_VEGFR Catalytic d 100.0 1.1E-41 2.5E-46 315.0 19.9 261 65-343 7-335 (337)
84 cd08228 STKc_Nek6 Catalytic do 100.0 2.4E-41 5.2E-46 302.9 21.2 258 66-341 3-265 (267)
85 cd05091 PTKc_Ror2 Catalytic do 100.0 1.7E-41 3.7E-46 306.5 20.5 258 64-340 4-282 (283)
86 cd05071 PTKc_Src Catalytic dom 100.0 2.9E-41 6.2E-46 301.7 21.1 255 64-341 5-260 (262)
87 cd05062 PTKc_IGF-1R Catalytic 100.0 3E-41 6.5E-46 304.1 21.3 259 63-340 4-277 (277)
88 cd05094 PTKc_TrkC Catalytic do 100.0 2.2E-41 4.7E-46 307.2 20.3 260 65-343 5-284 (291)
89 cd05588 STKc_aPKC Catalytic do 100.0 1.2E-41 2.5E-46 314.2 18.7 248 71-336 1-261 (329)
90 cd05084 PTKc_Fes Catalytic dom 100.0 3.4E-41 7.3E-46 299.4 20.5 247 71-339 1-251 (252)
91 cd05618 STKc_aPKC_iota Catalyt 100.0 1.6E-41 3.5E-46 313.1 19.0 243 71-331 1-250 (329)
92 cd05090 PTKc_Ror1 Catalytic do 100.0 6.6E-41 1.4E-45 302.8 22.3 257 65-340 5-282 (283)
93 KOG4717 Serine/threonine prote 100.0 7.4E-42 1.6E-46 309.0 15.7 247 65-336 18-269 (864)
94 cd05594 STKc_PKB_alpha Catalyt 100.0 4.9E-42 1.1E-46 316.3 15.0 240 71-336 1-251 (325)
95 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.8E-42 1E-46 319.6 15.0 250 66-337 2-285 (350)
96 cd05590 STKc_nPKC_eta Catalyti 100.0 1.2E-41 2.6E-46 312.9 17.4 235 71-331 1-241 (320)
97 cd05589 STKc_PKN Catalytic dom 100.0 2.9E-41 6.2E-46 311.0 19.9 243 67-336 1-256 (324)
98 cd05584 STKc_p70S6K Catalytic 100.0 1.3E-41 2.9E-46 313.1 17.5 240 71-336 2-255 (323)
99 KOG1989 ARK protein kinase fam 100.0 6.9E-42 1.5E-46 328.8 16.1 258 66-343 38-313 (738)
100 KOG0032 Ca2+/calmodulin-depend 100.0 3.7E-41 7.9E-46 310.9 20.2 252 61-336 31-292 (382)
101 cd05075 PTKc_Axl Catalytic dom 100.0 5.9E-41 1.3E-45 301.2 21.1 254 69-341 3-271 (272)
102 cd05034 PTKc_Src_like Catalyti 100.0 7.6E-41 1.7E-45 298.6 21.7 255 64-340 5-260 (261)
103 cd05032 PTKc_InsR_like Catalyt 100.0 5E-41 1.1E-45 302.5 20.7 259 63-340 4-277 (277)
104 cd05111 PTK_HER3 Pseudokinase 100.0 8.3E-41 1.8E-45 301.5 22.0 255 66-343 8-270 (279)
105 cd05614 STKc_MSK2_N N-terminal 100.0 9.6E-42 2.1E-46 315.3 16.2 250 67-336 2-266 (332)
106 PTZ00266 NIMA-related protein 100.0 8.9E-41 1.9E-45 334.0 24.2 270 54-340 2-300 (1021)
107 cd05053 PTKc_FGFR Catalytic do 100.0 4.9E-41 1.1E-45 305.1 20.5 260 64-342 11-292 (293)
108 KOG0658 Glycogen synthase kina 100.0 1.1E-42 2.4E-47 303.9 9.2 258 68-336 27-305 (364)
109 cd05592 STKc_nPKC_theta_delta 100.0 2.1E-41 4.6E-46 310.7 18.2 239 71-335 1-246 (316)
110 cd05605 STKc_GRK4_like Catalyt 100.0 1.5E-41 3.2E-46 307.4 16.8 250 66-336 1-260 (285)
111 cd05035 PTKc_Axl_like Catalyti 100.0 8.6E-41 1.9E-45 300.1 21.5 256 67-341 1-272 (273)
112 cd05045 PTKc_RET Catalytic dom 100.0 4.6E-41 1E-45 304.9 19.9 258 67-343 2-288 (290)
113 cd05626 STKc_LATS2 Catalytic d 100.0 2.5E-41 5.5E-46 318.1 18.8 251 67-337 3-305 (381)
114 cd05591 STKc_nPKC_epsilon Cata 100.0 1.7E-41 3.7E-46 312.1 17.2 241 71-337 1-254 (321)
115 cd08229 STKc_Nek7 Catalytic do 100.0 7.2E-41 1.6E-45 299.8 20.7 258 66-341 3-265 (267)
116 cd05620 STKc_nPKC_delta Cataly 100.0 2E-41 4.4E-46 310.8 17.6 239 71-335 1-246 (316)
117 cd05599 STKc_NDR_like Catalyti 100.0 1.4E-41 2.9E-46 318.3 16.6 250 66-336 2-295 (364)
118 cd05043 PTK_Ryk Pseudokinase d 100.0 5.1E-41 1.1E-45 303.0 19.7 262 63-343 4-278 (280)
119 cd00192 PTKc Catalytic domain 100.0 1.5E-40 3.4E-45 296.2 22.6 250 71-339 1-262 (262)
120 cd05116 PTKc_Syk Catalytic dom 100.0 9.8E-41 2.1E-45 297.4 21.2 246 72-341 2-255 (257)
121 cd05069 PTKc_Yes Catalytic dom 100.0 1.2E-40 2.5E-45 297.4 21.7 253 65-340 6-259 (260)
122 cd07862 STKc_CDK6 Catalytic do 100.0 3.5E-41 7.6E-46 305.6 18.5 256 66-336 2-286 (290)
123 cd05619 STKc_nPKC_theta Cataly 100.0 3.4E-41 7.3E-46 309.3 18.4 239 71-335 1-246 (316)
124 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.4E-41 9.6E-46 307.5 19.1 263 62-343 15-301 (307)
125 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.8E-40 3.8E-45 297.1 22.6 259 66-342 3-266 (267)
126 cd05601 STKc_CRIK Catalytic do 100.0 3E-41 6.5E-46 311.8 17.9 252 66-336 2-262 (330)
127 cd05596 STKc_ROCK Catalytic do 100.0 5.4E-41 1.2E-45 314.3 19.9 254 63-337 41-304 (370)
128 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.8E-41 1E-45 303.7 18.8 259 68-342 7-282 (283)
129 cd05097 PTKc_DDR_like Catalyti 100.0 6.4E-41 1.4E-45 304.7 19.2 264 64-339 4-294 (295)
130 cd05587 STKc_cPKC Catalytic do 100.0 4E-41 8.6E-46 310.1 17.9 239 67-331 2-246 (324)
131 cd05628 STKc_NDR1 Catalytic do 100.0 7.6E-41 1.6E-45 312.9 20.0 251 66-337 2-293 (363)
132 cd05570 STKc_PKC Catalytic dom 100.0 3.2E-41 6.9E-46 309.9 17.2 240 71-336 1-251 (318)
133 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.4E-40 3.1E-45 313.2 21.9 263 62-342 34-400 (401)
134 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.1E-40 4.6E-45 306.6 22.5 261 64-343 11-295 (334)
135 cd05109 PTKc_HER2 Catalytic do 100.0 1.4E-40 3.1E-45 300.0 20.8 257 64-343 6-270 (279)
136 cd05622 STKc_ROCK1 Catalytic d 100.0 6.9E-41 1.5E-45 313.6 19.4 255 62-337 40-304 (371)
137 cd05092 PTKc_TrkA Catalytic do 100.0 8.9E-41 1.9E-45 301.5 19.4 257 65-340 5-280 (280)
138 cd05629 STKc_NDR_like_fungal C 100.0 4.4E-41 9.4E-46 316.2 17.8 250 66-337 2-305 (377)
139 PF00069 Pkinase: Protein kina 100.0 2.2E-41 4.7E-46 301.7 15.0 251 67-336 1-256 (260)
140 cd05621 STKc_ROCK2 Catalytic d 100.0 9.6E-41 2.1E-45 312.4 19.8 254 64-337 42-304 (370)
141 PTZ00036 glycogen synthase kin 100.0 2.4E-41 5.3E-46 323.0 16.1 261 65-336 66-350 (440)
142 cd05051 PTKc_DDR Catalytic dom 100.0 2.2E-40 4.8E-45 301.2 21.6 263 65-340 5-296 (296)
143 cd05101 PTKc_FGFR2 Catalytic d 100.0 1E-40 2.3E-45 304.6 19.4 262 62-342 12-297 (304)
144 cd05582 STKc_RSK_N N-terminal 100.0 8.7E-42 1.9E-46 313.7 12.3 237 71-333 2-245 (318)
145 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.4E-40 5.3E-45 303.6 21.7 260 65-343 12-295 (314)
146 cd05604 STKc_SGK3 Catalytic do 100.0 1.1E-40 2.3E-45 307.4 19.4 239 71-335 1-245 (325)
147 cd05061 PTKc_InsR Catalytic do 100.0 2.7E-40 5.9E-45 299.5 21.7 261 63-342 4-279 (288)
148 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.3E-40 5E-45 297.0 21.0 256 71-339 1-268 (269)
149 cd05073 PTKc_Hck Catalytic dom 100.0 1.6E-40 3.4E-45 296.6 19.8 255 63-340 4-259 (260)
150 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.2E-40 2.7E-45 304.8 19.4 261 66-336 7-285 (309)
151 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.9E-40 4.1E-45 298.9 20.3 257 64-339 5-276 (277)
152 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.2E-40 2.6E-45 307.2 19.3 242 71-331 1-248 (327)
153 cd06646 STKc_MAP4K5 Catalytic 100.0 1.5E-40 3.2E-45 297.8 19.4 255 65-338 9-266 (267)
154 cd05607 STKc_GRK7 Catalytic do 100.0 1.4E-40 3E-45 299.8 19.2 247 73-339 1-252 (277)
155 cd05055 PTKc_PDGFR Catalytic d 100.0 3.9E-40 8.5E-45 300.5 22.4 259 63-341 33-301 (302)
156 cd05598 STKc_LATS Catalytic do 100.0 2.9E-41 6.2E-46 317.4 15.2 251 66-337 2-301 (376)
157 KOG4278 Protein tyrosine kinas 100.0 1.4E-41 3.1E-46 313.1 12.7 252 69-342 271-524 (1157)
158 cd05575 STKc_SGK Catalytic dom 100.0 1.6E-40 3.4E-45 306.0 19.8 236 71-332 1-242 (323)
159 PHA03211 serine/threonine kina 100.0 2.7E-40 5.8E-45 315.1 22.0 258 65-336 169-454 (461)
160 PHA03207 serine/threonine kina 100.0 1.9E-40 4.2E-45 313.1 20.5 262 61-337 88-375 (392)
161 cd05112 PTKc_Itk Catalytic dom 100.0 5.6E-40 1.2E-44 292.2 22.1 251 65-338 4-255 (256)
162 cd05115 PTKc_Zap-70 Catalytic 100.0 8.8E-40 1.9E-44 291.3 23.3 247 72-341 2-255 (257)
163 cd05625 STKc_LATS1 Catalytic d 100.0 4.9E-41 1.1E-45 316.4 16.0 249 67-336 3-304 (382)
164 cd05039 PTKc_Csk_like Catalyti 100.0 2.9E-40 6.2E-45 294.1 20.0 249 65-340 6-255 (256)
165 cd05616 STKc_cPKC_beta Catalyt 100.0 8.9E-41 1.9E-45 307.6 17.3 239 67-331 2-246 (323)
166 cd05050 PTKc_Musk Catalytic do 100.0 1.8E-40 3.8E-45 300.7 19.0 257 65-340 5-288 (288)
167 cd08529 STKc_FA2-like Catalyti 100.0 6.2E-40 1.3E-44 291.8 22.1 248 67-337 2-253 (256)
168 cd05060 PTKc_Syk_like Catalyti 100.0 4.8E-40 1E-44 292.9 21.4 247 71-341 1-255 (257)
169 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.3E-40 7.1E-45 306.3 21.1 262 64-343 6-341 (343)
170 cd05042 PTKc_Aatyk Catalytic d 100.0 3.3E-40 7.2E-45 295.9 20.4 256 71-339 1-268 (269)
171 cd05095 PTKc_DDR2 Catalytic do 100.0 4.2E-40 9.2E-45 299.5 21.4 262 65-339 5-295 (296)
172 cd05065 PTKc_EphR_B Catalytic 100.0 2.1E-40 4.6E-45 297.2 18.9 255 65-341 4-268 (269)
173 cd05088 PTKc_Tie2 Catalytic do 100.0 1.2E-40 2.5E-45 304.1 17.4 260 62-343 4-282 (303)
174 cd08219 STKc_Nek3 Catalytic do 100.0 2.8E-40 6.1E-45 294.0 19.1 248 67-337 2-252 (255)
175 cd05066 PTKc_EphR_A Catalytic 100.0 4E-40 8.6E-45 295.2 20.2 255 65-341 4-266 (267)
176 cd05085 PTKc_Fer Catalytic dom 100.0 6.9E-40 1.5E-44 290.5 21.5 246 71-339 1-249 (250)
177 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7.4E-40 1.6E-44 296.1 22.1 263 65-341 4-283 (284)
178 cd05602 STKc_SGK1 Catalytic do 100.0 1.6E-40 3.5E-45 306.1 18.0 241 71-337 1-247 (325)
179 cd07868 STKc_CDK8 Catalytic do 100.0 6.7E-40 1.5E-44 301.1 22.0 261 70-336 6-313 (317)
180 cd05063 PTKc_EphR_A2 Catalytic 100.0 5.6E-40 1.2E-44 294.3 20.9 255 65-341 5-267 (268)
181 cd05089 PTKc_Tie1 Catalytic do 100.0 2.3E-40 5.1E-45 301.3 18.7 258 66-345 3-279 (297)
182 cd06619 PKc_MKK5 Catalytic dom 100.0 1.1E-39 2.4E-44 294.2 22.8 248 67-337 3-253 (279)
183 cd07853 STKc_NLK Catalytic dom 100.0 1.4E-40 2.9E-45 312.3 17.4 260 67-336 2-287 (372)
184 cd05603 STKc_SGK2 Catalytic do 100.0 4.2E-40 9.1E-45 302.9 20.2 236 71-332 1-242 (321)
185 KOG1094 Discoidin domain recep 100.0 3.7E-41 8E-46 308.4 12.9 265 62-341 535-804 (807)
186 cd07876 STKc_JNK2 Catalytic do 100.0 6.9E-40 1.5E-44 306.1 21.9 258 64-336 20-314 (359)
187 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 5.9E-40 1.3E-44 296.7 20.4 262 63-338 3-267 (284)
188 KOG0610 Putative serine/threon 100.0 7.3E-40 1.6E-44 289.6 20.3 266 60-345 72-402 (459)
189 cd06625 STKc_MEKK3_like Cataly 100.0 7.1E-40 1.5E-44 292.6 20.6 250 66-337 3-260 (263)
190 cd05057 PTKc_EGFR_like Catalyt 100.0 1E-39 2.2E-44 294.4 21.6 257 64-343 6-270 (279)
191 cd05082 PTKc_Csk Catalytic dom 100.0 7.9E-40 1.7E-44 291.3 20.5 248 65-340 6-255 (256)
192 cd06645 STKc_MAP4K3 Catalytic 100.0 9.8E-40 2.1E-44 292.5 21.1 253 65-336 9-264 (267)
193 cd05047 PTKc_Tie Catalytic dom 100.0 9.2E-40 2E-44 293.3 20.8 250 71-342 1-269 (270)
194 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.1E-39 2.5E-44 292.4 21.3 256 71-339 1-267 (268)
195 cd05615 STKc_cPKC_alpha Cataly 100.0 2.4E-40 5.1E-45 304.7 17.3 239 67-331 2-246 (323)
196 cd08227 PK_STRAD_alpha Pseudok 100.0 1.3E-39 2.8E-44 300.5 22.2 263 69-336 2-306 (327)
197 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.3E-39 2.9E-44 294.4 21.9 262 66-341 5-283 (284)
198 cd06612 STKc_MST1_2 Catalytic 100.0 9.3E-40 2E-44 290.6 20.3 248 66-336 4-252 (256)
199 cd05630 STKc_GRK6 Catalytic do 100.0 3.2E-40 7E-45 298.6 17.5 249 67-336 2-260 (285)
200 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.8E-39 3.9E-44 290.1 22.0 240 71-339 1-262 (262)
201 PRK13184 pknD serine/threonine 100.0 3.7E-40 8E-45 328.2 19.3 261 66-343 3-292 (932)
202 cd06654 STKc_PAK1 Catalytic do 100.0 1.2E-39 2.6E-44 296.5 21.0 247 66-336 21-269 (296)
203 cd05044 PTKc_c-ros Catalytic d 100.0 6.4E-40 1.4E-44 294.0 19.0 251 71-340 1-269 (269)
204 cd05041 PTKc_Fes_like Catalyti 100.0 2E-39 4.4E-44 287.7 21.9 247 71-339 1-250 (251)
205 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4.6E-40 9.9E-45 305.5 18.4 257 65-336 15-297 (343)
206 cd06637 STKc_TNIK Catalytic do 100.0 1.5E-39 3.2E-44 292.1 21.1 252 65-336 6-268 (272)
207 cd07874 STKc_JNK3 Catalytic do 100.0 4.9E-40 1.1E-44 306.7 18.5 258 65-337 17-311 (355)
208 cd05040 PTKc_Ack_like Catalyti 100.0 1.1E-39 2.5E-44 290.4 20.0 247 71-339 1-256 (257)
209 cd06615 PKc_MEK Catalytic doma 100.0 7.5E-40 1.6E-44 299.5 19.1 254 67-337 3-287 (308)
210 cd07861 STKc_CDK1_euk Catalyti 100.0 7.7E-40 1.7E-44 295.9 19.0 262 67-336 2-281 (285)
211 KOG4257 Focal adhesion tyrosin 100.0 1.7E-40 3.7E-45 306.1 14.8 251 68-342 392-650 (974)
212 cd07863 STKc_CDK4 Catalytic do 100.0 5.4E-40 1.2E-44 297.5 17.7 255 67-336 2-284 (288)
213 cd06638 STKc_myosinIIIA Cataly 100.0 1E-39 2.2E-44 295.4 19.3 256 65-337 18-283 (286)
214 cd05627 STKc_NDR2 Catalytic do 100.0 4.7E-40 1E-44 307.3 17.3 248 67-336 3-292 (360)
215 cd05632 STKc_GRK5 Catalytic do 100.0 7.9E-40 1.7E-44 296.1 18.1 249 67-336 2-260 (285)
216 cd06644 STKc_STK10_LOK Catalyt 100.0 4.7E-39 1E-43 292.0 23.2 252 65-336 12-268 (292)
217 cd05597 STKc_DMPK_like Catalyt 100.0 1.1E-39 2.4E-44 301.2 19.3 255 66-337 2-266 (331)
218 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.9E-40 1.3E-44 295.2 16.9 239 72-339 2-274 (274)
219 cd05586 STKc_Sck1_like Catalyt 100.0 2.4E-40 5.1E-45 305.8 14.5 240 73-336 1-252 (330)
220 KOG0596 Dual specificity; seri 100.0 2.6E-40 5.7E-45 301.4 14.3 252 62-336 358-626 (677)
221 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.8E-39 8.2E-44 291.9 21.8 258 67-336 3-265 (287)
222 cd07873 STKc_PCTAIRE1 Catalyti 100.0 7.8E-40 1.7E-44 298.5 17.4 261 66-336 7-285 (301)
223 cd07875 STKc_JNK1 Catalytic do 100.0 2E-39 4.4E-44 303.5 20.6 259 64-337 23-318 (364)
224 cd05056 PTKc_FAK Catalytic dom 100.0 1.8E-39 4E-44 291.3 19.4 256 64-343 5-267 (270)
225 cd08221 STKc_Nek9 Catalytic do 100.0 3.5E-39 7.5E-44 287.1 21.0 248 67-337 2-253 (256)
226 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.6E-39 5.6E-44 290.6 20.3 254 67-336 3-268 (272)
227 cd06631 STKc_YSK4 Catalytic do 100.0 1.5E-39 3.3E-44 291.0 18.6 249 67-336 2-261 (265)
228 cd06643 STKc_SLK Catalytic dom 100.0 3.3E-39 7.1E-44 291.5 20.9 250 67-336 7-261 (282)
229 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4E-39 8.6E-44 287.1 21.1 240 71-339 1-259 (259)
230 cd05058 PTKc_Met_Ron Catalytic 100.0 2.9E-39 6.3E-44 288.6 20.3 250 71-342 1-260 (262)
231 cd06611 STKc_SLK_like Catalyti 100.0 3.6E-39 7.7E-44 291.0 21.0 252 65-336 5-261 (280)
232 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.3E-39 9.3E-44 290.8 21.6 263 65-341 4-283 (284)
233 PHA03209 serine/threonine kina 100.0 1.4E-39 3.1E-44 303.5 18.9 256 64-336 65-350 (357)
234 cd06608 STKc_myosinIII_like Ca 100.0 2.2E-39 4.8E-44 291.1 19.2 255 65-336 6-271 (275)
235 cd06609 STKc_MST3_like Catalyt 100.0 5E-39 1.1E-43 289.1 21.6 246 66-336 2-250 (274)
236 cd05624 STKc_MRCK_beta Catalyt 100.0 1.1E-39 2.4E-44 301.2 17.7 254 66-336 2-265 (331)
237 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.9E-39 8.5E-44 290.3 20.7 246 65-336 4-252 (277)
238 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.3E-39 4.9E-44 293.0 19.2 261 66-336 2-282 (286)
239 cd06613 STKc_MAP4K3_like Catal 100.0 5.6E-39 1.2E-43 286.6 21.5 253 66-336 4-259 (262)
240 cd08223 STKc_Nek4 Catalytic do 100.0 5.4E-39 1.2E-43 286.0 21.1 247 67-336 2-253 (257)
241 cd05110 PTKc_HER4 Catalytic do 100.0 3.5E-39 7.7E-44 294.4 20.4 256 65-343 7-270 (303)
242 cd06655 STKc_PAK2 Catalytic do 100.0 4E-39 8.6E-44 293.0 20.6 247 66-336 20-268 (296)
243 smart00219 TyrKc Tyrosine kina 100.0 5E-39 1.1E-43 286.0 20.8 249 68-338 2-258 (258)
244 cd08528 STKc_Nek10 Catalytic d 100.0 4.3E-39 9.2E-44 288.7 20.3 252 67-339 2-268 (269)
245 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4E-40 8.6E-45 293.7 13.5 240 71-339 1-258 (258)
246 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.8E-39 8.3E-44 288.6 19.8 247 67-336 2-263 (267)
247 cd06640 STKc_MST4 Catalytic do 100.0 1.4E-38 3E-43 286.7 23.6 246 66-337 5-253 (277)
248 cd07867 STKc_CDC2L6 Catalytic 100.0 7.9E-39 1.7E-43 293.9 22.2 260 71-336 7-313 (317)
249 KOG0577 Serine/threonine prote 100.0 1.7E-40 3.8E-45 304.4 11.1 240 71-336 32-277 (948)
250 cd08217 STKc_Nek2 Catalytic do 100.0 4.9E-39 1.1E-43 287.1 20.0 249 67-336 2-261 (265)
251 KOG4279 Serine/threonine prote 100.0 2.3E-40 5.1E-45 308.4 11.8 245 72-336 582-831 (1226)
252 cd07839 STKc_CDK5 Catalytic do 100.0 1.7E-39 3.7E-44 293.6 16.9 260 67-336 2-280 (284)
253 cd06656 STKc_PAK3 Catalytic do 100.0 4.5E-39 9.8E-44 292.8 19.6 248 65-336 19-268 (297)
254 cd07846 STKc_CDKL2_3 Catalytic 100.0 1E-39 2.2E-44 295.3 15.2 261 66-336 2-282 (286)
255 cd07841 STKc_CDK7 Catalytic do 100.0 3.1E-39 6.7E-44 294.0 18.4 260 67-336 2-281 (298)
256 KOG0667 Dual-specificity tyros 100.0 1.4E-39 3E-44 303.9 16.3 201 62-275 183-392 (586)
257 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.6E-39 1.4E-43 288.0 20.2 256 67-341 1-272 (273)
258 PTZ00284 protein kinase; Provi 100.0 3.4E-39 7.4E-44 311.3 19.6 257 65-336 129-437 (467)
259 cd05623 STKc_MRCK_alpha Cataly 100.0 2.6E-39 5.5E-44 299.0 17.7 255 66-337 2-266 (332)
260 cd05083 PTKc_Chk Catalytic dom 100.0 7.6E-39 1.6E-43 284.7 19.7 247 65-340 6-253 (254)
261 cd06639 STKc_myosinIIIB Cataly 100.0 1.2E-38 2.6E-43 289.2 21.4 254 66-336 23-286 (291)
262 cd06624 STKc_ASK Catalytic dom 100.0 8.9E-39 1.9E-43 286.5 20.2 246 71-336 14-264 (268)
263 KOG0199 ACK and related non-re 100.0 1.2E-39 2.6E-44 303.9 14.4 249 66-336 111-367 (1039)
264 cd06605 PKc_MAPKK Catalytic do 100.0 5.8E-39 1.3E-43 287.1 18.3 250 67-336 3-256 (265)
265 cd08218 STKc_Nek1 Catalytic do 100.0 9.2E-39 2E-43 284.4 19.5 247 67-336 2-252 (256)
266 KOG0574 STE20-like serine/thre 100.0 3.1E-41 6.8E-46 286.8 3.4 248 66-336 34-282 (502)
267 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.9E-38 4.2E-43 283.8 21.4 257 66-336 2-263 (267)
268 cd05046 PTK_CCK4 Pseudokinase 100.0 1.8E-38 3.8E-43 285.6 21.2 256 65-339 5-274 (275)
269 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.3E-38 2.9E-43 288.1 20.5 253 66-336 2-261 (286)
270 cd07832 STKc_CCRK Catalytic do 100.0 9E-39 2E-43 289.0 19.2 257 67-336 2-281 (286)
271 cd06636 STKc_MAP4K4_6 Catalyti 100.0 6.8E-39 1.5E-43 289.4 18.1 252 65-336 16-278 (282)
272 cd06632 STKc_MEKK1_plant Catal 100.0 1.3E-38 2.9E-43 283.4 19.3 246 67-336 2-254 (258)
273 cd06658 STKc_PAK5 Catalytic do 100.0 1.3E-38 2.9E-43 289.0 19.6 244 70-337 27-272 (292)
274 cd06917 STKc_NAK1_like Catalyt 100.0 2.7E-38 5.8E-43 284.8 21.1 246 67-336 3-254 (277)
275 cd07844 STKc_PCTAIRE_like Cata 100.0 6.9E-39 1.5E-43 290.7 17.4 261 66-336 6-287 (291)
276 cd07849 STKc_ERK1_2_like Catal 100.0 8E-39 1.7E-43 296.3 18.1 274 65-348 5-305 (336)
277 cd08220 STKc_Nek8 Catalytic do 100.0 2.6E-38 5.5E-43 281.3 20.5 246 67-336 2-252 (256)
278 cd06651 STKc_MEKK3 Catalytic d 100.0 1.2E-38 2.5E-43 285.5 18.3 247 67-336 4-260 (266)
279 cd05580 STKc_PKA Catalytic dom 100.0 1.6E-38 3.5E-43 288.2 19.5 242 66-336 2-253 (290)
280 PLN00113 leucine-rich repeat r 100.0 3.5E-38 7.5E-43 329.9 24.4 265 57-343 683-953 (968)
281 cd05578 STKc_Yank1 Catalytic d 100.0 4.6E-39 1E-43 286.7 15.3 245 67-335 2-253 (258)
282 cd07860 STKc_CDK2_3 Catalytic 100.0 1.5E-38 3.2E-43 287.5 18.1 261 67-336 2-280 (284)
283 cd06641 STKc_MST3 Catalytic do 100.0 7.5E-38 1.6E-42 281.9 22.6 246 66-337 5-253 (277)
284 cd07842 STKc_CDK8_like Catalyt 100.0 1.4E-38 3E-43 292.0 18.1 265 67-336 2-312 (316)
285 cd05609 STKc_MAST Catalytic do 100.0 2.3E-38 4.9E-43 289.3 19.4 253 67-340 3-273 (305)
286 cd06626 STKc_MEKK4 Catalytic d 100.0 4.9E-38 1.1E-42 280.8 21.1 252 67-336 2-260 (264)
287 cd06659 STKc_PAK6 Catalytic do 100.0 2.8E-38 6.1E-43 287.6 19.9 244 70-337 26-271 (297)
288 cd06607 STKc_TAO Catalytic dom 100.0 8E-38 1.7E-42 286.0 23.0 247 65-337 15-267 (307)
289 cd06630 STKc_MEKK1 Catalytic d 100.0 3.8E-38 8.3E-43 282.2 20.3 251 67-336 2-263 (268)
290 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.6E-38 7.8E-43 284.7 20.1 252 67-336 3-260 (283)
291 KOG0604 MAP kinase-activated p 100.0 3.7E-39 8E-44 273.9 12.5 250 66-336 62-321 (400)
292 cd06623 PKc_MAPKK_plant_like C 100.0 7.3E-38 1.6E-42 279.6 21.5 248 67-336 3-255 (264)
293 KOG3653 Transforming growth fa 100.0 3.2E-39 7E-44 289.6 12.5 267 67-343 212-505 (534)
294 cd05574 STKc_phototropin_like 100.0 5E-38 1.1E-42 288.5 20.8 251 66-336 2-288 (316)
295 KOG0586 Serine/threonine prote 100.0 6.1E-39 1.3E-43 296.8 14.4 245 66-336 57-305 (596)
296 cd07843 STKc_CDC2L1 Catalytic 100.0 4.8E-38 1E-42 285.5 19.9 261 66-336 6-289 (293)
297 cd06652 STKc_MEKK2 Catalytic d 100.0 7.6E-38 1.6E-42 280.0 20.7 248 66-336 3-260 (265)
298 KOG0983 Mitogen-activated prot 100.0 7.1E-39 1.5E-43 269.1 13.0 249 68-336 95-348 (391)
299 cd06647 STKc_PAK_I Catalytic d 100.0 5.2E-38 1.1E-42 285.3 19.9 249 65-337 19-269 (293)
300 KOG0584 Serine/threonine prote 100.0 3.3E-39 7.1E-44 299.1 11.9 244 68-336 43-295 (632)
301 cd07835 STKc_CDK1_like Catalyt 100.0 3.5E-38 7.6E-43 284.9 18.3 261 67-336 1-279 (283)
302 cd07833 STKc_CDKL Catalytic do 100.0 3.3E-38 7.2E-43 285.6 17.5 262 66-336 2-284 (288)
303 cd07837 STKc_CdkB_plant Cataly 100.0 6.5E-38 1.4E-42 284.8 19.2 260 66-336 2-290 (295)
304 cd05633 STKc_GRK3 Catalytic do 100.0 4.8E-38 1E-42 283.5 18.1 242 72-337 1-255 (279)
305 cd07836 STKc_Pho85 Catalytic d 100.0 5.5E-38 1.2E-42 283.7 18.5 262 67-336 2-280 (284)
306 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.2E-38 1.1E-42 290.9 18.6 265 66-341 6-297 (337)
307 PHA02882 putative serine/threo 100.0 2.7E-38 5.9E-43 287.3 16.3 261 61-339 8-294 (294)
308 cd07840 STKc_CDK9_like Catalyt 100.0 5.1E-38 1.1E-42 284.1 18.0 261 67-336 1-283 (287)
309 cd07831 STKc_MOK Catalytic dom 100.0 4.6E-38 9.9E-43 283.8 17.6 258 67-336 1-278 (282)
310 cd08530 STKc_CNK2-like Catalyt 100.0 6.7E-38 1.4E-42 278.6 18.2 247 67-336 2-252 (256)
311 PHA03210 serine/threonine kina 100.0 2.2E-38 4.8E-43 307.1 16.4 269 61-336 144-453 (501)
312 cd06614 STKc_PAK Catalytic dom 100.0 2E-37 4.3E-42 280.4 21.4 249 66-336 20-269 (286)
313 cd08215 STKc_Nek Catalytic dom 100.0 1.4E-37 3.1E-42 276.4 20.1 249 67-336 2-254 (258)
314 cd05572 STKc_cGK_PKG Catalytic 100.0 2.4E-37 5.3E-42 276.2 21.6 240 73-336 1-251 (262)
315 cd06616 PKc_MKK4 Catalytic dom 100.0 1.2E-37 2.6E-42 282.2 19.9 255 67-336 6-266 (288)
316 cd05122 PKc_STE Catalytic doma 100.0 3E-37 6.4E-42 273.3 21.9 247 67-336 2-250 (253)
317 cd06648 STKc_PAK_II Catalytic 100.0 2.6E-37 5.6E-42 279.6 21.9 243 70-336 24-268 (285)
318 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5.4E-38 1.2E-42 284.9 17.5 260 66-336 6-287 (291)
319 cd07850 STKc_JNK Catalytic dom 100.0 1.2E-37 2.6E-42 290.4 20.2 259 64-337 15-311 (353)
320 cd06606 STKc_MAPKKK Catalytic 100.0 2.3E-37 4.9E-42 275.2 20.9 249 67-336 2-256 (260)
321 cd05577 STKc_GRK Catalytic dom 100.0 5.8E-38 1.3E-42 282.7 17.3 243 73-336 1-253 (277)
322 cd07852 STKc_MAPK15 Catalytic 100.0 1.2E-37 2.6E-42 288.5 19.9 265 63-337 5-295 (337)
323 cd08226 PK_STRAD_beta Pseudoki 100.0 1.4E-37 3.1E-42 286.9 20.0 260 71-336 4-307 (328)
324 KOG4645 MAPKKK (MAP kinase kin 100.0 8E-40 1.7E-44 323.1 5.2 248 70-337 1240-1494(1509)
325 cd07855 STKc_ERK5 Catalytic do 100.0 6.4E-38 1.4E-42 290.0 17.6 263 65-336 5-293 (334)
326 cd05118 STKc_CMGC Catalytic do 100.0 1.2E-37 2.7E-42 281.1 19.0 260 67-336 1-279 (283)
327 KOG4250 TANK binding protein k 100.0 1.6E-38 3.5E-43 298.0 13.5 259 70-339 18-308 (732)
328 cd07845 STKc_CDK10 Catalytic d 100.0 3.5E-38 7.7E-43 288.6 15.5 262 65-336 7-289 (309)
329 cd06635 STKc_TAO1 Catalytic do 100.0 6.9E-37 1.5E-41 281.0 23.7 249 66-340 26-280 (317)
330 PLN00009 cyclin-dependent kina 100.0 2.7E-37 5.8E-42 280.7 20.6 255 66-336 3-283 (294)
331 KOG0607 MAP kinase-interacting 100.0 6.9E-38 1.5E-42 268.4 15.5 261 66-336 78-360 (463)
332 cd08225 STKc_Nek5 Catalytic do 100.0 9.9E-38 2.2E-42 277.7 17.3 247 67-336 2-253 (257)
333 cd07865 STKc_CDK9 Catalytic do 100.0 1.9E-37 4.1E-42 283.6 19.6 263 66-336 13-306 (310)
334 KOG1025 Epidermal growth facto 100.0 9.8E-39 2.1E-43 302.4 11.3 256 68-346 699-962 (1177)
335 cd08216 PK_STRAD Pseudokinase 100.0 3E-37 6.5E-42 283.1 20.7 262 69-336 6-294 (314)
336 KOG0690 Serine/threonine prote 100.0 1.4E-38 3.1E-43 273.2 10.9 238 67-330 170-412 (516)
337 KOG0579 Ste20-like serine/thre 100.0 6.1E-39 1.3E-43 296.3 9.0 251 66-336 33-288 (1187)
338 cd07864 STKc_CDK12 Catalytic d 100.0 9.5E-38 2.1E-42 284.7 16.8 262 62-336 4-298 (302)
339 cd05611 STKc_Rim15_like Cataly 100.0 1.9E-37 4.2E-42 276.5 18.3 243 71-339 2-250 (260)
340 cd06657 STKc_PAK4 Catalytic do 100.0 4.4E-37 9.5E-42 279.0 20.7 242 71-336 26-269 (292)
341 cd05579 STKc_MAST_like Catalyt 100.0 1.6E-37 3.5E-42 277.3 17.4 245 73-339 1-256 (265)
342 KOG0612 Rho-associated, coiled 100.0 4.8E-38 1E-42 307.0 14.8 274 64-357 74-364 (1317)
343 cd05613 STKc_MSK1_N N-terminal 100.0 2E-37 4.3E-42 281.0 17.3 251 67-336 2-267 (290)
344 cd05606 STKc_beta_ARK Catalyti 100.0 3.6E-37 7.9E-42 277.6 18.9 241 72-336 1-254 (278)
345 cd06634 STKc_TAO2 Catalytic do 100.0 5.5E-37 1.2E-41 280.6 20.3 248 65-338 15-268 (308)
346 PHA03390 pk1 serine/threonine- 100.0 1E-36 2.2E-41 273.1 21.5 240 67-336 16-261 (267)
347 PTZ00024 cyclin-dependent prot 100.0 2.8E-37 6E-42 285.9 18.2 255 69-336 13-312 (335)
348 cd06627 STKc_Cdc7_like Catalyt 100.0 6.7E-37 1.5E-41 271.7 19.6 245 67-336 2-250 (254)
349 KOG0986 G protein-coupled rece 100.0 3.4E-38 7.3E-43 281.5 11.0 243 69-332 189-436 (591)
350 cd05583 STKc_MSK_N N-terminal 100.0 2.3E-37 5E-42 280.3 16.2 255 67-340 2-266 (288)
351 cd06618 PKc_MKK7 Catalytic dom 100.0 5.5E-37 1.2E-41 279.0 18.7 252 65-337 15-273 (296)
352 KOG0666 Cyclin C-dependent kin 100.0 4E-38 8.8E-43 268.9 10.2 268 66-338 25-338 (438)
353 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.7E-37 8E-42 285.8 17.6 262 65-336 5-299 (342)
354 cd07830 STKc_MAK_like Catalyti 100.0 8.7E-37 1.9E-41 275.7 19.4 260 67-336 1-279 (283)
355 KOG2052 Activin A type IB rece 100.0 6.6E-37 1.4E-41 272.9 18.1 271 61-343 207-505 (513)
356 cd06633 STKc_TAO3 Catalytic do 100.0 2.8E-36 6E-41 276.5 22.9 245 67-337 23-273 (313)
357 KOG1035 eIF-2alpha kinase GCN2 100.0 2.3E-37 5.1E-42 304.3 16.1 249 68-336 482-870 (1351)
358 cd06653 STKc_MEKK3_like_1 Cata 100.0 2E-36 4.2E-41 270.8 20.7 248 66-336 3-260 (264)
359 cd07834 STKc_MAPK Catalytic do 100.0 4.3E-37 9.4E-42 284.0 16.8 266 67-341 2-295 (330)
360 cd07838 STKc_CDK4_6_like Catal 100.0 1.7E-36 3.8E-41 274.1 20.3 255 67-336 1-283 (287)
361 cd05581 STKc_PDK1 Catalytic do 100.0 6.3E-37 1.4E-41 275.9 17.3 247 66-336 2-276 (280)
362 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.1E-36 2.4E-41 282.6 19.2 262 65-341 15-304 (343)
363 cd08222 STKc_Nek11 Catalytic d 100.0 7.2E-37 1.6E-41 272.8 17.0 249 66-336 1-256 (260)
364 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.6E-36 3.5E-41 279.7 18.9 258 65-337 10-288 (328)
365 cd07879 STKc_p38delta_MAPK13 C 100.0 1E-36 2.2E-41 282.8 16.9 261 66-342 16-304 (342)
366 cd07866 STKc_BUR1 Catalytic do 100.0 1.5E-36 3.3E-41 277.8 17.9 264 65-336 8-307 (311)
367 cd07857 STKc_MPK1 Catalytic do 100.0 2.2E-36 4.8E-41 279.5 18.4 261 67-336 2-291 (332)
368 KOG0200 Fibroblast/platelet-de 100.0 1.1E-36 2.3E-41 300.0 16.9 257 68-343 299-581 (609)
369 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.5E-36 7.5E-41 279.5 18.7 258 65-337 17-300 (345)
370 cd07851 STKc_p38 Catalytic dom 100.0 1.3E-36 2.7E-41 282.3 15.6 257 65-336 15-297 (343)
371 cd05123 STKc_AGC Catalytic dom 100.0 9.9E-36 2.1E-40 263.7 19.7 235 73-333 1-240 (250)
372 cd07829 STKc_CDK_like Catalyti 100.0 4.5E-36 9.7E-41 270.7 16.9 259 68-336 2-278 (282)
373 KOG0603 Ribosomal protein S6 k 100.0 1.2E-36 2.7E-41 283.0 13.1 238 65-336 322-562 (612)
374 KOG1151 Tousled-like protein k 100.0 2.5E-36 5.5E-41 268.9 12.8 269 54-336 452-740 (775)
375 KOG0671 LAMMER dual specificit 100.0 2.5E-37 5.4E-42 271.0 5.9 267 56-336 80-405 (415)
376 cd05576 STKc_RPK118_like Catal 100.0 9.5E-36 2.1E-40 262.1 15.0 219 76-331 4-223 (237)
377 KOG0662 Cyclin-dependent kinas 100.0 1.4E-35 3.1E-40 234.9 13.8 252 68-336 5-282 (292)
378 KOG0587 Traf2- and Nck-interac 100.0 2E-35 4.4E-40 282.4 17.3 252 66-336 20-281 (953)
379 KOG1006 Mitogen-activated prot 100.0 9.8E-38 2.1E-42 261.2 0.6 254 70-337 69-327 (361)
380 KOG0696 Serine/threonine prote 100.0 5E-36 1.1E-40 264.9 8.6 244 61-330 345-594 (683)
381 KOG0669 Cyclin T-dependent kin 100.0 1.6E-36 3.4E-41 252.2 5.0 266 63-336 15-314 (376)
382 cd05610 STKc_MASTL Catalytic d 100.0 1.6E-34 3.4E-39 288.6 20.1 143 66-215 5-152 (669)
383 KOG4236 Serine/threonine prote 100.0 9.7E-36 2.1E-40 270.1 8.7 240 71-334 570-816 (888)
384 KOG0614 cGMP-dependent protein 100.0 2.6E-35 5.7E-40 266.2 6.2 240 66-330 421-665 (732)
385 smart00220 S_TKc Serine/Threon 100.0 4.4E-33 9.5E-38 244.9 18.3 237 77-336 1-240 (244)
386 KOG0695 Serine/threonine prote 100.0 9.7E-34 2.1E-38 244.6 13.0 246 67-330 252-503 (593)
387 PLN03225 Serine/threonine-prot 100.0 2E-33 4.4E-38 274.2 15.8 264 65-336 132-449 (566)
388 KOG1024 Receptor-like protein 100.0 1.9E-33 4E-38 247.1 13.7 257 66-341 285-555 (563)
389 KOG1027 Serine/threonine prote 100.0 3.9E-34 8.3E-39 272.4 8.3 242 71-335 515-765 (903)
390 KOG0984 Mitogen-activated prot 100.0 9.8E-34 2.1E-38 229.0 8.4 202 69-276 50-257 (282)
391 KOG0608 Warts/lats-like serine 100.0 6.5E-33 1.4E-37 256.5 14.1 204 71-283 635-883 (1034)
392 PLN03224 probable serine/threo 100.0 3.6E-32 7.7E-37 259.4 17.3 262 64-336 144-499 (507)
393 KOG1290 Serine/threonine prote 100.0 5.5E-32 1.2E-36 243.8 14.6 149 47-200 59-221 (590)
394 KOG1152 Signal transduction se 100.0 7.5E-33 1.6E-37 253.8 8.9 195 66-272 562-770 (772)
395 KOG0664 Nemo-like MAPK-related 100.0 6.5E-34 1.4E-38 239.3 1.3 259 70-338 58-344 (449)
396 KOG0668 Casein kinase II, alph 100.0 1.7E-32 3.7E-37 225.2 9.6 257 64-336 37-321 (338)
397 KOG0670 U4/U6-associated splic 100.0 4.3E-33 9.3E-38 252.6 5.1 272 54-336 421-745 (752)
398 cd00180 PKc Catalytic domain o 100.0 4.3E-30 9.3E-35 220.5 20.2 210 73-337 1-214 (215)
399 KOG1345 Serine/threonine kinas 100.0 8.7E-31 1.9E-35 220.2 12.0 254 64-337 23-284 (378)
400 KOG0576 Mitogen-activated prot 100.0 5.4E-31 1.2E-35 245.3 6.6 252 66-336 16-270 (829)
401 KOG0665 Jun-N-terminal kinase 100.0 1.7E-30 3.7E-35 223.2 8.8 245 70-336 22-309 (369)
402 KOG1167 Serine/threonine prote 100.0 1.1E-29 2.4E-34 225.8 10.2 260 65-336 36-380 (418)
403 smart00221 STYKc Protein kinas 100.0 1.5E-28 3.2E-33 213.8 16.3 197 68-273 2-202 (225)
404 smart00750 KIND kinase non-cat 99.9 2.5E-27 5.4E-32 198.7 13.3 166 145-340 1-168 (176)
405 KOG0195 Integrin-linked kinase 99.9 3.1E-28 6.7E-33 205.1 5.1 249 66-341 191-446 (448)
406 PLN00181 protein SPA1-RELATED; 99.9 5.9E-28 1.3E-32 246.9 8.1 195 117-336 29-264 (793)
407 KOG1165 Casein kinase (serine/ 99.9 1.7E-25 3.7E-30 193.4 14.7 263 62-341 25-299 (449)
408 KOG1164 Casein kinase (serine/ 99.9 4.5E-25 9.7E-30 202.6 16.4 261 66-344 19-300 (322)
409 PRK09188 serine/threonine prot 99.9 4.2E-25 9E-30 202.6 12.6 164 62-243 15-194 (365)
410 KOG0590 Checkpoint kinase and 99.9 5.4E-26 1.2E-30 221.6 6.8 252 69-336 322-584 (601)
411 KOG1163 Casein kinase (serine/ 99.9 3.5E-25 7.5E-30 183.6 8.5 259 63-339 13-282 (341)
412 COG0515 SPS1 Serine/threonine 99.9 2.8E-22 6.1E-27 183.7 22.2 261 67-337 2-275 (384)
413 KOG1240 Protein kinase contain 99.9 2E-24 4.2E-29 211.8 5.2 252 66-341 24-295 (1431)
414 cd05147 RIO1_euk RIO kinase fa 99.9 3.1E-23 6.8E-28 175.1 11.2 138 70-217 2-167 (190)
415 PRK10359 lipopolysaccharide co 99.9 5.5E-23 1.2E-27 175.7 8.8 172 61-265 27-216 (232)
416 cd05145 RIO1_like RIO kinase f 99.9 3.6E-22 7.8E-27 169.2 13.7 140 70-219 2-169 (190)
417 KOG1023 Natriuretic peptide re 99.9 2.6E-22 5.7E-27 187.5 12.9 219 114-343 1-226 (484)
418 PF14531 Kinase-like: Kinase-l 99.9 5.1E-22 1.1E-26 174.8 9.8 232 69-328 16-288 (288)
419 PRK12274 serine/threonine prot 99.9 4.2E-21 9.1E-26 160.7 12.4 188 69-276 6-212 (218)
420 KOG4158 BRPK/PTEN-induced prot 99.8 1.3E-21 2.8E-26 173.3 7.8 200 118-339 274-512 (598)
421 KOG1166 Mitotic checkpoint ser 99.8 3.1E-20 6.6E-25 185.3 13.8 248 62-342 695-954 (974)
422 KOG0603 Ribosomal protein S6 k 99.8 1.3E-21 2.9E-26 183.0 3.6 231 73-339 2-242 (612)
423 smart00090 RIO RIO-like kinase 99.8 8.3E-20 1.8E-24 159.4 13.2 139 67-217 30-198 (237)
424 PRK10345 hypothetical protein; 99.8 7.8E-20 1.7E-24 155.9 12.7 132 71-214 8-156 (210)
425 cd05144 RIO2_C RIO kinase fami 99.8 1.3E-18 2.7E-23 148.6 12.0 134 67-217 17-175 (198)
426 PRK14879 serine/threonine prot 99.8 1.3E-18 2.8E-23 150.2 11.9 133 71-216 2-143 (211)
427 TIGR03724 arch_bud32 Kae1-asso 99.8 3.5E-18 7.6E-23 146.1 11.5 129 72-216 1-138 (199)
428 KOG0606 Microtubule-associated 99.8 5.7E-19 1.2E-23 173.6 6.6 209 67-332 85-307 (1205)
429 KOG1033 eIF-2alpha kinase PEK/ 99.8 4.7E-19 1E-23 163.0 4.3 173 134-332 330-507 (516)
430 PRK09605 bifunctional UGMP fam 99.7 6.6E-18 1.4E-22 165.4 12.2 132 68-216 336-476 (535)
431 cd05119 RIO RIO kinase family, 99.7 2.5E-17 5.4E-22 139.4 9.0 135 70-217 2-164 (187)
432 cd05120 APH_ChoK_like Aminogly 99.7 2.5E-16 5.4E-21 128.0 13.4 134 70-216 3-138 (155)
433 KOG0590 Checkpoint kinase and 99.7 3.7E-18 8E-23 166.9 0.9 255 66-336 21-285 (601)
434 PRK01723 3-deoxy-D-manno-octul 99.7 7E-16 1.5E-20 135.0 11.5 133 71-216 37-191 (239)
435 TIGR01982 UbiB 2-polyprenylphe 99.5 5.8E-14 1.3E-18 133.3 11.5 139 71-218 123-308 (437)
436 KOG1266 Protein kinase [Signal 99.5 2.2E-14 4.7E-19 125.0 4.8 204 113-336 120-330 (458)
437 cd05151 ChoK Choline Kinase (C 99.5 2.7E-13 5.8E-18 112.7 10.3 130 71-216 4-136 (170)
438 KOG0601 Cyclin-dependent kinas 99.5 9.2E-14 2E-18 130.6 7.4 252 61-336 110-378 (524)
439 PRK04750 ubiB putative ubiquin 99.4 1.5E-13 3.3E-18 132.1 5.1 138 71-219 125-316 (537)
440 cd05146 RIO3_euk RIO kinase fa 99.4 8.8E-12 1.9E-16 104.6 13.7 136 71-218 3-175 (197)
441 KOG1243 Protein kinase [Genera 99.4 9.9E-12 2.2E-16 118.3 14.7 165 86-267 34-199 (690)
442 cd05154 ACAD10_11_like Acyl-Co 99.3 3.3E-11 7.1E-16 104.6 13.8 141 71-216 4-206 (223)
443 KOG3741 Poly(A) ribonuclease s 99.3 7E-11 1.5E-15 109.4 15.3 219 77-340 288-524 (655)
444 COG3642 Mn2+-dependent serine/ 99.2 1E-10 2.2E-15 95.1 11.0 130 71-216 2-140 (204)
445 PF01163 RIO1: RIO1 family; I 99.2 2.3E-10 5.1E-15 95.6 10.9 124 80-217 1-156 (188)
446 KOG3087 Serine/threonine prote 99.2 1.7E-10 3.6E-15 93.4 9.4 141 71-217 13-166 (229)
447 COG4248 Uncharacterized protei 99.1 7E-10 1.5E-14 100.5 11.2 266 69-344 15-303 (637)
448 KOG0601 Cyclin-dependent kinas 99.1 1.8E-11 4E-16 115.3 0.9 241 68-339 268-516 (524)
449 COG0478 RIO-like serine/threon 99.1 1.2E-09 2.7E-14 94.0 11.7 136 67-218 93-253 (304)
450 KOG0606 Microtubule-associated 99.1 1E-10 2.2E-15 116.3 4.0 242 70-332 809-1084(1205)
451 PRK15123 lipopolysaccharide co 99.0 6.8E-09 1.5E-13 92.0 11.8 132 79-216 36-194 (268)
452 KOG2137 Protein kinase [Signal 98.9 6E-10 1.3E-14 106.8 0.9 151 171-336 106-264 (700)
453 COG0661 AarF Predicted unusual 98.8 3.8E-08 8.3E-13 94.5 9.8 140 71-219 131-317 (517)
454 COG1718 RIO1 Serine/threonine 98.7 4E-07 8.6E-12 77.9 12.4 137 71-218 54-217 (268)
455 TIGR02172 Fb_sc_TIGR02172 Fibr 98.6 6.4E-07 1.4E-11 77.8 13.1 132 71-215 7-181 (226)
456 PF06293 Kdo: Lipopolysacchari 98.6 2.3E-07 5.1E-12 79.4 8.6 105 105-216 56-170 (206)
457 KOG1235 Predicted unusual prot 98.6 3.7E-07 8E-12 87.5 10.2 139 71-219 167-357 (538)
458 PRK09902 hypothetical protein; 98.5 1.5E-06 3.3E-11 73.3 11.2 135 74-215 27-178 (216)
459 PF06176 WaaY: Lipopolysacchar 98.4 3.3E-06 7.1E-11 71.6 11.5 133 66-215 32-182 (229)
460 cd05150 APH Aminoglycoside 3'- 98.4 3.4E-06 7.4E-11 74.3 11.8 75 73-150 6-82 (244)
461 PF01636 APH: Phosphotransfera 98.4 2.2E-06 4.8E-11 74.7 10.4 77 71-149 3-84 (239)
462 PF12260 PIP49_C: Protein-kina 98.4 2.5E-05 5.5E-10 65.6 15.7 105 108-217 7-112 (188)
463 COG2112 Predicted Ser/Thr prot 98.3 5.5E-06 1.2E-10 67.2 9.8 130 68-217 25-156 (201)
464 PLN02876 acyl-CoA dehydrogenas 98.3 1.4E-05 3.1E-10 82.6 15.1 78 70-147 43-131 (822)
465 KOG0576 Mitogen-activated prot 98.2 3.2E-07 6.9E-12 87.7 0.5 184 69-272 246-431 (829)
466 cd05155 APH_ChoK_like_1 Unchar 98.2 2.2E-05 4.8E-10 68.7 12.0 74 71-149 3-83 (235)
467 PRK10593 hypothetical protein; 98.2 5.3E-05 1.2E-09 68.7 14.1 75 71-147 20-100 (297)
468 PF10707 YrbL-PhoP_reg: PhoP r 98.1 3.9E-05 8.4E-10 64.8 11.6 126 71-210 7-165 (199)
469 KOG1035 eIF-2alpha kinase GCN2 98.1 1.5E-05 3.1E-10 81.5 9.8 198 108-339 230-436 (1351)
470 cd05157 ETNK_euk Ethanolamine 98.1 4.1E-05 8.9E-10 67.0 11.5 74 71-148 4-80 (235)
471 TIGR02721 ycfN_thiK thiamine k 98.0 7.2E-05 1.6E-09 66.4 11.1 139 72-216 3-175 (256)
472 PRK05231 homoserine kinase; Pr 97.9 0.0002 4.4E-09 65.7 12.9 142 71-215 28-216 (319)
473 cd05153 HomoserineK_II Homoser 97.9 0.00021 4.6E-09 64.8 12.3 143 71-216 20-205 (296)
474 TIGR00938 thrB_alt homoserine 97.8 0.00029 6.2E-09 64.4 12.5 143 71-215 28-216 (307)
475 cd05156 ChoK_euk Choline Kinas 97.8 0.0002 4.3E-09 65.3 10.5 141 71-215 4-212 (302)
476 PRK09550 mtnK methylthioribose 97.8 0.0004 8.7E-09 65.1 12.3 73 71-145 32-116 (401)
477 PF13095 FTA2: Kinetochore Sim 97.7 0.00043 9.2E-09 58.2 10.7 124 65-214 37-206 (207)
478 KOG2270 Serine/threonine prote 97.6 0.00053 1.2E-08 62.3 10.2 139 70-217 149-314 (520)
479 KOG2268 Serine/threonine prote 97.6 7.6E-05 1.7E-09 66.5 4.8 134 67-217 94-252 (465)
480 PF03881 Fructosamin_kin: Fruc 97.4 0.0011 2.4E-08 59.5 9.2 72 71-145 23-97 (288)
481 PLN02236 choline kinase 97.2 0.003 6.5E-08 58.6 10.6 142 71-216 42-231 (344)
482 COG3173 Predicted aminoglycosi 97.2 0.0058 1.3E-07 55.4 11.5 133 75-218 35-230 (321)
483 cd05152 MPH2' Macrolide 2'-Pho 97.2 0.0053 1.1E-07 55.0 11.2 70 73-147 19-91 (276)
484 KOG1826 Ras GTPase activating 96.9 7.7E-05 1.7E-09 78.4 -3.1 161 107-271 1276-1440(2724)
485 COG2334 Putative homoserine ki 96.9 0.016 3.6E-07 53.0 12.3 141 72-215 33-227 (331)
486 TIGR02906 spore_CotS spore coa 96.9 0.011 2.5E-07 53.9 11.4 29 186-215 187-215 (313)
487 PLN02421 phosphotransferase, a 96.8 0.0096 2.1E-07 54.9 10.3 143 71-217 20-214 (330)
488 TIGR02904 spore_ysxE spore coa 96.8 0.017 3.6E-07 52.8 11.4 32 185-216 195-226 (309)
489 PF01633 Choline_kinase: Choli 96.7 0.0032 6.9E-08 54.1 5.4 123 89-215 2-173 (211)
490 PRK11768 serine/threonine prot 96.7 0.062 1.4E-06 49.4 14.1 72 76-147 36-114 (325)
491 PLN02756 S-methyl-5-thioribose 96.6 0.044 9.4E-07 51.5 12.7 71 71-144 38-119 (418)
492 PF07387 Seadorna_VP7: Seadorn 96.6 0.012 2.7E-07 49.9 7.9 151 76-268 73-225 (308)
493 TIGR01767 MTRK 5-methylthiorib 96.4 0.038 8.2E-07 51.0 10.5 71 72-144 2-84 (370)
494 COG5072 ALK1 Serine/threonine 96.2 0.023 4.9E-07 52.0 8.1 107 131-259 297-403 (488)
495 KOG1093 Predicted protein kina 96.0 0.0044 9.6E-08 58.9 2.7 46 105-151 27-73 (725)
496 PRK06148 hypothetical protein; 96.0 0.13 2.8E-06 54.8 13.5 143 71-216 31-236 (1013)
497 PTZ00384 choline kinase; Provi 95.9 0.093 2E-06 49.3 11.1 74 71-148 56-137 (383)
498 COG3001 Uncharacterized protei 95.5 0.48 1E-05 40.8 12.5 73 73-148 24-99 (286)
499 PTZ00296 choline kinase; Provi 95.1 0.2 4.4E-06 48.0 10.4 73 71-147 111-193 (442)
500 PRK12396 5-methylribose kinase 94.9 0.076 1.6E-06 49.7 6.7 72 71-144 35-117 (409)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-51 Score=378.99 Aligned_cols=284 Identities=44% Similarity=0.778 Sum_probs=237.1
Q ss_pred CCCccChhHHHHHHhhhh--cccCCCCcEEEEEEEEcCCceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEe
Q 048542 53 MPKRYSYPQIIAMTNHFT--HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFC 129 (373)
Q Consensus 53 ~~~~~~~~~i~~~~~~~~--~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~ 129 (373)
....|++.++..+|..|. +.||+|+||.||+|...+|..||||.+...... ..+|.+|+.++.+++|||+++++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 456799999999999999 699999999999999998899999988876655 66799999999999999999999999
Q ss_pred eeCC-eeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEE
Q 048542 130 SEGS-KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKV 208 (373)
Q Consensus 130 ~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl 208 (373)
.+.+ ..++|+|||++|+|.+.++..... +++|..+.+|+.++|+||+|||+.+.+.|+||||||+|||+|+++++||
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence 9988 599999999999999999765433 8999999999999999999999987778999999999999999999999
Q ss_pred eeccCcccCCCCCCceeeecc-cCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHH
Q 048542 209 SDFGLAKFHPKENDFVSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWV 287 (373)
Q Consensus 209 ~Dfg~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~ 287 (373)
+|||+|......... .... .||.+|+|||.+.. +..+.|+||||||+++.||++|+.+.+..... ....+..|.
T Consensus 219 sDFGLa~~~~~~~~~--~~~~~~gt~gY~~PEy~~~--g~lt~KsDVySFGVvllElitgr~~~d~~~~~-~~~~l~~w~ 293 (361)
T KOG1187|consen 219 SDFGLAKLGPEGDTS--VSTTVMGTFGYLAPEYAST--GKLTEKSDVYSFGVVLLELITGRKAVDQSRPR-GELSLVEWA 293 (361)
T ss_pred cCccCcccCCccccc--eeeecCCCCccCChhhhcc--CCcCcccccccchHHHHHHHhCCcccCCCCCc-ccccHHHHH
Confidence 999999655431111 1122 79999999999865 58899999999999999999999888765422 222367777
Q ss_pred HHHHhcCCCcccCcc----chhhH-HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 288 YDQLNKGGDLELQNV----TEIES-MIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~----~~~~~-~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
...+..+...++.+. .+.+. .....+..++.+|++.+|.+||+|.||++.|+....
T Consensus 294 ~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 294 KPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 777776543333221 22222 455679999999999999999999999999976543
No 2
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.4e-52 Score=381.72 Aligned_cols=246 Identities=26% Similarity=0.412 Sum_probs=213.9
Q ss_pred HHhhhhcccCCCCcEEEEEEEE-cCCceeEEEEecc----CccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVKMLEN----SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vaiK~~~~----~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
.+|...+.||+|||+.||.++. .+|+.||+|++.+ .....+...+|+++.+.|+|||||+++++|++.++.|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4677889999999999999997 7899999999987 4455688999999999999999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
|+|..++|..++ ...+++++.+++.+..||+.||.|||+. +|+|||||..|+|++++.++||+|||+|..+..
T Consensus 98 ELC~~~sL~el~----Krrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELL----KRRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHH----HhcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 999999999888 3568899999999999999999999998 999999999999999999999999999998875
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
+.+. -...+|||.|.|||++... ..+..+||||+||++|.||.|++||......+ ....++...
T Consensus 171 ~~Er--k~TlCGTPNYIAPEVl~k~--gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke--------ty~~Ik~~~---- 234 (592)
T KOG0575|consen 171 DGER--KKTLCGTPNYIAPEVLNKS--GHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE--------TYNKIKLNE---- 234 (592)
T ss_pred cccc--cceecCCCcccChhHhccC--CCCCchhhhhhhhHHHhhhhCCCCcccchHHH--------HHHHHHhcC----
Confidence 5332 2457899999999999865 67889999999999999999999998654321 222222221
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...|..++.+..+||.++|+.||.+|||+++|+.
T Consensus 235 ---Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 235 ---YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ---cccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 2334567889999999999999999999999985
No 3
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-52 Score=368.90 Aligned_cols=255 Identities=27% Similarity=0.372 Sum_probs=211.4
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEEE-cCCceeEEEEeccCcc--------CHHHHHHHHHHhcccCCCceeeEeeEeeeC
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVKMLENSKF--------SAEEFINEVSTIGRIHHVNVVQLLGFCSEG 132 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vaiK~~~~~~~--------~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 132 (373)
.....|.+.+.||+|+||.|-+|.. ++|+.||||++.+... ......+|+++|++|+|||||+++++++..
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ 248 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP 248 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence 3556677889999999999999985 4899999999976332 223457999999999999999999999999
Q ss_pred CeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC---CceEEe
Q 048542 133 SKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN---FIPKVS 209 (373)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~---~~~kl~ 209 (373)
...|+||||++||.|.+.+. .++.+.+.....+++|++.|+.|||++ ||+||||||+|||++.+ -.+||+
T Consensus 249 ds~YmVlE~v~GGeLfd~vv----~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKIt 321 (475)
T KOG0615|consen 249 DSSYMVLEYVEGGELFDKVV----ANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKIT 321 (475)
T ss_pred CceEEEEEEecCccHHHHHH----hccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEec
Confidence 99999999999999999984 345677788889999999999999999 99999999999999765 679999
Q ss_pred eccCcccCCCCCCceeeecccCCCCcccccccccccCCcC-cccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHH
Q 048542 210 DFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS-CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVY 288 (373)
Q Consensus 210 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s-~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~ 288 (373)
|||+|+..+.. ..+...|||+.|.|||++.+....+. .++|+||+||++|-+++|.+||........ ..
T Consensus 322 DFGlAK~~g~~---sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s-------l~ 391 (475)
T KOG0615|consen 322 DFGLAKVSGEG---SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS-------LK 391 (475)
T ss_pred ccchhhccccc---eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-------HH
Confidence 99999987633 35678899999999999977644444 488999999999999999999986654431 22
Q ss_pred HHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 289 DQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
+.+..+.. ...+.....++.+..+|+.+||..||++|||++|+++
T Consensus 392 eQI~~G~y---~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 392 EQILKGRY---AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred HHHhcCcc---cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 33333322 2223455678899999999999999999999999886
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-51 Score=373.61 Aligned_cols=259 Identities=29% Similarity=0.487 Sum_probs=227.1
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
+.....++.+.||+|-||.||.|.++....||+|.++......++|.+|+.+|++|+|+|||+++++|..+..+||||||
T Consensus 203 i~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~ 282 (468)
T KOG0197|consen 203 IPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEY 282 (468)
T ss_pred ecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEe
Confidence 44556678899999999999999999888999999999988999999999999999999999999999998899999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
|+.|+|.+++.. ..+..+.......++.|||+||+||+++ ++|||||.++||||+++..+||+|||+++... ++
T Consensus 283 m~~GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~-d~ 356 (468)
T KOG0197|consen 283 MPKGSLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIG-DD 356 (468)
T ss_pred cccCcHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccC-CC
Confidence 999999999954 3467788899999999999999999999 99999999999999999999999999999443 34
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.+.......-+..|.|||.+.. +.++.||||||||++||||+| |+.|++..... .+.+.+.+|.++..+
T Consensus 357 ~Y~~~~~~kfPIkWtAPEa~~~--~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~--------ev~~~le~GyRlp~P 426 (468)
T KOG0197|consen 357 EYTASEGGKFPIKWTAPEALNY--GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE--------EVLELLERGYRLPRP 426 (468)
T ss_pred ceeecCCCCCCceecCHHHHhh--CCcccccceeehhhhHHHHhccCCCCCCCCCHH--------HHHHHHhccCcCCCC
Confidence 4444455567789999999965 489999999999999999998 77777766543 367788888877655
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCC
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~ 342 (373)
. .++..+.++|..||+.+|++|||++.+...|+...
T Consensus 427 ~------~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 427 E------GCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred C------CCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 4 35678999999999999999999999999998754
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-50 Score=367.68 Aligned_cols=263 Identities=32% Similarity=0.495 Sum_probs=217.3
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeCC-eeEEEE
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEGS-KRALVY 139 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~lv~ 139 (373)
.....+.+.||+|+||+||+|.++....||||++...... .++|.+|+.+|.+++||||++++|+|.+.. ..++||
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 3344556779999999999999994444999999875544 458999999999999999999999999887 799999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC-eEecCcCCCCeeeeCCC-ceEEeeccCcccC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC-ILHFDIKPHNILLDHNF-IPKVSDFGLAKFH 217 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~-ivH~dikp~Nil~~~~~-~~kl~Dfg~~~~~ 217 (373)
||+++|+|.+++... .+..+++..+..++.|||+||.|||++ + |+||||||+|||++.++ ++||+|||+++..
T Consensus 120 Ey~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~ 194 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREK 194 (362)
T ss_pred EeCCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceee
Confidence 999999999999654 467899999999999999999999998 7 99999999999999997 9999999999865
Q ss_pred CCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCc
Q 048542 218 PKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 297 (373)
Q Consensus 218 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (373)
.... ...+...||+.|||||++.+....|+.|+||||||+++|||+||+.||...... .........+.++
T Consensus 195 ~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-------~~~~~v~~~~~Rp 265 (362)
T KOG0192|consen 195 VISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-------QVASAVVVGGLRP 265 (362)
T ss_pred cccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhcCCCC
Confidence 4322 223446799999999999842247999999999999999999999999876541 1122333344444
Q ss_pred ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCCCCC
Q 048542 298 ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDDLQ 346 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~~~~ 346 (373)
.++. .++..+..|+.+||+.||..||++.+++..|+.+.....
T Consensus 266 ~~p~------~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 266 PIPK------ECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred CCCc------cCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 4332 256788999999999999999999999999998766443
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-50 Score=352.68 Aligned_cols=250 Identities=26% Similarity=0.357 Sum_probs=206.2
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccC--ccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCe-eEEEEec
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENS--KFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSK-RALVYEY 141 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~-~~lv~e~ 141 (373)
..+..+.||+|..|+||++.++ ++..+|+|.+... ....+++.+|+++++..+|||||++||.|..+.. .+++|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 3345688999999999999987 7888999999543 3344789999999999999999999999998884 9999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
|.+|||++.+ ...+.+++.....++.++++||.|||+. .+|+||||||+|||++..|.+||||||.+..+.+.
T Consensus 160 MDgGSLd~~~----k~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 160 MDGGSLDDIL----KRVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred cCCCCHHHHH----hhcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 9999999988 3346799999999999999999999962 39999999999999999999999999999866443
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
......||..|||||.+.+. .|+.++||||||+.++|+.+|+.|+......... .......+-.+..+.
T Consensus 233 ---~a~tfvGT~~YMsPERi~g~--~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~---~~~Ll~~Iv~~ppP~--- 301 (364)
T KOG0581|consen 233 ---IANTFVGTSAYMSPERISGE--SYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLD---IFELLCAIVDEPPPR--- 301 (364)
T ss_pred ---hcccccccccccChhhhcCC--cCCcccceecccHHHHHHhhCCCCCCCcCCCCCC---HHHHHHHHhcCCCCC---
Confidence 34567799999999999886 8999999999999999999999999876221110 011122222222222
Q ss_pred cchhhH-HHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 302 VTEIES-MIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 302 ~~~~~~-~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
+|. .++.++++++..||+.||.+|||++|+++
T Consensus 302 ---lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 302 ---LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred ---CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 223 47889999999999999999999999976
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.3e-51 Score=344.43 Aligned_cols=263 Identities=25% Similarity=0.389 Sum_probs=217.7
Q ss_pred HHHhhhhcccCCCCcEEEEEEE-EcCCceeEEEEeccCccCH---HHHHHHHHHhcccCCCceeeEee-EeeeCC-eeEE
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLG-FCSEGS-KRAL 137 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~h~ni~~~~~-~~~~~~-~~~l 137 (373)
.+.|++.++||+|+||.||++. ..+|..+|.|.++-...+. .+...|+.+|++|+||||+++++ .+.++. -.++
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 4568889999999999999997 4589999999998655544 56889999999999999999998 444444 4899
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC-CCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCD-VCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~-~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
|||+|.+|+|...+......++.+++..+|.++.|++.||.++|+.-+ .-|.||||||.||+++.+|.+||+|||+++.
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 999999999999987766778889999999999999999999998311 1399999999999999999999999999998
Q ss_pred CCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCC
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGD 296 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
+.....+ ....+|||.||+||.+.+. .|+.|+||||+||++|||+.-.+||.+..- ....+.+..+..
T Consensus 178 l~s~~tf--A~S~VGTPyYMSPE~i~~~--~Y~~kSDiWslGCllyEMcaL~~PF~g~n~--------~~L~~KI~qgd~ 245 (375)
T KOG0591|consen 178 LSSKTTF--AHSLVGTPYYMSPERIHES--GYNFKSDIWSLGCLLYEMCALQSPFYGDNL--------LSLCKKIEQGDY 245 (375)
T ss_pred hcchhHH--HHhhcCCCcccCHHHHhcC--CCCcchhHHHHHHHHHHHHhcCCCcccccH--------HHHHHHHHcCCC
Confidence 8665443 3456799999999999886 899999999999999999999999987631 223445555533
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
+.++. ..+|.++..|+..|+..||+.||+.-.++..+...++
T Consensus 246 ~~~p~-----~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~~l~ 287 (375)
T KOG0591|consen 246 PPLPD-----EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQSELD 287 (375)
T ss_pred CCCcH-----HHhhhHHHHHHHHHccCCcccCCCcchHHHHHHHHhc
Confidence 22221 5788999999999999999999997666666665433
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-49 Score=349.10 Aligned_cols=247 Identities=25% Similarity=0.445 Sum_probs=203.0
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
.|.+.++||+|+||+||+|+++ ++..||||.+.+...+ .+.+..|+.+|+.++|||||.+++++..++..|+||||
T Consensus 11 ~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEy 90 (429)
T KOG0595|consen 11 DYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEY 90 (429)
T ss_pred cceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEe
Confidence 4556778999999999999976 6889999999876543 36678999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC------CceEEeeccCcc
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN------FIPKVSDFGLAK 215 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~------~~~kl~Dfg~~~ 215 (373)
|.||+|.+++. +.+.+++..+..++.|+|.||++||++ +|+||||||.|||++.. -.+||+|||+|+
T Consensus 91 C~gGDLs~yi~----~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 91 CNGGDLSDYIR----RRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred CCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 99999999994 345799999999999999999999999 99999999999999764 468999999999
Q ss_pred cCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 216 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 216 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
.+.... .....+|++.|||||++..+ +|+.|+|+||+|+++|++++|+.||......+ .....+++.
T Consensus 164 ~L~~~~---~a~tlcGSplYMAPEV~~~~--~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~e--------L~~~~~k~~ 230 (429)
T KOG0595|consen 164 FLQPGS---MAETLCGSPLYMAPEVIMSQ--QYDAKADLWSIGTILYQCLTGKPPFDAETPKE--------LLLYIKKGN 230 (429)
T ss_pred hCCchh---HHHHhhCCccccCHHHHHhc--cccchhhHHHHHHHHHHHHhCCCCccccCHHH--------HHHHHhccc
Confidence 876433 23467899999999999764 89999999999999999999999998655332 222333332
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
... ...+...+..+.+|+...++.+|.+|.+..+-..
T Consensus 231 ~~~----~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~ 267 (429)
T KOG0595|consen 231 EIV----PVLPAELSNPLRELLISLLQRNPKDRISFEDFFD 267 (429)
T ss_pred ccc----CchhhhccCchhhhhhHHHhcCccccCchHHhhh
Confidence 221 2233445566778888888888888887776543
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3e-47 Score=333.16 Aligned_cols=241 Identities=25% Similarity=0.359 Sum_probs=203.1
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEE
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 138 (373)
...+++.+.||+|+||+|+.++.+ +++.||+|++++... ..+....|..+|..++||+||+++..|.+...+|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 345577899999999999999855 788999999987543 346678999999999999999999999999999999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
+||+.||.|...+ ++.+.+++..+.-++..|+.||.|||+. +|+|||+||+|||+|.+|+++|+|||+++..-
T Consensus 104 ld~~~GGeLf~hL----~~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 104 LDYLNGGELFYHL----QREGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EeccCCccHHHHH----HhcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 9999999998888 4457799999999999999999999998 99999999999999999999999999998543
Q ss_pred CCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
.... .....+||+.|||||++.+. .++..+|+||+|+++|+|++|.+||...+... ..+.+..+...
T Consensus 177 ~~~~--~t~tfcGT~eYmAPEil~~~--gy~~~vDWWsLGillYeML~G~pPF~~~~~~~--------~~~~I~~~k~~- 243 (357)
T KOG0598|consen 177 KDGD--ATRTFCGTPEYMAPEILLGK--GYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK--------MYDKILKGKLP- 243 (357)
T ss_pred cCCC--ccccccCCccccChHHHhcC--CCCcccchHhHHHHHHHHhhCCCCCcCccHHH--------HHHHHhcCcCC-
Confidence 3322 23457899999999999886 88999999999999999999999998776432 23333333311
Q ss_pred cCccchhhHHHHHHHHHHHHhhcCCCCCCCC
Q 048542 299 LQNVTEIESMIARKLCMIGLWCIQVKAADRP 329 (373)
Q Consensus 299 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 329 (373)
..+..++.+.++++...|+.||++|.
T Consensus 244 -----~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 244 -----LPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -----CCCccCCHHHHHHHHHHhccCHHHhc
Confidence 12233567899999999999999996
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4.2e-47 Score=322.72 Aligned_cols=260 Identities=24% Similarity=0.330 Sum_probs=202.6
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCH---HHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
.|+-..++|+|+||.||+|+++ +|+.||||++..++.+. +-.++|+++|++++|+|+|.++++|......++|+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 3555678999999999999977 79999999998766543 4468999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
|+..-|+++- .....++.+.+.+++.|++.|+.|||++ +++||||||+|||++.+|.+||||||.|+.+...+
T Consensus 83 ~dhTvL~eLe----~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 83 CDHTVLHELE----RYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred cchHHHHHHH----hccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence 9775444432 2234588899999999999999999999 99999999999999999999999999999876433
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc--------chHHHHHHHhc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY--------FPSWVYDQLNK 293 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~--------~~~~~~~~~~~ 293 (373)
. .++....|-.|.|||.+.|. .+|+..+||||+||++.||++|.+.|++.+....-.. ++.- ......
T Consensus 156 d--~YTDYVATRWYRaPELLvGD-tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prh-q~iF~~ 231 (396)
T KOG0593|consen 156 D--NYTDYVATRWYRAPELLVGD-TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRH-QSIFSS 231 (396)
T ss_pred c--hhhhhhhhhhccChhhhccc-CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHH-HHHhcc
Confidence 2 24556689999999999875 5889999999999999999999998886553211000 0000 001111
Q ss_pred -----CC-CcccCccchhh---HHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 -----GG-DLELQNVTEIE---SMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 -----~~-~~~~~~~~~~~---~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
|. .++......+. +.++.-+.+++..||+.||++|++.++++.
T Consensus 232 N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 232 NPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11 11222222222 345567899999999999999999999864
No 11
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-47 Score=338.21 Aligned_cols=264 Identities=23% Similarity=0.360 Sum_probs=212.0
Q ss_pred HHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHH--HHHHHHHhcccC-CCceeeEeeEeeeCC-eeEE
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEE--FINEVSTIGRIH-HVNVVQLLGFCSEGS-KRAL 137 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~--~~~e~~~l~~l~-h~ni~~~~~~~~~~~-~~~l 137 (373)
.-.+|.+.++||.|+||.||+|+.+ +|+.||||.++..-...++ -++|+..|++++ ||||+++.+++.+.. .+|+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 3458899999999999999999855 7899999999876655544 368999999998 999999999998877 9999
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
||||| ..+|++++.. ++..+++..+..|+.||++||+|+|.+ |+.|||+||+|||+..+..+||+|||+|+-.
T Consensus 88 VfE~M-d~NLYqLmK~---R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 88 VFEFM-DCNLYQLMKD---RNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eHHhh-hhhHHHHHhh---cCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 99999 5599988843 368899999999999999999999998 9999999999999999999999999999976
Q ss_pred CCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccc---------cccchHHHH
Q 048542 218 PKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSS---------KAYFPSWVY 288 (373)
Q Consensus 218 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~---------~~~~~~~~~ 288 (373)
..... ++..+.|-.|+|||++... +.|+.+.|+||+||+++|+.+-++.|++...... ......|..
T Consensus 161 ~SkpP---YTeYVSTRWYRAPEvLLrs-~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~e 236 (538)
T KOG0661|consen 161 RSKPP---YTEYVSTRWYRAPEVLLRS-GYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPE 236 (538)
T ss_pred ccCCC---cchhhhcccccchHHhhhc-cccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchh
Confidence 55443 4556688999999999876 7899999999999999999999999987653211 000111111
Q ss_pred -HHHhcCCCcccCc-----cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 289 -DQLNKGGDLELQN-----VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 289 -~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
..+.......++. ...+-...+.++.+|+.+|+.+||.+|||++|.++.
T Consensus 237 g~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 237 GYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1111111122211 122333477899999999999999999999999874
No 12
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-45 Score=328.23 Aligned_cols=259 Identities=22% Similarity=0.310 Sum_probs=211.3
Q ss_pred HHHhhhhcccCCCCcEEEEEEE-EcCCceeEEEEeccCccCH--HHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSA--EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vaiK~~~~~~~~~--~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
...|++...||.|..++||+|+ ...++.||||++...+.+. +.+.+|+..|..++||||++++..|..+..+|+||+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 4567888999999999999998 4578999999998765544 788999999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
||.+||+.+.+...-. ..+.+..+..|.+++++||.|||.+ |.+|||||+.|||++.+|.+||+|||.+..+...
T Consensus 105 fMa~GS~ldIik~~~~--~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYP--DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred hhcCCcHHHHHHHHcc--ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 9999999998854433 3389999999999999999999999 9999999999999999999999999987655433
Q ss_pred CCce--eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 221 NDFV--SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 221 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
+... ..+...||++|||||++..+...|+.|+||||||+...||.+|..||...-+ ..+.-.-- .+.+.
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP--------mkvLl~tL-qn~pp 250 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP--------MKVLLLTL-QNDPP 250 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh--------HHHHHHHh-cCCCC
Confidence 3221 1255689999999999766667899999999999999999999999974432 11111111 11111
Q ss_pred c----CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 299 L----QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 299 ~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
. ....+-...++..+++++..||+.||++|||++++++
T Consensus 251 ~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 251 TLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0 1122334567789999999999999999999999975
No 13
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-46 Score=341.53 Aligned_cols=248 Identities=26% Similarity=0.376 Sum_probs=205.9
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccC----cc--CHHHHHHHHHHhcccC-CCceeeEeeEeeeCCee
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENS----KF--SAEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKR 135 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~----~~--~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~ 135 (373)
...|.+.+.||+|+||+|+.|.+. ++..||+|++... .. ..+.+.+|+.+++.++ ||||+++++++......
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 346778899999999999999755 7899999987764 21 2356678999999998 99999999999999999
Q ss_pred EEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC-CceEEeeccCc
Q 048542 136 ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLA 214 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~-~~~kl~Dfg~~ 214 (373)
++||||+.+|+|.+++. ..+++.+..+..++.|++.|++|||+. ||+||||||+|||++.+ +++||+|||++
T Consensus 96 ~ivmEy~~gGdL~~~i~----~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIV----NKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEecCCccHHHHHH----HcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 99999999999999994 356788999999999999999999998 99999999999999999 99999999999
Q ss_pred ccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcC
Q 048542 215 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKG 294 (373)
Q Consensus 215 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 294 (373)
..... ........+||+.|+|||++.+....-+.++||||+|++||.|++|+.||...... . ....+..+
T Consensus 169 ~~~~~--~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~-------~-l~~ki~~~ 238 (370)
T KOG0583|consen 169 AISPG--EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP-------N-LYRKIRKG 238 (370)
T ss_pred cccCC--CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH-------H-HHHHHhcC
Confidence 97741 11234677899999999999886223357899999999999999999999874321 1 22222222
Q ss_pred CCcccCccchhhHHH-HHHHHHHHHhhcCCCCCCCCCHHHHH
Q 048542 295 GDLELQNVTEIESMI-ARKLCMIGLWCIQVKAADRPSMTKVL 335 (373)
Q Consensus 295 ~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dp~~Rps~~ell 335 (373)
. ..++..+ +.+++.|+.+|+..||.+|+|+.+++
T Consensus 239 ~-------~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 239 E-------FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred C-------ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 1 1223344 78899999999999999999999999
No 14
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-46 Score=335.86 Aligned_cols=264 Identities=23% Similarity=0.326 Sum_probs=208.1
Q ss_pred HHHhhhhcccCCCCcEEEEEEEE-cCCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeC--CeeEE
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEG--SKRAL 137 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~~~l 137 (373)
...|+-.++||+|+||.||+|+. .+|+.||+|.++..... ..-..+|+.+|++|+||||+++.+...+. ..+|+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 45667778999999999999984 58999999999875533 34568999999999999999999988776 68999
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
|+|||++ +|.-++. ..+..+++.++..++.|++.||.|||++ +|+|||||.+|||+|.+|.+||+|||+|+++
T Consensus 196 VFeYMdh-DL~GLl~---~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLS---SPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred EEecccc-hhhhhhc---CCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeec
Confidence 9999976 7777773 3356799999999999999999999998 9999999999999999999999999999977
Q ss_pred CCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc---------chHHHH
Q 048542 218 PKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY---------FPSWVY 288 (373)
Q Consensus 218 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~---------~~~~~~ 288 (373)
..... ..++..+-|..|.|||.+.|. ..|+.++|+||.|||+.||+.|++.|.....-+.-.. ...|..
T Consensus 269 ~~~~~-~~~T~rVvTLWYRpPELLLG~-t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~ 346 (560)
T KOG0600|consen 269 TPSGS-APYTSRVVTLWYRPPELLLGA-TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPV 346 (560)
T ss_pred cCCCC-cccccceEEeeccChHHhcCC-cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccc
Confidence 54432 235677789999999999987 6899999999999999999999999876553211100 111111
Q ss_pred HHHhcCCC--ccc---CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 289 DQLNKGGD--LEL---QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 289 ~~~~~~~~--~~~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..+..... +.. ....+.-..++....+|+..+|..||.+|.|+.++++
T Consensus 347 ~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 347 SKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 11110000 000 0112223445678899999999999999999999875
No 15
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-46 Score=329.63 Aligned_cols=258 Identities=29% Similarity=0.366 Sum_probs=204.9
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEeeeCC--eeEEEEec
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFCSEGS--KRALVYEY 141 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--~~~lv~e~ 141 (373)
.+...+.||+|+||.||++... +|...|||.+...... .+.+.+|+.+|.+++|||||+++|...... ..+++|||
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence 3456789999999999999866 5899999998765322 466889999999999999999999754444 68999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC-CCceEEeeccCcccCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH-NFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~-~~~~kl~Dfg~~~~~~~~ 220 (373)
+++|+|.+++... +.++++..+..+..|+++||+|||++ |++||||||+|||++. ++.+||+|||++......
T Consensus 98 ~~~GsL~~~~~~~---g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 98 APGGSLSDLIKRY---GGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred cCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 9999999999433 22799999999999999999999998 9999999999999999 799999999999865531
Q ss_pred C-CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 221 N-DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 221 ~-~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
. .........||+.|||||++.+. .....++||||+||++.||+||+.||... . ....+..........
T Consensus 172 ~~~~~~~~~~~Gtp~~maPEvi~~g-~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~-----~~~~~~~~ig~~~~~--- 241 (313)
T KOG0198|consen 172 GTKSDSELSVQGTPNYMAPEVIRNG-EVARRESDIWSLGCTVVEMLTGKPPWSEF-F-----EEAEALLLIGREDSL--- 241 (313)
T ss_pred cccccccccccCCccccCchhhcCC-CcCCccchhhhcCCEEEeccCCCCcchhh-c-----chHHHHHHHhccCCC---
Confidence 1 11122346799999999999741 23335899999999999999999999753 1 011222222222211
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCC
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~ 342 (373)
+.++..++.+.++++.+|++.||.+|||++++++..--..
T Consensus 242 ---P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 242 ---PEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred ---CCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 2555668889999999999999999999999998665443
No 16
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.4e-46 Score=345.63 Aligned_cols=245 Identities=25% Similarity=0.353 Sum_probs=209.5
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
+++++.||+|+.|.|-+|++. +|+.+|||++.+.. .....+.+|+-+|+.+.|||++.+|+++++..++|+|.||
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy 93 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY 93 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence 467799999999999999865 89999999997652 2336678999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++|.|.+++ ...+++++.++.+++.||+.|+.|||.. +|+|||+||+|+|+|..+++||+|||+|..-..+.
T Consensus 94 v~gGELFdyl----v~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 94 VPGGELFDYL----VRKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred cCCchhHHHH----HhhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 9999999999 4567899999999999999999999998 99999999999999999999999999998654433
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
.....||++.|.+||++.|. ...+.++||||+|+|||.||+|+.||++..... +...+..|.
T Consensus 167 ---lLeTSCGSPHYA~PEIV~G~-pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~--------LLlKV~~G~------ 228 (786)
T KOG0588|consen 167 ---LLETSCGSPHYAAPEIVSGR-PYDGRPSDVWSCGVILFALLTGKLPFDDDNIRV--------LLLKVQRGV------ 228 (786)
T ss_pred ---cccccCCCcccCCchhhcCC-CCCCCccccchhHHHHHHHHhCCCCCCCccHHH--------HHHHHHcCc------
Confidence 34567899999999999987 445779999999999999999999998655321 223333332
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
-+.|..++.++++|+.+|+..||+.|+|++||++.
T Consensus 229 -f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 229 -FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred -ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 23335667889999999999999999999999983
No 17
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.6e-45 Score=340.02 Aligned_cols=262 Identities=27% Similarity=0.438 Sum_probs=204.5
Q ss_pred HHHhhhhcccCCCCcEEEEEEEE------cCCceeEEEEeccCccC--HHHHHHHHHHhccc-CCCceeeEeeEeeeC-C
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFS--AEEFINEVSTIGRI-HHVNVVQLLGFCSEG-S 133 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~-~ 133 (373)
..+|++.+.||+|+||.||+|.+ .++..||+|+++..... ...+.+|+.++..+ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 34678889999999999999974 23568999998754322 35688999999999 899999999988654 4
Q ss_pred eeEEEEeccCcCCccccccCCCC---------------------------------------------------------
Q 048542 134 KRALVYEYMPNGSLDRHVFPKES--------------------------------------------------------- 156 (373)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 156 (373)
..+++|||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 58899999999999888753211
Q ss_pred -CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeecccCCCCc
Q 048542 157 -RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGY 235 (373)
Q Consensus 157 -~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y 235 (373)
...++++..+..++.|+++||+|||+. +++||||||+|||++.++.+||+|||++................++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 023578888999999999999999998 9999999999999999999999999999765433222222233466789
Q ss_pred ccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHH
Q 048542 236 IAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLC 314 (373)
Q Consensus 236 ~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 314 (373)
+|||.+.+. .++.++|||||||++|+|++ |..||....... .....+..+..... +..++..+.
T Consensus 243 ~aPE~~~~~--~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-------~~~~~~~~~~~~~~------~~~~~~~l~ 307 (338)
T cd05102 243 MAPESIFDK--VYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-------EFCQRLKDGTRMRA------PENATPEIY 307 (338)
T ss_pred cCcHHhhcC--CCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-------HHHHHHhcCCCCCC------CCCCCHHHH
Confidence 999998764 78899999999999999997 999987543221 12222333322221 123456789
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 315 MIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 315 ~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
+|+.+||+.||.+|||+.++++.|+.++.
T Consensus 308 ~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 308 RIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999998654
No 18
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-46 Score=337.10 Aligned_cols=247 Identities=24% Similarity=0.339 Sum_probs=204.6
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCH----HHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSA----EEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~----~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
.+.|++.||.|+|++|++|+.+ ++..||||++.+..... +-...|-.+|.+| .||.|++++.-|.++..+|+|+
T Consensus 74 DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvL 153 (604)
T KOG0592|consen 74 DFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVL 153 (604)
T ss_pred hcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEE
Confidence 4678899999999999999855 78999999987643322 3456788888888 7999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
||+++|+|.+++ .+-+.+++...+.++.+|+.||+|||++ |||||||||+|||+|++++++|+|||.|..+..
T Consensus 154 e~A~nGdll~~i----~K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 154 EYAPNGDLLDLI----KKYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EecCCCcHHHHH----HHhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 999999999999 4457799999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCc---------ee--eecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHH
Q 048542 220 ENDF---------VS--ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVY 288 (373)
Q Consensus 220 ~~~~---------~~--~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~ 288 (373)
.... .. ....+||..|.+||++... ..+..+|+|+|||++|+|+.|.+||..... ..++
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~--~~~~~sDiWAlGCilyQmlaG~PPFra~Ne--------yliF 296 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDS--PAGPSSDLWALGCILYQMLAGQPPFRAANE--------YLIF 296 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCC--CCCcccchHHHHHHHHHHhcCCCCCccccH--------HHHH
Confidence 2211 11 1446799999999999775 778899999999999999999999986543 1122
Q ss_pred HHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 289 DQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
+.+... + .++++.++..+.+|+.+.|..||.+|+|.++|-+
T Consensus 297 qkI~~l---~----y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 297 QKIQAL---D----YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHHh---c----ccCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 222221 1 2333445578899999999999999999999865
No 19
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.1e-46 Score=355.29 Aligned_cols=262 Identities=27% Similarity=0.448 Sum_probs=219.1
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCee
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKR 135 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 135 (373)
...-.+.+.||+|+||+||+|+.. +...||||.++..... ..+|.+|++++..++|||||+++|+|.+++..
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 334456789999999999999743 3457999999986655 37899999999999999999999999999999
Q ss_pred EEEEeccCcCCccccccCCCC------C----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCc
Q 048542 136 ALVYEYMPNGSLDRHVFPKES------R----GQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFI 205 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~------~----~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~ 205 (373)
++|+|||..|+|.++|..... . ..+++..+.+.|+.|||.||.||-++ .+|||||-.+|+||+++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceE
Confidence 999999999999999954321 1 23488999999999999999999998 9999999999999999999
Q ss_pred eEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccch
Q 048542 206 PKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFP 284 (373)
Q Consensus 206 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~ 284 (373)
+||+|||+++..-..+.+..-....-+.+|||||.+.. +.||.+||||||||+|||+++ |..||....++
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly--~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~------- 712 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY--GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ------- 712 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhc--CcccchhhhhhhhhhhhhhhccccCcccccchH-------
Confidence 99999999986544433332223345679999999864 599999999999999999997 88898876654
Q ss_pred HHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCCC
Q 048542 285 SWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344 (373)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~~ 344 (373)
.+.+.+..+..+.-+ .+++.++++||..||+.+|++||+++||-..|+...+.
T Consensus 713 -EVIe~i~~g~lL~~P------e~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 713 -EVIECIRAGQLLSCP------ENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred -HHHHHHHcCCcccCC------CCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 367777777764443 45567899999999999999999999999999987654
No 20
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.4e-45 Score=305.27 Aligned_cols=262 Identities=22% Similarity=0.325 Sum_probs=205.9
Q ss_pred HhhhhcccCCCCcEEEEEEEE-cCCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 66 TNHFTHKLGQGGFGSVYKGQL-QTGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
+|.-.+++|+|.||.||+|+. ++|+.||||.++..+.. .....+|++.|+.++|+||+.++++|...+...+|+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 566678999999999999984 58999999999876554 35678999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
|+. +|...+. .+...++...+..++.++++|++|||++ .|.||||||.|+|++.+|.+||+|||+++......
T Consensus 83 m~t-dLe~vIk---d~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 83 MPT-DLEVVIK---DKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred ccc-cHHHHhc---ccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 954 8888873 4467899999999999999999999998 99999999999999999999999999999887665
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccc------------ccchHHHH-
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSK------------AYFPSWVY- 288 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~------------~~~~~~~~- 288 (373)
.... ....|-.|.|||.+.|. ..|+..+|+||.||++.||+-|.+-|.+....+.- ...+++..
T Consensus 156 ~~~~--~~V~TRWYRAPELLfGs-r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 156 RIQT--HQVVTRWYRAPELLFGS-RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred cccc--cceeeeeccChHHhccc-hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccc
Confidence 4332 23678899999999886 68899999999999999999998777654432110 00010000
Q ss_pred HHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 289 DQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
....+-...+.+....+-...+.++.+|+..||..||.+|+|++|+++.
T Consensus 233 pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 233 PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 0000000001111111223346678999999999999999999999873
No 21
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2e-45 Score=338.37 Aligned_cols=264 Identities=26% Similarity=0.464 Sum_probs=215.6
Q ss_pred HHHHHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCH---HHHHHHHHHhcccCCCceeeEeeEeeeCCeeEE
Q 048542 61 QIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAL 137 (373)
Q Consensus 61 ~i~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 137 (373)
+|......+...||+|.||+||+|.|. +.||||+++...-+. +.|++|+.++++-+|.||+-+.|+|..+.. .|
T Consensus 388 eIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AI 464 (678)
T KOG0193|consen 388 EIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AI 464 (678)
T ss_pred ccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-ee
Confidence 344455567799999999999999986 679999998765444 679999999999999999999999988777 99
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
|+.+|+|.+|+.+++..+ .++.......|+.||++|+.|||.+ +|+|||||..||++.++++|||+|||++..-
T Consensus 465 iTqwCeGsSLY~hlHv~e---tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 465 ITQWCEGSSLYTHLHVQE---TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred eehhccCchhhhhccchh---hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeee
Confidence 999999999999996544 5688889999999999999999998 9999999999999999999999999999754
Q ss_pred CCCCCceeeecccCCCCcccccccccc-cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCC
Q 048542 218 PKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGD 296 (373)
Q Consensus 218 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
..-..........|...|||||++..+ ...|+..+||||||+++|||++|..||.....++- .+..++.
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI----------ifmVGrG 608 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI----------IFMVGRG 608 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe----------EEEeccc
Confidence 433333344556788999999998532 34789999999999999999999999984332211 0112222
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
...++........++++++|+..||..++++||++.+|+..|+.++.
T Consensus 609 ~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 609 YLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 22233344445667899999999999999999999999999988754
No 22
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-45 Score=333.58 Aligned_cols=246 Identities=28% Similarity=0.408 Sum_probs=207.1
Q ss_pred hhhhcccCCCCcEEEEEEE-EcCCceeEEEEeccCccCH-HHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 67 NHFTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSA-EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~-~~~~~~vaiK~~~~~~~~~-~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
|.-..+||+|+.|.||.+. ..+++.||||.+....... +-+++|+.+|+..+|+|||.+++.|...+.+++|||||+|
T Consensus 275 y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~g 354 (550)
T KOG0578|consen 275 YTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEG 354 (550)
T ss_pred hcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCC
Confidence 3444789999999999997 4478899999998766655 5678999999999999999999999888999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|+|.+.+ ....+++.++..|+..++.||+|||.+ +|+|||||.+|||++.+|.+||+|||+|..+.....
T Consensus 355 gsLTDvV-----t~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-- 424 (550)
T KOG0578|consen 355 GSLTDVV-----TKTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-- 424 (550)
T ss_pred Cchhhhh-----hcccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC--
Confidence 9999988 244589999999999999999999999 999999999999999999999999999987654432
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
.-....||+.|||||+.... .|+.|.||||||++++||+.|.+||-....-. ....+...+.+.+...
T Consensus 425 KR~TmVGTPYWMAPEVvtrk--~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr--------AlyLIa~ng~P~lk~~-- 492 (550)
T KOG0578|consen 425 KRSTMVGTPYWMAPEVVTRK--PYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR--------ALYLIATNGTPKLKNP-- 492 (550)
T ss_pred ccccccCCCCccchhhhhhc--ccCccccchhhhhHHHHHhcCCCCccCCChHH--------HHHHHhhcCCCCcCCc--
Confidence 12356799999999999876 89999999999999999999999997643211 1122233333443332
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..++..+++++.+||+.|+.+|+|+.|+|+
T Consensus 493 --~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 493 --EKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred --cccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 446788999999999999999999999987
No 23
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-44 Score=306.64 Aligned_cols=234 Identities=27% Similarity=0.362 Sum_probs=203.0
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.+++.+.||.|+||.|.+++.+ +|..+|+|++.+... +.+...+|..+|+.+.||+++++++.+.+.+..|+|||
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvme 124 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVME 124 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEe
Confidence 4567899999999999999976 678999999987543 33667899999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|.+||.|..++ .+.+++++..++-++.+|+.|++|||+. +|++||+||+|||+|.+|.+||+|||.|......
T Consensus 125 yv~GGElFS~L----rk~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 125 YVPGGELFSYL----RKSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred ccCCccHHHHH----HhcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 99999999999 4567899999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
+-..||||.|+|||+++.. .++.++|+||||+++|||+.|.+||...+. ..+++.+-.+.
T Consensus 198 -----T~TlCGTPeYLAPEii~sk--~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~iY~KI~~~~----- 257 (355)
T KOG0616|consen 198 -----TWTLCGTPEYLAPEIIQSK--GYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQIYEKILEGK----- 257 (355)
T ss_pred -----EEEecCCccccChHHhhcC--CCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HHHHHHHHhCc-----
Confidence 2356799999999999876 788899999999999999999999987765 22444444332
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCC
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADR 328 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~R 328 (373)
...|.-++..+++|+...|+.|-.+|
T Consensus 258 --v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 258 --VKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred --ccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 23345567789999999999999999
No 24
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.8e-45 Score=332.88 Aligned_cols=261 Identities=26% Similarity=0.403 Sum_probs=214.8
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCH---HHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
.|.+.+.||+|+||.||+|+.+ +.+.||+|.+.+...+. +.+.+|+++++.++||||+.++++|+...+.++|+||
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence 4667789999999999999866 78899999998866655 4578899999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+.| +|..++ ..++.++++.+..++.+++.||.|||++ +|.|||+||.|||++.++.+|++|||+++.+....
T Consensus 83 a~g-~L~~il----~~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t 154 (808)
T KOG0597|consen 83 AVG-DLFTIL----EQDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT 154 (808)
T ss_pred hhh-hHHHHH----HhccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence 976 999988 4567899999999999999999999998 99999999999999999999999999999776533
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
...+...|||.|||||...+. .|+..+|.||+||++||+.+|++||..... ...+.......
T Consensus 155 --~vltsikGtPlYmAPElv~e~--pyd~~sDlWslGcilYE~~~G~PPF~a~si-------~~Lv~~I~~d~------- 216 (808)
T KOG0597|consen 155 --SVLTSIKGTPLYMAPELVEEQ--PYDHTSDLWSLGCILYELYVGQPPFYARSI-------TQLVKSILKDP------- 216 (808)
T ss_pred --eeeeeccCcccccCHHHHcCC--CccchhhHHHHHHHHHHHhcCCCCchHHHH-------HHHHHHHhcCC-------
Confidence 234566799999999999875 889999999999999999999999974432 11122221111
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH--HHhcCCCCCCCCCCCcc
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE--MLEGSIDDLQMPPRPFF 353 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~--~L~~~~~~~~~~~~p~~ 353 (373)
...+...+..+.+++...|..||.+|.|..+++. ++++.......|..|-.
T Consensus 217 -v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~~~~~~~~~a~ 269 (808)
T KOG0597|consen 217 -VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKINIAELPAQVAF 269 (808)
T ss_pred -CCCcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhhhhcccccccc
Confidence 1222366888999999999999999999999975 45554443333444333
No 25
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-44 Score=318.81 Aligned_cols=254 Identities=20% Similarity=0.340 Sum_probs=214.4
Q ss_pred ChhHHHHHHhhhhcccCCCCcEEEEEEEE-cCCceeEEEEeccCccCH----HHHHHHHHHhcccCCCceeeEeeEeeeC
Q 048542 58 SYPQIIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLGFCSEG 132 (373)
Q Consensus 58 ~~~~i~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vaiK~~~~~~~~~----~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 132 (373)
+..--..-+|++.+.||+|.||+|-+|.. ..|+.||||.++++.... -.+.+|+++|..|+||||+.+|++|++.
T Consensus 46 hhkhnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENk 125 (668)
T KOG0611|consen 46 HHKHNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK 125 (668)
T ss_pred CcccchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC
Confidence 33344566899999999999999999984 689999999998866543 3478999999999999999999999999
Q ss_pred CeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeecc
Q 048542 133 SKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFG 212 (373)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg 212 (373)
+...+||||..+|.|++++ ...+.+++.++..++.||..|+.|||.+ +++|||||.+|||+|.++++||+|||
T Consensus 126 dKIvivMEYaS~GeLYDYi----Ser~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 126 DKIVIVMEYASGGELYDYI----SERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred ceEEEEEEecCCccHHHHH----HHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccc
Confidence 9999999999999999999 4567899999999999999999999998 99999999999999999999999999
Q ss_pred CcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHh
Q 048542 213 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLN 292 (373)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~ 292 (373)
++..+.... ..+..||++.|.+||+..|. ..-++.+|.||||++||.|+.|..||++.+... +...+.
T Consensus 199 LSNly~~~k---fLqTFCGSPLYASPEIvNG~-PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~--------lvrQIs 266 (668)
T KOG0611|consen 199 LSNLYADKK---FLQTFCGSPLYASPEIVNGT-PYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR--------LVRQIS 266 (668)
T ss_pred hhhhhcccc---HHHHhcCCcccCCccccCCC-CCCCCccchhhHHHHHHHHhhcccccCCchHHH--------HHHHhh
Confidence 998776544 24567899999999999876 344678999999999999999999998765321 223333
Q ss_pred cCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 048542 293 KGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEML 338 (373)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L 338 (373)
.+...+.. -+.+..-||++||..||++|.|++++...+
T Consensus 267 ~GaYrEP~--------~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 267 RGAYREPE--------TPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred cccccCCC--------CCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 33322221 134678899999999999999999997654
No 26
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.6e-44 Score=328.73 Aligned_cols=248 Identities=25% Similarity=0.319 Sum_probs=201.2
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC----HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS----AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.+++.+.||+|+||.||+|+.+ +|..+|+|+++++... .+....|-.+|....+|+||++|..|.+...+|||||
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiME 221 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIME 221 (550)
T ss_pred cchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEE
Confidence 3566789999999999999855 7999999999986553 3667889999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC-
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK- 219 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~- 219 (373)
|++||++..+| .+...+++..+..++.+++-|+..+|+. |++||||||+|+|+|..|++||+|||++.-...
T Consensus 222 ylPGGD~mTLL----~~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 222 YLPGGDMMTLL----MRKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred ecCCccHHHHH----HhcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 99999999998 3457799999999999999999999998 999999999999999999999999999852211
Q ss_pred --------------------CCCce------e------------------eecccCCCCcccccccccccCCcCcccchH
Q 048542 220 --------------------ENDFV------S------------------ISATRGTIGYIAPELISRNFGTVSCKSDVY 255 (373)
Q Consensus 220 --------------------~~~~~------~------------------~~~~~gt~~y~aPE~~~~~~~~~s~~~Dvw 255 (373)
..... . .....|||.|+|||++.+. .|+..+|+|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~k--gY~~~cDwW 372 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGK--GYGKECDWW 372 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcC--CCCccccHH
Confidence 00000 0 0123599999999999986 688999999
Q ss_pred HHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCC-CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCC---H
Q 048542 256 GFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG-DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPS---M 331 (373)
Q Consensus 256 slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~ 331 (373)
|||||+||||.|.+||....+.+ .+..+.... .+.++... .++.+..+||.+|+. ||.+|.. +
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~--------T~rkI~nwr~~l~fP~~~----~~s~eA~DLI~rll~-d~~~RLG~~G~ 439 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQE--------TYRKIVNWRETLKFPEEV----DLSDEAKDLITRLLC-DPENRLGSKGA 439 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHHHhhhccCCCcC----cccHHHHHHHHHHhc-CHHHhcCcccH
Confidence 99999999999999998776543 333333322 22222222 234789999999999 9999986 5
Q ss_pred HHHH
Q 048542 332 TKVL 335 (373)
Q Consensus 332 ~ell 335 (373)
+||-
T Consensus 440 ~EIK 443 (550)
T KOG0605|consen 440 EEIK 443 (550)
T ss_pred HHHh
Confidence 5553
No 27
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3e-43 Score=321.37 Aligned_cols=265 Identities=24% Similarity=0.354 Sum_probs=199.8
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEcC-----------------CceeEEEEeccCccC--HHHHHHHHHHhcccCCCceee
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQT-----------------GGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQ 124 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~~-----------------~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~ 124 (373)
...|.+.++||+|+||.||+|.+++ +..||+|.+...... ..++.+|+.++..++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3467788999999999999997532 236999998764322 357889999999999999999
Q ss_pred EeeEeeeCCeeEEEEeccCcCCccccccCCC---------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeE
Q 048542 125 LLGFCSEGSKRALVYEYMPNGSLDRHVFPKE---------------SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCIL 189 (373)
Q Consensus 125 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~iv 189 (373)
+++++.+....+++|||+++++|.+++.... .....+++..+..++.|++.||.|||+. +++
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence 9999999999999999999999988774321 1123578888999999999999999998 999
Q ss_pred ecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcC--
Q 048542 190 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG-- 267 (373)
Q Consensus 190 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g-- 267 (373)
||||||+|||++.++.+||+|||++................++..|+|||.+.+. .++.++||||||+++|+|+++
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~~~~ 238 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMG--KFTTASDVWAFGVTLWEILMLCK 238 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcC--CCCchhhhHHHHHHHHHHHHccC
Confidence 9999999999999999999999999765433322222234467889999998654 688899999999999999974
Q ss_pred CCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 268 RRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 268 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
..||....... .................. ..+..++..+.+|+.+||+.||.+|||++++.+.|++
T Consensus 239 ~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 239 EQPYGELTDEQ----VIENAGEFFRDQGRQVYL---FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCCcCCHHH----HHHHHHHHhhhccccccc---cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 45555432211 001111111111110000 0112335678999999999999999999999999863
No 28
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.4e-43 Score=316.88 Aligned_cols=246 Identities=19% Similarity=0.274 Sum_probs=198.9
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccCH----HHHHHHHHHhcccCCCceeeEeeEeee----CCeeEEEEecc
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLGFCSE----GSKRALVYEYM 142 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~----~~~~~e~~~l~~l~h~ni~~~~~~~~~----~~~~~lv~e~~ 142 (373)
..||+|++|.||+|... |+.||+|.++...... +.+.+|+.++++++||||+++++++.+ ....+++|||+
T Consensus 26 ~~i~~g~~~~v~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIFN-NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEEC-CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 56999999999999984 8899999998654433 567799999999999999999999866 35688999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++|+|.+++.. ...+++.....++.+++.||.|||+. .+++||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~g~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 105 TRGYLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred CCCcHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 99999999843 35688999999999999999999973 278899999999999999999999999987553321
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
....|+..|+|||.+.+....++.++|||||||++|+|++|..||...... ...............+
T Consensus 178 ----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~-------~~~~~i~~~~~~~~~~-- 244 (283)
T PHA02988 178 ----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK-------EIYDLIINKNNSLKLP-- 244 (283)
T ss_pred ----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhcCCCCCCC--
Confidence 134588999999998764357899999999999999999999999754321 1111222222222221
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
...+..+.+++.+||+.||++|||++++++.|+..
T Consensus 245 ----~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 245 ----LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred ----CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 23456799999999999999999999999999864
No 29
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=6.3e-43 Score=327.98 Aligned_cols=259 Identities=27% Similarity=0.441 Sum_probs=203.0
Q ss_pred HHhhhhcccCCCCcEEEEEEEE------cCCceeEEEEeccCcc--CHHHHHHHHHHhccc-CCCceeeEeeEeeeCCee
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQL------QTGGLIAVKMLENSKF--SAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKR 135 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~------~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~ 135 (373)
..+++.+.||+|+||.||+|.+ .++..||+|+++.... ..+.+.+|+.++..+ +||||+++++++......
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 3577889999999999999963 2456899999875433 235688999999999 899999999999999999
Q ss_pred EEEEeccCcCCccccccCCCC-----------------------------------------------------------
Q 048542 136 ALVYEYMPNGSLDRHVFPKES----------------------------------------------------------- 156 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 156 (373)
++|||||++|+|.+++.....
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 999999999999888743211
Q ss_pred ------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 157 ------------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 157 ------------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
....+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++..........
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 271 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV 271 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCccccc
Confidence 123578889999999999999999998 99999999999999999999999999998654333222
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
......++..|+|||.+.+. .++.++|||||||++|+|++ |..||...... ......+..+.....+
T Consensus 272 ~~~~~~~~~~y~aPE~~~~~--~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~--- 339 (375)
T cd05104 272 VKGNARLPVKWMAPESIFNC--VYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-------SKFYKMIKEGYRMLSP--- 339 (375)
T ss_pred ccCCCCCCcceeChhHhcCC--CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-------HHHHHHHHhCccCCCC---
Confidence 12223456789999998764 78899999999999999998 78887644321 1122233333222111
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
...+.++.+|+.+||+.||++|||+.++++.|+..
T Consensus 340 ---~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 ---ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ---CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 12345789999999999999999999999999863
No 30
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.6e-43 Score=301.81 Aligned_cols=272 Identities=21% Similarity=0.263 Sum_probs=209.0
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCH---HHHHHHHHHhcccCCCceeeEeeEeee--CCeeEEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLGFCSE--GSKRALV 138 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~~lv 138 (373)
..|+..++|++|+||.||+|+++ +++.||+|.++.+.... -.-++|+.+|.+++|||||.+..+... -+..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 35666789999999999999966 78999999998765322 245799999999999999999988743 4579999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
||||+. +|..++... ..++...++..+..|+++|++|||.+ .|+||||||+|+|++..|.+||+|||+|+.++
T Consensus 156 Me~~Eh-DLksl~d~m---~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred HHHHHh-hHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 999976 888777443 36799999999999999999999998 99999999999999999999999999999876
Q ss_pred CCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
... ..++...-|..|.|||.+.+. ..|+...|+||+|||+.||+++++.|.+......-.. ++..+.......
T Consensus 229 sp~--k~~T~lVVTLWYRaPELLLG~-~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~----If~llGtPte~i 301 (419)
T KOG0663|consen 229 SPL--KPYTPLVVTLWYRAPELLLGA-KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDK----IFKLLGTPSEAI 301 (419)
T ss_pred CCc--ccCcceEEEeeecCHHHhcCC-cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHH----HHHHhCCCcccc
Confidence 653 245666789999999999986 6899999999999999999999998876654321111 111111100000
Q ss_pred c--------------C------ccchhhHH-HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCc
Q 048542 299 L--------------Q------NVTEIESM-IARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDDLQMPPRPF 352 (373)
Q Consensus 299 ~--------------~------~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~~~~~~~~p~ 352 (373)
. . ....++.. ++..-.+|+..+|..||.+|.|++|.|+ .+...+.+.|..|.
T Consensus 302 wpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~--h~~F~e~P~p~~P~ 374 (419)
T KOG0663|consen 302 WPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK--HEYFRETPLPIDPS 374 (419)
T ss_pred CCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc--ccccccCCCCCChh
Confidence 0 0 00011111 4567889999999999999999999876 34444444444443
No 31
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=9e-45 Score=341.82 Aligned_cols=255 Identities=27% Similarity=0.452 Sum_probs=216.6
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CC---ceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TG---GLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~---~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
-.+.+.||.|.||.|++|+++ .| ..||||.++.... ...+|+.|..+|.+++||||+++.|+........+|+|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 345588999999999999976 23 4799999997544 44789999999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
||++|+|+.+|..+ .+.+.+.++.-+.+.||.|+.||-+. ++|||||.++|||++.+..+|++|||+++.+.++
T Consensus 711 yMENGsLDsFLR~~---DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 711 YMENGSLDSFLRQN---DGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred hhhCCcHHHHHhhc---CCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccC
Confidence 99999999999543 45688899999999999999999998 9999999999999999999999999999977544
Q ss_pred C-CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 221 N-DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 221 ~-~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
. ......+-.-+.+|.|||.+.-. +++.++||||+|+++||.++ |.+|+.++.+.+ +.+.++.+.++.
T Consensus 785 ~~~~ytt~GGKIPiRWTAPEAIa~R--KFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd--------VIkaIe~gyRLP 854 (996)
T KOG0196|consen 785 PEAAYTTLGGKIPIRWTAPEAIAYR--KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--------VIKAIEQGYRLP 854 (996)
T ss_pred CCccccccCCccceeecChhHhhhc--ccCchhhccccceEEEEecccCCCcccccchHH--------HHHHHHhccCCC
Confidence 3 22222333345799999999654 89999999999999999986 999999887643 566677776655
Q ss_pred cCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 299 LQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 299 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
.+ .+++..|..||..||++|-.+||.+.+|+..|..+..
T Consensus 855 pP------mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 855 PP------MDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred CC------CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 43 4567789999999999999999999999999998654
No 32
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-45 Score=322.75 Aligned_cols=245 Identities=24% Similarity=0.349 Sum_probs=204.4
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
|.-.+.||+|+||.||+|... +++.||||++..... ..+++.+|+.++..++++||.++|+.+..+..++++||||.
T Consensus 15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~ 94 (467)
T KOG0201|consen 15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCG 94 (467)
T ss_pred cccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhc
Confidence 334478999999999999854 889999999986544 44789999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
||++.+.+ ..+..+.+..+..++.++..|+.|||.. +.+|||||+.|||+..+|.+||+|||.+..+......
T Consensus 95 gGsv~~lL----~~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 95 GGSVLDLL----KSGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred Ccchhhhh----ccCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhc
Confidence 99999998 3345557888888999999999999998 9999999999999999999999999999866543322
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
.....||+.|||||++.+. .|+.|+||||||++.+||.+|.+|+....+... .+ .......+
T Consensus 168 --r~tfvGTPfwMAPEVI~~~--~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv--lf------------lIpk~~PP 229 (467)
T KOG0201|consen 168 --RKTFVGTPFWMAPEVIKQS--GYDTKADIWSLGITAIELAKGEPPHSKLHPMRV--LF------------LIPKSAPP 229 (467)
T ss_pred --cccccccccccchhhhccc--cccchhhhhhhhHHHHHHhcCCCCCcccCcceE--EE------------eccCCCCC
Confidence 2567799999999999865 889999999999999999999999876554211 00 00111112
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.+...+++.+++++..||+.||+.|||+.++++
T Consensus 230 ~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 230 RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred ccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 233467888999999999999999999999875
No 33
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-43 Score=350.13 Aligned_cols=267 Identities=27% Similarity=0.467 Sum_probs=215.7
Q ss_pred hHHHHHHhhhhcccCCCCcEEEEEEEEc--CCc----eeEEEEeccCc--cCHHHHHHHHHHhcccCCCceeeEeeEeee
Q 048542 60 PQIIAMTNHFTHKLGQGGFGSVYKGQLQ--TGG----LIAVKMLENSK--FSAEEFINEVSTIGRIHHVNVVQLLGFCSE 131 (373)
Q Consensus 60 ~~i~~~~~~~~~~ig~G~~g~V~~~~~~--~~~----~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~ 131 (373)
+++....-.+.+.||+|+||.||.|... +|. .||||.++... ....+|.+|..+|++++||||++++|+|.+
T Consensus 687 p~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 687 PEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred ccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 3344455566789999999999999855 333 48999988753 344789999999999999999999999999
Q ss_pred CCeeEEEEeccCcCCccccccCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEE
Q 048542 132 GSKRALVYEYMPNGSLDRHVFPKE---SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKV 208 (373)
Q Consensus 132 ~~~~~lv~e~~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl 208 (373)
....++++|||++|+|..++...+ .....++......++.|||+|+.||+++ ++|||||..+|+|+++...+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKI 843 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKI 843 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEE
Confidence 999999999999999999996542 1245688999999999999999999998 9999999999999999999999
Q ss_pred eeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHH
Q 048542 209 SDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWV 287 (373)
Q Consensus 209 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~ 287 (373)
+|||+|+.+.....+.......-+..|||||.+.. +.++.|+||||||+++||+++ |..||+...+.+ +
T Consensus 844 aDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d--~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~--------v 913 (1025)
T KOG1095|consen 844 ADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD--GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE--------V 913 (1025)
T ss_pred cccchhHhhhhchheeccCccccceecCCHHHHhh--cccccccchhhhHHHHHHHHhCCCCCCCCcchHH--------H
Confidence 99999994433322221111234568999999976 589999999999999999998 677777655432 4
Q ss_pred HHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCCCC
Q 048542 288 YDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDDL 345 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~~~ 345 (373)
...+..+.+++.+ ..++..+.++|.+||+.+|++||++..+++.+..+.+.+
T Consensus 914 ~~~~~~ggRL~~P------~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 914 LLDVLEGGRLDPP------SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred HHHHHhCCccCCC------CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 4445555544433 455678899999999999999999999999998876644
No 34
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.3e-43 Score=318.13 Aligned_cols=249 Identities=26% Similarity=0.352 Sum_probs=199.5
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
|+..+.||+|+||.||+|... +++.||+|.+..... ....+.+|+.++..++|+||+++++++.+++..+++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 556789999999999999864 789999999875432 224577899999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++|+|.+.+... ....+++..+..++.|++.||+|||+. +++||||||+|||++.++.++|+|||++.......
T Consensus 82 ~~~g~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 82 MNGGDLKFHIYNM--GNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred cCCCcHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999998776432 234688999999999999999999998 99999999999999999999999999998653322
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
......||..|+|||.+.+. .++.++|||||||++|+|++|+.||........ ...........
T Consensus 157 ---~~~~~~g~~~y~aPE~~~~~--~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~----~~~~~~~~~~~------- 220 (285)
T cd05631 157 ---TVRGRVGTVGYMAPEVINNE--KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK----REEVDRRVKED------- 220 (285)
T ss_pred ---eecCCCCCCCccCHhhhcCC--CCCcccCchhHHHHHHHHHhCCCCCCCCCcchh----HHHHHHHhhcc-------
Confidence 12345689999999999764 788999999999999999999999976543211 01111111111
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCC-----HHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPS-----MTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps-----~~ell~ 336 (373)
....+..++..+.+|+.+||+.||.+||+ ++++++
T Consensus 221 ~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 221 QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 11223345678999999999999999997 788876
No 35
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.5e-43 Score=321.33 Aligned_cols=243 Identities=23% Similarity=0.253 Sum_probs=199.0
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|++.+.||+|+||.||+|..+ +++.||+|++..... ..+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 4667899999999999999876 788999999875332 23567889999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++++|.+++. ....+++..+..++.|++.||+|||++ +++||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 82 YVPGGELFSYLR----NSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred CCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 999999998883 345688999999999999999999998 9999999999999999999999999998765332
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
. ....|++.|+|||.+.+. .++.++|||||||++|+|++|..||...... .....+..+. .
T Consensus 155 ~-----~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~-~--- 215 (291)
T cd05612 155 T-----WTLCGTPEYLAPEVIQSK--GHNKAVDWWALGILIYEMLVGYPPFFDDNPF--------GIYEKILAGK-L--- 215 (291)
T ss_pred c-----ccccCChhhcCHHHHcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCC-c---
Confidence 1 234589999999998765 6788999999999999999999999754321 1222222221 1
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCC-----HHHHHHH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPS-----MTKVLEM 337 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-----~~ell~~ 337 (373)
..+..++..+.+|+.+||+.||.+||+ ++++++.
T Consensus 216 ---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 216 ---EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ---CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 112234567899999999999999995 8887753
No 36
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.4e-42 Score=325.34 Aligned_cols=260 Identities=25% Similarity=0.436 Sum_probs=203.2
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC--HHHHHHHHHHhccc-CCCceeeEeeEeeeCCe
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS--AEEFINEVSTIGRI-HHVNVVQLLGFCSEGSK 134 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~ 134 (373)
...|++.+.||+|+||.||+|... ++..||+|.++..... .+.+.+|+.+++.+ +|+||+++++++.....
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 346778899999999999998743 2347999999764332 35678999999999 89999999999999999
Q ss_pred eEEEEeccCcCCccccccCCC-----------------------------------------------------------
Q 048542 135 RALVYEYMPNGSLDRHVFPKE----------------------------------------------------------- 155 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 155 (373)
.++|||||++|+|.+++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 999999999999988774321
Q ss_pred -------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeec
Q 048542 156 -------SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 228 (373)
Q Consensus 156 -------~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 228 (373)
....++++..+..++.|+++||.|||++ +++||||||+||+++.++.+||+|||++..............
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 1123578889999999999999999998 999999999999999999999999999876543322222223
Q ss_pred ccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhH
Q 048542 229 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIES 307 (373)
Q Consensus 229 ~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
..++..|+|||.+.+. .++.++|||||||++|+|++ |+.||....... ........+.....+ .
T Consensus 274 ~~~~~~y~aPE~~~~~--~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-------~~~~~~~~~~~~~~~------~ 338 (374)
T cd05106 274 ARLPVKWMAPESIFDC--VYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-------KFYKMVKRGYQMSRP------D 338 (374)
T ss_pred CCCccceeCHHHhcCC--CCCccccHHHHHHHHHHHHhCCCCCCccccccH-------HHHHHHHcccCccCC------C
Confidence 3456789999998654 78899999999999999997 999987543221 111222222111111 1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 308 MIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 308 ~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
.++..+.+++.+||+.||.+|||++++++.|+.+
T Consensus 339 ~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 339 FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 2356789999999999999999999999999875
No 37
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=8.6e-43 Score=312.30 Aligned_cols=256 Identities=25% Similarity=0.391 Sum_probs=203.6
Q ss_pred HHHHhhhhcccCCCCcEEEEEEEEc----CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeE
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 136 (373)
....+++.+.||+|+||.||+|.++ .+..||+|.++..... ...+.+|+..++.++||||+++++++..+...+
T Consensus 3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 3456788899999999999999754 3568999998865332 356889999999999999999999999999999
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.++++|||.+..
T Consensus 83 lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 83 IVTEYMSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred EEEEeCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccc
Confidence 999999999999888432 34689999999999999999999998 999999999999999999999999998764
Q ss_pred CCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
....... ......++..|+|||.+.+. .++.++|||||||++|++++ |..||...... .....+..+.
T Consensus 157 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~~~~~ 225 (266)
T cd05064 157 DKSEAIY-TTMSGKSPVLWAAPEAIQYH--HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--------DVIKAVEDGF 225 (266)
T ss_pred ccccchh-cccCCCCceeecCHHHHhhC--CccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCCC
Confidence 3222111 11122356789999998764 78889999999999999775 99998754321 1222233322
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
... .+..++..+.+++.+||+.+|++|||++++++.|+..
T Consensus 226 ~~~------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 226 RLP------APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCC------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 211 1233556789999999999999999999999999764
No 38
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-43 Score=313.44 Aligned_cols=254 Identities=25% Similarity=0.358 Sum_probs=199.2
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---------------CHHHHHHHHHHhcccCCCceeeEee
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---------------SAEEFINEVSTIGRIHHVNVVQLLG 127 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---------------~~~~~~~e~~~l~~l~h~ni~~~~~ 127 (373)
...|++.+.||+|.||.|-+|+.. +++.||||++.+.+. ..++..+|+.+|++++|||||++++
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 346788899999999999999865 789999999965322 2367889999999999999999999
Q ss_pred EeeeC--CeeEEEEeccCcCCccccccCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC
Q 048542 128 FCSEG--SKRALVYEYMPNGSLDRHVFPKESRGQS-LCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF 204 (373)
Q Consensus 128 ~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~-l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~ 204 (373)
+..+. +..|||+|||..|.+...- ...+ +.+.++++++.++..||.|||.+ ||+||||||+|+|++.+|
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p-----~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCP-----PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCC-----CCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 99764 5799999999988874332 2344 99999999999999999999999 999999999999999999
Q ss_pred ceEEeeccCcccCCCCC---CceeeecccCCCCccccccccccc--CCcCcccchHHHHHHHHHHHcCCCCCCCCcCccc
Q 048542 205 IPKVSDFGLAKFHPKEN---DFVSISATRGTIGYIAPELISRNF--GTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSS 279 (373)
Q Consensus 205 ~~kl~Dfg~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~--~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~ 279 (373)
++||+|||.+....... .........|||.|+|||...+.. ...+.+.||||+|++||.|+.|+.||......
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~-- 325 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL-- 325 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH--
Confidence 99999999987552211 111223467999999999886631 23356789999999999999999999755431
Q ss_pred cccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 048542 280 KAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEML 338 (373)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L 338 (373)
..++.+... .+.++.. +++...+++|+.+||+.||++|.+..+|....
T Consensus 326 ------~l~~KIvn~-pL~fP~~----pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 326 ------ELFDKIVND-PLEFPEN----PEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred ------HHHHHHhcC-cccCCCc----ccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 122222221 1122221 24567899999999999999999999987643
No 39
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.7e-42 Score=306.32 Aligned_cols=252 Identities=25% Similarity=0.433 Sum_probs=204.5
Q ss_pred HHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
..+++.+.||+|+||.||++.++++..+|+|.+.......+++.+|+.+++.++||||+++++++......+++|||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 35677789999999999999988888999999887766778899999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|+|.+++... ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||.+........ .
T Consensus 84 ~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-~ 156 (256)
T cd05114 84 GCLLNYLRQR---QGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-T 156 (256)
T ss_pred CcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce-e
Confidence 9999887432 23588999999999999999999998 999999999999999999999999999876533221 1
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
......++..|+|||.+.+. .++.++|+||||+++|+|++ |+.||...... .....+..+.....+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--------~~~~~i~~~~~~~~~--- 223 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFS--KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--------EVVEMISRGFRLYRP--- 223 (256)
T ss_pred ccCCCCCchhhCChhhcccC--ccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHCCCCCCCC---
Confidence 12233456689999998764 67889999999999999999 88888654321 122222222221111
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
...+..+.+++.+||+.+|++|||++++++.|.
T Consensus 224 ---~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 224 ---KLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ---CCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 123457899999999999999999999999873
No 40
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.5e-43 Score=325.35 Aligned_cols=243 Identities=23% Similarity=0.325 Sum_probs=199.3
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
..|++.+.||+|+||.||+|..+ +++.||+|++.... ...+.+.+|+.+++.++||||+++++++.++...+++|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 35678899999999999999976 68899999987543 22356889999999999999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
||+++++|.+.+. ....+++..+..++.|++.||+|||++ +++||||||+|||++.++.+||+|||++.....
T Consensus 98 e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 98 EFVVGGELFTHLR----KAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred cCCCCChHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 9999999998883 345688999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
.. ....||+.|+|||.+.+. .++.++|||||||++|+|++|..||...... .....+..+. ...
T Consensus 171 ~~-----~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~i~~~~-~~~ 234 (329)
T PTZ00263 171 RT-----FTLCGTPEYLAPEVIQSK--GHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF--------RIYEKILAGR-LKF 234 (329)
T ss_pred Cc-----ceecCChhhcCHHHHcCC--CCCCcceeechHHHHHHHHcCCCCCCCCCHH--------HHHHHHhcCC-cCC
Confidence 22 234689999999999765 6788999999999999999999999654321 1222222221 111
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCC-----HHHHHH
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPS-----MTKVLE 336 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-----~~ell~ 336 (373)
+..++..+.+|+.+||+.||.+||+ +++++.
T Consensus 235 ------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 235 ------PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 2234567899999999999999997 677763
No 41
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.9e-43 Score=323.22 Aligned_cols=240 Identities=22% Similarity=0.309 Sum_probs=195.3
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
+.||+|+||.||+|..+ +|+.||+|+++... .....+.+|+.+++.++||||+++++++..+...++||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999865 78899999987532 22356778999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCcee
Q 048542 146 SLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 225 (373)
Q Consensus 146 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 225 (373)
+|.+.+. .+..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........ .
T Consensus 81 ~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--~ 151 (323)
T cd05571 81 ELFFHLS----RERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA--T 151 (323)
T ss_pred cHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC--c
Confidence 9988873 345689999999999999999999998 999999999999999999999999999875322211 1
Q ss_pred eecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchh
Q 048542 226 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305 (373)
Q Consensus 226 ~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (373)
.....||+.|+|||.+.+. .++.++||||+||++|+|++|..||...... ......... .. ..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--------~~~~~~~~~-~~------~~ 214 (323)
T cd05571 152 MKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILME-EI------RF 214 (323)
T ss_pred ccceecCccccChhhhcCC--CCCccccCcccchhhhhhhcCCCCCCCCCHH--------HHHHHHHcC-CC------CC
Confidence 2345699999999999764 6788999999999999999999999754321 111111111 11 12
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCC-----CHHHHHH
Q 048542 306 ESMIARKLCMIGLWCIQVKAADRP-----SMTKVLE 336 (373)
Q Consensus 306 ~~~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~ 336 (373)
+..++..+.+|+.+||+.||++|| ++.++++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 234567899999999999999999 7888875
No 42
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.1e-42 Score=308.78 Aligned_cols=255 Identities=29% Similarity=0.430 Sum_probs=207.7
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
...+++.+.||+|++|.||+|..++++.||+|.++......+++.+|+.+++.++||||+++++++...+..+++|||++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence 34677889999999999999998778889999998776667889999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++.... +..+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++....... .
T Consensus 85 ~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~ 158 (261)
T cd05068 85 YGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDI-Y 158 (261)
T ss_pred CCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCc-c
Confidence 999999884332 45689999999999999999999998 99999999999999999999999999998664221 1
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
........+..|+|||.+.+. .++.++|+||||+++|+|++ |+.||..... ......+........
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~--- 225 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALYN--RFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--------AEVLQQVDQGYRMPC--- 225 (261)
T ss_pred cccCCCcCceeccCccccccC--CCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCC---
Confidence 111222234579999988764 77889999999999999999 8888864322 112222322222111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
+...+..+.+++.+||+.+|.+||+++++++.|+.
T Consensus 226 ---~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 226 ---PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ---CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 12345678999999999999999999999999986
No 43
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.7e-42 Score=311.75 Aligned_cols=257 Identities=25% Similarity=0.434 Sum_probs=205.5
Q ss_pred HHhhhhcccCCCCcEEEEEEEEcC-C-----ceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQT-G-----GLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~~-~-----~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 136 (373)
..+++.+.||+|+||.||+|.... + ..||+|.++..... ..++.+|+.++..++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 356788999999999999998642 2 57999988754332 356889999999999999999999999989999
Q ss_pred EEEeccCcCCccccccCCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC
Q 048542 137 LVYEYMPNGSLDRHVFPKES------------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF 204 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~ 204 (373)
++|||+++++|.+++..... ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 99999999999988854311 125688899999999999999999998 999999999999999999
Q ss_pred ceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccc
Q 048542 205 IPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYF 283 (373)
Q Consensus 205 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~ 283 (373)
.++|+|||++................++..|+|||.+.+. .++.++|||||||++|+|++ |..||......
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~sDv~slG~il~el~~~g~~p~~~~~~~------ 233 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYG--KFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ------ 233 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccC--cCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH------
Confidence 9999999998765433322222334567889999988654 68889999999999999998 99998754321
Q ss_pred hHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 284 PSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
.....+..+.... .+..++..+.+|+.+||+.||.+||+++++++.|++
T Consensus 234 --~~~~~i~~~~~~~------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 234 --EVIEMIRSRQLLP------CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred --HHHHHHHcCCcCC------CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1222333322221 224556789999999999999999999999999986
No 44
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-45 Score=300.97 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=205.2
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEE
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
...|++.+.||+|.|+.|+++.+. +|+.+|+|++..... ..+++.+|+.+.+.|+||||+++.+...+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 346778899999999999999754 899999999875433 4478899999999999999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeee---CCCceEEeeccCccc
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD---HNFIPKVSDFGLAKF 216 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~---~~~~~kl~Dfg~~~~ 216 (373)
|+|.|++|...+.. ...+++..+...+.||++||.|+|.+ +|+|||+||+|+++. ...-+||+|||++..
T Consensus 90 e~m~G~dl~~eIV~----R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 90 DLVTGGELFEDIVA----REFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred ecccchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 99999999776632 24577888899999999999999999 999999999999995 344689999999987
Q ss_pred CCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCC
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGD 296 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
.... ....+..|||.|+|||++... .|+..+|||+.|++||-|+.|..||.+.+... +++.+..+..
T Consensus 163 l~~g---~~~~G~~GtP~fmaPEvvrkd--py~kpvDiW~cGViLfiLL~G~~PF~~~~~~r--------lye~I~~g~y 229 (355)
T KOG0033|consen 163 VNDG---EAWHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILYILLVGYPPFWDEDQHR--------LYEQIKAGAY 229 (355)
T ss_pred eCCc---cccccccCCCcccCHHHhhcC--CCCCcchhhhhhHHHHHHHhCCCCCCCccHHH--------HHHHHhcccc
Confidence 6622 235677899999999999775 89999999999999999999999998754321 3333333321
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
. -......+++++.++|+++||..||.+|+|+.|.++
T Consensus 230 -d--~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 230 -D--YPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred -C--CCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 1 112233456778999999999999999999988764
No 45
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-44 Score=296.01 Aligned_cols=268 Identities=25% Similarity=0.341 Sum_probs=211.9
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEE-EcCCceeEEEEeccCc-cCHHHHHHHHHHhcccCCCceeeEeeEeeeCC-----e
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSK-FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS-----K 134 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-----~ 134 (373)
|...+|++.+++|+|||+.||+++ ..+++.||+|++.... .+.+..++|++..++++|||+++++++...+. .
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 345678899999999999999998 5578999999987665 45578899999999999999999998875433 4
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
.|++++|+..|+|.+.+.....++..+++.+++.|+.++++||.+||+. ..+++||||||.|||+++.+.++|.|||.+
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCc
Confidence 8999999999999999987777788899999999999999999999987 345999999999999999999999999998
Q ss_pred ccCCCCC-------CceeeecccCCCCcccccccccc-cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHH
Q 048542 215 KFHPKEN-------DFVSISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSW 286 (373)
Q Consensus 215 ~~~~~~~-------~~~~~~~~~gt~~y~aPE~~~~~-~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~ 286 (373)
+...-.- ..........|..|.|||.+.-+ ....++++|||||||++|.|+.|..||+..-...+...+
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL--- 253 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL--- 253 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE---
Confidence 7543111 01112233478899999998643 235788999999999999999999999744332211110
Q ss_pred HHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 287 VYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
........+++.. .++..+.+++.+|++.||.+||++.+++..+..+
T Consensus 254 ----Av~n~q~s~P~~~----~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 254 ----AVQNAQISIPNSS----RYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred ----eeeccccccCCCC----CccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 0000111122211 2678999999999999999999999999988764
No 46
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-44 Score=326.04 Aligned_cols=242 Identities=26% Similarity=0.455 Sum_probs=201.6
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCcccc
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRH 150 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~~~ 150 (373)
+-||+|+.|.||+|+.+ ++.||||.++.-+ ..+++.|++|+||||+.+.|+|.....+|||||||..|-|...
T Consensus 130 eWlGSGaQGAVF~Grl~-netVAVKKV~elk------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~V 202 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH-NETVAVKKVRELK------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEV 202 (904)
T ss_pred hhhccCcccceeeeecc-CceehhHHHhhhh------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHH
Confidence 45999999999999988 7889999876432 3578999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeeccc
Q 048542 151 VFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 230 (373)
Q Consensus 151 l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 230 (373)
+ ..+.++......+|..+||.|+.|||.+ .|+|||||.-||||+.+..+||+|||-++...... .....+
T Consensus 203 L----ka~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S---TkMSFa 272 (904)
T KOG4721|consen 203 L----KAGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKS---TKMSFA 272 (904)
T ss_pred H----hccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhhh---hhhhhh
Confidence 9 4567899999999999999999999998 99999999999999999999999999987554332 233567
Q ss_pred CCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHH
Q 048542 231 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIA 310 (373)
Q Consensus 231 gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (373)
||..|||||++.++ ..++|+||||||++|||||||.-||.+-+...- +| ..+.. ......+..++
T Consensus 273 GTVaWMAPEvIrne--PcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI-------Iw---GVGsN---sL~LpvPstcP 337 (904)
T KOG4721|consen 273 GTVAWMAPEVIRNE--PCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI-------IW---GVGSN---SLHLPVPSTCP 337 (904)
T ss_pred hhHhhhCHHHhhcC--CcccccceehhHHHHHHHHhcCCCccccchhee-------EE---eccCC---cccccCcccCc
Confidence 99999999999886 889999999999999999999999875442210 00 11110 00123345667
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCCC
Q 048542 311 RKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344 (373)
Q Consensus 311 ~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~~ 344 (373)
+.++-|+++||+..|.+||++.+++..|.=...+
T Consensus 338 ~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pe 371 (904)
T KOG4721|consen 338 DGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPE 371 (904)
T ss_pred hHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHH
Confidence 7899999999999999999999999998754443
No 47
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.5e-42 Score=308.29 Aligned_cols=255 Identities=25% Similarity=0.422 Sum_probs=207.6
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
...+++.++||+|+||.||+|...++..||+|.+.......+.+.+|+.+++.++|+||+++++.+......+++|||++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 45677889999999999999998888899999988766667889999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++... ....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 85 ~~~L~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05072 85 KGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY- 158 (261)
T ss_pred CCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCce-
Confidence 99999888432 245688889999999999999999998 999999999999999999999999999986543221
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
.......++..|+|||.+.+. .++.++|||||||++|+|++ |..||...... .....+.........
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~-- 226 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINFG--SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--------DVMSALQRGYRMPRM-- 226 (261)
T ss_pred eccCCCccceecCCHHHhccC--CCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--------HHHHHHHcCCCCCCC--
Confidence 112233456789999988654 67889999999999999998 88888643321 122222222211111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
..++..+.+++.+||+.+|++|||++++.+.|+.
T Consensus 227 ----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 227 ----ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ----CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1245678999999999999999999999999985
No 48
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3e-42 Score=310.95 Aligned_cols=258 Identities=26% Similarity=0.431 Sum_probs=206.1
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCee
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKR 135 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 135 (373)
..+|.+.+.||+|+||.||+|... ++..||+|.++..... .+.+.+|+++++.++|+||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 456788899999999999999864 2468999998765443 36789999999999999999999999999999
Q ss_pred EEEEeccCcCCccccccCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCc
Q 048542 136 ALVYEYMPNGSLDRHVFPKE----------SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFI 205 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~----------~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~ 205 (373)
+++|||+++++|.+++.... .....+++..+..++.|++.|+.|||++ +++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCe
Confidence 99999999999999885432 2234578899999999999999999998 9999999999999999999
Q ss_pred eEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccch
Q 048542 206 PKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFP 284 (373)
Q Consensus 206 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~ 284 (373)
++|+|||++................++..|+|||.+.+. .++.++|||||||++|+|++ |..||.......
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~------ 232 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYR--KFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE------ 232 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccC--CcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH------
Confidence 999999998754332221112233457789999998764 78889999999999999998 999986543321
Q ss_pred HHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 285 SWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
.......+..... +..++..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 233 --~~~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 233 --VIECITQGRLLQR------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred --HHHHHHcCCcCCC------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1222222222111 12345678999999999999999999999999863
No 49
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-43 Score=326.79 Aligned_cols=294 Identities=27% Similarity=0.410 Sum_probs=224.3
Q ss_pred EEEEEeecchhhhhHHHHHhhhcCCC-CCc------cChh--HHHHHHhhhhcccCCCCcEEEEEEEEcC--C---ceeE
Q 048542 28 FLVSRRTTLKTIDNIEKFLRNQQSWM-PKR------YSYP--QIIAMTNHFTHKLGQGGFGSVYKGQLQT--G---GLIA 93 (373)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~--~i~~~~~~~~~~ig~G~~g~V~~~~~~~--~---~~va 93 (373)
++.....++.++.++..+........ ... ..-. ++....-.+.++||+|+||.||+|+++. + ..||
T Consensus 111 ~~~~~~~~F~si~~li~~~~~~~~~~~~~~~~L~~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VA 190 (474)
T KOG0194|consen 111 FFFEGLRKFPTISELVNYYKFSKLEITGKNFFLKRPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVA 190 (474)
T ss_pred eEEeccccCCcHHHHHHHHHhcccceeccceeecccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeE
Confidence 34444567777777766655432111 111 1111 2223333456999999999999998652 2 2389
Q ss_pred EEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHH
Q 048542 94 VKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEV 169 (373)
Q Consensus 94 iK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i 169 (373)
+|..+.+. ....++.+|.++|++++||||+++||++......++|||+|.||+|.+++... ...++..+...+
T Consensus 191 vK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~---~~~v~~~ek~~~ 267 (474)
T KOG0194|consen 191 VKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKN---KKSLPTLEKLRF 267 (474)
T ss_pred EEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhC---CCCCCHHHHHHH
Confidence 99988522 23477899999999999999999999999999999999999999999999432 236999999999
Q ss_pred HHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeee-cccCCCCcccccccccccCCc
Q 048542 170 ALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS-ATRGTIGYIAPELISRNFGTV 248 (373)
Q Consensus 170 ~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~ 248 (373)
+.+.|.||+|||++ +++||||-.+|+|++.++.+||+|||+++... .+.... ...-+..|+|||.+.. +.|
T Consensus 268 ~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~---~~~~~~~~~klPirWLAPEtl~~--~~~ 339 (474)
T KOG0194|consen 268 CYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAGS---QYVMKKFLKKLPIRWLAPETLNT--GIF 339 (474)
T ss_pred HHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCCc---ceeeccccccCcceecChhhhcc--Ccc
Confidence 99999999999998 99999999999999999999999999987543 111111 2246679999999976 489
Q ss_pred CcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHH-hcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCC
Q 048542 249 SCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQL-NKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAA 326 (373)
Q Consensus 249 s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 326 (373)
+.++|||||||++||+++ |..||...... .+...+ ..+.....+. ..+..+..++.+||..+|+
T Consensus 340 s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--------~v~~kI~~~~~r~~~~~------~~p~~~~~~~~~c~~~~p~ 405 (474)
T KOG0194|consen 340 SFKTDVWSFGVLLWEIFENGAEPYPGMKNY--------EVKAKIVKNGYRMPIPS------KTPKELAKVMKQCWKKDPE 405 (474)
T ss_pred ccccchhheeeeEEeeeccCCCCCCCCCHH--------HHHHHHHhcCccCCCCC------CCHHHHHHHHHHhccCChh
Confidence 999999999999999998 78888776543 233333 4444444333 2346788899999999999
Q ss_pred CCCCHHHHHHHHhcCCCCCC
Q 048542 327 DRPSMTKVLEMLEGSIDDLQ 346 (373)
Q Consensus 327 ~Rps~~ell~~L~~~~~~~~ 346 (373)
+||||.++.+.|+.+.+...
T Consensus 406 ~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 406 DRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred hccCHHHHHHHHHHHHhccc
Confidence 99999999999998766544
No 50
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=8.9e-43 Score=322.32 Aligned_cols=250 Identities=20% Similarity=0.267 Sum_probs=202.1
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|++.+.||+|+||.||+|... +++.||+|+++.... ....+.+|+.++..++||||+++++++.+....++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 3667899999999999999976 688999999875422 23567889999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++++|.+++. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 82 ~~~g~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 82 YVPGGDFRTLLN----NLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred CCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 999999999883 345688999999999999999999998 999999999999999999999999999975533
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcC-CCccc
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKG-GDLEL 299 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 299 (373)
......||+.|+|||.+.+. .++.++|||||||++|+|++|..||....... ....+... .....
T Consensus 154 ----~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--------~~~~i~~~~~~~~~ 219 (333)
T cd05600 154 ----YANSVVGSPDYMAPEVLRGK--GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE--------TWENLKYWKETLQR 219 (333)
T ss_pred ----ccCCcccCccccChhHhcCC--CCCCccceecchHHHhhhhhCCCCCCCCCHHH--------HHHHHHhccccccC
Confidence 12345699999999999765 78899999999999999999999997543221 11111111 11111
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
+........++..+.+++.+||+.+|.+||+++++++.
T Consensus 220 ~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 220 PVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 11111112456789999999999999999999999864
No 51
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.6e-42 Score=318.81 Aligned_cols=256 Identities=23% Similarity=0.318 Sum_probs=199.9
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
..|++.+.||+|+||.||++... ++..+|+|.+..... ..+++.+|+.+++.++||||+++++++..+...++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 45677899999999999999876 678899999876432 236789999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++++|.+++. ....+++..+..++.|++.||.|||+. .+++||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 85 MDGGSLDQVLK----EAKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (331)
T ss_pred CCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence 99999999883 234688999999999999999999974 269999999999999999999999999987553321
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccch-----------------
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFP----------------- 284 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~----------------- 284 (373)
.....|+..|+|||.+.+. .++.++|||||||++|+|++|+.||...........+.
T Consensus 159 ----~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (331)
T cd06649 159 ----ANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPR 232 (331)
T ss_pred ----cccCCCCcCcCCHhHhcCC--CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcc
Confidence 2234689999999999764 68889999999999999999999996433211000000
Q ss_pred ---------------------HHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 285 ---------------------SWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 285 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
......+......... ...++.++.+|+.+||+.||++|||++++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 233 PRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLP-----NGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccccccccccccchhHHHHHHHHHhCCCcCCC-----CccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000000000 11246789999999999999999999999864
No 52
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-42 Score=323.92 Aligned_cols=239 Identities=24% Similarity=0.359 Sum_probs=203.1
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccC-CCceeeEeeEeeeCCeeEEEE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~ 139 (373)
...+.+.||+|+||+|+++..+ +++.+|||++++.. ...+....|-+++...+ ||.++.++..|...++.|+||
T Consensus 369 ~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvm 448 (694)
T KOG0694|consen 369 DFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVM 448 (694)
T ss_pred ceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEE
Confidence 4567799999999999999976 78899999999854 34577788888888774 999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
||+.||++.... ....+++..+.-++..++.||.|||++ +|++||||.+|||+|.+|.+||+|||+++-.-.
T Consensus 449 ey~~Ggdm~~~~-----~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~ 520 (694)
T KOG0694|consen 449 EYVAGGDLMHHI-----HTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG 520 (694)
T ss_pred EecCCCcEEEEE-----ecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccCC
Confidence 999999965444 346799999999999999999999999 999999999999999999999999999984332
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
.+. .....+||+.|+|||++.+. .|+..+|+|||||++||||.|..||...+.++ +.+.+..
T Consensus 521 ~g~--~TsTfCGTpey~aPEil~e~--~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee--------~FdsI~~------ 582 (694)
T KOG0694|consen 521 QGD--RTSTFCGTPEFLAPEVLTEQ--SYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE--------VFDSIVN------ 582 (694)
T ss_pred CCC--ccccccCChhhcChhhhccC--cccchhhHHHHHHHHHHHHcCCCCCCCCCHHH--------HHHHHhc------
Confidence 221 34678899999999999886 89999999999999999999999999776543 2222222
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCH
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSM 331 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 331 (373)
+...+|..++.+..+++.++|..+|++|..+
T Consensus 583 -d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 583 -DEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -CCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 2245567788999999999999999999976
No 53
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.6e-42 Score=333.32 Aligned_cols=252 Identities=19% Similarity=0.218 Sum_probs=202.2
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-C-CceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-T-GGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~-~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
.|.+.+.||+|+||.||+|... + +..||+|.+...... ...+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3778899999999999999754 3 678888877544332 355778999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++|+|.+++........++++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++........
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 99999887754434456789999999999999999999998 999999999999999999999999999986543322
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
........||+.|+|||.+.+. .++.++|||||||++|+|++|+.||...... ........+....
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~--------~~~~~~~~~~~~~---- 290 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERK--RYSKKADMWSLGVILYELLTLHRPFKGPSQR--------EIMQQVLYGKYDP---- 290 (478)
T ss_pred cccccccCCCccccCHhHhCCC--CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCC----
Confidence 2223345699999999998764 7888999999999999999999999654321 1122222222111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.+..++..+.+++.+||+.||++||++++++.
T Consensus 291 --~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 291 --FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 12234568999999999999999999999864
No 54
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.7e-42 Score=324.07 Aligned_cols=261 Identities=26% Similarity=0.398 Sum_probs=204.7
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCcc--CHHHHHHHHHHhcccC-CCceeeEeeEeeeCCee
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKF--SAEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKR 135 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~ 135 (373)
..+.+.+.||+|+||.||+|... ++..||||+++.... ..+.+.+|+.+++.+. ||||+++++++.+....
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPI 116 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCce
Confidence 35667799999999999999753 234699999975433 2367889999999996 99999999999999999
Q ss_pred EEEEeccCcCCccccccCCCC-----------------------------------------------------------
Q 048542 136 ALVYEYMPNGSLDRHVFPKES----------------------------------------------------------- 156 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 156 (373)
++|||||++|+|.+++.....
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (400)
T cd05105 117 YIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKE 196 (400)
T ss_pred EEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhh
Confidence 999999999999887643210
Q ss_pred ---------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC
Q 048542 157 ---------------------------------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN 203 (373)
Q Consensus 157 ---------------------------------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~ 203 (373)
....+++..+..++.|+++||.|||+. +++||||||+||+++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~~ 273 (400)
T cd05105 197 ASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQG 273 (400)
T ss_pred hhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeCC
Confidence 123478888999999999999999998 99999999999999999
Q ss_pred CceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCcccccc
Q 048542 204 FIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAY 282 (373)
Q Consensus 204 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~ 282 (373)
+.+||+|||++................++..|+|||.+.+. .++.++|||||||++|+|++ |..||......
T Consensus 274 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~----- 346 (400)
T cd05105 274 KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDN--LYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD----- 346 (400)
T ss_pred CEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCC--CCCchhhHHHHHHHHHHHHHCCCCCCcccchh-----
Confidence 99999999999865433322222334467889999998764 67889999999999999997 88888654321
Q ss_pred chHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 283 FPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
.........+..... +..++..+.+++.+||+.||++|||+.++.+.|+.+++
T Consensus 347 --~~~~~~~~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 347 --STFYNKIKSGYRMAK------PDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred --HHHHHHHhcCCCCCC------CccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 112222333222211 12346688999999999999999999999999998654
No 55
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-43 Score=305.55 Aligned_cols=259 Identities=22% Similarity=0.288 Sum_probs=202.5
Q ss_pred hhcccCCCCcEEEEEEEEc-CCceeEEEEecc---CccCHHHHHHHHHHhcccCCCceeeEeeEeee-----CCeeEEEE
Q 048542 69 FTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLEN---SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE-----GSKRALVY 139 (373)
Q Consensus 69 ~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-----~~~~~lv~ 139 (373)
..+.||+|+||.|+.+..+ +|+.||||.+.. .....++..+|+++++.++|+||+.+++++.. -...|+|+
T Consensus 26 ~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~ 105 (359)
T KOG0660|consen 26 LIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVF 105 (359)
T ss_pred ccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEeh
Confidence 3578999999999999865 889999999874 33345788999999999999999999998855 35689999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
|+| +.+|+..+ .++..++...+..+++|++.||.|+|+. +++|||+||+|+|++.+..+||+|||+|+....
T Consensus 106 elM-etDL~~ii----k~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 106 ELM-ETDLHQII----KSQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred hHH-hhHHHHHH----HcCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeeccc
Confidence 999 56888888 4455699999999999999999999998 999999999999999999999999999997754
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc-------chHHHH----
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY-------FPSWVY---- 288 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~-------~~~~~~---- 288 (373)
......++....|-.|.|||++... ..|+.+.||||+||++.||++|++-|.+.+.-..-.. .+....
T Consensus 178 ~~~~~~mTeYVaTRWYRAPElll~~-~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~ 256 (359)
T KOG0660|consen 178 FFEDGFMTEYVATRWYRAPELLLNS-SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIR 256 (359)
T ss_pred cCcccchhcceeeeeecCHHHHhcc-ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhc
Confidence 3333345667789999999998654 6899999999999999999999999987653211000 001111
Q ss_pred -----HHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 289 -----DQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 289 -----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..+..-...........-++.+....+|+.+||..||.+|+|++|.++
T Consensus 257 s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 257 SEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred cHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 111111111111112222355678899999999999999999999986
No 56
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.3e-42 Score=318.31 Aligned_cols=239 Identities=23% Similarity=0.298 Sum_probs=192.0
Q ss_pred cCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 73 ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
||+|+||.||+|... +++.||+|++.... .....+.+|+.+++.++||||+++++++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999876 67899999987532 2335678899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeee
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 227 (373)
.+++. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++........ ...
T Consensus 81 ~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~~ 151 (312)
T cd05585 81 FHHLQ----REGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD--KTN 151 (312)
T ss_pred HHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC--ccc
Confidence 98883 245689999999999999999999998 999999999999999999999999999875432221 123
Q ss_pred cccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhH
Q 048542 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIES 307 (373)
Q Consensus 228 ~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
...||+.|+|||.+.+. .++.++||||+||++|+|++|..||...... . ........ .. ..+.
T Consensus 152 ~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~el~tg~~pf~~~~~~-------~-~~~~~~~~-~~------~~~~ 214 (312)
T cd05585 152 TFCGTPEYLAPELLLGH--GYTKAVDWWTLGVLLYEMLTGLPPFYDENVN-------E-MYRKILQE-PL------RFPD 214 (312)
T ss_pred cccCCcccCCHHHHcCC--CCCCccceechhHHHHHHHhCCCCcCCCCHH-------H-HHHHHHcC-CC------CCCC
Confidence 45699999999999764 7888999999999999999999999754321 1 11122111 11 1223
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 308 MIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 308 ~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
.++..+.+++.+||+.||.+||++..+.+.
T Consensus 215 ~~~~~~~~li~~~L~~dp~~R~~~~~~~e~ 244 (312)
T cd05585 215 GFDRDAKDLLIGLLSRDPTRRLGYNGAQEI 244 (312)
T ss_pred cCCHHHHHHHHHHcCCCHHHcCCCCCHHHH
Confidence 456788999999999999999864433333
No 57
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-43 Score=320.56 Aligned_cols=250 Identities=24% Similarity=0.361 Sum_probs=212.3
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCH---HHHHHHHHHhcccCCCceeeEeeEeeeCCe-eEEEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLGFCSEGSK-RALVY 139 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~-~~lv~ 139 (373)
..|.+.+++|+|+||.++.++++ ++..+++|.+.....+. ....+|+.++++++||||+.+.+.|.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 35778899999999999999866 67799999997654433 467899999999999999999999988887 99999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
+||+||++.+.+... ++.-++++.+..++.|++.|+.|||++ .|+|||||+.||+++.++.+||+|||+|+.+..
T Consensus 84 ~Y~eGg~l~~~i~~~--k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQ--KGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred eecCCCCHHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 999999999988543 367799999999999999999999988 999999999999999999999999999998876
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
.... .....||+.|+.||++.+. .|..|+|+|||||++|||++-+++|...+.. ..+.+.. .+.
T Consensus 159 ~~~~--a~tvvGTp~YmcPEil~d~--pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~-------~Li~ki~-~~~---- 222 (426)
T KOG0589|consen 159 EDSL--ASTVVGTPYYMCPEILSDI--PYNEKSDIWSLGCCLYEMCTLKPAFKASNMS-------ELILKIN-RGL---- 222 (426)
T ss_pred chhh--hheecCCCcccCHHHhCCC--CCCccCcchhhcchHHHHHhcccccCccchH-------HHHHHHh-hcc----
Confidence 5422 3456799999999999886 8999999999999999999999999765532 1122222 211
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
...++..++.++..|+..|++.+|..||++.+++..
T Consensus 223 --~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 --YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred --CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 234556788999999999999999999999999875
No 58
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-43 Score=295.78 Aligned_cols=250 Identities=24% Similarity=0.316 Sum_probs=206.5
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc-----cCH----HHHHHHHHHhccc-CCCceeeEeeEeeeCCe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK-----FSA----EEFINEVSTIGRI-HHVNVVQLLGFCSEGSK 134 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~-----~~~----~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~ 134 (373)
.|+-.+.+|.|..+.|.++.++ +|+.+|+|++.... .+. +.-..|+.+|+++ .||+|+++.++++.+..
T Consensus 18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF 97 (411)
T KOG0599|consen 18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF 97 (411)
T ss_pred hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence 4455678999999999999865 78899999986421 112 4456799999998 59999999999999999
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
.++|+|.|+.|.|.+++ ++...++++....|+.|+.+|+.|||.+ +|||||+||+|||++++.++||+|||.+
T Consensus 98 ~FlVFdl~prGELFDyL----ts~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 98 VFLVFDLMPRGELFDYL----TSKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred hhhhhhhcccchHHHHh----hhheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecccee
Confidence 99999999999999999 5667899999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCceeeecccCCCCcccccccccc----cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHH
Q 048542 215 KFHPKENDFVSISATRGTIGYIAPELISRN----FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQ 290 (373)
Q Consensus 215 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~ 290 (373)
+.+..... ....+|||+|+|||.+... ...|+..+|.|++|+++|.|+.|.+||.-.. ...+...
T Consensus 171 ~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk--------QmlMLR~ 239 (411)
T KOG0599|consen 171 CQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK--------QMLMLRM 239 (411)
T ss_pred eccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH--------HHHHHHH
Confidence 98766553 3567899999999988543 2358889999999999999999999987332 1223333
Q ss_pred HhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 291 LNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
+..|.- .+ ..+-..+++...++|+.+||+.||.+|.|++|.+.
T Consensus 240 ImeGky-qF--~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 240 IMEGKY-QF--RSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHhccc-cc--CCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 333321 11 22334567888999999999999999999999875
No 59
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.2e-42 Score=321.69 Aligned_cols=246 Identities=24% Similarity=0.270 Sum_probs=200.8
Q ss_pred HHHHhhhhcccCCCCcEEEEEEEEcC--CceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeE
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQLQT--GGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~~~~--~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 136 (373)
....|++.+.||+|+||.||+|.++. +..||+|.+.... ...+.+.+|+.+++.++||||+++++++.++...+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 44567888999999999999998553 3589999986532 23356788999999999999999999999999999
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
+||||+++|+|.+++. .+..+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++..
T Consensus 108 lv~Ey~~~g~L~~~i~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~ 180 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLR----RNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKV 180 (340)
T ss_pred EEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCee
Confidence 9999999999998883 345689999999999999999999998 999999999999999999999999999976
Q ss_pred CCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCC
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGD 296 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
..... ....||+.|+|||++.+. .++.++|||||||++|+|++|..||...... .....+..+..
T Consensus 181 ~~~~~-----~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--------~~~~~i~~~~~ 245 (340)
T PTZ00426 181 VDTRT-----YTLCGTPEYIAPEILLNV--GHGKAADWWTLGIFIYEILVGCPPFYANEPL--------LIYQKILEGII 245 (340)
T ss_pred cCCCc-----ceecCChhhcCHHHHhCC--CCCccccccchhhHHHHHhcCCCCCCCCCHH--------HHHHHHhcCCC
Confidence 54321 234699999999998764 6788999999999999999999999754321 12222322221
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCCCC-----CHHHHHHH
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAADRP-----SMTKVLEM 337 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~~ 337 (373)
..+..++..+.+++.+||+.||.+|+ +++++++.
T Consensus 246 -------~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 -------YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -------CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 11223456789999999999999995 89988764
No 60
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.9e-42 Score=308.84 Aligned_cols=249 Identities=32% Similarity=0.558 Sum_probs=194.5
Q ss_pred hhcccCCCCcEEEEEEEEc-----CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 69 FTHKLGQGGFGSVYKGQLQ-----TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 69 ~~~~ig~G~~g~V~~~~~~-----~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
+.+.||.|.||.||+|.++ .+..|+||.++..... .+.+.+|++.+++++||||+++++++......++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4578999999999999876 3567999999654332 47899999999999999999999999988889999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++|+|.+++... ....+++..+..++.|++.||+|||++ +++|+||+++||+++.++.+||+|||++.......
T Consensus 83 ~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 83 CPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp -TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred ccccccccccccc--ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 9999999998543 246789999999999999999999998 99999999999999999999999999998763333
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.............|+|||.+.+. .++.++||||||+++|||++ |+.||..... ......+..+.....+
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~~--~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--------~~~~~~~~~~~~~~~~ 227 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKDG--EYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--------EEIIEKLKQGQRLPIP 227 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHHS--EESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--------HHHHHHHHTTEETTSB
T ss_pred ccccccccccccccccccccccc--ccccccccccccccccccccccccccccccc--------ccccccccccccceec
Confidence 22222334577789999998765 68899999999999999999 6788754422 1122333333332222
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEML 338 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L 338 (373)
..++..+.+++.+||+.||++|||++++++.|
T Consensus 228 ------~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 228 ------DNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ------TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ------cchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 23456789999999999999999999999976
No 61
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1e-41 Score=303.56 Aligned_cols=252 Identities=28% Similarity=0.463 Sum_probs=204.3
Q ss_pred HHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
..|.+.+.||+|+||.||+|..+++..+|+|.++......+++.+|+.+++.++||||+++++++......+++|||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 45678899999999999999887777899999987766678899999999999999999999999988899999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|.+++... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.+....... ..
T Consensus 84 ~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~-~~ 156 (256)
T cd05113 84 GCLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE-YT 156 (256)
T ss_pred CcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCc-ee
Confidence 9999888432 23689999999999999999999998 99999999999999999999999999987654322 11
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
......++..|+|||.+.+. .++.++||||||+++|+|++ |..||...... ........+......
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~--~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~--- 223 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYS--KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--------ETVEKVSQGLRLYRP--- 223 (256)
T ss_pred ecCCCccChhhCCHHHHhcC--cccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHhcCCCCCCC---
Confidence 12233456789999998754 67889999999999999998 88888643321 122222222221111
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
...+..+.+++.+||+.+|.+|||+.++++.|+
T Consensus 224 ---~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 224 ---HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 123568899999999999999999999998774
No 62
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=5.3e-42 Score=306.59 Aligned_cols=255 Identities=30% Similarity=0.446 Sum_probs=205.9
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
..+.+.+.||+|+||.||+|..+ ++..+|+|.+.......+++.+|+.+++.++|+||+++++++..+...+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 34667789999999999999865 68899999988766566788999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++... ....+++..+..++.|+++||+|||++ +++||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~L~~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~- 159 (263)
T cd05052 86 YGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY- 159 (263)
T ss_pred CCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccccee-
Confidence 99999888432 234588999999999999999999998 999999999999999999999999999876543221
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
.......++..|+|||.+.+. .++.++|||||||++|+|++ |..||...... ..............
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~--- 226 (263)
T cd05052 160 TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYELLEKGYRMER--- 226 (263)
T ss_pred eccCCCCCccccCCHHHhccC--CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHCCCCCCC---
Confidence 111122345689999988664 77889999999999999998 88888643321 12222332222211
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
+..++..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 227 ---~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 227 ---PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 223456799999999999999999999999999864
No 63
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=8.4e-42 Score=304.11 Aligned_cols=251 Identities=29% Similarity=0.453 Sum_probs=203.6
Q ss_pred HHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
..+++.+.||+|+||.||+|.++++..+|+|.+.......+++.+|+.+++.++||||+++++++......+++|||+++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 34677899999999999999988778999999887666777889999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++........ .
T Consensus 84 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~-~ 156 (256)
T cd05059 84 GCLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY-T 156 (256)
T ss_pred CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc-c
Confidence 9999988432 23688999999999999999999998 999999999999999999999999999876543221 1
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
......++..|+|||.+.+. .++.++|+||||+++|+|++ |..||...... ..............+
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~--~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~--- 223 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYS--RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--------EVVESVSAGYRLYRP--- 223 (256)
T ss_pred ccCCCCCCccccCHHHhccC--CCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--------HHHHHHHcCCcCCCC---
Confidence 11222345679999998764 67889999999999999998 78888643321 112222222221111
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLEML 338 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L 338 (373)
..++..+.+++.+||+.+|++|||++++++.|
T Consensus 224 ---~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 224 ---KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 22466899999999999999999999999987
No 64
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.1e-42 Score=311.48 Aligned_cols=261 Identities=23% Similarity=0.327 Sum_probs=196.6
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
.|.+.+.||.|+||.||+|..+ ++..||+|.++.... ....+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 85 (288)
T cd07871 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYL 85 (288)
T ss_pred cceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCC
Confidence 4677899999999999999865 788999999875432 2356789999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++ +|.+++.. .+..+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++........
T Consensus 86 ~~-~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 86 DS-DLKQYLDN---CGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred Cc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 64 88877732 234578899999999999999999998 999999999999999999999999999875432221
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc-------hHHHHHHHhcC-
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF-------PSWVYDQLNKG- 294 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~-------~~~~~~~~~~~- 294 (373)
......+++.|+|||.+.+. ..++.++||||+||++|+|++|+.||............ +...+......
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 159 --TYSNEVVTLWYRPPDVLLGS-TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred --cccCceecccccChHHhcCC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccch
Confidence 12334588999999988653 35788999999999999999999999754432110000 00000000000
Q ss_pred --CCcccCc-----cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 295 --GDLELQN-----VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 295 --~~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.....+. .......++.++.+|+.+||+.||.+|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 00111224567899999999999999999999985
No 65
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-43 Score=290.29 Aligned_cols=245 Identities=23% Similarity=0.365 Sum_probs=207.2
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
..++.+.||+|-||.||.|+.+ ++..||+|++.++.. ...++.+|+++-..|+||||+++|++|.+....|+++|
T Consensus 23 dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilE 102 (281)
T KOG0580|consen 23 DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILE 102 (281)
T ss_pred hccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEE
Confidence 3467899999999999999855 778999999987543 23678899999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|.++|++...+... ....+.+.....++.|+|.|+.|+|.. +++||||||+|+|++..+.+|++|||.+......
T Consensus 103 ya~~gel~k~L~~~--~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~ 177 (281)
T KOG0580|consen 103 YAPRGELYKDLQEG--RMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSN 177 (281)
T ss_pred ecCCchHHHHHHhc--ccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecCCC
Confidence 99999999998532 356688888999999999999999998 9999999999999999999999999998765433
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.+ ...+||..|.|||...+. ..+..+|+|++|++.||++.|.+||..... ...++.+.+...
T Consensus 178 kR----~tlcgt~dyl~pEmv~~~--~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--------~etYkrI~k~~~---- 239 (281)
T KOG0580|consen 178 KR----KTLCGTLDYLPPEMVEGR--GHDKFVDLWSLGVLCYEFLVGLPPFESQSH--------SETYKRIRKVDL---- 239 (281)
T ss_pred Cc----eeeecccccCCHhhcCCC--CccchhhHHHHHHHHHHHHhcCCchhhhhh--------HHHHHHHHHccc----
Confidence 22 356799999999999876 678899999999999999999999986552 223333433221
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.++..++..+.+++.+|+..+|.+|.+..|++.
T Consensus 240 ---~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 240 ---KFPSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred ---cCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 223556778999999999999999999999876
No 66
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.7e-42 Score=316.25 Aligned_cols=259 Identities=24% Similarity=0.324 Sum_probs=195.5
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
..|++.+.||+|+||.||+|..+ +++.||+|++..... ....+.+|+.+++.++||||+++++++.++...++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 35778899999999999999976 788999999875432 235678899999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+. ++|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 85 VH-TDLCQYMDK---HPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred CC-cCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 95 577666632 235588899999999999999999998 99999999999999999999999999987543222
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcC-------
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKG------- 294 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------- 294 (373)
. ......+++.|+|||++.+. ..++.++||||+||++|+|++|..||......... +. .........
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~--~~-~~~~~~~~~~~~~~~~ 231 (303)
T cd07869 158 H--TYSNEVVTLWYRPPDVLLGS-TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQ--LE-RIFLVLGTPNEDTWPG 231 (303)
T ss_pred c--cCCCCcccCCCCChHHHcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHH--HH-HHHHHhCCCChhhccc
Confidence 1 12345688999999988653 35788899999999999999999999754321100 00 000000000
Q ss_pred ------CC---cccCccchhhH-----HHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 295 ------GD---LELQNVTEIES-----MIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 295 ------~~---~~~~~~~~~~~-----~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.. ........... .++..+.+|+.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 232 VHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00 00000000000 12356889999999999999999999986
No 67
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.1e-41 Score=305.07 Aligned_cols=255 Identities=27% Similarity=0.429 Sum_probs=204.3
Q ss_pred HHhhhhcccCCCCcEEEEEEEEcC----CceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQT----GGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~~----~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 138 (373)
..|++.+.||+|+||.||+|.++. ...||+|.++..... ..++.+|+.+++.++||||+++++++......+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 456778999999999999998752 357999988764333 35788999999999999999999999999999999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
|||+++++|.+++... ...+++..+..++.|++.|++|||++ +++|+||||+||+++.++.++|+|||++....
T Consensus 84 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 84 TEYMENGSLDKFLREN---DGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEcCCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 9999999999988432 24689999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCc
Q 048542 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 297 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (373)
............++..|+|||.+.+. .++.++||||||+++|+|++ |..||...... ............
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~--~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~ 227 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYR--KFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--------DVIKAVEDGYRL 227 (266)
T ss_pred ccccceeccCCCCCccccChhhhccC--CCccccchHHHHHHHHHHHccCCCCCCCCCHH--------HHHHHHHcCCCC
Confidence 32222222233456789999998764 67889999999999999998 98888643321 122222222221
Q ss_pred ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 298 ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
.. +..++..+.+++.+||+.+|++||+++++++.|+.+
T Consensus 228 ~~------~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 PP------PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CC------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11 123456789999999999999999999999999864
No 68
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.4e-42 Score=317.94 Aligned_cols=240 Identities=23% Similarity=0.319 Sum_probs=193.9
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
+.||+|+||.||++..+ +|..||+|+++... .....+.+|+.+++.++||||+++++++......++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46899999999999865 78899999987532 22356778999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCcee
Q 048542 146 SLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 225 (373)
Q Consensus 146 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 225 (373)
+|..++. ....+++..+..++.|++.||+|||++ +++||||||+|||++.++.+||+|||++....... ..
T Consensus 81 ~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~ 151 (323)
T cd05595 81 ELFFHLS----RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--AT 151 (323)
T ss_pred cHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC--Cc
Confidence 9987773 345689999999999999999999998 99999999999999999999999999987432221 11
Q ss_pred eecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchh
Q 048542 226 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305 (373)
Q Consensus 226 ~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (373)
.....||+.|+|||.+.+. .++.++|||||||++|+|++|+.||....... ......... . ..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~--------~~~~~~~~~-~------~~ 214 (323)
T cd05595 152 MKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--------LFELILMEE-I------RF 214 (323)
T ss_pred cccccCCcCcCCcccccCC--CCCchhchhhhHHHHHHHHhCCCCCCCCCHHH--------HHHHHhcCC-C------CC
Confidence 2345699999999998764 77889999999999999999999997543211 111111111 1 12
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCC-----CHHHHHH
Q 048542 306 ESMIARKLCMIGLWCIQVKAADRP-----SMTKVLE 336 (373)
Q Consensus 306 ~~~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~ 336 (373)
+..++..+.+++.+||+.||++|| ++.++++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 234567889999999999999998 7888765
No 69
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.2e-42 Score=313.06 Aligned_cols=261 Identities=21% Similarity=0.290 Sum_probs=198.7
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
.|++.+.||+|+||.||+|+.+ +++.+|+|++..... ..+.+.+|+.+++.++||||+++++++..+...++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 4677899999999999999976 678899999875432 236678999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
++++++..+. .....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~----~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 82 VEKNMLELLE----EMPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred CCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 9887765443 2234688999999999999999999998 99999999999999999999999999998654322
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc-------chHHHHHHHhcC
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY-------FPSWVYDQLNKG 294 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~-------~~~~~~~~~~~~ 294 (373)
. .......|+..|+|||.+.+. .++.++||||+||++|+|++|+.||........... .+..........
T Consensus 155 ~-~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07848 155 N-ANYTEYVATRWYRSPELLLGA--PYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSN 231 (287)
T ss_pred c-ccccccccccccCCcHHHcCC--CCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhcc
Confidence 1 112234689999999998764 678899999999999999999999976432110000 000000000000
Q ss_pred C---CcccCc---c----chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 295 G---DLELQN---V----TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 295 ~---~~~~~~---~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
. ....+. . ......++..+.+|+.+||+.||++|||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 232 PRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred chhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 000000 0 1112235678999999999999999999999885
No 70
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.7e-42 Score=319.76 Aligned_cols=262 Identities=19% Similarity=0.252 Sum_probs=194.1
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc---cCHHHHHHHHHHhcccCCCceeeEeeEeeeC-----CeeEE
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK---FSAEEFINEVSTIGRIHHVNVVQLLGFCSEG-----SKRAL 137 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-----~~~~l 137 (373)
|++.+.||+|+||.||+|..+ ++..||||.+.... ....++.+|+.+++.++||||+++++++... ...|+
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 677899999999999999865 78899999987532 2235688999999999999999999987543 24799
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
|||||. ++|.+++. ....+++..+..++.|+++||.|||+. +++||||||+|||++.++.+||+|||++...
T Consensus 82 v~e~~~-~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 82 VFELME-SDLHQVIK----ANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEecCC-CCHHHHHH----hcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 999995 68887773 345689999999999999999999998 9999999999999999999999999999754
Q ss_pred CCCCC-ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc-------chHHHHH
Q 048542 218 PKEND-FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY-------FPSWVYD 289 (373)
Q Consensus 218 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~-------~~~~~~~ 289 (373)
..... ........||..|+|||.+.+....++.++|||||||++|+|++|+.||........... .+.....
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 32221 112234568999999999865334778899999999999999999999975432110000 0000000
Q ss_pred HHh---------cCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 290 QLN---------KGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 290 ~~~---------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.+. ................++..+.+++.+||+.||++|||++|+++
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000 00000000000111123456889999999999999999999986
No 71
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=9.7e-42 Score=313.13 Aligned_cols=257 Identities=24% Similarity=0.387 Sum_probs=202.3
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCc----eeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeE
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGG----LIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 136 (373)
...|+..+.||+|+||.||+|.+. ++. .||+|.++.... ...++.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 345777899999999999999864 333 389999875432 236788999999999999999999998764 577
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
+++||+++|+|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 85 ~v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 85 LITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccc
Confidence 999999999999988432 34588899999999999999999998 999999999999999999999999999987
Q ss_pred CCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
..............++..|+|||.+.+. .++.++||||||+++|+|++ |..||...... ........+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~--~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~ 228 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHR--IYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--------EISSILEKGE 228 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccC--CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHhCCC
Confidence 6543332222333456789999998764 78899999999999999997 89888643221 1222223322
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
....+ ..++.++.+++.+||+.+|.+|||+.+++..|....+
T Consensus 229 ~~~~~------~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 229 RLPQP------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CCCCC------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 22211 1234578999999999999999999999999987654
No 72
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.2e-41 Score=314.53 Aligned_cols=257 Identities=23% Similarity=0.325 Sum_probs=198.8
Q ss_pred HHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEE
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
....|++.++||+|+||.||++.+. ++..+|+|.+..... ....+.+|+++++.++||||+++++++.++...++||
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 3457888899999999999999876 678899998876432 2367889999999999999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
||+++++|.+++. ....+++..+..++.+++.||.|||+. .+++|+||||+||+++.++.+||+|||++.....
T Consensus 83 e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 83 EHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred ecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 9999999999883 234688999999999999999999963 2799999999999999999999999999875432
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc----------------
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF---------------- 283 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~---------------- 283 (373)
.. .....|+..|+|||.+.+. .++.++|||||||++|+|++|+.||...........+
T Consensus 157 ~~----~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (333)
T cd06650 157 SM----ANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPR 230 (333)
T ss_pred hc----cccCCCCccccCHHHhcCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcc
Confidence 21 1234689999999998764 6788999999999999999999998754321100000
Q ss_pred -----------------h---HHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 284 -----------------P---SWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 284 -----------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
. ................ ...++.++.+|+.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 231 PRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLP-----SGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred cCCccchhhhhcccccccccHHHHHHHHhcCCCccCC-----CCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 0 0000000000000000 0113467899999999999999999999964
No 73
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-41 Score=318.55 Aligned_cols=256 Identities=21% Similarity=0.203 Sum_probs=194.3
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
..|.+.+.||+|+||.||+|... +++.||+|.... ..+.+|+.+++.++||||+++++++......++++|++.
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~ 166 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK 166 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC
Confidence 45888899999999999999865 788999996542 356789999999999999999999999999999999994
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
++|..++. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 167 -~~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~- 237 (391)
T PHA03212 167 -TDLYCYLA----AKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA- 237 (391)
T ss_pred -CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccccc-
Confidence 67877763 234688999999999999999999998 999999999999999999999999999875332211
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHH-------------
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQ------------- 290 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~------------- 290 (373)
.......||+.|+|||++.+. .++.++|||||||++|+|++|..||...................
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~ 315 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARD--PYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI 315 (391)
T ss_pred cccccccCccCCCChhhhcCC--CCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCc
Confidence 112345699999999998764 78899999999999999999998876433211100000000000
Q ss_pred ------------HhcCCCcccCcc--chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 291 ------------LNKGGDLELQNV--TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 291 ------------~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
............ ......++.++.+|+.+||+.||.+|||++|+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 316 DAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred chhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000000 0111234668999999999999999999999985
No 74
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5e-42 Score=331.65 Aligned_cols=255 Identities=23% Similarity=0.282 Sum_probs=203.3
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeCC------
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEGS------ 133 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~------ 133 (373)
..+|.+.+.||+|+||+||+|... +++.||||++.....+ ...+.+|+..+..++|+|++++++.+....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~ 110 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPEN 110 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCccc
Confidence 347888899999999999999854 7899999998765443 256778999999999999999987764322
Q ss_pred --eeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeec
Q 048542 134 --KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211 (373)
Q Consensus 134 --~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Df 211 (373)
..++||||+++|+|.+++.........+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+||
T Consensus 111 ~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 111 VLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred ceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEec
Confidence 36799999999999998865544566799999999999999999999998 9999999999999999999999999
Q ss_pred cCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHH
Q 048542 212 GLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQL 291 (373)
Q Consensus 212 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~ 291 (373)
|+++...............||+.|+|||.+.+. .++.++|||||||++|+|++|+.||...... . .....
T Consensus 188 Gls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~--~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~-------~-~~~~~ 257 (496)
T PTZ00283 188 GFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRK--PYSKKADMFSLGVLLYELLTLKRPFDGENME-------E-VMHKT 257 (496)
T ss_pred ccCeeccccccccccccccCCcceeCHHHhCCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-------H-HHHHH
Confidence 999765432222222345699999999999764 7889999999999999999999999754321 1 12222
Q ss_pred hcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 292 NKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
..+.... .+..++..+.+++.+||+.||.+||++.++++.
T Consensus 258 ~~~~~~~------~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 258 LAGRYDP------LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred hcCCCCC------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 2221111 223456789999999999999999999999763
No 75
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.4e-41 Score=301.93 Aligned_cols=253 Identities=30% Similarity=0.471 Sum_probs=207.6
Q ss_pred HHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
..|.+.++||.|+||.||+|...++..+++|.+..... ...++.+|+.+++.++|+||+++++++.+....+++|||++
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELME 85 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecc
Confidence 45788899999999999999988889999999887655 45778899999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++... .+..+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.+||+|||.+........
T Consensus 86 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~- 159 (261)
T cd05148 86 KGSLLAFLRSP--EGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY- 159 (261)
T ss_pred cCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCccc-
Confidence 99999998543 245689999999999999999999998 999999999999999999999999999976543221
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
......++..|+|||.+.+. .++.++|+||||+++|+|++ |..||...... ........+.....
T Consensus 160 -~~~~~~~~~~~~~PE~~~~~--~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~--- 225 (261)
T cd05148 160 -LSSDKKIPYKWTAPEAASHG--TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--------EVYDQITAGYRMPC--- 225 (261)
T ss_pred -cccCCCCceEecCHHHHccC--CCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--------HHHHHHHhCCcCCC---
Confidence 11233466789999988654 67889999999999999998 78888654321 12222222222211
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
+..++..+.+++.+||+.||++|||++++++.|++
T Consensus 226 ---~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 226 ---PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred ---CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 12345678999999999999999999999999986
No 76
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.7e-41 Score=301.53 Aligned_cols=256 Identities=27% Similarity=0.433 Sum_probs=208.4
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
|...+|++.++||+|+||.||+|..++++.+|+|.+.......+++.+|+.+++.++|+||+++++++. ....+++|||
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred cchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 455678899999999999999999888899999999887777789999999999999999999999874 4568999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++++|.+++... .+..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05067 82 MENGSLVDFLKTP--EGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCC
Confidence 9999999887432 245688999999999999999999998 99999999999999999999999999987654222
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
. .......++..|+|||.+.+. .++.++|+||||+++|+|++ |+.||...... .....+..+.....
T Consensus 157 ~-~~~~~~~~~~~y~~pe~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~- 224 (260)
T cd05067 157 Y-TAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--------EVIQNLERGYRMPR- 224 (260)
T ss_pred c-ccccCCcccccccCHHHhccC--CcCcccchHHHHHHHHHHHhCCCCCCCCCChH--------HHHHHHHcCCCCCC-
Confidence 1 111233466789999988654 67889999999999999998 99998654321 12222332222221
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
+...+..+.+++.+||+.+|++|||++++++.|+.
T Consensus 225 -----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 225 -----PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 12235679999999999999999999999999975
No 77
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.7e-42 Score=317.28 Aligned_cols=241 Identities=22% Similarity=0.319 Sum_probs=195.0
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
+.||+|+||.||++..+ +++.||+|++.... .....+.+|+.+++.++||||+++++++......++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999865 68899999987532 22356788999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCcee
Q 048542 146 SLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 225 (373)
Q Consensus 146 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 225 (373)
+|.+.+. ....+++..+..++.|++.||+|||++ +++||||||+|||++.++.+||+|||++....... ..
T Consensus 81 ~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~ 151 (328)
T cd05593 81 ELFFHLS----RERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--AT 151 (328)
T ss_pred CHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--cc
Confidence 9988773 345689999999999999999999998 99999999999999999999999999987532211 12
Q ss_pred eecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchh
Q 048542 226 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305 (373)
Q Consensus 226 ~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (373)
.....||+.|+|||.+.+. .++.++|||||||++|+|++|+.||....... ........ . ...
T Consensus 152 ~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~elltG~~Pf~~~~~~~--------~~~~~~~~-~------~~~ 214 (328)
T cd05593 152 MKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--------LFELILME-D------IKF 214 (328)
T ss_pred cccccCCcCccChhhhcCC--CCCccCCccccchHHHHHhhCCCCCCCCCHHH--------HHHHhccC-C------ccC
Confidence 2345699999999998764 67889999999999999999999997543211 11111111 1 112
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCC-----CHHHHHHH
Q 048542 306 ESMIARKLCMIGLWCIQVKAADRP-----SMTKVLEM 337 (373)
Q Consensus 306 ~~~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~~ 337 (373)
+..++..+.+++.+||+.||++|| ++.++++.
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 215 PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 234567889999999999999997 88988753
No 78
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=5e-42 Score=309.63 Aligned_cols=246 Identities=23% Similarity=0.316 Sum_probs=196.2
Q ss_pred cCCCCcEEEEEEEEc-CCceeEEEEeccCccC----HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS----AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 73 ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
||+|+||+||++... +++.+|+|.+...... .+.+..|+.+++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999865 7889999998754322 24567899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeee
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 227 (373)
.+.+......+..+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++........ ...
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--ccc
Confidence 877754444456799999999999999999999998 999999999999999999999999999876543321 123
Q ss_pred cccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhH
Q 048542 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIES 307 (373)
Q Consensus 228 ~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
...||+.|+|||.+.+. .++.++|+|||||++|+|++|+.||......... ......... .....+.
T Consensus 156 ~~~g~~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~----~~~~~~~~~-------~~~~~~~ 222 (280)
T cd05608 156 GYAGTPGFMAPELLQGE--EYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN----KELKQRILN-------DSVTYPD 222 (280)
T ss_pred ccCCCcCccCHHHhcCC--CCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH----HHHHHhhcc-------cCCCCcc
Confidence 44689999999999764 7788999999999999999999999754432110 001111110 0112223
Q ss_pred HHHHHHHHHHHhhcCCCCCCCC-----CHHHHHH
Q 048542 308 MIARKLCMIGLWCIQVKAADRP-----SMTKVLE 336 (373)
Q Consensus 308 ~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~ 336 (373)
.++..+.+++.+||+.||++|| +++++++
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 223 KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 4567899999999999999999 6777775
No 79
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=9.5e-42 Score=298.31 Aligned_cols=262 Identities=24% Similarity=0.325 Sum_probs=201.4
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCc-eeeEeeEeeeCC------
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVN-VVQLLGFCSEGS------ 133 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~n-i~~~~~~~~~~~------ 133 (373)
..|...++||+|+||+||+|+.+ +|+.||+|.++.... ......+|+.+++.++|+| |+.+++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 34566678999999999999965 788999999987654 3356789999999999999 999999998776
Q ss_pred eeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccC
Q 048542 134 KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGL 213 (373)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~ 213 (373)
..++|+||+ .-+|..++.........++...+..++.|++.||+|||++ +|+||||||.|||++.+|.+||+|||+
T Consensus 91 ~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence 889999999 4588888854433224577788999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhc
Q 048542 214 AKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293 (373)
Q Consensus 214 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 293 (373)
|+...-+.. .++...+|..|.|||++.+. ..|+...|+||+||++.||++++.-|.+......- .-+...+..
T Consensus 167 Ara~~ip~~--~yt~evvTlWYRaPEvLlGs-~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql----~~If~~lGt 239 (323)
T KOG0594|consen 167 ARAFSIPMR--TYTPEVVTLWYRAPEVLLGS-TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQL----FRIFRLLGT 239 (323)
T ss_pred HHHhcCCcc--cccccEEEeeccCHHHhcCC-CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHH----HHHHHHcCC
Confidence 986543322 24455688999999999887 46899999999999999999999888765532100 001111110
Q ss_pred C-------------CCcccCc---cchhh---HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 294 G-------------GDLELQN---VTEIE---SMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 294 ~-------------~~~~~~~---~~~~~---~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
. ....+.. ..... +....+..+++.+|++.+|.+|.|++.+++.
T Consensus 240 P~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 240 PNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 0 0001110 11111 1122478999999999999999999999874
No 80
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=9e-42 Score=309.24 Aligned_cols=261 Identities=24% Similarity=0.404 Sum_probs=205.5
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeE
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 136 (373)
...+.+.+.||+|+||.||++... ++..+|+|.+..... ..+.+.+|+.++++++||||+++++++......+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 345677899999999999999742 345689998875432 2467899999999999999999999999999999
Q ss_pred EEEeccCcCCccccccCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceE
Q 048542 137 LVYEYMPNGSLDRHVFPKE---------SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPK 207 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~k 207 (373)
++|||+++++|.+++.... .+...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 9999999999988874322 1234589999999999999999999998 999999999999999999999
Q ss_pred EeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHH
Q 048542 208 VSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSW 286 (373)
Q Consensus 208 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~ 286 (373)
|+|||++................++..|+|||.+.+. .++.++|+|||||++|+|++ |..||...... .
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--------~ 230 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR--KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--------E 230 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------H
Confidence 9999999765433222222233457789999998764 77889999999999999998 88887644321 1
Q ss_pred HHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 287 VYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
.......+...... ..++..+.+|+.+||+.||.+|||++++++.|+.+.+
T Consensus 231 ~~~~i~~~~~~~~~------~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 231 VIECITQGRVLQRP------RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HHHHHHcCCcCCCC------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 22223332222111 2235678999999999999999999999999988654
No 81
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.1e-41 Score=317.40 Aligned_cols=248 Identities=26% Similarity=0.379 Sum_probs=194.1
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
..+++.++||+|+||.||+|.+. +++.||||++...... ...+.+|+.+++.++|+||+++++++......++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 34567789999999999999865 6889999998654332 36788999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++++|.+.. ...+..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++.......
T Consensus 154 ~~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 154 MDGGSLEGTH--------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred CCCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 9999985432 345677889999999999999998 99999999999999999999999999997654322
Q ss_pred CceeeecccCCCCcccccccccc---cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 222 DFVSISATRGTIGYIAPELISRN---FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
. ......||..|+|||.+... ....+.++|||||||++|+|++|+.||........ .. ..........
T Consensus 223 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~----~~-~~~~~~~~~~-- 293 (353)
T PLN00034 223 D--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDW----AS-LMCAICMSQP-- 293 (353)
T ss_pred c--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccH----HH-HHHHHhccCC--
Confidence 1 12345689999999987432 12345689999999999999999999974332211 00 0111111111
Q ss_pred cCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 299 LQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 299 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...+..++..+.+|+.+||+.||++|||++|+++
T Consensus 294 ----~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 294 ----PEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred ----CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1122345678999999999999999999999987
No 82
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.6e-41 Score=301.64 Aligned_cols=254 Identities=28% Similarity=0.435 Sum_probs=205.2
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
...|++.++||+|+||.||+|..+++..+|+|.+.......+++.+|+.++++++|+|++++++++. ....+++|||++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 4567888999999999999999888889999999877777788999999999999999999999875 456899999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++... ....+++..+..++.+++.||+|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05070 84 KGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccc-
Confidence 99999988432 234588999999999999999999998 999999999999999999999999999976543221
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
.......++..|+|||.+.+. .++.++|+||||+++|+|++ |..||...... .....+.......
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~---- 223 (260)
T cd05070 158 TARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--------EVLEQVERGYRMP---- 223 (260)
T ss_pred ccccCCCCCccccChHHHhcC--CCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCCC----
Confidence 111223356689999988654 67889999999999999999 88888643321 1222222222211
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
.+...+..+.+++.+||+.+|++|||+.++.+.|+.
T Consensus 224 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 224 --CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 122345679999999999999999999999999875
No 83
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.1e-41 Score=315.03 Aligned_cols=261 Identities=29% Similarity=0.459 Sum_probs=203.0
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC--HHHHHHHHHHhccc-CCCceeeEeeEeee-CCe
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS--AEEFINEVSTIGRI-HHVNVVQLLGFCSE-GSK 134 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l-~h~ni~~~~~~~~~-~~~ 134 (373)
.+|++.+.||+|+||.||+|... +++.||+|+++..... ...+..|+.++..+ +|+||+++++++.. +..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 46888999999999999999632 3468999998754322 24677899999999 89999999998754 467
Q ss_pred eEEEEeccCcCCccccccCCCCC---------------------------------------------------------
Q 048542 135 RALVYEYMPNGSLDRHVFPKESR--------------------------------------------------------- 157 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------------- 157 (373)
.+++|||+++++|.+++......
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 88999999999998887432110
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeecccCCCCccc
Q 048542 158 GQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIA 237 (373)
Q Consensus 158 ~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a 237 (373)
...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.++|+|||++................++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 23688999999999999999999998 999999999999999999999999999986543322222223446678999
Q ss_pred ccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHH
Q 048542 238 PELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMI 316 (373)
Q Consensus 238 PE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 316 (373)
||.+.+. .++.++|||||||++|+|++ |..||......+ .....+..+..... +...+.++.++
T Consensus 244 PE~~~~~--~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-------~~~~~~~~~~~~~~------~~~~~~~~~~l 308 (337)
T cd05054 244 PESIFDK--VYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-------EFCRRLKEGTRMRA------PEYATPEIYSI 308 (337)
T ss_pred cHHhcCC--CCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-------HHHHHHhccCCCCC------CccCCHHHHHH
Confidence 9988764 78889999999999999997 998886533211 12222222222211 12335678999
Q ss_pred HHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 317 GLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 317 i~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
+.+||+.+|++||+++|+++.|+.++.
T Consensus 309 ~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 309 MLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999997643
No 84
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.4e-41 Score=302.92 Aligned_cols=258 Identities=21% Similarity=0.336 Sum_probs=206.7
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|++.+.||+|+||.||+|..+ +++.||||.+..... ....+.+|+.+++.++||||+++++++......++++|
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEE
Confidence 4677899999999999999865 788999998764221 22567899999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++++|.+++.........+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~ 159 (267)
T cd08228 83 LADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred ecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccch
Confidence 9999999888754444455688999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.. ......++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||....... .. ....+........
T Consensus 160 ~~--~~~~~~~~~~~~aPE~~~~~--~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~-----~~-~~~~~~~~~~~~~- 228 (267)
T cd08228 160 TT--AAHSLVGTPYYMSPERIHEN--GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-----FS-LCQKIEQCDYPPL- 228 (267)
T ss_pred hH--HHhcCCCCccccChhhhccC--CCCchhhHHHHHHHHHHHhcCCCCCccccccH-----HH-HHHHHhcCCCCCC-
Confidence 21 12234588899999998764 67889999999999999999999986543211 11 1122222221111
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
....++..+.+++.+||+.+|++|||++++++.++++
T Consensus 229 ----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 229 ----PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred ----ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1234567799999999999999999999999999875
No 85
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.7e-41 Score=306.54 Aligned_cols=258 Identities=23% Similarity=0.357 Sum_probs=203.5
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCee
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKR 135 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 135 (373)
...+++.+.||+|+||.||+|... ++..||+|.+...... .+.+.+|+.++..++||||+++++++......
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 346788899999999999999854 2468999998755432 25688899999999999999999999999999
Q ss_pred EEEEeccCcCCccccccCC------------CCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC
Q 048542 136 ALVYEYMPNGSLDRHVFPK------------ESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN 203 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~------------~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~ 203 (373)
++++||+++++|.+++... ......+++..+..++.|++.||.|||+. +++||||||+||+++++
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDK 160 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCC
Confidence 9999999999998887421 11234588889999999999999999998 99999999999999999
Q ss_pred CceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCcccccc
Q 048542 204 FIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAY 282 (373)
Q Consensus 204 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~ 282 (373)
+.+||+|||++................+++.|+|||.+.+. .++.++|||||||++|+|++ |..||.....
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------ 232 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYG--KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------ 232 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhcC--CCCcchhHHHHHHHHHHHHcCCCCCCCCCCH------
Confidence 99999999998765433322222334467899999988653 67889999999999999998 7777754322
Q ss_pred chHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 283 FPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
......+..+..... +..++..+.+++.+||+.+|.+||++++++..|+.
T Consensus 233 --~~~~~~i~~~~~~~~------~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 --QDVIEMIRNRQVLPC------PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred --HHHHHHHHcCCcCCC------CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 112223333222211 22345678999999999999999999999999975
No 86
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.9e-41 Score=301.73 Aligned_cols=255 Identities=29% Similarity=0.430 Sum_probs=205.0
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
..+|++.++||+|+||.||+|.+.++..||+|.++......+++.+|+.+++.++||||+++++++.+ ...+++|||++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 83 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence 34688899999999999999998777789999998766667889999999999999999999998754 56799999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++... .+..+++..+..++.|+++||+|||+. +++|+||||+||+++.++.++|+|||.+.........
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~ 158 (262)
T cd05071 84 KGSLLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 158 (262)
T ss_pred CCcHHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccccc
Confidence 99999888432 234578999999999999999999998 9999999999999999999999999999765433211
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
......++..|+|||...+. .++.++|+|||||++|+|++ |..||...... .............
T Consensus 159 -~~~~~~~~~~y~~PE~~~~~--~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--------~~~~~~~~~~~~~---- 223 (262)
T cd05071 159 -ARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGYRMP---- 223 (262)
T ss_pred -cccCCcccceecCHhHhccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--------HHHHHHhcCCCCC----
Confidence 11233466789999988654 68889999999999999999 77777644321 1222222222111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
.+..++..+.+++.+|++.||++||++.++++.|+..
T Consensus 224 --~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 224 --CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred --CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 1234566789999999999999999999999999864
No 87
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3e-41 Score=304.06 Aligned_cols=259 Identities=24% Similarity=0.380 Sum_probs=200.9
Q ss_pred HHHHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCe
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSK 134 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 134 (373)
....|++.+.||+|+||.||+|..+ ++..+|+|.+..... ...++.+|+.+++.++||||+++++++..+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3456788899999999999999753 346799998865332 23568899999999999999999999999999
Q ss_pred eEEEEeccCcCCccccccCCCCC------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEE
Q 048542 135 RALVYEYMPNGSLDRHVFPKESR------GQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKV 208 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl 208 (373)
.++||||+++++|.+++...... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 99999999999999887432211 23467888999999999999999998 9999999999999999999999
Q ss_pred eeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHH
Q 048542 209 SDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWV 287 (373)
Q Consensus 209 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~ 287 (373)
+|||++................++..|+|||.+.+. .++.++|||||||++|+|++ |..||...... ..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--------~~ 230 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--------QV 230 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcC--CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HH
Confidence 999998755433222111223457789999998764 68889999999999999999 67787543221 11
Q ss_pred HHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 288 YDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
............+ ...+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 231 ~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 231 LRFVMEGGLLDKP------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHHcCCcCCCC------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 2222222222211 2234578999999999999999999999999863
No 88
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.2e-41 Score=307.19 Aligned_cols=260 Identities=24% Similarity=0.424 Sum_probs=206.5
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAL 137 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 137 (373)
..+.+.+.||+|+||.||+|... ++..+++|.+...... .+.+.+|+..++.++|+||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35667789999999999999743 3456889988754433 3578899999999999999999999999999999
Q ss_pred EEeccCcCCccccccCCC------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCc
Q 048542 138 VYEYMPNGSLDRHVFPKE------------SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFI 205 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~ 205 (373)
||||+++++|.+++.... .....+++..+..++.|++.|++|||++ +++||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999885432 1234588999999999999999999998 9999999999999999999
Q ss_pred eEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccch
Q 048542 206 PKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFP 284 (373)
Q Consensus 206 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~ 284 (373)
++|+|||++................++..|+|||.+.+. .++.++|||||||++|+|++ |..||.......
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------ 233 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR--KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE------ 233 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------
Confidence 999999999765433222222334467889999988764 67889999999999999998 999886543211
Q ss_pred HHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 285 SWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
..+....+...... ..++..+.+++.+||+.+|++|||++++++.|+.+.+
T Consensus 234 --~~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 234 --VIECITQGRVLERP------RVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred --HHHHHhCCCCCCCC------ccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 22222332222211 2245678999999999999999999999999998755
No 89
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.2e-41 Score=314.17 Aligned_cols=248 Identities=21% Similarity=0.310 Sum_probs=195.2
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||.||+|..+ ++..||+|+++.... ....+..|..++..+ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999865 688999999976432 224577899999888 799999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|+|.+++. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++........
T Consensus 81 g~L~~~~~----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~-- 151 (329)
T cd05588 81 GDLMFHMQ----RQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD-- 151 (329)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCC--
Confidence 99987773 345699999999999999999999998 999999999999999999999999999874322111
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccc-cccchHHHHHHHhcCCCcccCccc
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSS-KAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
......||+.|+|||.+.+. .++.++|+|||||++|+|++|+.||........ ......+..+...... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-~------ 222 (329)
T cd05588 152 TTSTFCGTPNYIAPEILRGE--DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ-I------ 222 (329)
T ss_pred ccccccCCccccCHHHHcCC--CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC-C------
Confidence 12345689999999999764 678899999999999999999999975432211 1111223333332221 1
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCC------HHHHHH
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPS------MTKVLE 336 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps------~~ell~ 336 (373)
..+..++..+.+++.+||+.||.+||| ++++++
T Consensus 223 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 223 RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 122334667899999999999999998 566653
No 90
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.4e-41 Score=299.42 Aligned_cols=247 Identities=23% Similarity=0.402 Sum_probs=194.7
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
+.||+|+||.||+|..+ +++.+|+|.+..... ....+.+|+.+++.++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46899999999999865 788999998765332 236789999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeee
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 227 (373)
.+++.. .+..+++..+..++.|++.||+|||++ +++|+||||+||+++.++.+||+|||++.............
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 81 LTFLRT---EGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred HHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 988832 234688999999999999999999998 99999999999999999999999999987543221111111
Q ss_pred cccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhh
Q 048542 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIE 306 (373)
Q Consensus 228 ~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (373)
....+..|+|||.+.+. .++.++||||||+++|+|++ |..||...... .............. +
T Consensus 155 ~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--------~~~~~~~~~~~~~~------~ 218 (252)
T cd05084 155 MKQIPVKWTAPEALNYG--RYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--------QTREAIEQGVRLPC------P 218 (252)
T ss_pred CCCCceeecCchhhcCC--CCChHHHHHHHHHHHHHHHhCCCCCccccCHH--------HHHHHHHcCCCCCC------c
Confidence 11234579999998664 67889999999999999997 77777543221 12222222222111 1
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 307 SMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 307 ~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 219 ELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 234567899999999999999999999999886
No 91
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.6e-41 Score=313.14 Aligned_cols=243 Identities=22% Similarity=0.321 Sum_probs=190.8
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||.||+|..+ +++.+|+|+++.... ....+.+|..++..+ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46899999999999866 678999999976422 224567888888776 799999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|+|...+. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++........
T Consensus 81 ~~L~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~-- 151 (329)
T cd05618 81 GDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-- 151 (329)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC--
Confidence 99987773 345689999999999999999999998 999999999999999999999999999875322221
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccc-ccchHHHHHHHhcCCCcccCccc
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSK-AYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
......||..|+|||.+.+. .++.++|||||||++|+|++|+.||......... .....+......... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-~------ 222 (329)
T cd05618 152 TTSTFCGTPNYIAPEILRGE--DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-I------ 222 (329)
T ss_pred ccccccCCccccCHHHHcCC--CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC-C------
Confidence 12345689999999998764 7788999999999999999999999643222111 111222333222221 1
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCH
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSM 331 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~ 331 (373)
.++..++..+.+++.+||+.||++||++
T Consensus 223 ~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 223 RIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 1223446678999999999999999984
No 92
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.6e-41 Score=302.78 Aligned_cols=257 Identities=26% Similarity=0.416 Sum_probs=202.3
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-----CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-----TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAL 137 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-----~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 137 (373)
..+++.+.||+|+||.||+|... ++..+++|.+...... ...+.+|+.+++.++||||+++++++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 45677899999999999999742 4578999998753332 2568889999999999999999999999999999
Q ss_pred EEeccCcCCccccccCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC
Q 048542 138 VYEYMPNGSLDRHVFPKE-------------SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF 204 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~-------------~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~ 204 (373)
+|||+++++|.+++.... .....+++..+..++.|++.||.|||++ +++|+||||+||+++.++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 999999999988874221 1123578889999999999999999998 999999999999999999
Q ss_pred ceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccc
Q 048542 205 IPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYF 283 (373)
Q Consensus 205 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~ 283 (373)
.+||+|||++................++..|+|||.+.+. .++.++||||||+++|+|++ |..||.....
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~~g~~p~~~~~~------- 232 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYG--KFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN------- 232 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccC--CCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-------
Confidence 9999999999765433322222333466789999998654 67889999999999999998 8888864321
Q ss_pred hHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 284 PSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
............... +..++..+.+++.+||+.||.+||++.++++.|+.
T Consensus 233 -~~~~~~~~~~~~~~~------~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 -QEVIEMVRKRQLLPC------SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -HHHHHHHHcCCcCCC------CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 112222222222211 12345678999999999999999999999999875
No 93
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-42 Score=309.00 Aligned_cols=247 Identities=19% Similarity=0.317 Sum_probs=210.5
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.-|.+.+.||+|.|+.|-+|++- +|.+||||++.+.+.+ ...+..|++.|+.++|||||++|++......+|+|+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 34677899999999999999865 8999999999876554 3678999999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeee-CCCceEEeeccCcccCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD-HNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~-~~~~~kl~Dfg~~~~~~~ 219 (373)
.-.+|+|++++..++ ..+.+..+.+++.||+.|+.|||+. .+|||||||+|+.+. .-|-+||+|||++..+..
T Consensus 98 LGD~GDl~DyImKHe---~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHE---EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred ecCCchHHHHHHhhh---ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 999999999997654 4589999999999999999999998 999999999999876 568999999999987665
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
... .+..+|+..|.|||++.|. ....+++||||||++||.|++|+.||......+. ...+.
T Consensus 172 G~k---L~TsCGSLAYSAPEILLGD-sYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET--------LTmIm------- 232 (864)
T KOG4717|consen 172 GKK---LTTSCGSLAYSAPEILLGD-SYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET--------LTMIM------- 232 (864)
T ss_pred cch---hhcccchhhccCchhhhcC-ccCCcchhhhHHHHHHHHHHhCCCccccccchhh--------hhhhh-------
Confidence 543 3567899999999999886 2334678999999999999999999986654321 11111
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
......|..++.++++||..||..||++|.|.+||+.
T Consensus 233 DCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 233 DCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred cccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 2224567888999999999999999999999999875
No 94
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.9e-42 Score=316.26 Aligned_cols=240 Identities=22% Similarity=0.319 Sum_probs=193.4
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
+.||+|+||.||++... ++..||+|+++... .....+.+|+.+++.++||||+++++++......++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999865 78899999987532 22356678999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 146 SLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN-GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 146 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~-~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
+|..++. ....+++..+..++.|++.||+|||+ . +++||||||+|||++.++.+||+|||++........
T Consensus 81 ~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-- 151 (325)
T cd05594 81 ELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-- 151 (325)
T ss_pred cHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc--
Confidence 9988773 34568999999999999999999996 6 999999999999999999999999999874322221
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......||+.|+|||++.+. .++.++|||||||++|+|++|..||....... ........ .. .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~--------~~~~i~~~-~~------~ 214 (325)
T cd05594 152 TMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--------LFELILME-EI------R 214 (325)
T ss_pred ccccccCCcccCCHHHHccC--CCCCccccccccceeeeeccCCCCCCCCCHHH--------HHHHHhcC-CC------C
Confidence 12344699999999998764 77889999999999999999999996543211 11111111 11 1
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCC-----CHHHHHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRP-----SMTKVLE 336 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~ 336 (373)
.+..++..+.+++.+||+.||++|+ ++.++++
T Consensus 215 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 215 FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 1223466789999999999999997 8999875
No 95
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.8e-42 Score=319.62 Aligned_cols=250 Identities=24% Similarity=0.303 Sum_probs=202.1
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|.+.+.||+|+||.||+|... +++.||+|++.... .....+.+|+.++..++||||+++++++.++...++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 4677899999999999999976 78899999987542 233567889999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 82 YMPGGDLMNLLIR----KDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred CCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 9999999998843 35689999999999999999999998 9999999999999999999999999999765433
Q ss_pred C---------------------------CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCC
Q 048542 221 N---------------------------DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNM 273 (373)
Q Consensus 221 ~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~ 273 (373)
. .........||+.|+|||.+.+. .++.++|||||||++|+|++|+.||..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~ell~g~~Pf~~ 232 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT--PYGLECDWWSLGVILYEMLYGFPPFYS 232 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC--CCCCceeeEecchhhhhhccCCCCCCC
Confidence 2 00112344689999999999775 788999999999999999999999976
Q ss_pred CcCccccccchHHHHHHHhc-CCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCC-HHHHHHH
Q 048542 274 NATRSSKAYFPSWVYDQLNK-GGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPS-MTKVLEM 337 (373)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~ell~~ 337 (373)
..... ....+.. ......+... .++..+.+++.+|++ ||.+||+ ++++++.
T Consensus 233 ~~~~~--------~~~~i~~~~~~~~~p~~~----~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 233 DTLQE--------TYNKIINWKESLRFPPDP----PVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCHHH--------HHHHHhccCCcccCCCCC----CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 54211 1111111 1111121111 146788999999998 9999999 9999874
No 96
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.2e-41 Score=312.88 Aligned_cols=235 Identities=23% Similarity=0.298 Sum_probs=189.6
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||.||+|..+ +++.||+|+++... ...+.+..|..++..+ +||||+++++++......++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999876 67899999987532 2335667888888776 699999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|+|.+++. ....+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++........
T Consensus 81 g~L~~~i~----~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~-- 151 (320)
T cd05590 81 GDLMFHIQ----KSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK-- 151 (320)
T ss_pred chHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC--
Confidence 99988773 345689999999999999999999998 999999999999999999999999999875322211
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......||+.|+|||.+.+. .++.++|||||||++|+|++|+.||...... .....+..... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--------~~~~~i~~~~~-------~ 214 (320)
T cd05590 152 TTSTFCGTPDYIAPEILQEM--LYGPSVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAILNDEV-------V 214 (320)
T ss_pred cccccccCccccCHHHHcCC--CCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHhcCCC-------C
Confidence 12345699999999998764 6788999999999999999999999754321 12222222111 1
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSM 331 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~ 331 (373)
.+..++..+.+++.+||+.||.+||++
T Consensus 215 ~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 215 YPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 122346688999999999999999998
No 97
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.9e-41 Score=311.02 Aligned_cols=243 Identities=25% Similarity=0.342 Sum_probs=192.2
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHh---cccCCCceeeEeeEeeeCCeeEEE
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTI---GRIHHVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l---~~l~h~ni~~~~~~~~~~~~~~lv 138 (373)
|++.+.||+|+||.||+|..+ +++.||||+++... ...+.+.+|..++ +.++||||+++++++......|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 456789999999999999865 68899999997532 2234566666554 566899999999999999999999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
|||+++++|...+. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 81 ~E~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIH-----TDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 99999999987762 24689999999999999999999998 99999999999999999999999999987432
Q ss_pred CCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
.... ......|++.|+|||.+.+. .++.++|||||||++|+|++|+.||....... ....+..+..
T Consensus 153 ~~~~--~~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~G~~pf~~~~~~~--------~~~~i~~~~~-- 218 (324)
T cd05589 153 GFGD--RTSTFCGTPEFLAPEVLTET--SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE--------VFDSIVNDEV-- 218 (324)
T ss_pred CCCC--cccccccCccccCHhHhcCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCCC--
Confidence 2211 12345689999999998764 67889999999999999999999997543211 1122222111
Q ss_pred cCccchhhHHHHHHHHHHHHhhcCCCCCCCC-----CHHHHHH
Q 048542 299 LQNVTEIESMIARKLCMIGLWCIQVKAADRP-----SMTKVLE 336 (373)
Q Consensus 299 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~ 336 (373)
..+..++..+.+++.+||+.||.+|| ++.++++
T Consensus 219 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 219 -----RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -----CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 11223466789999999999999999 5666655
No 98
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.3e-41 Score=313.07 Aligned_cols=240 Identities=25% Similarity=0.355 Sum_probs=193.2
Q ss_pred cccCCCCcEEEEEEEEc----CCceeEEEEeccCc-----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 71 HKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSK-----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~----~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
+.||+|+||.||++... +++.||+|+++... .....+.+|+.+++.++||||+++++++..+...|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 57999999999999753 57889999987532 2234567899999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++++|.+.+. ....+.+..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLE----REGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 99999988873 345678888999999999999999998 99999999999999999999999999987432222
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
. ......||+.|+|||.+.+. .++.++|||||||++|+|++|+.||...... .....+..+. .
T Consensus 155 ~--~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~G~~pf~~~~~~--------~~~~~~~~~~-~---- 217 (323)
T cd05584 155 T--VTHTFCGTIEYMAPEILMRS--GHGKAVDWWSLGALMYDMLTGAPPFTAENRK--------KTIDKILKGK-L---- 217 (323)
T ss_pred C--cccccCCCccccChhhccCC--CCCCcceecccHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCC-C----
Confidence 1 12334689999999998764 6788999999999999999999999754321 1112222221 1
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCC-----CHHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRP-----SMTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~ 336 (373)
..+..++..+.+++.+||+.||++|| +++++++
T Consensus 218 --~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 218 --NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred --CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 11223456789999999999999999 7888766
No 99
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-42 Score=328.83 Aligned_cols=258 Identities=21% Similarity=0.223 Sum_probs=200.9
Q ss_pred HhhhhcccCCCCcEEEEEEEEcCC-ceeEEEEeccCcc-CHHHHHHHHHHhcccC-CCceeeEeeEe-ee------CCee
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQTG-GLIAVKMLENSKF-SAEEFINEVSTIGRIH-HVNVVQLLGFC-SE------GSKR 135 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~~~-~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~-h~ni~~~~~~~-~~------~~~~ 135 (373)
+.++.+.|.+|||+.||+|....+ ..||+|++-..+. ..+...+|+.+|++|+ |+|||.+++.. .. ....
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 345668999999999999997755 8999998765433 3377899999999997 99999999932 11 1245
Q ss_pred EEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcc
Q 048542 136 ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 215 (373)
.|+||||++|+|-+++..+.. ..|++.++++|+.|+++|+++||.. ..+|+|||||-+|||++.+++.||||||.++
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq--~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQ--TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred EeehhhccCCcHHHHHHHHHh--ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 689999999999999965543 3399999999999999999999986 6679999999999999999999999999997
Q ss_pred cCCCCCC-cee------eecccCCCCcccccccccc-cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHH
Q 048542 216 FHPKEND-FVS------ISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWV 287 (373)
Q Consensus 216 ~~~~~~~-~~~------~~~~~gt~~y~aPE~~~~~-~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~ 287 (373)
..-...+ ... .-...-|+.|+|||++.-. .-..++|+|||+|||+||-||....||+....-.
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la--------- 265 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA--------- 265 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee---------
Confidence 4322221 100 0122378999999987432 1367899999999999999999999998663211
Q ss_pred HHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 288 YDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
.+. + ...++. .+.++..+.+||..||+.||.+||++-++++.+-.+..
T Consensus 266 --Iln-g-~Y~~P~----~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 266 --ILN-G-NYSFPP----FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred --EEe-c-cccCCC----CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 000 0 011111 14678899999999999999999999999998887543
No 100
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-41 Score=310.86 Aligned_cols=252 Identities=24% Similarity=0.319 Sum_probs=212.3
Q ss_pred HHHHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccC-CCceeeEeeEeeeCCe
Q 048542 61 QIIAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIH-HVNVVQLLGFCSEGSK 134 (373)
Q Consensus 61 ~i~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~ 134 (373)
+-....|.+.+.||.|.||.||++..+ +|+.+|+|.+.+... ..+...+|+.+|+.++ ||||+.+++++++...
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~ 110 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS 110 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence 334557888899999999999999977 599999999987544 3468899999999998 9999999999999999
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC----CCceEEee
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH----NFIPKVSD 210 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~----~~~~kl~D 210 (373)
.++|||+|.||.|.+.+... .+++..+..++.|++.++.|||+. |++|||+||+|+|+.. ++.+|++|
T Consensus 111 ~~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~D 182 (382)
T KOG0032|consen 111 VYLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLID 182 (382)
T ss_pred EEEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEee
Confidence 99999999999999998544 299999999999999999999998 9999999999999963 35799999
Q ss_pred ccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHH
Q 048542 211 FGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQ 290 (373)
Q Consensus 211 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~ 290 (373)
||++...... ......+||+.|+|||++... .|+..+|+||+|+++|.|++|..||........ ...
T Consensus 183 FGla~~~~~~---~~~~~~~Gtp~y~APEvl~~~--~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~--------~~~ 249 (382)
T KOG0032|consen 183 FGLAKFIKPG---ERLHTIVGTPEYVAPEVLGGR--PYGDEVDVWSIGVILYILLSGVPPFWGETEFEI--------FLA 249 (382)
T ss_pred CCCceEccCC---ceEeeecCCccccCchhhcCC--CCCcccchhHHHHHHHHHhhCCCCCcCCChhHH--------HHH
Confidence 9999987662 235677899999999999764 889999999999999999999999987764321 112
Q ss_pred HhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 291 LNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
+..+.. ....+....++..+.+++..|+..||..|+|+.++++
T Consensus 250 i~~~~~---~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 250 ILRGDF---DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred HHcCCC---CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 222211 2223334566889999999999999999999999999
No 101
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=5.9e-41 Score=301.20 Aligned_cols=254 Identities=28% Similarity=0.426 Sum_probs=196.7
Q ss_pred hhcccCCCCcEEEEEEEEcCCc---eeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeC------CeeE
Q 048542 69 FTHKLGQGGFGSVYKGQLQTGG---LIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEG------SKRA 136 (373)
Q Consensus 69 ~~~~ig~G~~g~V~~~~~~~~~---~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------~~~~ 136 (373)
+.+.||+|+||.||+|.+..+. .+|+|.++.... ..+.+.+|+.+++.++|+||+++++++... ...+
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence 5688999999999999876433 589998876432 236788899999999999999999987432 2468
Q ss_pred EEEeccCcCCccccccCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 137 LVYEYMPNGSLDRHVFPKE--SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
++|||+++|+|.+++.... .....+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCcc
Confidence 9999999999988764322 2234589999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhc
Q 048542 215 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNK 293 (373)
Q Consensus 215 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 293 (373)
................+++.|+|||.+.+. .++.++|||||||++|+|++ |..||..... .........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~~ 229 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADR--VYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--------SEIYDYLRQ 229 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCC--CcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHc
Confidence 865433221111223466789999998764 67889999999999999999 7788764322 112233333
Q ss_pred CCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 294 GGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
+...... ..++..+.+++.+||+.||++|||++++++.|+.+
T Consensus 230 ~~~~~~~------~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 230 GNRLKQP------PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCCC------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 3222211 23456789999999999999999999999999864
No 102
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=7.6e-41 Score=298.62 Aligned_cols=255 Identities=29% Similarity=0.481 Sum_probs=207.5
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
...|.+.+.||+|+||.||+|..+++..+|+|.+.......+++.+|+.+++.++|+||+++++++......+++|||++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 45677889999999999999998878889999998877777889999999999999999999999998889999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++... .+..+++..+..++.+++.|+.|||++ +++|+||||+||+++.++.++|+|||++....... .
T Consensus 85 ~~~L~~~i~~~--~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-~ 158 (261)
T cd05034 85 KGSLLDFLKSG--EGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDE-Y 158 (261)
T ss_pred CCCHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchh-h
Confidence 99999888442 235689999999999999999999998 99999999999999999999999999987654321 1
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
.......++..|+|||.+.+. .++.++|+||+|+++|+|++ |+.||...... ........+.....+
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~-- 226 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYG--RFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--------EVLEQVERGYRMPRP-- 226 (261)
T ss_pred hhhhccCCCccccCHHHhccC--CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCC--
Confidence 111222355689999988764 67889999999999999998 88888543321 122222222211111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
...+..+.+++.+||+.+|++||+++++.+.|+.
T Consensus 227 ----~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 227 ----PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ----CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1225678999999999999999999999999875
No 103
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=5e-41 Score=302.47 Aligned_cols=259 Identities=26% Similarity=0.395 Sum_probs=204.2
Q ss_pred HHHHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCe
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSK 134 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 134 (373)
....+.+.+.||+|+||.||+|..+ ++..+|+|.+...... ...+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 3456777899999999999999864 2368999998754322 3568899999999999999999999999999
Q ss_pred eEEEEeccCcCCccccccCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEE
Q 048542 135 RALVYEYMPNGSLDRHVFPKES------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKV 208 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl 208 (373)
.+++|||+++++|.+++..... ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEE
Confidence 9999999999999988854321 123478889999999999999999998 9999999999999999999999
Q ss_pred eeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHH
Q 048542 209 SDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWV 287 (373)
Q Consensus 209 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~ 287 (373)
+|||++................++..|+|||.+.+. .++.++|||||||++|+|++ |..||....... .
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--------~ 230 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG--VFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE--------V 230 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcC--CCCcccchHHHHHHHHHhhccCCCCCccCCHHH--------H
Confidence 999998765433322222233467889999988654 67889999999999999998 888886433211 2
Q ss_pred HHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 288 YDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
......+.....+ ..++..+.+++.+||+.+|++|||+.++++.|+.
T Consensus 231 ~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 231 LKFVIDGGHLDLP------ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHHHhcCCCCCCC------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 2222332222222 2235688999999999999999999999998863
No 104
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=8.3e-41 Score=301.53 Aligned_cols=255 Identities=26% Similarity=0.389 Sum_probs=199.7
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCc----eeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGG----LIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~----~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 138 (373)
.+++.+.||+|+||.||+|.+. ++. .+++|.+..... ...++..|+..+..++||||+++++++.. ...+++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEE
Confidence 4567789999999999999865 344 478887754322 22567788889999999999999998764 557899
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
+||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 87 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 87 TQLSPLGSLLDHVRQ---HRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEeCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 999999999998843 235689999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCc
Q 048542 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 297 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (373)
............++..|+|||.+.+. .++.++||||||+++|||++ |..||...... ...+.+..+...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~--~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~ 230 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFG--RYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--------EVPDLLEKGERL 230 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccC--CcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHCCCcC
Confidence 33322223344577889999998654 78899999999999999998 99888654321 122333333322
Q ss_pred ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 298 ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
.... .++..+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus 231 ~~~~------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 231 AQPQ------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCC------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 2221 123467889999999999999999999999988654
No 105
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.6e-42 Score=315.32 Aligned_cols=250 Identities=24% Similarity=0.306 Sum_probs=196.5
Q ss_pred hhhhcccCCCCcEEEEEEEEc----CCceeEEEEeccCc-----cCHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeE
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSK-----FSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~----~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~ 136 (373)
|++.+.||+|+||.||+++.. ++..||+|++.... ...+.+..|+.+++.+ +|+||+++++++..+...+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 567899999999999999753 67899999986532 2235677899999999 5899999999999999999
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
+||||+++|+|.+++. ....+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++..
T Consensus 82 lv~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 82 LILDYVSGGEMFTHLY----QRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 9999999999988883 345689999999999999999999998 999999999999999999999999999875
Q ss_pred CCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCC
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGD 296 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
....... ......||..|+|||.+.+. ..++.++|||||||++|+|++|..||........ ............
T Consensus 155 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~~~~~~~~~~~~- 227 (332)
T cd05614 155 FLSEEKE-RTYSFCGTIEYMAPEIIRGK-GGHGKAVDWWSLGILIFELLTGASPFTLEGERNT----QSEVSRRILKCD- 227 (332)
T ss_pred ccccCCC-ccccccCCccccCHHHhcCC-CCCCCccccccchhhhhhhhcCCCCCCCCCCCCC----HHHHHHHHhcCC-
Confidence 4332211 12234699999999998754 3467899999999999999999999975432211 111111111111
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCCCC-----CHHHHHH
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAADRP-----SMTKVLE 336 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~ 336 (373)
. ..+..++..+.+++.+||+.||++|| +++++++
T Consensus 228 ~------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 228 P------PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred C------CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 1 11223456789999999999999999 6777765
No 106
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8.9e-41 Score=333.99 Aligned_cols=270 Identities=23% Similarity=0.356 Sum_probs=208.6
Q ss_pred CCccChhHHHHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEe
Q 048542 54 PKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFC 129 (373)
Q Consensus 54 ~~~~~~~~i~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~ 129 (373)
|..+...+.....|.+.+.||+|+||+||+|... ++..+|+|.+...... ...+..|+.+++.++||||+++++++
T Consensus 2 p~~~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f 81 (1021)
T PTZ00266 2 PGKYDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRF 81 (1021)
T ss_pred CccccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEE
Confidence 3445556666778899999999999999999876 6778999998754332 36688999999999999999999988
Q ss_pred ee--CCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCC----CCCeEecCcCCCCeeeeC-
Q 048542 130 SE--GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC----DVCILHFDIKPHNILLDH- 202 (373)
Q Consensus 130 ~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~----~~~ivH~dikp~Nil~~~- 202 (373)
.. ....|+||||+++++|.+++.........+++..++.|+.||+.||.|||+.. ..+|+||||||+|||++.
T Consensus 82 ~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~ 161 (1021)
T PTZ00266 82 LNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTG 161 (1021)
T ss_pred EecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecC
Confidence 54 45789999999999999988544334467999999999999999999999841 125999999999999964
Q ss_pred ----------------CCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc
Q 048542 203 ----------------NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG 266 (373)
Q Consensus 203 ----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~ 266 (373)
.+.+||+|||++........ .....||+.|+|||++.+....++.++|||||||++|+|++
T Consensus 162 ~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLT 238 (1021)
T PTZ00266 162 IRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS 238 (1021)
T ss_pred ccccccccccccccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence 23589999999976543221 23446999999999986554568889999999999999999
Q ss_pred CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHH--HHHhc
Q 048542 267 GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVL--EMLEG 340 (373)
Q Consensus 267 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell--~~L~~ 340 (373)
|..||...... ..+...+........ ...+..+.+|+..||+.+|.+||++.+++ ..+..
T Consensus 239 Gk~PF~~~~~~-------~qli~~lk~~p~lpi-------~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 239 GKTPFHKANNF-------SQLISELKRGPDLPI-------KGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred CCCCCCcCCcH-------HHHHHHHhcCCCCCc-------CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence 99999643321 112222322221111 12356789999999999999999999998 44543
No 107
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=4.9e-41 Score=305.10 Aligned_cols=260 Identities=25% Similarity=0.420 Sum_probs=204.9
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC--HHHHHHHHHHhccc-CCCceeeEeeEeeeCCe
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS--AEEFINEVSTIGRI-HHVNVVQLLGFCSEGSK 134 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~ 134 (373)
...|++.+.||+|+||.||++... ....+|+|.+...... ..++.+|+.+++.+ +|+||+++++++..+..
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 345677799999999999999864 2357999988754332 25678999999999 79999999999999999
Q ss_pred eEEEEeccCcCCccccccCCC------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC
Q 048542 135 RALVYEYMPNGSLDRHVFPKE------------SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH 202 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~ 202 (373)
.+++|||+++|+|.+++.... .....+++..+..++.|++.||+|||+. +++||||||+||+++.
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcC
Confidence 999999999999998874321 2345689999999999999999999998 9999999999999999
Q ss_pred CCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccc
Q 048542 203 NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKA 281 (373)
Q Consensus 203 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~ 281 (373)
++.+||+|||++................++..|+|||.+.+. .++.++|||||||++|+|++ |..||......
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---- 241 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDR--VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE---- 241 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccC--CcCcccceeehhhHHHHHhcCCCCCCCCCCHH----
Confidence 999999999999865443322222233456789999988654 67889999999999999997 88887643321
Q ss_pred cchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCC
Q 048542 282 YFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342 (373)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~ 342 (373)
........+..... +...+..+.+|+.+||+.||++|||+.++++.|+.+.
T Consensus 242 ----~~~~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 242 ----ELFKLLKEGYRMEK------PQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ----HHHHHHHcCCcCCC------CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 12233333322221 1223567899999999999999999999999998753
No 108
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-42 Score=303.92 Aligned_cols=258 Identities=25% Similarity=0.329 Sum_probs=194.4
Q ss_pred hhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCC-----eeEEEEec
Q 048542 68 HFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS-----KRALVYEY 141 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-----~~~lv~e~ 141 (373)
.-.+.+|.|+||.||.|... +++.||||.+..+..-. .+|+.+|+.+.||||+++..+|.... ...+||||
T Consensus 27 ~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k---nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVley 103 (364)
T KOG0658|consen 27 EAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK---NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEY 103 (364)
T ss_pred EeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC---cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHh
Confidence 34588999999999999865 67899999887654322 36999999999999999988874422 34589999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC-CceEEeeccCcccCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~-~~~kl~Dfg~~~~~~~~ 220 (373)
|+. +|.+.+......+..++...+.-+..||.+||+|||+. +|+||||||.|+|+|.+ |.+||||||.|+.+...
T Consensus 104 mP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ 179 (364)
T KOG0658|consen 104 MPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG 179 (364)
T ss_pred chH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence 976 89888855444567788888889999999999999998 99999999999999955 99999999999987665
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHH----HHHHhcCC-
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWV----YDQLNKGG- 295 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~- 295 (373)
....++ ..|-.|+|||.+.|. ..|+.+.||||.||++.||+-|++-|.+.+....-..+-... .+.+....
T Consensus 180 epniSY---icSRyYRaPELifga-~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~ 255 (364)
T KOG0658|consen 180 EPNISY---ICSRYYRAPELIFGA-TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNP 255 (364)
T ss_pred CCceeE---EEeccccCHHHHcCc-cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCc
Confidence 544332 367789999999886 689999999999999999999999998755321100000000 00111000
Q ss_pred ---CcccCcc------chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 296 ---DLELQNV------TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 296 ---~~~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
....+.. .-.....+.+..+|+.++|+.+|.+|.++.|++.
T Consensus 256 ~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 256 NYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred ccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 0000000 0122345678999999999999999999998864
No 109
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.1e-41 Score=310.72 Aligned_cols=239 Identities=23% Similarity=0.295 Sum_probs=189.3
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||.||+|... +++.||+|+++... ...+....|..++... +||||+++++++..+...++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999865 67889999987532 2234455666666644 899999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|+|..++. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++....... .
T Consensus 81 g~L~~~~~----~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~ 151 (316)
T cd05592 81 GDLMFHIQ----SSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--G 151 (316)
T ss_pred CcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--C
Confidence 99988873 235689999999999999999999998 99999999999999999999999999997543222 1
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......||+.|+|||.+.+. .++.++|||||||++|+|++|..||...... .....+... .. .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~-~~------~ 214 (316)
T cd05592 152 KASTFCGTPDYIAPEILKGQ--KYNESVDWWSFGVLLYEMLIGQSPFHGEDED--------ELFDSILND-RP------H 214 (316)
T ss_pred ccccccCCccccCHHHHcCC--CCCCcccchhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcC-CC------C
Confidence 22345699999999998764 6788999999999999999999999754321 122222211 11 1
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHH-HHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMT-KVL 335 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~-ell 335 (373)
.+..++..+.+++.+||+.||.+||++. +++
T Consensus 215 ~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 215 FPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 2233466789999999999999999875 453
No 110
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.5e-41 Score=307.39 Aligned_cols=250 Identities=26% Similarity=0.347 Sum_probs=199.3
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC----HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS----AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
+|++.+.||+|+||.||++... +++.||+|.+...... ...+.+|+.+++.++||||+++++.+..+...++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3667789999999999999865 6889999998754322 2456789999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++|+|.+.+... ....+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNM--GNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 99999998777432 234689999999999999999999998 9999999999999999999999999998765332
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.. .....|+..|+|||.+.+. .++.++||||+||++|+|++|..||........ .......+....
T Consensus 156 ~~---~~~~~~~~~y~aPE~~~~~--~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~----- 221 (285)
T cd05605 156 ET---IRGRVGTVGYMAPEVVKNE--RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK----REEVERRVKEDQ----- 221 (285)
T ss_pred Cc---cccccCCCCccCcHHhcCC--CCCccccchhHHHHHHHHHHCCCCCCCCchhhH----HHHHHHHhhhcc-----
Confidence 21 2334689999999998764 678899999999999999999999975432110 011111111111
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCC-----CHHHHHH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRP-----SMTKVLE 336 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~ 336 (373)
...+..++..+.+|+.+||+.||.+|| +++++++
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 222 --EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred --cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 122234567889999999999999999 8888855
No 111
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=8.6e-41 Score=300.12 Aligned_cols=256 Identities=29% Similarity=0.447 Sum_probs=200.1
Q ss_pred hhhhcccCCCCcEEEEEEEEc----CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeCCe-----
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEGSK----- 134 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~----~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~----- 134 (373)
+++.+.||+|+||.||+|... .+..||+|.++..... .+.+.+|+..++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 356789999999999999864 2367999998764333 3578899999999999999999998865443
Q ss_pred -eEEEEeccCcCCccccccCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeec
Q 048542 135 -RALVYEYMPNGSLDRHVFPKE--SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211 (373)
Q Consensus 135 -~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Df 211 (373)
.++++||+++++|..++.... .....+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 789999999999988874432 2234689999999999999999999998 9999999999999999999999999
Q ss_pred cCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHH
Q 048542 212 GLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQ 290 (373)
Q Consensus 212 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~ 290 (373)
|++................++..|+|||.+.+. .++.++|||||||++|+|++ |..||...... ...+.
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--------~~~~~ 227 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADR--VYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--------EIYDY 227 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccC--CCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHH
Confidence 999865433322222223356789999988654 67889999999999999999 77887543321 12233
Q ss_pred HhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 291 LNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
...+..... +..++..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 228 ~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 228 LRHGNRLKQ------PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHcCCCCCC------CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 333322221 233466899999999999999999999999999864
No 112
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.6e-41 Score=304.89 Aligned_cols=258 Identities=26% Similarity=0.404 Sum_probs=203.3
Q ss_pred hhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEE
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 138 (373)
+++.+.||+|+||.||+|... ....+++|.+...... ..++.+|+.+++.++||||+++++.+......+++
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 456789999999999999753 2346889888754332 35788999999999999999999999999999999
Q ss_pred EeccCcCCccccccCCC--------------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCe
Q 048542 139 YEYMPNGSLDRHVFPKE--------------------SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 198 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~--------------------~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Ni 198 (373)
+||+.+++|.+++.... .....+++..++.++.|++.||.|||+. +++||||||+||
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~ni 158 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARNV 158 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---CeehhhhhhheE
Confidence 99999999988874321 1124588999999999999999999998 999999999999
Q ss_pred eeeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCc
Q 048542 199 LLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATR 277 (373)
Q Consensus 199 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~ 277 (373)
++++++.+||+|||++................++..|+|||.+.+. .++.++||||||+++|+|++ |..||.....
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~- 235 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDH--IYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP- 235 (290)
T ss_pred EEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccC--CcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-
Confidence 9999999999999999765433322222333466789999988664 67889999999999999998 8888864322
Q ss_pred cccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 278 SSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
............... +..++.++.+++.+||+.+|++||++.++++.|+++..
T Consensus 236 -------~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 -------ERLFNLLKTGYRMER------PENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -------HHHHHHHhCCCCCCC------CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 123333333322221 12345678999999999999999999999999998643
No 113
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.5e-41 Score=318.11 Aligned_cols=251 Identities=22% Similarity=0.237 Sum_probs=194.5
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
|++.+.||+|+||+||+|... +++.||+|++..... ....+.+|+.+++.++||||+++++++.+....++||||
T Consensus 3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~ 82 (381)
T cd05626 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 82 (381)
T ss_pred ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEec
Confidence 566789999999999999865 678999999976432 235678899999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++|+|.+++. +...+++..+..++.|++.||.|||+. +|+||||||+|||++.++++||+|||++.......
T Consensus 83 ~~gg~L~~~l~----~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 83 IPGGDMMSLLI----RMEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred CCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 99999998883 345688999999999999999999998 99999999999999999999999999975321100
Q ss_pred Cc---------------------------------------------eeeecccCCCCcccccccccccCCcCcccchHH
Q 048542 222 DF---------------------------------------------VSISATRGTIGYIAPELISRNFGTVSCKSDVYG 256 (373)
Q Consensus 222 ~~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~s~~~Dvws 256 (373)
.. .......||+.|+|||.+.+. .++.++||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~~DiwS 233 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK--GYTQLCDWWS 233 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCC--CCCCccceee
Confidence 00 001124699999999998764 6788999999
Q ss_pred HHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHh--hcCCCCCCCCCHHHH
Q 048542 257 FGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLW--CIQVKAADRPSMTKV 334 (373)
Q Consensus 257 lG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dp~~Rps~~el 334 (373)
|||++|+|++|..||....... ..............+.. ..++..+.+|+.+ |+..+|..||+++++
T Consensus 234 lG~il~elltG~~Pf~~~~~~~-------~~~~i~~~~~~~~~~~~----~~~s~~~~dli~~ll~~~~~~~~R~~~~~~ 302 (381)
T cd05626 234 VGVILFEMLVGQPPFLAPTPTE-------TQLKVINWENTLHIPPQ----VKLSPEAVDLITKLCCSAEERLGRNGADDI 302 (381)
T ss_pred hhhHHHHHHhCCCCCcCCCHHH-------HHHHHHccccccCCCCC----CCCCHHHHHHHHHHccCcccccCCCCHHHH
Confidence 9999999999999997644321 11111111111122211 1245678888887 556666679999999
Q ss_pred HHH
Q 048542 335 LEM 337 (373)
Q Consensus 335 l~~ 337 (373)
++.
T Consensus 303 l~h 305 (381)
T cd05626 303 KAH 305 (381)
T ss_pred hcC
Confidence 873
No 114
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.7e-41 Score=312.15 Aligned_cols=241 Identities=20% Similarity=0.272 Sum_probs=192.7
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||.||+|..+ +++.||+|++.... ...+.+..|..++..+ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46899999999999876 67899999987632 2234567888888766 799999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|...+. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++........
T Consensus 81 ~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~-- 151 (321)
T cd05591 81 GDLMFQIQ----RSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV-- 151 (321)
T ss_pred CcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCc--
Confidence 99988773 345688999999999999999999998 999999999999999999999999999875332221
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......||+.|+|||.+.+. .++.++||||+||++|+|++|+.||....... ....+..... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~--------~~~~i~~~~~-------~ 214 (321)
T cd05591 152 TTTTFCGTPDYIAPEILQEL--EYGPSVDWWALGVLMYEMMAGQPPFEADNEDD--------LFESILHDDV-------L 214 (321)
T ss_pred cccccccCccccCHHHHcCC--CCCCccceechhHHHHHHhcCCCCCCCCCHHH--------HHHHHHcCCC-------C
Confidence 12345689999999998764 77889999999999999999999997544211 1222222111 1
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCC-------CHHHHHHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRP-------SMTKVLEM 337 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rp-------s~~ell~~ 337 (373)
.+..++..+.+++.+||+.||++|| +++++++.
T Consensus 215 ~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 215 YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 1123456789999999999999999 77887643
No 115
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=7.2e-41 Score=299.81 Aligned_cols=258 Identities=22% Similarity=0.347 Sum_probs=206.6
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|++.+.||+|+||.||+|..+ ++..+++|.+..... ...++.+|+.+++.++|+||+++++++.++...+++||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 82 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence 5677899999999999999864 789999998765322 23578899999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++++|.+++.........+++..+..++.|++.|+.|||++ +++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 83 LADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred ecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 9999999988754334456789999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.. ......++..|+|||.+.+. .++.++|+||||+++|+|++|..||....... ...............
T Consensus 160 ~~--~~~~~~~~~~~~ape~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~- 228 (267)
T cd08229 160 TT--AAHSLVGTPYYMSPERIHEN--GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL------YSLCKKIEQCDYPPL- 228 (267)
T ss_pred Cc--ccccccCCcCccCHHHhcCC--CccchhhHHHHHHHHHHHHhCCCCcccccchH------HHHhhhhhcCCCCCC-
Confidence 21 12234588899999998664 67889999999999999999999986433211 011111111111111
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
.+..++..+.+++.+||+.||++|||+.+|++.++.+
T Consensus 229 ----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 229 ----PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred ----CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1123567899999999999999999999999999865
No 116
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2e-41 Score=310.81 Aligned_cols=239 Identities=22% Similarity=0.286 Sum_probs=190.6
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||.||+|..+ +|..||+|.++... ........|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999976 68899999987642 2334566777777654 899999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|+|..++. .+..+++..+..++.|++.||+|||++ +++||||||+||+++.++.++|+|||++........
T Consensus 81 g~L~~~i~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 151 (316)
T cd05620 81 GDLMFHIQ----DKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN-- 151 (316)
T ss_pred CcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC--
Confidence 99988873 245688999999999999999999998 999999999999999999999999999864322111
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......||+.|+|||.+.+. .++.++||||+||++|+|++|..||...... .....+.... . .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--------~~~~~~~~~~-~------~ 214 (316)
T cd05620 152 RASTFCGTPDYIAPEILQGL--KYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--------ELFESIRVDT-P------H 214 (316)
T ss_pred ceeccCCCcCccCHHHHcCC--CCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCC-C------C
Confidence 22345699999999999764 7888999999999999999999999754321 1222222211 1 1
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHH-HHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMT-KVL 335 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~-ell 335 (373)
.+..++.++.+++.+||+.||++||++. +++
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 215 YPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1223466789999999999999999984 554
No 117
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.4e-41 Score=318.28 Aligned_cols=250 Identities=23% Similarity=0.259 Sum_probs=197.1
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|++.+.||+|+||.||+|... +++.||||++.... .....+.+|+.+++.++||||+++++++.++...++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 3567799999999999999976 68899999997542 223557789999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++|+|.+++. .+..+++..+..++.|++.||+|||+. +++||||||+|||++.++.++|+|||++......
T Consensus 82 ~~~~g~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 82 YLPGGDMMTLLM----KKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCcHHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 999999999883 245689999999999999999999998 9999999999999999999999999998754321
Q ss_pred CCce------------------------------------eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHH
Q 048542 221 NDFV------------------------------------SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 264 (373)
Q Consensus 221 ~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~l 264 (373)
.... ......||+.|+|||++.+. .++.++|||||||++|+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~el 232 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQT--GYNKECDWWSLGVIMYEM 232 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCC--CCCCeeeeecchhHHHHh
Confidence 1000 00123589999999998764 688999999999999999
Q ss_pred HcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCC---HHHHHH
Q 048542 265 AGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPS---MTKVLE 336 (373)
Q Consensus 265 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~ell~ 336 (373)
++|..||....... ..............+.. ..++..+.+|+.+|+. +|.+|++ ++++++
T Consensus 233 ~~G~~Pf~~~~~~~-------~~~~i~~~~~~~~~~~~----~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 233 LVGYPPFCSDNPQE-------TYRKIINWKETLQFPDE----VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred hcCCCCCCCCCHHH-------HHHHHHcCCCccCCCCC----CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 99999997544211 11111111111111111 1245678899999997 9999998 888876
No 118
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=5.1e-41 Score=302.98 Aligned_cols=262 Identities=22% Similarity=0.313 Sum_probs=206.0
Q ss_pred HHHHhhhhcccCCCCcEEEEEEEEcC-----CceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeee-CCe
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQLQT-----GGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSE-GSK 134 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~~~~-----~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-~~~ 134 (373)
...+|.+.+.||+|+||.||+|.+.. +..|++|.+..... ..+.+.+|+.+++.++|+||+++++++.. +..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 34577788999999999999998764 67899998875432 23668899999999999999999998765 567
Q ss_pred eEEEEeccCcCCccccccCCCCC----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEee
Q 048542 135 RALVYEYMPNGSLDRHVFPKESR----GQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSD 210 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~D 210 (373)
.+++++|+++++|.+++...... +..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECC
Confidence 89999999999999887543221 25689999999999999999999998 999999999999999999999999
Q ss_pred ccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHH
Q 048542 211 FGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYD 289 (373)
Q Consensus 211 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~ 289 (373)
||+++...............++..|+|||.+.+. .++.++|||||||++|++++ |+.||...... ....
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~ 230 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNK--EYSSASDVWSFGVLLWELMTLGQTPYVEIDPF--------EMAA 230 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcC--CCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH--------HHHH
Confidence 9999765433221112233466789999998764 67889999999999999998 99998654321 1222
Q ss_pred HHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 290 QLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
....+..... +..++..+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus 231 ~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 231 YLKDGYRLAQ------PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred HHHcCCCCCC------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 2222222111 11234678999999999999999999999999998654
No 119
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.5e-40 Score=296.19 Aligned_cols=250 Identities=32% Similarity=0.513 Sum_probs=205.0
Q ss_pred cccCCCCcEEEEEEEEcC----CceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQT----GGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~----~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||.||+|.... +..+++|.+...... .+.+.+|+..+..++|+|++++++++......+++|||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 468999999999998763 778999999876544 47889999999999999999999999999999999999999
Q ss_pred CCccccccCCCCC-----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 145 GSLDRHVFPKESR-----GQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 145 gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
++|.+++...... ...+++..++.++.|++.||+|||++ +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999998543211 46799999999999999999999998 999999999999999999999999999987655
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
...........++..|+|||.+.+. .++.++||||+|+++|+|++ |..||..... .........+....
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~ 227 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDG--IFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--------EEVLEYLRKGYRLP 227 (262)
T ss_pred ccccccccCCCcCccccCHHHhccC--CcchhhccHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCC
Confidence 4322233445678899999988764 78889999999999999999 5888875532 11223333322221
Q ss_pred cCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 299 LQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 299 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
.+..++..+.+++.+||+.+|++|||++++++.|+
T Consensus 228 ------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 228 ------KPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ------CCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 12334678999999999999999999999999874
No 120
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=9.8e-41 Score=297.40 Aligned_cols=246 Identities=24% Similarity=0.429 Sum_probs=196.1
Q ss_pred ccCCCCcEEEEEEEEc---CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 72 KLGQGGFGSVYKGQLQ---TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 72 ~ig~G~~g~V~~~~~~---~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
.||+|+||.||+|.++ ++..+|+|+++..... .+++.+|+.+++.++||||+++++++.. ...+++|||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 5899999999999643 5788999998754332 3678899999999999999999998864 5678999999999
Q ss_pred CccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce-
Q 048542 146 SLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV- 224 (373)
Q Consensus 146 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~- 224 (373)
+|.+++. ....+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||++..........
T Consensus 81 ~L~~~l~----~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQ----KNKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 9998883 234688999999999999999999998 99999999999999999999999999998664433221
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
......++..|+|||.+.+. .++.++|+|||||++|+|++ |..||...... .....+..+.....+
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~i~~~~~~~~~--- 220 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYY--KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--------EVTQMIESGERMECP--- 220 (257)
T ss_pred ecCCCCCCccccCHhHhccC--CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHCCCCCCCC---
Confidence 11222345789999988653 67889999999999999998 89998754321 122333333322222
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
..++..+.+++.+||+.||++||++.+|.+.|++.
T Consensus 221 ---~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 221 ---QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred ---CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 23456789999999999999999999999999863
No 121
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.2e-40 Score=297.40 Aligned_cols=253 Identities=27% Similarity=0.423 Sum_probs=203.2
Q ss_pred HHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
..|.+.+.||+|++|.||+|.++.+..+|+|.+.......+.+.+|+.+++.++|+|++++++++.. ...+++|||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~ 84 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMGK 84 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCCC
Confidence 4577889999999999999998877789999988766666788999999999999999999998754 568899999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|.+++... ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++........ .
T Consensus 85 ~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~-~ 158 (260)
T cd05069 85 GSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY-T 158 (260)
T ss_pred CCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcc-c
Confidence 9999888532 234588999999999999999999998 999999999999999999999999999976543221 1
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
......++..|+|||...+. .++.++|+||||+++|+|++ |..||...... .............
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~----- 223 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--------EVLEQVERGYRMP----- 223 (260)
T ss_pred ccCCCccchhhCCHHHhccC--CcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCC-----
Confidence 11233466789999988654 67889999999999999999 88888653321 1122222221111
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
.+...+..+.+++.+||+.||++||+++++++.|+.
T Consensus 224 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 -CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 123446789999999999999999999999999975
No 122
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.5e-41 Score=305.60 Aligned_cols=256 Identities=23% Similarity=0.345 Sum_probs=191.0
Q ss_pred HhhhhcccCCCCcEEEEEEEEc--CCceeEEEEeccCcc---CHHHHHHHHHHhccc---CCCceeeEeeEee-----eC
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ--TGGLIAVKMLENSKF---SAEEFINEVSTIGRI---HHVNVVQLLGFCS-----EG 132 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~--~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l---~h~ni~~~~~~~~-----~~ 132 (373)
+|++.+.||+|+||.||+|... ++..||+|.++.... ....+.+|+.+++.+ +||||+++++++. ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 4677899999999999999863 467899998875332 224556777776665 6999999999885 34
Q ss_pred CeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeecc
Q 048542 133 SKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFG 212 (373)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg 212 (373)
...++||||+. ++|.+++.... ...+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 56899999995 58888774322 34588999999999999999999998 99999999999999999999999999
Q ss_pred CcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHh
Q 048542 213 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLN 292 (373)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~ 292 (373)
++....... ......|++.|+|||.+.+. .++.++|||||||++|+|++|..||......... ........
T Consensus 156 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~----~~i~~~~~ 226 (290)
T cd07862 156 LARIYSFQM---ALTSVVVTLWYRAPEVLLQS--SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL----GKILDVIG 226 (290)
T ss_pred ceEeccCCc---ccccccccccccChHHHhCC--CCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHH----HHHHHHhC
Confidence 997654321 22345689999999998664 6788999999999999999999999765432100 00000000
Q ss_pred cC-------------CCc---ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 293 KG-------------GDL---ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 293 ~~-------------~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.. ... ...........++..+.+|+.+||+.||++|||+.|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 227 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00 000 000011122235667899999999999999999999985
No 123
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.4e-41 Score=309.29 Aligned_cols=239 Identities=23% Similarity=0.300 Sum_probs=190.6
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcc-cCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGR-IHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~-l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||.||+|... +++.||+|+++... ........|..++.. ++||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46899999999999876 57899999987642 223456677777775 4899999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|+|.+++. ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++........
T Consensus 81 g~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 151 (316)
T cd05619 81 GDLMFHIQ----SCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA-- 151 (316)
T ss_pred CcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC--
Confidence 99988883 235688999999999999999999998 999999999999999999999999999874322111
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......||+.|+|||.+.+. .++.++||||+||++|+|++|..||...... .....+.... . .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~~~-~------~ 214 (316)
T cd05619 152 KTCTFCGTPDYIAPEILLGQ--KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--------ELFQSIRMDN-P------C 214 (316)
T ss_pred ceeeecCCccccCHHHHcCC--CCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCC-C------C
Confidence 12345689999999998764 6788999999999999999999999754321 1222222211 1 1
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHH-HHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMT-KVL 335 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~-ell 335 (373)
.+..++..+.+++.+||+.||++||++. ++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 215 YPRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred CCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 1223456789999999999999999997 554
No 124
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.4e-41 Score=307.50 Aligned_cols=263 Identities=25% Similarity=0.412 Sum_probs=205.3
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEEEc--------CCceeEEEEeccCcc--CHHHHHHHHHHhccc-CCCceeeEeeEee
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQLQ--------TGGLIAVKMLENSKF--SAEEFINEVSTIGRI-HHVNVVQLLGFCS 130 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l-~h~ni~~~~~~~~ 130 (373)
+....|.+.+.||+|+||.||++... +...+|+|.++.... ...++.+|+.+++.+ +||||+++++++.
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 33467888999999999999999753 234699999876432 235688899999999 7999999999999
Q ss_pred eCCeeEEEEeccCcCCccccccCCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCe
Q 048542 131 EGSKRALVYEYMPNGSLDRHVFPKES------------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 198 (373)
Q Consensus 131 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Ni 198 (373)
.....++||||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 171 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 171 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHhe
Confidence 99999999999999999999854321 123588899999999999999999998 999999999999
Q ss_pred eeeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCc
Q 048542 199 LLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATR 277 (373)
Q Consensus 199 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~ 277 (373)
+++.++.+||+|||.+................++..|+|||.+.+. .++.++|||||||++|+|++ |..||.....
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~el~~~g~~p~~~~~~- 248 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR--IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV- 248 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccC--CCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-
Confidence 9999999999999998755432221111222345689999988764 67889999999999999998 7778754321
Q ss_pred cccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 278 SSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
............... +...+..+.+|+.+||+.+|++|||+.++++.|+.+..
T Consensus 249 -------~~~~~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 249 -------EELFKLLKEGHRMDK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred -------HHHHHHHHcCCCCCC------CCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 112223333322221 12345688999999999999999999999999987643
No 125
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.8e-40 Score=297.12 Aligned_cols=259 Identities=23% Similarity=0.354 Sum_probs=208.2
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|++.+.||+|+||.||+|... +|+.+|+|.++... ...+.+.+|+.+++.++|+|++++++++......+++||
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 82 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEe
Confidence 4677899999999999999976 88999999886422 224678899999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++++|.+++......+..+++..+..++.+++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 159 (267)
T cd08224 83 LADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred cCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccCC
Confidence 9999999988855444456789999999999999999999998 9999999999999999999999999998755332
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.. ......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||....... .........+.....+
T Consensus 160 ~~--~~~~~~~~~~y~apE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~ 229 (267)
T cd08224 160 TT--AAHSLVGTPYYMSPERIHEN--GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL------YSLCKKIEKCDYPPLP 229 (267)
T ss_pred Cc--ccceecCCccccCHHHhccC--CCCchhcHHHHHHHHHHHHHCCCCcccCCccH------HHHHhhhhcCCCCCCC
Confidence 21 11234588899999998764 67889999999999999999999986443210 0111122222111111
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCC
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~ 342 (373)
...++..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus 230 -----~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 230 -----ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -----hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1245668899999999999999999999999998753
No 126
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3e-41 Score=311.76 Aligned_cols=252 Identities=21% Similarity=0.228 Sum_probs=200.2
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|++.+.||+|+||.||++..+ +++.||+|+++.... ....+.+|+.+++.++|+||+++++++.+....++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 3667899999999999999865 788999999986433 33567889999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++|+|.+++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 82 YQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 99999999988432 25689999999999999999999998 9999999999999999999999999999865433
Q ss_pred CCceeeecccCCCCcccccccccc----cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCC
Q 048542 221 NDFVSISATRGTIGYIAPELISRN----FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGD 296 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~----~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
... ......||+.|+|||.+... ...++.++|||||||++|+|++|..||....... ...........
T Consensus 156 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-------~~~~i~~~~~~ 227 (330)
T cd05601 156 KMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK-------TYNNIMNFQRF 227 (330)
T ss_pred Cce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH-------HHHHHHcCCCc
Confidence 322 22334689999999998631 2357789999999999999999999997543211 11111111111
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...+.. ..++..+.+|+..||+ +|.+|||++++++
T Consensus 228 ~~~~~~----~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 228 LKFPED----PKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred cCCCCC----CCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 122211 1245678999999998 9999999999885
No 127
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=5.4e-41 Score=314.31 Aligned_cols=254 Identities=20% Similarity=0.253 Sum_probs=202.0
Q ss_pred HHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEE
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAL 137 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 137 (373)
....|++.+.||+|+||.||++..+ +++.||+|++.... .....+.+|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3457788899999999999999866 68899999986532 223457789999999999999999999999999999
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
||||+++|+|.+++. +..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 121 v~Ey~~gg~L~~~l~-----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 121 VMEYMPGGDLVNLMS-----NYDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEcCCCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 999999999998873 23578888999999999999999998 9999999999999999999999999999765
Q ss_pred CCCCCceeeecccCCCCcccccccccc--cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhc-C
Q 048542 218 PKENDFVSISATRGTIGYIAPELISRN--FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK-G 294 (373)
Q Consensus 218 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~ 294 (373)
..... .......||+.|+|||.+.+. ...++.++|||||||++|+|++|..||...... . ....+.. .
T Consensus 193 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-------~-~~~~i~~~~ 263 (370)
T cd05596 193 DANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-------G-TYSKIMDHK 263 (370)
T ss_pred cCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH-------H-HHHHHHcCC
Confidence 43221 122345699999999998653 134788999999999999999999999754421 1 1122222 1
Q ss_pred CCcccCccchhhHHHHHHHHHHHHhhcCCCCCC--CCCHHHHHHH
Q 048542 295 GDLELQNVTEIESMIARKLCMIGLWCIQVKAAD--RPSMTKVLEM 337 (373)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~ell~~ 337 (373)
.....+.. ..++..+.+|+.+||+.+|.+ |||++++++.
T Consensus 264 ~~~~~~~~----~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 264 NSLTFPDD----IEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CcCCCCCc----CCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 12222221 134678899999999999987 9999999763
No 128
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.8e-41 Score=303.67 Aligned_cols=259 Identities=26% Similarity=0.395 Sum_probs=198.0
Q ss_pred hhhcccCCCCcEEEEEEEE-----cCCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeC--CeeEEE
Q 048542 68 HFTHKLGQGGFGSVYKGQL-----QTGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEG--SKRALV 138 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~~~lv 138 (373)
++.+.||+|+||+||++.. .++..||+|.++.... ....+.+|+.+++.++||||+++++++... ...+++
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 6778999999999988653 3577899999876533 346788999999999999999999987653 467899
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
|||+++++|.+++. ...+++..+..++.|++.|+.|||++ +++|+||||+||+++.++.++|+|||++....
T Consensus 87 ~e~~~~~~l~~~~~-----~~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 87 MEYVPLGSLRDYLP-----KHKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred ecCCCCCCHHHHHH-----HcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccC
Confidence 99999999998883 23589999999999999999999998 99999999999999999999999999988654
Q ss_pred CCCCcee-eecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccc-------ccchHHHHHH
Q 048542 219 KENDFVS-ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSK-------AYFPSWVYDQ 290 (373)
Q Consensus 219 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~-------~~~~~~~~~~ 290 (373)
....... .....++..|+|||.+.+. .++.++||||||+++|+|++|..|+......... ..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~--~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKEN--KFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhccc--CCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 3322111 1122356679999988654 6788999999999999999999997643321000 0000001111
Q ss_pred HhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCC
Q 048542 291 LNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342 (373)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~ 342 (373)
....... ..+..++..+.+++.+||+.+|++|||++++++.|+.+.
T Consensus 237 ~~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 237 LERGMRL------PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhcCCCC------CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1111111 112334568999999999999999999999999998753
No 129
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6.4e-41 Score=304.74 Aligned_cols=264 Identities=23% Similarity=0.379 Sum_probs=197.8
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEcC---------------CceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEe
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQT---------------GGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLL 126 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~~---------------~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~ 126 (373)
..+|++.+.||+|+||.||++.... ...||+|.+...... .+.+.+|+++++.++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3467888999999999999987542 124899998764322 35688999999999999999999
Q ss_pred eEeeeCCeeEEEEeccCcCCccccccCCCC--------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCe
Q 048542 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKES--------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 198 (373)
Q Consensus 127 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Ni 198 (373)
+++......++||||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++|+||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 999999999999999999999888743211 123478889999999999999999998 999999999999
Q ss_pred eeeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc--CCCCCCCCcC
Q 048542 199 LLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG--GRRNSNMNAT 276 (373)
Q Consensus 199 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~--g~~p~~~~~~ 276 (373)
+++.++.+||+|||++................++..|+|||.+.+. .++.++|+|||||++|+|++ +..||.....
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLG--KFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccC--CcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence 9999999999999998755433222112223456789999988654 68899999999999999998 4556554322
Q ss_pred ccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 277 RSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
... + ................ ..+...+..+.+|+.+||+.||++|||++++++.|+
T Consensus 239 ~~~---~-~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 239 EQV---I-ENTGEFFRNQGRQIYL---SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHH---H-HHHHHhhhhccccccC---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 110 0 0001111111111100 011123568999999999999999999999999986
No 130
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4e-41 Score=310.10 Aligned_cols=239 Identities=23% Similarity=0.283 Sum_probs=191.4
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCC-CceeeEeeEeeeCCeeEEEEe
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHH-VNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h-~ni~~~~~~~~~~~~~~lv~e 140 (373)
|++.+.||+|+||.||+|..+ +++.||+|++.... ...+.+..|..++..++| ++|+.+++++...+..|+|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 567799999999999999866 67789999987532 233567789999998876 468889999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++|+|.+++. ....+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~~g~L~~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 82 YVNGGDLMYHIQ----QVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred CCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 999999988873 345688999999999999999999998 9999999999999999999999999998643221
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.. ......||+.|+|||++.+. .++.++||||+||++|+|++|+.||...... .....+.... .
T Consensus 155 ~~--~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~~~~-~--- 218 (324)
T cd05587 155 GK--TTRTFCGTPDYIAPEIIAYQ--PYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--------ELFQSIMEHN-V--- 218 (324)
T ss_pred CC--ceeeecCCccccChhhhcCC--CCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCC-C---
Confidence 11 12345699999999999764 6788999999999999999999999754321 1112222211 1
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSM 331 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 331 (373)
..+..++..+.+++.+||+.||.+|++.
T Consensus 219 ---~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 219 ---SYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ---CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1123346678999999999999999986
No 131
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7.6e-41 Score=312.92 Aligned_cols=251 Identities=23% Similarity=0.274 Sum_probs=194.4
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|++.+.||+|+||+||+|... +++.||+|++..... ....+.+|+.++..++|+||+++++.+.+....|+|||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 3567789999999999999865 688999999975322 23567789999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++|+|.+++. +...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 82 FLPGGDMMTLLM----KKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred CCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 999999999883 345689999999999999999999998 9999999999999999999999999998754321
Q ss_pred CCc---------------------------------eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcC
Q 048542 221 NDF---------------------------------VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 267 (373)
Q Consensus 221 ~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g 267 (373)
... ......+||+.|+|||++.+. .++.++|||||||++|+|++|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~--~~~~~~DvwSlGvil~ell~G 232 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT--GYNKLCDWWSLGVIMYEMLIG 232 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC--CCCCchhhhhhHHHHHHHHhC
Confidence 100 001234699999999998764 688899999999999999999
Q ss_pred CCCCCCCcCccccccchHHHHHHHhcC-CCcccCccchhhHHHHHHHHHHHHhhcC--CCCCCCCCHHHHHHH
Q 048542 268 RRNSNMNATRSSKAYFPSWVYDQLNKG-GDLELQNVTEIESMIARKLCMIGLWCIQ--VKAADRPSMTKVLEM 337 (373)
Q Consensus 268 ~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~--~dp~~Rps~~ell~~ 337 (373)
..||...... .....+... .....+... .++..+.+++.+|+. .++..||+++|+++.
T Consensus 233 ~~Pf~~~~~~--------~~~~~i~~~~~~~~~p~~~----~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 233 YPPFCSETPQ--------ETYKKVMNWKETLIFPPEV----PISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCCCCHH--------HHHHHHHcCcCcccCCCcC----CCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 9999754321 122222221 112222111 235567788887554 233456899999874
No 132
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.2e-41 Score=309.88 Aligned_cols=240 Identities=24% Similarity=0.309 Sum_probs=192.9
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||.||+|..+ +++.||+|+++... .....+..|..++..+ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999876 67899999987542 2235567888888877 699999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|...+. +...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 81 ~~L~~~~~----~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 151 (318)
T cd05570 81 GDLMFHIQ----RSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV-- 151 (318)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC--
Confidence 99988773 345689999999999999999999998 999999999999999999999999999864322211
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......|+..|+|||.+.+. .++.++|+|||||++|+|++|+.||...... .....+.... . .
T Consensus 152 ~~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--------~~~~~i~~~~-~------~ 214 (318)
T cd05570 152 TTSTFCGTPDYIAPEILSYQ--PYGPAVDWWALGVLLYEMLAGQSPFEGDDED--------ELFQSILEDE-V------R 214 (318)
T ss_pred cccceecCccccCHHHhcCC--CCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--------HHHHHHHcCC-C------C
Confidence 12234589999999999764 7888999999999999999999999654321 1122222211 1 1
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCH-----HHHHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSM-----TKVLE 336 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~-----~ell~ 336 (373)
.+..++..+.+|+.+||+.||.+|||+ .++++
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 215 YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 123346688999999999999999999 88765
No 133
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.4e-40 Score=313.20 Aligned_cols=263 Identities=24% Similarity=0.410 Sum_probs=204.6
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC--HHHHHHHHHHhcccC-CCceeeEeeEeeeC
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS--AEEFINEVSTIGRIH-HVNVVQLLGFCSEG 132 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~ 132 (373)
+....+.+.++||+|+||.||+|++. ++..||+|+++..... .+.+.+|+.++..+. ||||+++++++...
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 34445667799999999999999854 3457999999764332 356889999999997 99999999999998
Q ss_pred CeeEEEEeccCcCCccccccCCCC--------------------------------------------------------
Q 048542 133 SKRALVYEYMPNGSLDRHVFPKES-------------------------------------------------------- 156 (373)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 156 (373)
...++||||+++|+|.+++.....
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 999999999999999888753211
Q ss_pred --------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCe
Q 048542 157 --------------------------------------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 198 (373)
Q Consensus 157 --------------------------------------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Ni 198 (373)
....+++..+..++.|++.||.|||+. +++||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceE
Confidence 113467778889999999999999998 999999999999
Q ss_pred eeeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCc
Q 048542 199 LLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATR 277 (373)
Q Consensus 199 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~ 277 (373)
|++.++.+||+|||++................++..|+|||.+.+. .++.++||||||+++|||++ |..||......
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNN--LYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred EEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCC--CCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 9999999999999999764332221112233467889999998764 67889999999999999998 88887643221
Q ss_pred cccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCC
Q 048542 278 SSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342 (373)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~ 342 (373)
......+..+..... +..++..+.+|+.+||+.+|.+||+++++++.|+.++
T Consensus 349 -------~~~~~~~~~~~~~~~------p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 349 -------EQFYNAIKRGYRMAK------PAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred -------HHHHHHHHcCCCCCC------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 112222333322221 1234568999999999999999999999999998753
No 134
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.1e-40 Score=306.60 Aligned_cols=261 Identities=25% Similarity=0.424 Sum_probs=203.7
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc--------CCceeEEEEeccCcc--CHHHHHHHHHHhccc-CCCceeeEeeEeeeC
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ--------TGGLIAVKMLENSKF--SAEEFINEVSTIGRI-HHVNVVQLLGFCSEG 132 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~ 132 (373)
..+|++.+.||+|+||.||+|... ++..+|+|.++.... ..+++.+|+.+++++ +||||+++++++..+
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 446788899999999999999742 123689998875432 236788999999999 799999999999999
Q ss_pred CeeEEEEeccCcCCccccccCCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeee
Q 048542 133 SKRALVYEYMPNGSLDRHVFPKES------------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILL 200 (373)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~ 200 (373)
...++++||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +++||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEE
Confidence 999999999999999988854321 234578889999999999999999998 99999999999999
Q ss_pred eCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccc
Q 048542 201 DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSS 279 (373)
Q Consensus 201 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~ 279 (373)
+.++.+||+|||+++...............++..|+|||.+.+. .++.++||||||+++|+|++ |..||......
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-- 243 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDR--VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-- 243 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccC--CcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH--
Confidence 99999999999998765433222222223345679999998764 67889999999999999998 77777543211
Q ss_pred cccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 280 KAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
.....+..+...... ..++..+.+++.+||+.+|.+|||+.++++.|+.+..
T Consensus 244 ------~~~~~~~~~~~~~~~------~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 244 ------ELFKLLKEGHRMDKP------ANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred ------HHHHHHHcCCCCCCC------CCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 122222222222211 2334578999999999999999999999999998763
No 135
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.4e-40 Score=299.96 Aligned_cols=257 Identities=25% Similarity=0.396 Sum_probs=201.1
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCc----eeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeE
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGG----LIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 136 (373)
...+++.+.||+|+||.||+|.+. ++. .||+|.++.... ....+.+|+.+++.++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 345667799999999999999854 444 489998875433 23678899999999999999999999875 4578
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
+++||+++|+|.+++... ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++..
T Consensus 85 l~~~~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 85 LVTQLMPYGCLLDYVREN---KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEcCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceee
Confidence 999999999999888432 34689999999999999999999998 999999999999999999999999999986
Q ss_pred CCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
..............++..|+|||...+. .++.++|||||||++|||++ |..||...... .....+..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~ 228 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHR--RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--------EIPDLLEKGE 228 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccC--CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHCCC
Confidence 6433322222233456789999998664 68889999999999999998 88887543221 1222233332
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
..... ..++..+.+++.+||+.||++||++.++++.|+.+..
T Consensus 229 ~~~~~------~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 229 RLPQP------PICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred cCCCC------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 22211 2345678999999999999999999999999987643
No 136
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.9e-41 Score=313.59 Aligned_cols=255 Identities=22% Similarity=0.276 Sum_probs=199.8
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeE
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 136 (373)
+....|++.+.||+|+||.||++..+ +++.+|+|++..... ....+.+|..+++.++||||+++++.+.++...+
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY 119 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 34467888899999999999999876 678999999864321 2345778999999999999999999999999999
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
+||||+++|+|.+++. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++..
T Consensus 120 lv~Ey~~gg~L~~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~ 191 (371)
T cd05622 120 MVMEYMPGGDLVNLMS-----NYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (371)
T ss_pred EEEcCCCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence 9999999999998873 23478888999999999999999998 999999999999999999999999999986
Q ss_pred CCCCCCceeeecccCCCCccccccccccc--CCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhc-
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRNF--GTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK- 293 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~- 293 (373)
...... .......||+.|+|||++.+.. +.++.++|||||||++|+|++|..||...... .....+..
T Consensus 192 ~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~~~~i~~~ 262 (371)
T cd05622 192 MNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSKIMNH 262 (371)
T ss_pred cCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH--------HHHHHHHcC
Confidence 543221 1223456999999999986542 24788999999999999999999999754321 11222222
Q ss_pred CCCcccCccchhhHHHHHHHHHHHHhhcCCCCCC--CCCHHHHHHH
Q 048542 294 GGDLELQNVTEIESMIARKLCMIGLWCIQVKAAD--RPSMTKVLEM 337 (373)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~ell~~ 337 (373)
......+. ...++..+.+++.+|++.++.+ |++++++++.
T Consensus 263 ~~~~~~~~----~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 263 KNSLTFPD----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCcccCCC----cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 11222221 1235677899999999844433 7799998874
No 137
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=8.9e-41 Score=301.49 Aligned_cols=257 Identities=24% Similarity=0.409 Sum_probs=200.7
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAL 137 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 137 (373)
..+.+.++||+|+||.||++... ++..+++|.+...... .+.+.+|+++++.++|+||+++++++.+....++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45567799999999999999642 3557899987754332 3678999999999999999999999999999999
Q ss_pred EEeccCcCCccccccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCce
Q 048542 138 VYEYMPNGSLDRHVFPKES-----------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIP 206 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~ 206 (373)
+|||+++++|.+++..... ....+++..+..++.|++.|++|||+. +++|+||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 9999999999988854321 113588899999999999999999998 99999999999999999999
Q ss_pred EEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchH
Q 048542 207 KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPS 285 (373)
Q Consensus 207 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~ 285 (373)
||+|||++................+++.|+|||.+.+. .++.++|||||||++|+|++ |..||.......
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------- 232 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR--KFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE------- 232 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccC--CcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH-------
Confidence 99999998755332221112223356789999988764 67889999999999999998 888886433211
Q ss_pred HHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 286 WVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
.......+..... +..++..+.+++.+||+.||.+||+++++++.|+.
T Consensus 233 -~~~~~~~~~~~~~------~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 233 -AIECITQGRELER------PRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred -HHHHHHcCccCCC------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1122222221111 12345678999999999999999999999999863
No 138
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=4.4e-41 Score=316.21 Aligned_cols=250 Identities=24% Similarity=0.281 Sum_probs=194.8
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|.+.+.||+|+||.||++..+ +++.||||++..... ..+.+.+|+.+++.++||||+++++++.++...|+|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 3567799999999999999865 788999999865322 23567889999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++|+|.+++. ....+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~----~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 82 FLPGGDLMTMLI----KYDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred CCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 999999998883 345688999999999999999999998 9999999999999999999999999998632110
Q ss_pred CCc------------e---------------------------------eeecccCCCCcccccccccccCCcCcccchH
Q 048542 221 NDF------------V---------------------------------SISATRGTIGYIAPELISRNFGTVSCKSDVY 255 (373)
Q Consensus 221 ~~~------------~---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~s~~~Dvw 255 (373)
... . ......||+.|+|||++.+. .++.++|||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Diw 232 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ--GYGQECDWW 232 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC--CCCCceeeE
Confidence 000 0 00123589999999998764 788999999
Q ss_pred HHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhc-CCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCC---CCH
Q 048542 256 GFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK-GGDLELQNVTEIESMIARKLCMIGLWCIQVKAADR---PSM 331 (373)
Q Consensus 256 slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R---ps~ 331 (373)
||||++|+|++|..||....... ....+.. .....++.. ..++..+.+|+.+|++ +|.+| +|+
T Consensus 233 SlGvil~elltG~~Pf~~~~~~~--------~~~~i~~~~~~~~~p~~----~~~s~~~~dli~~lL~-~~~~r~~r~~~ 299 (377)
T cd05629 233 SLGAIMFECLIGWPPFCSENSHE--------TYRKIINWRETLYFPDD----IHLSVEAEDLIRRLIT-NAENRLGRGGA 299 (377)
T ss_pred ecchhhhhhhcCCCCCCCCCHHH--------HHHHHHccCCccCCCCC----CCCCHHHHHHHHHHhc-CHhhcCCCCCH
Confidence 99999999999999996543211 1111111 111222211 1245678999999998 77765 599
Q ss_pred HHHHHH
Q 048542 332 TKVLEM 337 (373)
Q Consensus 332 ~ell~~ 337 (373)
.++++.
T Consensus 300 ~~~l~h 305 (377)
T cd05629 300 HEIKSH 305 (377)
T ss_pred HHHhcC
Confidence 998764
No 139
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.2e-41 Score=301.71 Aligned_cols=251 Identities=29% Similarity=0.462 Sum_probs=198.7
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHH---HHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~---~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|++.+.||+|+||+||++... +++.+|+|++......... ..+|+.+++.++||||+++++++.+....+++||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567899999999999999977 5668999999887654433 345999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++. ....+++..+..++.|+++||.+||+. +++|+||||+||+++.++.++|+|||.+..... .
T Consensus 81 ~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~--~ 151 (260)
T PF00069_consen 81 PGGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSE--N 151 (260)
T ss_dssp TTEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTS--T
T ss_pred cccccccccc----ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc--c
Confidence 9999998884 356689999999999999999999998 999999999999999999999999999875421 1
Q ss_pred ceeeecccCCCCcccccccc-cccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 223 FVSISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~-~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
........++..|+|||.+. + ...+.++|+||+|+++|+|++|..||.......................
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~------- 222 (260)
T PF00069_consen 152 NENFNPFVGTPEYMAPEVLQQG--KKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSS------- 222 (260)
T ss_dssp TSEBSSSSSSGGGSCHHHHTTT--SSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHH-------
T ss_pred cccccccccccccccccccccc--ccccccccccccccccccccccccccccccchhhhhhhhhccccccccc-------
Confidence 12334566899999999987 3 3788899999999999999999999986621111111100000000000
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..........+.+++.+||+.||++|||++++++
T Consensus 223 -~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 223 -SQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp -TTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred -ccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000011268999999999999999999999985
No 140
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=9.6e-41 Score=312.38 Aligned_cols=254 Identities=20% Similarity=0.257 Sum_probs=200.2
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEE
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 138 (373)
...|++.+.||+|+||.||++..+ +++.+|+|++.... .....+.+|+.+++.++||||+++++++.++...++|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 456788899999999999999976 67899999986522 2234577899999999999999999999999999999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
|||+++|+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 122 ~Ey~~gg~L~~~l~-----~~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 122 MEYMPGGDLVNLMS-----NYDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EcCCCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 99999999999883 23578889999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCceeeecccCCCCccccccccccc--CCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCC
Q 048542 219 KENDFVSISATRGTIGYIAPELISRNF--GTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGD 296 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
... ........||+.|+|||++.+.. +.++.++|+||+||++|+|++|..||...... ............
T Consensus 194 ~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~-------~~~~~i~~~~~~ 265 (370)
T cd05621 194 ETG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV-------GTYSKIMDHKNS 265 (370)
T ss_pred cCC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCcc
Confidence 322 12233556999999999986542 24778999999999999999999999754321 111122222222
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCC--CCCHHHHHHH
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAAD--RPSMTKVLEM 337 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~ell~~ 337 (373)
...+.. ..++..+.+++..|++.++.+ |+|++|+++.
T Consensus 266 ~~~p~~----~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 266 LNFPED----VEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred cCCCCc----ccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 222211 234667889999999865543 8899999875
No 141
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.4e-41 Score=323.00 Aligned_cols=261 Identities=19% Similarity=0.250 Sum_probs=191.3
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeC--------Cee
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEG--------SKR 135 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--------~~~ 135 (373)
..|++.+.||+|+||.||+|... +++.||||.+.... ....+|+.+++.++||||+++++++... ...
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence 35778899999999999999865 68899999886543 2335799999999999999998876332 246
Q ss_pred EEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC-ceEEeeccCc
Q 048542 136 ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF-IPKVSDFGLA 214 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~-~~kl~Dfg~~ 214 (373)
++||||+++ +|.+++......+..+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||++
T Consensus 143 ~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla 218 (440)
T PTZ00036 143 NVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSA 218 (440)
T ss_pred EEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccc
Confidence 789999965 67666644334456799999999999999999999998 999999999999998654 7999999999
Q ss_pred ccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc-------hHHH
Q 048542 215 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF-------PSWV 287 (373)
Q Consensus 215 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~-------~~~~ 287 (373)
........ .....||+.|+|||++.+. ..++.++||||+||++|+|++|..||............ ....
T Consensus 219 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~ 294 (440)
T PTZ00036 219 KNLLAGQR---SVSYICSRFYRAPELMLGA-TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQ 294 (440)
T ss_pred hhccCCCC---cccCCCCcCccCHHHhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 86543322 1234689999999988653 36788999999999999999999999765422110000 0000
Q ss_pred HHHHhcC-CCcccCc--c----chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 288 YDQLNKG-GDLELQN--V----TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 288 ~~~~~~~-~~~~~~~--~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
....... ....++. . ..++...+.++.+|+.+||+.||.+|||+.|+++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 295 LKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 0000000 0000010 0 1112234568999999999999999999999874
No 142
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.2e-40 Score=301.19 Aligned_cols=263 Identities=25% Similarity=0.384 Sum_probs=200.8
Q ss_pred HHhhhhcccCCCCcEEEEEEEEcC-----------------CceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQT-----------------GGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQL 125 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~~-----------------~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~ 125 (373)
..|++.+.||+|+||.||+|.... +..||+|.+..... ..+.+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 456788999999999999997542 23589999876543 24678899999999999999999
Q ss_pred eeEeeeCCeeEEEEeccCcCCccccccCCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCe
Q 048542 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKES-------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 198 (373)
Q Consensus 126 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Ni 198 (373)
++++..+...+++|||+++++|.+++..... ....+++..++.++.|++.||+|||+. +++|+||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhce
Confidence 9999999999999999999999988854321 123689999999999999999999998 999999999999
Q ss_pred eeeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc--CCCCCCCCcC
Q 048542 199 LLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG--GRRNSNMNAT 276 (373)
Q Consensus 199 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~--g~~p~~~~~~ 276 (373)
+++.++.++|+|||++................++..|+|||.+.+. .++.++|||||||++|+|++ +..||.....
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLG--KFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcC--CCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 9999999999999998765433322222334467789999998764 68889999999999999998 5566643321
Q ss_pred ccccccchHHHHHHHhcC-CCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 277 RSSKAYFPSWVYDQLNKG-GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
.......... ...........+..++.++.+++.+||+.||.+|||+.++++.|+.
T Consensus 240 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 240 --------QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred --------HHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 1111111111 0000000011122345689999999999999999999999999863
No 143
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1e-40 Score=304.62 Aligned_cols=262 Identities=23% Similarity=0.413 Sum_probs=205.8
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEEEc--------CCceeEEEEeccCc--cCHHHHHHHHHHhccc-CCCceeeEeeEee
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQLQ--------TGGLIAVKMLENSK--FSAEEFINEVSTIGRI-HHVNVVQLLGFCS 130 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~ 130 (373)
+....|.+.+.||+|+||.||+|... ++..+|+|.+.... ....++.+|+.+++.+ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 44567788899999999999999641 23479999887543 2236788999999999 8999999999999
Q ss_pred eCCeeEEEEeccCcCCccccccCCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCe
Q 048542 131 EGSKRALVYEYMPNGSLDRHVFPKES------------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 198 (373)
Q Consensus 131 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Ni 198 (373)
.....+++|||+++++|.+++..... ....+++..+..++.|+++||.|||++ +++||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence 99999999999999999998854321 123578888999999999999999998 999999999999
Q ss_pred eeeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCc
Q 048542 199 LLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATR 277 (373)
Q Consensus 199 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~ 277 (373)
+++.++.+||+|||++................++..|+|||.+.+. .++.++||||||+++|+|++ |..||.....
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~- 245 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDR--VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV- 245 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccC--CCCchhhHHHHHHHHHHHHcCCCCCcccCCH-
Confidence 9999999999999999866443322222333466789999998764 67889999999999999998 6777753321
Q ss_pred cccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCC
Q 048542 278 SSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342 (373)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~ 342 (373)
.........+..... +..++..+.+++.+||+.+|++|||+.++++.|+.+.
T Consensus 246 -------~~~~~~~~~~~~~~~------~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 246 -------EELFKLLKEGHRMDK------PANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred -------HHHHHHHHcCCcCCC------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 112233333322211 1234567899999999999999999999999998754
No 144
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=8.7e-42 Score=313.68 Aligned_cols=237 Identities=24% Similarity=0.320 Sum_probs=191.4
Q ss_pred cccCCCCcEEEEEEEE----cCCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 71 HKLGQGGFGSVYKGQL----QTGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~----~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
+.||+|+||.||++.. .+|+.+|+|++..... ....+.+|+.+++.++||||+++++++..+...|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 3678999999976432 23456789999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++. +...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~- 153 (318)
T cd05582 82 GGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK- 153 (318)
T ss_pred CCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-
Confidence 999988873 345689999999999999999999998 999999999999999999999999999875433221
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
......|++.|+|||.+.+. .++.++|||||||++|+|++|+.||...... .....+.... .
T Consensus 154 -~~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tg~~p~~~~~~~--------~~~~~i~~~~-~------ 215 (318)
T cd05582 154 -KAYSFCGTVEYMAPEVVNRR--GHTQSADWWSFGVLMFEMLTGSLPFQGKDRK--------ETMTMILKAK-L------ 215 (318)
T ss_pred -ceecccCChhhcCHHHHcCC--CCCCccceeccceEeeeeccCCCCCCCCCHH--------HHHHHHHcCC-C------
Confidence 12345689999999998764 6788999999999999999999999754321 1111121111 1
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHH
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTK 333 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~e 333 (373)
..+..++..+.+|+.+||+.||++||++.+
T Consensus 216 ~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 122334667899999999999999999544
No 145
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.4e-40 Score=303.57 Aligned_cols=260 Identities=25% Similarity=0.436 Sum_probs=203.1
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc--------CCceeEEEEeccCccC--HHHHHHHHHHhccc-CCCceeeEeeEeeeCC
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ--------TGGLIAVKMLENSKFS--AEEFINEVSTIGRI-HHVNVVQLLGFCSEGS 133 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~ 133 (373)
.++.+.+.||+|+||.||++... .+..+|+|.++..... ..++.+|+.+++.+ +||||+++++++....
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46678899999999999999742 2456899998754332 35688999999999 6999999999999989
Q ss_pred eeEEEEeccCcCCccccccCCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeee
Q 048542 134 KRALVYEYMPNGSLDRHVFPKES------------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD 201 (373)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~ 201 (373)
..+++|||+++|+|.+++..... ....+++..+..++.|++.||.|||++ +++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEc
Confidence 99999999999999998854321 234588999999999999999999998 999999999999999
Q ss_pred CCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCcccc
Q 048542 202 HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSK 280 (373)
Q Consensus 202 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~ 280 (373)
.++.+||+|||++................++..|+|||.+.+. .++.++||||||+++|+|++ |..||.....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~el~~~g~~p~~~~~~---- 242 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDR--VYTHQSDVWSFGILMWEIFTLGGSPYPGIPV---- 242 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccC--CcCccchhhHHHHHHHHHHhCCCCCCCCCCH----
Confidence 9999999999999765432221111222345679999998764 68889999999999999999 7888754322
Q ss_pred ccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 281 AYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
.........+..... +..++..+.+++.+||+.+|++|||+.++++.|.....
T Consensus 243 ----~~~~~~~~~~~~~~~------~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 243 ----EELFKLLREGHRMDK------PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred ----HHHHHHHHcCCCCCC------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 112223333222221 12335578899999999999999999999999998653
No 146
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.1e-40 Score=307.40 Aligned_cols=239 Identities=25% Similarity=0.302 Sum_probs=187.9
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHH-HhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVS-TIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~-~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||.||+|... +|+.+|+|++..... ....+..|.. +++.++||||+++++.+..+...++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46899999999999865 788999999875322 2234455554 46778999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|+|...+. ....+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++........
T Consensus 81 ~~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-- 151 (325)
T cd05604 81 GELFFHLQ----RERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD-- 151 (325)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC--
Confidence 99987773 345689999999999999999999998 999999999999999999999999999874322111
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......||+.|+|||.+.+. .++.++|||||||++|+|++|..||....... ......... ..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--------~~~~~~~~~-~~------ 214 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIRKQ--PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE--------MYDNILHKP-LV------ 214 (325)
T ss_pred CcccccCChhhCCHHHHcCC--CCCCcCccccccceehhhhcCCCCCCCCCHHH--------HHHHHHcCC-cc------
Confidence 12345699999999998764 67889999999999999999999997543211 112222211 11
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHHHHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMTKVL 335 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ell 335 (373)
.+...+..+.+++.+|++.+|.+||++.+.+
T Consensus 215 ~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 215 LRPGASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred CCCCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 1122456788999999999999999886433
No 147
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.7e-40 Score=299.54 Aligned_cols=261 Identities=24% Similarity=0.399 Sum_probs=202.2
Q ss_pred HHHHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCe
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSK 134 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 134 (373)
...+|++.+.||+|+||.||+|..+ .+..||+|.+...... ...+.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3457788899999999999999753 2447999988754432 2467889999999999999999999999999
Q ss_pred eEEEEeccCcCCccccccCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEE
Q 048542 135 RALVYEYMPNGSLDRHVFPKES------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKV 208 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl 208 (373)
.+++|||+++|+|.+++..... .....++..+..++.|++.||.|||++ +++||||||+||+++.++.++|
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEE
Confidence 9999999999999999853221 123456778889999999999999998 9999999999999999999999
Q ss_pred eeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHH
Q 048542 209 SDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWV 287 (373)
Q Consensus 209 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~ 287 (373)
+|||+++...............++..|+|||.+.+. .++.++|+|||||++|+|++ |..||...... . .
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~--~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-------~-~ 230 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG--VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-------Q-V 230 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccC--CCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH-------H-H
Confidence 999998755332221111223356789999998764 67889999999999999998 67777543321 1 2
Q ss_pred HHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCC
Q 048542 288 YDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~ 342 (373)
......+...... ...+..+.+++.+||+.||++|||+.++++.|+..+
T Consensus 231 ~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 231 LKFVMDGGYLDQP------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHHcCCCCCCC------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 2222222222211 123467999999999999999999999999999754
No 148
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.3e-40 Score=297.01 Aligned_cols=256 Identities=25% Similarity=0.388 Sum_probs=191.9
Q ss_pred cccCCCCcEEEEEEEEc---CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 71 HKLGQGGFGSVYKGQLQ---TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~---~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
+.||+|+||.||+|... ++..+|+|.++..... ...+.+|+.+++.++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 36899999999999865 3457999988765432 246888999999999999999999999988999999999999
Q ss_pred CccccccCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 146 SLDRHVFPKES-RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 146 sL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
+|.+++..... .....++..+..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||++..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99988854322 223466778888999999999999998 99999999999999999999999999987543332222
Q ss_pred eeecccCCCCcccccccccccC-----CcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 225 SISATRGTIGYIAPELISRNFG-----TVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~-----~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
......++..|+|||.+.+..+ .++.++|+||||+++|+|++ |..||....... ............
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--------~~~~~~~~~~~~ 229 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ--------VLTYTVREQQLK 229 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH--------HHHHHhhcccCC
Confidence 2223457788999999864311 35779999999999999996 999986543221 101111111111
Q ss_pred cCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 299 LQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 299 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
... .......+..+.+++..|| .+|++|||+++|++.|+
T Consensus 230 ~~~-~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPK-PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCC-CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 110 1111123456788999999 68999999999999875
No 149
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.6e-40 Score=296.59 Aligned_cols=255 Identities=24% Similarity=0.429 Sum_probs=205.1
Q ss_pred HHHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
...++++.++||+|+||.||++...++..+++|.+.......+.+.+|+.+++.++|+||+++++++.. ...+++|||+
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 345678889999999999999998778889999988766566788999999999999999999999877 7789999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++... .+..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||.+.......
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~- 156 (260)
T cd05073 83 AKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE- 156 (260)
T ss_pred CCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCC-
Confidence 999999988432 245678889999999999999999998 99999999999999999999999999987553322
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
........++..|+|||.+.+. .++.++|+||||+++|++++ |..||....... .......+.....
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--------~~~~~~~~~~~~~-- 224 (260)
T cd05073 157 YTAREGAKFPIKWTAPEAINFG--SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--------VIRALERGYRMPR-- 224 (260)
T ss_pred cccccCCcccccccCHhHhccC--CcCccccchHHHHHHHHHHhcCCCCCCCCCHHH--------HHHHHhCCCCCCC--
Confidence 1112233456789999998654 67889999999999999998 888886443211 1122222221111
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 225 ----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 225 ----PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ----cccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 12345678999999999999999999999999975
No 150
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.2e-40 Score=304.83 Aligned_cols=261 Identities=23% Similarity=0.333 Sum_probs=196.5
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
+|.+.+.||+|+||.||+|..+ +++.+|+|.++.... ....+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 7 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 86 (309)
T cd07872 7 TYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYL 86 (309)
T ss_pred ceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCC
Confidence 5677899999999999999866 678899999875432 2356778999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++ +|.+++.. .+..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 87 ~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 87 DK-DLKQYMDD---CGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred CC-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 65 77766632 234578899999999999999999998 999999999999999999999999999875433221
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc-------hHHHHHHHhc--
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF-------PSWVYDQLNK-- 293 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~-------~~~~~~~~~~-- 293 (373)
......++..|+|||.+.+. ..++.++||||+||++|+|++|+.||............ ....+.....
T Consensus 160 --~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 160 --TYSNEVVTLWYRPPDVLLGS-SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND 236 (309)
T ss_pred --ccccccccccccCCHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchh
Confidence 12234578899999988653 35788999999999999999999999765432110000 0000000000
Q ss_pred ----CCCcccC--ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 ----GGDLELQ--NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 ----~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
....... ........++..+.+|+.+||+.||.+|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000000 000111235667899999999999999999999987
No 151
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.9e-40 Score=298.88 Aligned_cols=257 Identities=27% Similarity=0.409 Sum_probs=199.7
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCee
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKR 135 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 135 (373)
...+.+.+.||+|++|.||+|.+. .+..|++|.+...... ...+.+|+.+++.++|+||+++++++.+....
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 345677899999999999999865 3567899988654332 35688999999999999999999999888899
Q ss_pred EEEEeccCcCCccccccCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC---ceEEe
Q 048542 136 ALVYEYMPNGSLDRHVFPKES---RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF---IPKVS 209 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~---~~kl~ 209 (373)
+++|||+++++|.+++..... ....+++..+..++.|++.||+|||++ +++|+||||+||+++.++ .+||+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEec
Confidence 999999999999998844321 123588999999999999999999998 999999999999998654 58999
Q ss_pred eccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHH
Q 048542 210 DFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVY 288 (373)
Q Consensus 210 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~ 288 (373)
|||++.................+..|+|||.+.+. .++.++|||||||++|+|++ |..||....... ..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--------~~ 231 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDG--IFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--------VM 231 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcC--CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--------HH
Confidence 99999865332211111122345679999998654 78899999999999999997 888886543211 12
Q ss_pred HHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 289 DQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
........... +..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus 232 ~~~~~~~~~~~------~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 232 EFVTGGGRLDP------PKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHcCCcCCC------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 22222222221 2234567899999999999999999999999886
No 152
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.2e-40 Score=307.20 Aligned_cols=242 Identities=21% Similarity=0.307 Sum_probs=191.2
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||.||+|... +++.+|+|+++.... ..+.+.+|..++..+ +||||+.+++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 678899999986432 234577899998888 699999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|+|...+. ....+++..+..++.|++.||+|||++ +++||||||+|||++.++.+||+|||++........
T Consensus 81 ~~L~~~~~----~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-- 151 (327)
T cd05617 81 GDLMFHMQ----RQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD-- 151 (327)
T ss_pred CcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC--
Confidence 99987773 335699999999999999999999998 999999999999999999999999999874322211
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......||+.|+|||.+.+. .++.++|||||||++|+|++|..||.......... ...+......... . .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~-~------~ 221 (327)
T cd05617 152 TTSTFCGTPNYIAPEILRGE--EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMN-TEDYLFQVILEKP-I------R 221 (327)
T ss_pred ceecccCCcccCCHHHHCCC--CCCchheeehhHHHHHHHHhCCCCCCccCCCcccc-cHHHHHHHHHhCC-C------C
Confidence 12345699999999998764 77889999999999999999999996543222111 1122222222211 1 1
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSM 331 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~ 331 (373)
.+..++..+.+++.+||+.||++||++
T Consensus 222 ~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 222 IPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 223345678999999999999999984
No 153
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.5e-40 Score=297.81 Aligned_cols=255 Identities=23% Similarity=0.281 Sum_probs=199.6
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
..|++.+.||+|+||.||+|... +++.+|+|++..... ....+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 46778899999999999999964 678999999875433 3356788999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++. ....+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 89 ~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06646 89 GGGSLQDIYH----VTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA 161 (267)
T ss_pred CCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence 9999988873 235688999999999999999999998 999999999999999999999999999976532211
Q ss_pred ceeeecccCCCCcccccccccc-cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 223 FVSISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~-~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
......++..|+|||.+.+. ...++.++|+||+||++|+|++|..||.......... ..... ......
T Consensus 162 --~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~--------~~~~~-~~~~~~ 230 (267)
T cd06646 162 --KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--------LMSKS-NFQPPK 230 (267)
T ss_pred --ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe--------eeecC-CCCCCC
Confidence 11234588899999987532 2356789999999999999999999986443211100 00000 001000
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEML 338 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L 338 (373)
......++..+.+++.+||+.+|++|||++++++.|
T Consensus 231 -~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 231 -LKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -CccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 011123467899999999999999999999998743
No 154
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.4e-40 Score=299.78 Aligned_cols=247 Identities=25% Similarity=0.333 Sum_probs=193.2
Q ss_pred cCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 73 ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
||+|+||.||++..+ +|+.||+|.+..... ....+..|+++++.++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999865 689999999865322 123456799999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeee
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 227 (373)
.+.+... ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~ 152 (277)
T cd05607 81 KYHIYNV--GERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TIT 152 (277)
T ss_pred HHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eee
Confidence 8777432 234588899999999999999999998 99999999999999999999999999987654322 223
Q ss_pred cccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhH
Q 048542 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIES 307 (373)
Q Consensus 228 ~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
...|+..|+|||.+.+. .++.++||||+||++|+|++|+.||......... ..+........ ... ...
T Consensus 153 ~~~~~~~y~aPE~~~~~--~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~-~~~-----~~~ 220 (277)
T cd05607 153 QRAGTNGYMAPEILKEE--PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK----EELKRRTLEDE-VKF-----EHQ 220 (277)
T ss_pred ccCCCCCccCHHHHccC--CCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhH----HHHHHHhhccc-ccc-----ccc
Confidence 45689999999998765 5888999999999999999999998754321110 01111111110 000 012
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 308 MIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 308 ~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
.++..+.+|+.+||+.||++||++.|+++.+.
T Consensus 221 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 221 NFTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred cCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 35667899999999999999999987764443
No 155
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.9e-40 Score=300.48 Aligned_cols=259 Identities=26% Similarity=0.417 Sum_probs=204.0
Q ss_pred HHHHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC--HHHHHHHHHHhccc-CCCceeeEeeEeeeCC
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS--AEEFINEVSTIGRI-HHVNVVQLLGFCSEGS 133 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~ 133 (373)
....+.+.+.||+|+||.||++... ++..+|+|.++..... .+.+.+|+.+++++ +||||+++++++....
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 3456778899999999999999742 3457999988764332 35688999999999 7999999999999999
Q ss_pred eeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccC
Q 048542 134 KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGL 213 (373)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~ 213 (373)
..+++|||+++++|.+++.... ...+++..+..++.|++.||+|||++ +++|+||||+||+++.++.++|+|||+
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKR--ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcc
Confidence 9999999999999998884322 23489999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHh
Q 048542 214 AKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLN 292 (373)
Q Consensus 214 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 292 (373)
+................++..|+|||.+.+. .++.++||||+||++|+|++ |..||....... .......
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-------~~~~~~~ 258 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNC--VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-------KFYKLIK 258 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccC--CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-------HHHHHHH
Confidence 9865443322222233467789999988664 67889999999999999998 888886543211 1122222
Q ss_pred cCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 293 KGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
.+..... +...+..+.+++.+||+.+|++|||+.++++.|+..
T Consensus 259 ~~~~~~~------~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 259 EGYRMAQ------PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred cCCcCCC------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 2221111 112346789999999999999999999999999864
No 156
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.9e-41 Score=317.39 Aligned_cols=251 Identities=24% Similarity=0.259 Sum_probs=195.0
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|++.+.||+|+||.||+|+.. +++.||+|++.... .....+.+|+.+++.++|+||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 3677899999999999999865 68899999987532 233567889999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~~g~L~~~i~----~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 82 YIPGGDMMSLLI----RLGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred CCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 999999999883 235688899999999999999999998 9999999999999999999999999997532100
Q ss_pred CC-----------------------------------------ceeeecccCCCCcccccccccccCCcCcccchHHHHH
Q 048542 221 ND-----------------------------------------FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGM 259 (373)
Q Consensus 221 ~~-----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~ 259 (373)
.. ........||+.|+|||++.+. .++.++|||||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGv 232 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRT--GYTQLCDWWSVGV 232 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCC--CCCcceeeeeccc
Confidence 00 0001134699999999999765 6788999999999
Q ss_pred HHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCC---CHHHHHH
Q 048542 260 VLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRP---SMTKVLE 336 (373)
Q Consensus 260 ~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~ell~ 336 (373)
++|+|++|+.||....... ..............+.. ..++..+.+++.+|+ .+|.+|+ |+.++++
T Consensus 233 ilyell~G~~Pf~~~~~~~-------~~~~i~~~~~~~~~~~~----~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 233 ILYEMLVGQPPFLADTPAE-------TQLKVINWETTLHIPSQ----AKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred eeeehhhCCCCCCCCCHHH-------HHHHHhccCccccCCCC----CCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 9999999999997654321 11111111111111111 124567788888876 5999999 8888875
Q ss_pred H
Q 048542 337 M 337 (373)
Q Consensus 337 ~ 337 (373)
.
T Consensus 301 h 301 (376)
T cd05598 301 H 301 (376)
T ss_pred C
Confidence 4
No 157
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=313.08 Aligned_cols=252 Identities=30% Similarity=0.453 Sum_probs=216.5
Q ss_pred hhcccCCCCcEEEEEEEEcC-CceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 69 FTHKLGQGGFGSVYKGQLQT-GGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 69 ~~~~ig~G~~g~V~~~~~~~-~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
..++||-|.||.||.|.|+. .-.||||.++.+.+..++|+.|..+|+.++|||+|+++|+|..+..+|||+|||..|+|
T Consensus 271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNL 350 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNL 350 (1157)
T ss_pred eeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccH
Confidence 34899999999999999873 55799999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeee
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 227 (373)
.+++... ....++....+.++.||+.|+.||..+ +++||||..+|+|+.++..+|++|||+++++..+ .+....
T Consensus 351 LdYLRec--nr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD-TYTAHA 424 (1157)
T KOG4278|consen 351 LDYLREC--NRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD-TYTAHA 424 (1157)
T ss_pred HHHHHHh--chhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCC-ceeccc
Confidence 9999543 234577788899999999999999998 9999999999999999999999999999987644 333334
Q ss_pred cccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhh
Q 048542 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIE 306 (373)
Q Consensus 228 ~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (373)
+..-+..|.|||.+.- ..++.|+|||+||++|||+.| |-.||..-+. ..++..++++.+.+-+
T Consensus 425 GAKFPIKWTAPEsLAy--NtFSiKSDVWAFGVLLWEIATYGMsPYPGidl--------SqVY~LLEkgyRM~~P------ 488 (1157)
T KOG4278|consen 425 GAKFPIKWTAPESLAY--NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--------SQVYGLLEKGYRMDGP------ 488 (1157)
T ss_pred CccCcccccCcccccc--cccccchhhHHHHHHHHHHHhcCCCCCCCccH--------HHHHHHHhccccccCC------
Confidence 4556778999998854 489999999999999999997 6677765432 4477888888766544
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCC
Q 048542 307 SMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342 (373)
Q Consensus 307 ~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~ 342 (373)
..++..+.+||+.||+++|.+||++.|+-+.++.+.
T Consensus 489 eGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 489 EGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred CCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 345678999999999999999999999998888654
No 158
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.6e-40 Score=305.97 Aligned_cols=236 Identities=26% Similarity=0.333 Sum_probs=187.1
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHH-HhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVS-TIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~-~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||+||+|..+ +|+.||+|++..... ....+..|.. +++.++||||+++++.+.+....++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46899999999999976 788999999875322 2234455544 56778999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|+|.+++. ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++........
T Consensus 81 g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~-- 151 (323)
T cd05575 81 GELFFHLQ----RERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK-- 151 (323)
T ss_pred CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC--
Confidence 99988873 345688999999999999999999998 999999999999999999999999999874322211
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......||+.|+|||.+.+. .++.++|||||||++|+|++|..||....... ......... . .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--------~~~~i~~~~-~------~ 214 (323)
T cd05575 152 TTSTFCGTPEYLAPEVLRKQ--PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE--------MYDNILNKP-L------R 214 (323)
T ss_pred ccccccCChhhcChhhhcCC--CCCccccccccchhhhhhhcCCCCCCCCCHHH--------HHHHHHcCC-C------C
Confidence 12345689999999998764 68889999999999999999999997543211 112221111 1 1
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMT 332 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ 332 (373)
.+..++..+.+++.+||+.||.+||++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 215 LKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 1123466789999999999999999984
No 159
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.7e-40 Score=315.15 Aligned_cols=258 Identities=20% Similarity=0.224 Sum_probs=195.5
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
..|.+.+.||+|+||.||+|.+. +++.||||.... ..+.+|+.++++++|+||+++++++..+...+++||++.
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence 35778899999999999999876 578899995432 345789999999999999999999999999999999994
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
++|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 244 -~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 244 -SDLYTYLGA---RLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316 (461)
T ss_pred -CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence 688777632 234689999999999999999999998 9999999999999999999999999999765432221
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCc--ccCc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL--ELQN 301 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 301 (373)
.......||..|+|||++.+. .++.++|||||||++|||++|..|+...............+...+...... .+..
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~--~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGD--PYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred ccccccCCCcCCcCHHHHcCC--CCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 122245699999999999765 688899999999999999998876644332222222222222222221100 0000
Q ss_pred -----------------------cchhh--HHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 302 -----------------------VTEIE--SMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 302 -----------------------~~~~~--~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..... ..++..+.+|+.+||+.||.+|||+.|+++
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 00000 123347889999999999999999999987
No 160
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-40 Score=313.08 Aligned_cols=262 Identities=21% Similarity=0.213 Sum_probs=199.3
Q ss_pred HHHHHHhhhhcccCCCCcEEEEEEEEc---CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEE
Q 048542 61 QIIAMTNHFTHKLGQGGFGSVYKGQLQ---TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAL 137 (373)
Q Consensus 61 ~i~~~~~~~~~~ig~G~~g~V~~~~~~---~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 137 (373)
.+...+|++.+.||+|+||.||+|... ++..||+|.+.... ...+|+.+++.++||||+++++++......++
T Consensus 88 ~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~----~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 88 SVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK----TPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred hhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc----cHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 344556888999999999999999753 45689999876542 34579999999999999999999999999999
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
+||++. ++|.+++ .....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++|+|||++...
T Consensus 164 v~e~~~-~~l~~~l----~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 164 VMPKYK-CDLFTYV----DRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EehhcC-CCHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 999995 5787777 2346789999999999999999999998 9999999999999999999999999999765
Q ss_pred CCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHH------
Q 048542 218 PKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQL------ 291 (373)
Q Consensus 218 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~------ 291 (373)
.............||..|+|||.+.+. .++.++|||||||++|+|++|+.||...........+.. +...+
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~-i~~~~~~~~~~ 312 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALD--PYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRS-IIRCMQVHPLE 312 (392)
T ss_pred CcccccccccccccccCccCHhHhcCC--CCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHH-HHHHhccCccc
Confidence 443332223345699999999998764 788899999999999999999999976543221110000 00000
Q ss_pred ----------------hcCCCcccCccch-hhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 292 ----------------NKGGDLELQNVTE-IESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 292 ----------------~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
............. ....++.++.+++.+||+.||++|||+.|++..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 313 FPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000000000 001234578899999999999999999999874
No 161
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=5.6e-40 Score=292.17 Aligned_cols=251 Identities=28% Similarity=0.485 Sum_probs=203.3
Q ss_pred HHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
..+++.+.||.|+||.||++.+.++..+|+|.+........++.+|+.+++.++|||++++++++......+++|||+++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 35667899999999999999987788999999987777778899999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|.+++... ...+++..+..++.+++.|++|||+. +++|+||||+||+++.++.++|+|||.+........ .
T Consensus 84 ~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~ 156 (256)
T cd05112 84 GCLSDYLRAQ---RGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-T 156 (256)
T ss_pred CcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc-c
Confidence 9998887432 34578999999999999999999998 999999999999999999999999999875533211 1
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
......++..|+|||.+.+. .++.++||||||+++|+|++ |..||...... ........+.....+
T Consensus 157 ~~~~~~~~~~~~aPe~~~~~--~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~--- 223 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSFS--KYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--------EVVETINAGFRLYKP--- 223 (256)
T ss_pred ccCCCccchhhcCHhHhccC--CcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--------HHHHHHhCCCCCCCC---
Confidence 11223356789999988754 67889999999999999998 88888643321 122223322222111
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLEML 338 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L 338 (373)
...+..+.+|+.+||+.+|++|||++++++.|
T Consensus 224 ---~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 224 ---RLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred ---CCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 11346799999999999999999999999987
No 162
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=8.8e-40 Score=291.30 Aligned_cols=247 Identities=25% Similarity=0.419 Sum_probs=195.1
Q ss_pred ccCCCCcEEEEEEEEc---CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCC
Q 048542 72 KLGQGGFGSVYKGQLQ---TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGS 146 (373)
Q Consensus 72 ~ig~G~~g~V~~~~~~---~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gs 146 (373)
.||+|+||.||+|.+. ++..||+|++...... .+.+.+|+.+++.++||||+++++++.. ...++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 4899999999999764 3456999998765332 3568899999999999999999998864 57899999999999
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCcee-
Q 048542 147 LDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS- 225 (373)
Q Consensus 147 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~- 225 (373)
|.+++.. ....+++..+..++.|++.||+|||++ +++|+||||+||+++.++.+||+|||++...........
T Consensus 81 L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 81 LNKFLSG---KKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred HHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 9988742 234689999999999999999999998 999999999999999999999999999975543322211
Q ss_pred eecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 226 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 226 ~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
.....++..|+|||.+.+. .++.++|||||||++|+|++ |..||...... .....+..+.....+
T Consensus 155 ~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~---- 220 (257)
T cd05115 155 RSAGKWPLKWYAPECINFR--KFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--------EVMSFIEQGKRLDCP---- 220 (257)
T ss_pred cCCCCCCcccCCHHHHccC--CCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCCCCCCCC----
Confidence 1222345789999988654 67889999999999999996 99998654321 122333333322221
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
...+..+.+++.+||+.+|++||++.++.+.|+..
T Consensus 221 --~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 221 --AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred --CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 23356889999999999999999999999999864
No 163
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4.9e-41 Score=316.38 Aligned_cols=249 Identities=22% Similarity=0.237 Sum_probs=192.9
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
|.+.+.||+|+||.||+|... +++.||+|++..... ....+.+|+.+++.++||||+++++.+.++...++||||
T Consensus 3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~ 82 (382)
T cd05625 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY 82 (382)
T ss_pred cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeC
Confidence 566789999999999999865 678999999875432 235678899999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
|++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 83 ~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 83 IPGGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999988832 34688999999999999999999998 99999999999999999999999999975321000
Q ss_pred C---------------------------------------------ceeeecccCCCCcccccccccccCCcCcccchHH
Q 048542 222 D---------------------------------------------FVSISATRGTIGYIAPELISRNFGTVSCKSDVYG 256 (373)
Q Consensus 222 ~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~Dvws 256 (373)
. ........||+.|+|||++.+. .++.++||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~~DiwS 233 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT--GYTQLCDWWS 233 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC--CCCCeeeEEe
Confidence 0 0001124689999999998764 6888999999
Q ss_pred HHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCC---HHH
Q 048542 257 FGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPS---MTK 333 (373)
Q Consensus 257 lG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~e 333 (373)
+||++|+|++|+.||....... ..............+.. ..++..+.+++.+|+ .+|.+|++ +++
T Consensus 234 lGvil~elltG~~Pf~~~~~~~-------~~~~i~~~~~~~~~p~~----~~~s~~~~~li~~l~-~~p~~R~~~~~~~e 301 (382)
T cd05625 234 VGVILYEMLVGQPPFLAQTPLE-------TQMKVINWQTSLHIPPQ----AKLSPEASDLIIKLC-RGPEDRLGKNGADE 301 (382)
T ss_pred chHHHHHHHhCCCCCCCCCHHH-------HHHHHHccCCCcCCCCc----ccCCHHHHHHHHHHc-cCHhHcCCCCCHHH
Confidence 9999999999999997543211 11111111111222211 234567788888876 59999997 777
Q ss_pred HHH
Q 048542 334 VLE 336 (373)
Q Consensus 334 ll~ 336 (373)
+++
T Consensus 302 i~~ 304 (382)
T cd05625 302 IKA 304 (382)
T ss_pred Hhc
Confidence 764
No 164
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.9e-40 Score=294.14 Aligned_cols=249 Identities=29% Similarity=0.458 Sum_probs=204.1
Q ss_pred HHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
..+++.+.||.|+||.||+|... |+.||+|.+.......+++.+|+.+++.++|+||+++++++.+....++||||+++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 45677899999999999999876 88999999987665567889999999999999999999999988999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|.+++.... ...+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||.+.......
T Consensus 85 ~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--- 156 (256)
T cd05039 85 GSLVDYLRSRG--RAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--- 156 (256)
T ss_pred CcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence 99999884322 23689999999999999999999998 99999999999999999999999999998653221
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
.....+..|+|||.+.+. .++.++|+||||+++|+|++ |..||..... .........+.....
T Consensus 157 --~~~~~~~~~~ape~~~~~--~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~---- 220 (256)
T cd05039 157 --DSGKLPVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KDVVPHVEKGYRMEA---- 220 (256)
T ss_pred --ccCCCcccccCchhhcCC--cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHhcCCCCCC----
Confidence 123356689999988653 67889999999999999997 8888854321 112223332222211
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
+..++..+.+++.+||+.+|++|||++++++.|++
T Consensus 221 --~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 221 --PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred --ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 12345688999999999999999999999999975
No 165
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=8.9e-41 Score=307.61 Aligned_cols=239 Identities=23% Similarity=0.281 Sum_probs=191.1
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEe
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
|++.+.||+|+||.||+|... ++..||+|++..... ..+.+..|..++..+ +|++|+.+++++...+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 566789999999999999866 677999999875422 224566777887777 58999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++|+|.+.+. ....+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~~g~L~~~~~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 82 YVNGGDLMYQIQ----QVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred CCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 999999988873 235688999999999999999999998 9999999999999999999999999998743322
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.. ......||+.|+|||.+.+. .++.++|||||||++|+|++|+.||...... .....+.... .
T Consensus 155 ~~--~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--------~~~~~i~~~~-~--- 218 (323)
T cd05616 155 GV--TTKTFCGTPDYIAPEIIAYQ--PYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIMEHN-V--- 218 (323)
T ss_pred CC--ccccCCCChhhcCHHHhcCC--CCCCccchhchhHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCC-C---
Confidence 11 12345689999999999764 7889999999999999999999999754321 1122222211 1
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSM 331 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 331 (373)
..+..++.++.+++.+||+.||.+|++.
T Consensus 219 ---~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 219 ---AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ---CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1123456788999999999999999985
No 166
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.8e-40 Score=300.73 Aligned_cols=257 Identities=26% Similarity=0.424 Sum_probs=201.1
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 136 (373)
..|++.+.||+|+||.||+|..+ ++..+|+|.+...... ..++.+|+.+++.++||||+++++++.++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC 84 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence 35667799999999999999853 4678999998754332 356889999999999999999999999999999
Q ss_pred EEEeccCcCCccccccCCC------------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCe
Q 048542 137 LVYEYMPNGSLDRHVFPKE------------------SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 198 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~------------------~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Ni 198 (373)
++|||+++++|.+++.... .....+++..++.++.|++.||+|||++ +++||||||+||
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~ni 161 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNC 161 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhhe
Confidence 9999999999988885321 1123578889999999999999999998 999999999999
Q ss_pred eeeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCc
Q 048542 199 LLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATR 277 (373)
Q Consensus 199 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~ 277 (373)
+++.++.++|+|||++.................+..|+|||.+.+. .++.++|||||||++|+|++ |..||......
T Consensus 162 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 162 LVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYN--RYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred EecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9999999999999998754333221112223356679999988664 78889999999999999997 77787543221
Q ss_pred cccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 278 SSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
........+..... +..++..+.+++.+||+.+|++|||+.|+++.|+.
T Consensus 240 --------~~~~~~~~~~~~~~------~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 --------EVIYYVRDGNVLSC------PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --------HHHHHHhcCCCCCC------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 12222332222211 12345679999999999999999999999999873
No 167
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=6.2e-40 Score=291.75 Aligned_cols=248 Identities=27% Similarity=0.395 Sum_probs=201.7
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc---cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK---FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|.+.+.||+|++|.||+|..+ ++..|++|.+.... .....+.+|+.+++.++|||++++++++.+....+++|||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence 456788999999999999875 68899999987543 23467889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++... .+..+++..+..++.+++.||.|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 82 ~~~~L~~~l~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 82 ENGDLHKLLKMQ--RGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 999999988543 245688999999999999999999998 999999999999999999999999999886543322
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
. .....|++.|+|||...+. .++.++|+||||+++|+|++|+.||...... ........+...
T Consensus 157 ~--~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~----- 219 (256)
T cd08529 157 F--ANTIVGTPYYLSPELCEDK--PYNEKSDVWALGVVLYECCTGKHPFDANNQG--------ALILKIIRGVFP----- 219 (256)
T ss_pred h--hhccccCccccCHHHhcCC--CCCCccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCC-----
Confidence 1 1234588899999998764 6788999999999999999999999754421 111222222211
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
..+..++..+.+++.+||+.+|++||++.++++.
T Consensus 220 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 -PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred -CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1222456789999999999999999999999873
No 168
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4.8e-40 Score=292.89 Aligned_cols=247 Identities=29% Similarity=0.466 Sum_probs=196.3
Q ss_pred cccCCCCcEEEEEEEEc-C---CceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-T---GGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~---~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
++||+|+||.||+|.+. + +..+|+|.+..... ..+++.+|+.+++.+.|+|++++++++. ....+++|||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46999999999999754 2 26899999887655 3467889999999999999999999876 4567999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|.+++.. ...+++..+..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||++..........
T Consensus 80 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 80 GPLLKYLKK----RREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 999998843 34689999999999999999999998 99999999999999999999999999998664333221
Q ss_pred -eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 225 -SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 225 -~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
......++..|+|||.+.+. .++.++|+||||+++|+|++ |..||...... .....+.......
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--------~~~~~~~~~~~~~---- 218 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYG--KFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--------EVIAMLESGERLP---- 218 (257)
T ss_pred ccccCccccccccCHHHhcCC--CCCccchHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHcCCcCC----
Confidence 11122245679999988654 68889999999999999998 89998654321 1222222222211
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
.+..++..+.+++.+||+.+|++|||+.++++.|++.
T Consensus 219 --~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 219 --RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred --CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 1223456789999999999999999999999999875
No 169
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.3e-40 Score=306.29 Aligned_cols=262 Identities=27% Similarity=0.436 Sum_probs=201.3
Q ss_pred HHHhhhhcccCCCCcEEEEEEEE------cCCceeEEEEeccCccC--HHHHHHHHHHhccc-CCCceeeEeeEeee-CC
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQL------QTGGLIAVKMLENSKFS--AEEFINEVSTIGRI-HHVNVVQLLGFCSE-GS 133 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l-~h~ni~~~~~~~~~-~~ 133 (373)
..+|++.+.||+|+||.||+|.. .+++.||||+++..... ...+.+|+.++..+ +||||+++++++.. +.
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 34678899999999999999973 25678999999764332 35678999999999 68999999998765 45
Q ss_pred eeEEEEeccCcCCccccccCCCC---------------------------------------------------------
Q 048542 134 KRALVYEYMPNGSLDRHVFPKES--------------------------------------------------------- 156 (373)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 156 (373)
..+++|||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 67899999999999888743211
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeeccc
Q 048542 157 ------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 230 (373)
Q Consensus 157 ------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 230 (373)
....+++..+..++.|+++||+|||++ +++||||||+||+++.++.+||+|||++................
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 012467888899999999999999998 99999999999999999999999999987653332222222234
Q ss_pred CCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHH
Q 048542 231 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMI 309 (373)
Q Consensus 231 gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (373)
++..|+|||.+.+. .++.++||||||+++|+|++ |..||....... ........+.....+ ...
T Consensus 243 ~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~------~~~ 307 (343)
T cd05103 243 LPLKWMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAP------DYT 307 (343)
T ss_pred CCcceECcHHhcCC--CCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-------HHHHHHhccCCCCCC------CCC
Confidence 56789999988654 67889999999999999997 888886543211 122222232222221 123
Q ss_pred HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 310 ARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 310 ~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
+..+.+++.+||+.||++|||+.++++.|+.++.
T Consensus 308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 4578999999999999999999999999987654
No 170
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.3e-40 Score=295.95 Aligned_cols=256 Identities=23% Similarity=0.375 Sum_probs=190.4
Q ss_pred cccCCCCcEEEEEEEEcC---CceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 71 HKLGQGGFGSVYKGQLQT---GGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~---~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
+.||+|+||.||+|...+ ...+++|.+...... ...+.+|+..++.++|+||+++++.+......++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 468999999999997543 346888877644322 256789999999999999999999999999999999999999
Q ss_pred CccccccCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 146 SLDRHVFPKESR-GQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 146 sL~~~l~~~~~~-~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
+|.+++...... ....++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 999988544321 23356778889999999999999998 99999999999999999999999999986543322222
Q ss_pred eeecccCCCCcccccccccc-----cCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 225 SISATRGTIGYIAPELISRN-----FGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~-----~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
......++..|+|||++... ...++.++|||||||++|+|++ |..||...... ........ .....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-------~~~~~~~~-~~~~~ 229 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE-------QVLKQVVR-EQDIK 229 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH-------HHHHHHhh-ccCcc
Confidence 22233466789999987431 1256789999999999999999 67777543221 11111111 11111
Q ss_pred cCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 299 LQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 299 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
.+. ...+..++..+.+++..|| .||++|||+++|++.|.
T Consensus 230 ~~~-~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 230 LPK-PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCC-CcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 111 1222345667788999999 59999999999999873
No 171
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.2e-40 Score=299.46 Aligned_cols=262 Identities=24% Similarity=0.377 Sum_probs=197.5
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-----------------CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-----------------TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQL 125 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-----------------~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~ 125 (373)
.+|++.+.||+|+||.||++... ++..+|+|.+..... ...++.+|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 35678899999999999998532 234689999875432 23678899999999999999999
Q ss_pred eeEeeeCCeeEEEEeccCcCCccccccCCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCe
Q 048542 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKES-------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 198 (373)
Q Consensus 126 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Ni 198 (373)
++++..+...+++|||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++|+||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence 9999999999999999999999988854321 123477889999999999999999998 999999999999
Q ss_pred eeeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc--CCCCCCCCcC
Q 048542 199 LLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG--GRRNSNMNAT 276 (373)
Q Consensus 199 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~--g~~p~~~~~~ 276 (373)
+++.++.++|+|||++................++..|+|||...+. .++.++|+|||||++|+|++ |..||.....
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLG--KFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcC--CccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 9999999999999998765433221112223346789999987653 78899999999999999998 6667653322
Q ss_pred ccccccchHHHHHHHhcC-CCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 277 RSSKAYFPSWVYDQLNKG-GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
... . .......... .....+ .+..++..+.+|+.+||+.||.+|||+.++++.|+
T Consensus 240 ~~~---~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 240 EQV---I-ENTGEFFRDQGRQVYLP----KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHH---H-HHHHHHHhhccccccCC----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 110 0 0000111111 111111 11223467899999999999999999999999986
No 172
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.1e-40 Score=297.18 Aligned_cols=255 Identities=26% Similarity=0.448 Sum_probs=200.1
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CC---ceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TG---GLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~---~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 138 (373)
..+++.+.||+|+||.||+|... ++ ..||+|.+..... ...++..|+.+++.++||||+++++++.++...+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 45678899999999999999865 33 3599999876432 236789999999999999999999999999999999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
|||+++++|.+++... ...+++..+..++.|++.|+.|||++ +++|+||||+||+++.++.++|+|||++....
T Consensus 84 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 84 TEFMENGALDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EecCCCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccc
Confidence 9999999999888432 34588999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCceeeeccc---CCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcC
Q 048542 219 KENDFVSISATR---GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKG 294 (373)
Q Consensus 219 ~~~~~~~~~~~~---gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 294 (373)
............ .+..|+|||.+.+. .++.++||||+||++|||++ |..||....... ....+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~--------~~~~i~~~ 227 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYR--KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--------VINAIEQD 227 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccC--cccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH--------HHHHHHcC
Confidence 322211111111 24579999998754 77889999999999999886 999986543211 11222222
Q ss_pred CCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 295 GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
..... +..++..+.+++.+||+.+|.+||++++++..|+..
T Consensus 228 ~~~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 YRLPP------PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CcCCC------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111 123456789999999999999999999999999864
No 173
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.2e-40 Score=304.14 Aligned_cols=260 Identities=26% Similarity=0.445 Sum_probs=200.3
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEEEc-CCc--eeEEEEeccCcc--CHHHHHHHHHHhccc-CCCceeeEeeEeeeCCee
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQLQ-TGG--LIAVKMLENSKF--SAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKR 135 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~~~-~~~--~vaiK~~~~~~~--~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~ 135 (373)
+....|++.+.||+|+||.||+|.++ ++. .+++|.++.... ....+.+|+.++.++ +|+||+++++++..+...
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 34456778899999999999999865 444 457777664322 235788899999999 899999999999999999
Q ss_pred EEEEeccCcCCccccccCCC------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC
Q 048542 136 ALVYEYMPNGSLDRHVFPKE------------SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN 203 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~ 203 (373)
+++|||+++++|.+++.... .....+++..+..++.|++.|++|||+. +++||||||+||+++.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCC
Confidence 99999999999998885332 1234688999999999999999999998 99999999999999999
Q ss_pred CceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCcccccc
Q 048542 204 FIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAY 282 (373)
Q Consensus 204 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~ 282 (373)
+.+||+|||++...... .......++..|+|||.+.+. .++.++|||||||++|+|++ |..||.......
T Consensus 161 ~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---- 231 (303)
T cd05088 161 YVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---- 231 (303)
T ss_pred CcEEeCccccCcccchh---hhcccCCCcccccCHHHHhcc--CCcccccchhhhhHHHHHHhcCCCCcccCChHH----
Confidence 99999999998632111 111112245679999988654 67889999999999999998 999886443211
Q ss_pred chHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 283 FPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
.......+..... +...+..+.+|+.+||+.+|++||+++++++.|+.++.
T Consensus 232 ----~~~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 232 ----LYEKLPQGYRLEK------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred ----HHHHHhcCCcCCC------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1222222211111 12235678999999999999999999999999987544
No 174
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.8e-40 Score=294.00 Aligned_cols=248 Identities=23% Similarity=0.316 Sum_probs=200.6
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc--cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
|++.+.||.|+||.||++... +++.+|+|.++... ...+.+.+|+.+++.++|+||+++++.+..+...+++|||++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD 81 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence 567789999999999999866 78899999886433 234678889999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++... .+..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++++|||.+.........
T Consensus 82 ~~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 156 (255)
T cd08219 82 GGDLMQKIKLQ--RGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY 156 (255)
T ss_pred CCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccccc
Confidence 99998877432 345688999999999999999999998 9999999999999999999999999998765433221
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
.....|+..|+|||.+.+. .++.++|+||||+++|+|++|..||...... . .......+....
T Consensus 157 --~~~~~~~~~~~aPE~~~~~--~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-------~-~~~~~~~~~~~~----- 219 (255)
T cd08219 157 --ACTYVGTPYYVPPEIWENM--PYNNKSDIWSLGCILYELCTLKHPFQANSWK-------N-LILKVCQGSYKP----- 219 (255)
T ss_pred --cccccCCccccCHHHHccC--CcCchhhhhhhchhheehhhccCCCCCCCHH-------H-HHHHHhcCCCCC-----
Confidence 2234588899999998764 6788999999999999999999999643321 1 111222222111
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
.+..++..+.+++.+||+.||++|||+.+++..
T Consensus 220 -~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 -LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 123345678999999999999999999999874
No 175
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4e-40 Score=295.15 Aligned_cols=255 Identities=27% Similarity=0.443 Sum_probs=201.8
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-C---CceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-T---GGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~---~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 138 (373)
..|++.+.||+|+||.||+|.+. + +..+|+|.++..... .+.+.+|+.+++.++||||+++++++..+...+++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46778899999999999999864 2 237999998764332 35788999999999999999999999999999999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
|||+++++|.+++... ...+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++....
T Consensus 84 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 84 TEYMENGSLDAFLRKH---DGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 9999999999988432 34588999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCcee-eecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCC
Q 048542 219 KENDFVS-ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGD 296 (373)
Q Consensus 219 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
....... .....++..|+|||.+.+. .++.++|+||||+++|++++ |..||....... ....+..+..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~--~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--------~~~~~~~~~~ 227 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYR--KFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--------VIKAIEEGYR 227 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccC--ccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--------HHHHHhCCCc
Confidence 4322111 1122235679999998764 68889999999999999886 999986543211 1122222211
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
... +..++..+.+++.+||+.+|.+||++.++++.|+..
T Consensus 228 ~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 LPA------PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCC------CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 111 123456789999999999999999999999999864
No 176
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=6.9e-40 Score=290.55 Aligned_cols=246 Identities=26% Similarity=0.414 Sum_probs=196.4
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCcc
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLD 148 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~ 148 (373)
+.||+|+||.||+|...++..+|+|.+...... ...+.+|+.+++.++||||+++++++......++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 368999999999999888889999998764332 346889999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeec
Q 048542 149 RHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 228 (373)
Q Consensus 149 ~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 228 (373)
+++... ...+.+..+..++.+++.||.|+|+. +++|+||||+||+++.++.+||+|||++........ .....
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~ 153 (250)
T cd05085 81 SFLRKK---KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-SSSGL 153 (250)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccccc-ccCCC
Confidence 887432 34578999999999999999999998 999999999999999999999999999875432211 11112
Q ss_pred ccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhH
Q 048542 229 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIES 307 (373)
Q Consensus 229 ~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
..++..|+|||.+.+. .++.++||||||+++|++++ |..||...... ........+..... +.
T Consensus 154 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~------~~ 217 (250)
T cd05085 154 KQIPIKWTAPEALNYG--RYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--------QAREQVEKGYRMSC------PQ 217 (250)
T ss_pred CCCcccccCHHHhccC--CCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHHcCCCCCC------CC
Confidence 2345679999998654 67889999999999999998 88898654321 12222222222211 12
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 308 MIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 308 ~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
.++..+.+++.+||+.+|++|||+.++++.|.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 218 KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 24568999999999999999999999999885
No 177
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=7.4e-40 Score=296.08 Aligned_cols=263 Identities=22% Similarity=0.351 Sum_probs=201.1
Q ss_pred HHhhhhcccCCCCcEEEEEEEE-----cCCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeC--Cee
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQL-----QTGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEG--SKR 135 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~~ 135 (373)
..|++.+.||+|+||.||++.. .++..||+|.++.... ....+.+|+.+++.++|||++++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3567789999999999999974 2577899999875432 236788999999999999999999998765 568
Q ss_pred EEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcc
Q 048542 136 ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 215 (373)
+++|||+++++|.+++... ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.++|+|||++.
T Consensus 84 ~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred EEEEEccCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccc
Confidence 8999999999999887322 23588999999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCCce-eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcc-------ccccchHHH
Q 048542 216 FHPKENDFV-SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRS-------SKAYFPSWV 287 (373)
Q Consensus 216 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~-------~~~~~~~~~ 287 (373)
......... ......++..|+|||.+.+. .++.++|||||||++|+|++++.|........ .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~--~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQS--KFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccC--CCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 664433221 12234467789999988664 67889999999999999999877653321110 000001111
Q ss_pred HHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 288 YDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
......+.... .+..++..+.+|+.+||+.+|++|||++++++.|+.+
T Consensus 236 ~~~~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 236 VRVLEEGKRLP------RPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHcCccCC------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 11222222111 1123467899999999999999999999999999865
No 178
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.6e-40 Score=306.15 Aligned_cols=241 Identities=25% Similarity=0.321 Sum_probs=188.5
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHH-HhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVS-TIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~-~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||.||+|..+ +++.||+|++..... ....+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46899999999999876 677899999875322 1233444444 56778999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|.+++. ....+.+..+..++.|+++||.|||+. +++||||||+|||++.++.+||+|||++........
T Consensus 81 ~~L~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~-- 151 (325)
T cd05602 81 GELFYHLQ----RERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG-- 151 (325)
T ss_pred CcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC--
Confidence 99988883 345678888999999999999999998 999999999999999999999999999875322221
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......||+.|+|||++.+. .++.++||||+||++|+|++|..||....... ....+.... . .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--------~~~~i~~~~-~------~ 214 (325)
T cd05602 152 TTSTFCGTPEYLAPEVLHKQ--PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE--------MYDNILNKP-L------Q 214 (325)
T ss_pred CcccccCCccccCHHHHcCC--CCCCccccccccHHHHHHhcCCCCCCCCCHHH--------HHHHHHhCC-c------C
Confidence 12345699999999998764 78889999999999999999999997543211 111111111 1 1
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
.+..++..+.+++.+||+.||.+||++.+.+..
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 215 LKPNITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 112346678999999999999999998754433
No 179
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=6.7e-40 Score=301.05 Aligned_cols=261 Identities=20% Similarity=0.268 Sum_probs=187.8
Q ss_pred hcccCCCCcEEEEEEEEc---CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeee--CCeeEEEEeccCc
Q 048542 70 THKLGQGGFGSVYKGQLQ---TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE--GSKRALVYEYMPN 144 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~---~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~~lv~e~~~~ 144 (373)
.++||+|+||.||+|..+ ++..+|+|.+..... ...+.+|+.+++.++||||+++++++.. +...+++|||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence 468999999999999865 467899999876443 3457789999999999999999998854 456889999985
Q ss_pred CCccccccCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeee----eCCCceEEeeccCcc
Q 048542 145 GSLDRHVFPKE-----SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILL----DHNFIPKVSDFGLAK 215 (373)
Q Consensus 145 gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~----~~~~~~kl~Dfg~~~ 215 (373)
++|.+++.... .....+++..+..++.|++.||.|||++ +++||||||+|||+ +.++.+||+|||++.
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 47766653221 1234588999999999999999999998 99999999999999 456789999999998
Q ss_pred cCCCCCC-ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccc--cchHHHHHHHh
Q 048542 216 FHPKEND-FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKA--YFPSWVYDQLN 292 (373)
Q Consensus 216 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~--~~~~~~~~~~~ 292 (373)
....... ........||+.|+|||.+.+. ..++.++||||+||++|+|++|+.||.......... ...........
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07868 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 239 (317)
T ss_pred ccCCCCccccccCCccccccccCCHHHcCC-CCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHH
Confidence 6543221 1122345689999999998763 357889999999999999999999997544321110 00000000000
Q ss_pred cCCCc------------------------ccC--cc----chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 293 KGGDL------------------------ELQ--NV----TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 293 ~~~~~------------------------~~~--~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..... ... .. .......+..+.+|+.+||+.||.+|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 240 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred hcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000 000 00 0000011245789999999999999999999986
No 180
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=5.6e-40 Score=294.27 Aligned_cols=255 Identities=28% Similarity=0.442 Sum_probs=200.9
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCc---eeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGG---LIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~---~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 138 (373)
..++..+.||+|+||.||+|..+ +++ .+|+|.++.... ..+++.+|+.+++.++|||++++.+++......+++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 35566789999999999999865 333 699999876432 236788999999999999999999999999999999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
|||+++++|.+++.. ....+++..+..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus 85 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 85 TEYMENGALDKYLRD---HDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 999999999888843 235688999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCcee-eecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCC
Q 048542 219 KENDFVS-ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGD 296 (373)
Q Consensus 219 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
....... ......+..|+|||.+.+. .++.++|||||||++|+|++ |..||...... .....+..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--------~~~~~i~~~~~ 228 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYR--KFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--------EVMKAINDGFR 228 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcC--CcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--------HHHHHHhcCCC
Confidence 3222111 1112234579999998764 67889999999999999997 99998643321 12222222221
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
... +..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 229 ~~~------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 229 LPA------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCC------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111 112356789999999999999999999999999875
No 181
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.3e-40 Score=301.31 Aligned_cols=258 Identities=24% Similarity=0.426 Sum_probs=200.1
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCc--eeEEEEeccCcc--CHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGG--LIAVKMLENSKF--SAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~--~vaiK~~~~~~~--~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
.|++.+.||+|+||.||+|..+ ++. .+++|.++.... ..+.+.+|+.++.++ +||||+++++++......++++
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 82 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAI 82 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEE
Confidence 4677899999999999999875 333 468888774322 235788999999999 7999999999999989999999
Q ss_pred eccCcCCccccccCCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceE
Q 048542 140 EYMPNGSLDRHVFPKES------------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPK 207 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~k 207 (373)
||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 83 EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeEE
Confidence 99999999988843221 123588999999999999999999998 999999999999999999999
Q ss_pred EeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHH
Q 048542 208 VSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSW 286 (373)
Q Consensus 208 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~ 286 (373)
|+|||++...... ........+..|+|||.+.+. .++.++|||||||++|+|++ |..||.......
T Consensus 160 l~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-------- 226 (297)
T cd05089 160 IADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYS--VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-------- 226 (297)
T ss_pred ECCcCCCccccce---eccCCCCcCccccCchhhccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--------
Confidence 9999998632211 111112235579999988654 67889999999999999997 999986543211
Q ss_pred HHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCCCC
Q 048542 287 VYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDDL 345 (373)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~~~ 345 (373)
.......+..... +..++..+.+|+.+||+.+|.+|||++++++.|+.+....
T Consensus 227 ~~~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 227 LYEKLPQGYRMEK------PRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred HHHHHhcCCCCCC------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1222222222111 1234567899999999999999999999999999876543
No 182
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.1e-39 Score=294.24 Aligned_cols=248 Identities=23% Similarity=0.354 Sum_probs=195.5
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
+++.+.||+|+||.||+|... +++.||+|.+...... ..++.+|+.++++++||||+++++.+......+++|||++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 82 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD 82 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC
Confidence 466789999999999999864 7889999998654322 3568899999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|..+ ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 83 ~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~-- 149 (279)
T cd06619 83 GGSLDVY--------RKIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-- 149 (279)
T ss_pred CCChHHh--------hcCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc--
Confidence 9988543 2467888899999999999999998 99999999999999999999999999987543321
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
.....|+..|+|||.+.+. .++.++|+||||+++|+|++|+.||........... .................
T Consensus 150 --~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--- 221 (279)
T cd06619 150 --AKTYVGTNAYMAPERISGE--QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM-PLQLLQCIVDEDPPVLP--- 221 (279)
T ss_pred --ccCCCCChhhcCceeecCC--CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc-hHHHHHHHhccCCCCCC---
Confidence 2234689999999998764 678899999999999999999999975432221111 11111111111111111
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
....+.++.+++.+||+.+|++||+++++++.
T Consensus 222 --~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 222 --VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred --CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11235578999999999999999999999873
No 183
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.4e-40 Score=312.30 Aligned_cols=260 Identities=22% Similarity=0.319 Sum_probs=194.7
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCC-----eeEE
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGS-----KRAL 137 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-----~~~l 137 (373)
+++.+.||+|+||.||++... +++.||+|.+..... ...++.+|+.+++.++|+||+++++++.... ..|+
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 356789999999999999865 789999999865322 2357889999999999999999999997766 7899
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
|+||+. ++|.+.+. ....+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++...
T Consensus 82 v~e~~~-~~l~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 82 VTELMQ-SDLHKIIV----SPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred Eeeccc-cCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 999996 57776662 345689999999999999999999998 9999999999999999999999999999754
Q ss_pred CCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc---------hHH--
Q 048542 218 PKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF---------PSW-- 286 (373)
Q Consensus 218 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~---------~~~-- 286 (373)
..... .......++..|+|||.+.+. ..++.++||||+||++|+|++|+.||...........+ ..+
T Consensus 154 ~~~~~-~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 154 EPDES-KHMTQEVVTQYYRAPEILMGS-RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRS 231 (372)
T ss_pred ccCcc-ccCCCCCcCCCcCCHHHHcCC-CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 32221 112334578899999998764 35788999999999999999999999755422100000 000
Q ss_pred ----HHHHHhcC-CCcc-cCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 287 ----VYDQLNKG-GDLE-LQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 287 ----~~~~~~~~-~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
....+... .... ...........+..+.+|+.+||+.||.+|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 00001000 0000 00000111223567899999999999999999999986
No 184
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.2e-40 Score=302.91 Aligned_cols=236 Identities=25% Similarity=0.342 Sum_probs=185.8
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHH-HhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVS-TIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~-~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||.||+|+.. +++.||+|++..... ....+..|.. +++.++||||+++++++.+....++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999976 678999999875322 1234455554 57888999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|...+. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 81 ~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-- 151 (321)
T cd05603 81 GELFFHLQ----RERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE-- 151 (321)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC--
Confidence 99987773 345688899999999999999999998 999999999999999999999999999875322211
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......||+.|+|||.+.+. .++.++|||||||++|+|++|..||...... . ....+.... ..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~-~~~~i~~~~-~~------ 214 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLRKE--PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS-------Q-MYDNILHKP-LQ------ 214 (321)
T ss_pred ccccccCCcccCCHHHhcCC--CCCCcCcccccchhhhhhhcCCCCCCCCCHH-------H-HHHHHhcCC-CC------
Confidence 12345689999999998764 6888999999999999999999999754321 1 112222111 11
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMT 332 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ 332 (373)
.+...+..+.+++.+||+.||.+||+..
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 215 LPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 1123356789999999999999999864
No 185
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-41 Score=308.43 Aligned_cols=265 Identities=25% Similarity=0.356 Sum_probs=210.2
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEE
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
+-.....+.++||+|-||.|.+|....+.+||+|+++..... ..+|.+|+++|.+++||||+.++|+|..++.+++++
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence 334445677999999999999999887899999999875443 378999999999999999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
|||++|+|..++..++-.. +..+....|+.||+.|++||.+. ++||||+.+.|+|+++++++||+|||+++.+-.
T Consensus 615 EYmEnGDLnqFl~aheapt--~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPT--AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred HHHhcCcHHHHHHhccCcc--cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccccccccc
Confidence 9999999999996553222 34455667999999999999998 999999999999999999999999999986655
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc--CCCCCCCCcCccccccchHHHHHHHhcCC-C
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG--GRRNSNMNATRSSKAYFPSWVYDQLNKGG-D 296 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~ 296 (373)
.+.+.......-+.+|||+|.+.. ++++.++|||+||+.+||+++ ...||.....++ +.+...... .
T Consensus 690 g~yy~vqgr~vlpiRwmawEsill--gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--------vven~~~~~~~ 759 (807)
T KOG1094|consen 690 GDYYRVQGRAVLPIRWMAWESILL--GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--------VVENAGEFFRD 759 (807)
T ss_pred CCceeeecceeeeeeehhHHHHHh--ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--------HHHhhhhhcCC
Confidence 544444344556789999998865 489999999999999999975 556776443321 222211110 0
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
....-....|..++..+.+++.+||+.|-++|||++++...|...
T Consensus 760 ~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 760 QGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 111111233455677899999999999999999999999988753
No 186
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.9e-40 Score=306.09 Aligned_cols=258 Identities=21% Similarity=0.232 Sum_probs=192.6
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCC------
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGS------ 133 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~------ 133 (373)
...|++.+.||+|+||.||++... +|..||+|.+..... ....+.+|+.+++.++||||+++++++....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 456788899999999999999865 688999999875422 2356789999999999999999999886443
Q ss_pred eeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccC
Q 048542 134 KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGL 213 (373)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~ 213 (373)
..|+||||+++ +|...+ ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+
T Consensus 100 ~~~lv~e~~~~-~l~~~~------~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 100 DVYLVMELMDA-NLCQVI------HMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred eeEEEEeCCCc-CHHHHH------hccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCC
Confidence 47999999965 555544 13478888999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccc-----------c
Q 048542 214 AKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKA-----------Y 282 (373)
Q Consensus 214 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~-----------~ 282 (373)
+....... ......||..|+|||.+.+. .++.++||||+||++|+|++|+.||.......... .
T Consensus 170 a~~~~~~~---~~~~~~~t~~y~aPE~~~~~--~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 244 (359)
T cd07876 170 ARTACTNF---MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAE 244 (359)
T ss_pred ccccccCc---cCCCCcccCCCCCchhccCC--CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHH
Confidence 87543221 12334689999999999764 78889999999999999999999997543211000 0
Q ss_pred c----hHHHHHHHhcCCCcc------------cCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 283 F----PSWVYDQLNKGGDLE------------LQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 283 ~----~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
+ ............... .+.........+..+.+|+.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 245 FMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 000000000000000 00001111223567899999999999999999999987
No 187
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.9e-40 Score=296.74 Aligned_cols=262 Identities=25% Similarity=0.308 Sum_probs=203.0
Q ss_pred HHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEE
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
....|++.+.||+|+||+||++... ++..||+|++..... ..+++.+|+.+++.++||||+++++++......++||
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 3457788899999999999999865 688899998765432 2467889999999999999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
||+++++|.+++. ....+++..+..++.+++.||.|||+. .+++|+||+|+||+++.++.++|+|||++.....
T Consensus 83 e~~~~~~L~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~ 156 (284)
T cd06620 83 EFMDCGSLDRIYK----KGGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN 156 (284)
T ss_pred ecCCCCCHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhh
Confidence 9999999988773 235689999999999999999999962 2899999999999999999999999999864422
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
.. .....|+..|+|||.+.+. .++.++|+|||||++|+|++|..||............................
T Consensus 157 ~~----~~~~~~~~~~~aPE~~~~~--~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd06620 157 SI----ADTFVGTSTYMSPERIQGG--KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP 230 (284)
T ss_pred hc----cCccccCcccCCHHHHccC--CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC
Confidence 21 1234688999999998654 77889999999999999999999998654322111111111111111111111
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEML 338 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L 338 (373)
.... ...++..+.+|+.+||+.||++|||++|+++..
T Consensus 231 ~~~~--~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 231 PRLP--SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred CCCC--chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 1000 012456789999999999999999999999853
No 188
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.3e-40 Score=289.55 Aligned_cols=266 Identities=22% Similarity=0.269 Sum_probs=212.7
Q ss_pred hHHHHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC----HHHHHHHHHHhcccCCCceeeEeeEeeeCCe
Q 048542 60 PQIIAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS----AEEFINEVSTIGRIHHVNVVQLLGFCSEGSK 134 (373)
Q Consensus 60 ~~i~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 134 (373)
..+-....++.+.||+|.-|+||+++.+ ++..+|+|++.+.... ..+...|-++|..++||.++.+|..++.+..
T Consensus 72 ~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~ 151 (459)
T KOG0610|consen 72 GSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKY 151 (459)
T ss_pred CccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccce
Confidence 3344556678899999999999999977 5689999999875443 2556779999999999999999999999999
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
.|++||||+||+|+.+... +.+..+++..++-++..++-||+|||.. |||.|||||+|||+.++|++-|+||.++
T Consensus 152 ~cl~meyCpGGdL~~Lrqk--Qp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS 226 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQK--QPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLS 226 (459)
T ss_pred eEEEEecCCCccHHHHHhh--CCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecccc
Confidence 9999999999999888744 4467799999999999999999999998 9999999999999999999999999987
Q ss_pred ccCCCC---------------------------------CC---------------------ceeeecccCCCCcccccc
Q 048542 215 KFHPKE---------------------------------ND---------------------FVSISATRGTIGYIAPEL 240 (373)
Q Consensus 215 ~~~~~~---------------------------------~~---------------------~~~~~~~~gt~~y~aPE~ 240 (373)
...... .. .......+||-.|+|||+
T Consensus 227 ~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEv 306 (459)
T KOG0610|consen 227 LRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEV 306 (459)
T ss_pred ccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccccee
Confidence 532110 00 011223469999999999
Q ss_pred cccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhh
Q 048542 241 ISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWC 320 (373)
Q Consensus 241 ~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 320 (373)
+.|. ..+.++|+|+||+++|||+.|..||.+....+. ....+.+ .+.++... .++..+++||++.
T Consensus 307 I~G~--GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T-------l~NIv~~--~l~Fp~~~----~vs~~akDLIr~L 371 (459)
T KOG0610|consen 307 IRGE--GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET-------LRNIVGQ--PLKFPEEP----EVSSAAKDLIRKL 371 (459)
T ss_pred eecC--CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh-------HHHHhcC--CCcCCCCC----cchhHHHHHHHHH
Confidence 9987 557799999999999999999999988776542 1111211 12222221 5677899999999
Q ss_pred cCCCCCCCCC----HHHHHH--HHhcCCCCC
Q 048542 321 IQVKAADRPS----MTKVLE--MLEGSIDDL 345 (373)
Q Consensus 321 l~~dp~~Rps----~~ell~--~L~~~~~~~ 345 (373)
|.+||.+|.. +.||-+ +.++..+++
T Consensus 372 LvKdP~kRlg~~rGA~eIK~HpFF~gVnWaL 402 (459)
T KOG0610|consen 372 LVKDPSKRLGSKRGAAEIKRHPFFEGVNWAL 402 (459)
T ss_pred hccChhhhhccccchHHhhcCccccCCChhh
Confidence 9999999998 888754 566766655
No 189
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=7.1e-40 Score=292.62 Aligned_cols=250 Identities=25% Similarity=0.308 Sum_probs=199.2
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC------HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS------AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~------~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 138 (373)
.|.+.+.||+|++|.||+|... ++..+|+|.+...... ...+.+|+.+++.++||||+++++++.++...+++
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 82 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF 82 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence 3567789999999999999864 6889999988754321 24678899999999999999999999999999999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
+||+++++|.+.+. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 83 ~e~~~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 83 MEYMPGGSVKDQLK----AYGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEECCCCcHHHHHH----HhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 99999999988873 234688899999999999999999998 99999999999999999999999999987553
Q ss_pred CCCCce-eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCc
Q 048542 219 KENDFV-SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 297 (373)
Q Consensus 219 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (373)
...... ......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||...... ............
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~- 225 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGE--GYGRKADVWSVGCTVVEMLTEKPPWAEFEAM-------AAIFKIATQPTN- 225 (263)
T ss_pred ccccccccccCCCcCccccCcceeccC--CCCchhhhHHHHHHHHHHHhCCCCccccchH-------HHHHHHhccCCC-
Confidence 321111 11234578899999999775 5888999999999999999999998654221 111111111111
Q ss_pred ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 298 ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
...+..++..+.+++.+||+.+|.+|||+.++++.
T Consensus 226 -----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 -----PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -----CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 12223456688999999999999999999999863
No 190
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1e-39 Score=294.38 Aligned_cols=257 Identities=26% Similarity=0.411 Sum_probs=203.6
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCc----eeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeE
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGG----LIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 136 (373)
...+++.+.||+|+||.||+|.++ +|. .+|+|....... ...++.+|+..++.++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 356678899999999999999865 333 589998876543 23678899999999999999999999987 7889
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
++|||+++|+|.+++... ...+++..+..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||++..
T Consensus 85 ~v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 85 LITQLMPLGCLLDYVRNH---KDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EEEecCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccc
Confidence 999999999999988432 34589999999999999999999998 999999999999999999999999999986
Q ss_pred CCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
..............++..|+|||.+... .++.++|+||||+++|++++ |..||...... .....+..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~ 228 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHR--IYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--------EIPDLLEKGE 228 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcC--CcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHhCCC
Confidence 6533322222223346689999988653 67889999999999999998 99998654321 1222333332
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
....+ ...+..+.+++.+||..+|.+||++.++++.|+.+.+
T Consensus 229 ~~~~~------~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 229 RLPQP------PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCCCC------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 22221 1233568899999999999999999999999998754
No 191
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=7.9e-40 Score=291.34 Aligned_cols=248 Identities=30% Similarity=0.458 Sum_probs=198.2
Q ss_pred HHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEe-eeCCeeEEEEeccC
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC-SEGSKRALVYEYMP 143 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-~~~~~~~lv~e~~~ 143 (373)
..+++.+.||+|+||.||++... |..+|+|.++... ..+.+.+|+.+++.++|+|++++++++ ..+...+++|||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 45677899999999999999766 7889999886543 356788999999999999999999975 45567899999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++... ....+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 84 KGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 99999987432 234588999999999999999999998 99999999999999999999999999987543222
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
....++..|+|||.+.+. .++.++|||||||++|+|++ |+.||...... .....+..+....
T Consensus 157 ---~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~---- 219 (256)
T cd05082 157 ---DTGKLPVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--------DVVPRVEKGYKMD---- 219 (256)
T ss_pred ---CCCccceeecCHHHHccC--CCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHhcCCCCC----
Confidence 122355689999998664 67889999999999999997 88887643221 1122222222211
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
.+..++..+.+++.+||+.+|++|||++++++.|+.
T Consensus 220 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 220 --APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred --CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 112345678999999999999999999999999975
No 192
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.8e-40 Score=292.53 Aligned_cols=253 Identities=22% Similarity=0.267 Sum_probs=198.6
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
..|.+.+.||+|+||.||+|... ++..||+|.++..... ...+.+|+.+++.++||||+++++.+......+++|||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 36778899999999999999865 6889999998765332 356788999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++. ....+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 89 ~~~~L~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd06645 89 GGGSLQDIYH----VTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATI- 160 (267)
T ss_pred CCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-
Confidence 9999998873 345689999999999999999999998 99999999999999999999999999987553221
Q ss_pred ceeeecccCCCCccccccccc-ccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 223 FVSISATRGTIGYIAPELISR-NFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~-~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
.......|+..|+|||.+.. ..+.++.++|+||+||++|+|++|..||....... ............. .
T Consensus 161 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~-------~~~~~~~~~~~~~--~ 230 (267)
T cd06645 161 -AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-------ALFLMTKSNFQPP--K 230 (267)
T ss_pred -cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh-------hHHhhhccCCCCC--c
Confidence 11234468999999998742 12357889999999999999999999986543211 0111111111111 0
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
... ...++..+.+++.+||+.+|++|||++++++
T Consensus 231 ~~~-~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 231 LKD-KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ccc-cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 000 1124557899999999999999999999876
No 193
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=9.2e-40 Score=293.30 Aligned_cols=250 Identities=27% Similarity=0.453 Sum_probs=194.1
Q ss_pred cccCCCCcEEEEEEEEc-CCc--eeEEEEeccCc--cCHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGG--LIAVKMLENSK--FSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~--~vaiK~~~~~~--~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|+||.||+|..+ ++. .+++|.++... ...+.+.+|+.++.++ +||||+++++++......+++|||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 35899999999999876 343 46888887532 2336788999999999 799999999999999999999999999
Q ss_pred CCccccccCCC------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeecc
Q 048542 145 GSLDRHVFPKE------------SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFG 212 (373)
Q Consensus 145 gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg 212 (373)
++|.+++.... .....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 99998885432 1223578999999999999999999998 99999999999999999999999999
Q ss_pred CcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHH
Q 048542 213 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQL 291 (373)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~ 291 (373)
++...... ........+..|+|||.+.+. .++.++|+||||+++|+|++ |..||...... ......
T Consensus 158 l~~~~~~~---~~~~~~~~~~~y~apE~~~~~--~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--------~~~~~~ 224 (270)
T cd05047 158 LSRGQEVY---VKKTMGRLPVRWMAIESLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELYEKL 224 (270)
T ss_pred Cccccchh---hhccCCCCccccCChHHHccC--CCCchhhHHHHHHHHHHHHcCCCCCccccCHH--------HHHHHH
Confidence 98532111 111112345679999988654 67889999999999999997 99998643321 112222
Q ss_pred hcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCC
Q 048542 292 NKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342 (373)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~ 342 (373)
..+...... ...+..+.+++.+||+.+|.+|||+.+++..|+.++
T Consensus 225 ~~~~~~~~~------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 225 PQGYRLEKP------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred hCCCCCCCC------CcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 222222111 223457899999999999999999999999998764
No 194
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.1e-39 Score=292.38 Aligned_cols=256 Identities=22% Similarity=0.345 Sum_probs=188.7
Q ss_pred cccCCCCcEEEEEEEEcCCc---eeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 71 HKLGQGGFGSVYKGQLQTGG---LIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~---~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
+.||+|+||.||+|...++. .+++|.+..... ..+.+.+|+.+++.++||||+++++.+......++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 36999999999999755433 456676654332 3467899999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCcee
Q 048542 146 SLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 225 (373)
Q Consensus 146 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 225 (373)
+|.+++..........++..+..++.|++.||+|||+. +++||||||+|||++.++.++|+|||++...........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99998854433334567778889999999999999998 999999999999999999999999999864322211111
Q ss_pred eecccCCCCcccccccccc-----cCCcCcccchHHHHHHHHHHHcC-CCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 226 ISATRGTIGYIAPELISRN-----FGTVSCKSDVYGFGMVLLEMAGG-RRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 226 ~~~~~gt~~y~aPE~~~~~-----~~~~s~~~DvwslG~~l~~ll~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
.....++..|+|||.+... ...++.++||||||+++|+|+++ ..||...... ......... .....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-------~~~~~~~~~-~~~~~ 229 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR-------EVLNHVIKD-QQVKL 229 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHhh-ccccc
Confidence 2344578899999987532 12356789999999999999975 5566432211 111111111 11111
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
.. ......++..+.+++..|| .+|++||+++++++.|.
T Consensus 230 ~~-~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 230 FK-PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CC-CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 11 1112234567888999999 67999999999999874
No 195
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.4e-40 Score=304.70 Aligned_cols=239 Identities=23% Similarity=0.289 Sum_probs=190.8
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccC-CCceeeEeeEeeeCCeeEEEEe
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~e 140 (373)
+++.+.||+|+||.||+|..+ +|+.||+|++.... ...+.+..|..++..+. |++|+++++++......|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 456789999999999999865 68899999987532 22345678888888875 5778889999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++|+|.+++. ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++......
T Consensus 82 y~~~g~L~~~i~----~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 82 YVNGGDLMYHIQ----QVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred CCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 999999988873 345689999999999999999999998 9999999999999999999999999998753222
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.. ......||+.|+|||.+.+. .++.++|+||+||++|+|++|..||...... .....+.... .
T Consensus 155 ~~--~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~~~~-~--- 218 (323)
T cd05615 155 GV--TTRTFCGTPDYIAPEIIAYQ--PYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--------ELFQSIMEHN-V--- 218 (323)
T ss_pred Cc--cccCccCCccccCHHHHcCC--CCCCccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCC-C---
Confidence 11 12334589999999998764 6788999999999999999999999754321 1122222211 1
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSM 331 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 331 (373)
..+..++..+.+++.+||+.+|.+|++.
T Consensus 219 ---~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 219 ---SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1223345678999999999999999985
No 196
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.3e-39 Score=300.48 Aligned_cols=263 Identities=16% Similarity=0.229 Sum_probs=194.0
Q ss_pred hhcccCCC--CcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 69 FTHKLGQG--GFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 69 ~~~~ig~G--~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
+.+.||+| +|++||++..+ +|+.||+|.++..... .+.+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 78899999865 7899999999765332 245778999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++.... ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.++++||+.+........
T Consensus 82 ~~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 82 AYGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CCCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 9999999884332 24588999999999999999999998 999999999999999999999999986543221111
Q ss_pred ce-----eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccc-----ccchH------H
Q 048542 223 FV-----SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSK-----AYFPS------W 286 (373)
Q Consensus 223 ~~-----~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~-----~~~~~------~ 286 (373)
.. ......++..|+|||.+.+....++.++|||||||++|+|++|+.||......... ...+. .
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 00 01123466789999998764346788999999999999999999999743221100 00000 0
Q ss_pred HHHHHh-----cCCCc---------------ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 287 VYDQLN-----KGGDL---------------ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 287 ~~~~~~-----~~~~~---------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...... .+... ...........++..+.+|+.+||+.||++|||++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 000000 00000 000001122345678999999999999999999999986
No 197
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.3e-39 Score=294.37 Aligned_cols=262 Identities=28% Similarity=0.432 Sum_probs=197.8
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-----CCceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEeee--CCeeEE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-----TGGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFCSE--GSKRAL 137 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~~l 137 (373)
.+++.+.||+|+||.||++..+ ++..||+|.+...... .+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 4567799999999999999742 5778999998765432 3678899999999999999999998743 346889
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
||||+++++|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 85 v~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 85 VMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred EEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 99999999999988422 34588999999999999999999998 9999999999999999999999999999866
Q ss_pred CCCCCceee-ecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccc-----c---ccchHHHH
Q 048542 218 PKENDFVSI-SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSS-----K---AYFPSWVY 288 (373)
Q Consensus 218 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~-----~---~~~~~~~~ 288 (373)
......... ....++..|+|||.+.+. .++.++|+||||+++|+|++|..|+........ . ........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05081 159 PQDKEYYKVREPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLI 236 (284)
T ss_pred cCCCcceeecCCCCCceEeeCHHHhccC--CcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHH
Confidence 443322111 112234569999998654 678899999999999999998876543221100 0 00001111
Q ss_pred HHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 289 DQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
+.+....... .+..++..+.+|+.+||+.+|++|||+.++++.|+.+
T Consensus 237 ~~~~~~~~~~------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 237 ELLKNNGRLP------APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHhcCCcCC------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 1122221111 1123456799999999999999999999999999864
No 198
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=9.3e-40 Score=290.62 Aligned_cols=248 Identities=25% Similarity=0.357 Sum_probs=202.0
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
.|++.+.||+|+||.||+|... ++..+++|.+..... .+++.+|+..++.++||||+++++++..+...++++||+++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 82 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGA 82 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCC
Confidence 5677889999999999999976 478999999876543 67899999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|.+++.. .+..+++..+..++.|+++|+.|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 83 ~~L~~~l~~---~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-- 154 (256)
T cd06612 83 GSVSDIMKI---TNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-- 154 (256)
T ss_pred CcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCcc--
Confidence 999988732 245689999999999999999999998 999999999999999999999999999886543321
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......++..|+|||.+.+. .++.++||||||+++|+|++|+.||........ .......... ...
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~----~~~ 220 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEI--GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA--------IFMIPNKPPP----TLS 220 (256)
T ss_pred ccccccCCccccCHHHHhcC--CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh--------hhhhccCCCC----CCC
Confidence 12234478899999998765 678899999999999999999999875432211 0001111111 111
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.+..++..+.+++.+||+.||++|||++++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 221 DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 22345678999999999999999999999986
No 199
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.2e-40 Score=298.58 Aligned_cols=249 Identities=26% Similarity=0.346 Sum_probs=197.2
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC----HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS----AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
|+..+.||+|+||.||++... +++.||+|.+...... ...+.+|+.+++.++|+|++.+++.+.+....+++|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 456688999999999999865 7889999998754322 24567899999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++++|.+++.... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 82 MNGGDLKFHIYHMG--EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred cCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 99999988874322 34588999999999999999999998 99999999999999999999999999987543322
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
. .....|+..|+|||.+.+. .++.++|+||+|+++|+|++|+.||......... .......... .
T Consensus 157 ~---~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~----~~~~~~~~~~-~----- 221 (285)
T cd05630 157 T---IKGRVGTVGYMAPEVVKNE--RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR----EEVERLVKEV-Q----- 221 (285)
T ss_pred c---ccCCCCCccccChHHHcCC--CCCCccccHHHHHHHHHHHhCCCCCCCCCccchH----HHHHhhhhhh-h-----
Confidence 1 1234689999999998764 6888999999999999999999999754322110 0011111100 0
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCC-----HHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPS-----MTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps-----~~ell~ 336 (373)
...+..++..+.+|+.+||+.||++||| ++|+++
T Consensus 222 -~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 222 -EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred -hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 1112334567899999999999999999 788876
No 200
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.8e-39 Score=290.11 Aligned_cols=240 Identities=23% Similarity=0.353 Sum_probs=185.6
Q ss_pred cccCCCCcEEEEEEEEcC-------------CceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeE
Q 048542 71 HKLGQGGFGSVYKGQLQT-------------GGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~-------------~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 136 (373)
+.||+|+||.||+|...+ ...+++|.+...... ...+.+|+.++..++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999997532 225888987654433 256788999999999999999999999988999
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCc-------eEEe
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFI-------PKVS 209 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~-------~kl~ 209 (373)
++|||+++++|..++.. ....+++..+..++.|+++||+|||++ +++||||||+|||++.++. ++++
T Consensus 81 lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 81 MVEEFVEFGPLDLFMHR---KSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEecccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeC
Confidence 99999999999877632 235689999999999999999999998 9999999999999986654 8999
Q ss_pred eccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHH-cCCCCCCCCcCccccccchHHHH
Q 048542 210 DFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA-GGRRNSNMNATRSSKAYFPSWVY 288 (373)
Q Consensus 210 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll-~g~~p~~~~~~~~~~~~~~~~~~ 288 (373)
|||++...... ....++..|+|||.+... ..++.++|||||||++|+|+ .|..|+....... ..
T Consensus 155 d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--------~~ 219 (262)
T cd05077 155 DPGIPITVLSR------QECVERIPWIAPECVEDS-KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--------KE 219 (262)
T ss_pred CCCCCccccCc------ccccccccccChhhhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--------HH
Confidence 99998654322 233478889999988632 46788999999999999998 5777765432111 11
Q ss_pred HHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 289 DQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
....... .. . ...+..+.+|+.+||+.||.+||++.++++.|+
T Consensus 220 -~~~~~~~-~~--~----~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 220 -RFYEGQC-ML--V----TPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred -HHHhcCc-cC--C----CCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 1111110 00 0 112357899999999999999999999998764
No 201
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.7e-40 Score=328.24 Aligned_cols=261 Identities=23% Similarity=0.292 Sum_probs=200.9
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
+|++.++||+|+||.||+|.+. +++.||+|++..... ..+++.+|+.+++.++||||+++++++.+++..+++||
T Consensus 3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVME 82 (932)
T PRK13184 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMP 82 (932)
T ss_pred CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEE
Confidence 4677899999999999999865 688999999875422 23578899999999999999999999999999999999
Q ss_pred ccCcCCccccccCCC-------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccC
Q 048542 141 YMPNGSLDRHVFPKE-------SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGL 213 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~-------~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~ 213 (373)
|+++++|.+++.... ......++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||+
T Consensus 83 Y~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGL 159 (932)
T PRK13184 83 YIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGA 159 (932)
T ss_pred cCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecCc
Confidence 999999988874321 1123456678889999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCc----------------eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCc
Q 048542 214 AKFHPKENDF----------------VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATR 277 (373)
Q Consensus 214 ~~~~~~~~~~----------------~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~ 277 (373)
+......... .......||+.|+|||.+.+. .++.++||||+||++|+|++|..||......
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~--~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGV--PASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCC--CCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 9765211100 001124599999999998765 6788999999999999999999999753321
Q ss_pred cccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCC-CHHHHHHHHhcCCC
Q 048542 278 SSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRP-SMTKVLEMLEGSID 343 (373)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~ell~~L~~~~~ 343 (373)
.. ... ......... .....++..+.+++.+||+.||++|| +++++++.|+..+.
T Consensus 238 ki-------~~~----~~i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 238 KI-------SYR----DVILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hh-------hhh----hhccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 10 000 000000000 00123456788999999999999995 67888888876544
No 202
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-39 Score=296.52 Aligned_cols=247 Identities=26% Similarity=0.352 Sum_probs=199.6
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
+|.+.+.||.|+||.||+|... +++.+++|.+...... .+.+.+|+.+++.++|+|++++++.+..+...++||||++
T Consensus 21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~ 100 (296)
T cd06654 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (296)
T ss_pred ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccC
Confidence 5667789999999999999864 6889999988764433 4678899999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++. ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.........
T Consensus 101 ~~~L~~~~~-----~~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 172 (296)
T cd06654 101 GGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (296)
T ss_pred CCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence 999998873 23578899999999999999999998 9999999999999999999999999998754332211
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
.....+++.|+|||.+.+. .++.++|||||||++|+|++|+.||....... ...... ........
T Consensus 173 --~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~-------~~~~~~-~~~~~~~~--- 237 (296)
T cd06654 173 --RSTMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-------ALYLIA-TNGTPELQ--- 237 (296)
T ss_pred --cCcccCCccccCHHHHcCC--CCCccchHHHHHHHHHHHHhCCCCCCCCCHHH-------hHHHHh-cCCCCCCC---
Confidence 1234588899999998764 67889999999999999999999997544311 111111 11111111
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.+..++..+.+++.+||+.+|++|||++++++
T Consensus 238 -~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 238 -NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred -CccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 12345667899999999999999999999997
No 203
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=6.4e-40 Score=293.96 Aligned_cols=251 Identities=25% Similarity=0.436 Sum_probs=196.6
Q ss_pred cccCCCCcEEEEEEEEcC-------CceeEEEEeccCc--cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 71 HKLGQGGFGSVYKGQLQT-------GGLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~-------~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
+.||+|+||.||+|..++ +..+|+|.+.... .....+.+|+.+++.++||||+++++++......+++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2578999886543 2346788999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC-----ceEEeeccC
Q 048542 142 MPNGSLDRHVFPKES---RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF-----IPKVSDFGL 213 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~-----~~kl~Dfg~ 213 (373)
+++++|.+++..... ....+++..+..++.|++.||+|||+. +++|+||||+||+++.++ .++|+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999998854321 234578899999999999999999998 999999999999999877 899999999
Q ss_pred cccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHh
Q 048542 214 AKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLN 292 (373)
Q Consensus 214 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 292 (373)
+................++..|+|||.+.+. .++.++|||||||++|+|++ |..||....... ......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~--------~~~~~~ 227 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDG--KFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--------VLQHVT 227 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccC--CcccchhHHHHHHHHHHHHHcCCCCCcccCHHH--------HHHHHh
Confidence 8755433221111223456789999998764 78899999999999999998 898886433211 112222
Q ss_pred cCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 293 KGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
.+.... .+..++..+.+++.+||+.+|.+||+++++++.|+.
T Consensus 228 ~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 228 AGGRLQ------KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred cCCccC------CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 222111 123346788999999999999999999999999863
No 204
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2e-39 Score=287.73 Aligned_cols=247 Identities=27% Similarity=0.456 Sum_probs=196.6
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCcc
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLD 148 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~ 148 (373)
++||.|+||.||++...+++.||+|.+...... ...+.+|+.+++.++|+||+++++++.+....+++|||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 468999999999999777999999998765443 467889999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeec
Q 048542 149 RHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 228 (373)
Q Consensus 149 ~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 228 (373)
+++... ...+++..+..++.+++.|+.|||++ +++||||||+||+++.++.++|+|||.+..............
T Consensus 81 ~~l~~~---~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 81 TFLRKK---KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 887432 34578899999999999999999998 999999999999999999999999999875542211111112
Q ss_pred ccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhH
Q 048542 229 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIES 307 (373)
Q Consensus 229 ~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
..++..|+|||.+.+. .++.++|+||||+++|+|++ |..||....... ............ .+.
T Consensus 155 ~~~~~~y~~PE~~~~~--~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~--------~~~~~~~~~~~~------~~~ 218 (251)
T cd05041 155 KQIPIKWTAPEALNYG--RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ--------TRERIESGYRMP------APQ 218 (251)
T ss_pred CcceeccCChHhhccC--CCCcchhHHHHHHHHHHHHhccCCCCccCCHHH--------HHHHHhcCCCCC------CCc
Confidence 2245679999988654 67889999999999999999 777775543211 112222221111 122
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 308 MIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 308 ~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
..+..+.+++.+||+.+|++|||++|+++.|+
T Consensus 219 ~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 219 LCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred cCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 34567999999999999999999999999886
No 205
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=4.6e-40 Score=305.48 Aligned_cols=257 Identities=22% Similarity=0.262 Sum_probs=191.9
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeC------Ce
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEG------SK 134 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------~~ 134 (373)
.+|.+.+.||+|+||.||+|... +++.||+|.+..... ....+.+|+.+++.++||||+++++++... ..
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE 94 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence 46778899999999999999865 778999999875432 235677899999999999999999987543 34
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
.+++++++ +++|.+++. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 95 ~~~~~~~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 95 VYLVTNLM-GADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred EEEEeecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccc
Confidence 68999988 778877662 34689999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc-------hHHH
Q 048542 215 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF-------PSWV 287 (373)
Q Consensus 215 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~-------~~~~ 287 (373)
...... .....||..|+|||++.+. ..++.++|||||||++|+|++|+.||............ ....
T Consensus 166 ~~~~~~-----~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07878 166 RQADDE-----MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEV 239 (343)
T ss_pred eecCCC-----cCCccccccccCchHhcCC-ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 865432 1234689999999998653 36788999999999999999999999754321100000 0000
Q ss_pred HHHH---------hcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 288 YDQL---------NKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 288 ~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...+ ..................+..+.+|+.+||+.||.+|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 240 LKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 000000000000111122345789999999999999999999985
No 206
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.5e-39 Score=292.08 Aligned_cols=252 Identities=25% Similarity=0.354 Sum_probs=198.2
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhccc-CCCceeeEeeEeeeC------CeeE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLGFCSEG------SKRA 136 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~------~~~~ 136 (373)
..|++.+.||+|+||.||+|... +++.+|+|.+.........+.+|+.+++.+ +|+|++++++++... ...+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 85 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEE
Confidence 35677789999999999999865 678999999987666667888999999998 699999999998653 4678
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
++|||+++++|.+++... ....+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++..
T Consensus 86 iv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 86 LVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred EEEEcCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 999999999999988432 235688999999999999999999998 999999999999999999999999999875
Q ss_pred CCCCCCceeeecccCCCCcccccccccc---cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhc
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRN---FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 293 (373)
...... ......|+..|+|||.+.+. ...++.++|+||+||++|+|++|..||....... .......
T Consensus 161 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~--------~~~~~~~ 230 (272)
T cd06637 161 LDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--------ALFLIPR 230 (272)
T ss_pred cccccc--cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH--------HHHHHhc
Confidence 432211 12334588999999988532 2357789999999999999999999986433211 0111111
Q ss_pred CCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 GGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...... ....++..+.+|+.+||+.+|.+|||++++++
T Consensus 231 ~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 231 NPAPRL-----KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCCCCC-----CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 111111 11234567899999999999999999999976
No 207
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.9e-40 Score=306.66 Aligned_cols=258 Identities=21% Similarity=0.223 Sum_probs=192.9
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeC------Ce
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEG------SK 134 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------~~ 134 (373)
.+|++.+.||+|+||.||++... +++.+|+|.+...... ...+.+|+.+++.++||||+++++++... ..
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 96 (355)
T cd07874 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD 96 (355)
T ss_pred hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence 46778899999999999999865 6889999998754322 35677899999999999999999988543 35
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
.+++|||+++ ++.+.+ ...+++..+..++.|+++||.|||++ +++||||||+|||++.++.+||+|||++
T Consensus 97 ~~lv~e~~~~-~l~~~~------~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 97 VYLVMELMDA-NLCQVI------QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred eEEEhhhhcc-cHHHHH------hhcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCccc
Confidence 7999999965 565555 13478889999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccc--------cch--
Q 048542 215 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKA--------YFP-- 284 (373)
Q Consensus 215 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~--------~~~-- 284 (373)
....... ......||..|+|||.+.+. .++.++|||||||++|+|++|+.||.......... ..+
T Consensus 167 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (355)
T cd07874 167 RTAGTSF---MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241 (355)
T ss_pred ccCCCcc---ccCCccccCCccCHHHHcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 7543322 12334689999999998764 68889999999999999999999997543211000 000
Q ss_pred -----HHHHHHHhcCCCc---c---------cCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 285 -----SWVYDQLNKGGDL---E---------LQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 285 -----~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
............. . .+.....+...+..+.+|+.+||+.||++|||++|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0000011100000 0 000011122235678999999999999999999999984
No 208
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.1e-39 Score=290.36 Aligned_cols=247 Identities=29% Similarity=0.452 Sum_probs=196.6
Q ss_pred cccCCCCcEEEEEEEEcC--Cc--eeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQT--GG--LIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~--~~--~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||+|++|.||+|.+.+ +. .+|+|.+..... ..+++.+|+.+++.++||||+++++.+.. ...+++|||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998653 22 589999987655 34678899999999999999999999988 889999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|.+++..... ..+++..++.++.|++.||+|||++ +++|+||+|+||+++.++.+||+|||++..........
T Consensus 80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 999998854321 4689999999999999999999998 99999999999999999999999999998664432221
Q ss_pred -eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHh-cCCCcccCc
Q 048542 225 -SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLN-KGGDLELQN 301 (373)
Q Consensus 225 -~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 301 (373)
......++..|+|||.+.+. .++.++|||||||++|+|++ |..||....... ...... ......
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--------~~~~~~~~~~~~~--- 221 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTR--TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--------ILKKIDKEGERLE--- 221 (257)
T ss_pred ecccCCCCCceecCHHHhccc--CcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHhcCCcCC---
Confidence 11234477889999988764 67889999999999999998 999986433211 111111 111111
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
.+..++..+.+++.+||+.+|++|||+.++++.|.
T Consensus 222 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 222 ---RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ---CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 11234567899999999999999999999999875
No 209
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=7.5e-40 Score=299.51 Aligned_cols=254 Identities=22% Similarity=0.311 Sum_probs=196.3
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
|++.+.||+|+||.||++.+. ++..+|+|.+..... ...++.+|+++++.++||||+++++++.++...+++|||++
T Consensus 3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~ 82 (308)
T cd06615 3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMD 82 (308)
T ss_pred ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccC
Confidence 567789999999999999865 678899998875422 23568899999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++. +...+++..+..++.|+++||.|||+. .+++|+||||+||+++.++.++|+|||++.......
T Consensus 83 ~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-- 154 (308)
T cd06615 83 GGSLDQVLK----KAGRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-- 154 (308)
T ss_pred CCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCcccccccc--
Confidence 999999883 235688999999999999999999972 289999999999999999999999999986543221
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHH-----------------
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSW----------------- 286 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~----------------- 286 (373)
.....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...........+...
T Consensus 155 --~~~~~~~~~~~aPE~~~~~--~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 155 --ANSFVGTRSYMSPERLQGT--HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred --cccCCCCcCccChhHhcCC--CCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCC
Confidence 1234688999999998664 6788999999999999999999998643321100000000
Q ss_pred -----------HHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 287 -----------VYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 287 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
..........+..+ ...++..+.+++.+||+.+|++|||++++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPPKLP-----SGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCccCc-----CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000000000 01245679999999999999999999999874
No 210
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=7.7e-40 Score=295.94 Aligned_cols=262 Identities=23% Similarity=0.302 Sum_probs=195.9
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|.+.+.||+|++|.||+|..+ ++..||+|.+..... ....+.+|+.+++.++|||++++++++.++...++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL 81 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence 566789999999999999875 688999999865422 2367789999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
+ ++|.+++.... .+..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 82 ~-~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 82 S-MDLKKYLDSLP-KGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred C-CCHHHHHhcCC-CCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 6 57877764322 235689999999999999999999998 999999999999999999999999999875433221
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc---------chHHH----HH
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY---------FPSWV----YD 289 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~---------~~~~~----~~ 289 (373)
......+++.|+|||.+.+. ..++.++|||||||++|+|++|+.||........... ...|. ..
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 157 --VYTHEVVTLWYRAPEVLLGS-PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred --cccCCcccccccChHHhcCC-CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhH
Confidence 12233578899999988653 3567899999999999999999999875432110000 00000 00
Q ss_pred HHhcCC-CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 290 QLNKGG-DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 290 ~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...... .............++.++.+++.+||+.||++|||++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 234 DYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000 00000001111235678899999999999999999999975
No 211
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=306.05 Aligned_cols=251 Identities=25% Similarity=0.419 Sum_probs=206.6
Q ss_pred hhhcccCCCCcEEEEEEEEc---CCc--eeEEEEeccCc--cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 68 HFTHKLGQGGFGSVYKGQLQ---TGG--LIAVKMLENSK--FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~~---~~~--~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.+.+.||.|-||.||+|... .|+ .||||..+.+. .+.+.|+.|..+|++++||||++++|+|.+ ...++|||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmE 470 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVME 470 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEe
Confidence 45588999999999999854 233 58999887643 345889999999999999999999999986 57899999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
.++-|.|..++. .+...++......++.||+.||+|||+. .+|||||..+|||+.....+||+|||+++++.+.
T Consensus 471 L~~~GELr~yLq---~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 471 LAPLGELREYLQ---QNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDD 544 (974)
T ss_pred cccchhHHHHHH---hccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence 999999999994 3446688888899999999999999998 9999999999999999999999999999988776
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
..+... ...-+..|||||.+.- ..++.++|||.||+.+||++. |..||..-.+.. +...+++|.++
T Consensus 545 ~yYkaS-~~kLPIKWmaPESINf--RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD--------VI~~iEnGeRl-- 611 (974)
T KOG4257|consen 545 AYYKAS-RGKLPIKWMAPESINF--RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD--------VIGHIENGERL-- 611 (974)
T ss_pred chhhcc-ccccceeecCccccch--hcccchhhHHHHHHHHHHHHHhcCCccccccccc--------eEEEecCCCCC--
Confidence 655443 4446778999998854 489999999999999999985 889987544322 11223344333
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCC
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~ 342 (373)
+.|+.++..+..|+.+||..+|.+||++.++...|+.++
T Consensus 612 ----P~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 612 ----PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred ----CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 344566788999999999999999999999988877543
No 212
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=5.4e-40 Score=297.45 Aligned_cols=255 Identities=24% Similarity=0.367 Sum_probs=189.8
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhccc---CCCceeeEeeEeee-----CCe
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRI---HHVNVVQLLGFCSE-----GSK 134 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l---~h~ni~~~~~~~~~-----~~~ 134 (373)
|++.+.||+|+||.||+|..+ +++.||+|.++.... ....+.+|+.+++.+ +||||+++++++.. ...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 667789999999999999866 788999999875322 223456777777665 69999999998754 345
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
.+++|||+++ +|.+++... ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 82 ~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 82 VTLVFEHVDQ-DLRTYLDKV--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred EEEEEccccc-CHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcc
Confidence 7899999964 787776432 234589999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhc-
Q 048542 215 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK- 293 (373)
Q Consensus 215 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~- 293 (373)
........ .....|+..|+|||.+.+. .++.++||||+||++|+|++|.+||.......... ........
T Consensus 156 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~----~~~~~~~~~ 226 (288)
T cd07863 156 RIYSCQMA---LTPVVVTLWYRAPEVLLQS--TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG----KIFDLIGLP 226 (288)
T ss_pred ccccCccc---CCCccccccccCchHhhCC--CCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHH----HHHHHhCCC
Confidence 76543221 1234578999999998764 68899999999999999999999986543211000 00000000
Q ss_pred -------CC-----Cc---ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 -------GG-----DL---ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 -------~~-----~~---~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.. .. ...........++..+.+++.+||+.||++|||+.|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 227 PEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00 00 000011222345667899999999999999999999985
No 213
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1e-39 Score=295.36 Aligned_cols=256 Identities=23% Similarity=0.302 Sum_probs=199.0
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhccc-CCCceeeEeeEee-----eCCeeEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLGFCS-----EGSKRAL 137 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~-----~~~~~~l 137 (373)
.+|++.+.||+|+||.||++... +++.+|+|++.........+.+|+.+++.+ +||||+++++++. .+...++
T Consensus 18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~l 97 (286)
T cd06638 18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWL 97 (286)
T ss_pred cceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEE
Confidence 35677799999999999999865 678999998876555556788899999999 6999999999873 3456899
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
+|||+++++|.+++.........+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++...
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 174 (286)
T cd06638 98 VLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGVSAQL 174 (286)
T ss_pred EEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEccCCceeec
Confidence 9999999999887754333456688999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCCCceeeecccCCCCcccccccccc---cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcC
Q 048542 218 PKENDFVSISATRGTIGYIAPELISRN---FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKG 294 (373)
Q Consensus 218 ~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 294 (373)
..... ......|+..|+|||.+... ...++.++||||+||++|+|++|+.||........ . ......
T Consensus 175 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~-------~-~~~~~~ 244 (286)
T cd06638 175 TSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA-------L-FKIPRN 244 (286)
T ss_pred ccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-------H-hhcccc
Confidence 43221 12234589999999987532 13578899999999999999999999875432110 0 011111
Q ss_pred CCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 295 GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
...... .+..++..+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 245 PPPTLH----QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred CCCccc----CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 111111 112234578999999999999999999999874
No 214
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4.7e-40 Score=307.30 Aligned_cols=248 Identities=23% Similarity=0.287 Sum_probs=193.6
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
|++.+.||+|+||.||++..+ +++.||+|+++... .....+.+|..++..++||||+++++.+.+....++||||
T Consensus 3 f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~ 82 (360)
T cd05627 3 FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEF 82 (360)
T ss_pred ceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeC
Confidence 566789999999999999865 68899999987532 2235678899999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++|+|.+++. +...+++..+..++.|++.||.|||+. +++||||||+|||++.++.++|+|||++.......
T Consensus 83 ~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 83 LPGGDMMTLLM----KKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred CCCccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 99999999883 345689999999999999999999998 99999999999999999999999999987442211
Q ss_pred Cc---------------------------------eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCC
Q 048542 222 DF---------------------------------VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268 (373)
Q Consensus 222 ~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~ 268 (373)
.. .......||+.|+|||++.+. .++.++|||||||++|+|++|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~--~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT--GYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC--CCCCcceeccccceeeecccCC
Confidence 00 001134699999999998765 6888999999999999999999
Q ss_pred CCCCCCcCccccccchHHHHHHHhc-CCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCC---HHHHHH
Q 048542 269 RNSNMNATRSSKAYFPSWVYDQLNK-GGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPS---MTKVLE 336 (373)
Q Consensus 269 ~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~ell~ 336 (373)
.||....... ....+.. ......+.. ..++..+.+|+.+|+ .||.+|++ ++++++
T Consensus 234 ~Pf~~~~~~~--------~~~~i~~~~~~~~~p~~----~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 234 PPFCSETPQE--------TYRKVMNWKETLVFPPE----VPISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCCCCHHH--------HHHHHHcCCCceecCCC----CCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 9997544321 1122221 111111111 124567888998876 49999996 555554
No 215
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=7.9e-40 Score=296.05 Aligned_cols=249 Identities=25% Similarity=0.329 Sum_probs=196.2
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC----HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS----AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
|+..+.||+|+||+||+|... +++.+|+|.+...... ...+.+|+.+++.++|+|++.+++.+..++..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 445688999999999999865 7889999998754322 24567899999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++++|.+.+... ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 82 MNGGDLKFHIYNM--GNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred ccCccHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 9999998777432 234689999999999999999999998 99999999999999999999999999987543322
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
. .....|+..|+|||.+.+. .++.++|+||+|+++|+|++|..||........ ............
T Consensus 157 ~---~~~~~g~~~~~aPE~~~~~--~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~----~~~~~~~~~~~~------ 221 (285)
T cd05632 157 S---IRGRVGTVGYMAPEVLNNQ--RYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK----REEVDRRVLETE------ 221 (285)
T ss_pred c---ccCCCCCcCccChHHhcCC--CCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHhhhccc------
Confidence 1 2334689999999998764 688899999999999999999999975432110 001111111111
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCC-----HHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPS-----MTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps-----~~ell~ 336 (373)
...+..++..+.+|+..||+.||++||+ +++++.
T Consensus 222 -~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 222 -EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred -cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 0112334567899999999999999999 666665
No 216
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.7e-39 Score=292.03 Aligned_cols=252 Identities=25% Similarity=0.346 Sum_probs=198.9
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
..|++.++||.|+||.||+|... ++..+++|.+..... ....+.+|+.+++.++|||++++++.+..+...++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 46788899999999999999876 588999999875433 2367888999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|...+.. ....+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 92 ~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 164 (292)
T cd06644 92 PGGAVDAIMLE---LDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL- 164 (292)
T ss_pred CCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccc-
Confidence 99999776632 234589999999999999999999998 99999999999999999999999999886532221
Q ss_pred ceeeecccCCCCcccccccccc---cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 223 FVSISATRGTIGYIAPELISRN---FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~---~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
.......++..|+|||.+.+. ...++.++|+|||||++|+|++|..||...... ..............
T Consensus 165 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~~ 235 (292)
T cd06644 165 -QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSEPPTL 235 (292)
T ss_pred -cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH--------HHHHHHhcCCCccC
Confidence 112334588899999988532 234677899999999999999999998654321 11111111111111
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..+..++.++.+++.+||+.||++||+++++++
T Consensus 236 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 236 ----SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ----CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 112345567899999999999999999999976
No 217
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.1e-39 Score=301.23 Aligned_cols=255 Identities=19% Similarity=0.205 Sum_probs=195.8
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|++.+.||+|+||.||++... +++.||+|++.... .....+.+|..++..++|+||+++++++.++...++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 4677899999999999999865 68899999987522 223557889999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++|+|.+++.. ....+++..+..++.|++.||+|||++ +++||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~g~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 82 YYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred cCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 9999999988832 235688999999999999999999998 9999999999999999999999999998755432
Q ss_pred CCceeeecccCCCCcccccccccc---cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCc
Q 048542 221 NDFVSISATRGTIGYIAPELISRN---FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 297 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (373)
... ......||+.|+|||++.+. .+.++.++||||+||++|+|++|+.||...... .............
T Consensus 156 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~-------~~~~~i~~~~~~~ 227 (331)
T cd05597 156 GTV-QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-------ETYGKIMNHKEHF 227 (331)
T ss_pred CCc-cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH-------HHHHHHHcCCCcc
Confidence 221 11234589999999998631 235678999999999999999999999754321 1111111111111
Q ss_pred ccCccchhhHHHHHHHHHHHHhhcCCCCC--CCCCHHHHHHH
Q 048542 298 ELQNVTEIESMIARKLCMIGLWCIQVKAA--DRPSMTKVLEM 337 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~--~Rps~~ell~~ 337 (373)
.++.. ...++..+.+++.+|+..++. .||+++++++.
T Consensus 228 ~~~~~---~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 228 QFPPD---VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred cCCCc---cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 11111 122566788999998865433 37899888775
No 218
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.9e-40 Score=295.19 Aligned_cols=239 Identities=25% Similarity=0.363 Sum_probs=185.5
Q ss_pred ccCCCCcEEEEEEEEcC-------------------------CceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeE
Q 048542 72 KLGQGGFGSVYKGQLQT-------------------------GGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQL 125 (373)
Q Consensus 72 ~ig~G~~g~V~~~~~~~-------------------------~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~ 125 (373)
.||+|+||.||+|.+.. ...|++|.+...... ...+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 124889988754433 2567889999999999999999
Q ss_pred eeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC-
Q 048542 126 LGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF- 204 (373)
Q Consensus 126 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~- 204 (373)
++++..+...++||||+++|+|..++.. ....+++..+..++.|++.||+|||++ +++||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK---EKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCc
Confidence 9999999999999999999999888732 235688999999999999999999998 999999999999997543
Q ss_pred ------ceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHH-cCCCCCCCCcCc
Q 048542 205 ------IPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA-GGRRNSNMNATR 277 (373)
Q Consensus 205 ------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll-~g~~p~~~~~~~ 277 (373)
.+|++|||++...... ....++..|+|||.+.+. ..++.++||||||+++|+|+ +|..||......
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 228 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGG-NSLSTAADKWSFGTTLLEICFDGEVPLKERTPS 228 (274)
T ss_pred ccCccceeeecCCccccccccc------cccccCCcccCchhhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCccccChH
Confidence 4799999987643221 123477889999988653 46788999999999999995 688888654322
Q ss_pred cccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 278 SSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
. .......... .+ ......+.+++.+||+.+|++|||+.++++.|.
T Consensus 229 ~--------~~~~~~~~~~--~~------~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 229 E--------KERFYEKKHR--LP------EPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred H--------HHHHHHhccC--CC------CCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1 1111111111 11 112346899999999999999999999999874
No 219
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.4e-40 Score=305.75 Aligned_cols=240 Identities=24% Similarity=0.323 Sum_probs=187.0
Q ss_pred cCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhccc---CCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRI---HHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 73 ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l---~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
||+|+||+||+|... +++.||+|++..... .......|..++... .||||+++++.+.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999866 688999999865322 123345566666555 699999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|+|.+.+. ....+++..+..++.|++.||+|||++ +++||||||+|||++.++.+||+|||++........
T Consensus 81 g~L~~~l~----~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~-- 151 (330)
T cd05586 81 GELFWHLQ----KEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK-- 151 (330)
T ss_pred ChHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC--
Confidence 99988773 345689999999999999999999998 999999999999999999999999999875322221
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......||..|+|||.+.+. ..++.++||||+||++|+|++|..||...... .....+..+. ..++.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwslGvil~elltG~~Pf~~~~~~--------~~~~~i~~~~-~~~~~--- 218 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLDE-KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ--------QMYRNIAFGK-VRFPK--- 218 (330)
T ss_pred CccCccCCccccCHHHHcCC-CCCCCccceeccccEEEEeccCCCCCCCCCHH--------HHHHHHHcCC-CCCCC---
Confidence 12345699999999998653 34788999999999999999999999754321 1222222221 11111
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCC----CHHHHHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRP----SMTKVLE 336 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rp----s~~ell~ 336 (373)
..++..+.+++.+||+.||.+|| ++.++++
T Consensus 219 --~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 219 --NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred --ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 12456789999999999999998 4666654
No 220
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-40 Score=301.40 Aligned_cols=252 Identities=21% Similarity=0.280 Sum_probs=200.8
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCcc---CHHHHHHHHHHhcccC-CCceeeEeeEeeeCCeeEE
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKF---SAEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKRAL 137 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~l 137 (373)
+....|++.++||+||.+.||++...+.+.||+|.+..... ...-+.+|+..|.+|+ |.+|+.+++|-..++.+|+
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 34567888899999999999999988888899887765333 3467999999999995 8999999999999999999
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
||||- ..+|...+... ....+.-.+..+..||+.|+.++|+. ||||.||||.|+|+ -.|.+||+|||+|..+
T Consensus 438 vmE~G-d~DL~kiL~k~---~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 438 VMECG-DIDLNKILKKK---KSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLL-VKGRLKLIDFGIANAI 509 (677)
T ss_pred Eeecc-cccHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEE-EeeeEEeeeechhccc
Confidence 99985 56888888432 22333237788999999999999998 99999999999999 6689999999999988
Q ss_pred CCCCCceeeecccCCCCcccccccccccC---------CcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHH
Q 048542 218 PKENDFVSISATRGTIGYIAPELISRNFG---------TVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVY 288 (373)
Q Consensus 218 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---------~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~ 288 (373)
..+.....-...+||+.||+||.+..... ..+.++||||+||+||+|+.|+.||..-.+ .+
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n----------~~ 579 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN----------QI 579 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH----------HH
Confidence 87776666667889999999998854211 266789999999999999999999864321 12
Q ss_pred HHHhcC----CCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 289 DQLNKG----GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 289 ~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..+... ...+++...+ . .++.+++..||..||++|||..|+|+
T Consensus 580 aKl~aI~~P~~~Iefp~~~~---~--~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 580 AKLHAITDPNHEIEFPDIPE---N--DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HHHHhhcCCCccccccCCCC---c--hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 222222 2223333222 1 23899999999999999999999987
No 221
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.8e-39 Score=291.93 Aligned_cols=258 Identities=27% Similarity=0.322 Sum_probs=200.2
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeee--CCeeEEEEec
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSE--GSKRALVYEY 141 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~~lv~e~ 141 (373)
++..+.||.|++|.||++... +++.+|+|.+..... ...++.+|+++++.++||||+++++++.+ ....++||||
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 82 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEY 82 (287)
T ss_pred eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEe
Confidence 456689999999999999975 688999999876443 33678999999999999999999998854 3468999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++++|.+++.........+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (287)
T cd06621 83 CEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL 159 (287)
T ss_pred cCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence 999999887644333456688999999999999999999998 99999999999999999999999999987543221
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
. ....++..|+|||.+.+. .++.++|+||+||++|+|++|..||........ .+..............+..
T Consensus 160 ~----~~~~~~~~y~~pE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd06621 160 A----GTFTGTSFYMAPERIQGK--PYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL---GPIELLSYIVNMPNPELKD 230 (287)
T ss_pred c----ccccCCccccCHHHhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC---ChHHHHHHHhcCCchhhcc
Confidence 1 123478899999988664 778899999999999999999999976533111 1111122222212222221
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
........+..+.+++.+||+.+|.+|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 231 EPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 11111234678999999999999999999999988
No 222
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=7.8e-40 Score=298.45 Aligned_cols=261 Identities=23% Similarity=0.349 Sum_probs=196.9
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
.|.+.+.||+|+||.||+|..+ +++.||+|.++.... ....+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~ 86 (301)
T cd07873 7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL 86 (301)
T ss_pred ceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEecc
Confidence 5677899999999999999865 678999999875432 3356788999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
+ ++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 87 ~-~~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 87 D-KDLKQYLDD---CGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred c-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 6 588777632 234588999999999999999999998 999999999999999999999999999875432221
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc-------hHHHHHHH-hcC
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF-------PSWVYDQL-NKG 294 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~-------~~~~~~~~-~~~ 294 (373)
......+++.|+|||.+.+. ..++.++|||||||++|+|++|+.||...........+ ....+... ...
T Consensus 160 --~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
T cd07873 160 --TYSNEVVTLWYRPPDILLGS-TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 236 (301)
T ss_pred --cccccceeecccCcHHHhCC-CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccc
Confidence 12234578899999988653 35778999999999999999999999755432100000 00000000 000
Q ss_pred --CCcccCc-----cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 295 --GDLELQN-----VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 295 --~~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.....+. .......++..+.+|+.+||+.||.+|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000 01111234667899999999999999999999986
No 223
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2e-39 Score=303.54 Aligned_cols=259 Identities=21% Similarity=0.225 Sum_probs=193.1
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc---cCHHHHHHHHHHhcccCCCceeeEeeEeeeC------C
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK---FSAEEFINEVSTIGRIHHVNVVQLLGFCSEG------S 133 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------~ 133 (373)
..+|++.+.||+|+||.||++... +++.||||++.... .....+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 346788899999999999999865 68899999987532 2235678999999999999999999987543 3
Q ss_pred eeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccC
Q 048542 134 KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGL 213 (373)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~ 213 (373)
..|+||||+++ +|.+.+. ..+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred eEEEEEeCCCC-CHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 57999999965 6666552 3478888999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc--------chH
Q 048542 214 AKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY--------FPS 285 (373)
Q Consensus 214 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~--------~~~ 285 (373)
+....... ......+|..|+|||.+.+. .++.++|||||||++|+|++|+.||........... .+.
T Consensus 173 a~~~~~~~---~~~~~~~t~~y~aPE~~~~~--~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 247 (364)
T cd07875 173 ARTAGTSF---MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE 247 (364)
T ss_pred ccccCCCC---cccCCcccCCcCCHHHHhCC--CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 97653321 12334689999999999764 788899999999999999999999975442110000 000
Q ss_pred H-------HHHHHhcCCCc------------ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 286 W-------VYDQLNKGGDL------------ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 286 ~-------~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
+ ........... ..+.........+..+.+|+.+||+.||.+|||++++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 00000000000 0000011111234578999999999999999999999873
No 224
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.8e-39 Score=291.26 Aligned_cols=256 Identities=24% Similarity=0.368 Sum_probs=201.1
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEcC----CceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEE
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQT----GGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAL 137 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~~----~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 137 (373)
..++.+.+.||+|+||.||+|...+ ...++||....... ..+.+.+|+.+++.++||||+++++++.+ ...++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 3456778999999999999998643 24689998875432 33678999999999999999999998875 45789
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
+|||+++++|.+++... ...+++..+..++.+++.||.|||+. +++|+||||+||+++.++.++|+|||++...
T Consensus 84 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 84 VMELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEcCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeec
Confidence 99999999999988432 34589999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCC
Q 048542 218 PKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGD 296 (373)
Q Consensus 218 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
...... ......++..|+|||.+.+. .++.++||||||+++|+|++ |..||....... .......+..
T Consensus 158 ~~~~~~-~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--------~~~~~~~~~~ 226 (270)
T cd05056 158 EDESYY-KASKGKLPIKWMAPESINFR--RFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--------VIGRIENGER 226 (270)
T ss_pred ccccce-ecCCCCccccccChhhhccC--CCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--------HHHHHHcCCc
Confidence 443221 11223345689999988654 67889999999999999986 999986544221 1122233222
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
...+ ..++..+.+++.+|+..+|++|||+.++++.|++..+
T Consensus 227 ~~~~------~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 227 LPMP------PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred CCCC------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 2211 2345678999999999999999999999999988654
No 225
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.5e-39 Score=287.09 Aligned_cols=248 Identities=23% Similarity=0.342 Sum_probs=201.1
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|++.+.||.|+||.||.++.. ++..+++|.+..... ...++.+|+.++++++|+||+++++++.+....+++|||+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence 667899999999999999854 688999998875432 2356889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++.... ...+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||++........
T Consensus 82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 82 NGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred CCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 9999999884322 45688999999999999999999998 999999999999999999999999999876543331
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
......+++.|.|||.+.+. .++.++|+||||+++|+|++|..||...... . .......+....
T Consensus 157 --~~~~~~~~~~y~ape~~~~~--~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-------~-~~~~~~~~~~~~---- 220 (256)
T cd08221 157 --MAETVVGTPYYMSPELCQGV--KYNFKSDIWALGCVLYELLTLKRTFDATNPL-------N-LVVKIVQGNYTP---- 220 (256)
T ss_pred --cccccCCCccccCHhhcCCC--CCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-------H-HHHHHHcCCCCC----
Confidence 12344588999999998764 5778999999999999999999998653321 1 111222221111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
.+..++..+.+++.+||+.+|++|||++++++.
T Consensus 221 --~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 221 --VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred --CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 113446678999999999999999999999875
No 226
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.6e-39 Score=290.57 Aligned_cols=254 Identities=26% Similarity=0.389 Sum_probs=198.6
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC-----------HHHHHHHHHHhcccCCCceeeEeeEeeeCCe
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS-----------AEEFINEVSTIGRIHHVNVVQLLGFCSEGSK 134 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~-----------~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 134 (373)
|...+.||.|+||.||+|... +|+.+|+|.++..... .+.+.+|+.+++.++|||++++++++.....
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 456688999999999999865 6889999987642111 2457789999999999999999999999999
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
.++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 83 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRT----YGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred eEEEEecCCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence 9999999999999988832 35688999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcC
Q 048542 215 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKG 294 (373)
Q Consensus 215 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 294 (373)
................++..|+|||.+......++.++|+||||+++|++++|..||....... .........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~ 228 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA-------AMFKLGNKR 228 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH-------HHHHhhccc
Confidence 7654322222223345888999999987642247889999999999999999999986433211 011111111
Q ss_pred CCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 295 GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...... ......++..+.+++.+||+.+|++|||++++++
T Consensus 229 ~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 229 SAPPIP--PDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cCCcCC--ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 111111 1222345678999999999999999999999986
No 227
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.5e-39 Score=290.99 Aligned_cols=249 Identities=28% Similarity=0.421 Sum_probs=197.7
Q ss_pred hhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccC-------HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEE
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS-------AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
|++.+.||+|+||.||+|...+++.+|+|.++..... ...+.+|+.+++.++|+||+++++++.+....++++
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 4567889999999999999888899999988754321 245788999999999999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
||+++++|.+++. +...+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 82 EFVPGGSISSILN----RFGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred ecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 9999999999883 234688999999999999999999998 999999999999999999999999999875432
Q ss_pred CCC----ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 220 END----FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 220 ~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
... ........++..|+|||.+.+. .++.++|+||||+++|+|++|..||....... . .. ......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~------~-~~-~~~~~~ 224 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINES--GYGRKSDIWSIGCTVFEMATGKPPLASMDRLA------A-MF-YIGAHR 224 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCC--CCcchhhHHHHHHHHHHHHhCCCccccCChHH------H-HH-Hhhhcc
Confidence 111 1112234588999999998764 67889999999999999999999996543211 0 00 111110
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
... ...+..++..+.+++.+||+.+|.+||++.++++
T Consensus 225 ~~~----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 225 GLM----PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCC----CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000 1122335677899999999999999999999875
No 228
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.3e-39 Score=291.53 Aligned_cols=250 Identities=25% Similarity=0.343 Sum_probs=197.3
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
|++.+.||.|+||.||+|... ++..+++|.+..... ..+.+.+|+.+++.++|||++++++++..+...++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 577789999999999999876 577889998865432 346788999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|...+.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 87 ~~l~~~~~~---~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~-- 158 (282)
T cd06643 87 GAVDAVMLE---LERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ-- 158 (282)
T ss_pred CcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccccc--
Confidence 999877632 235689999999999999999999998 999999999999999999999999999875432211
Q ss_pred eeecccCCCCccccccccc---ccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 225 SISATRGTIGYIAPELISR---NFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~---~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
......++..|+|||.+.. ....++.++|+||+||++|+|++|+.||...... ..............
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~~-- 228 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSEPPTL-- 228 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH--------HHHHHHhhcCCCCC--
Confidence 1233458899999998742 1235678999999999999999999998643321 01111111111111
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..+..++..+.+++.+||+.||.+||+++++++
T Consensus 229 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 229 --AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred --CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112335668999999999999999999999875
No 229
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=4e-39 Score=287.05 Aligned_cols=240 Identities=24% Similarity=0.373 Sum_probs=188.7
Q ss_pred cccCCCCcEEEEEEEEcCCc-----------eeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEE
Q 048542 71 HKLGQGGFGSVYKGQLQTGG-----------LIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~-----------~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
+.||+|+||.||+|.+.... .+++|.+.........+.+|+.+++.++||||+++++++.. ...++||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 46899999999999876333 57888776655446788999999999999999999999887 7789999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC-------ceEEeecc
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF-------IPKVSDFG 212 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~-------~~kl~Dfg 212 (373)
||+++++|.+++... ...+++..+..++.|++.||+|||++ +++||||||+||+++.++ .+||+|||
T Consensus 80 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 80 EYVKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EcCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCC
Confidence 999999999888432 22688999999999999999999998 999999999999999887 79999999
Q ss_pred CcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcC-CCCCCCCcCccccccchHHHHHHH
Q 048542 213 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG-RRNSNMNATRSSKAYFPSWVYDQL 291 (373)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g-~~p~~~~~~~~~~~~~~~~~~~~~ 291 (373)
++...... ....++..|+|||.+.+....++.++|+||||+++|+|++| ..||....... .....
T Consensus 154 ~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~--------~~~~~ 219 (259)
T cd05037 154 IPITVLSR------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE--------KERFY 219 (259)
T ss_pred cccccccc------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh--------HHHHH
Confidence 98765431 12346778999999876434678899999999999999995 66665443211 00111
Q ss_pred hcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 292 NKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
.......... ...+.+++.+||..+|.+|||+.++++.|+
T Consensus 220 ~~~~~~~~~~--------~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 220 QDQHRLPMPD--------CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hcCCCCCCCC--------chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1111111111 157899999999999999999999999874
No 230
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.9e-39 Score=288.56 Aligned_cols=250 Identities=27% Similarity=0.397 Sum_probs=190.1
Q ss_pred cccCCCCcEEEEEEEEc----CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEee-eCCeeEEEEeccC
Q 048542 71 HKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCS-EGSKRALVYEYMP 143 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~----~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~-~~~~~~lv~e~~~ 143 (373)
+.||+|+||.||+|.+. ++..+|+|.+..... ..+.+.+|+.+++.++||||+++++++. .+...+++|||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999854 234799998854322 2467889999999999999999999775 4556889999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++... .....+..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++.........
T Consensus 81 ~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 81 HGDLRNFIRSE---THNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 99999988432 23467777888999999999999998 9999999999999999999999999998754322111
Q ss_pred e--eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCC-CCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 224 V--SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRR-NSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 224 ~--~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
. ......++..|+|||.+.+. .++.++|||||||++|+|++|.. ||...... ........+.....+
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 224 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF--------DITVYLLQGRRLLQP 224 (262)
T ss_pred eecccccCcCCccccChhHhccC--ccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHhcCCCCCCC
Confidence 1 11233466789999988664 67889999999999999999654 44432211 112222222222111
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCC
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~ 342 (373)
..++..+.+++.+||+.+|++||++.++++.|+...
T Consensus 225 ------~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 225 ------EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred ------CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 223467899999999999999999999999998754
No 231
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.6e-39 Score=290.96 Aligned_cols=252 Identities=24% Similarity=0.334 Sum_probs=201.1
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
..|++.+.||.|+||.||++... ++..+|+|.+..... ..+.+.+|+.+++.++||||+++++.+..+...++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 35788899999999999999865 688999999875433 2367889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++.. ....+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 85 ~~~~L~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (280)
T cd06611 85 DGGALDSIMLE---LERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ 158 (280)
T ss_pred CCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence 99999888743 235689999999999999999999998 999999999999999999999999998875433221
Q ss_pred ceeeecccCCCCcccccccccc---cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 223 FVSISATRGTIGYIAPELISRN---FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~---~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
......++..|+|||.+... ...++.++|+||||+++|+|++|..||....... .......+.....
T Consensus 159 --~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~ 228 (280)
T cd06611 159 --KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR--------VLLKILKSEPPTL 228 (280)
T ss_pred --ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH--------HHHHHhcCCCCCc
Confidence 12334588999999987532 1346778999999999999999999987543211 1112222211111
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..+..++..+.+++.+||+.+|++||+++++++
T Consensus 229 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 229 ----DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred ----CCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 112345667899999999999999999999976
No 232
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.3e-39 Score=290.76 Aligned_cols=263 Identities=26% Similarity=0.444 Sum_probs=204.2
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-----CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeee--CCee
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-----TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSE--GSKR 135 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-----~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~ 135 (373)
..+++.+.||+|+||.||+|.+. ++..+|+|.+...... .+.+.+|+.+++.++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35667799999999999999854 4678999999876654 5789999999999999999999999877 5678
Q ss_pred EEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcc
Q 048542 136 ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 215 (373)
+++|||+++++|.+++... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+.
T Consensus 84 ~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred EEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccc
Confidence 9999999999999988432 23589999999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCCcee-eecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccc-------ccchHHH
Q 048542 216 FHPKENDFVS-ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSK-------AYFPSWV 287 (373)
Q Consensus 216 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~-------~~~~~~~ 287 (373)
.......... .....++..|+|||.+.+. .++.++|+||||+++|+|++|..|+......... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~--~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTS--KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRL 235 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccC--CCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHH
Confidence 7653322211 1122355679999988664 6788999999999999999999987643321100 0001111
Q ss_pred HHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 288 YDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
...+........ +..++..+.+++.+||+.+|++|||+.|++++|+.+
T Consensus 236 ~~~~~~~~~~~~------~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 236 LELLKEGERLPR------PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHcCCcCCC------CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 222222221111 122346789999999999999999999999999864
No 233
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-39 Score=303.50 Aligned_cols=256 Identities=19% Similarity=0.260 Sum_probs=190.2
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
...|++.+.||+|+||.||+|... ++..||+|+..... ...|+.+++.++||||+++++++......++|||++
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~-----~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT-----TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc-----cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence 345788899999999999999876 56789999754432 356899999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
. ++|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 140 ~-~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 211 (357)
T PHA03209 140 S-SDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP- 211 (357)
T ss_pred C-CcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccCc-
Confidence 4 578777732 345689999999999999999999998 99999999999999999999999999987533221
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc---chHHHHHHHhcCC-C-c
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY---FPSWVYDQLNKGG-D-L 297 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~-~-~ 297 (373)
......||..|+|||.+.+. .++.++|||||||++|+|+++..|+........... ........+.... . .
T Consensus 212 --~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 287 (357)
T PHA03209 212 --AFLGLAGTVETNAPEVLARD--KYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPE 287 (357)
T ss_pred --ccccccccccccCCeecCCC--CCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChh
Confidence 12345689999999998764 688999999999999999987665533221110000 0001111111000 0 0
Q ss_pred ccC--ccc----------------------hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 298 ELQ--NVT----------------------EIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 298 ~~~--~~~----------------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.++ ... .....++..+.+|+.+||+.||.+|||++|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 288 EFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred hcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 000 000 000123456678999999999999999999986
No 234
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.2e-39 Score=291.09 Aligned_cols=255 Identities=26% Similarity=0.357 Sum_probs=202.4
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhccc-CCCceeeEeeEeeeCC------eeE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGS------KRA 136 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~------~~~ 136 (373)
.+|++.+.||.|++|.||+|..+ +++.+++|++.......+++.+|+.+++++ +|+||+++++++.... ..+
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLW 85 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEE
Confidence 46778899999999999999975 678999999987766667899999999999 6999999999986544 489
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
++|||+++++|.+++......+..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++..
T Consensus 86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~ 162 (275)
T cd06608 86 LVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQ 162 (275)
T ss_pred EEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCcccee
Confidence 99999999999988754443456789999999999999999999998 999999999999999999999999999875
Q ss_pred CCCCCCceeeecccCCCCcccccccccc---cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhc
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRN---FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 293 (373)
...... ......|+..|+|||.+... ...++.++||||||+++|+|++|..||....... .......
T Consensus 163 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~ 232 (275)
T cd06608 163 LDSTLG--RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR--------ALFKIPR 232 (275)
T ss_pred cccchh--hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH--------HHHHhhc
Confidence 433221 12334588899999987532 2346778999999999999999999996432211 1111111
Q ss_pred CCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 GGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...... ..+..++..+.+++.+||..||++|||++++++
T Consensus 233 ~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 233 NPPPTL----KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred cCCCCC----CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111111 112335678999999999999999999999986
No 235
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=5e-39 Score=289.05 Aligned_cols=246 Identities=24% Similarity=0.339 Sum_probs=200.3
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
+|++.+.||.|++|.||+|... +++.+|+|.+..... ....+.+|+.+++.++|+|++++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 4677899999999999999866 688999999875432 2356889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++.. ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 82 ~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 153 (274)
T cd06609 82 GGGSCLDLLKP-----GKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS 153 (274)
T ss_pred CCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccccc
Confidence 99999988832 2789999999999999999999998 999999999999999999999999999986643321
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
......++..|+|||.+.+. .++.++||||||+++|+|++|..||...... ................
T Consensus 154 --~~~~~~~~~~y~~PE~~~~~--~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--------~~~~~~~~~~~~~~~~- 220 (274)
T cd06609 154 --KRNTFVGTPFWMAPEVIKQS--GYDEKADIWSLGITAIELAKGEPPLSDLHPM--------RVLFLIPKNNPPSLEG- 220 (274)
T ss_pred --ccccccCCccccChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCcccCchH--------HHHHHhhhcCCCCCcc-
Confidence 12334588899999998765 5889999999999999999999998654321 1111222222111111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..++..+.+++.+||..+|++|||++++++
T Consensus 221 ----~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 221 ----NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ----cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 115667899999999999999999999977
No 236
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.1e-39 Score=301.21 Aligned_cols=254 Identities=19% Similarity=0.203 Sum_probs=195.7
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|++.+.||+|+||.||+++.+ +++.||+|++.... .....+.+|..++..++|+||+.+++++.+++..|+|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 4677899999999999999866 67889999987532 123457789999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++|+|.+++... ...+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 82 y~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 82 YYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred CCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 99999999988432 34688999999999999999999998 9999999999999999999999999998765433
Q ss_pred CCceeeecccCCCCcccccccccc---cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCc
Q 048542 221 NDFVSISATRGTIGYIAPELISRN---FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 297 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (373)
... ......||+.|+|||.+.+. .+.++.++|||||||++|+|++|+.||....... ............
T Consensus 156 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-------~~~~i~~~~~~~ 227 (331)
T cd05624 156 GTV-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE-------TYGKIMNHEERF 227 (331)
T ss_pred Cce-eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH-------HHHHHHcCCCcc
Confidence 221 12335699999999988642 1356789999999999999999999997543211 111111111111
Q ss_pred ccCccchhhHHHHHHHHHHHHhhcCCCCCC--CCCHHHHHH
Q 048542 298 ELQNVTEIESMIARKLCMIGLWCIQVKAAD--RPSMTKVLE 336 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~ell~ 336 (373)
.++. ....++..+.+++.+|+..++++ |++++++++
T Consensus 228 ~~p~---~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 228 QFPS---HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred cCCC---ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 1111 11234678899999999876544 467888765
No 237
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.9e-39 Score=290.28 Aligned_cols=246 Identities=23% Similarity=0.344 Sum_probs=198.5
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
..|...+.||+|+||.||+|.+. ++..||+|.+..... ..+.+.+|+.+++.++||||+++++++..+...++||||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 45667788999999999999865 678899999875432 235788999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++++|.+++. ...+++..+..++.|+++|+.|||++ +++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 84 LGGGSALDLLK-----PGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred cCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 99999988873 24688999999999999999999998 99999999999999999999999999987654322
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
. ......++..|+|||.+.+. .++.++|+|||||++|+|++|..|+....... ...........
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------~~~~~~~~~~~---- 219 (277)
T cd06642 156 I--KRNTFVGTPFWMAPEVIKQS--AYDFKADIWSLGITAIELAKGEPPNSDLHPMR--------VLFLIPKNSPP---- 219 (277)
T ss_pred h--hhhcccCcccccCHHHhCcC--CCchhhhHHHHHHHHHHHHhCCCCCcccchhh--------HHhhhhcCCCC----
Confidence 1 11233578899999998764 67889999999999999999999986433211 11111111111
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.....++..+.+++.+||+.+|++|||+.++++
T Consensus 220 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 220 --TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred --CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 112234567899999999999999999999997
No 238
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.3e-39 Score=292.98 Aligned_cols=261 Identities=22% Similarity=0.301 Sum_probs=197.8
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
.|++.+.||+|+||.||+|..+ +++.||+|.+..... ..+.+.+|+.+++.++|+|++++++++......+++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 4667789999999999999976 688999998865432 235678999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++++|..... ....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~----~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 82 CDHTVLNELEK----NPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred cCccHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 99988876652 234589999999999999999999998 99999999999999999999999999998664432
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchH-------HHHHHHhc-
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPS-------WVYDQLNK- 293 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~-------~~~~~~~~- 293 (373)
. ......++..|+|||.+.+. ..++.++|+||||+++|+|++|..||......+....... ........
T Consensus 155 ~--~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07847 155 D--DYTDYVATRWYRAPELLVGD-TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTN 231 (286)
T ss_pred c--cccCcccccccCCHHHHhCC-CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccc
Confidence 1 12233578899999988653 3578899999999999999999999975443211000000 00000000
Q ss_pred ----C-CCcccCcc---chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 ----G-GDLELQNV---TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 ----~-~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
. ........ ......++..+.+|+.+||+.+|++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0 00000000 1111234678999999999999999999999875
No 239
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5.6e-39 Score=286.58 Aligned_cols=253 Identities=24% Similarity=0.293 Sum_probs=200.4
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
.|++.+.||.|+||.||+|... +++.+++|.+..... ..+.+.+|+.+++.++||||+++++++.+....+++|||++
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~ 83 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG 83 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC
Confidence 4677789999999999999865 678899999876533 34678899999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++.. ....+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 84 ~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 156 (262)
T cd06613 84 GGSLQDIYQV---TRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA- 156 (262)
T ss_pred CCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhhh-
Confidence 9999888732 225689999999999999999999998 999999999999999999999999999876543211
Q ss_pred eeeecccCCCCcccccccccc-cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 224 VSISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~-~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
......++..|+|||.+.+. .+.++.++|+||||+++|+|++|..||........ ............ .
T Consensus 157 -~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-------~~~~~~~~~~~~---~ 225 (262)
T cd06613 157 -KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-------LFLISKSNFPPP---K 225 (262)
T ss_pred -ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhccCCCc---c
Confidence 12234578899999988642 12567899999999999999999999875432110 111111100100 1
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
......++..+.+++.+||+.+|.+|||+++++.
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 226 LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1122345678999999999999999999999975
No 240
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=5.4e-39 Score=285.97 Aligned_cols=247 Identities=25% Similarity=0.352 Sum_probs=197.7
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeee-CCeeEEEEec
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSE-GSKRALVYEY 141 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-~~~~~lv~e~ 141 (373)
|++.+.||+|++|.||++..+ +++.+|+|.+..... ..+.+.+|+.+++.++|+|++++++.+.. +...+++|||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 678899999999999999865 578899999875433 23567889999999999999999988764 4568999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++++|.+++... ....+++..+..++.+++.|+++||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 82 CEGGDLYHKLKEQ--KGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred cCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 9999998888432 245689999999999999999999998 99999999999999999999999999987654322
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
. ......+++.|+|||.+.+. .++.++|+||+|+++++|++|..||...... .... ....+...
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-------~~~~-~~~~~~~~---- 220 (257)
T cd08223 157 D--MASTLIGTPYYMSPELFSNK--PYNYKSDVWALGCCVYEMATLKHAFNAKDMN-------SLVY-RIIEGKLP---- 220 (257)
T ss_pred C--ccccccCCcCccChhHhcCC--CCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-------HHHH-HHHhcCCC----
Confidence 1 12334588999999998764 6788999999999999999999998643311 1111 12222111
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..+..++..+.+++.+||+.+|++|||+.++++
T Consensus 221 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 221 --PMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred --CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 122345678999999999999999999999986
No 241
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.5e-39 Score=294.38 Aligned_cols=256 Identities=26% Similarity=0.420 Sum_probs=198.7
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCc----eeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGG----LIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAL 137 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 137 (373)
..++..+.||+|+||.||+|.+. ++. .+|+|.+...... ..++.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 34556688999999999999864 444 4788988754332 24678999999999999999999998654 4679
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
++||+++|+|.+++... ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++...
T Consensus 86 v~e~~~~g~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 86 VTQLMPHGCLLDYVHEH---KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eehhcCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccc
Confidence 99999999999887432 34588999999999999999999998 9999999999999999999999999999865
Q ss_pred CCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCC
Q 048542 218 PKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGD 296 (373)
Q Consensus 218 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
.............++..|+|||.+.+. .++.++||||||+++|+|++ |..||...... .....+..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~ 229 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYR--KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--------EIPDLLEKGER 229 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccC--CCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHCCCC
Confidence 433322222234456789999998764 67889999999999999997 88888643211 12222333322
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
.... ...+..+.+++.+||..+|++||+++++++.|+.+..
T Consensus 230 ~~~~------~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 230 LPQP------PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred CCCC------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 2211 1234578999999999999999999999999997643
No 242
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4e-39 Score=293.01 Aligned_cols=247 Identities=26% Similarity=0.358 Sum_probs=199.0
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
+|++.+.||.|++|.||+|... +++.|++|.+..... ..+.+.+|+..++.++|||++++++++..+...++|+||++
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 99 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLA 99 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecC
Confidence 4567789999999999999854 788999998875433 34678899999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++. ...+++..+..++.+++.|++|||+. +++|+||||+||+++.++.++|+|||++.........
T Consensus 100 ~~~L~~~~~-----~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 171 (296)
T cd06655 100 GGSLTDVVT-----ETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK 171 (296)
T ss_pred CCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccccccc
Confidence 999998773 23588999999999999999999998 9999999999999999999999999998754332211
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
.....++..|+|||.+.+. .++.++|+|||||++|+|++|+.||....... .. ............
T Consensus 172 --~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~-------~~-~~~~~~~~~~~~--- 236 (296)
T cd06655 172 --RSTMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------AL-YLIATNGTPELQ--- 236 (296)
T ss_pred --CCCcCCCccccCcchhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HH-HHHHhcCCcccC---
Confidence 1234588899999998764 67889999999999999999999997544311 01 111111111111
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.+..++..+.+++.+||+.||.+|||+.++++
T Consensus 237 -~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 237 -NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -CcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 12234567899999999999999999999975
No 243
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5e-39 Score=286.01 Aligned_cols=249 Identities=32% Similarity=0.528 Sum_probs=199.3
Q ss_pred hhhcccCCCCcEEEEEEEEcC-----CceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 68 HFTHKLGQGGFGSVYKGQLQT-----GGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~~~-----~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.+.+.||.|+||.||++.+.. +..+|+|.+..... ....+.+|+..++.++|+||+++++++.+.+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 356889999999999998763 37899999976654 35788999999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++++|.+++.... ...+++..+..++.|++.|+++||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 82 YMEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred ccCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 999999998884322 12289999999999999999999998 9999999999999999999999999999866543
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
..... ....+++.|+|||.+.+ ..++.++|+||+|+++++|++ |..||..... .........+.....
T Consensus 157 ~~~~~-~~~~~~~~y~~Pe~~~~--~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~ 225 (258)
T smart00219 157 DYYKK-KGGKLPIRWMAPESLKD--GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--------EEVLEYLKKGYRLPK 225 (258)
T ss_pred ccccc-ccCCCcccccChHHhcc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhcCCCCCC
Confidence 22211 12337789999998854 477889999999999999998 6777754221 112223333332222
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEML 338 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L 338 (373)
. ...+..+.+++.+||+.||++|||+.++++.|
T Consensus 226 ~------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 226 P------ENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred C------CcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 1 22567899999999999999999999999864
No 244
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=4.3e-39 Score=288.69 Aligned_cols=252 Identities=25% Similarity=0.409 Sum_probs=199.2
Q ss_pred hhhhcccCCCCcEEEEEEEEcC--CceeEEEEeccCc-----------cCHHHHHHHHHHhcc-cCCCceeeEeeEeeeC
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQT--GGLIAVKMLENSK-----------FSAEEFINEVSTIGR-IHHVNVVQLLGFCSEG 132 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~~--~~~vaiK~~~~~~-----------~~~~~~~~e~~~l~~-l~h~ni~~~~~~~~~~ 132 (373)
|++.+.||+|+||.||+|..+. ++.+|+|.+.... ....++.+|+.++.+ ++||||+++++++..+
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 5677899999999999999764 6789999875321 122456778887765 7999999999999999
Q ss_pred CeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEecCcCCCCeeeeCCCceEEeec
Q 048542 133 SKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN-GCDVCILHFDIKPHNILLDHNFIPKVSDF 211 (373)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~-~~~~~ivH~dikp~Nil~~~~~~~kl~Df 211 (373)
...+++|||+++++|.+++.........+++..++.++.|++.||.|||+ . +++|+||+|+||+++.++.++|+||
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999988874433345678999999999999999999996 4 8999999999999999999999999
Q ss_pred cCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHH
Q 048542 212 GLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQL 291 (373)
Q Consensus 212 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~ 291 (373)
|.+....... ......|+..|+|||.+.+. .++.++|+||||+++|+|++|+.||...... . .....
T Consensus 159 g~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~--~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-------~-~~~~~ 225 (269)
T cd08528 159 GLAKQKQPES---KLTSVVGTILYSCPEIVKNE--PYGEKADVWAFGCILYQMCTLQPPFYSTNML-------S-LATKI 225 (269)
T ss_pred cceeeccccc---ccccccCcccCcChhhhcCC--CCchHHHHHHHHHHHHHHHhCCCcccccCHH-------H-HHHHH
Confidence 9998654332 22345688999999998764 6788999999999999999999998643321 1 11111
Q ss_pred hcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 292 NKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
......... ...++..+.+++.+||+.||++||++.|+..+++
T Consensus 226 ~~~~~~~~~-----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 226 VEAVYEPLP-----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred hhccCCcCC-----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 111111111 1134567899999999999999999999999886
No 245
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4e-40 Score=293.68 Aligned_cols=240 Identities=23% Similarity=0.320 Sum_probs=186.7
Q ss_pred cccCCCCcEEEEEEEEc-C-------CceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 71 HKLGQGGFGSVYKGQLQ-T-------GGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~-------~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
+.||+|+||.||+|... . ...+++|.+...... .+.+.+|..+++.++|||++++++++..+...++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 36899999999999764 2 234888887654332 36788899999999999999999999998999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCc--------eEEeeccC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFI--------PKVSDFGL 213 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~--------~kl~Dfg~ 213 (373)
+++|+|.+++... +..+++..+..++.|++.||+|||+. +++||||||+||+++.++. ++++|||.
T Consensus 81 ~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 81 VKFGSLDTYLKKN---KNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred CCCCcHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccccc
Confidence 9999999988432 33688999999999999999999998 9999999999999987664 69999998
Q ss_pred cccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCC-CCCCCcCccccccchHHHHHHHh
Q 048542 214 AKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRR-NSNMNATRSSKAYFPSWVYDQLN 292 (373)
Q Consensus 214 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~-p~~~~~~~~~~~~~~~~~~~~~~ 292 (373)
+...... ....++..|+|||.+.+. ..++.++||||||+++|+|++|.. |+....... ......
T Consensus 155 ~~~~~~~------~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--------~~~~~~ 219 (258)
T cd05078 155 SITVLPK------EILLERIPWVPPECIENP-QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--------KLQFYE 219 (258)
T ss_pred ccccCCc------hhccccCCccCchhccCC-CCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--------HHHHHH
Confidence 8654322 223578899999998753 357889999999999999999964 443222110 111111
Q ss_pred cCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 293 KGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
.. .. .+...+.++.+++.+||+.||++|||++++++.|+
T Consensus 220 ~~--~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 220 DR--HQ------LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred cc--cc------CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11 11 11223457899999999999999999999999874
No 246
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.8e-39 Score=288.63 Aligned_cols=247 Identities=26% Similarity=0.402 Sum_probs=196.5
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC----------HHHHHHHHHHhcccCCCceeeEeeEeeeCCee
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS----------AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKR 135 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----------~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 135 (373)
+.+...||+|++|.||+|... +++.+|+|.+...... .+.+.+|+.+++.++||||+++++++.+....
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 456688999999999999865 6789999988654322 14578899999999999999999999999999
Q ss_pred EEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcc
Q 048542 136 ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 215 (373)
+++|||+++++|.+++. ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+.
T Consensus 82 ~lv~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 82 NIFLEYVPGGSVAALLN----NYGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred EEEEEecCCCCHHHHHH----hccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 99999999999998883 335688889999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCc----eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHH
Q 048542 216 FHPKENDF----VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQL 291 (373)
Q Consensus 216 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~ 291 (373)
........ .......|+..|+|||.+.+. .++.++|+||+||++|+|++|..||....... ... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------~~~-~~ 224 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT--SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-------AIF-KI 224 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccC--CCCchhhhHHHHHHHHHHhhCCCCCCCccHHH-------HHH-HH
Confidence 65422111 011123578899999998764 67889999999999999999999997543211 011 11
Q ss_pred hcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 292 NKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...... ..+..++..+.+++.+||+.||.+||++.++++
T Consensus 225 ~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 225 GENASP------EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred hccCCC------cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 111111 122345678899999999999999999999986
No 247
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.4e-38 Score=286.69 Aligned_cols=246 Identities=22% Similarity=0.339 Sum_probs=199.6
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
.|+..+.||.|+||.||+|.+. ++..+|+|.+..... ....+.+|+.+++.++||||+++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4566788999999999999875 688999999875432 2367889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++. ..++++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~~L~~~i~-----~~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 85 GGGSALDLLR-----AGPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 9999998873 24588889999999999999999998 999999999999999999999999999876543221
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
......++..|+|||.+.+. .++.++|+||||+++|+|++|..||....... ..........
T Consensus 157 --~~~~~~~~~~y~apE~~~~~--~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------~~~~~~~~~~------ 218 (277)
T cd06640 157 --KRNTFVGTPFWMAPEVIQQS--AYDSKADIWSLGITAIELAKGEPPNSDMHPMR--------VLFLIPKNNP------ 218 (277)
T ss_pred --ccccccCcccccCHhHhccC--CCccHHHHHHHHHHHHHHHHCCCCCCCcChHh--------HhhhhhcCCC------
Confidence 12234578889999998654 67889999999999999999999987543211 1111111111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
......++..+.+++.+||+.+|++||+++++++.
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 219 PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 12334567789999999999999999999999764
No 248
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7.9e-39 Score=293.90 Aligned_cols=260 Identities=20% Similarity=0.279 Sum_probs=186.8
Q ss_pred cccCCCCcEEEEEEEEc---CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEee--eCCeeEEEEeccCcC
Q 048542 71 HKLGQGGFGSVYKGQLQ---TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCS--EGSKRALVYEYMPNG 145 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~---~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~--~~~~~~lv~e~~~~g 145 (373)
.+||+|+||.||+|..+ ++..||+|.+..... ...+.+|+.+++.++||||+++++++. .+...+++|||+++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~- 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH- 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-
Confidence 67999999999999865 456899998875443 346778999999999999999999884 35678999999864
Q ss_pred CccccccCC-----CCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeee----eCCCceEEeeccCccc
Q 048542 146 SLDRHVFPK-----ESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILL----DHNFIPKVSDFGLAKF 216 (373)
Q Consensus 146 sL~~~l~~~-----~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~----~~~~~~kl~Dfg~~~~ 216 (373)
+|.+++... ......+++..+..++.|++.||.|||+. +++||||||+||++ +.++.+||+|||++..
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 666655321 11234588999999999999999999998 99999999999999 4567899999999986
Q ss_pred CCCCCCc-eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccc--ccchHHHHHHHhc
Q 048542 217 HPKENDF-VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSK--AYFPSWVYDQLNK 293 (373)
Q Consensus 217 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~--~~~~~~~~~~~~~ 293 (373)
....... .......||..|+|||.+.+. ..++.++|||||||++|+|++|..||......... .............
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 240 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSV 240 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCC-CccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHh
Confidence 5433211 122344688999999998653 35788999999999999999999999754422110 0000000000000
Q ss_pred CC------------------------CcccCcc------chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 GG------------------------DLELQNV------TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 ~~------------------------~~~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.. ....... .......+..+.+|+.+||+.||.+|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 241 MGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred cCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 00 0000000 0000112346889999999999999999999985
No 249
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=304.39 Aligned_cols=240 Identities=26% Similarity=0.367 Sum_probs=198.2
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCccCH----HHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~----~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
+.||.|+||.||.|++. +.+.||||.+..+.... .+++.|+..|+.++|||++.+.|+|..+...|+|||||- |
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl-G 110 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL-G 110 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-c
Confidence 67999999999999855 78899999987654332 578899999999999999999999999999999999994 4
Q ss_pred CccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCcee
Q 048542 146 SLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 225 (373)
Q Consensus 146 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 225 (373)
|-.|++. ...+++.+.++..|..+.+.||+|||+. +.+|||||..|||+++.|.+||+|||.+......+
T Consensus 111 SAsDlle---VhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn---- 180 (948)
T KOG0577|consen 111 SASDLLE---VHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN---- 180 (948)
T ss_pred cHHHHHH---HHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCchh----
Confidence 7777763 3357899999999999999999999998 99999999999999999999999999998765543
Q ss_pred eecccCCCCcccccccccc-cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 226 ISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 226 ~~~~~gt~~y~aPE~~~~~-~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
..+|||.|||||++.-. -|.|+-|+||||||+...||.-.++|...+..- ...+....+. .+.+.
T Consensus 181 --sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM-------SALYHIAQNe-sPtLq---- 246 (948)
T KOG0577|consen 181 --SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQNE-SPTLQ---- 246 (948)
T ss_pred --cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH-------HHHHHHHhcC-CCCCC----
Confidence 45699999999987432 368999999999999999999999998765431 1222222221 11111
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..+.+..++.++..||+.-|.+|||.+++++
T Consensus 247 -s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 247 -SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred -CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 2456888999999999999999999988764
No 250
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=4.9e-39 Score=287.14 Aligned_cols=249 Identities=22% Similarity=0.348 Sum_probs=201.5
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeee--CCeeEEEEe
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSE--GSKRALVYE 140 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~~lv~e 140 (373)
|++.+.||.|+||.||++... ++..+|+|.+...... .+++.+|+.+++.++|+||+++++++.. +...+++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 567789999999999999865 7789999998754432 3567889999999999999999997753 456899999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-----cCCCCCeEecCcCCCCeeeeCCCceEEeeccCcc
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLH-----NGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH-----~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 215 (373)
|+++++|.+++........++++..++.++.|++.||.||| +. +++|+||+|+||+++.++.+||+|||++.
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~~ 158 (265)
T cd08217 82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLAK 158 (265)
T ss_pred hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEecccccc
Confidence 99999999888654444677999999999999999999999 66 99999999999999999999999999998
Q ss_pred cCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 216 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 216 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
........ .....++..|+|||.+.+. .++.++|+||||+++|+|++|..||...... ........+.
T Consensus 159 ~~~~~~~~--~~~~~~~~~~~~pE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~ 226 (265)
T cd08217 159 ILGHDSSF--AKTYVGTPYYMSPEQLNHM--SYDEKSDIWSLGCLIYELCALSPPFTARNQL--------QLASKIKEGK 226 (265)
T ss_pred cccCCccc--ccccccCCCccChhhhcCC--CCCchhHHHHHHHHHHHHHHCCCcccCcCHH--------HHHHHHhcCC
Confidence 66543321 2234588999999998764 6788999999999999999999998754321 1222222222
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.. ..+..++..+.+++.+||+.+|++|||++++++
T Consensus 227 ~~------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 227 FR------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred CC------CCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 11 223345678999999999999999999999987
No 251
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=308.36 Aligned_cols=245 Identities=27% Similarity=0.387 Sum_probs=204.8
Q ss_pred ccCCCCcEEEEEEEEc-CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCccc
Q 048542 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDR 149 (373)
Q Consensus 72 ~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~~ 149 (373)
.||+|.||+||-|++. +...+|||.+..... ...-+.+|+.+.+.|+|.|||+++|.+.++++.-+.||-.+||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 5999999999999966 566899998875443 33567899999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeee-CCCceEEeeccCcccCCCCCCceee
Q 048542 150 HVFPKESRGQSL--CWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD-HNFIPKVSDFGLAKFHPKENDFVSI 226 (373)
Q Consensus 150 ~l~~~~~~~~~l--~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~-~~~~~kl~Dfg~~~~~~~~~~~~~~ 226 (373)
++... =+++ ++...--+.+||++||.|||++ .|||||||-+|+|++ -.|.+||+|||-++++..-+. ..
T Consensus 662 LLrsk---WGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP--~T 733 (1226)
T KOG4279|consen 662 LLRSK---WGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP--CT 733 (1226)
T ss_pred HHHhc---cCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCc--cc
Confidence 99533 3445 7788888999999999999998 999999999999997 578999999999987654432 34
Q ss_pred ecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhh
Q 048542 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIE 306 (373)
Q Consensus 227 ~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (373)
....||..|||||++......|+.++|||||||.+.||.||++||...+...- ...+.|.. ..-+++|
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA---------AMFkVGmy---KvHP~iP 801 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA---------AMFKVGMY---KVHPPIP 801 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH---------hhhhhcce---ecCCCCc
Confidence 56679999999999987767899999999999999999999999976554321 11222211 1124667
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 307 SMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 307 ~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..++.+++.++.+|+.+||.+||+++++++
T Consensus 802 eelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 888999999999999999999999999986
No 252
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.7e-39 Score=293.57 Aligned_cols=260 Identities=20% Similarity=0.258 Sum_probs=195.0
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|++.+.||+|+||.||+|..+ +|..+|+|.++.... ....+.+|+.+++.++||||+++++++.+....++++||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 567789999999999999876 788999999875422 2256778999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
+ ++|.+++.. .+..+++..+..++.|+++||.|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 82 ~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 82 D-QDLKKYFDS---CNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred C-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 6 477766632 235689999999999999999999998 999999999999999999999999999875533221
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc--------chHHHHHHHhcC
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY--------FPSWVYDQLNKG 294 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~--------~~~~~~~~~~~~ 294 (373)
......++..|+|||.+.+. ..++.++|||||||++|+|++|..|+........... .+...+......
T Consensus 155 --~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07839 155 --CYSAEVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKL 231 (284)
T ss_pred --CcCCCccccCCcChHHHhCC-cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhc
Confidence 12234578899999988653 3468899999999999999999998654332110000 000000000000
Q ss_pred -C---CcccCcc---chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 295 -G---DLELQNV---TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 295 -~---~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
. ....... .+....++..+.+++.+||+.||.+|||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0 0000000 1122345678899999999999999999999976
No 253
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.5e-39 Score=292.83 Aligned_cols=248 Identities=25% Similarity=0.355 Sum_probs=199.8
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
..|.+.+.||.|+||.||+|... +++.||+|.+...... .+.+.+|+.+++.++|+||+++++++..+...++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 56778899999999999999864 7899999998764433 366788999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~-----~~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 99 AGGSLTDVVT-----ETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred CCCCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 9999998873 24578889999999999999999998 999999999999999999999999999875433221
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
. .....+++.|+|||.+.+. .++.++|+|||||++|+|++|..||......... .. .........
T Consensus 171 ~--~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~-------~~-~~~~~~~~~--- 235 (297)
T cd06656 171 K--RSTMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-------YL-IATNGTPEL--- 235 (297)
T ss_pred C--cCcccCCccccCHHHHcCC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe-------ee-eccCCCCCC---
Confidence 1 1234588899999998764 6788999999999999999999999654322110 00 001111111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..+..++..+.+++.+||+.+|++||+++++++
T Consensus 236 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 236 -QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred -CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112334567899999999999999999999988
No 254
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1e-39 Score=295.34 Aligned_cols=261 Identities=22% Similarity=0.321 Sum_probs=197.6
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
+|++.+.||+|+||.||+|..+ +++.+|+|.+..... ..+.+.+|+++++.++||||+++++++..+...++|+||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 4667799999999999999976 688999998765432 235678999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++++|..+.. ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 82 VDHTVLDDLEK----YPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred CCccHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 99988877652 234589999999999999999999998 99999999999999999999999999987654332
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc-------chHHHHHHHh--
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY-------FPSWVYDQLN-- 292 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~-------~~~~~~~~~~-- 292 (373)
. ......++..|+|||.+.+. ..++.++||||||+++|+|++|+.||........... +.........
T Consensus 155 ~--~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 155 E--VYTDYVATRWYRAPELLVGD-TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred c--ccCcccceeeccCcHHhccc-cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccc
Confidence 1 22334578899999988653 3567889999999999999999988864432110000 0000000000
Q ss_pred ----cCCCcccCc---cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 293 ----KGGDLELQN---VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 293 ----~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
......... .......++..+.+++.+||+.+|++||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000000 01112245678999999999999999999999886
No 255
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.1e-39 Score=294.01 Aligned_cols=260 Identities=23% Similarity=0.316 Sum_probs=196.7
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC------HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEE
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS------AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~------~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
|++.+.||+|++|.||+|... +++.||+|.+...... ...+.+|+.+++.++|+||+++++++.+....++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 566788999999999999865 6889999999765433 245678999999999999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
||+ +++|.+++... ...+++..+..++.|+++||.|||++ +++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~-~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 82 EFM-ETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred ccc-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 999 88999888432 23689999999999999999999998 999999999999999999999999999986644
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccch-------HHHHHHHh
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFP-------SWVYDQLN 292 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~-------~~~~~~~~ 292 (373)
... ......++..|+|||.+.+. ..++.++|+|||||++|+|++|..||............. ...+....
T Consensus 155 ~~~--~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (298)
T cd07841 155 PNR--KMTHQVVTRWYRAPELLFGA-RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVT 231 (298)
T ss_pred CCc--cccccccceeeeCHHHHhCC-CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcc
Confidence 321 12233467889999988543 356889999999999999999977775433211000000 00000000
Q ss_pred ---cCCC---cccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 293 ---KGGD---LELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 293 ---~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.... .............+..+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 232 SLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 0000 0000011122334678999999999999999999999998
No 256
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.4e-39 Score=303.87 Aligned_cols=201 Identities=26% Similarity=0.354 Sum_probs=172.3
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEEE-cCCceeEEEEeccCccCHHHHHHHHHHhcccC-C-----CceeeEeeEeeeCCe
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVKMLENSKFSAEEFINEVSTIGRIH-H-----VNVVQLLGFCSEGSK 134 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-h-----~ni~~~~~~~~~~~~ 134 (373)
.+.-+|.+.+.||+|+||.|.+|.+ ++++.||||+++....-..+...|+.+|..|+ | -|+|+++++|...++
T Consensus 183 ~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 183 HIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred eeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 3444778889999999999999985 48999999999987776678889999999996 3 389999999999999
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC--CCceEEeecc
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH--NFIPKVSDFG 212 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~--~~~~kl~Dfg 212 (373)
.|||+|.+ +.+|++++..+. -..++...++.++.||+.||.+||+. +|||+||||+|||+.+ ...+||+|||
T Consensus 263 lciVfELL-~~NLYellK~n~--f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFG 336 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNK--FRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFG 336 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecc
Confidence 99999999 569999996544 34588999999999999999999988 9999999999999964 3479999999
Q ss_pred CcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCc
Q 048542 213 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNA 275 (373)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~ 275 (373)
+++.....- + ....+-.|.|||++.|. .|+.+.|+||||||+.||++|.+.|.+..
T Consensus 337 SSc~~~q~v----y-tYiQSRfYRAPEVILGl--pY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 337 SSCFESQRV----Y-TYIQSRFYRAPEVILGL--PYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred cccccCCcc----e-eeeeccccccchhhccC--CCCCccceeehhhhHHhHhcCccccCCCC
Confidence 998764432 1 33466789999999986 89999999999999999999987776544
No 257
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.6e-39 Score=288.03 Aligned_cols=256 Identities=27% Similarity=0.404 Sum_probs=195.8
Q ss_pred hhhhcccCCCCcEEEEEEEEc----CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeCC------
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEGS------ 133 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~----~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~------ 133 (373)
|.+.+.||+|+||.||+|... ++..+|||++...... .+++.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 356688999999999999753 4678999998764332 356889999999999999999999885432
Q ss_pred eeEEEEeccCcCCccccccCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeec
Q 048542 134 KRALVYEYMPNGSLDRHVFPKE--SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211 (373)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Df 211 (373)
..++++||+.+|+|.+++.... .....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2478899999999987764322 1223578899999999999999999998 9999999999999999999999999
Q ss_pred cCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHH
Q 048542 212 GLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQ 290 (373)
Q Consensus 212 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~ 290 (373)
|++................++..|++||.+.+. .++.++|||||||++|+|++ |..||...... .....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--------~~~~~ 227 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADN--VYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--------EIYNY 227 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcC--ccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--------HHHHH
Confidence 998865433222112223456789999988654 67889999999999999999 77877543221 11222
Q ss_pred HhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 291 LNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
.......... ...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 228 ~~~~~~~~~~------~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 228 LIKGNRLKQP------PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHcCCcCCCC------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2222211111 22356899999999999999999999999999864
No 258
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.4e-39 Score=311.29 Aligned_cols=257 Identities=17% Similarity=0.273 Sum_probs=186.5
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccC------CCceeeEeeEeeeC-CeeE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIH------HVNVVQLLGFCSEG-SKRA 136 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~~~-~~~~ 136 (373)
..|++.++||+|+||+||+|... +++.||||+++.......+...|+.+++.++ |.+++.+++++..+ .+.+
T Consensus 129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~ 208 (467)
T PTZ00284 129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMC 208 (467)
T ss_pred CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEE
Confidence 46778899999999999999865 6788999999754433445566777776664 44688898888654 5788
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEecCcCCCCeeeeCCC-----------
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN-GCDVCILHFDIKPHNILLDHNF----------- 204 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~-~~~~~ivH~dikp~Nil~~~~~----------- 204 (373)
+|||++ +++|.+++. +...+++..+..++.|++.||.|||+ . +|+||||||+|||++.++
T Consensus 209 iv~~~~-g~~l~~~l~----~~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~~~~~~~ 280 (467)
T PTZ00284 209 IVMPKY-GPCLLDWIM----KHGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDPVTNRAL 280 (467)
T ss_pred EEEecc-CCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccccccccccc
Confidence 999998 678877773 23568999999999999999999996 5 999999999999998665
Q ss_pred -----ceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccc
Q 048542 205 -----IPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSS 279 (373)
Q Consensus 205 -----~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~ 279 (373)
.+||+|||.+...... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||........
T Consensus 281 ~~~~~~vkl~DfG~~~~~~~~-----~~~~~gt~~Y~APE~~~~~--~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~ 353 (467)
T PTZ00284 281 PPDPCRVRICDLGGCCDERHS-----RTAIVSTRHYRSPEVVLGL--GWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEH 353 (467)
T ss_pred CCCCceEEECCCCccccCccc-----cccccCCccccCcHHhhcC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 4999999987643221 2345699999999999775 788899999999999999999999975442110
Q ss_pred ccc-------ch-HHHH--------HHHhcCCCcccC-cc---------chh-hHHHHHHHHHHHHhhcCCCCCCCCCHH
Q 048542 280 KAY-------FP-SWVY--------DQLNKGGDLELQ-NV---------TEI-ESMIARKLCMIGLWCIQVKAADRPSMT 332 (373)
Q Consensus 280 ~~~-------~~-~~~~--------~~~~~~~~~~~~-~~---------~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~ 332 (373)
... ++ .|.. ............ .. ... .......+.+|+.+||+.||.+|||++
T Consensus 354 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~ 433 (467)
T PTZ00284 354 LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNAR 433 (467)
T ss_pred HHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHH
Confidence 000 00 0100 000000000000 00 000 001134678999999999999999999
Q ss_pred HHHH
Q 048542 333 KVLE 336 (373)
Q Consensus 333 ell~ 336 (373)
|+++
T Consensus 434 e~L~ 437 (467)
T PTZ00284 434 QMTT 437 (467)
T ss_pred HHhc
Confidence 9987
No 259
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.6e-39 Score=299.02 Aligned_cols=255 Identities=19% Similarity=0.201 Sum_probs=195.8
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|++.+.||+|+||.||++..+ +++.+|+|++.... .....+.+|..++..++|+||+++++.+.+....++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 4667899999999999999876 57789999986422 222457789999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++|+|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 82 y~~~g~L~~~l~~---~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 82 YYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred ccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 9999999999843 234688999999999999999999998 9999999999999999999999999998754332
Q ss_pred CCceeeecccCCCCcccccccccc---cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCc
Q 048542 221 NDFVSISATRGTIGYIAPELISRN---FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 297 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (373)
.. .......||+.|+|||++.+. .+.++.++|||||||++|+|++|+.||....... ............
T Consensus 156 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~-------~~~~i~~~~~~~ 227 (332)
T cd05623 156 GT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE-------TYGKIMNHKERF 227 (332)
T ss_pred Cc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH-------HHHHHhCCCccc
Confidence 22 122335699999999988631 2357889999999999999999999997543211 111111111111
Q ss_pred ccCccchhhHHHHHHHHHHHHhhcCCCCCC--CCCHHHHHHH
Q 048542 298 ELQNVTEIESMIARKLCMIGLWCIQVKAAD--RPSMTKVLEM 337 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~ell~~ 337 (373)
..+. ....++..+.+|+.+|+..++.+ |++++++++.
T Consensus 228 ~~p~---~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 228 QFPA---QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred cCCC---ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 1111 11234677899999988654444 6889988765
No 260
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=7.6e-39 Score=284.69 Aligned_cols=247 Identities=29% Similarity=0.466 Sum_probs=197.8
Q ss_pred HHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
..|++.+.||+|+||.||++.. ++..+|+|.++... ..+.+.+|+.+++.++|||++++++++..+ ..+++|||+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~ 82 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSK 82 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCC
Confidence 4577889999999999999875 57889999886533 446788999999999999999999998654 47999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|.+++.... ...+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~--- 154 (254)
T cd05083 83 GNLVNFLRTRG--RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV--- 154 (254)
T ss_pred CCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC---
Confidence 99999885332 34588999999999999999999998 99999999999999999999999999987543221
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
.....+..|+|||.+.+. .++.++|+||||+++|+|++ |+.||....... .......+......
T Consensus 155 --~~~~~~~~y~~pe~~~~~--~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~--- 219 (254)
T cd05083 155 --DNSKLPVKWTAPEALKHK--KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE--------VKECVEKGYRMEPP--- 219 (254)
T ss_pred --CCCCCCceecCHHHhccC--CcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH--------HHHHHhCCCCCCCC---
Confidence 123345679999988653 78889999999999999997 888886543211 22223333222211
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
..++..+.+++.+||+.+|++||+++++++.|+.
T Consensus 220 ---~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 220 ---EGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ---CcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 2345678999999999999999999999999874
No 261
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.2e-38 Score=289.18 Aligned_cols=254 Identities=26% Similarity=0.327 Sum_probs=198.7
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhccc-CCCceeeEeeEeeeC-----CeeEEE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLGFCSEG-----SKRALV 138 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~-----~~~~lv 138 (373)
.|.+.+.||+|+||.||++..+ +++.+|+|.+.........+.+|+.+++++ +|||++++++++... ...++|
T Consensus 23 ~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv 102 (291)
T cd06639 23 TWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLV 102 (291)
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEE
Confidence 4667789999999999999865 688999999876655567788899999998 799999999998653 358999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
|||+++++|.+++......+..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus 103 ~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~ 179 (291)
T cd06639 103 LELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 179 (291)
T ss_pred EEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEeecccchhcc
Confidence 999999999988754333456789999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCceeeecccCCCCccccccccccc---CCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 219 KENDFVSISATRGTIGYIAPELISRNF---GTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
..... .....|+..|+|||.+.... ..++.++|+|||||++|+|++|+.||....... .........
T Consensus 180 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~--------~~~~~~~~~ 249 (291)
T cd06639 180 STRLR--RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK--------TLFKIPRNP 249 (291)
T ss_pred ccccc--ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH--------HHHHHhcCC
Confidence 32211 12345888999999875421 136789999999999999999999986543211 111111111
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...... +..++..+.+++.+||+.+|++||++.++++
T Consensus 250 ~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 250 PPTLLH----PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred CCCCCc----ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111111 1234457899999999999999999999986
No 262
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=8.9e-39 Score=286.53 Aligned_cols=246 Identities=26% Similarity=0.341 Sum_probs=193.4
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCcc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLD 148 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~ 148 (373)
..||+|+||.||+|... ++..|++|.+..... ..+.+.+|+.+++.++|+||+++++++..+...++++||+++++|.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS 93 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence 57999999999999865 677899998876543 3467889999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC-CCceEEeeccCcccCCCCCCcee
Q 048542 149 RHVFPKESRGQSL--CWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH-NFIPKVSDFGLAKFHPKENDFVS 225 (373)
Q Consensus 149 ~~l~~~~~~~~~l--~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~ 225 (373)
+++... ...+ ++..+..++.|++.||+|||+. +++||||||+||+++. ++.++|+|||++........ .
T Consensus 94 ~~l~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~--~ 165 (268)
T cd06624 94 ALLRSK---WGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP--C 165 (268)
T ss_pred HHHHHh---cccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC--c
Confidence 988432 1234 7788889999999999999998 9999999999999976 67999999999875533221 1
Q ss_pred eecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchh
Q 048542 226 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEI 305 (373)
Q Consensus 226 ~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (373)
.....++..|+|||.+.+....++.++|+||+|+++|+|++|..||......... ......... ...+
T Consensus 166 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~------~~~~~~~~~------~~~~ 233 (268)
T cd06624 166 TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA------MFKVGMFKI------HPEI 233 (268)
T ss_pred cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh------Hhhhhhhcc------CCCC
Confidence 2233578899999998654335788999999999999999999998643321100 000000011 1122
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 306 ESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 306 ~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
+..++..+.+++.+||+.+|++|||+.++++
T Consensus 234 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 234 PESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 3345678999999999999999999999986
No 263
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=303.87 Aligned_cols=249 Identities=24% Similarity=0.420 Sum_probs=208.0
Q ss_pred HhhhhcccCCCCcEEEEEEEEc--CCc--eeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ--TGG--LIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~--~~~--~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
...+.++||+|.||.|++|.|. +|. .||||+++..... ..+|++|+.+|.+|+|+|++++||+..+ ....+||
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence 3456689999999999999876 343 6899999987655 4899999999999999999999999987 7788999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
|.++.|||.+.+.. .....+.......++.|||.||.||.++ ++||||+-.+|+|+.....+||+|||+.+.++.
T Consensus 190 ELaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hhcccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 99999999999965 3456688888899999999999999998 999999999999999999999999999998876
Q ss_pred CCCceeeec-ccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCc
Q 048542 220 ENDFVSISA-TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 297 (373)
Q Consensus 220 ~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (373)
......+.. ..-...|.|||.+.. ..++.++|||+||+.+|||++ |..||.+... ..+.+.++++..+
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh--~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--------~qIL~~iD~~erL 334 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRH--RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--------IQILKNIDAGERL 334 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhcc--ccccccchhhhhhhhHHhhhccCCCCCCCCCH--------HHHHHhccccccC
Confidence 665544433 335678999999976 489999999999999999998 6678765543 2345555544443
Q ss_pred ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 298 ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.. ++.+++++++++.+||..+|.+|||+..|.+
T Consensus 335 pR------Pk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 335 PR------PKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred CC------CCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 33 3456789999999999999999999999974
No 264
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=5.8e-39 Score=287.06 Aligned_cols=250 Identities=26% Similarity=0.371 Sum_probs=199.8
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
|++.+.||.|++|.||++.++ +++.+++|.+..... ...++.+|++.++.++||||+++++.+..+...++++||++
T Consensus 3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (265)
T cd06605 3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMD 82 (265)
T ss_pred chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecC
Confidence 567789999999999999876 688999999876533 33678899999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN-GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~-~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
+++|.+++... ...+++..+..++.|++.|++|||+ . +++|+||||+||+++.++.++|+|||.+........
T Consensus 83 ~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 83 GGSLDKILKEV---QGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred CCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence 99999888432 2678899999999999999999999 7 999999999999999999999999999875532211
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
....++..|+|||.+.+. .++.++|+||||+++|+|++|..||......... ... ..+............
T Consensus 157 ----~~~~~~~~y~~PE~~~~~--~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~- 226 (265)
T cd06605 157 ----KTFVGTSSYMAPERIQGN--DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG--IFE-LLQYIVNEPPPRLPS- 226 (265)
T ss_pred ----hcccCChhccCHHHHcCC--CCCchhhHHHHHHHHHHHHhCCCCCCcccccccc--HHH-HHHHHhcCCCCCCCh-
Confidence 115588899999998765 7888999999999999999999999755321111 011 111111111111111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..++..+.+++.+||..||++|||+.++++
T Consensus 227 ----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 227 ----GKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred ----hhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 115678999999999999999999999975
No 265
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=9.2e-39 Score=284.36 Aligned_cols=247 Identities=25% Similarity=0.362 Sum_probs=199.3
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|++.+.||+|+||.+|++... +++.+|+|.+..... ...++.+|+.+++.++||||+++++++......++|+||+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence 567789999999999999865 688999999875432 3357889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+.+... ....+++..+..++.|++.|+.|||++ +++|+||+|+||+++.++.++|+|||++........
T Consensus 82 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 82 EGGDLYKKINAQ--RGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 999998887432 234578899999999999999999998 999999999999999999999999999876543221
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
. .....|++.|+|||.+.+. ..+.++|+||||+++++|++|..||...... . .......+....
T Consensus 157 ~--~~~~~~~~~~~~pe~~~~~--~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-------~-~~~~~~~~~~~~---- 220 (256)
T cd08218 157 L--ARTCIGTPYYLSPEICENR--PYNNKSDIWALGCVLYEMCTLKHAFEAGNMK-------N-LVLKIIRGSYPP---- 220 (256)
T ss_pred h--hhhccCCccccCHHHhCCC--CCCCccchhHHHHHHHHHHcCCCCccCCCHH-------H-HHHHHhcCCCCC----
Confidence 1 1233578899999998764 6788999999999999999999998644321 1 112222222211
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.+..++..+.+++.+||+.+|++||++.++++
T Consensus 221 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 221 --VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred --CcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 12334667999999999999999999999987
No 266
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-41 Score=286.83 Aligned_cols=248 Identities=27% Similarity=0.355 Sum_probs=205.3
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
-+.+..+||+|+||.||++.++ +|+.+|||.+... .+..++..|+.+|++++.|++|++||.+.....+++|||||..
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 3456789999999999999866 7999999998754 3557889999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|++.+.+. .+++++++.++..++...++||+|||.. .-+|||||..|||++.+|.+||+|||.+..+.+. ..
T Consensus 113 GSiSDI~R---~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT--MA 184 (502)
T KOG0574|consen 113 GSISDIMR---ARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT--MA 184 (502)
T ss_pred CcHHHHHH---HhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhh--HH
Confidence 99999884 4568899999999999999999999987 7899999999999999999999999998754321 12
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
.-+...||+.|||||+++.- .|.+++||||||+...||..|++|+.+-.+-. ..+ . .....+.--.
T Consensus 185 KRNTVIGTPFWMAPEVI~EI--GY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR--AIF--------M--IPT~PPPTF~ 250 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEI--GYDTKADIWSLGITAIEMAEGRPPYSDIHPMR--AIF--------M--IPTKPPPTFK 250 (502)
T ss_pred hhCccccCcccccHHHHHHh--ccchhhhHhhhcchhhhhhcCCCCcccccccc--eeE--------e--ccCCCCCCCC
Confidence 23456799999999999875 68889999999999999999999987543211 000 0 0001111123
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
-+...+.++.+++++||-.+|++|-|+-++++
T Consensus 251 KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 251 KPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 34667889999999999999999999988875
No 267
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.9e-38 Score=283.80 Aligned_cols=257 Identities=24% Similarity=0.323 Sum_probs=202.1
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
.|++.+.||.|+||.||+|... ++..+++|++..... ....+.+|+..++.++|+|++++++.+..+...++++|++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 4667899999999999999865 678899999875443 3467899999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++..... ...+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus 82 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 82 SGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred CCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 99999988843221 24688999999999999999999998 999999999999999999999999999876544332
Q ss_pred ce--eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 223 FV--SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 223 ~~--~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.. ......|+..|+|||.+... ..++.++|+||||+++|+|++|..||....... ...... ........
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-------~~~~~~-~~~~~~~~ 228 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQV-HGYDFKADIWSFGITAIELATGAAPYSKYPPMK-------VLMLTL-QNDPPSLE 228 (267)
T ss_pred ccccccccccCChhhcChHHHccc-cCcCcccchHhHhHHHHHHHhCCCCccccChhh-------hHHHHh-cCCCCCcC
Confidence 21 11233588899999998654 357889999999999999999999986543211 011111 11111111
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.. .....++..+.+++.+||+.||++|||++++++
T Consensus 229 ~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 229 TG-ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred Cc-cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 10 001345678899999999999999999999986
No 268
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.8e-38 Score=285.60 Aligned_cols=256 Identities=27% Similarity=0.399 Sum_probs=199.2
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 136 (373)
..++..+.||+|+||.||+|+.+ +...+++|.+...... .+.+.+|+.++++++|+||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 34566789999999999999864 2457999988764433 367899999999999999999999999989999
Q ss_pred EEEeccCcCCccccccCCCCC-----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeec
Q 048542 137 LVYEYMPNGSLDRHVFPKESR-----GQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Df 211 (373)
+||||+++++|.+++...... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 999999999999988543321 12689999999999999999999998 9999999999999999999999999
Q ss_pred cCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHH
Q 048542 212 GLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQ 290 (373)
Q Consensus 212 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~ 290 (373)
|++....... ........++..|+|||.+.+. ..+.++||||||+++|+|++ |..||...... .....
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--------~~~~~ 230 (275)
T cd05046 162 SLSKDVYNSE-YYKLRNALIPLRWLAPEAVQED--DFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--------EVLNR 230 (275)
T ss_pred ccccccCccc-ccccCCceeEEeecChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCCccccchH--------HHHHH
Confidence 9986442221 1122333467789999988654 67789999999999999998 77777533211 11122
Q ss_pred HhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 291 LNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
...+. ..... +..++..+.+++.+||+.+|.+|||+.+++..|.
T Consensus 231 ~~~~~-~~~~~----~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 231 LQAGK-LELPV----PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHcCC-cCCCC----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 22111 11111 1224567899999999999999999999999885
No 269
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-38 Score=288.07 Aligned_cols=253 Identities=25% Similarity=0.343 Sum_probs=198.8
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
.|++.+.||+|+||.||++..+ ++..||+|.+..... ....+.+|+.+++.++|+||+++++.+..+...+++|||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 4678899999999999999876 789999998875422 2357889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|..++.... ....+++..+..++.+++.||.|||+. .+++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 157 (286)
T cd06622 82 DAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL- 157 (286)
T ss_pred CCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-
Confidence 9999988774321 134689999999999999999999962 289999999999999999999999999987543221
Q ss_pred ceeeecccCCCCccccccccccc----CCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNF----GTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~----~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
.....++..|+|||.+.+.. ..++.++|+|||||++|+|++|..||....... ....+.......
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--------~~~~~~~~~~~~ 226 (286)
T cd06622 158 ---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--------IFAQLSAIVDGD 226 (286)
T ss_pred ---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--------HHHHHHHHhhcC
Confidence 12345788999999885431 235789999999999999999999986432211 111111111101
Q ss_pred cCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 299 LQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 299 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
....+..++.++.+++.+||+.+|++||++++++.
T Consensus 227 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 227 ---PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ---CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 01222346778999999999999999999999987
No 270
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=9e-39 Score=289.03 Aligned_cols=257 Identities=23% Similarity=0.331 Sum_probs=198.7
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|++.+.||.|++|.||+|... +|+.||+|.+..... ..+.+.+|+.+++.++||||+++++++..+...++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM 81 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence 667889999999999999865 688999999876542 2367889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
+++|.+++... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 82 -~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 82 -PSDLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred -CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 99999887432 35689999999999999999999998 999999999999999999999999999886544321
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhc---------
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK--------- 293 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 293 (373)
.......++..|+|||.+.+. ..++.++||||+|+++|+|++|.+||........ + .........
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07832 155 -RLYSHQVATRWYRAPELLYGA-RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ---L-AIVFRTLGTPNEETWPGL 228 (286)
T ss_pred -CccccccCcccccCceeeecc-ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH---H-HHHHHHcCCCChHHHhhc
Confidence 122345688999999988653 3568899999999999999999777754332110 0 000000000
Q ss_pred -----CCCcccCcc-----chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 -----GGDLELQNV-----TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 -----~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
......... .......+..+.+++.+||+.+|.+|||++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 229 TSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred cCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000000 1111234578999999999999999999999986
No 271
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=6.8e-39 Score=289.44 Aligned_cols=252 Identities=25% Similarity=0.338 Sum_probs=197.1
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhccc-CCCceeeEeeEeee------CCeeE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLGFCSE------GSKRA 136 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~------~~~~~ 136 (373)
..|++.+.||.|+||.||+|... +++.+|+|++........++..|+.+++.+ +|+||+++++++.. ....+
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 95 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLW 95 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEE
Confidence 45677899999999999999865 688999999877655567788899999998 69999999998843 45789
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
++|||+++|+|.+++.... +..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++..
T Consensus 96 iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 96 LVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred EEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 9999999999998884322 34588888999999999999999998 999999999999999999999999999875
Q ss_pred CCCCCCceeeecccCCCCcccccccccc---cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhc
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRN---FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 293 (373)
...... ......|+..|+|||.+... ...++.++|+|||||++|+|++|..||....... .......
T Consensus 171 ~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~--------~~~~~~~ 240 (282)
T cd06636 171 LDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR--------ALFLIPR 240 (282)
T ss_pred hhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh--------hhhhHhh
Confidence 432211 12234588899999987531 2357789999999999999999999986543211 0011111
Q ss_pred CCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 GGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..... .....++..+.+++.+||+.||.+|||+.|+++
T Consensus 241 ~~~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 241 NPPPK-----LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred CCCCC-----CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 11111 111235668999999999999999999999975
No 272
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.3e-38 Score=283.37 Aligned_cols=246 Identities=28% Similarity=0.390 Sum_probs=198.2
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc------CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEE
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF------SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
|+..+.||+|++|.||+|... +++.|++|.+..... ..+.+.+|+.+++.++|+||+++++++.++...++++
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 456688999999999999876 789999998865331 2357889999999999999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
||+++++|.+++. +...+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 82 e~~~~~~L~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 82 ELVPGGSLAKLLK----KYGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EecCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 9999999998883 234588999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
.. ......++..|+|||.+... ..++.++|+||||+++|+|++|..||...... ............
T Consensus 155 ~~---~~~~~~~~~~y~~pe~~~~~-~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~--- 220 (258)
T cd06632 155 FS---FAKSFKGSPYWMAPEVIAQQ-GGYGLAADIWSLGCTVLEMATGKPPWSQLEGV-------AAVFKIGRSKEL--- 220 (258)
T ss_pred cc---cccccCCCcceeCHHHhcCC-CCCCchhhhHHHHHHHHHHHhCCCCcccCcHH-------HHHHHHHhcccC---
Confidence 32 12345588899999998654 13788999999999999999999998654311 111111110111
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...+..++..+.+++.+||+.+|++||+++++++
T Consensus 221 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 ---PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ---CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 1122335678899999999999999999999986
No 273
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.3e-38 Score=288.99 Aligned_cols=244 Identities=26% Similarity=0.356 Sum_probs=194.9
Q ss_pred hcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 70 THKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
...||+|+||.||++... ++..||||.+...... .+.+.+|+..++.++|+||+++++.+..+...+++|||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 467999999999999865 6889999998654332 35688999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeee
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 227 (373)
.+++. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++........ ...
T Consensus 107 ~~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~ 176 (292)
T cd06658 107 TDIVT-----HTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--KRK 176 (292)
T ss_pred HHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc--cCc
Confidence 88772 23588999999999999999999998 999999999999999999999999999875432221 112
Q ss_pred cccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhH
Q 048542 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIES 307 (373)
Q Consensus 228 ~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
...|+..|+|||.+.+. .++.++|+||||+++|+|++|+.||....... ............... ..
T Consensus 177 ~~~~~~~y~aPE~~~~~--~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~----~~ 242 (292)
T cd06658 177 SLVGTPYWMAPEVISRL--PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ--------AMRRIRDNLPPRVKD----SH 242 (292)
T ss_pred eeecCccccCHHHHccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhcCCCcccc----cc
Confidence 34588999999998654 67889999999999999999999987543211 111122111111111 12
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 308 MIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 308 ~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
.++..+.+++.+||+.||.+|||++++++.
T Consensus 243 ~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 243 KVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 345678899999999999999999999973
No 274
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.7e-38 Score=284.76 Aligned_cols=246 Identities=22% Similarity=0.366 Sum_probs=196.4
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc--cCHHHHHHHHHHhcccC---CCceeeEeeEeeeCCeeEEEEe
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK--FSAEEFINEVSTIGRIH---HVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~---h~ni~~~~~~~~~~~~~~lv~e 140 (373)
|++.+.||.|+||.||+|.+. +++.+|+|.+.... ...+++.+|+.+++.++ |||++++++++..+...+++||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 566788999999999999964 78899999987542 23467888999999986 9999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++++|.+++. ...+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~-----~~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 83 YAEGGSVRTLMK-----AGPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred cCCCCcHHHHHH-----ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 999999988873 23688999999999999999999998 9999999999999999999999999998866443
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.. ......|+..|+|||.+.+. ..++.++|+||||+++|+|++|..||........ . ..........+.
T Consensus 155 ~~--~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-------~-~~~~~~~~~~~~ 223 (277)
T cd06917 155 SS--KRSTFVGTPYWMAPEVITEG-KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-------M-MLIPKSKPPRLE 223 (277)
T ss_pred cc--ccccccCCcceeCHHHhccC-CccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-------h-hccccCCCCCCC
Confidence 31 12334588899999988643 3568899999999999999999999965432110 0 011111111111
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
. ..++..+.+++.+||+.||++||++.++++
T Consensus 224 ~-----~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 224 D-----NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred c-----ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 1 114567899999999999999999999986
No 275
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.9e-39 Score=290.72 Aligned_cols=261 Identities=24% Similarity=0.345 Sum_probs=193.0
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
.|++.+.||+|++|.||+|..+ +++.||+|.+..... ....+.+|+.+++.++|+||+++++++.++...++||||+
T Consensus 6 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07844 6 TYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYL 85 (291)
T ss_pred ceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecC
Confidence 5677799999999999999876 688999999875432 2245678999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++ +|.+++... ...+++..+..++.|+++||.|||+. +++|+||||+||+++.++.+||+|||++........
T Consensus 86 ~~-~L~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 86 DT-DLKQYMDDC---GGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred CC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence 74 888777422 34688999999999999999999998 999999999999999999999999999875432111
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc--------chHHHHHHHhcC
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY--------FPSWVYDQLNKG 294 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~--------~~~~~~~~~~~~ 294 (373)
......++..|+|||.+.+. ..++.++||||+|+++|+|++|..||........... .....+......
T Consensus 159 --~~~~~~~~~~~~aPE~~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 159 --TYSNEVVTLWYRPPDVLLGS-TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred --cccccccccccCCcHHhhcC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhc
Confidence 11223467889999987653 3577899999999999999999999965431100000 000000000000
Q ss_pred ---CC--cccCccchh---hHHHH--HHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 295 ---GD--LELQNVTEI---ESMIA--RKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 295 ---~~--~~~~~~~~~---~~~~~--~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.. ......... ...+. ..+.+++.+||+.+|++|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00 000000000 01122 67789999999999999999999875
No 276
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=8e-39 Score=296.28 Aligned_cols=274 Identities=21% Similarity=0.259 Sum_probs=199.5
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeC-----CeeE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEG-----SKRA 136 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-----~~~~ 136 (373)
..|++.+.||+|+||.||+|... +|+.||+|.+..... ...++.+|+.+++.++|+||+++++++... ...+
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 35777899999999999999865 788999999864322 335678899999999999999999887543 3579
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
+++||+.+ +|.+.+. ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 85 lv~e~~~~-~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 85 IVQELMET-DLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEehhccc-CHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceee
Confidence 99999964 7766652 34689999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCce-eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc--------hHHH
Q 048542 217 HPKENDFV-SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF--------PSWV 287 (373)
Q Consensus 217 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~--------~~~~ 287 (373)
........ ......|+..|+|||.+.+. ..++.++||||+||++|+|++|+.||............ ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 234 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDL 234 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 54322211 12234688999999987543 35788999999999999999999999654321100000 0000
Q ss_pred HH--------HHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH--HhcCCCCCCCC
Q 048542 288 YD--------QLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM--LEGSIDDLQMP 348 (373)
Q Consensus 288 ~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~--L~~~~~~~~~~ 348 (373)
.. ....................+..+.+++.+||+.+|.+|||+.++++. ++...+....|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~~~ 305 (336)
T cd07849 235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEP 305 (336)
T ss_pred HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCCcc
Confidence 00 000000000000011112346779999999999999999999999986 66665543333
No 277
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.6e-38 Score=281.35 Aligned_cols=246 Identities=24% Similarity=0.362 Sum_probs=197.6
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|++.+.||+|+||.||++... +++.+|+|.+..... ....+.+|+.+++.++|||++++++.+..+...++||||+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence 567789999999999999865 788999999876432 2367889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC-CceEEeeccCcccCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~-~~~kl~Dfg~~~~~~~~~ 221 (373)
++++|.+++... .+..+++..+..++.+++.|++|||++ +++|+||+|+||+++.+ +.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 82 PGGTLAEYIQKR--CNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 999999988432 245589999999999999999999998 99999999999999854 468999999998654332
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
. .....++..|+|||.+.+. ..+.++||||||+++|+|++|..||...... ..... ........
T Consensus 157 ~---~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-------~~~~~-~~~~~~~~--- 220 (256)
T cd08220 157 K---AYTVVGTPCYISPELCEGK--PYNQKSDIWALGCVLYELASLKRAFEAANLP-------ALVLK-IMSGTFAP--- 220 (256)
T ss_pred c---ccccccCCcccCchhccCC--CCCcccchHHHHHHHHHHHhCCCCcccCchH-------HHHHH-HHhcCCCC---
Confidence 1 1234588899999998764 6788999999999999999999998654321 11111 11111111
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.+..++..+.+++.+||+.+|++|||++|+++
T Consensus 221 ---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 221 ---ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ---CCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11234667899999999999999999999986
No 278
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.2e-38 Score=285.51 Aligned_cols=247 Identities=26% Similarity=0.326 Sum_probs=192.1
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc------CHHHHHHHHHHhcccCCCceeeEeeEeee--CCeeEE
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF------SAEEFINEVSTIGRIHHVNVVQLLGFCSE--GSKRAL 137 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~~l 137 (373)
|+..+.||+|+||.||+|... ++..|++|.+..... ....+.+|+.+++.++||||+++++++.+ ....++
T Consensus 4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 83 (266)
T cd06651 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTI 83 (266)
T ss_pred ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEE
Confidence 566789999999999999865 688999998864321 12467889999999999999999998865 357889
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
++||+++++|.+++. ....+++.....++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus 84 ~~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 84 FMEYMPGGSVKDQLK----AYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 999999999998883 234588899999999999999999998 9999999999999999999999999998754
Q ss_pred CCCCC-ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCC
Q 048542 218 PKEND-FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGD 296 (373)
Q Consensus 218 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
..... ........++..|+|||.+.+. .++.++|+||+||++|+|++|+.||...... ...........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~-------~~~~~~~~~~~- 226 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGE--GYGRKADVWSLGCTVVEMLTEKPPWAEYEAM-------AAIFKIATQPT- 226 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCC--CCCchhhhHHHHHHHHHHHHCCCCccccchH-------HHHHHHhcCCC-
Confidence 32111 1112234588899999998764 6788999999999999999999998643221 11111111111
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
....+..++..+.+++ +||..+|++||+++|+++
T Consensus 227 -----~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 -----NPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred -----CCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 1222344556777887 688899999999999975
No 279
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.6e-38 Score=288.20 Aligned_cols=242 Identities=27% Similarity=0.370 Sum_probs=197.8
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|.+.+.||+|+||.||++... +++.+|+|.+.... ...+.+.+|+++++.++||||+++++++.++...+++||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 3667799999999999999866 68899999987533 233668899999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++++|.+++. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++......
T Consensus 82 ~~~~~~L~~~~~----~~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 82 YVPGGELFSHLR----KSGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred cCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 999999998883 335689999999999999999999998 9999999999999999999999999998865433
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.....+++.|+|||.+.+. ..+.++|+||||+++|+|++|..||...... ........+. .
T Consensus 155 -----~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~-~--- 215 (290)
T cd05580 155 -----TYTLCGTPEYLAPEIILSK--GYGKAVDWWALGILIYEMLAGYPPFFDDNPI--------QIYEKILEGK-V--- 215 (290)
T ss_pred -----CCCCCCCccccChhhhcCC--CCCccccHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCC-c---
Confidence 1234588999999998664 6778999999999999999999998654411 1122222111 1
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCC-----CHHHHHH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRP-----SMTKVLE 336 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~ 336 (373)
..+..++..+.+++.+||+.||.+|+ +++|+++
T Consensus 216 ---~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 216 ---RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ---cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 11223457889999999999999999 7777763
No 280
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.5e-38 Score=329.94 Aligned_cols=265 Identities=22% Similarity=0.447 Sum_probs=199.8
Q ss_pred cChhHHHHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCee
Q 048542 57 YSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKR 135 (373)
Q Consensus 57 ~~~~~i~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 135 (373)
+++.++.. .+...+.||+|+||.||+|... ++..||+|.++...... ..|++.+++++||||++++++|.++...
T Consensus 683 ~~~~~~~~-~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~~~~l~~l~HpnIv~~~~~~~~~~~~ 758 (968)
T PLN00113 683 ITINDILS-SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP---SSEIADMGKLQHPNIVKLIGLCRSEKGA 758 (968)
T ss_pred hhHHHHHh-hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcccc---HHHHHHHhhCCCCCcceEEEEEEcCCCC
Confidence 34444432 3445578999999999999874 78899999987543322 3568899999999999999999999999
Q ss_pred EEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcc
Q 048542 136 ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 215 (373)
++||||+++|+|.+++. .++|..+..++.|+++|++|||..+..+++||||||+||+++.++..++. ||...
T Consensus 759 ~lv~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~ 830 (968)
T PLN00113 759 YLIHEYIEGKNLSEVLR-------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPG 830 (968)
T ss_pred EEEEeCCCCCcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccc
Confidence 99999999999999882 37899999999999999999995545599999999999999988887775 55543
Q ss_pred cCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcC-
Q 048542 216 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKG- 294 (373)
Q Consensus 216 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~- 294 (373)
..... ....++..|+|||.+.+. .++.++|||||||++|||++|+.||...... ......|........
T Consensus 831 ~~~~~------~~~~~t~~y~aPE~~~~~--~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~ 900 (968)
T PLN00113 831 LLCTD------TKCFISSAYVAPETRETK--DITEKSDIYGFGLILIELLTGKSPADAEFGV--HGSIVEWARYCYSDCH 900 (968)
T ss_pred ccccC------CCccccccccCcccccCC--CCCcccchhhHHHHHHHHHhCCCCCCcccCC--CCcHHHHHHHhcCccc
Confidence 22111 123578999999998764 7899999999999999999999998543221 112233332221111
Q ss_pred ----CCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 295 ----GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 295 ----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
...........+.....++.+++.+||+.||++|||++|+++.|+....
T Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 901 LDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred hhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 0111111112233445678899999999999999999999999998754
No 281
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=4.6e-39 Score=286.69 Aligned_cols=245 Identities=23% Similarity=0.290 Sum_probs=199.9
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
|++.+.||.|+||.||+|..+ +++.+|+|.+.... ...+.+.+|+.+++.++||||+++++.+.++...++++||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL 81 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence 567899999999999999876 68899999987543 2346788999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+.+++|.+.+. ...++++..+..++.|+++||.|||++ +++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~L~~~l~----~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 82 LLGGDLRYHLS----QKVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCHHHHHH----hcCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999998883 235789999999999999999999998 99999999999999999999999999987654332
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
......|+..|+|||.+.+. .++.++|+||+|+++|+|++|..||....... ..+....... .
T Consensus 155 ---~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~~~~-~------ 217 (258)
T cd05578 155 ---LTTSTSGTPGYMAPEVLCRQ--GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI-----RDQIRAKQET-A------ 217 (258)
T ss_pred ---cccccCCChhhcCHHHHccc--CCCCcccchhhHHHHHHHHhCCCCCCCCCccH-----HHHHHHHhcc-c------
Confidence 12345588899999998765 57889999999999999999999987654321 1122222111 1
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCH--HHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSM--TKVL 335 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~--~ell 335 (373)
....+...+..+.+++.+||+.||.+||++ +|++
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 218 DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 112223456789999999999999999999 6554
No 282
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.5e-38 Score=287.48 Aligned_cols=261 Identities=21% Similarity=0.289 Sum_probs=195.1
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|+..+.||.|++|.||+|... +++.||||.+..... ....+.+|+.+++.++||||+++++++.++...+++|||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 456788999999999999875 688999998875432 2257889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
. ++|.+++... .+..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++........
T Consensus 82 ~-~~l~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 82 H-QDLKKFMDAS--PLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred c-cCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 5 5787776432 245689999999999999999999998 999999999999999999999999999875533221
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc-------hHHHHHHHh---
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF-------PSWVYDQLN--- 292 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~-------~~~~~~~~~--- 292 (373)
......++..|+|||.+.+. ..++.++||||||+++|+|++|+.||............ ....+....
T Consensus 156 --~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07860 156 --TYTHEVVTLWYRAPEILLGC-KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLP 232 (284)
T ss_pred --ccccccccccccCCeEEecC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHH
Confidence 12233467889999988653 34578899999999999999999998754321100000 000000000
Q ss_pred ----cCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 293 ----KGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 293 ----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
................++..+.+++.+||+.||++|||++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 233 DYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00000000011112234567899999999999999999999985
No 283
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=7.5e-38 Score=281.93 Aligned_cols=246 Identities=23% Similarity=0.339 Sum_probs=198.4
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
.|++.+.||+|+||.||+|... ++..+|+|.+..... ....+.+|+.++..++||||+++++++..+...++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 4667789999999999999865 678999998865433 2357889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++. ...+++..+..++.+++.|+.|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~~l~~~i~-----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 85 GGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence 9999988873 24588999999999999999999998 999999999999999999999999999875533221
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
......++..|+|||.+.+. .++.++|+|||||++|+|++|..||...... ............
T Consensus 157 --~~~~~~~~~~y~~PE~~~~~--~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~----- 219 (277)
T cd06641 157 --KRNTFVGTPFWMAPEVIKQS--AYDSKADIWSLGITAIELAKGEPPHSELHPM--------KVLFLIPKNNPP----- 219 (277)
T ss_pred --hhccccCCccccChhhhccC--CCCchhhHHHHHHHHHHHHcCCCCCCccchH--------HHHHHHhcCCCC-----
Confidence 12234578899999988653 6788999999999999999999998643221 111112222111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
..+..++..+.+++.+||+.+|.+||++.++++.
T Consensus 220 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 220 -TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred -CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1223345678999999999999999999999983
No 284
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.4e-38 Score=292.03 Aligned_cols=265 Identities=21% Similarity=0.283 Sum_probs=196.1
Q ss_pred hhhhcccCCCCcEEEEEEEEc---CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeC--CeeEE
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ---TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEG--SKRAL 137 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~---~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~~~l 137 (373)
|++.+.||+|+||.||+|..+ ++..||+|.+.... ...+.+.+|+.+++.++||||+++++++.+. ...++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 567788999999999999865 47899999988633 2235678899999999999999999999887 78999
Q ss_pred EEeccCcCCccccccCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC----CCceEEeecc
Q 048542 138 VYEYMPNGSLDRHVFPKES-RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH----NFIPKVSDFG 212 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~----~~~~kl~Dfg 212 (373)
||||+++ ++.+.+..... ....+++..++.++.|++.||.|||+. +++||||||+||+++. ++.+||+|||
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 9999965 66555533222 234789999999999999999999998 9999999999999998 8999999999
Q ss_pred CcccCCCCCC-ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc-c-hHH---
Q 048542 213 LAKFHPKEND-FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY-F-PSW--- 286 (373)
Q Consensus 213 ~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~-~-~~~--- 286 (373)
++........ ........++..|+|||.+.+. ..++.++||||||+++|+|++|..||........... . ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred cccccCCCcccccccCCccccccccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 9886543322 1122344678899999987653 3567899999999999999999999976544321000 0 000
Q ss_pred HHHHH---------------------hcCCCcccCcc---chhhH--HHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 287 VYDQL---------------------NKGGDLELQNV---TEIES--MIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 287 ~~~~~---------------------~~~~~~~~~~~---~~~~~--~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
....+ ........... ..... ..+.++.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000 00000001100 00111 34567999999999999999999999986
No 285
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.3e-38 Score=289.34 Aligned_cols=253 Identities=20% Similarity=0.211 Sum_probs=198.2
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
|++.+.||+|+||.||++... +++.|++|.+..... ....+.+|+.+++.++||||+++++.+..+...+++|||
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 82 (305)
T cd05609 3 FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEY 82 (305)
T ss_pred ceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEec
Confidence 567789999999999999876 678999999876532 235677899999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+++++|.+++. ....+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 83 ~~g~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 83 VEGGDCATLLK----NIGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred CCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 99999999883 235689999999999999999999998 99999999999999999999999999886321100
Q ss_pred C-------------ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHH
Q 048542 222 D-------------FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVY 288 (373)
Q Consensus 222 ~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~ 288 (373)
. ........++..|+|||.+.+. .++.++|+|||||++|+|++|..||...... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~vl~el~~g~~pf~~~~~~--------~~~ 225 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQ--GYGKPVDWWAMGIILYEFLVGCVPFFGDTPE--------ELF 225 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHH
Confidence 0 0001123478889999998664 6788999999999999999999998643321 112
Q ss_pred HHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 289 DQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
.......... +. ....++..+.+++.+||+.||++||+..++.+.|+.
T Consensus 226 ~~~~~~~~~~-~~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 226 GQVISDDIEW-PE---GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHHhcccCC-CC---ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 2222111111 10 011345678999999999999999998877777775
No 286
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=4.9e-38 Score=280.84 Aligned_cols=252 Identities=27% Similarity=0.420 Sum_probs=200.2
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|++.+.||+|+||.||+|... +++.+++|.++.... ....+.+|+.+++.++|+||+++++++......++++||+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence 567789999999999999865 788999999887655 3467889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++. .+..+++..+..++.+++.|+.|||+. +++|+||+|+||+++.++.+||+|||++........
T Consensus 82 ~~~~L~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 82 SGGTLEELLE----HGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCcHHHHHh----hcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 9999999883 234578899999999999999999998 999999999999999999999999999886644332
Q ss_pred cee--eecccCCCCccccccccccc-CCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 223 FVS--ISATRGTIGYIAPELISRNF-GTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 223 ~~~--~~~~~gt~~y~aPE~~~~~~-~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
... .....++..|+|||.+.+.. ...+.++||||||+++|+|++|+.||....... .... ....+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~------~~~~-~~~~~~~~~~ 227 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF------QIMF-HVGAGHKPPI 227 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH------HHHH-HHhcCCCCCC
Confidence 111 12345788999999987642 237789999999999999999999996443211 0111 1111111122
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
+.. ..++..+.+++.+||+.+|++|||+++++.
T Consensus 228 ~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 228 PDS----LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred Ccc----cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 211 123567889999999999999999999875
No 287
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.8e-38 Score=287.55 Aligned_cols=244 Identities=25% Similarity=0.352 Sum_probs=195.0
Q ss_pred hcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 70 THKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
...||.|+||.||++... +++.||+|.+..... ..+.+.+|+..+..++|||++++++++..+...++++||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 457999999999999865 688999999865433 346788999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeee
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 227 (373)
...+. ...+++..+..++.|++.||+|||++ +++|+||||+||+++.++.++|+|||++........ ...
T Consensus 106 ~~~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~ 175 (297)
T cd06659 106 TDIVS-----QTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KRK 175 (297)
T ss_pred HHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--ccc
Confidence 88662 24588999999999999999999998 999999999999999999999999999875433221 122
Q ss_pred cccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhH
Q 048542 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIES 307 (373)
Q Consensus 228 ~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
...|+..|+|||.+.+. .++.++|||||||++|+|++|+.||....... ....+......... ...
T Consensus 176 ~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~----~~~ 241 (297)
T cd06659 176 SLVGTPYWMAPEVISRT--PYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--------AMKRLRDSPPPKLK----NAH 241 (297)
T ss_pred ceecCccccCHHHHccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhccCCCCcc----ccC
Confidence 34588999999998764 67889999999999999999999987443211 11111111111111 112
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 308 MIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 308 ~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
.++..+.+++.+||+.+|++||+++++++.
T Consensus 242 ~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 242 KISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 345678999999999999999999999983
No 288
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=8e-38 Score=285.97 Aligned_cols=247 Identities=26% Similarity=0.343 Sum_probs=194.7
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
..|...+.||+|+||.||+|... +++.||+|.+..... ...++.+|+.+++.++||||+++++++.+....++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 34677799999999999999865 688999998864322 1246889999999999999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
||+. |++.+.+.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~---~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 95 EYCL-GSASDILEV---HKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HhhC-CCHHHHHHH---cccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 9996 566665532 234689999999999999999999998 999999999999999999999999999875433
Q ss_pred CCCceeeecccCCCCccccccccc-ccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 220 ENDFVSISATRGTIGYIAPELISR-NFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
.. ...++..|+|||.+.+ ..+.++.++||||||+++|+|++|..||....... .... ........
T Consensus 168 ~~------~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~-------~~~~-~~~~~~~~ 233 (307)
T cd06607 168 AN------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALYH-IAQNDSPT 233 (307)
T ss_pred CC------CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH-------HHHH-HhcCCCCC
Confidence 22 2357889999998743 12467889999999999999999999986543211 0111 11111111
Q ss_pred cCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 299 LQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 299 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
.. ...++..+.+++.+||+.+|++||++.+++..
T Consensus 234 ~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 234 LS-----SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CC-----chhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 11 12356689999999999999999999999863
No 289
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.8e-38 Score=282.22 Aligned_cols=251 Identities=25% Similarity=0.404 Sum_probs=197.8
Q ss_pred hhhhcccCCCCcEEEEEEEE-cCCceeEEEEeccCcc-------CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEE
Q 048542 67 NHFTHKLGQGGFGSVYKGQL-QTGGLIAVKMLENSKF-------SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~-~~~~~vaiK~~~~~~~-------~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 138 (373)
|+..+.||+|++|.||++.. .+++.+|+|.+..... ..+.+.+|+.+++.++|+||+++++++.+....++|
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v 81 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF 81 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence 45568899999999999986 4788999999875331 135688999999999999999999999999999999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC-ceEEeeccCcccC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF-IPKVSDFGLAKFH 217 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~-~~kl~Dfg~~~~~ 217 (373)
+||+++++|.+++. ...++++..+..++.|++.||.|||++ +++|+||+|+||+++.++ .++|+|||.+...
T Consensus 82 ~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 82 VEWMAGGSVSHLLS----KYGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EeccCCCcHHHHHH----HhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 99999999998883 235688999999999999999999998 999999999999998765 6999999998765
Q ss_pred CCCCCce--eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 218 PKENDFV--SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 218 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
....... ......++..|+|||.+.+. .++.++|+||+|+++|+|++|..||........ ............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~--~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~ 228 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGE--QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH----LALIFKIASATT 228 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccC--CCCcccchHHHHHHHHHHHhCCCCCCCCCCcch----HHHHHHHhccCC
Confidence 4321110 11223578899999998664 678899999999999999999999864432111 111111111111
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
....+..++..+.+++.+||+.+|++|||+.++++
T Consensus 229 ------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 229 ------APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ------CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 12233456778999999999999999999999985
No 290
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.6e-38 Score=284.73 Aligned_cols=252 Identities=23% Similarity=0.361 Sum_probs=193.3
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC--HHHHHHHHHH-hcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS--AEEFINEVST-IGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~-l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|++.+.||+|+||.||++..+ +|..||+|.++..... ..++..|+.. ++.++||||+++++++..+...+++|||+
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 82 (283)
T cd06617 3 LEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVM 82 (283)
T ss_pred ceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhh
Confidence 566789999999999999876 6899999998765432 2455566664 56668999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
+ ++|.+++......+..+++..++.++.|++.||+|||++ .+++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 158 (283)
T cd06617 83 D-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV- 158 (283)
T ss_pred c-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeccccccccccc-
Confidence 6 678777644333446799999999999999999999974 279999999999999999999999999987653221
Q ss_pred ceeeecccCCCCcccccccccc--cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 223 FVSISATRGTIGYIAPELISRN--FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~--~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
......++..|+|||.+.+. ...++.++|+|||||++|+|++|+.||....... ..... .........+
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~-~~~~~~~~~~ 229 (283)
T cd06617 159 --AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF------QQLKQ-VVEEPSPQLP 229 (283)
T ss_pred --ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH------HHHHH-HHhcCCCCCC
Confidence 11234578899999988642 1356789999999999999999999986432210 11111 1111111111
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
. ..++..+.+++.+||..+|++|||++++++
T Consensus 230 ~-----~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 230 A-----EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred c-----cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 235678999999999999999999999986
No 291
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-39 Score=273.92 Aligned_cols=250 Identities=21% Similarity=0.253 Sum_probs=201.8
Q ss_pred Hhhhh-cccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhccc-CCCceeeEeeEeee----CCeeEEE
Q 048542 66 TNHFT-HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLGFCSE----GSKRALV 138 (373)
Q Consensus 66 ~~~~~-~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~----~~~~~lv 138 (373)
.|.+. ++||-|-.|+|..+..+ +|+++|+|++..+. ...+|+++.-.. .|||||.+++++.+ ..++.+|
T Consensus 62 dY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiV 137 (400)
T KOG0604|consen 62 DYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIV 137 (400)
T ss_pred hheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEee
Confidence 44444 78999999999999866 89999999987653 345788876666 59999999998854 4567799
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC---CCceEEeeccCcc
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH---NFIPKVSDFGLAK 215 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~---~~~~kl~Dfg~~~ 215 (373)
||.|+||.|...+..+ ....+++.++.+|+.||+.|+.|||+. +|.||||||+|+|... +..+||+|||.|+
T Consensus 138 mE~meGGeLfsriq~~--g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK 212 (400)
T KOG0604|consen 138 MECMEGGELFSRIQDR--GDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK 212 (400)
T ss_pred eecccchHHHHHHHHc--ccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccccccc
Confidence 9999999999888543 356799999999999999999999998 9999999999999964 5579999999998
Q ss_pred cCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 216 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 216 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
..... ......+-|+.|.|||++..+ .|+..+|+||+|+++|-|++|.+||....... ++..+...+..+.
T Consensus 213 ~t~~~---~~L~TPc~TPyYvaPevlg~e--KydkscdmwSlgVimYIlLCGyPPFYS~hg~a----ispgMk~rI~~gq 283 (400)
T KOG0604|consen 213 ETQEP---GDLMTPCFTPYYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA----ISPGMKRRIRTGQ 283 (400)
T ss_pred ccCCC---ccccCCcccccccCHHHhCch--hcCCCCCccchhHHHHHhhcCCCcccccCCcc----CChhHHhHhhccC
Confidence 65432 234567899999999999765 78888999999999999999999998765432 2223334444433
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
- .++ .+-...+|+..+++++.+|+.+|.+|.|+++++.
T Consensus 284 y-~FP--~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 284 Y-EFP--EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred c-cCC--ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 2 222 2334678899999999999999999999999976
No 292
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.3e-38 Score=279.62 Aligned_cols=248 Identities=27% Similarity=0.379 Sum_probs=202.6
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
+++.+.||+|++|.||+|..+ +++.+++|++..... ....+.+|+..+..++|+|++++++++......+++|||++
T Consensus 3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (264)
T cd06623 3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD 82 (264)
T ss_pred ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC
Confidence 566789999999999999876 589999999876543 34778999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN-GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~-~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
+++|.+++.. ...+++..+..++.|+++|++|||+ . +++|+||+|+||+++.++.++|+|||.+........
T Consensus 83 ~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 83 GGSLADLLKK----VGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 9999998832 3668999999999999999999999 8 999999999999999999999999999886543322
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
. .....++..|+|||.+.+. .++.++|+||||+++|+|++|..||....... ... ............
T Consensus 156 ~--~~~~~~~~~y~~pE~~~~~--~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~----~~~-~~~~~~~~~~~~---- 222 (264)
T cd06623 156 Q--CNTFVGTVTYMSPERIQGE--SYSYAADIWSLGLTLLECALGKFPFLPPGQPS----FFE-LMQAICDGPPPS---- 222 (264)
T ss_pred c--ccceeecccccCHhhhCCC--CCCchhhHHHHHHHHHHHHhCCCCCccccccC----HHH-HHHHHhcCCCCC----
Confidence 1 1234578899999998664 77889999999999999999999987654311 111 112222211111
Q ss_pred chhhHH-HHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 303 TEIESM-IARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 303 ~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.+.. ++..+.+++.+||+.+|++|||+.++++
T Consensus 223 --~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 223 --LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred --CCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1222 5678999999999999999999999987
No 293
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-39 Score=289.59 Aligned_cols=267 Identities=25% Similarity=0.369 Sum_probs=203.1
Q ss_pred hhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcc--cCCCceeeEeeEeeeCC----eeEEEEe
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGR--IHHVNVVQLLGFCSEGS----KRALVYE 140 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~--l~h~ni~~~~~~~~~~~----~~~lv~e 140 (373)
-++.+.||+|.||.||+|.+. ++.||||++.... ...|.+|-+++.. ++|+||+++++.-.... .++||++
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~--kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~ 288 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE--KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE 288 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-CceeEEEecCHHH--HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence 356688999999999999988 6999999997543 4567777777665 48999999998765444 7889999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCC------CCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC------DVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~------~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
|.+.|||.+++ +...++|....+++..+++||+|||+.. +++|+|||||.+|||+..++++.|+|||+|
T Consensus 289 fh~kGsL~dyL-----~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 289 FHPKGSLCDYL-----KANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eccCCcHHHHH-----HhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 99999999999 3566999999999999999999999742 468999999999999999999999999999
Q ss_pred ccCCCCCCceeeecccCCCCcccccccccccCCcC-----cccchHHHHHHHHHHHcCCCCCCCCcCcccc---------
Q 048542 215 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVS-----CKSDVYGFGMVLLEMAGGRRNSNMNATRSSK--------- 280 (373)
Q Consensus 215 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s-----~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~--------- 280 (373)
..+..........+..||.+|||||++.+. -++. .+.||||+|.++|||++...-+......+..
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEga-inl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGA-INLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhh-cccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 987655544445567899999999999774 2222 3589999999999999876544321111111
Q ss_pred -ccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 281 -AYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 281 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
..+.....-.+.+..++.+++.=.- -....-+++.+..||+.||+-|.|+.=+-+++..+..
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~~W~~-h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~ 505 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPDAWRK-HAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM 505 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChhhhhc-CccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence 1122222223334444444321111 1234568999999999999999999999998887644
No 294
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5e-38 Score=288.51 Aligned_cols=251 Identities=25% Similarity=0.297 Sum_probs=198.7
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC----HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS----AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|++.+.||+|++|.||+|... ++..+|+|.+...... ...+.+|+.+++.++|+||+++++.+......+++||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 3567789999999999999876 5889999998765432 3568889999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+.+++|.+++... .+..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 82 YCPGGELFRLLQRQ--PGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred ecCCCCHHHHHHhC--CCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 99999999887422 245689999999999999999999998 9999999999999999999999999998754322
Q ss_pred CCce---------------------------eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCC
Q 048542 221 NDFV---------------------------SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNM 273 (373)
Q Consensus 221 ~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~ 273 (373)
.... ......|+..|+|||.+.+. .++.++||||||+++|+|++|..||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Di~slG~ll~~l~~g~~pf~~ 234 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGD--GHGSAVDWWTLGILLYEMLYGTTPFKG 234 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCC--CCCchHHHHHHHHHHHHHhhCCCCCCC
Confidence 1100 01123578899999998764 678899999999999999999999975
Q ss_pred CcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCC----HHHHHH
Q 048542 274 NATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPS----MTKVLE 336 (373)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~ell~ 336 (373)
..... ......... ...... ..++..+.+++.+||+.||++||| +++++.
T Consensus 235 ~~~~~-------~~~~~~~~~--~~~~~~----~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 235 SNRDE-------TFSNILKKE--VTFPGS----PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CchHH-------HHHHHhcCC--ccCCCc----cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 54321 011111111 111111 115678999999999999999999 777776
No 295
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.1e-39 Score=296.85 Aligned_cols=245 Identities=21% Similarity=0.329 Sum_probs=206.5
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCH---HHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
-|.+.+.||+|.|++|.+|++. ++..||||++.+...+. ..+.+|+.+|+.++||||++++.+......+|+||||
T Consensus 57 ~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ey 136 (596)
T KOG0586|consen 57 LYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEY 136 (596)
T ss_pred ceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEe
Confidence 4566799999999999999865 79999999998865544 4578999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+.+|.+++++. +.....+..+..++.|+..|++|||++ +|+|||||++|+|++.+.++||+|||++..+....
T Consensus 137 a~~ge~~~yl~----~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~ 209 (596)
T KOG0586|consen 137 ASGGELFDYLV----KHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL 209 (596)
T ss_pred ccCchhHHHHH----hcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecccc
Confidence 99999999994 345566688899999999999999998 99999999999999999999999999998776433
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
.....+|++.|.|||++.+. ...++++|+||+|+++|.|+.|..||++....+....+ +. .
T Consensus 210 ---~lqt~cgsppyAaPEl~~g~-~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rv-------l~--------g 270 (596)
T KOG0586|consen 210 ---MLQTFCGSPPYAAPELFNGK-KYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRV-------LR--------G 270 (596)
T ss_pred ---cccccCCCCCccChHhhcCc-ccCCcceehhhhhhhheeeeecccccCCcccccccchh-------ee--------e
Confidence 23467899999999999987 46678999999999999999999999876543322110 11 1
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...++.-++.++.+|+++++-.+|.+|++++++.+
T Consensus 271 k~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 271 KYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred eecccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 12233344678999999999999999999999865
No 296
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=4.8e-38 Score=285.50 Aligned_cols=261 Identities=20% Similarity=0.263 Sum_probs=195.7
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeC--CeeEEEE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEG--SKRALVY 139 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~~~lv~ 139 (373)
.|++.+.||.|+||.||+|..+ ++..+++|.++..... ...+.+|+.+++.++||||+++++++... ...+++|
T Consensus 6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~ 85 (293)
T cd07843 6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVM 85 (293)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEe
Confidence 5777899999999999999976 6789999998754322 24567899999999999999999998777 8899999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
||++ ++|.+++... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 86 e~~~-~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 86 EYVE-HDLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred hhcC-cCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 9996 4887777432 23689999999999999999999998 999999999999999999999999999886544
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccch-------HHHHHHHh
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFP-------SWVYDQLN 292 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~-------~~~~~~~~ 292 (373)
... ......++..|+|||.+.+. ..++.++|+||+|+++|+|++|..||...........+. ...+....
T Consensus 159 ~~~--~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 159 PLK--PYTQLVVTLWYRAPELLLGA-KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred Ccc--ccccccccccccCchhhcCC-ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhh
Confidence 321 12334578899999988653 346789999999999999999999987543211100000 00000000
Q ss_pred c---CC--C-cccC---ccchhhHH-HHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 293 K---GG--D-LELQ---NVTEIESM-IARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 293 ~---~~--~-~~~~---~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
. .. . .... .....+.. ++..+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0 00 0 0000 00111111 3667899999999999999999999986
No 297
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=7.6e-38 Score=280.00 Aligned_cols=248 Identities=23% Similarity=0.279 Sum_probs=193.2
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc------CHHHHHHHHHHhcccCCCceeeEeeEeee--CCeeE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF------SAEEFINEVSTIGRIHHVNVVQLLGFCSE--GSKRA 136 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~~ 136 (373)
.|++.+.||+|+||.||+|... ++..||+|.+..... ..+.+.+|+.+++.++||||+++++++.+ ....+
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS 82 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence 3566789999999999999865 688999998764221 12567889999999999999999998865 35678
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
++|||+++++|.+++. +...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++..
T Consensus 83 ~v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 83 IFMEHMPGGSIKDQLK----SYGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEecCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 9999999999998873 234578888999999999999999998 999999999999999999999999999875
Q ss_pred CCCCCCc-eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 217 HPKENDF-VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 217 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
....... .......++..|+|||.+.+. .++.++|||||||++|+|++|+.||....... ..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~~ 226 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGE--GYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA-------AIFKIATQPT 226 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCC--CCCcchhHHHHHHHHHHHhhCCCCCCccchHH-------HHHHHhcCCC
Confidence 4321111 112334588899999998764 67889999999999999999999986432111 0111111111
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
....+..++..+.+++.+|+. +|++||+++++++
T Consensus 227 ------~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 227 ------NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred ------CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 112334566788999999995 9999999999986
No 298
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-39 Score=269.08 Aligned_cols=249 Identities=22% Similarity=0.322 Sum_probs=198.1
Q ss_pred hhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC--HHHHHHHHHHhcccC-CCceeeEeeEeeeCCeeEEEEeccC
Q 048542 68 HFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS--AEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
++...||.|+.|.||+++.+ +|..+|||.+...... .++++..+.++.+.+ +|+||+.+|+|..+...++.||.|
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM- 173 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM- 173 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-
Confidence 34577999999999999966 6889999999875433 367778888777665 899999999999999999999998
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+..+..++. ....++++..+-++...+++||.||..+ .+|+|||+||+|||+|+.|++||||||++-++-+...
T Consensus 174 s~C~ekLlk---rik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA- 247 (391)
T KOG0983|consen 174 STCAEKLLK---RIKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA- 247 (391)
T ss_pred HHHHHHHHH---HhcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeecccc-
Confidence 445555552 2346799999999999999999999976 5999999999999999999999999999986644332
Q ss_pred eeeecccCCCCcccccccccc-cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 224 VSISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~-~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
.+...|.+.|||||.+.-. ...|+.++||||||+.++||.||..||.....+ ..+...+.+...+.++.
T Consensus 248 --htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-------Fe~ltkvln~ePP~L~~- 317 (391)
T KOG0983|consen 248 --HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-------FEVLTKVLNEEPPLLPG- 317 (391)
T ss_pred --cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-------HHHHHHHHhcCCCCCCc-
Confidence 2344588999999998654 457888999999999999999999999876643 12333333322222221
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...++..+++++..||+.|+.+||...++++
T Consensus 318 ---~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 318 ---HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred ---ccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 1237888999999999999999999999876
No 299
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=5.2e-38 Score=285.29 Aligned_cols=249 Identities=26% Similarity=0.352 Sum_probs=199.6
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
.+|.+.+.||+|+||.||++... ++..+++|.+..... ..+.+.+|+.+++.++|||++++++.+......++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 46778899999999999999864 678999999865433 3467889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++. ...+++..+..++.|++.|+.|||++ +++|+||+|+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~-----~~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 99 AGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred CCCcHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 9999998873 23578889999999999999999998 999999999999999999999999998875543322
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
. .....+++.|+|||.+.+. .++.++|+||||+++|++++|..||.......... ...........
T Consensus 171 ~--~~~~~~~~~y~~PE~~~~~--~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~--------~~~~~~~~~~~-- 236 (293)
T cd06647 171 K--RSTMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY--------LIATNGTPELQ-- 236 (293)
T ss_pred c--cccccCChhhcCchhhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee--------ehhcCCCCCCC--
Confidence 1 1234588899999998664 67889999999999999999999997544321100 00111111111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
.+..++..+.+++.+||+.+|++||++++++..
T Consensus 237 --~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 237 --NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred --CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 122345678999999999999999999999864
No 300
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.3e-39 Score=299.07 Aligned_cols=244 Identities=23% Similarity=0.349 Sum_probs=200.7
Q ss_pred hhhcccCCCCcEEEEEEEEc-CCceeEEEEecc-----CccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCe--eEEEE
Q 048542 68 HFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLEN-----SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSK--RALVY 139 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~-----~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~--~~lv~ 139 (373)
++...||+|+|-+||+|.+. +|-.||--.++. +....++|.+|+++|+.|+||||+++|+++.+... ..+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 34478999999999999865 676776544332 22233789999999999999999999999977554 77899
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC-CCceEEeeccCcccCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH-NFIPKVSDFGLAKFHP 218 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~-~~~~kl~Dfg~~~~~~ 218 (373)
|.+..|+|..+. .+.+......+..|+.||++||.|||++ +++|+|||||.+||+|++ .|.+||+|+|+|....
T Consensus 123 EL~TSGtLr~Y~----kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r 197 (632)
T KOG0584|consen 123 ELFTSGTLREYR----KKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR 197 (632)
T ss_pred ecccCCcHHHHH----HHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence 999999999998 4456688889999999999999999997 789999999999999984 5899999999999765
Q ss_pred CCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
... .....|||.|||||+... .|+..+||||||+.++||.|+..||....+. ..+++.+..|..+.
T Consensus 198 ~s~----aksvIGTPEFMAPEmYEE---~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~-------AQIYKKV~SGiKP~ 263 (632)
T KOG0584|consen 198 KSH----AKSVIGTPEFMAPEMYEE---NYNELVDVYAFGMCMLEMVTSEYPYSECTNP-------AQIYKKVTSGIKPA 263 (632)
T ss_pred ccc----cceeccCccccChHHHhh---hcchhhhhhhhhHHHHHHHhccCChhhhCCH-------HHHHHHHHcCCCHH
Confidence 433 233679999999999873 7899999999999999999999999877653 44667777776554
Q ss_pred cCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 299 LQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 299 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.-..-. ...++++|.+|+.. .++|||+.|+|+
T Consensus 264 sl~kV~-----dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 264 ALSKVK-----DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HhhccC-----CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 221111 25789999999999 999999999986
No 301
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3.5e-38 Score=284.85 Aligned_cols=261 Identities=23% Similarity=0.289 Sum_probs=195.8
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|++.+.||.|++|.||+|..+ +|..||+|++..... ..+.+.+|+.+++.++|||++++++++.++...+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 356788999999999999865 789999999875432 2356889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
+ ++|.+++.... ...+++..+..++.|+++||+|||++ +++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~-~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 81 D-LDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred C-cCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 4 68888774322 24689999999999999999999998 999999999999999999999999999875432211
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc-------chHHHHHHH----
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY-------FPSWVYDQL---- 291 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~-------~~~~~~~~~---- 291 (373)
......++..|+|||.+.+. ..++.++|+||||+++|+|++|+.||........... .....+...
T Consensus 155 --~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07835 155 --TYTHEVVTLWYRAPEILLGS-RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLP 231 (283)
T ss_pred --ccCccccccCCCCCceeecC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhch
Confidence 11223468899999987653 3568899999999999999999999875432110000 000000000
Q ss_pred ---hcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 292 ---NKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 292 ---~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.................++..+.+++.+||+.||.+|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 232 DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000001111222345578999999999999999999999985
No 302
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.3e-38 Score=285.60 Aligned_cols=262 Identities=21% Similarity=0.306 Sum_probs=197.7
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
+|++.+.||+|+||.||+|.++ +++.||+|.++.... ..+.+.+|+.+++.++|+||+++++++..+...+++|||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 4677899999999999999876 678999998875432 236788999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
++++.+..+. .+...+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~----~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 82 VERTLLELLE----ASPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred CCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 9887766544 2234588999999999999999999998 99999999999999999999999999988654433
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc-------chHHHHHHHhc-
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY-------FPSWVYDQLNK- 293 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~-------~~~~~~~~~~~- 293 (373)
. .......++..|+|||.+.+. ..++.++|+||||+++|+|++|..||........... .+.........
T Consensus 155 ~-~~~~~~~~~~~~~~PE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07833 155 A-SPLTDYVATRWYRAPELLVGD-TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSN 232 (288)
T ss_pred c-ccccCcccccCCcCCchhcCC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccC
Confidence 2 112234578889999998653 2677899999999999999999999875432110000 00000000000
Q ss_pred ----C-CCcccCccc----hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 ----G-GDLELQNVT----EIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 ----~-~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
+ ......... ..+..++..+.+++.+||+.+|++|||++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 233 PRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0 000000000 112234678999999999999999999999876
No 303
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=6.5e-38 Score=284.81 Aligned_cols=260 Identities=21% Similarity=0.298 Sum_probs=193.6
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccC-CCceeeEeeEeeeCCe-----e
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIH-HVNVVQLLGFCSEGSK-----R 135 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~-----~ 135 (373)
.|++.+.||+|+||.||+|... +++.||+|.++.... ....+.+|+.+++.++ ||||+++++++..... .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 3567789999999999999865 688999998865432 2356788999999995 6999999999876655 8
Q ss_pred EEEEeccCcCCccccccCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC-CCceEEeeccC
Q 048542 136 ALVYEYMPNGSLDRHVFPKESR-GQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH-NFIPKVSDFGL 213 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~-~~~~kl~Dfg~ 213 (373)
+++|||+++ +|.+++...... +..+++..+..++.||+.||.|||+. +++||||+|+||+++. ++.+||+|||+
T Consensus 82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeeccc
Confidence 999999975 787777443222 45689999999999999999999998 9999999999999998 88999999999
Q ss_pred cccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhc
Q 048542 214 AKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK 293 (373)
Q Consensus 214 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 293 (373)
+........ ......+++.|+|||.+.+. ..++.++|+||||+++|+|++|..||......... .. ....+..
T Consensus 158 ~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~---~~-~~~~~~~ 230 (295)
T cd07837 158 GRAFSIPVK--SYTHEIVTLWYRAPEVLLGS-THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQL---LH-IFKLLGT 230 (295)
T ss_pred ceecCCCcc--ccCCcccccCCCChHHhhCC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHH---HH-HHHHhCC
Confidence 875432211 11223467889999988653 35788999999999999999999998754321100 00 0000000
Q ss_pred CCC---------------c--ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 GGD---------------L--ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 ~~~---------------~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
... . ...........++..+.+++.+||+.||.+|||++|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 231 PTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000 0 000001111235678999999999999999999999875
No 304
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.8e-38 Score=283.52 Aligned_cols=242 Identities=24% Similarity=0.332 Sum_probs=186.8
Q ss_pred ccCCCCcEEEEEEEEc-CCceeEEEEeccCccC----HHHHHHHHHHhc---ccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS----AEEFINEVSTIG---RIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 72 ~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~---~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
.||+|+||.||++... +++.+|+|.+...... ...+.+|..+++ ..+||||+.+++.+..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999865 6889999988754322 123344444333 3479999999999999899999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~L~~~i~----~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 81 GGDLHYHLS----QHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred CCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 999988773 335689999999999999999999998 99999999999999999999999999986543222
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
.....|+..|+|||.+.+. ..++.++|+||+||++|+|++|..||........ .... ...... ..
T Consensus 152 --~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-----~~~~-~~~~~~------~~ 216 (279)
T cd05633 152 --PHASVGTHGYMAPEVLQKG-TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-----HEID-RMTLTV------NV 216 (279)
T ss_pred --ccCcCCCcCccCHHHhcCC-CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-----HHHH-HHhhcC------Cc
Confidence 1234589999999987542 3578899999999999999999999975432211 0111 111111 11
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCC-----CHHHHHHH
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRP-----SMTKVLEM 337 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~~ 337 (373)
..+..++.++.+++.+||+.||++|| |++++++.
T Consensus 217 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 217 ELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 22344567899999999999999999 59988773
No 305
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5.5e-38 Score=283.69 Aligned_cols=262 Identities=23% Similarity=0.315 Sum_probs=197.8
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
|++.+.||.|++|.||+|..+ +|..||+|.++.... ....+.+|+.+++.++|+||+++++++.+.+..++||||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD 81 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence 567789999999999999976 688999999876432 34667889999999999999999999999999999999997
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+ +|.+++.... ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 82 ~-~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 82 K-DLKKYMDTHG-VRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred c-cHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 5 7877764332 235689999999999999999999998 999999999999999999999999999875432211
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc-------hHHHHHHHhcCC-
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF-------PSWVYDQLNKGG- 295 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~-------~~~~~~~~~~~~- 295 (373)
......++..|++||.+.+. ..++.++|+||||+++|+|++|..||............ ....+..+....
T Consensus 156 -~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 156 -TFSNEVVTLWYRAPDVLLGS-RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred -ccccccccccccChHHhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence 11233478889999988653 35678999999999999999999998755432110000 000011111000
Q ss_pred -CcccC-----ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 296 -DLELQ-----NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 296 -~~~~~-----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
....+ .........+..+.+++.+||+.||.+||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 011122344678899999999999999999999985
No 306
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5.2e-38 Score=290.94 Aligned_cols=265 Identities=21% Similarity=0.276 Sum_probs=197.4
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccC---ccCHHHHHHHHHHhcccCCCceeeEeeEeeeC-----CeeE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENS---KFSAEEFINEVSTIGRIHHVNVVQLLGFCSEG-----SKRA 136 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-----~~~~ 136 (373)
+|.+.+.||+|+||.||+|... ++..||||.+... ......+.+|+.+++.++|+||+++++++... ...+
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence 5677889999999999999865 7889999998753 22345677899999999999999999987644 3479
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
+++||+. ++|.+++. .+..+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++..
T Consensus 86 lv~e~~~-~~L~~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 86 IVYELMD-TDLHQIIR----SSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEeCCC-CCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 9999995 68877773 345689999999999999999999998 999999999999999999999999999986
Q ss_pred CCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc-------------
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF------------- 283 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~------------- 283 (373)
...... ......++..|+|||.+.+. ..++.++|+|||||++|+|++|+.||............
T Consensus 158 ~~~~~~--~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07858 158 TSEKGD--FMTEYVVTRWYRAPELLLNC-SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLG 234 (337)
T ss_pred cCCCcc--cccccccccCccChHHHhcC-CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 543321 12234578899999987643 35788999999999999999999999654311000000
Q ss_pred ---hHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH--HhcC
Q 048542 284 ---PSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM--LEGS 341 (373)
Q Consensus 284 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~--L~~~ 341 (373)
.........................++..+.+++.+||+.+|++|||++++++. ++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 235 FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 000000000000000001111223457789999999999999999999999876 6554
No 307
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.7e-38 Score=287.27 Aligned_cols=261 Identities=18% Similarity=0.237 Sum_probs=183.8
Q ss_pred HHHHHHhhhhcccCCCCcEEEEEEEEcC----CceeEEEEeccCccCH------------HHHHHHHHHhcccCCCceee
Q 048542 61 QIIAMTNHFTHKLGQGGFGSVYKGQLQT----GGLIAVKMLENSKFSA------------EEFINEVSTIGRIHHVNVVQ 124 (373)
Q Consensus 61 ~i~~~~~~~~~~ig~G~~g~V~~~~~~~----~~~vaiK~~~~~~~~~------------~~~~~e~~~l~~l~h~ni~~ 124 (373)
++....|++.+.||+|+||.||+|...+ +..+|+|+........ .....+...+..+.|+|++.
T Consensus 8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~ 87 (294)
T PHA02882 8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK 87 (294)
T ss_pred ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence 3445578889999999999999998663 3466777543322211 11223445566778999999
Q ss_pred EeeEeeeCC----eeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeee
Q 048542 125 LLGFCSEGS----KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILL 200 (373)
Q Consensus 125 ~~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~ 200 (373)
+++.+.... ..+++++++. .++.+.+. .....++..+..++.|++.||+|||+. +++||||||+|||+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill 159 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLV-ENTKEIFK----RIKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMV 159 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhc-cCHHHHHH----hhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 998765443 3467778763 35544442 123356788899999999999999998 99999999999999
Q ss_pred eCCCceEEeeccCcccCCCCCCc-----eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCc
Q 048542 201 DHNFIPKVSDFGLAKFHPKENDF-----VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNA 275 (373)
Q Consensus 201 ~~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~ 275 (373)
+.++.++|+|||+++........ .......||+.|+|||.+.+. .++.++|||||||++|+|++|..||....
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~--~~~~~~DiwSlG~~l~el~~g~~P~~~~~ 237 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGA--CVTRRGDLESLGYCMLKWAGIKLPWKGFG 237 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCC--CCCcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999765322211 111234699999999998765 78899999999999999999999997653
Q ss_pred Ccccccc-chHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 276 TRSSKAY-FPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 276 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
....... ........+..+. ... ...+..+.+++..||+.+|++||+++++++.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 238 HNGNLIHAAKCDFIKRLHEGK-IKI-------KNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred cchHHHHHhHHHHHHHhhhhh-hcc-------CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 2211000 0000111111111 011 123467899999999999999999999999763
No 308
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=5.1e-38 Score=284.08 Aligned_cols=261 Identities=22% Similarity=0.283 Sum_probs=195.6
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc---cCHHHHHHHHHHhcccCCCceeeEeeEeeeC--CeeEEEEe
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK---FSAEEFINEVSTIGRIHHVNVVQLLGFCSEG--SKRALVYE 140 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~~~lv~e 140 (373)
|++.+.||.|++|.||+|... +++.+|+|.+.... .....+.+|+.+++.++|+|++++++++... ...++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 456788999999999999876 57899999998653 2335688999999999999999999999887 88999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++ +|.+++... ...+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~-~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMDH-DLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred cccc-cHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 9964 887777322 25689999999999999999999998 9999999999999999999999999999866443
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHH-------HHHHH--
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSW-------VYDQL-- 291 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-------~~~~~-- 291 (373)
.. .......++..|+|||.+.+. ..++.++||||||+++|+|++|..||...........+... .+...
T Consensus 154 ~~-~~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 154 NS-ADYTNRVITLWYRPPELLLGA-TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSK 231 (287)
T ss_pred Cc-ccccccccccccCCceeeEcc-ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccccc
Confidence 21 112334567889999987653 35788999999999999999999998754421100000000 00000
Q ss_pred ---hcCCCcccCc---cchhhHH-HHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 292 ---NKGGDLELQN---VTEIESM-IARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 292 ---~~~~~~~~~~---~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.......... ..+.... ++..+.+++.+||+.+|++||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000000 0011111 2678899999999999999999999986
No 309
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=4.6e-38 Score=283.85 Aligned_cols=258 Identities=22% Similarity=0.276 Sum_probs=192.7
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC--HHHHHHHHHHhcccC-CCceeeEeeEeeeC--CeeEEEEe
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS--AEEFINEVSTIGRIH-HVNVVQLLGFCSEG--SKRALVYE 140 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~--~~~~lv~e 140 (373)
|++.+.||+|+||.||+|... +++.+|+|.++..... .....+|+..+.++. |+|++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 456788999999999999865 6889999998764322 234457888888885 99999999999887 88999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|++ +++.+.+.. ....+++..+..++.|++.||+|||+. +++|+||+|+||+++. +.+||+|||++......
T Consensus 81 ~~~-~~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 81 LMD-MNLYELIKG---RKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred cCC-ccHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 996 577776632 234689999999999999999999998 9999999999999999 99999999999865433
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc-------chHHHHHHHhc
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY-------FPSWVYDQLNK 293 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~-------~~~~~~~~~~~ 293 (373)
... ....++..|+|||.+.+. +.++.++|+||+||++|+|++|..||........... ...........
T Consensus 153 ~~~---~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07831 153 PPY---TEYISTRWYRAPECLLTD-GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRK 228 (282)
T ss_pred CCc---CCCCCCcccCChhHhhcC-CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcc
Confidence 221 233578899999976543 3567899999999999999999999975442110000 00000111111
Q ss_pred CCCcc--cCc-----cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 GGDLE--LQN-----VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 ~~~~~--~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..... .+. .......++..+.+++.+||+.+|++|||++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 11110 100 01122345788999999999999999999999986
No 310
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=6.7e-38 Score=278.57 Aligned_cols=247 Identities=28% Similarity=0.415 Sum_probs=201.8
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|++.+.||.|+||.||++..+ +++.+++|.+..... ...++.+|+.+++.++|+||+++++++.+....++|+||+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence 566789999999999999865 778999999876433 2356778999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++......+..+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++.......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~- 157 (256)
T cd08530 82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNM- 157 (256)
T ss_pred CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccCC-
Confidence 99999988855434456789999999999999999999998 99999999999999999999999999998664431
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
.....++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||....... .......+...
T Consensus 158 ---~~~~~~~~~~~~Pe~~~~~--~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~----- 219 (256)
T cd08530 158 ---AKTQIGTPHYMAPEVWKGR--PYSYKSDIWSLGCLLYEMATFAPPFEARSMQD--------LRYKVQRGKYP----- 219 (256)
T ss_pred ---cccccCCccccCHHHHCCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhcCCCC-----
Confidence 1234588899999998764 67889999999999999999999986543211 11122222211
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..+..++.++.+++.+||+.+|++|||+.++++
T Consensus 220 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 220 -PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred -CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 122345678999999999999999999999986
No 311
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-38 Score=307.05 Aligned_cols=269 Identities=18% Similarity=0.247 Sum_probs=185.8
Q ss_pred HHHHHHhhhhcccCCCCcEEEEEEEEc--CCceeEEE------------------EeccCccCHHHHHHHHHHhcccCCC
Q 048542 61 QIIAMTNHFTHKLGQGGFGSVYKGQLQ--TGGLIAVK------------------MLENSKFSAEEFINEVSTIGRIHHV 120 (373)
Q Consensus 61 ~i~~~~~~~~~~ig~G~~g~V~~~~~~--~~~~vaiK------------------~~~~~~~~~~~~~~e~~~l~~l~h~ 120 (373)
+.....|++.+.||+|+||+||+|..+ ++...+.| .+.........+.+|+.+++.++||
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 344567889999999999999998754 22222222 1222222235678999999999999
Q ss_pred ceeeEeeEeeeCCeeEEEEeccCcCCccccccCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCee
Q 048542 121 NVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKES-RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNIL 199 (373)
Q Consensus 121 ni~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil 199 (373)
||+++++++......|++++++. ++|.+++..... .........+..++.|++.||.|||++ +|+||||||+|||
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NIL 299 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIF 299 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence 99999999999999999999984 466666533211 122234566778999999999999998 9999999999999
Q ss_pred eeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCC-CcCcc
Q 048542 200 LDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNM-NATRS 278 (373)
Q Consensus 200 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~-~~~~~ 278 (373)
++.++.+||+|||++.......... .....||..|+|||++.+. .++.++|||||||++|+|++|..++.. .....
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~ 376 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKEREAF-DYGWVGTVATNSPEILAGD--GYCEITDIWSCGLILLDMLSHDFCPIGDGGGKP 376 (501)
T ss_pred ECCCCCEEEEeCCCceecCcccccc-cccccCCcCCCCchhhcCC--CCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCH
Confidence 9999999999999998664332211 1234699999999999764 688899999999999999998754432 22111
Q ss_pred cccc-------------ch---HHHHHHHhcCCCcccC-ccchh--hHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 279 SKAY-------------FP---SWVYDQLNKGGDLELQ-NVTEI--ESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 279 ~~~~-------------~~---~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.... ++ ...++.+......... ..... ...++.++.+++.+||+.||.+|||+.|++.
T Consensus 377 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 377 GKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000 00 0001111100000000 00000 0113456788899999999999999999986
No 312
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2e-37 Score=280.44 Aligned_cols=249 Identities=28% Similarity=0.376 Sum_probs=201.2
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
.|.+.+.||.|++|.||+|.++ ++..+++|.+.......+.+.+|+..++.++|+|++++++.+......++++||+++
T Consensus 20 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 99 (286)
T cd06614 20 LYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDG 99 (286)
T ss_pred cchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCC
Confidence 4566788999999999999976 688999999987655567788999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 100 ~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 171 (286)
T cd06614 100 GSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS-- 171 (286)
T ss_pred CcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccchh--
Confidence 99999984321 3789999999999999999999998 999999999999999999999999998875543221
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
......++..|+|||.+.+. .++.++|+||||+++|+|++|..||....... ... ...........
T Consensus 172 ~~~~~~~~~~y~~PE~~~~~--~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-------~~~-~~~~~~~~~~~---- 237 (286)
T cd06614 172 KRNSVVGTPYWMAPEVIKRK--DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-------ALF-LITTKGIPPLK---- 237 (286)
T ss_pred hhccccCCcccCCHhHhcCC--CCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-------HHH-HHHhcCCCCCc----
Confidence 11233478899999998764 67889999999999999999999986433211 011 11111111111
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
....++..+.+++.+||+.+|.+|||+.++++
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 238 NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred chhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 11234567899999999999999999999985
No 313
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.4e-37 Score=276.43 Aligned_cols=249 Identities=27% Similarity=0.422 Sum_probs=203.4
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|.+.+.||.|+||.||++... ++..+++|.+..... ....+.+|+++++.++|+|++++++.+......++++||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence 566788999999999999866 688999999876543 3467889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+.+......+..+++..+..++.+++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+........
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 158 (258)
T cd08215 82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD 158 (258)
T ss_pred CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCcc
Confidence 99999988855433457799999999999999999999998 999999999999999999999999999886544331
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
......|++.|+|||...+. .++.++|+||+|+++++|++|..||...... .............+
T Consensus 159 --~~~~~~~~~~y~~pe~~~~~--~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~--- 223 (258)
T cd08215 159 --LAKTVVGTPYYLSPELCQNK--PYNYKSDIWSLGCVLYELCTLKHPFEGENLL--------ELALKILKGQYPPI--- 223 (258)
T ss_pred --eecceeeeecccChhHhccC--CCCccccHHHHHHHHHHHHcCCCCCCCCcHH--------HHHHHHhcCCCCCC---
Confidence 22334688899999987664 6788999999999999999999998654321 12222222221111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
+..++..+.+++.+||+.+|++|||+.++++
T Consensus 224 ---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 224 ---PSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred ---CCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 2244568899999999999999999999986
No 314
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.4e-37 Score=276.21 Aligned_cols=240 Identities=24% Similarity=0.320 Sum_probs=193.6
Q ss_pred cCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 73 ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
||.|++|.||+|... +++.+|+|.+..... ..+.+.+|+.+++.++||||+++++.+.++...++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999976 588999999876432 236788999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeee
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 227 (373)
.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~ 150 (262)
T cd05572 81 WTILRD----RGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTW 150 (262)
T ss_pred HHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccc
Confidence 998832 34588999999999999999999998 99999999999999999999999999998664432 112
Q ss_pred cccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhc-CCCcccCccchhh
Q 048542 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK-GGDLELQNVTEIE 306 (373)
Q Consensus 228 ~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 306 (373)
...++..|+|||.+.+. .++.++|+||+|+++|+|++|..||....... ......... ..... .+
T Consensus 151 ~~~~~~~~~~PE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~------~~ 216 (262)
T cd05572 151 TFCGTPEYVAPEIILNK--GYDFSVDYWSLGILLYELLTGRPPFGEDDEDP------MEIYNDILKGNGKLE------FP 216 (262)
T ss_pred cccCCcCccChhHhcCC--CCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH------HHHHHHHhccCCCCC------CC
Confidence 33578899999998654 67889999999999999999999997654311 111112221 11111 12
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCC-----HHHHHH
Q 048542 307 SMIARKLCMIGLWCIQVKAADRPS-----MTKVLE 336 (373)
Q Consensus 307 ~~~~~~l~~li~~cl~~dp~~Rps-----~~ell~ 336 (373)
...+..+.+++.+||+.+|++||+ ++|+++
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 223568999999999999999999 777765
No 315
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.2e-37 Score=282.18 Aligned_cols=255 Identities=25% Similarity=0.324 Sum_probs=192.1
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC--HHHHHHHHHHhcccC-CCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS--AEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
+...+.||+|+||.||++... +++.+|+|.+...... ...+.+|+.++.++. |+||+++++++..+...+++|||+
T Consensus 6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~ 85 (288)
T cd06616 6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM 85 (288)
T ss_pred hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence 445678999999999999865 6889999998754332 356788999999996 999999999999888999999998
Q ss_pred CcCCccccccC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 143 PNGSLDRHVFP-KESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 143 ~~gsL~~~l~~-~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
.. ++.++... .......+++..+..++.+++.||+|||+. .+++||||||+||+++.++.++|+|||++.......
T Consensus 86 ~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 86 DI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred cC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence 53 55443211 112236689999999999999999999963 289999999999999999999999999987543322
Q ss_pred CceeeecccCCCCccccccccccc-CCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 222 DFVSISATRGTIGYIAPELISRNF-GTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
. .....|+..|+|||.+.+.. ..++.++||||+||++|+|++|+.||...... .. .......+......
T Consensus 163 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~-~~~~~~~~~~~~~~ 232 (288)
T cd06616 163 A---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSV------FD-QLTQVVKGDPPILS 232 (288)
T ss_pred c---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchH------HH-HHhhhcCCCCCcCC
Confidence 1 12335888999999986531 25788999999999999999999998644310 00 11111111111111
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...+..++..+.+|+.+||+.+|++|||++++++
T Consensus 233 --~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 233 --NSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred --CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1112345678999999999999999999999987
No 316
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3e-37 Score=273.29 Aligned_cols=247 Identities=28% Similarity=0.442 Sum_probs=200.3
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
|.+.+.||+|++|.||++... ++..+++|++..... ....+.+|+..++.++|+|++++++++..+...++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 456688999999999999976 688999999977654 457889999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|.+++... ...+++..+..++.|++.|+.+||+. +++|+||+|+||+++.++.++|+|||.+........
T Consensus 82 ~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 153 (253)
T cd05122 82 GSLKDLLKST---NQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-- 153 (253)
T ss_pred CcHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence 9999887432 25689999999999999999999998 999999999999999999999999999886654331
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
.....++..|+|||.+.+. ..+.++|+||||+++|+|++|..||....... ... ............
T Consensus 154 -~~~~~~~~~~~~PE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------~~~-~~~~~~~~~~~~--- 219 (253)
T cd05122 154 -RNTMVGTPYWMAPEVINGK--PYDYKADIWSLGITAIELAEGKPPYSELPPMK-------ALF-KIATNGPPGLRN--- 219 (253)
T ss_pred -ccceecCCcccCHHHHcCC--CCCccccHHHHHHHHHHHHhCCCCCCCCchHH-------HHH-HHHhcCCCCcCc---
Confidence 2234588899999998764 57889999999999999999999987543211 111 111111111111
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...++..+.+++.+||+.||++|||+.++++
T Consensus 220 -~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 220 -PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred -ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1123567999999999999999999999986
No 317
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.6e-37 Score=279.63 Aligned_cols=243 Identities=26% Similarity=0.349 Sum_probs=194.7
Q ss_pred hcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 70 THKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
.+.||+|++|.||++... +++.+++|.+..... ..+.+.+|+.+++.++|||++++++++......++++||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 478999999999999864 688999998865433 235678999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeee
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 227 (373)
.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+........ ...
T Consensus 104 ~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--~~~ 173 (285)
T cd06648 104 TDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--RRK 173 (285)
T ss_pred HHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCc--ccc
Confidence 988732 4588999999999999999999998 999999999999999999999999998765433221 112
Q ss_pred cccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhH
Q 048542 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIES 307 (373)
Q Consensus 228 ~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
...|+..|+|||.+.+. .++.++|+||||+++|+|++|..||...... ................ +.
T Consensus 174 ~~~~~~~y~aPE~~~~~--~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~----~~ 239 (285)
T cd06648 174 SLVGTPYWMAPEVISRL--PYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--------QAMKRIRDNLPPKLKN----LH 239 (285)
T ss_pred cccCCccccCHHHhcCC--CCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--------HHHHHHHhcCCCCCcc----cc
Confidence 34588999999998664 6788999999999999999999998653321 1111222221111111 12
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 308 MIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 308 ~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.++..+.+++.+||+.+|++|||++++++
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 240 KVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred cCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 24568999999999999999999999986
No 318
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=5.4e-38 Score=284.87 Aligned_cols=260 Identities=24% Similarity=0.319 Sum_probs=191.0
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
.|.+.+.||+|+||.||+|... +++.||+|.+...... ...+.+|+.+++.++|+||+++++++..+...++||||+
T Consensus 6 ~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07870 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYM 85 (291)
T ss_pred eeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEecc
Confidence 4667799999999999999865 6889999998754322 246778999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
. +++.+.+.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 86 ~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 158 (291)
T cd07870 86 H-TDLAQYMIQ---HPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ 158 (291)
T ss_pred c-CCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCCC
Confidence 5 677666532 224577888899999999999999998 999999999999999999999999999875432221
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHH---------HHHHHhc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSW---------VYDQLNK 293 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~---------~~~~~~~ 293 (373)
......++..|+|||.+.+. ..++.++||||||+++|+|++|..||........ .....+ .+.....
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07870 159 --TYSSEVVTLWYRPPDVLLGA-TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFE-QLEKIWTVLGVPTEDTWPGVSK 234 (291)
T ss_pred --CCCCccccccccCCceeecC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHH-HHHHHHHHcCCCChhhhhhhhh
Confidence 11233478899999988653 3467789999999999999999999975432100 000000 0000000
Q ss_pred --CCCccc---Cccchh---hH--HHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 --GGDLEL---QNVTEI---ES--MIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 --~~~~~~---~~~~~~---~~--~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...... ...... .. ..+..+.+++.+|++.||.+|||++|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 235 LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000 000000 00 11357889999999999999999999875
No 319
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.2e-37 Score=290.36 Aligned_cols=259 Identities=21% Similarity=0.218 Sum_probs=193.0
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeC------C
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEG------S 133 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------~ 133 (373)
...|+..+.||+|+||.||+|... +++.||+|.+..... ....+.+|+.+++.++||||+++++++... .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 456778899999999999999865 788999999865322 235677899999999999999999987543 3
Q ss_pred eeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccC
Q 048542 134 KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGL 213 (373)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~ 213 (373)
..++||||+. ++|.+.+. ..++...+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||+
T Consensus 95 ~~~lv~e~~~-~~l~~~~~------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 95 DVYLVMELMD-ANLCQVIQ------MDLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred cEEEEEeccC-CCHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCcc
Confidence 5799999995 47777662 2278889999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccc--------cchH
Q 048542 214 AKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKA--------YFPS 285 (373)
Q Consensus 214 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~--------~~~~ 285 (373)
+........ .....++..|+|||.+.+. .++.++|||||||++|+|++|+.||...+...... ....
T Consensus 165 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
T cd07850 165 ARTAGTSFM---MTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDE 239 (353)
T ss_pred ceeCCCCCC---CCCCcccccccCHHHHhCC--CCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 986543221 2234578899999998764 78889999999999999999999997543211000 0000
Q ss_pred -------HHHHHHhcCCCcc---c----------CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 286 -------WVYDQLNKGGDLE---L----------QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 286 -------~~~~~~~~~~~~~---~----------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
............. + ......+...+..+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 240 FMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000000000 0 00000112345678999999999999999999999863
No 320
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.3e-37 Score=275.17 Aligned_cols=249 Identities=27% Similarity=0.368 Sum_probs=201.7
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeC--CeeEEEEe
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEG--SKRALVYE 140 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~~~lv~e 140 (373)
|...+.||+|++|.||+|... ++..+++|.+..... ..+.+.+|+..+++++|+||+++++.+... ...++++|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 455688999999999999976 788999999876553 357788999999999999999999999888 88999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+++++|.+++.. ...+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 82 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 82 YVSGGSLSSLLKK----FGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred ecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 9999999988842 23789999999999999999999998 9999999999999999999999999998866544
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
..........++..|+|||.+.+. ..+.++||||||+++++|++|..||...... ............
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~----- 221 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRGE--EYGRAADIWSLGCTVIEMATGKPPWSELGNP------MAALYKIGSSGE----- 221 (260)
T ss_pred cccccccCCCCCccccCHhhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCch------HHHHHhccccCC-----
Confidence 321112345688899999998764 5788999999999999999999998765411 011111111011
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
....+...+..+.+++.+|++.+|++||++.++++
T Consensus 222 -~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 222 -PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred -CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 11223344678999999999999999999999986
No 321
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=5.8e-38 Score=282.68 Aligned_cols=243 Identities=26% Similarity=0.347 Sum_probs=191.6
Q ss_pred cCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 73 ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
||+|+||+||+|..+ +|+.+|+|.+..... ....+.+|+.+++.++||||+++++.+...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999865 688999999875332 234567899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeee
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 227 (373)
.+++.... ...+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+....... ...
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~ 152 (277)
T cd05577 81 KYHIYNVG--EPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KIK 152 (277)
T ss_pred HHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCC---ccc
Confidence 98884332 24689999999999999999999998 99999999999999999999999999987554321 122
Q ss_pred cccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhH
Q 048542 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIES 307 (373)
Q Consensus 228 ~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
...++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||......... ..+...... .....+.
T Consensus 153 ~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--------~~~~~~~~~---~~~~~~~ 219 (277)
T cd05577 153 GRAGTPGYMAPEVLQGE--VYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK--------EELKRRTLE---MAVEYPD 219 (277)
T ss_pred cccCCCCcCCHHHhcCC--CCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH--------HHHHhcccc---ccccCCc
Confidence 34578899999998764 5788999999999999999999999654432110 011111110 1112223
Q ss_pred HHHHHHHHHHHhhcCCCCCCCC-----CHHHHHH
Q 048542 308 MIARKLCMIGLWCIQVKAADRP-----SMTKVLE 336 (373)
Q Consensus 308 ~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~ 336 (373)
.++..+.+++.+||+.||.+|| ++.+++.
T Consensus 220 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 220 KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 4467889999999999999999 6666654
No 322
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.2e-37 Score=288.55 Aligned_cols=265 Identities=22% Similarity=0.281 Sum_probs=195.8
Q ss_pred HHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc---cCHHHHHHHHHHhccc-CCCceeeEeeEeee--CCee
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK---FSAEEFINEVSTIGRI-HHVNVVQLLGFCSE--GSKR 135 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~--~~~~ 135 (373)
....|.+.+.||+|+||.||+|... +++.+|+|.+.... .....+.+|+.+++.+ +||||+++++++.. ....
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3456788899999999999999876 67899999885432 2235577899999999 99999999998854 3468
Q ss_pred EEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcc
Q 048542 136 ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 215 (373)
++||||++ ++|..++.. ..+.+..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++.
T Consensus 85 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 85 YLVFEYME-TDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEecccc-cCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 99999996 588777621 2678888999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCCc---eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc-------hH
Q 048542 216 FHPKENDF---VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF-------PS 285 (373)
Q Consensus 216 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~-------~~ 285 (373)
........ .......|+..|+|||.+.+. ..++.++|+||||+++|+|++|+.||............ ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGS-TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSA 234 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeecc-ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 65433221 122234588899999987653 45778999999999999999999998654322110000 00
Q ss_pred H---------HHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 286 W---------VYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 286 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
. ....+.................++..+.+++.+||+.||++|||+.++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 235 EDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0 000000000000011111112256789999999999999999999999874
No 323
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.4e-37 Score=286.94 Aligned_cols=260 Identities=20% Similarity=0.305 Sum_probs=191.7
Q ss_pred cccCCC--CcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQG--GFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G--~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
..||+| +||+||++.+. +|+.||+|++...... .+.+.+|+.+++.++||||+++++++..+...++++||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 99999999865 7899999998765433 25678899999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
+++.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 84 GSANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 99998874432 23588899999999999999999998 99999999999999999999999998654322111100
Q ss_pred e-----eecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc--------------chH
Q 048542 225 S-----ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY--------------FPS 285 (373)
Q Consensus 225 ~-----~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~--------------~~~ 285 (373)
. .....++..|+|||.+.+....++.++||||+||++|+|++|..||........... .+.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 0 011234567999999876544678899999999999999999999975432110000 000
Q ss_pred HHHHHH-------hc---------C---CCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 286 WVYDQL-------NK---------G---GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 286 ~~~~~~-------~~---------~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
-.... .. . ..............++..+.+|+.+||+.||++|||++|+++
T Consensus 239 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 239 -EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred -hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 00000 00 0 000000011223456778999999999999999999999974
No 324
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-40 Score=323.10 Aligned_cols=248 Identities=27% Similarity=0.340 Sum_probs=200.8
Q ss_pred hcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 70 THKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
..+||.|.||.||.|... +|...|+|-++.... ....+.+|..++..++|||++++||+-.+.+..+|.||||++|
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence 367999999999999854 788899998764322 3366889999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc--
Q 048542 146 SLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF-- 223 (373)
Q Consensus 146 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-- 223 (373)
+|.+.+ ..++..++.....+..|++.|++|||+. |||||||||.||+++.+|.+|++|||.|.........
T Consensus 1320 sLa~ll----~~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1320 SLASLL----EHGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred cHHHHH----HhcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence 999988 3455566777778889999999999998 9999999999999999999999999999876544211
Q ss_pred eeeecccCCCCccccccccccc-CCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 224 VSISATRGTIGYIAPELISRNF-GTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~-~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
.......||+.|||||++.+.. ..-.-+.||||+||++.||.||++||...+..- .+.-.+..+..+.++
T Consensus 1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~-------aIMy~V~~gh~Pq~P-- 1463 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW-------AIMYHVAAGHKPQIP-- 1463 (1509)
T ss_pred HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh-------HHHhHHhccCCCCCc--
Confidence 1233556999999999997753 223457899999999999999999997655421 112233344444433
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
..++..-.+++.+||..||++|-++.|+++.
T Consensus 1464 ----~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1464 ----ERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred ----hhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 4478889999999999999999999888764
No 325
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6.4e-38 Score=289.98 Aligned_cols=263 Identities=18% Similarity=0.243 Sum_probs=195.9
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc---cCHHHHHHHHHHhcccCCCceeeEeeEeee----CCeeE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK---FSAEEFINEVSTIGRIHHVNVVQLLGFCSE----GSKRA 136 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~----~~~~~ 136 (373)
..|.+.+.||.|+||.||+|..+ ++..||+|.+.... .....+.+|+.+++.++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 45667789999999999999865 78999999987542 234667889999999999999999988753 35689
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
+||||+. ++|.+++. .+..+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++..
T Consensus 85 lv~e~~~-~~l~~~~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 85 VVMDLME-SDLHHIIH----SDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred EEEehhh-hhHHHHhc----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEeccccccee
Confidence 9999995 58887773 345589999999999999999999998 999999999999999999999999999875
Q ss_pred CCCCCCc--eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc-------ch---
Q 048542 217 HPKENDF--VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY-------FP--- 284 (373)
Q Consensus 217 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~-------~~--- 284 (373)
....... .......++..|+|||.+.+. ..++.++|||||||++|+|++|+.||........... .+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSL-PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhcCC-cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 4332211 111234688899999987653 3578899999999999999999999965432110000 00
Q ss_pred ------HHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 285 ------SWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 285 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.........................+..+.+++.+||+.+|++|||+++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0000000000000000011122335678999999999999999999999887
No 326
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.2e-37 Score=281.06 Aligned_cols=260 Identities=21% Similarity=0.276 Sum_probs=198.9
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|++.+.||.|++|.||+|..+ +++.+++|.+...... ...+.+|+.+++.++|+||+++++++..+...++++||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 355688999999999999865 7889999998765433 467888999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++ ++.+.+.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~-~l~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~- 152 (283)
T cd05118 81 DT-DLYKLIKD---RQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV- 152 (283)
T ss_pred CC-CHHHHHHh---hcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-
Confidence 65 77777633 235789999999999999999999998 99999999999999999999999999987664433
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc-------hHHHHHHHhc--
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF-------PSWVYDQLNK-- 293 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~-------~~~~~~~~~~-- 293 (373)
.......++..|+|||.+.+. ..++.++|+||+|+++|+|++|+.||............ ....+.....
T Consensus 153 -~~~~~~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 153 -RPYTHYVVTRWYRAPELLLGD-KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred -ccccCccCcccccCcHHHhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhh
Confidence 112234578889999998653 36788999999999999999999998654421100000 0000000000
Q ss_pred ------CCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 ------GGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 ------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...............++..+.+++.+||+.||.+||++++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000011112333456788999999999999999999999986
No 327
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=297.98 Aligned_cols=259 Identities=25% Similarity=0.388 Sum_probs=199.0
Q ss_pred hcccCCCCcEEEEEEEEc-CCceeEEEEeccC--ccCHHHHHHHHHHhcccCCCceeeEeeEeeeCC------eeEEEEe
Q 048542 70 THKLGQGGFGSVYKGQLQ-TGGLIAVKMLENS--KFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS------KRALVYE 140 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~------~~~lv~e 140 (373)
.+.||+|+||.||+|+++ +|+.||||.++.. ....+.+.+|++++++++|+|||+++++-++.. ...++||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 467999999999999955 8999999998863 445688999999999999999999998765543 4679999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeee--CCC--ceEEeeccCccc
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD--HNF--IPKVSDFGLAKF 216 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~--~~~--~~kl~Dfg~~~~ 216 (373)
||.+|||...+...++ ...+++.+++.+..+++.||.|||++ +|+||||||.||++- .+| ..||+|||.|+-
T Consensus 98 yC~gGsL~~~L~~PEN-~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are 173 (732)
T KOG4250|consen 98 YCSGGSLRKVLNSPEN-AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE 173 (732)
T ss_pred ecCCCcHHHHhcCccc-ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence 9999999999987765 45699999999999999999999998 999999999999984 223 579999999997
Q ss_pred CCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcC--
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKG-- 294 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 294 (373)
..+.. .+....||..|++||.+..+ +.|+..+|.|||||++|+..||..||........... -.| ....+.
T Consensus 174 l~d~s---~~~S~vGT~~YLhPel~E~q-~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~-~~~--~~~tkkp~ 246 (732)
T KOG4250|consen 174 LDDNS---LFTSLVGTEEYLHPELYERQ-KKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKE-IMW--HIITKKPS 246 (732)
T ss_pred CCCCC---eeeeecCchhhcChHHHhhc-cCcCceeehhhhhhHHHHHhccCCCCCcCCCccccch-hhh--hhhccCCC
Confidence 76554 45667899999999999853 4788899999999999999999999986655432111 111 111110
Q ss_pred ---------CC------cccCccchhhHHHHHHHHHHHHhhcCCCCCCCC--CHHHHHHHHh
Q 048542 295 ---------GD------LELQNVTEIESMIARKLCMIGLWCIQVKAADRP--SMTKVLEMLE 339 (373)
Q Consensus 295 ---------~~------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp--s~~ell~~L~ 339 (373)
.. ..++......+.....+.+.+..+|..+|++|- .+.+....+.
T Consensus 247 ~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~ 308 (732)
T KOG4250|consen 247 GVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVD 308 (732)
T ss_pred ceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHH
Confidence 00 011112223344455677778888888888887 5444444333
No 328
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.5e-38 Score=288.59 Aligned_cols=262 Identities=21% Similarity=0.293 Sum_probs=193.6
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeC--CeeEEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEG--SKRALV 138 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~~~lv 138 (373)
..|++.+.||+|+||.||+|..+ +|+.||+|.++..... .....+|+.+++.++|+||+++++++... ...++|
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLV 86 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEE
Confidence 35677899999999999999875 6899999998754322 23456899999999999999999998654 568999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
|||+.+ +|.+++... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus 87 ~e~~~~-~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 87 MEYCEQ-DLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EecCCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 999964 777776432 35689999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchH-------HHHHHH
Q 048542 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPS-------WVYDQL 291 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~-------~~~~~~ 291 (373)
.... ......++..|+|||.+.+. ..++.++||||+||++|+|++|..||...........+.. ..+...
T Consensus 160 ~~~~--~~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 160 LPAK--PMTPKVVTLWYRAPELLLGC-TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred CccC--CCCcccccccccChhhhcCC-CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhh
Confidence 3321 12233457789999988653 3578899999999999999999999975432210000000 000000
Q ss_pred hcC---CCccc-----CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 292 NKG---GDLEL-----QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 292 ~~~---~~~~~-----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
... ..... ..........+..+.+++.+||+.||++|||++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000 00000 0000111224677899999999999999999999986
No 329
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=6.9e-37 Score=281.03 Aligned_cols=249 Identities=26% Similarity=0.340 Sum_probs=195.5
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC----HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS----AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|...+.||+|+||.||++... ++..+|+|.+...... ...+.+|+.+++.++|||++++++++.++...++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3556788999999999999865 6889999998654221 2468889999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|+.+ ++.+.+.. ...++++..+..++.+++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 106 ~~~g-~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 106 YCLG-SASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred CCCC-CHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 9964 77666532 245689999999999999999999998 9999999999999999999999999988754322
Q ss_pred CCceeeecccCCCCccccccccc-ccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 221 NDFVSISATRGTIGYIAPELISR-NFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
....++..|+|||.+.. ..+.++.++|||||||++|+|++|..||....... ... ..........
T Consensus 179 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-------~~~-~~~~~~~~~~ 244 (317)
T cd06635 179 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALY-HIAQNESPTL 244 (317)
T ss_pred ------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-------HHH-HHHhccCCCC
Confidence 23458889999998742 12467889999999999999999999986542211 111 1111111111
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
. ...++..+.+++.+||+.+|.+||++.++++.+--
T Consensus 245 ~-----~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 245 Q-----SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred C-----CccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 1 12345678999999999999999999999986543
No 330
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.7e-37 Score=280.71 Aligned_cols=255 Identities=22% Similarity=0.311 Sum_probs=193.3
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
.|++.+.||+|++|.||+|..+ +++.||+|.+..... ..+.+.+|+.+++.++||||+++++++.+....++||||
T Consensus 3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (294)
T PLN00009 3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEY 82 (294)
T ss_pred ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEec
Confidence 4667789999999999999876 688999999865432 235678999999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC-CCceEEeeccCcccCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH-NFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~-~~~~kl~Dfg~~~~~~~~ 220 (373)
++ ++|.+.+... ....+++..+..++.|++.||+|||++ +++|+||+|+||+++. ++.+||+|||++......
T Consensus 83 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 83 LD-LDLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred cc-ccHHHHHHhC--CCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 95 5777666322 223467888889999999999999998 9999999999999985 567999999999754332
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhc---C---
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK---G--- 294 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~--- 294 (373)
.. ......++..|+|||.+.+. ..++.++||||+|+++|+|++|..||....... ........ .
T Consensus 157 ~~--~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-------~~~~~~~~~~~~~~~ 226 (294)
T PLN00009 157 VR--TFTHEVVTLWYRAPEILLGS-RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-------ELFKIFRILGTPNEE 226 (294)
T ss_pred cc--ccccCceeecccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHHHhCCCChh
Confidence 11 12233578899999988653 357889999999999999999999997543211 01110000 0
Q ss_pred ---------------CCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 295 ---------------GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 295 ---------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..............++..+.+++.+||+.+|++||+++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 227 TWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000001112234667899999999999999999999986
No 331
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-38 Score=268.35 Aligned_cols=261 Identities=24% Similarity=0.331 Sum_probs=206.6
Q ss_pred Hhhhh-cccCCCCcEEEEEEE-EcCCceeEEEEeccCccC-HHHHHHHHHHhcccC-CCceeeEeeEeeeCCeeEEEEec
Q 048542 66 TNHFT-HKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFS-AEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 66 ~~~~~-~~ig~G~~g~V~~~~-~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
-|++. +.||+|+++.|-.+. ..+|..||||++.+...- ..+..+|++++...+ |+||+.++++|+++...|+|||.
T Consensus 78 ~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEK 157 (463)
T KOG0607|consen 78 MYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEK 157 (463)
T ss_pred HHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEec
Confidence 45554 679999999999997 668999999999876543 467899999999995 99999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC---ceEEeeccCcccCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF---IPKVSDFGLAKFHP 218 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~---~~kl~Dfg~~~~~~ 218 (373)
|.||+|...+ .+...+++.++.++..+|+.||.+||.+ ||.|||+||+|||..... -+||+||.+..-..
T Consensus 158 m~GGplLshI----~~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k 230 (463)
T KOG0607|consen 158 MRGGPLLSHI----QKRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIK 230 (463)
T ss_pred ccCchHHHHH----HHhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccc
Confidence 9999998888 3456799999999999999999999998 999999999999996544 47999998876432
Q ss_pred CCCC-----ceeeecccCCCCccccccc---ccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCc-------cccccc
Q 048542 219 KEND-----FVSISATRGTIGYIAPELI---SRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATR-------SSKAYF 283 (373)
Q Consensus 219 ~~~~-----~~~~~~~~gt~~y~aPE~~---~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~-------~~~~~~ 283 (373)
.... .......+|+..|||||+. .++...|+.++|.||||+++|-||+|.+||.+.-.. +.-...
T Consensus 231 ~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~C 310 (463)
T KOG0607|consen 231 LNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVC 310 (463)
T ss_pred cCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHH
Confidence 2221 1123456789999999975 334456888999999999999999999999653221 111223
Q ss_pred hHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 284 PSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...+++.+..+. .++++ .-...++....+|+...+..|+.+|.++.+++.
T Consensus 311 Q~~LFesIQEGk-YeFPd--kdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 311 QNKLFESIQEGK-YEFPD--KDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HHHHHHHHhccC-CcCCh--hhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 334444444443 23332 333578889999999999999999999999887
No 332
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=9.9e-38 Score=277.71 Aligned_cols=247 Identities=26% Similarity=0.398 Sum_probs=197.2
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc---cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK---FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|.+.+.||+|+||.||+|..+ +|..+|+|.+.... ...+.+.+|+.+++.++|+||+++++.+......++++||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence 566789999999999999876 67889999986542 23467789999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC-ceEEeeccCcccCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF-IPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~-~~kl~Dfg~~~~~~~~~ 221 (373)
++++|.+++... .+..+++..+..++.|++.||.|||+. +++|+||||+||+++.++ .++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 82 DGGDLMKRINRQ--RGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 999999888432 234578999999999999999999998 999999999999998875 46999999987654332
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
.. .....|++.|+|||...+. .++.++|+||||+++|+|++|..||...... ....... .....
T Consensus 157 ~~--~~~~~~~~~~~ape~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~-~~~~~---- 220 (257)
T cd08225 157 EL--AYTCVGTPYYLSPEICQNR--PYNNKTDIWSLGCVLYELCTLKHPFEGNNLH-------QLVLKIC-QGYFA---- 220 (257)
T ss_pred cc--ccccCCCccccCHHHHcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCccHH-------HHHHHHh-cccCC----
Confidence 21 1234588899999988654 6788999999999999999999998643321 1121111 11111
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.....++..+.+++.+||+.+|++|||+.++++
T Consensus 221 --~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 221 --PISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 111234567999999999999999999999986
No 333
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.9e-37 Score=283.62 Aligned_cols=263 Identities=22% Similarity=0.289 Sum_probs=190.4
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCC--------
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGS-------- 133 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-------- 133 (373)
.|++.+.||+|+||.||+|..+ +++.||+|.+..... ....+.+|+.+++.++||||+++++++....
T Consensus 13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 92 (310)
T cd07865 13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKG 92 (310)
T ss_pred heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCc
Confidence 5778899999999999999865 688999998864322 2245678999999999999999999986544
Q ss_pred eeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccC
Q 048542 134 KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGL 213 (373)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~ 213 (373)
..++||||+. ++|.+.+.. ....+++..+..++.|+++||+|||++ +++|+||||+||+++.++.+||+|||+
T Consensus 93 ~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 93 SFYLVFEFCE-HDLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred eEEEEEcCCC-cCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCC
Confidence 4599999996 477766632 234689999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCc--eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc-------h
Q 048542 214 AKFHPKENDF--VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF-------P 284 (373)
Q Consensus 214 ~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~-------~ 284 (373)
+......... .......++..|+|||.+.+. ..++.++|+||||+++|+|++|..||...........+ +
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGE-RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCC-cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9765432211 112234577889999987653 34678999999999999999999998654321100000 0
Q ss_pred HHHHHHH---hcCCCcccCcc--chhhH-----HHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 285 SWVYDQL---NKGGDLELQNV--TEIES-----MIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 285 ~~~~~~~---~~~~~~~~~~~--~~~~~-----~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...+... ........+.. ..... ..+..+.+++.+||+.||.+|||++++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000000 00000000000 00000 11346789999999999999999999985
No 334
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-39 Score=302.37 Aligned_cols=256 Identities=27% Similarity=0.419 Sum_probs=213.8
Q ss_pred hhhcccCCCCcEEEEEEEEc-CCc----eeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 68 HFTHKLGQGGFGSVYKGQLQ-TGG----LIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~~-~~~----~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
+-.++||+|+||+||+|.+- .|+ +||||++...... ..++++|+..|.++.|||+++++++|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 34478999999999999854 343 6899988765433 578999999999999999999999997655 789999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
||+.|+|.+++.. .+..+..+..+.|..|||+||.|||.+ .++||||-.+|+|+..-..+|+.|||+++....+
T Consensus 778 ~mP~G~LlDyvr~---hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 778 LMPLGCLLDYVRE---HRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred hcccchHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 9999999999954 346688899999999999999999998 9999999999999999999999999999988776
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
..........-.+.|+|-|.+... .++.++||||||+.+||++| |..|+...... .+.+.++.+.++.
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~--~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~--------eI~dlle~geRLs- 920 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIR--KYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE--------EIPDLLEKGERLS- 920 (1177)
T ss_pred cccccccccccCcHHHHHHHhhcc--CCCchhhhhhhhhhHHHHHhcCCCccCCCCHH--------HhhHHHhccccCC-
Confidence 655555555667889999998764 89999999999999999997 88888765543 2445555555433
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCCCCC
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDDLQ 346 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~~~~ 346 (373)
.|+..+.++..++.+||..|++.||+++++...+.+...+..
T Consensus 921 -----qPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 921 -----QPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred -----CCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 234566789999999999999999999999999998766553
No 335
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3e-37 Score=283.07 Aligned_cols=262 Identities=17% Similarity=0.177 Sum_probs=192.8
Q ss_pred hhcccCCCCcEEEEEEEEcCCceeEEEEeccCc---cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSK---FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 69 ~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
+.+.+|.|+++.++++.. ++..||+|++.... ...+.+.+|+.+++.++|+||+++++++.+....+++|||++++
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 445566666666666554 68999999987542 23467899999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc--
Q 048542 146 SLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF-- 223 (373)
Q Consensus 146 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-- 223 (373)
+|.+++.... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.+.........
T Consensus 85 ~l~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 85 SCEDLLKTHF--PEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 9998885332 34588899999999999999999998 9999999999999999999999999988654322111
Q ss_pred ---eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccc-----cchHH----HHHHH
Q 048542 224 ---VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKA-----YFPSW----VYDQL 291 (373)
Q Consensus 224 ---~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~-----~~~~~----~~~~~ 291 (373)
.......++..|+|||.+.+....++.++|+||+||++|+|++|..||.......... ..+.+ .....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 0112334777899999987643457889999999999999999999997543211000 00000 00000
Q ss_pred hcCC----------CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 292 NKGG----------DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 292 ~~~~----------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.... .............++..+.+++.+||+.||++|||++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 0000 00001112233456778999999999999999999999986
No 336
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=273.23 Aligned_cols=238 Identities=24% Similarity=0.314 Sum_probs=198.3
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
+.+.+.||+|.||+|.+++.+ +++.||+|++++.-. ....-+.|-++|+..+||.+..+...|...+++|+||||
T Consensus 170 FdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMey 249 (516)
T KOG0690|consen 170 FDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEY 249 (516)
T ss_pred hhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEE
Confidence 467799999999999999866 789999999987533 224456789999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
..||.|.-.+ ++...+++....-+...|+.||.|||++ +||.||+|.+|.++|.+|++||+|||+++---...
T Consensus 250 anGGeLf~HL----srer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g 322 (516)
T KOG0690|consen 250 ANGGELFFHL----SRERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYG 322 (516)
T ss_pred ccCceEeeeh----hhhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhccccc
Confidence 9999998777 3456688888888999999999999998 99999999999999999999999999997422211
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
..+...+|||.|+|||++... .|+.++|+|.+|+++|||++|+.||...+... .++.+. ..
T Consensus 323 --~t~kTFCGTPEYLAPEVleDn--DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k--------LFeLIl-------~e 383 (516)
T KOG0690|consen 323 --DTTKTFCGTPEYLAPEVLEDN--DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK--------LFELIL-------ME 383 (516)
T ss_pred --ceeccccCChhhcCchhhccc--cccceeehhhhhHHHHHHHhccCcccccchhH--------HHHHHH-------hh
Confidence 235678999999999999875 88999999999999999999999998766532 111111 11
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPS 330 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps 330 (373)
....|+.++++.+.|+...|..||.+|..
T Consensus 384 d~kFPr~ls~eAktLLsGLL~kdP~kRLG 412 (516)
T KOG0690|consen 384 DLKFPRTLSPEAKTLLSGLLKKDPKKRLG 412 (516)
T ss_pred hccCCccCCHHHHHHHHHHhhcChHhhcC
Confidence 12345667788999999999999999973
No 337
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-39 Score=296.27 Aligned_cols=251 Identities=24% Similarity=0.342 Sum_probs=199.9
Q ss_pred HhhhhcccCCCCcEEEEEEEEcC-CceeEEEEeccCc-cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQT-GGLIAVKMLENSK-FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~~-~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
..++...||.|+||+||+|..+. +-..|-|++.... ...++++-|+++|..+.||+|+++++.|..++.++++.|||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 34667889999999999998773 4456778776543 344889999999999999999999999988899999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
||-.+..+. .-+..+.+..+..+++|++.||.|||++ +|+|||||+.|||++-+|.++|+|||.+.......
T Consensus 113 GGAVDaiml---EL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~-- 184 (1187)
T KOG0579|consen 113 GGAVDAIML---ELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR-- 184 (1187)
T ss_pred CchHhHHHH---HhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHH--
Confidence 999887763 3367899999999999999999999999 99999999999999999999999999986433211
Q ss_pred eeeecccCCCCcccccccccc---cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 224 VSISATRGTIGYIAPELISRN---FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~---~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
..-....|||.|||||+.... ...|+.++||||||+.|.+|..+.+|-..-. ++-+.-.+.+...+.
T Consensus 185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln--------pMRVllKiaKSePPT-- 254 (1187)
T KOG0579|consen 185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN--------PMRVLLKIAKSEPPT-- 254 (1187)
T ss_pred hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc--------hHHHHHHHhhcCCCc--
Confidence 122456799999999987543 3478899999999999999999988754222 111221222211111
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.-.|...+..+.+++.+||..||+.||++.++++
T Consensus 255 --LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 255 --LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred --ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 1223566788999999999999999999999876
No 338
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=9.5e-38 Score=284.71 Aligned_cols=262 Identities=22% Similarity=0.270 Sum_probs=194.8
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc---cCHHHHHHHHHHhcccCCCceeeEeeEeeeCC----
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK---FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS---- 133 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~---- 133 (373)
.....|++.+.||+|+||.||+|..+ +++.||+|.++... .....+.+|+.+++.++|||++++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34557788899999999999999976 67899999987543 22356778999999999999999999886654
Q ss_pred ------eeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceE
Q 048542 134 ------KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPK 207 (373)
Q Consensus 134 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~k 207 (373)
..++++||+++ ++...+.. ....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLES---GLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 78999999976 66665532 234689999999999999999999998 999999999999999999999
Q ss_pred EeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHH
Q 048542 208 VSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWV 287 (373)
Q Consensus 208 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~ 287 (373)
|+|||++........ .......++..|+|||.+.+. ..++.++||||+||++|+|++|+.||........... +
T Consensus 157 l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~-~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~----~ 230 (302)
T cd07864 157 LADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGE-ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLEL----I 230 (302)
T ss_pred eCcccccccccCCcc-cccccceeccCccChHHhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH----H
Confidence 999999886543321 112223467789999987543 3467899999999999999999999875432110000 0
Q ss_pred HHHHhcCCC---ccc----------------CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 288 YDQLNKGGD---LEL----------------QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 288 ~~~~~~~~~---~~~----------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
......... ... .........++..+.+++.+||+.||.+|||++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 231 SRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000000000 000 0000011124568899999999999999999999875
No 339
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.9e-37 Score=276.53 Aligned_cols=243 Identities=24% Similarity=0.275 Sum_probs=188.4
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCccCH----HHHHHHHHH-hcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSA----EEFINEVST-IGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~----~~~~~e~~~-l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.||.|+||.||+|... +++.||+|.+....... ..+..|... ....+|+|++++++++..+...++++||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56899999999999865 68899999987543221 233444443 3445899999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
++|.+++. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 82 ~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 150 (260)
T cd05611 82 GDCASLIK----TLGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN---- 150 (260)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceecccc----
Confidence 99998883 235688999999999999999999998 9999999999999999999999999988754321
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
....++..|+|||.+.+. .++.++||||+|+++|+|++|..||...... ........+... . ...
T Consensus 151 --~~~~~~~~y~~pe~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~-~--~~~ 215 (260)
T cd05611 151 --KKFVGTPDYLAPETILGV--GDDKMSDWWSLGCVIFEFLFGYPPFHAETPD--------AVFDNILSRRIN-W--PEE 215 (260)
T ss_pred --ccCCCCcCccChhhhcCC--CCcchhhhHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhcccC-C--CCc
Confidence 233578899999998765 5788999999999999999999999644321 122222221111 1 111
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
....++..+.+++.+||+.+|++||++.++.+.|+
T Consensus 216 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 216 VKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred ccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 12245678999999999999999998876666554
No 340
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.4e-37 Score=279.00 Aligned_cols=242 Identities=27% Similarity=0.366 Sum_probs=193.3
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCcc
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLD 148 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~ 148 (373)
.+||+|+||.||++..+ ++..+|+|.+..... ....+.+|+.+++.++|+|++++++.+..++..+++|||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 67999999999999875 788999998865433 3356889999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeec
Q 048542 149 RHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 228 (373)
Q Consensus 149 ~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 228 (373)
+++. ...+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++........ ....
T Consensus 106 ~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~~~ 175 (292)
T cd06657 106 DIVT-----HTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKS 175 (292)
T ss_pred HHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccc--cccc
Confidence 8762 23578999999999999999999998 999999999999999999999999998875433221 1223
Q ss_pred ccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHH
Q 048542 229 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESM 308 (373)
Q Consensus 229 ~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (373)
..++..|+|||.+.+. .++.++|+||+|+++|+|++|..||....... ................ ..
T Consensus 176 ~~~~~~y~~pE~~~~~--~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~--------~~~~~~~~~~~~~~~~----~~ 241 (292)
T cd06657 176 LVGTPYWMAPELISRL--PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--------AMKMIRDNLPPKLKNL----HK 241 (292)
T ss_pred cccCccccCHHHhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhhCCcccCCc----cc
Confidence 4588899999988653 67889999999999999999999986433211 1111211111111111 12
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 309 IARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 309 ~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
++..+.+++.+||+.+|.+||++.++++
T Consensus 242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred CCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 3557889999999999999999999987
No 341
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.6e-37 Score=277.33 Aligned_cols=245 Identities=24% Similarity=0.327 Sum_probs=195.2
Q ss_pred cCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 73 ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
||.|+||.||++... +|+.+++|.+..... ..+.+.+|+.+++.++||||+++++.+..+...++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 589999999876543 236788899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC-----
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND----- 222 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----- 222 (373)
.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~----~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLEN----VGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 888832 23689999999999999999999998 999999999999999999999999999875433211
Q ss_pred -ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 223 -FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 223 -~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
........++..|+|||...+. ..+.++|+||||+++|+|++|..||...... ........+. ...+.
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~--~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~-~~~~~ 222 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQ--GHSKTVDWWSLGCILYEFLVGIPPFHGETPE--------EIFQNILNGK-IEWPE 222 (265)
T ss_pred ccccccCcccCccccCHHHhcCC--CCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCC-cCCCc
Confidence 1122334578899999998764 5788999999999999999999998754421 1122222211 11111
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
.. .++..+.+++.+||+.+|++|||+.++.+.|+
T Consensus 223 ~~----~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 223 DV----EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred cc----cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 11 13567899999999999999999966666665
No 342
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-38 Score=306.98 Aligned_cols=274 Identities=22% Similarity=0.218 Sum_probs=214.6
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc----cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEE
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK----FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 138 (373)
...|.+.+.||+|+||.|..++.+ +++.||+|++.+.. .....|..|-.+|..-+.+-|+.++..|.++.++|+|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence 556788899999999999999976 78899999998733 3346688888899888899999999999999999999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
||||+||+|-.++. +-.++++..+.-++..|+-||.-+|+. |+|||||||+|||+|..|++||+|||.|-.+.
T Consensus 154 MdY~pGGDlltLlS----k~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm~ 226 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLS----KFDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD 226 (1317)
T ss_pred EecccCchHHHHHh----hcCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhcC
Confidence 99999999999883 233799999999999999999999998 99999999999999999999999999998776
Q ss_pred CCCCceeeecccCCCCcccccccccc---cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 219 KENDFVSISATRGTIGYIAPELISRN---FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
.++ ...+...+|||.|.+||+++.. .+.|+..+|+||+|+++|||+.|..||.....- .-.-..+....
T Consensus 227 ~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslv-------eTY~KIm~hk~ 298 (1317)
T KOG0612|consen 227 ADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLV-------ETYGKIMNHKE 298 (1317)
T ss_pred CCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHH-------HHHHHHhchhh
Confidence 544 3456778899999999998542 267899999999999999999999999855421 11112222223
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCC---HHHHHH--HHhcCCC----CCCCCCCCccccCC
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPS---MTKVLE--MLEGSID----DLQMPPRPFFSSSR 357 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~ell~--~L~~~~~----~~~~~~~p~~~~~~ 357 (373)
.+.++.. ..+|..+++||++.+. +|+.|.. ++++-. +++++-+ +..+|-.|...++.
T Consensus 299 ~l~FP~~----~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vPevssd~ 364 (1317)
T KOG0612|consen 299 SLSFPDE----TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVPEVSSDD 364 (1317)
T ss_pred hcCCCcc----cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCCcCCCCC
Confidence 3334422 2367788999988775 6778887 887754 2333322 33445555554443
No 343
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2e-37 Score=281.03 Aligned_cols=251 Identities=22% Similarity=0.268 Sum_probs=195.2
Q ss_pred hhhhcccCCCCcEEEEEEEE----cCCceeEEEEeccCc-----cCHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeE
Q 048542 67 NHFTHKLGQGGFGSVYKGQL----QTGGLIAVKMLENSK-----FSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~----~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~ 136 (373)
|++.+.||+|+||.||++.. .+|..||+|++.... ...+.+.+|+.+++.+ +|+||+++++.+..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 56678999999999999985 368899999987532 2235678899999999 5899999999999989999
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
+||||+++++|.+++. ....+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||++..
T Consensus 82 lv~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 82 LILDYINGGELFTHLS----QRERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 9999999999998883 235688999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCC
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGD 296 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
....... ......|+..|+|||.+.+....++.++||||||+++|+|++|..||........ ... .........
T Consensus 155 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~---~~~-~~~~~~~~~- 228 (290)
T cd05613 155 FHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS---QAE-ISRRILKSE- 228 (290)
T ss_pred ccccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc---HHH-HHHHhhccC-
Confidence 5332211 1123458889999999865434567889999999999999999999864322111 111 111111111
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCCCC-----CHHHHHH
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAADRP-----SMTKVLE 336 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~ 336 (373)
. ..+..++..+.+++.+||+.||++|| +++++++
T Consensus 229 ~------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 P------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred C------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 1 11233456789999999999999997 6777765
No 344
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.6e-37 Score=277.64 Aligned_cols=241 Identities=24% Similarity=0.334 Sum_probs=186.6
Q ss_pred ccCCCCcEEEEEEEEc-CCceeEEEEeccCccC----HHHHHHHHH---HhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 72 KLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS----AEEFINEVS---TIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 72 ~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~---~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
.||+|+||.||++... +++.||+|.+...... ...+.+|.. .+....||||+.+++.+......++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999865 6889999998764322 122334433 3444579999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+++|.+++. ....+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 g~~L~~~l~----~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~-- 151 (278)
T cd05606 81 GGDLHYHLS----QHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (278)
T ss_pred CCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--
Confidence 999988773 345699999999999999999999998 99999999999999999999999999987543222
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
.....|+..|+|||.+.+. ..++.++|+||+|+++|+|++|+.||......... ... ........
T Consensus 152 --~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~-----~~~-~~~~~~~~------ 216 (278)
T cd05606 152 --PHASVGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-----EID-RMTLTMAV------ 216 (278)
T ss_pred --CcCcCCCcCCcCcHHhcCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH-----HHH-HHhhccCC------
Confidence 1234689999999998643 25788999999999999999999999765322110 011 11111111
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCC-----CHHHHHH
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRP-----SMTKVLE 336 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~ell~ 336 (373)
..+..++..+.+++.+||+.+|.+|| ++.++++
T Consensus 217 ~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 217 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 12223467899999999999999999 9999985
No 345
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=5.5e-37 Score=280.58 Aligned_cols=248 Identities=26% Similarity=0.345 Sum_probs=194.3
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
.+|...+.||+|+||.||+|... ++..+|+|.+..... ...++.+|+.+++.++|+|++++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34666788999999999999965 678899998864322 2356788999999999999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
||+. |++.+.+.. .+..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~-~~l~~~~~~---~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 95 EYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred EccC-CCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 9996 577666532 234588999999999999999999998 999999999999999999999999999875433
Q ss_pred CCCceeeecccCCCCccccccccc-ccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 220 ENDFVSISATRGTIGYIAPELISR-NFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
. ....++..|+|||.+.+ ..+.++.++|||||||++|+|++|..||....... ... ....+....
T Consensus 168 ~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-------~~~-~~~~~~~~~ 233 (308)
T cd06634 168 A------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALY-HIAQNESPA 233 (308)
T ss_pred c------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-------HHH-HHhhcCCCC
Confidence 2 23357889999998753 12357789999999999999999999986533211 111 111111111
Q ss_pred cCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 048542 299 LQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEML 338 (373)
Q Consensus 299 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L 338 (373)
.. ...++..+.+++.+||+.+|++||+++++++.-
T Consensus 234 ~~-----~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 234 LQ-----SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred cC-----cccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 11 123466789999999999999999999999753
No 346
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1e-36 Score=273.13 Aligned_cols=240 Identities=19% Similarity=0.262 Sum_probs=185.5
Q ss_pred hhhhcc--cCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHK--LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~--ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
+.+.+. ||+|+||.||++..+ ++..+|+|.+........ |......+ +|||++++++.+..++..++||||+
T Consensus 16 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~ 91 (267)
T PHA03390 16 CEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYI 91 (267)
T ss_pred hccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcC
Confidence 344455 499999999999865 788899999876433221 22222222 6999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC-ceEEeeccCcccCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF-IPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~-~~kl~Dfg~~~~~~~~~ 221 (373)
++++|.+++. .+..+++..+..++.|+++||.|||+. +++||||||+||+++.++ .++|+|||++.......
T Consensus 92 ~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~ 164 (267)
T PHA03390 92 KDGDLFDLLK----KEGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS 164 (267)
T ss_pred CCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc
Confidence 9999999883 234789999999999999999999998 999999999999999888 99999999987654322
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
...++..|+|||.+.+. .++.++||||+|+++|+|++|..||........ ....+. ......
T Consensus 165 ------~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~--~~~~~~-----~~~~~~--- 226 (267)
T PHA03390 165 ------CYDGTLDYFSPEKIKGH--NYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL--DLESLL-----KRQQKK--- 226 (267)
T ss_pred ------cCCCCCcccChhhhcCC--CCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh--hHHHHH-----Hhhccc---
Confidence 23588999999998764 678899999999999999999999974432210 011111 111111
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCC-HHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPS-MTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~ell~ 336 (373)
......++..+.+++.+||+.+|.+||+ ++++++
T Consensus 227 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 227 -LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred -CCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 1122346678999999999999999996 688874
No 347
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.8e-37 Score=285.90 Aligned_cols=255 Identities=22% Similarity=0.298 Sum_probs=193.0
Q ss_pred hhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCH---------------HHHHHHHHHhcccCCCceeeEeeEeeeC
Q 048542 69 FTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSA---------------EEFINEVSTIGRIHHVNVVQLLGFCSEG 132 (373)
Q Consensus 69 ~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~---------------~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 132 (373)
+.+.||.|+||.||+|..+ +++.||+|.+....... ..+.+|+.+++.++|+||+++++++..+
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 4477999999999999865 68899999986543221 2467899999999999999999999999
Q ss_pred CeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeecc
Q 048542 133 SKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFG 212 (373)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg 212 (373)
...+++|||+. ++|.+++. ....+++.....++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||
T Consensus 93 ~~~~lv~e~~~-~~l~~~l~----~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 93 DFINLVMDIMA-SDLKKVVD----RKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred CcEEEEEeccc-cCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCcc
Confidence 99999999996 58888773 345688999999999999999999998 99999999999999999999999999
Q ss_pred CcccCCCCC------------CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccc
Q 048542 213 LAKFHPKEN------------DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSK 280 (373)
Q Consensus 213 ~~~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~ 280 (373)
++....... .........++..|+|||.+.+. ..++.++|+||+||++|+|++|..||........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~- 242 (335)
T PTZ00024 165 LARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA-EKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQ- 242 (335)
T ss_pred ceeecccccccccccccccccccccccccccccCCCCChhcccC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence 987654110 00111233467889999998653 3468899999999999999999999975543210
Q ss_pred ccchHHHHHHHhcCCCc-----------------ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 281 AYFPSWVYDQLNKGGDL-----------------ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 281 ~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
...+.......... ............+..+.+++.+||+.+|++|||+++++.
T Consensus 243 ---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 243 ---LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred ---HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 00011111000000 000011111234567899999999999999999999987
No 348
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=6.7e-37 Score=271.69 Aligned_cols=245 Identities=24% Similarity=0.373 Sum_probs=199.7
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|.+.+.||+|++|.||++... +++.|++|.+..... ..+.+.+|++++..++|+|++++++++.+....+++|||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 566789999999999999866 678999999987654 3467889999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
++++|.+++.. ...+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+........
T Consensus 82 ~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 82 ENGSLRQIIKK----FGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCcHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 99999988832 35689999999999999999999998 999999999999999999999999999986654332
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
. .....++..|+|||...+. ..+.++|+||+|+++|+|++|..||...... ...... ......
T Consensus 155 ~--~~~~~~~~~y~~pe~~~~~--~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~-------~~~~~~-~~~~~~----- 217 (254)
T cd06627 155 D--DASVVGTPYWMAPEVIEMS--GASTASDIWSLGCTVIELLTGNPPYYDLNPM-------AALFRI-VQDDHP----- 217 (254)
T ss_pred c--ccccccchhhcCHhhhcCC--CCCcchhHHHHHHHHHHHHhCCCCCCCccHH-------HHHHHH-hccCCC-----
Confidence 1 2234588899999998664 4788999999999999999999998643311 011111 111111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..+..++..+.+++.+||+.+|++|||+.+++.
T Consensus 218 -~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 218 -PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 112234568899999999999999999999985
No 349
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-38 Score=281.48 Aligned_cols=243 Identities=25% Similarity=0.370 Sum_probs=202.1
Q ss_pred hhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC----HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 69 FTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS----AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 69 ~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
.-+.||+|+||.||-+..+ +|..||+|.+.+.... ....++|-.++.+++.+.||.+-..|+..+.+|+|+..|.
T Consensus 189 ~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMN 268 (591)
T KOG0986|consen 189 VYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMN 268 (591)
T ss_pred eeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeec
Confidence 3478999999999999855 8999999988764332 2456789999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
||+|.-.+.+..+ ..+++..+.-++.+|+.||++||+. +||.||+||+|||+|+.|+++|+|.|+|.-+....
T Consensus 269 GGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~-- 341 (591)
T KOG0986|consen 269 GGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK-- 341 (591)
T ss_pred CCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCCC--
Confidence 9999888866543 5699999999999999999999998 99999999999999999999999999999775544
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
......||.+|||||++.+. .|+...|+||+||++|+|+.|+.||....... .++.++... +....
T Consensus 342 -~~~~rvGT~GYMAPEvl~ne--~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv--------k~eEvdrr~---~~~~~ 407 (591)
T KOG0986|consen 342 -PIRGRVGTVGYMAPEVLQNE--VYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV--------KREEVDRRT---LEDPE 407 (591)
T ss_pred -ccccccCcccccCHHHHcCC--cccCCccHHHHHhHHHHHHcccCchhhhhhhh--------hHHHHHHHH---hcchh
Confidence 23455799999999999886 68889999999999999999999997544322 111222211 12234
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHH
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMT 332 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 332 (373)
+++..+++++++|.+..|+.||.+|....
T Consensus 408 ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 408 EYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred hcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 56677889999999999999999998654
No 350
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.3e-37 Score=280.34 Aligned_cols=255 Identities=22% Similarity=0.271 Sum_probs=198.2
Q ss_pred hhhhcccCCCCcEEEEEEEEc----CCceeEEEEeccCc-----cCHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeE
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSK-----FSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~----~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~ 136 (373)
|++.+.||+|++|.||++... ++..+|+|.++... ...+.+.+|+.++..+ +||||+++++.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 456789999999999999743 56789999987532 1235678899999999 5999999999999999999
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
+||||+++++|.+++. ....+++..+..++.|+++||.|||+. +++|+||+|+||+++.++.++|+|||++..
T Consensus 82 lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 82 LILDYVNGGELFTHLY----QREHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEecCCCCcHHHHHh----hcCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 9999999999988873 234688999999999999999999998 999999999999999999999999999875
Q ss_pred CCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCC
Q 048542 217 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGD 296 (373)
Q Consensus 217 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
....... ......|+..|+|||.+.+.....+.++|+||||+++|+|++|..||........ ... .........
T Consensus 155 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~---~~~-~~~~~~~~~- 228 (288)
T cd05583 155 FLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS---QSE-ISRRILKSK- 228 (288)
T ss_pred ccccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch---HHH-HHHHHHccC-
Confidence 4332211 1123458889999999866433467899999999999999999999864332110 011 111111111
Q ss_pred cccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 297 LELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
...+..++..+.+++.+||+.||++|||+.++.+.|+-
T Consensus 229 ------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 229 ------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 11223345678999999999999999999988887764
No 351
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=5.5e-37 Score=279.00 Aligned_cols=252 Identities=22% Similarity=0.347 Sum_probs=192.1
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC--HHHHHHHHHHhcccC-CCceeeEeeEeeeCCeeEEEEe
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS--AEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~e 140 (373)
..|++.+.||+|+||.||+|.++ +++.||+|.++..... ...+..|+.++.+.. ||||+++++++.+....+++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 34677899999999999999977 4889999998764332 245667777676664 9999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN-GCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~-~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
|++ +++.++... ....+++..+..++.|++.|++|||+ . +++||||+|+||+++.++.+||+|||++.....
T Consensus 95 ~~~-~~l~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 95 LMS-TCLDKLLKR---IQGPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred ccC-cCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 985 466655522 13478999999999999999999996 5 899999999999999999999999999876543
Q ss_pred CCCceeeecccCCCCccccccccccc--CCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCc
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNF--GTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 297 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (373)
... .....++..|+|||.+.+.. +.++.++|+||||+++|+|++|+.||....... . ...........
T Consensus 168 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~-~~~~~~~~~~~ 237 (296)
T cd06618 168 SKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF------E-VLTKILQEEPP 237 (296)
T ss_pred CCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH------H-HHHHHhcCCCC
Confidence 221 12334778999999986542 347889999999999999999999986432210 0 11111111111
Q ss_pred ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 298 ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
..... ..++.++.+++.+||+.||++||+++++++.
T Consensus 238 ~~~~~----~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 238 SLPPN----EGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCCC----CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11111 1245678999999999999999999999863
No 352
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4e-38 Score=268.89 Aligned_cols=268 Identities=21% Similarity=0.263 Sum_probs=199.6
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-C----CceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeee-CCeeE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-T----GGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSE-GSKRA 136 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~----~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~-~~~~~ 136 (373)
.|+....||+|.||.||+|..+ + ...+|||.++..+.. .....+|+.+++.++|||++.+..++.. +...+
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence 5677899999999999999533 2 237899999865332 2456899999999999999999998866 88999
Q ss_pred EEEeccCcCCccccccCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC----CceEEeec
Q 048542 137 LVYEYMPNGSLDRHVFPK-ESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN----FIPKVSDF 211 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~----~~~kl~Df 211 (373)
+++||.+. +|...+.-+ ..+...++...+..|+.||+.|+.|||++ =|+||||||.|||+..+ |.+||+||
T Consensus 105 l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 105 LLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred EEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeecc
Confidence 99999977 676666433 23346799999999999999999999998 79999999999999877 89999999
Q ss_pred cCcccCCCCCCc-eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccc--cccchHHHH
Q 048542 212 GLAKFHPKENDF-VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSS--KAYFPSWVY 288 (373)
Q Consensus 212 g~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~~ 288 (373)
|+++.+...-.. ......+.|..|.|||.+.|. ..|+.+.||||+||++.||++-.+.|........ ..+-.+.+.
T Consensus 181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa-~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGA-RHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred cHHHHhhccccccccCCceEEEEEecChHHhccc-ccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 999976544322 234455689999999999886 6899999999999999999999887765442211 122122222
Q ss_pred HHHhcCCCc---ccCc---cch-----------------hh------HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 048542 289 DQLNKGGDL---ELQN---VTE-----------------IE------SMIARKLCMIGLWCIQVKAADRPSMTKVLEML 338 (373)
Q Consensus 289 ~~~~~~~~~---~~~~---~~~-----------------~~------~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L 338 (373)
..++--+.+ ..+. ..+ +. ..-+....+|+.++|..||-+|.|+++.++..
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 222111110 0000 000 00 00123478999999999999999999998754
No 353
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.7e-37 Score=285.75 Aligned_cols=262 Identities=19% Similarity=0.250 Sum_probs=191.1
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEeeeC----------
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFCSEG---------- 132 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---------- 132 (373)
.+|.+.+.||.|+||.||+|... +++.||+|.+...... .+.+.+|+.+++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 45677899999999999999865 6889999998765433 36688999999999999999999776543
Q ss_pred ----CeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeee-CCCceE
Q 048542 133 ----SKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD-HNFIPK 207 (373)
Q Consensus 133 ----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~-~~~~~k 207 (373)
...+++|||++ ++|.+++. ...+++..+..++.|+++||.|||+. +++||||||+||+++ .++.++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~k 155 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE-----QGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLK 155 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEE
Confidence 35789999996 58877662 24588999999999999999999998 999999999999997 456789
Q ss_pred EeeccCcccCCCCCCce-eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc----
Q 048542 208 VSDFGLAKFHPKENDFV-SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY---- 282 (373)
Q Consensus 208 l~Dfg~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~---- 282 (373)
|+|||++.......... ......++..|+|||.+.+. ..++.++|||||||++|+|++|+.||...........
T Consensus 156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSP-NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred ECCcccceecCCccccccccccccccccccCHHHHhCc-cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 99999987553221111 11223478899999987542 3577899999999999999999999975432110000
Q ss_pred -----------chHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 283 -----------FPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 283 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..........................++..+.+++.+||+.||.+|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000000000000000000011112235677899999999999999999999985
No 354
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=8.7e-37 Score=275.68 Aligned_cols=260 Identities=22% Similarity=0.358 Sum_probs=195.1
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC--HHHHHHHHHHhcccC-CCceeeEeeEeeeCCeeEEEEecc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS--AEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
|++.+.||.|++|.||+|... +++.++||.+...... .....+|+..++.++ |+|++++++++.++...++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 456788999999999999976 5788999998764332 234567999999998 999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 222 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 222 (373)
+++|.+.+.... +..+++..+..++.|++.+|.|||++ +++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 -~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 81 -EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred -CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCC
Confidence 788888774322 34689999999999999999999998 999999999999999999999999999876543222
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccc---------cchHHHHH-HHh
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKA---------YFPSWVYD-QLN 292 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~---------~~~~~~~~-~~~ 292 (373)
.....++..|+|||.+.+. ..++.++|+||||+++++|++|+.||.......... .-..|... ...
T Consensus 155 ---~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07830 155 ---YTDYVSTRWYRAPEILLRS-TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLA 230 (283)
T ss_pred ---cCCCCCcccccCceeeecC-cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhh
Confidence 1234578899999988543 357889999999999999999999986554221100 00001000 000
Q ss_pred cCCCcccCc-----cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 293 KGGDLELQN-----VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 293 ~~~~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
......... ........+..+.+++.+||+.+|++|||++|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000000 01111122467999999999999999999999976
No 355
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-37 Score=272.89 Aligned_cols=271 Identities=24% Similarity=0.341 Sum_probs=201.2
Q ss_pred HHHHHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhccc--CCCceeeEeeEeeeC----Ce
Q 048542 61 QIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI--HHVNVVQLLGFCSEG----SK 134 (373)
Q Consensus 61 ~i~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l--~h~ni~~~~~~~~~~----~~ 134 (373)
.-.+.+-.+.+.||+|.||.||+|.++ |+.||||++... +...+.+|.++++.. +|+||+.+++.=..+ ..
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr--dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR--DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred HhhhheeEEEEEecCccccceeecccc-CCceEEEEeccc--chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 334455567789999999999999999 999999998643 457788888888764 899999998764332 35
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcC-----CCCCeEecCcCCCCeeeeCCCceEEe
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG-----CDVCILHFDIKPHNILLDHNFIPKVS 209 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~-----~~~~ivH~dikp~Nil~~~~~~~kl~ 209 (373)
++||++|.+.|||+|++. ...++.+...+++..+|.||++||.. ..+.|.|||||..|||+..++.+.|+
T Consensus 284 LwLvTdYHe~GSL~DyL~-----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLN-----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred EEEeeecccCCcHHHHHh-----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 789999999999999993 36688899999999999999999963 35789999999999999999999999
Q ss_pred eccCcccCCCCCCce--eeecccCCCCcccccccccccC--Cc-C-cccchHHHHHHHHHHHcCC----------CCCCC
Q 048542 210 DFGLAKFHPKENDFV--SISATRGTIGYIAPELISRNFG--TV-S-CKSDVYGFGMVLLEMAGGR----------RNSNM 273 (373)
Q Consensus 210 Dfg~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~--~~-s-~~~DvwslG~~l~~ll~g~----------~p~~~ 273 (373)
|+|+|.......... ..+..+||.+|||||++..... .+ + ..+||||||.++||+.... .||.+
T Consensus 359 DLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd 438 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYD 438 (513)
T ss_pred eceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCccc
Confidence 999998766543322 2345679999999999865311 11 1 2589999999999998542 45544
Q ss_pred CcCccccccchHHHHHHH-hcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 274 NATRSSKAYFPSWVYDQL-NKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
.-+... .+.+ +.+.+ .+..++..++ ..........+.+||+.||..+|.-|.|+--+-+.|..+.+
T Consensus 439 ~Vp~DP--s~ee-MrkVVCv~~~RP~ipn-rW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 439 VVPSDP--SFEE-MRKVVCVQKLRPNIPN-RWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCC--CHHH-HhcceeecccCCCCCc-ccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 332111 0100 11111 1112222222 22223445678999999999999999999999999987654
No 356
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2.8e-36 Score=276.51 Aligned_cols=245 Identities=26% Similarity=0.352 Sum_probs=191.8
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
+...+.||+|+||.||+|... ++..|++|.+..... ....+.+|+.+++.++|||++++++++.+....+++|||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 444578999999999999865 688999999865332 225678899999999999999999999999999999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
+. +++.+.+.. ....+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 103 ~~-~~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~- 174 (313)
T cd06633 103 CL-GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA- 174 (313)
T ss_pred CC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCCC-
Confidence 95 577666532 245689999999999999999999998 9999999999999999999999999988643221
Q ss_pred CceeeecccCCCCccccccccc-ccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 222 DFVSISATRGTIGYIAPELISR-NFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
....|+..|+|||.+.. ..+.++.++||||||+++|+|++|..||....... ...... .......
T Consensus 175 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~-------~~~~~~-~~~~~~~- 240 (313)
T cd06633 175 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALYHIA-QNDSPTL- 240 (313)
T ss_pred -----CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-------HHHHHH-hcCCCCC-
Confidence 23458889999999753 12467889999999999999999999986543211 111111 1111111
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
....++..+.+++.+||+.+|.+||++.++++.
T Consensus 241 ----~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 241 ----QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ----CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 112334578999999999999999999999863
No 357
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.3e-37 Score=304.31 Aligned_cols=249 Identities=27% Similarity=0.359 Sum_probs=185.0
Q ss_pred hhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc--cCHHHHHHHHHHhcccCCCceeeEeeEeeeCC-----------
Q 048542 68 HFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS----------- 133 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~----------- 133 (373)
+-.+.||+||||.||+++++ +|+.||||++.... .....+.+|+.++.+|+|||||+++..+.+..
T Consensus 482 EEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~ 561 (1351)
T KOG1035|consen 482 EELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVAS 561 (1351)
T ss_pred HHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccccccc
Confidence 33478999999999999988 89999999998763 33467889999999999999999885441100
Q ss_pred --------------------------------------------------------------------------------
Q 048542 134 -------------------------------------------------------------------------------- 133 (373)
Q Consensus 134 -------------------------------------------------------------------------------- 133 (373)
T Consensus 562 ~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~ 641 (1351)
T KOG1035|consen 562 DSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVI 641 (1351)
T ss_pred chhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccc
Confidence
Q ss_pred ----------------------------eeEEEEeccCcCCccccccCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHcCC
Q 048542 134 ----------------------------KRALVYEYMPNGSLDRHVFPKESRGQSL-CWEKLHEVALGTARGIEYLHNGC 184 (373)
Q Consensus 134 ----------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~l-~~~~~~~i~~~i~~al~~LH~~~ 184 (373)
.+||-||||+..++.+++..+ ... ....+|+++.+|++||+|+|++
T Consensus 642 ~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N----~~~~~~d~~wrLFreIlEGLaYIH~~- 716 (1351)
T KOG1035|consen 642 LDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRN----HFNSQRDEAWRLFREILEGLAYIHDQ- 716 (1351)
T ss_pred cCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhc----ccchhhHHHHHHHHHHHHHHHHHHhC-
Confidence 134566777666665555221 111 4678899999999999999998
Q ss_pred CCCeEecCcCCCCeeeeCCCceEEeeccCcccCC----------------CCCCceeeecccCCCCcccccccccccC-C
Q 048542 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP----------------KENDFVSISATRGTIGYIAPELISRNFG-T 247 (373)
Q Consensus 185 ~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~----------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~ 247 (373)
|++||||||.||+++.++.+||+|||+++... ........+...||.-|+|||.+.+... .
T Consensus 717 --giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~ 794 (1351)
T KOG1035|consen 717 --GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK 794 (1351)
T ss_pred --ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence 99999999999999999999999999998621 0011113456679999999999987632 6
Q ss_pred cCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCC
Q 048542 248 VSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAAD 327 (373)
Q Consensus 248 ~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 327 (373)
|+.|+|+||+|++++||+. ||...-. ...+...++.+..+.. ..+...-...-.+++.+|++.||.+
T Consensus 795 Yn~KiDmYSLGIVlFEM~y---PF~TsME-------Ra~iL~~LR~g~iP~~---~~f~~~~~~~e~slI~~Ll~hdP~k 861 (1351)
T KOG1035|consen 795 YNSKIDMYSLGIVLFEMLY---PFGTSME-------RASILTNLRKGSIPEP---ADFFDPEHPEEASLIRWLLSHDPSK 861 (1351)
T ss_pred ccchhhhHHHHHHHHHHhc---cCCchHH-------HHHHHHhcccCCCCCC---cccccccchHHHHHHHHHhcCCCcc
Confidence 9999999999999999994 4543322 2224445554433332 2222222344578999999999999
Q ss_pred CCCHHHHHH
Q 048542 328 RPSMTKVLE 336 (373)
Q Consensus 328 Rps~~ell~ 336 (373)
|||+.|+|.
T Consensus 862 RPtA~eLL~ 870 (1351)
T KOG1035|consen 862 RPTATELLN 870 (1351)
T ss_pred CCCHHHHhh
Confidence 999999986
No 358
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2e-36 Score=270.76 Aligned_cols=248 Identities=23% Similarity=0.283 Sum_probs=193.9
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc------cCHHHHHHHHHHhcccCCCceeeEeeEeeeC--CeeE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK------FSAEEFINEVSTIGRIHHVNVVQLLGFCSEG--SKRA 136 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~~~ 136 (373)
.|++.+.||+|+||.||+|... ++..+|+|.+.... .....+.+|+.+++.++|+||+++++++.+. ...+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 4667899999999999999865 68899999875321 1225788899999999999999999988654 4678
Q ss_pred EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 137 LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
+++||+++++|.+++. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++..
T Consensus 83 ~v~e~~~~~~L~~~~~----~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 83 IFVEYMPGGSIKDQLK----AYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEeCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 9999999999988873 234578899999999999999999998 999999999999999999999999999975
Q ss_pred CCCCCC-ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 217 HPKEND-FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 217 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
...... ........++..|+|||.+.+. .++.++|+|||||++|+|++|+.||...... ....+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~ 226 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGE--GYGRKADVWSVACTVVEMLTEKPPWAEYEAM-------AAIFKIATQPT 226 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCC--CCCccccHHHHHHHHHHHHhCCCCCCccCHH-------HHHHHHHcCCC
Confidence 432111 1112234588899999998764 6788999999999999999999998643221 11111111111
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
. ...+..++..+.+++.+||+ +|..||++.+++.
T Consensus 227 ~------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 227 K------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred C------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 1 12334566789999999999 5799999998875
No 359
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.3e-37 Score=284.00 Aligned_cols=266 Identities=21% Similarity=0.265 Sum_probs=200.2
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc---cCHHHHHHHHHHhcccCCCceeeEeeEeeeCC-----eeEE
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK---FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS-----KRAL 137 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-----~~~l 137 (373)
|++.+.||.|++|.||+|... +++.+|+|.+.... ...+.+.+|+.+++.++|+||+++++++.... ..|+
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 667899999999999999976 58899999987643 23467889999999999999999999987765 7899
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
+|||++ ++|.+.+. .+..+++..+..++.+++.||+|||+. +++|+||||+||+++.++.++|+|||++...
T Consensus 82 v~e~~~-~~l~~~l~----~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 82 VTELME-TDLHKVIK----SPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred Eecchh-hhHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 999997 47877773 234799999999999999999999998 9999999999999999999999999999866
Q ss_pred CCCCCc-eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc---------hHH-
Q 048542 218 PKENDF-VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF---------PSW- 286 (373)
Q Consensus 218 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~---------~~~- 286 (373)
...... .......++..|+|||.+.+. ..++.++|+||+|+++|+|++|..||...........+ ..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSS-SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred cccccccccccccccccCcCCceeeecc-cCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 443210 112334578899999998764 26788999999999999999999999755422100000 000
Q ss_pred ------HHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH--HhcC
Q 048542 287 ------VYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM--LEGS 341 (373)
Q Consensus 287 ------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~--L~~~ 341 (373)
....+.................++..+.+++.+||+.+|.+|||++++++. +++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 295 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL 295 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence 000000000000000111223356789999999999999999999999873 5554
No 360
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.7e-36 Score=274.12 Aligned_cols=255 Identities=22% Similarity=0.331 Sum_probs=191.4
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhccc---CCCceeeEeeEeeeCCe-----
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRI---HHVNVVQLLGFCSEGSK----- 134 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l---~h~ni~~~~~~~~~~~~----- 134 (373)
|++.+.||+|+||.||+|.++ ++..+|+|.++..... ...+.+|+.+++.+ +|+|++++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 456788999999999999977 5889999998754322 24566777776665 59999999999987766
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
.+++|||+. ++|.+++.... ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhcc-cCHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 899999996 47877764322 23589999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhc-
Q 048542 215 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNK- 293 (373)
Q Consensus 215 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~- 293 (373)
........ .....++..|+|||.+.+. .++.++|+|||||++|+|++|..||........ .... ......
T Consensus 155 ~~~~~~~~---~~~~~~~~~~~~PE~~~~~--~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~---~~~~-~~~~~~~ 225 (287)
T cd07838 155 RIYSFEMA---LTSVVVTLWYRAPEVLLQS--SYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ---LDKI-FDVIGLP 225 (287)
T ss_pred eeccCCcc---cccccccccccChHHhccC--CCCCcchhhhHHHHHHHHHhCCCcccCCChHHH---HHHH-HHHcCCC
Confidence 76543321 1223478899999998764 678899999999999999999988875432210 0000 000000
Q ss_pred -------C--------CCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 294 -------G--------GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 294 -------~--------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
. ..............++..+.+++.+||+.||++||++++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 226 SEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred ChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0 000000112222345678899999999999999999999985
No 361
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=6.3e-37 Score=275.92 Aligned_cols=247 Identities=23% Similarity=0.337 Sum_probs=198.2
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccC-CCceeeEeeEeeeCCeeEEEE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~ 139 (373)
.|.+.+.||+|+||.||+|... +++.+|+|++..... ....+.+|..+++.++ ||||+++++++..+...+++|
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 3667789999999999999865 789999999876322 2356788999999998 999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
||+++++|.+++. +...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~----~~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 82 EYAPNGELLQYIR----KYGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred cCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 9999999998883 334799999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCc------------------eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccc
Q 048542 220 ENDF------------------VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKA 281 (373)
Q Consensus 220 ~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~ 281 (373)
.... .......++..|+|||.+.+. ..+.++|+||||++++++++|..||......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---- 228 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK--PAGKSSDLWALGCIIYQMLTGKPPFRGSNEY---- 228 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCC--CCChhhhHHHHHHHHHHHHhCCCCCCCccHH----
Confidence 2211 112233578899999988764 6788999999999999999999998755421
Q ss_pred cchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCH----HHHHH
Q 048542 282 YFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSM----TKVLE 336 (373)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~----~ell~ 336 (373)
......... . ...+..++..+.+++.+||+.+|.+|||+ +++++
T Consensus 229 ----~~~~~~~~~-~------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 229 ----LTFQKILKL-E------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ----HHHHHHHhc-C------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 111111111 1 11122336678999999999999999999 77764
No 362
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.1e-36 Score=282.64 Aligned_cols=262 Identities=21% Similarity=0.258 Sum_probs=194.6
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeCC------e
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEGS------K 134 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~------~ 134 (373)
.+|++.+.||+|+||.||+|... ++..||+|.+...... ...+.+|+.+++.++||||+++++++..+. .
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07880 15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHD 94 (343)
T ss_pred cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccce
Confidence 35667799999999999999855 7889999998653222 356789999999999999999999886543 3
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
.++||||+ +++|.+++. ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||++
T Consensus 95 ~~lv~e~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 95 FYLVMPFM-GTDLGKLMK-----HEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred EEEEEecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 58999998 778877762 24688999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccc-------cchHHH
Q 048542 215 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKA-------YFPSWV 287 (373)
Q Consensus 215 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~-------~~~~~~ 287 (373)
....... ....++..|+|||.+.+. ..++.++|+||+|+++|+|++|..||.......... ..+...
T Consensus 166 ~~~~~~~-----~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07880 166 RQTDSEM-----TGYVVTRWYRAPEVILNW-MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEF 239 (343)
T ss_pred cccccCc-----cccccCCcccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 7553321 234578899999988653 357889999999999999999999997543210000 000000
Q ss_pred HHHHhcC---------CCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHH--HHHhcC
Q 048542 288 YDQLNKG---------GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVL--EMLEGS 341 (373)
Q Consensus 288 ~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell--~~L~~~ 341 (373)
...+... ..............++..+.+++.+|++.||++|||+.+++ ..++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 240 VQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred HHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence 0000000 00000000111223456789999999999999999999998 445444
No 363
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=7.2e-37 Score=272.84 Aligned_cols=249 Identities=23% Similarity=0.330 Sum_probs=193.8
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccC------ccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENS------KFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 138 (373)
+|.+.+.||+|+||.||++... .+..+++|+++.. .....++..|+.+++.++||||+++++++.+....+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 3667899999999999999865 3445666665432 12234567789999999999999999999988999999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
+||+++++|.+++......+..+++..+..++.|++.|+.|||+. +++|+||+|+||+++. +.++|+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999888754334456799999999999999999999998 9999999999999975 569999999987654
Q ss_pred CCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
.... ......|+..|+|||.+.+. .++.++|+||||+++|+|++|..||...... ........+...
T Consensus 157 ~~~~--~~~~~~~~~~~~~pe~~~~~--~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~- 223 (260)
T cd08222 157 GSCD--LATTFTGTPYYMSPEALKHQ--GYDSKSDIWSLGCILYEMCCLAHAFEGQNFL--------SVVLRIVEGPTP- 223 (260)
T ss_pred CCcc--cccCCCCCcCccCHHHHccC--CCCchhhHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHcCCCC-
Confidence 3222 12234578899999988654 6778899999999999999999998643211 111111112111
Q ss_pred cCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 299 LQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 299 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..+..++..+.+++.+||+.+|++||++.++++
T Consensus 224 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 224 -----SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -----CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 122455678999999999999999999999986
No 364
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.6e-36 Score=279.71 Aligned_cols=258 Identities=22% Similarity=0.256 Sum_probs=192.4
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc---cCHHHHHHHHHHhcccCCCceeeEeeEeee-CCeeEEEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK---FSAEEFINEVSTIGRIHHVNVVQLLGFCSE-GSKRALVY 139 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-~~~~~lv~ 139 (373)
..|++.+.||.|+||.||+|... ++..||+|.+.... .....+.+|+.+++.++||||+++++++.. ....++++
T Consensus 10 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~ 89 (328)
T cd07856 10 NRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVT 89 (328)
T ss_pred cceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEe
Confidence 45677899999999999999865 78899999876432 234677899999999999999999998865 56789999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
||+ +++|.+++. ...+++..+..++.|+++||.|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 90 e~~-~~~L~~~~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~ 160 (328)
T cd07856 90 ELL-GTDLHRLLT-----SRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDP 160 (328)
T ss_pred ehh-ccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccccCC
Confidence 998 568877762 34578888899999999999999998 999999999999999999999999999875432
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc-------chHHHHHHHh
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY-------FPSWVYDQLN 292 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~-------~~~~~~~~~~ 292 (373)
.. ....++..|+|||.+.+. ..++.++|+||||+++|+|++|+.||........... .+........
T Consensus 161 ~~-----~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (328)
T cd07856 161 QM-----TGYVSTRYYRAPEIMLTW-QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTIC 234 (328)
T ss_pred Cc-----CCCcccccccCceeeecc-CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 11 233578889999987542 3578899999999999999999999865432110000 0000000000
Q ss_pred cCCCc---------ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 293 KGGDL---------ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 293 ~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
..... ......+....++..+.+++.+||+.+|++|||+++++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 235 SENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred chhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0000011112345789999999999999999999998764
No 365
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1e-36 Score=282.78 Aligned_cols=261 Identities=22% Similarity=0.289 Sum_probs=191.0
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeC------Cee
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEG------SKR 135 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------~~~ 135 (373)
.|.+.+.||+|+||.||+|... +|+.||+|.+..... ....+.+|+.+++.++||||+++++++... ...
T Consensus 16 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 95 (342)
T cd07879 16 RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDF 95 (342)
T ss_pred ceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceE
Confidence 4556789999999999999865 789999999875322 235678999999999999999999988654 246
Q ss_pred EEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcc
Q 048542 136 ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 215 (373)
++++||+.. +|.... +..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 96 ~lv~e~~~~-~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 96 YLVMPYMQT-DLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred EEEeccccc-CHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 899999853 665443 24588999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc-------chHHHH
Q 048542 216 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY-------FPSWVY 288 (373)
Q Consensus 216 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~-------~~~~~~ 288 (373)
...... ....++..|+|||.+.+. ..++.++|||||||++|+|++|+.||........... ......
T Consensus 166 ~~~~~~-----~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07879 166 HADAEM-----TGYVVTRWYRAPEVILNW-MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFV 239 (342)
T ss_pred CCCCCC-----CCceeeecccChhhhcCc-cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 543221 234578889999988652 3578899999999999999999999975432110000 000000
Q ss_pred HHHhcC-------CCcccC--ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH--HHhcCC
Q 048542 289 DQLNKG-------GDLELQ--NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE--MLEGSI 342 (373)
Q Consensus 289 ~~~~~~-------~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~--~L~~~~ 342 (373)
...... ...... .........+..+.+++.+||+.||.+||++++++. .+++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 240 QKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 000000 000000 000111234567899999999999999999999984 366543
No 366
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.5e-36 Score=277.75 Aligned_cols=264 Identities=24% Similarity=0.282 Sum_probs=190.6
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeC--------
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEG-------- 132 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-------- 132 (373)
..|++.+.||.|+||.||+|..+ +++.+|+|.+..... ....+.+|+++++.++||||+++++++.+.
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 87 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKR 87 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccC
Confidence 46778899999999999999866 688999998865332 224567899999999999999999987443
Q ss_pred CeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeecc
Q 048542 133 SKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFG 212 (373)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg 212 (373)
...++++||+.+ ++...+.. ....+++..+..++.|+++||.|||+. +++|+||||+||+++.++.++|+|||
T Consensus 88 ~~~~lv~~~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 88 GSVYMVTPYMDH-DLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred ceEEEEEecCCc-CHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCc
Confidence 346899999965 56555532 235699999999999999999999998 99999999999999999999999999
Q ss_pred CcccCCCCCCc---------eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc
Q 048542 213 LAKFHPKENDF---------VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF 283 (373)
Q Consensus 213 ~~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~ 283 (373)
++......... .......+++.|+|||.+.+. ..++.++|||||||++|+|++|+.||...........+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE-RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCC-CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99754332211 111233467889999987653 35788999999999999999999998654322100000
Q ss_pred -------hHHHHHHHh---cCC--C--cccC-ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 284 -------PSWVYDQLN---KGG--D--LELQ-NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 284 -------~~~~~~~~~---~~~--~--~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
....+.... ... . .... ...+....+...+.+++.+||+.||++|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 000000000 000 0 0000 000111123467899999999999999999999875
No 367
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.2e-36 Score=279.48 Aligned_cols=261 Identities=21% Similarity=0.226 Sum_probs=189.0
Q ss_pred hhhhcccCCCCcEEEEEEEEc-C--CceeEEEEeccCcc---CHHHHHHHHHHhccc-CCCceeeEeeEeee----CCee
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-T--GGLIAVKMLENSKF---SAEEFINEVSTIGRI-HHVNVVQLLGFCSE----GSKR 135 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~--~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~----~~~~ 135 (373)
|++.+.||+|+||.||++... + +..||+|.+..... ....+.+|+.+++.+ +||||+++++.+.. ....
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 567789999999999999865 4 67899998875322 235678899999999 59999999987532 2457
Q ss_pred EEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcc
Q 048542 136 ALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 215 (373)
+++++|+. ++|.+.+. .+..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 82 ~~~~e~~~-~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 82 YLYEELME-ADLHQIIR----SGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEeccc-CCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 88999985 68887773 345689999999999999999999998 99999999999999999999999999997
Q ss_pred cCCCCCCc--eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccc--------cchH
Q 048542 216 FHPKENDF--VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKA--------YFPS 285 (373)
Q Consensus 216 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~--------~~~~ 285 (373)
........ .......|+..|+|||.+.+. ..++.++|+||+|+++|+|++|..||.......... ....
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSF-QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 55432211 112234688999999987543 357889999999999999999999987543210000 0000
Q ss_pred HHHH--------HHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 286 WVYD--------QLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 286 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.... ....................+..+.+++.+||+.||.+|||++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000 00000000000001111123567899999999999999999999864
No 368
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=299.99 Aligned_cols=257 Identities=27% Similarity=0.451 Sum_probs=209.3
Q ss_pred hhhcccCCCCcEEEEEEEEc----C----CceeEEEEeccCccC--HHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeE
Q 048542 68 HFTHKLGQGGFGSVYKGQLQ----T----GGLIAVKMLENSKFS--AEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRA 136 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~~----~----~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~ 136 (373)
.+.+.+|+|.||.|++|..+ . ...||||.++..... .+.+..|+++|+.+ +|+||+.++|+|......+
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~ 378 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLY 378 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceE
Confidence 55679999999999999743 1 347999998865444 47889999999999 6999999999999999999
Q ss_pred EEEeccCcCCccccccCCC---C-------CC--CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC
Q 048542 137 LVYEYMPNGSLDRHVFPKE---S-------RG--QSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF 204 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~---~-------~~--~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~ 204 (373)
+|+||+..|+|.+++...+ . .. ..++....+.++.|||.|++||++. +++|||+-.+|||+..+.
T Consensus 379 ~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~~~ 455 (609)
T KOG0200|consen 379 VIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLITKNK 455 (609)
T ss_pred EEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEecCCC
Confidence 9999999999999996554 0 01 2388999999999999999999998 999999999999999999
Q ss_pred ceEEeeccCcccCCCCCCceeeeccc--CCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccc
Q 048542 205 IPKVSDFGLAKFHPKENDFVSISATR--GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKA 281 (373)
Q Consensus 205 ~~kl~Dfg~~~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~ 281 (373)
.+||+|||+++.......+.. .... -+..|||||.+... .|+.++||||||+++||+++ |..|++....
T Consensus 456 ~~kIaDFGlar~~~~~~~y~~-~~~~~~LP~kWmApEsl~~~--~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~----- 527 (609)
T KOG0200|consen 456 VIKIADFGLARDHYNKDYYRT-KSSAGTLPVKWMAPESLFDR--VFTSKSDVWSFGILLWEIFTLGGTPYPGIPP----- 527 (609)
T ss_pred EEEEccccceeccCCCCceEe-cCCCCccceeecCHHHhccC--cccccchhhHHHHHHHHHhhCCCCCCCCCCc-----
Confidence 999999999986555444332 2222 34569999999764 89999999999999999998 6677754221
Q ss_pred cchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 282 YFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
...+.+.+..|.+.+.+. .++.++.++|+.||+.+|++||++.++.+.++..+.
T Consensus 528 --~~~l~~~l~~G~r~~~P~------~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 528 --TEELLEFLKEGNRMEQPE------HCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred --HHHHHHHHhcCCCCCCCC------CCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 122355677777766553 345688999999999999999999999999998543
No 369
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=3.5e-36 Score=279.53 Aligned_cols=258 Identities=22% Similarity=0.268 Sum_probs=189.8
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeC------Ce
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEG------SK 134 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------~~ 134 (373)
.+|.+.+.||+|+||.||+|... +++.||+|.+...... .+.+.+|+.+++.++||||+++++++... ..
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 96 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccccc
Confidence 35666789999999999999854 7889999998754322 35678899999999999999999988543 34
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
.+++++++ +++|.+.+. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 97 ~~lv~~~~-~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~dfg~~ 167 (345)
T cd07877 97 VYLVTHLM-GADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 167 (345)
T ss_pred EEEEehhc-ccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEeccccc
Confidence 67888887 778877662 23588999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc-------hHHH
Q 048542 215 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF-------PSWV 287 (373)
Q Consensus 215 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~-------~~~~ 287 (373)
...... .....++..|+|||.+.+. ..++.++||||+||++|+|++|+.||...........+ +...
T Consensus 168 ~~~~~~-----~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
T cd07877 168 RHTDDE-----MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 241 (345)
T ss_pred cccccc-----ccccccCCCccCHHHHhCc-cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 754322 1234578899999987653 35788999999999999999999998654321100000 0000
Q ss_pred HHHHhcC---------CCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 288 YDQLNKG---------GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 288 ~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
...+... ...............+..+.+++.+|++.||.+|||+.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 242 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0000000 0000000000001235678999999999999999999998863
No 370
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.3e-36 Score=282.32 Aligned_cols=257 Identities=21% Similarity=0.275 Sum_probs=193.0
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCe------
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSK------ 134 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~------ 134 (373)
..|.+.+.||+|++|.||+|... ++..||+|.+..... ....+.+|+.+++.++|||++++++++.....
T Consensus 15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD 94 (343)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence 35677899999999999999976 678999998865322 23567789999999999999999987765544
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
.++|+||+ +++|.+++. ...+++..+..++.|+++||+|||+. +++|+||||+||+++.++.++|+|||++
T Consensus 95 ~~lv~e~~-~~~L~~~~~-----~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 95 VYLVTHLM-GADLNNIVK-----CQKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred EEEEEecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccc
Confidence 89999998 668888773 24689999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc-------hHHH
Q 048542 215 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF-------PSWV 287 (373)
Q Consensus 215 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~-------~~~~ 287 (373)
...... .....++..|+|||.+.+. ..++.++||||+|+++|+|++|+.||...........+ +...
T Consensus 166 ~~~~~~-----~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 239 (343)
T cd07851 166 RHTDDE-----MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEEL 239 (343)
T ss_pred cccccc-----ccCCcccccccCHHHHhCC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Confidence 765332 2234578899999988653 35678999999999999999999999754321100000 0000
Q ss_pred HHHHh--------c-CCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 288 YDQLN--------K-GGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 288 ~~~~~--------~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..... . ...............++..+.+++.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 240 LQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 00000 0 0000000001111234678999999999999999999999976
No 371
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=9.9e-36 Score=263.73 Aligned_cols=235 Identities=29% Similarity=0.385 Sum_probs=190.4
Q ss_pred cCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 73 ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
||.|+||.||++... +++.+++|.+..... ..+.+.+|+.+++.++|||++++++.+..+...+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999876 588999999876543 335788999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeee
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS 227 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 227 (373)
.+++.. ...+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++........ ...
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~~ 151 (250)
T cd05123 81 FSHLSK----EGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--RTN 151 (250)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCC--ccc
Confidence 988832 34689999999999999999999998 999999999999999999999999999876543321 123
Q ss_pred cccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhH
Q 048542 228 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIES 307 (373)
Q Consensus 228 ~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
...++..|+|||...+. ..+.++|+||||+++|+|++|..||...... ........ .... .+.
T Consensus 152 ~~~~~~~~~~Pe~~~~~--~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~~------~~~ 214 (250)
T cd05123 152 TFCGTPEYLAPEVLLGK--GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK--------EIYEKILK-DPLR------FPE 214 (250)
T ss_pred CCcCCccccChHHhCCC--CCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHhc-CCCC------CCC
Confidence 44578899999998764 5778999999999999999999998644321 11111211 1111 112
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCHHH
Q 048542 308 MIARKLCMIGLWCIQVKAADRPSMTK 333 (373)
Q Consensus 308 ~~~~~l~~li~~cl~~dp~~Rps~~e 333 (373)
..+..+.+++.+||..||++||++.+
T Consensus 215 ~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 215 FLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 23567899999999999999999954
No 372
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4.5e-36 Score=270.75 Aligned_cols=259 Identities=24% Similarity=0.322 Sum_probs=195.5
Q ss_pred hhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCc---cCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 68 HFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK---FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
++.+.||+|++|.||+|... +++.+|+|.+.... ...+.+.+|+.+++.++|+|++++++++.+....++|+||++
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD 81 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence 45678999999999999876 58999999988643 233677889999999999999999999999999999999997
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
++|.+++... ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 82 -~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 153 (282)
T cd07829 82 -MDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR- 153 (282)
T ss_pred -cCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-
Confidence 5898888432 14689999999999999999999998 999999999999999999999999999876543321
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc-------hHHHHHHHhcC--
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF-------PSWVYDQLNKG-- 294 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~-------~~~~~~~~~~~-- 294 (373)
......++..|+|||.+.+. ..++.++|+||||+++|+|++|..||............ ....+......
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 154 -TYTHEVVTLWYRAPEILLGS-KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred -ccCccccCcCcCChHHhcCC-cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccc
Confidence 12233467789999988653 36788999999999999999999988654321100000 00000000000
Q ss_pred CCcccC-----ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 295 GDLELQ-----NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 295 ~~~~~~-----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.....+ .........+..+.+++.+||+.||++||++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000000 001111223668999999999999999999999986
No 373
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=283.02 Aligned_cols=238 Identities=22% Similarity=0.304 Sum_probs=192.7
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEecc
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
..|++...+|.|+|+.|-.+... +++..++|++..... +..+|+.++... +||||+++++.+.++...|+|||.+
T Consensus 322 ~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~---~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l 398 (612)
T KOG0603|consen 322 ESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD---DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELL 398 (612)
T ss_pred hhhccccccCCCCccceeeeeccccccchhheecccccc---ccccccchhhhhcCCCcceeecceecCCceeeeeehhc
Confidence 45777888999999999999855 788999999987632 224567666555 7999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeee-eCCCceEEeeccCcccCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILL-DHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~-~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
.++-+.+.+.. ..... .++.+|+.+|+.|+.|||++ |++|||+||+|||+ +..++++|+|||.++.....
T Consensus 399 ~g~ell~ri~~----~~~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 399 DGGELLRRIRS----KPEFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred cccHHHHHHHh----cchhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 98887766632 22233 67788999999999999998 99999999999999 58899999999999865443
Q ss_pred CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 222 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 222 ~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
+...+-|..|.|||++... .++.++|+||||++||+||+|+.||...... ..+...+..+
T Consensus 470 ----~~tp~~t~~y~APEvl~~~--~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~------- 529 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQ--EYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMP------- 529 (612)
T ss_pred ----hcccchhhcccChhhhccC--CCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCC-------
Confidence 3455678899999999865 8999999999999999999999998754432 1122222111
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.....+|...++|+.+||+.||.+||++.++..
T Consensus 530 --~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 530 --KFSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred --ccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 122567889999999999999999999999875
No 374
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-36 Score=268.91 Aligned_cols=269 Identities=22% Similarity=0.315 Sum_probs=207.6
Q ss_pred CCccChhHHHHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCH--------HHHHHHHHHhcccCCCceee
Q 048542 54 PKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSA--------EEFINEVSTIGRIHHVNVVQ 124 (373)
Q Consensus 54 ~~~~~~~~i~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~--------~~~~~e~~~l~~l~h~ni~~ 124 (373)
...|........+|-+.+.||+|||+.||+|.+- .++.||+|+-...+.-. +...+|..+.+.|.||.||+
T Consensus 452 nSQFkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVK 531 (775)
T KOG1151|consen 452 NSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVK 531 (775)
T ss_pred hhhhccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeee
Confidence 3445555567788889999999999999999744 57788999865432211 34678999999999999999
Q ss_pred EeeEee-eCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC-
Q 048542 125 LLGFCS-EGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH- 202 (373)
Q Consensus 125 ~~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~- 202 (373)
+|+++. +...+|-|+|||+|.+|+-++ ...+.++++++..|+.||+.||.||... ..+|+|.||||.|||+-.
T Consensus 532 lYDyfslDtdsFCTVLEYceGNDLDFYL----KQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~G 606 (775)
T KOG1151|consen 532 LYDYFSLDTDSFCTVLEYCEGNDLDFYL----KQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNG 606 (775)
T ss_pred eeeeeeeccccceeeeeecCCCchhHHH----HhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecC
Confidence 999985 456788999999999998888 4567799999999999999999999986 678999999999999953
Q ss_pred --CCceEEeeccCcccCCCCCCc-----eeeecccCCCCccccccccc--ccCCcCcccchHHHHHHHHHHHcCCCCCCC
Q 048542 203 --NFIPKVSDFGLAKFHPKENDF-----VSISATRGTIGYIAPELISR--NFGTVSCKSDVYGFGMVLLEMAGGRRNSNM 273 (373)
Q Consensus 203 --~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~s~~~DvwslG~~l~~ll~g~~p~~~ 273 (373)
-|.+||+|||++..+..+... .......||..|++||++-- .....+.|+||||+|+++|..+.|+.||+.
T Consensus 607 tacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGh 686 (775)
T KOG1151|consen 607 TACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGH 686 (775)
T ss_pred cccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCC
Confidence 467999999999987654322 22345579999999998743 245788999999999999999999999987
Q ss_pred CcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 274 NATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
......-. ....+-+.....++. .+.++.+...+|++||+..-++|....++..
T Consensus 687 nqsQQdIL-----qeNTIlkAtEVqFP~----KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 687 NQSQQDIL-----QENTILKATEVQFPP----KPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred chhHHHHH-----hhhchhcceeccCCC----CCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 65432110 011111111111221 1345678899999999999999999888754
No 375
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=270.98 Aligned_cols=267 Identities=22% Similarity=0.306 Sum_probs=205.9
Q ss_pred ccChhHHHHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccCC--C----ceeeEeeE
Q 048542 56 RYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHH--V----NVVQLLGF 128 (373)
Q Consensus 56 ~~~~~~i~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h--~----ni~~~~~~ 128 (373)
.|..+++...+|.+.+.+|+|.||.|-.+.++ ++..||+|+++.-..-.+..+-|++++.++.+ | -++.+.++
T Consensus 80 v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~w 159 (415)
T KOG0671|consen 80 VYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDW 159 (415)
T ss_pred EEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehh
Confidence 46677888899999999999999999999755 57899999998766556677889999999942 3 37788889
Q ss_pred eeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC------
Q 048542 129 CSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH------ 202 (373)
Q Consensus 129 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~------ 202 (373)
|+-.++.|+|+|.+ |.|+.+++.. ++-.+++...+..++.|+++++++||+. +++|.||||+|||+-.
T Consensus 160 FdyrghiCivfell-G~S~~dFlk~--N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 160 FDYRGHICIVFELL-GLSTFDFLKE--NNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred hhccCceEEEEecc-ChhHHHHhcc--CCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEE
Confidence 99999999999998 6699999843 3456789999999999999999999998 9999999999999821
Q ss_pred --------------CCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCC
Q 048542 203 --------------NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268 (373)
Q Consensus 203 --------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~ 268 (373)
+..++++|||.|++..... .....|-.|.|||++.+- .++.++||||+||||+||.+|.
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgL--GwS~pCDvWSiGCIL~ElytG~ 306 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGL--GWSQPCDVWSIGCILVELYTGE 306 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheecc--CcCCccCceeeeeEEEEeeccc
Confidence 2358999999998765443 334578899999999986 7899999999999999999999
Q ss_pred CCCCCCcCcccccc-------chHHHHH------HHhcCCCcccCccc-------------h------hhHHHHHHHHHH
Q 048542 269 RNSNMNATRSSKAY-------FPSWVYD------QLNKGGDLELQNVT-------------E------IESMIARKLCMI 316 (373)
Q Consensus 269 ~p~~~~~~~~~~~~-------~~~~~~~------~~~~~~~~~~~~~~-------------~------~~~~~~~~l~~l 316 (373)
..|....+.+.-.. +|.-+.. ....+ .++.++.. . ........+.+|
T Consensus 307 ~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~-rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDL 385 (415)
T KOG0671|consen 307 TLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRG-RLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDL 385 (415)
T ss_pred eecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcc-cccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHH
Confidence 98876654331111 1111111 11111 22211100 0 011234569999
Q ss_pred HHhhcCCCCCCCCCHHHHHH
Q 048542 317 GLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 317 i~~cl~~dp~~Rps~~ell~ 336 (373)
+++||..||.+|+|+.|++.
T Consensus 386 l~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 386 LRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHccCccccccHHHHhc
Confidence 99999999999999999875
No 376
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=9.5e-36 Score=262.07 Aligned_cols=219 Identities=20% Similarity=0.145 Sum_probs=174.2
Q ss_pred CCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCccccccCC
Q 048542 76 GGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPK 154 (373)
Q Consensus 76 G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 154 (373)
|.+|.||++.++ +++.+|+|.+..... ..+|...+....||||+++++++.+....+++|||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~- 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK- 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH-
Confidence 899999999865 788999999876432 23444555556799999999999999999999999999999888732
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeecccCCCC
Q 048542 155 ESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 234 (373)
Q Consensus 155 ~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~ 234 (373)
...+++..+..++.|+++||.|||+. +++||||||+||+++.++.++++|||.+...... .....++..
T Consensus 79 ---~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~ 147 (237)
T cd05576 79 ---FLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENM 147 (237)
T ss_pred ---hcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCcc
Confidence 34589999999999999999999998 9999999999999999999999999987654332 123346678
Q ss_pred cccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHH
Q 048542 235 YIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLC 314 (373)
Q Consensus 235 y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 314 (373)
|+|||...+. .++.++|+||+|+++|+|++|..|+....... ..... ...+..++..+.
T Consensus 148 y~aPE~~~~~--~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------------~~~~~------~~~~~~~~~~~~ 206 (237)
T cd05576 148 YCAPEVGGIS--EETEACDWWSLGAILFELLTGKTLVECHPSGI-------------NTHTT------LNIPEWVSEEAR 206 (237)
T ss_pred ccCCcccCCC--CCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------------ccccc------cCCcccCCHHHH
Confidence 9999988653 67889999999999999999998765321110 00000 112234567889
Q ss_pred HHHHhhcCCCCCCCCCH
Q 048542 315 MIGLWCIQVKAADRPSM 331 (373)
Q Consensus 315 ~li~~cl~~dp~~Rps~ 331 (373)
+++.+||+.||++||++
T Consensus 207 ~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 207 SLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHccCCHHHhcCC
Confidence 99999999999999997
No 377
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=234.85 Aligned_cols=252 Identities=23% Similarity=0.305 Sum_probs=195.9
Q ss_pred hhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC---HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 68 HFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
.-.++||+|.||+||+|+.. +++.||+|.++.+..+ .....+|+-+++.++|.||++++++...+....+|+|||.
T Consensus 5 dkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd 84 (292)
T KOG0662|consen 5 DKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD 84 (292)
T ss_pred HHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh
Confidence 33578999999999999855 7889999998765433 3677899999999999999999999999999999999994
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
.+|..+.. ..++.+..+.+..++.|+++|+.++|+. ++.|||+||.|.|++.+|.+||+|||+++..+-+-
T Consensus 85 -qdlkkyfd---slng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv-- 155 (292)
T KOG0662|consen 85 -QDLKKYFD---SLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-- 155 (292)
T ss_pred -HHHHHHHH---hcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce--
Confidence 47776662 3467789999999999999999999998 99999999999999999999999999998665433
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCC-CCCCcCccccccchHHHHHHHhcCCCc-----
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNATRSSKAYFPSWVYDQLNKGGDL----- 297 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 297 (373)
..++....|..|.+|.++.+. .-|+...|+||.||++.|+.....| |+..+.. +........-+.+
T Consensus 156 rcysaevvtlwyrppdvlfga-kly~tsidmwsagcifaelanagrplfpg~dvd-------dqlkrif~~lg~p~ed~w 227 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD-------DQLKRIFRLLGTPTEDQW 227 (292)
T ss_pred EeeeceeeeeeccCcceeeee-ehhccchHhhhcchHHHHHhhcCCCCCCCCcHH-------HHHHHHHHHhCCCccccC
Confidence 234455678999999999876 5788899999999999999975544 5444322 1122111111000
Q ss_pred ----ccCc------------cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 298 ----ELQN------------VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 298 ----~~~~------------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.+++ ..++-+.+...=++|+.+.+.-+|.+|+++++.++
T Consensus 228 ps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 228 PSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 0000 01222334455689999999999999999999876
No 378
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-35 Score=282.42 Aligned_cols=252 Identities=27% Similarity=0.346 Sum_probs=207.3
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhccc-CCCceeeEeeEee-----eCCeeEEE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLGFCS-----EGSKRALV 138 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~-----~~~~~~lv 138 (373)
+.+|...||.|.+|.||+++.. +++..|+|+........+++..|.++++.. .|||++.+++++. .++.++||
T Consensus 20 ~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLV 99 (953)
T KOG0587|consen 20 IFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLV 99 (953)
T ss_pred ccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEE
Confidence 3456789999999999999854 788999999998888888899999999988 5999999999884 35679999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
||||.+||..|++.+.. +..+.|..+..|+..++.|+.+||++ .++|||||-.|||++.++.+||+|||++..+.
T Consensus 100 MEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQld 174 (953)
T KOG0587|consen 100 MEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 174 (953)
T ss_pred eeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeeeeee
Confidence 99999999999996544 78899999999999999999999998 99999999999999999999999999987554
Q ss_pred CCCCceeeecccCCCCcccccccccc---cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 219 KENDFVSISATRGTIGYIAPELISRN---FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
.... .-....||+.|||||++... ...|+.++|+||||++..||--|.+|+.++.+. ...+.-..
T Consensus 175 sT~g--rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm----------raLF~IpR 242 (953)
T KOG0587|consen 175 STVG--RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM----------RALFLIPR 242 (953)
T ss_pred cccc--cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh----------hhhccCCC
Confidence 3221 22456799999999998542 346778899999999999999999998776542 11111111
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.+... ..-+...+..+.++|..||..|..+||++.++++
T Consensus 243 NPPPk--Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 243 NPPPK--LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred CCCcc--ccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 11111 1224567889999999999999999999998875
No 379
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-38 Score=261.19 Aligned_cols=254 Identities=24% Similarity=0.300 Sum_probs=196.0
Q ss_pred hcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC--HHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 70 THKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS--AEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
...||.|+||+|++-.++ +|+..|||.++..... ..+++.|..+..+- +.||||++||.+..++..++.||.| ..
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-DI 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-hh
Confidence 357999999999999866 7899999999876543 36778888876665 6899999999999999999999999 55
Q ss_pred Ccccccc-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 146 SLDRHVF-PKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 146 sL~~~l~-~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
||+.+.. -...++..+++..+-.|......||.||-.. ..|+|||+||+|||++..|.+||||||++-.+... .
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S---i 222 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS---I 222 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHHHH---H
Confidence 6654331 1123356688998889999999999999875 69999999999999999999999999998754322 1
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
..+...|...|||||.+......|+.++||||||+.|||+.||+.|+..+... -+ ....+..+..+.+... .
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv------fe-ql~~Vv~gdpp~l~~~-~ 294 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV------FE-QLCQVVIGDPPILLFD-K 294 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH------HH-HHHHHHcCCCCeecCc-c
Confidence 22334577889999999876556899999999999999999999998765431 11 1122222322222211 1
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
-..+++..++.++.-|+..|-++||+..++.++
T Consensus 295 ~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 295 ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 124578899999999999999999999998764
No 380
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-36 Score=264.90 Aligned_cols=244 Identities=24% Similarity=0.303 Sum_probs=198.4
Q ss_pred HHHHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhccc-CCCceeeEeeEeeeCCe
Q 048542 61 QIIAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSK 134 (373)
Q Consensus 61 ~i~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~ 134 (373)
.|....++|...||+|+||+|.+|..+ +.+.||||+++++-. +.+.-..|-++|... +-|.++.++.+|..-++
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 355566788899999999999999866 677899999987532 223445677777766 46899999999999999
Q ss_pred eEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 135 RALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
+|+||||+.||+|--.+ ++-+++.+..+.-++..||-||-+||++ ||+.||||.+||+++.+|++||+|||++
T Consensus 425 LyFVMEyvnGGDLMyhi----QQ~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmc 497 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHI----QQVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMC 497 (683)
T ss_pred eeeEEEEecCchhhhHH----HHhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccc
Confidence 99999999999997666 3446677788888999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcC
Q 048542 215 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKG 294 (373)
Q Consensus 215 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 294 (373)
.-.--. .......+||+.|+|||++.-+ .|+..+|+||+|++||||+.|++||+..+.++ +.+.+...
T Consensus 498 KEni~~--~~TTkTFCGTPdYiAPEIi~Yq--PYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e--------lF~aI~eh 565 (683)
T KOG0696|consen 498 KENIFD--GVTTKTFCGTPDYIAPEIIAYQ--PYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE--------LFQAIMEH 565 (683)
T ss_pred cccccC--CcceeeecCCCcccccceEEec--ccccchhHHHHHHHHHHHHcCCCCCCCCCHHH--------HHHHHHHc
Confidence 732222 1234567899999999999654 88999999999999999999999998776543 33333222
Q ss_pred CCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 048542 295 GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPS 330 (373)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 330 (373)
. ..+|..+|.+...+....|..+|.+|..
T Consensus 566 n-------vsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 566 N-------VSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred c-------CcCcccccHHHHHHHHHHhhcCCccccC
Confidence 1 3455677889999999999999999964
No 381
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-36 Score=252.23 Aligned_cols=266 Identities=22% Similarity=0.311 Sum_probs=195.0
Q ss_pred HHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeee-------
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSE------- 131 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~------- 131 (373)
....|.-..+||+|.||.||+|+.+ +|++||+|++-..+. -.....+|+.++..++|+|++.+++.|..
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 3445666688999999999999865 677889887644222 12556899999999999999999988843
Q ss_pred -CCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEee
Q 048542 132 -GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSD 210 (373)
Q Consensus 132 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~D 210 (373)
....|+||++|+. +|.-++. +...+++..++..++.++..||.|+|.+ .|+|||+||.|+|++.+|.+||+|
T Consensus 95 ~r~t~ylVf~~ceh-DLaGlLs---n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 95 DRATFYLVFDFCEH-DLAGLLS---NRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred ccceeeeeHHHhhh-hHHHHhc---CccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeec
Confidence 2347999999976 7777773 3346799999999999999999999998 999999999999999999999999
Q ss_pred ccCcccCCCCCC--ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccch----
Q 048542 211 FGLAKFHPKEND--FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFP---- 284 (373)
Q Consensus 211 fg~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~---- 284 (373)
||+++....... ...++....|..|.+||.+.|. ..++++.|+|..||++.+|+++.+-+........-..+.
T Consensus 168 FGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~-r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcG 246 (376)
T KOG0669|consen 168 FGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGD-REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCG 246 (376)
T ss_pred cccccceecccccCCCCcccceeeeecCCHHHhhcc-cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhc
Confidence 999975543222 1235566679999999999886 688999999999999999999998877654332111110
Q ss_pred ---HHHHHHHh-----cCCCcc-cCcc-chhhHHH------HHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 285 ---SWVYDQLN-----KGGDLE-LQNV-TEIESMI------ARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 285 ---~~~~~~~~-----~~~~~~-~~~~-~~~~~~~------~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
..+|..+. .....+ ++.. ...-++. .....+|+.+++..||.+||.+++++.
T Consensus 247 s~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 247 SITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred cCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 00110000 000000 1100 0000111 136789999999999999999998875
No 382
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.6e-34 Score=288.61 Aligned_cols=143 Identities=25% Similarity=0.357 Sum_probs=127.6
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC----HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS----AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.|.+.++||+|+||.||+|.+. +++.||||+++..... ...+..|+.+++.++||||+++++++......|+|||
T Consensus 5 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmE 84 (669)
T cd05610 5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVME 84 (669)
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEe
Confidence 4677899999999999999976 7889999998754322 2567889999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcc
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 215 (373)
|+.+++|.+++.. ...+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 85 y~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 85 YLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999988832 34578899999999999999999998 99999999999999999999999999875
No 383
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-36 Score=270.10 Aligned_cols=240 Identities=26% Similarity=0.364 Sum_probs=195.1
Q ss_pred cccCCCCcEEEEEEEEc-CCceeEEEEeccCcc---CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCC
Q 048542 71 HKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGS 146 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gs 146 (373)
+.||+|.||+||-|+++ +|+.||||++.+-+. ...++.+|+.+|+++.||.||.+--.|+..+..++|||.+. |+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-GD 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-GD 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-ch
Confidence 78999999999999865 899999999976433 34778999999999999999999999999999999999995 46
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC---CceEEeeccCcccCCCCCCc
Q 048542 147 LDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN---FIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 147 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+.+.+.. ...+++++..-.-++.||+.||.|||.+ +|+|+||||+|||+... ..+||||||.|+.++...
T Consensus 649 MLEMILS--sEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks-- 721 (888)
T KOG4236|consen 649 MLEMILS--SEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS-- 721 (888)
T ss_pred HHHHHHH--hhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchhh--
Confidence 5555543 3356788888888999999999999998 99999999999999643 479999999999886543
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccc
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVT 303 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (373)
.-....||+.|+|||++.++ .|...-|+||.|+++|--++|.-||....... +.+. ...+....
T Consensus 722 -FRrsVVGTPAYLaPEVLrnk--GyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn----------dQIQ---NAaFMyPp 785 (888)
T KOG4236|consen 722 -FRRSVVGTPAYLAPEVLRNK--GYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN----------DQIQ---NAAFMYPP 785 (888)
T ss_pred -hhhhhcCCccccCHHHHhhc--cccccccceeeeEEEEEEecccccCCCccchh----------HHhh---ccccccCC
Confidence 22456799999999999886 67778899999999999999999997443211 1111 11222223
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHH
Q 048542 304 EIESMIARKLCMIGLWCIQVKAADRPSMTKV 334 (373)
Q Consensus 304 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~el 334 (373)
.-..+++....+||...|+..-++|-|.+.-
T Consensus 786 ~PW~eis~~AidlIn~LLqVkm~kRysvdk~ 816 (888)
T KOG4236|consen 786 NPWSEISPEAIDLINNLLQVKMRKRYSVDKS 816 (888)
T ss_pred CchhhcCHHHHHHHHHHHHHHHHHhcchHhh
Confidence 3346778889999999999999999998764
No 384
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-35 Score=266.22 Aligned_cols=240 Identities=23% Similarity=0.242 Sum_probs=201.3
Q ss_pred HhhhhcccCCCCcEEEEEEEEcCCc-eeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQTGG-LIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~~~~-~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
..+....||-|+||.|-+++.+... .+|+|++++.+. +.+....|-.+|..+++|.||++|--|.+....|++||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 3345567999999999999877444 489999987543 34667899999999999999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
-|-||.|...+ ...+.+......-++..+++|+.|||++ +|+.|||||+|.+++.+|-+||.|||.|+.++..
T Consensus 501 aClGGElWTiL----rdRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 501 ACLGGELWTIL----RDRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhcCchhhhhh----hhcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 99999999888 3456788888888999999999999998 9999999999999999999999999999987665
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.. .-..+||+.|.|||++.+. ..+.++|.||||+++|||++|.+||...++ +..+..+-++...
T Consensus 574 ~K---TwTFcGTpEYVAPEIILnK--GHD~avDyWaLGIli~ELL~G~pPFs~~dp--------mktYn~ILkGid~--- 637 (732)
T KOG0614|consen 574 RK---TWTFCGTPEYVAPEIILNK--GHDRAVDYWALGILIYELLTGSPPFSGVDP--------MKTYNLILKGIDK--- 637 (732)
T ss_pred Cc---eeeecCCcccccchhhhcc--CcchhhHHHHHHHHHHHHHcCCCCCCCCch--------HHHHHHHHhhhhh---
Confidence 42 3456899999999999876 456789999999999999999999987654 3344445444321
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPS 330 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 330 (373)
-+.|+.+.+...+|+++....+|.+|..
T Consensus 638 --i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 638 --IEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred --hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 2445667788899999999999999986
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=4.4e-33 Score=244.87 Aligned_cols=237 Identities=27% Similarity=0.375 Sum_probs=190.6
Q ss_pred CcEEEEEEEEc-CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCccccccC
Q 048542 77 GFGSVYKGQLQ-TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFP 153 (373)
Q Consensus 77 ~~g~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 153 (373)
+||.||+|... +++.+++|++...... .+.+.+|+..++.++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999977 5889999998765443 47889999999999999999999999999999999999999999988743
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeecccCCC
Q 048542 154 KESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTI 233 (373)
Q Consensus 154 ~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~ 233 (373)
. ..+++..+..++.+++.++.+||+. +++|+||+|+||+++.++.++|+|||.+....... ......++.
T Consensus 81 ~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~ 150 (244)
T smart00220 81 R----GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTP 150 (244)
T ss_pred c----cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCc
Confidence 2 2388999999999999999999998 99999999999999999999999999998665432 223455888
Q ss_pred CcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHH
Q 048542 234 GYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKL 313 (373)
Q Consensus 234 ~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 313 (373)
.|++||.+.+. .++.++|+||+|+++++|++|..||...... ................. ...++.++
T Consensus 151 ~~~~pE~~~~~--~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-------~~~~~~~~~~~~~~~~~----~~~~~~~~ 217 (244)
T smart00220 151 EYMAPEVLLGK--GYGKAVDVWSLGVILYELLTGKPPFPGDDQL-------LELFKKIGKPKPPFPPP----EWKISPEA 217 (244)
T ss_pred CCCCHHHHccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-------HHHHHHHhccCCCCccc----cccCCHHH
Confidence 99999988753 6788999999999999999999998653211 11222222221111100 00145688
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHH
Q 048542 314 CMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 314 ~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.+++.+||..+|++||++.++++
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhh
Confidence 99999999999999999999987
No 386
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-34 Score=244.57 Aligned_cols=246 Identities=21% Similarity=0.296 Sum_probs=196.6
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC----HHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEe
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS----AEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
+.+.+.||+|+|++|..++++ +.+.||+|++++.-.+ .+-...|-.+.... +||.++.++.+|..+..+++|.|
T Consensus 252 f~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvie 331 (593)
T KOG0695|consen 252 FDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIE 331 (593)
T ss_pred ceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEE
Confidence 456789999999999999865 7889999999874332 23345677777766 69999999999999999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
|.+||+|--.+ .+..+++++.+.-+...|+-||.|||+. ||+.||+|.+|+|+|..|++||+|+|+++-...+
T Consensus 332 yv~ggdlmfhm----qrqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 332 YVNGGDLMFHM----QRQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EecCcceeeeh----hhhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCCCC
Confidence 99999996555 3457799999999999999999999998 9999999999999999999999999999854333
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccC
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQ 300 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (373)
.. ..+..+||+.|.|||++.+. .|...+|+|++|++++||+.|+.||..-........-.++.++.+....
T Consensus 405 gd--~tstfcgtpnyiapeilrge--eygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq----- 475 (593)
T KOG0695|consen 405 GD--TTSTFCGTPNYIAPEILRGE--EYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ----- 475 (593)
T ss_pred Cc--ccccccCCCcccchhhhccc--ccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc-----
Confidence 33 24567899999999999886 7888999999999999999999999854322111112334444333221
Q ss_pred ccchhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 048542 301 NVTEIESMIARKLCMIGLWCIQVKAADRPS 330 (373)
Q Consensus 301 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 330 (373)
..+|+.++-+...++..-|+.||.+|..
T Consensus 476 --iriprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 476 --IRIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred --ccccceeehhhHHHHHHhhcCCcHHhcC
Confidence 2344556677888899999999999964
No 387
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2e-33 Score=274.25 Aligned_cols=264 Identities=21% Similarity=0.225 Sum_probs=164.5
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc-C----CceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeE------eeeCC
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ-T----GGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF------CSEGS 133 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~-~----~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~------~~~~~ 133 (373)
..|.+.+.||+|+||.||+|.+. + +..||+|.+..... .+.+.++ .+....+.++..+... ...+.
T Consensus 132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (566)
T PLN03225 132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKED 208 (566)
T ss_pred CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-hHHHHHH--HHHhhchhhHHHHHHhhhcccccccCC
Confidence 35677899999999999999875 4 68999998764332 1222121 1111122222222111 24566
Q ss_pred eeEEEEeccCcCCccccccCCCC----------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCC
Q 048542 134 KRALVYEYMPNGSLDRHVFPKES----------------RGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHN 197 (373)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~----------------~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~N 197 (373)
..++|+||+++++|.+++..... .+.......+..++.|++.||.|||+. +|+||||||+|
T Consensus 209 ~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~N 285 (566)
T PLN03225 209 EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQN 285 (566)
T ss_pred ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHHH
Confidence 78999999999999888743210 011122345668999999999999998 99999999999
Q ss_pred eeeeC-CCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccC--------------------CcCcccchHH
Q 048542 198 ILLDH-NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG--------------------TVSCKSDVYG 256 (373)
Q Consensus 198 il~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------------------~~s~~~Dvws 256 (373)
||++. ++.+||+|||++......... ......+++.|+|||.+..... .++.++||||
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred EEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 99985 679999999999755332221 1234568999999996532211 2345679999
Q ss_pred HHHHHHHHHcCCCCCCCCcCc------cccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 048542 257 FGMVLLEMAGGRRNSNMNATR------SSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPS 330 (373)
Q Consensus 257 lG~~l~~ll~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 330 (373)
+||++|||+++..++...... ........|.. ........+.....+..........+|+.+||+.||++|||
T Consensus 365 lGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t 443 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRK-LVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS 443 (566)
T ss_pred HHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHH-hhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCC
Confidence 999999999876554321100 00000111110 00000000000000000111234568999999999999999
Q ss_pred HHHHHH
Q 048542 331 MTKVLE 336 (373)
Q Consensus 331 ~~ell~ 336 (373)
++++++
T Consensus 444 a~e~L~ 449 (566)
T PLN03225 444 AKAALA 449 (566)
T ss_pred HHHHhC
Confidence 999987
No 388
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-33 Score=247.08 Aligned_cols=257 Identities=21% Similarity=0.274 Sum_probs=203.6
Q ss_pred HhhhhcccCCCCcEEEEEEEEc------CCceeEEEEeccC--ccCHHHHHHHHHHhcccCCCceeeEeeEee-eCCeeE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ------TGGLIAVKMLENS--KFSAEEFINEVSTIGRIHHVNVVQLLGFCS-EGSKRA 136 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~------~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-~~~~~~ 136 (373)
+.++...+-+|.||.||+|.+. +.+.|.+|.++.. ..+...++.|-..+..+.|||+.++.+++. +....+
T Consensus 285 Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~ 364 (563)
T KOG1024|consen 285 RVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPF 364 (563)
T ss_pred heechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcce
Confidence 3445567999999999999654 3456778877653 334577889999999999999999999885 456788
Q ss_pred EEEeccCcCCccccccCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeecc
Q 048542 137 LVYEYMPNGSLDRHVFPKE----SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFG 212 (373)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg 212 (373)
+++.++.-|+|..++...+ ...+.++..+...++.|++.|++|||+. +++|.||..+|+++|+...+||+|=.
T Consensus 365 V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDsa 441 (563)
T KOG1024|consen 365 VLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDSA 441 (563)
T ss_pred EEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccch
Confidence 9999999999998885221 2234567778889999999999999998 99999999999999999999999998
Q ss_pred CcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchHHHHHHH
Q 048542 213 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPSWVYDQL 291 (373)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~ 291 (373)
+++-+-..+..-.-.+...+..||+||.+++. .|+.++||||||+++|||+| |+.|+..-+ |..+...+
T Consensus 442 LSRDLFP~DYhcLGDnEnRPvkWMslEal~n~--~yssasDvWsfGVllWELmtlg~~PyaeID--------PfEm~~yl 511 (563)
T KOG1024|consen 442 LSRDLFPGDYHCLGDNENRPVKWMSLEALQNS--HYSSASDVWSFGVLLWELMTLGKLPYAEID--------PFEMEHYL 511 (563)
T ss_pred hccccCcccccccCCCCCCcccccCHHHHhhh--hhcchhhhHHHHHHHHHHHhcCCCCccccC--------HHHHHHHH
Confidence 88754333221111223356789999999886 89999999999999999998 777765444 34466667
Q ss_pred hcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 292 NKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
++|.++.-+ -++++++..+|..||..+|++||++++++.-|.+.
T Consensus 512 kdGyRlaQP------~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 512 KDGYRLAQP------FNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred hccceecCC------CCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 777665433 34567899999999999999999999999988753
No 389
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-34 Score=272.44 Aligned_cols=242 Identities=24% Similarity=0.298 Sum_probs=184.0
Q ss_pred cccCCCCcEE-EEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEeccCcCCcc
Q 048542 71 HKLGQGGFGS-VYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPNGSLD 148 (373)
Q Consensus 71 ~~ig~G~~g~-V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~ 148 (373)
+.+|.|+.|+ ||+|... |+.||||.+-.... +-..+|+..++.- .||||+++|+.-.+.++.|+..|.| ..+|.
T Consensus 515 eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~~--~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~~sL~ 590 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGVYE-GREVAVKRLLEEFF--DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-ACSLQ 590 (903)
T ss_pred HHcccCCCCcEEEEEeeC-CceehHHHHhhHhH--HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-hhhHH
Confidence 5689999987 7999987 88999998765332 3457899999988 6999999999888999999999999 56999
Q ss_pred ccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC---C--CceEEeeccCcccCCCCCC-
Q 048542 149 RHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH---N--FIPKVSDFGLAKFHPKEND- 222 (373)
Q Consensus 149 ~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~---~--~~~kl~Dfg~~~~~~~~~~- 222 (373)
+++...............+.+..|+++||++||+. +|+||||||.||||+. + .+++|+|||+++.+.....
T Consensus 591 dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS 667 (903)
T KOG1027|consen 591 DLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSS 667 (903)
T ss_pred HHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccCCCcch
Confidence 99965311111111145577899999999999997 9999999999999975 2 4789999999998765443
Q ss_pred ceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcC-CCCCCCCcCccccccchHHHHHHHhcCCCcccCc
Q 048542 223 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG-RRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQN 301 (373)
Q Consensus 223 ~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (373)
+....+..||.+|+|||++... .-+.++|+||+||++|+.++| .+||+..-..+. ++..+......
T Consensus 668 ~~r~s~~sGt~GW~APE~L~~~--~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~----------NIl~~~~~L~~- 734 (903)
T KOG1027|consen 668 FSRLSGGSGTSGWQAPEQLRED--RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA----------NILTGNYTLVH- 734 (903)
T ss_pred hhcccCCCCcccccCHHHHhcc--ccCcccchhhcCceEEEEecCCccCCCchHHhhh----------hhhcCccceee-
Confidence 2334566799999999999775 445689999999999999986 899986543321 12222111111
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHH
Q 048542 302 VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVL 335 (373)
Q Consensus 302 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell 335 (373)
.... .+ ....+||.+|++.+|..||++.+|+
T Consensus 735 L~~~-~d--~eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 735 LEPL-PD--CEAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred eccC-ch--HHHHHHHHHhcCCCcccCCCHHHHh
Confidence 1111 11 1688999999999999999999996
No 390
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-34 Score=229.04 Aligned_cols=202 Identities=27% Similarity=0.384 Sum_probs=167.8
Q ss_pred hhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC--HHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 69 FTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS--AEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 69 ~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
-...||+|++|.|-+-++. +|...|+|.++..-.+ .++.++|+.+..+. .+|.+|.+||........++.||.| .
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M-~ 128 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM-D 128 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh-h
Confidence 3477999999999888754 8999999999864333 35677888876665 6899999999999999999999999 5
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
.||+.+...--.++..+++..+-+|+..+..||.|||++ ..++|||+||+|||++.+|++|+||||++-.+.+.-
T Consensus 129 tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi--- 203 (282)
T KOG0984|consen 129 TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI--- 203 (282)
T ss_pred hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehhhh---
Confidence 577766544445678899999999999999999999987 699999999999999999999999999997654322
Q ss_pred eeecccCCCCcccccccccc--cCCcCcccchHHHHHHHHHHHcCCCCCCCCcC
Q 048542 225 SISATRGTIGYIAPELISRN--FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAT 276 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~--~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~ 276 (373)
..+...|...|+|||.+..+ ...|+.|+||||||+.+.||.+++.|++.+..
T Consensus 204 Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 204 AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 22234588899999998653 23688999999999999999999999987664
No 391
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.5e-33 Score=256.51 Aligned_cols=204 Identities=25% Similarity=0.335 Sum_probs=169.0
Q ss_pred cccCCCCcEEEEEEEE-cCCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 71 HKLGQGGFGSVYKGQL-QTGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~-~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
+.||-|+||.|.+++. .+...||.|.+++... .......|-.+|....++-||++|..|.+.+.+|+||+|++||
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGG 714 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG 714 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCc
Confidence 5699999999999974 4677899999886433 2345677889999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC-------
Q 048542 146 SLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP------- 218 (373)
Q Consensus 146 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~------- 218 (373)
++-.+|. +.+-+.+..++-++..+..|+++.|.. |++||||||+|||||.+|++||+|||+|+-+.
T Consensus 715 DmMSLLI----rmgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskY 787 (1034)
T KOG0608|consen 715 DMMSLLI----RMGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 787 (1034)
T ss_pred cHHHHHH----HhccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceecccccc
Confidence 9988884 345688999999999999999999998 99999999999999999999999999986211
Q ss_pred --CCCC-----------c--------------------eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHH
Q 048542 219 --KEND-----------F--------------------VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265 (373)
Q Consensus 219 --~~~~-----------~--------------------~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll 265 (373)
..+. + ......+||+.|+|||++... .++.-+|+||.|++||||+
T Consensus 788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~--g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLART--GYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhccc--CccccchhhHhhHHHHHHh
Confidence 0000 0 001123599999999999875 7788999999999999999
Q ss_pred cCCCCCCCCcCccccccc
Q 048542 266 GGRRNSNMNATRSSKAYF 283 (373)
Q Consensus 266 ~g~~p~~~~~~~~~~~~~ 283 (373)
.|+.||-.....+....+
T Consensus 866 ~g~~pf~~~tp~~tq~kv 883 (1034)
T KOG0608|consen 866 VGQPPFLADTPGETQYKV 883 (1034)
T ss_pred hCCCCccCCCCCcceeee
Confidence 999999877665544333
No 392
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.6e-32 Score=259.41 Aligned_cols=262 Identities=19% Similarity=0.204 Sum_probs=176.1
Q ss_pred HHHhhhhcccCCCCcEEEEEEEE-----------------cCCceeEEEEeccCccC-HHH--------------HHHHH
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQL-----------------QTGGLIAVKMLENSKFS-AEE--------------FINEV 111 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~-----------------~~~~~vaiK~~~~~~~~-~~~--------------~~~e~ 111 (373)
...|.+.++||+|+||.||+|.. ..++.||||.+...... .++ ...|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 33567779999999999999963 23467999998654321 122 23466
Q ss_pred HHhcccCCCc-----eeeEeeEeee--------CCeeEEEEeccCcCCccccccCCCC--------------------CC
Q 048542 112 STIGRIHHVN-----VVQLLGFCSE--------GSKRALVYEYMPNGSLDRHVFPKES--------------------RG 158 (373)
Q Consensus 112 ~~l~~l~h~n-----i~~~~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~--------------------~~ 158 (373)
..+.+++|.+ +++++++|.. ....++||||+++++|.+++..... ..
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 6666676554 3666776643 3467999999999999888753211 11
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccc
Q 048542 159 QSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 238 (373)
Q Consensus 159 ~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aP 238 (373)
..+++..+..++.|++.+|.|||+. +++||||||+||+++.++.+||+|||++......... ......+++.|+||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aP 379 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPP 379 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeCh
Confidence 2356778889999999999999998 9999999999999999999999999998754332211 11122357899999
Q ss_pred cccccccC--------------------CcCcccchHHHHHHHHHHHcCCC-CCCCCcCcc--c---cccchHHHHHHHh
Q 048542 239 ELISRNFG--------------------TVSCKSDVYGFGMVLLEMAGGRR-NSNMNATRS--S---KAYFPSWVYDQLN 292 (373)
Q Consensus 239 E~~~~~~~--------------------~~s~~~DvwslG~~l~~ll~g~~-p~~~~~~~~--~---~~~~~~~~~~~~~ 292 (373)
|.+..... ....+.|+||+||++++|++|.. |+....... . ......| .. .
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~--r~-~ 456 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRW--RM-Y 456 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHH--Hh-h
Confidence 98753210 11234799999999999999875 554221100 0 0001111 11 1
Q ss_pred cCCCcccCccchhhHHHHHHHHHHHHhhcCCCC---CCCCCHHHHHH
Q 048542 293 KGGDLELQNVTEIESMIARKLCMIGLWCIQVKA---ADRPSMTKVLE 336 (373)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp---~~Rps~~ell~ 336 (373)
......+. .....+....+|+.+||..+| .+|+|++|+++
T Consensus 457 ~~~~~~~~----~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 457 KGQKYDFS----LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cccCCCcc----cccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 11111111 122346778999999999766 68999999986
No 393
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=5.5e-32 Score=243.84 Aligned_cols=149 Identities=24% Similarity=0.396 Sum_probs=126.2
Q ss_pred hhhcCCCCCccChhHHHH-HHhhhhcccCCCCcEEEEEEEE-cCCceeEEEEeccCccCHHHHHHHHHHhcccC-----C
Q 048542 47 RNQQSWMPKRYSYPQIIA-MTNHFTHKLGQGGFGSVYKGQL-QTGGLIAVKMLENSKFSAEEFINEVSTIGRIH-----H 119 (373)
Q Consensus 47 ~~~~~~~~~~~~~~~i~~-~~~~~~~~ig~G~~g~V~~~~~-~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-----h 119 (373)
.++..+......+++... .+|.+.++||-|.|++||+|.+ ++.+.||+|+.+...--.+..+.|+++|++++ |
T Consensus 59 ~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~ 138 (590)
T KOG1290|consen 59 EDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPND 138 (590)
T ss_pred hhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCC
Confidence 445666777788888888 8999999999999999999975 46788999999876666677889999999983 3
Q ss_pred ---CceeeEeeEee----eCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecC
Q 048542 120 ---VNVVQLLGFCS----EGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFD 192 (373)
Q Consensus 120 ---~ni~~~~~~~~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~d 192 (373)
..||++++.|. ++.+.|+|+|++ |.+|..++.... .+.++...+.+|++||+.||.|||..+ +|+|.|
T Consensus 139 ~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~--YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTD 213 (590)
T KOG1290|consen 139 PGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSN--YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTD 213 (590)
T ss_pred CCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhC--CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccC
Confidence 36999999984 467899999999 778888885544 345888899999999999999999874 999999
Q ss_pred cCCCCeee
Q 048542 193 IKPHNILL 200 (373)
Q Consensus 193 ikp~Nil~ 200 (373)
|||+|||+
T Consensus 214 lKPENvLl 221 (590)
T KOG1290|consen 214 LKPENVLL 221 (590)
T ss_pred CCcceeee
Confidence 99999997
No 394
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.98 E-value=7.5e-33 Score=253.83 Aligned_cols=195 Identities=22% Similarity=0.333 Sum_probs=168.3
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHH---------HHHHHHhcccC---CCceeeEeeEeeeC
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEF---------INEVSTIGRIH---HVNVVQLLGFCSEG 132 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~---------~~e~~~l~~l~---h~ni~~~~~~~~~~ 132 (373)
.|...+.+|.|+||.|++|.++ +...|+||.+.+.+.-.+.+ -.|+.+|..++ |+||++++++|+++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 4555689999999999999977 56689999998766544433 35999999997 99999999999999
Q ss_pred CeeEEEEecc-CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeec
Q 048542 133 SKRALVYEYM-PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDF 211 (373)
Q Consensus 133 ~~~~lv~e~~-~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Df 211 (373)
+.+|++||.- ++.+|.+++ .....+.+.++..|+.|++.|+++||++ +|+|||||-+|+.++.+|.+||+||
T Consensus 642 d~yyl~te~hg~gIDLFd~I----E~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFI----EFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred CeeEEEecCCCCCcchhhhh----hccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeec
Confidence 9999999986 567888888 4456799999999999999999999999 9999999999999999999999999
Q ss_pred cCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCC
Q 048542 212 GLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSN 272 (373)
Q Consensus 212 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~ 272 (373)
|.+.+..... ....+||..|.|||++.|. ...+..-|||++|++||.++...+||.
T Consensus 715 gsaa~~ksgp----fd~f~gtv~~aapevl~g~-~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSGP----FDVFVGTVDYAAPEVLGGE-KYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCCC----cceeeeeccccchhhhCCC-ccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9998765432 3456799999999999886 344667899999999999999998886
No 395
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=6.5e-34 Score=239.31 Aligned_cols=259 Identities=23% Similarity=0.320 Sum_probs=193.7
Q ss_pred hcccCCCCcEEEEEEEEc-CCceeEEEEeccCc---cCHHHHHHHHHHhcccCCCceeeEeeEeeeCC-----eeEEEEe
Q 048542 70 THKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK---FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS-----KRALVYE 140 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-----~~~lv~e 140 (373)
.+.||-|+||.||.+.+. +|+.||.|.+..-. .+.+++.+|++++..++|.|++..++...... ..|+++|
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 477999999999999865 89999999886532 34478899999999999999999888764432 3578899
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
.| ..+|+..+. +-..++...+.-+.+||++||.|||+. +|.||||||.|.|++.+-.+||+|||+++....+
T Consensus 138 Lm-QSDLHKIIV----SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 138 LM-QSDLHKIIV----SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HH-Hhhhhheec----cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchh
Confidence 98 458888884 446688888899999999999999998 9999999999999999999999999999865433
Q ss_pred CCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHH-------------
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWV------------- 287 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~------------- 287 (373)
. ...++....|..|.|||++.|. ..|+.+.||||.||++.||+..+-.|....+.+.-..+.+..
T Consensus 210 ~-~~hMTqEVVTQYYRAPEiLMGa-RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 210 D-RLNMTHEVVTQYYRAPELLMGA-RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred h-hhhhHHHHHHHHhccHHHhhcc-hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhh
Confidence 2 2334455678899999999886 689999999999999999998887776554432211111110
Q ss_pred ---HHHHhcCCC-cccCccchh--hHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 048542 288 ---YDQLNKGGD-LELQNVTEI--ESMIARKLCMIGLWCIQVKAADRPSMTKVLEML 338 (373)
Q Consensus 288 ---~~~~~~~~~-~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L 338 (373)
...++.+.+ +.+.....+ +.+-......+...++..||+.|.+.++.+..+
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 011111111 111111111 112234567888999999999999999987654
No 396
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.98 E-value=1.7e-32 Score=225.18 Aligned_cols=257 Identities=17% Similarity=0.312 Sum_probs=192.1
Q ss_pred HHHhhhhcccCCCCcEEEEEEE-EcCCceeEEEEeccCccCHHHHHHHHHHhcccC-CCceeeEeeEeeeC--CeeEEEE
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEEFINEVSTIGRIH-HVNVVQLLGFCSEG--SKRALVY 139 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~--~~~~lv~ 139 (373)
...|++.+++|+|-++.||.|. ..++++++||+++.-+ .+.+.+|+.+|..|. ||||++++++..+. ....+++
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF 114 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF 114 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence 3468889999999999999998 4578899999998643 467889999999997 99999999998664 4578999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC-CCceEEeeccCcccCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH-NFIPKVSDFGLAKFHP 218 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~-~~~~kl~Dfg~~~~~~ 218 (373)
||..+.+...+. ..++...+...+.++++||.|||+. ||.|||+||.|+++|. ...++|+|+|+|.+..
T Consensus 115 E~v~n~Dfk~ly-------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 115 EYVNNTDFKQLY-------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhhccccHHHHh-------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 999886665443 5577888999999999999999999 9999999999999995 5579999999999876
Q ss_pred CCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCcccccc-c-----hHHHHHH--
Q 048542 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAY-F-----PSWVYDQ-- 290 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~-~-----~~~~~~~-- 290 (373)
...++ +....+-.|--||.+-.- ..|+..-|+|||||++..|+..+.||.-......... + .+.....
T Consensus 185 p~~eY---nVRVASRyfKGPELLVdy-~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~ 260 (338)
T KOG0668|consen 185 PGKEY---NVRVASRYFKGPELLVDY-QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLN 260 (338)
T ss_pred CCcee---eeeeehhhcCCchheeec-hhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHH
Confidence 65533 334456667889988653 4677788999999999999999999975543321110 0 0001111
Q ss_pred -------------HhcCCCcccCc--cchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 291 -------------LNKGGDLELQN--VTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 291 -------------~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
+....+..... ..+-..-.++++.+|+.+.|..|-.+|||++|.+.
T Consensus 261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 11111100000 00000113478899999999999999999999864
No 397
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97 E-value=4.3e-33 Score=252.55 Aligned_cols=272 Identities=21% Similarity=0.278 Sum_probs=209.0
Q ss_pred CCccChhHHHHHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccCC------CceeeEe
Q 048542 54 PKRYSYPQIIAMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHH------VNVVQLL 126 (373)
Q Consensus 54 ~~~~~~~~i~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h------~ni~~~~ 126 (373)
..++.++++...+|.+....|+|-|++|.+|..+ .|+.||||+|+.+..-.+.-+.|+++|++|+. -|++.++
T Consensus 421 YYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~ 500 (752)
T KOG0670|consen 421 YYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLF 500 (752)
T ss_pred eEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence 3467788999999999999999999999999865 57899999999877666777899999999952 3789999
Q ss_pred eEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC-Cc
Q 048542 127 GFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FI 205 (373)
Q Consensus 127 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~-~~ 205 (373)
..|...+++|||+|-+ ..+|.+.+... ..+..+....+..++.|+.-||..|-.. +|+|.||||+|||+++. ..
T Consensus 501 r~F~hknHLClVFE~L-slNLRevLKKy-G~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~i 575 (752)
T KOG0670|consen 501 RHFKHKNHLCLVFEPL-SLNLREVLKKY-GRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNI 575 (752)
T ss_pred HHhhhcceeEEEehhh-hchHHHHHHHh-CcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcce
Confidence 9999999999999988 66888887544 3456688889999999999999999998 99999999999999865 56
Q ss_pred eEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchH
Q 048542 206 PKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPS 285 (373)
Q Consensus 206 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~ 285 (373)
+||||||.|........ +....+-.|.|||++.|. .|+...|+||+||.||||.||+-.|++..+...-.++.+
T Consensus 576 LKLCDfGSA~~~~enei----tPYLVSRFYRaPEIiLG~--~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me 649 (752)
T KOG0670|consen 576 LKLCDFGSASFASENEI----TPYLVSRFYRAPEIILGL--PYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFME 649 (752)
T ss_pred eeeccCccccccccccc----cHHHHHHhccCcceeecC--cccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHH
Confidence 89999999987654331 112244579999999986 788899999999999999999988887654432111100
Q ss_pred HH----HHHHhcCC--------Cc------------------------------ccCc---cchhhHHHHHHHHHHHHhh
Q 048542 286 WV----YDQLNKGG--------DL------------------------------ELQN---VTEIESMIARKLCMIGLWC 320 (373)
Q Consensus 286 ~~----~~~~~~~~--------~~------------------------------~~~~---~~~~~~~~~~~l~~li~~c 320 (373)
.. ...+.++. .+ .+.. .+.-.......+.+|+..|
T Consensus 650 ~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkm 729 (752)
T KOG0670|consen 650 LKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKM 729 (752)
T ss_pred hcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHH
Confidence 00 00011000 00 0000 1111233456799999999
Q ss_pred cCCCCCCCCCHHHHHH
Q 048542 321 IQVKAADRPSMTKVLE 336 (373)
Q Consensus 321 l~~dp~~Rps~~ell~ 336 (373)
|..||++|.|..+.|+
T Consensus 730 l~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 730 LILDPEKRITVNQALK 745 (752)
T ss_pred hccChhhcCCHHHHhc
Confidence 9999999999999876
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=4.3e-30 Score=220.53 Aligned_cols=210 Identities=35% Similarity=0.588 Sum_probs=180.6
Q ss_pred cCCCCcEEEEEEEEc-CCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCccc
Q 048542 73 LGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDR 149 (373)
Q Consensus 73 ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~~ 149 (373)
||+|++|.||++... +++.+++|++...... .+.+.+|+..++.++|++++++++++......++++|++++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999976 4889999999876553 5778999999999999999999999999899999999999899999
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC-CCceEEeeccCcccCCCCCCceeeec
Q 048542 150 HVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH-NFIPKVSDFGLAKFHPKENDFVSISA 228 (373)
Q Consensus 150 ~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~ 228 (373)
++.... ..+++..+..++.++++++.+||+. +++|+||+|.||+++. ++.++|+|||.+........ ....
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~ 152 (215)
T cd00180 81 LLKENE---GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKT 152 (215)
T ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhc
Confidence 884321 4688999999999999999999998 9999999999999998 89999999999986544321 1223
Q ss_pred ccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHH
Q 048542 229 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESM 308 (373)
Q Consensus 229 ~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (373)
..+...|++||..... ...+.+.|+|++|+++++|
T Consensus 153 ~~~~~~~~~pe~~~~~-~~~~~~~D~~~lg~~~~~l-------------------------------------------- 187 (215)
T cd00180 153 IVGTPAYMAPEVLLGK-GYYSEKSDIWSLGVILYEL-------------------------------------------- 187 (215)
T ss_pred ccCCCCccChhHhccc-CCCCchhhhHHHHHHHHHH--------------------------------------------
Confidence 4577889999988653 2567789999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 309 IARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 309 ~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 --~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 --PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred --HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 367889999999999999999999874
No 399
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.7e-31 Score=220.22 Aligned_cols=254 Identities=20% Similarity=0.281 Sum_probs=195.6
Q ss_pred HHHhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccC-CCceeeEeeE-eeeCCeeEEEEe
Q 048542 64 AMTNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIH-HVNVVQLLGF-CSEGSKRALVYE 140 (373)
Q Consensus 64 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~-~~~~~~~~lv~e 140 (373)
...|.+.+.+|+|.||.+-++.++ +++.+++|.+........+|.+|...--.|. |.||+..|++ |...+...+++|
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 346788899999999999999976 6788999999998888899999999877774 8999998875 455667788999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeee--CCCceEEeeccCcccCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD--HNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~--~~~~~kl~Dfg~~~~~~ 218 (373)
|++.|+|..-+. ...+.+.....++.|++.||.|+|++ ++||||||.+|||+. +..++||||||+.+..+
T Consensus 103 ~aP~gdL~snv~-----~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 103 FAPRGDLRSNVE-----AAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred cCccchhhhhcC-----cccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccC
Confidence 999999988772 23477888889999999999999998 999999999999995 34589999999987543
Q ss_pred CCCCceeeecccCCCCcccccccccc---cCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 219 KENDFVSISATRGTIGYIAPELISRN---FGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
.. ......+..|.+||..... .....+.+|+|.||+++|..++|+.||....... .+.|.+..+..+.
T Consensus 175 ~t-----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d----~~Y~~~~~w~~rk 245 (378)
T KOG1345|consen 175 TT-----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD----KPYWEWEQWLKRK 245 (378)
T ss_pred ce-----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC----chHHHHHHHhccc
Confidence 32 2233356778999976431 1234567899999999999999999998443322 2445555555555
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
....+. .-..++..+..+.++-+..+|++|=-..++-++
T Consensus 246 ~~~~P~---~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 246 NPALPK---KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred CccCch---hhcccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 444332 223456788889999999999999544444433
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-31 Score=245.28 Aligned_cols=252 Identities=22% Similarity=0.285 Sum_probs=198.0
Q ss_pred HhhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccC
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMP 143 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 143 (373)
.|++.+++|+|++|.||+++++ +++..|+|+++..... ..-+..|+-+++..+||||+.+++.+......++.||||.
T Consensus 16 dyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycg 95 (829)
T KOG0576|consen 16 DYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCG 95 (829)
T ss_pred chhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecC
Confidence 4677899999999999999965 7899999999876543 3566789999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
+|+|.+.-+ -..++++.++..+++...+|++|||+. +-+|||||-.|||+++.|.+|++|||.+..+...-
T Consensus 96 ggslQdiy~----~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati-- 166 (829)
T KOG0576|consen 96 GGSLQDIYH----VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATI-- 166 (829)
T ss_pred CCcccceee----ecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhh--
Confidence 999988763 356789999999999999999999998 88999999999999999999999999886443211
Q ss_pred eeeecccCCCCcccccccc-cccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCcc
Q 048542 224 VSISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNV 302 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~-~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (373)
.......||+.|||||+.. +..+.|.+++|+|++|+...|+---++|.....+ ......+.+. ....+..
T Consensus 167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp--------mr~l~LmTkS-~~qpp~l 237 (829)
T KOG0576|consen 167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP--------MRALFLMTKS-GFQPPTL 237 (829)
T ss_pred hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch--------HHHHHHhhcc-CCCCCcc
Confidence 1123567999999999863 3346788999999999999999877766543221 1122222221 1111111
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 303 TEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 303 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.+ ....+..+.++++.|+..+|++|||++.++.
T Consensus 238 kD-k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 238 KD-KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred cC-CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 11 1223567899999999999999999987653
No 401
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-30 Score=223.19 Aligned_cols=245 Identities=22% Similarity=0.268 Sum_probs=183.0
Q ss_pred hcccCCCCcEEEEEEEEc-CCceeEEEEeccCc---cCHHHHHHHHHHhcccCCCceeeEeeEeeeCC------eeEEEE
Q 048542 70 THKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSK---FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS------KRALVY 139 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~------~~~lv~ 139 (373)
.+.+|.|.- .|..+.+. .+++||+|...... ...++..+|..++..++|+||++++.++.-.. ..|+||
T Consensus 22 L~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~ 100 (369)
T KOG0665|consen 22 LKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVM 100 (369)
T ss_pred ecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHH
Confidence 366888888 56666543 68899999875432 23367789999999999999999999986543 478999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
|+| ..+|...+. -.+.-+.+..+..|++.|++|||+. +|+||||||+||++..+..+||.|||+++....
T Consensus 101 e~m-~~nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 101 ELM-DANLCQVIL------MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred Hhh-hhHHHHHHH------HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccCc
Confidence 999 568877773 3355678889999999999999998 999999999999999999999999999985433
Q ss_pred CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHH-----------
Q 048542 220 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVY----------- 288 (373)
Q Consensus 220 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~----------- 288 (373)
. ..++....|-.|.|||++.+. .+.+.+||||+||++.||++|+-.|.+.+. ++.|..
T Consensus 171 ~---~~mtpyVvtRyyrapevil~~--~~ke~vdiwSvGci~gEli~~~Vlf~g~d~------idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 171 D---FMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGELILGTVLFPGKDH------IDQWNKIIEQLGTPDPS 239 (369)
T ss_pred c---cccCchhheeeccCchheecc--CCcccchhhhhhhHHHHHhhceEEecCchH------HHHHHHHHHHhcCCCHH
Confidence 2 234445678899999999886 488899999999999999999988874432 111111
Q ss_pred ---H-------HHhcC------------CCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 289 ---D-------QLNKG------------GDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 289 ---~-------~~~~~------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
+ ..... .+..+....+.++--+.-+++|+.+||-.||++|.|++++|+
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 0 00000 000011111111122345789999999999999999999987
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.96 E-value=1.1e-29 Score=225.82 Aligned_cols=260 Identities=21% Similarity=0.293 Sum_probs=192.2
Q ss_pred HHhhhhcccCCCCcEEEEEEEEc----CCceeEEEEeccCccCHHHHHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEE
Q 048542 65 MTNHFTHKLGQGGFGSVYKGQLQ----TGGLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 65 ~~~~~~~~ig~G~~g~V~~~~~~----~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~ 139 (373)
..|...++||.|+|++||++... .+..||+|.+.... ...++.+|++.|..+ -+.||+++.+++..++...+|+
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl 114 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL 114 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence 35677799999999999999744 35689999887543 346788999999999 5899999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeee-CCCceEEeeccCcccCC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD-HNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~-~~~~~kl~Dfg~~~~~~ 218 (373)
||+++....++. ..++...+..++..+..||+++|.+ ||+||||||+|+|.+ ..+.-.|+|||++....
T Consensus 115 p~~~H~~f~~l~-------~~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d 184 (418)
T KOG1167|consen 115 PYFEHDRFRDLY-------RSLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYD 184 (418)
T ss_pred cccCccCHHHHH-------hcCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHHHH
Confidence 999998887776 3466788899999999999999999 999999999999998 55778999999997211
Q ss_pred CC---------------------------------CCcee---------eecccCCCCcccccccccccCCcCcccchHH
Q 048542 219 KE---------------------------------NDFVS---------ISATRGTIGYIAPELISRNFGTVSCKSDVYG 256 (373)
Q Consensus 219 ~~---------------------------------~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~s~~~Dvws 256 (373)
.. ..+.. -....||++|.|||++.+. +..+.++||||
T Consensus 185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~-~~QttaiDiws 263 (418)
T KOG1167|consen 185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRC-PRQTTAIDIWS 263 (418)
T ss_pred hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhc-cCcCCccceee
Confidence 00 00000 0022499999999999875 56788999999
Q ss_pred HHHHHHHHHcCCCCCCCCcCccccccc------hHHHHHHHh-cCC--------------------Cc---ccC------
Q 048542 257 FGMVLLEMAGGRRNSNMNATRSSKAYF------PSWVYDQLN-KGG--------------------DL---ELQ------ 300 (373)
Q Consensus 257 lG~~l~~ll~g~~p~~~~~~~~~~~~~------~~~~~~~~~-~~~--------------------~~---~~~------ 300 (373)
.|+++..+++++.||.....+.....- ...+.+... .+. .. ...
T Consensus 264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n 343 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN 343 (418)
T ss_pred ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence 999999999999999754432111000 000000000 000 00 000
Q ss_pred -ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 301 -NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 301 -~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
........++..+.+|+.+|+..||.+|.|+++.|+
T Consensus 344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred eeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 001111223457899999999999999999999986
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=1.5e-28 Score=213.81 Aligned_cols=197 Identities=33% Similarity=0.500 Sum_probs=167.4
Q ss_pred hhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc--CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 68 HFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
.+.+.||.|++|.||++... ++..+++|.+..... ..+.+.+|+..++.++|+|++++++++......++++|++++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~ 81 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG 81 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence 45688999999999999976 488999999987654 357888999999999999999999999998999999999999
Q ss_pred CCccccccCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCc
Q 048542 145 GSLDRHVFPKESRGQS-LCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 223 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~-l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 223 (373)
++|.+++... .. +++..+..++.+++.++.+||+. +++|+|++|+||+++.++.++|+|||.+.........
T Consensus 82 ~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 82 GDLFDYLRKK----GGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence 9999888432 22 78899999999999999999998 9999999999999999999999999998866543200
Q ss_pred eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCC
Q 048542 224 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNM 273 (373)
Q Consensus 224 ~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~ 273 (373)
......++..|++||.+. ....++.++|+|+||+++++|++|+.||..
T Consensus 155 -~~~~~~~~~~~~~pe~~~-~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 -LLKTVKGTPFYLAPEVLL-GGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred -cccceeccCCcCCHhHhc-CCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 112345778899999884 224677799999999999999999999964
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=2.5e-27 Score=198.67 Aligned_cols=166 Identities=23% Similarity=0.231 Sum_probs=124.2
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|+|.+++.. .+..+++..++.++.|++.||.|||+. + ||+||+++.++.+|+ ||++.......
T Consensus 1 GsL~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--- 63 (176)
T smart00750 1 VSLADILEV---RGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ--- 63 (176)
T ss_pred CcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc---
Confidence 577777732 245699999999999999999999987 5 999999999999999 99987654322
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
..||+.|+|||++.+. .++.++|||||||++|+|++|+.||....... ..... +.............
T Consensus 64 ----~~g~~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~p~~~~~~~~------~~~~~-~~~~~~~~~~~~~~ 130 (176)
T smart00750 64 ----SRVDPYFMAPEVIQGQ--SYTEKADIYSLGITLYEALDYELPYNEERELS------AILEI-LLNGMPADDPRDRS 130 (176)
T ss_pred ----CCCcccccChHHhcCC--CCcchhhHHHHHHHHHHHHhCCCCccccchhc------HHHHH-HHHHhccCCccccc
Confidence 2588999999999765 78889999999999999999999986543211 11111 11111111111111
Q ss_pred hhHHHHH--HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 305 IESMIAR--KLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 305 ~~~~~~~--~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
.+..++. .+.+++.+||+.+|.+||++.++++.+..
T Consensus 131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 131 NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 2233444 69999999999999999999999998764
No 405
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.1e-28 Score=205.08 Aligned_cols=249 Identities=21% Similarity=0.375 Sum_probs=194.1
Q ss_pred HhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCH---HHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
..++..+|.....|..|+|+++ |..++.|++.....+. .+|.+|.-.++.+.||||+++++.|.......++..||
T Consensus 191 ~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 3456678999999999999999 6667778876654433 68999999999999999999999999999999999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEe--eccCcccCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVS--DFGLAKFHPKE 220 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~--Dfg~~~~~~~~ 220 (373)
+.|||+..++. ..+......++.+++.++++|++|||+. ++-|.---+....+++|++.+++|+ |--.+.
T Consensus 270 p~gslynvlhe--~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsf----- 341 (448)
T KOG0195|consen 270 PFGSLYNVLHE--QTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSF----- 341 (448)
T ss_pred cchHHHHHHhc--CccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeee-----
Confidence 99999998853 3445566778899999999999999986 3334445688999999999887765 311111
Q ss_pred CCceeeecccCCCCcccccccccccCCcC-cccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 221 NDFVSISATRGTIGYIAPELISRNFGTVS-CKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~s-~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
...+..-.+.|++||.++....... .++|+|||++++|||.|...||.+..+-+ .+.+..+
T Consensus 342 ----qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspme--------------cgmkial 403 (448)
T KOG0195|consen 342 ----QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPME--------------CGMKIAL 403 (448)
T ss_pred ----eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchh--------------hhhhhhh
Confidence 1123346789999999987533333 35799999999999999999997655422 2222222
Q ss_pred C-ccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 300 Q-NVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 300 ~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
. ....+|+.++..+.+|+.-|++.||.+||.++.++-.||.+
T Consensus 404 eglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 404 EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 1 22355667788999999999999999999999999999875
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94 E-value=5.9e-28 Score=246.89 Aligned_cols=195 Identities=18% Similarity=0.205 Sum_probs=134.6
Q ss_pred cCC-CceeeEeeEe-------eeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCe
Q 048542 117 IHH-VNVVQLLGFC-------SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI 188 (373)
Q Consensus 117 l~h-~ni~~~~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~i 188 (373)
++| .||..++++| ......+.++|++ +++|.+++... ...+++..+..++.||++||.|||++ +|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP---DRSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc---cccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 445 5777777776 2334567788987 66999998432 35689999999999999999999998 99
Q ss_pred EecCcCCCCeeeeCCC-------------------ceEEeeccCcccCCCCCC--------------ceeeecccCCCCc
Q 048542 189 LHFDIKPHNILLDHNF-------------------IPKVSDFGLAKFHPKEND--------------FVSISATRGTIGY 235 (373)
Q Consensus 189 vH~dikp~Nil~~~~~-------------------~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~gt~~y 235 (373)
+||||||+|||++..+ .+|++|||+++....... ........||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 9999999999996544 455556665543211000 0001123578899
Q ss_pred ccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHH
Q 048542 236 IAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCM 315 (373)
Q Consensus 236 ~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 315 (373)
+|||.+.+. .++.++|||||||++|||++|..|+..... ....+....... .. .........
T Consensus 182 ~APE~~~~~--~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----------~~~~~~~~~~~~-----~~-~~~~~~~~~ 243 (793)
T PLN00181 182 TSPEEDNGS--SSNCASDVYRLGVLLFELFCPVSSREEKSR----------TMSSLRHRVLPP-----QI-LLNWPKEAS 243 (793)
T ss_pred EChhhhccC--CCCchhhhhhHHHHHHHHhhCCCchhhHHH----------HHHHHHHhhcCh-----hh-hhcCHHHHH
Confidence 999998764 688999999999999999998877542211 111111111000 00 011234568
Q ss_pred HHHhhcCCCCCCCCCHHHHHH
Q 048542 316 IGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 316 li~~cl~~dp~~Rps~~ell~ 336 (373)
++.+||+.+|.+|||+.|+++
T Consensus 244 ~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 244 FCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHhCCCChhhCcChHHHhh
Confidence 889999999999999999976
No 407
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=1.7e-25 Score=193.43 Aligned_cols=263 Identities=19% Similarity=0.271 Sum_probs=198.6
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEE-EcCCceeEEEEeccCccCHHHHHHHHHHhcccC-CCceeeEeeEeeeCCeeEEEE
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~ 139 (373)
+..-.|++.++||+|+||.++.|+ .-+++.||||.- ..+....++..|....+.|. .++|...|.+..++.+..+|+
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfE-PrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFE-PRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEec-cccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 344567889999999999999998 447999999954 44455577889999999985 689999999989999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC-----CCceEEeeccCc
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH-----NFIPKVSDFGLA 214 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~-----~~~~kl~Dfg~~ 214 (373)
|.+ |.||.|++ .-.++.++.+.+..++.|++.-++|+|++ .+|.|||||+|+||.. ...+.++|||+|
T Consensus 104 dLL-GPSLEDLF---D~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 104 DLL-GPSLEDLF---DLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhh-CcCHHHHH---HHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 998 77988877 34578899999999999999999999998 9999999999999963 345889999999
Q ss_pred ccCCCCCCce-----eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHH
Q 048542 215 KFHPKENDFV-----SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYD 289 (373)
Q Consensus 215 ~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~ 289 (373)
+.+.+..... .-....||.+||+-....|. ..+.+.|+-|||-++++.|.|..||..-...... ..++
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGr--EQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK-----~kYe 249 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGR--EQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNK-----EKYE 249 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccc--hhhhhhhHHHhhhhhhhhccCCCccccccCcchH-----HHHH
Confidence 9776554322 12345699999999988775 7788999999999999999999999865433211 1122
Q ss_pred HHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 290 QLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
.+... ...-...++-..++.++..-+...-+.+-.+-|..+-+...+...
T Consensus 250 KIGe~--Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dv 299 (449)
T KOG1165|consen 250 KIGET--KRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDV 299 (449)
T ss_pred Hhccc--cccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 22111 111112222234455566666666667777778877666555543
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=4.5e-25 Score=202.56 Aligned_cols=261 Identities=20% Similarity=0.225 Sum_probs=193.0
Q ss_pred HhhhhcccCCCCcEEEEEEEEcCC--ceeEEEEeccCccCH-HHHHHHHHHhcccCC----CceeeEeeEe-eeCCeeEE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQTG--GLIAVKMLENSKFSA-EEFINEVSTIGRIHH----VNVVQLLGFC-SEGSKRAL 137 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~~~--~~vaiK~~~~~~~~~-~~~~~e~~~l~~l~h----~ni~~~~~~~-~~~~~~~l 137 (373)
+|.+.++||+|+||.||.+..... ..+|+|......... ..+..|..++..+.. +++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 677889999999999999997643 478888876543221 267788888888862 5889999888 57788999
Q ss_pred EEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC-----CceEEeecc
Q 048542 138 VYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-----FIPKVSDFG 212 (373)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~-----~~~kl~Dfg 212 (373)
||+.+ |.+|.++..... ...++..++..++.|++.+|.++|+. |++||||||.|+++... ..+.|.|||
T Consensus 99 VM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 99998 789988764333 57799999999999999999999998 99999999999999754 468999999
Q ss_pred Ccc--cCCCCCC----ce-e-eecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccch
Q 048542 213 LAK--FHPKEND----FV-S-ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFP 284 (373)
Q Consensus 213 ~~~--~~~~~~~----~~-~-~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~ 284 (373)
+++ ....... .. . .....||..|.++.+..+. ..+.+.|+||++.++.+++.|..||...........
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~--e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~-- 248 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGI--EQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSK-- 248 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCC--ccCCchhhhhHHHHHHHHhcCCCCCccccccchHHH--
Confidence 998 3221111 01 1 1345699999999998875 778899999999999999999999965443221111
Q ss_pred HHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCCC
Q 048542 285 SWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSIDD 344 (373)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~~ 344 (373)
............ .....+..+.++...+-..+..++|....+...|+.....
T Consensus 249 --~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 249 --FEKDPRKLLTDR------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred --HHHHhhhhcccc------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 111111111100 0011234566666667779999999999999998776543
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=4.2e-25 Score=202.58 Aligned_cols=164 Identities=21% Similarity=0.214 Sum_probs=126.9
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEEEc--CCceeEEEEeccCc------cCHHHHHHHHHHhcccCCCceee-EeeEeeeC
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQLQ--TGGLIAVKMLENSK------FSAEEFINEVSTIGRIHHVNVVQ-LLGFCSEG 132 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~~~--~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~h~ni~~-~~~~~~~~ 132 (373)
.....|.+.+.||+|+||+||+|.++ +++.+|||++.... .....+.+|+++++.++|+|+++ ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 34556888899999999999999865 56778999865321 12356889999999999999885 4432
Q ss_pred CeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCc-CCCCeeeeCCCceEEeec
Q 048542 133 SKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDI-KPHNILLDHNFIPKVSDF 211 (373)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~di-kp~Nil~~~~~~~kl~Df 211 (373)
...++||||+++++|.. .. . .. ...++.++++||.|||+. ||+|||| ||+|||++.++.+||+||
T Consensus 91 ~~~~LVmE~~~G~~L~~-~~---~----~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHL-AR---P----HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred CCcEEEEEccCCCCHHH-hC---c----cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEEC
Confidence 45799999999999862 21 0 01 135788999999999998 9999999 999999999999999999
Q ss_pred cCcccCCCCCCcee------eecccCCCCccccccccc
Q 048542 212 GLAKFHPKENDFVS------ISATRGTIGYIAPELISR 243 (373)
Q Consensus 212 g~~~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~ 243 (373)
|++........... .....+++.|+|||.+..
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99987654332211 235568889999999854
No 410
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=5.4e-26 Score=221.63 Aligned_cols=252 Identities=21% Similarity=0.242 Sum_probs=188.4
Q ss_pred hhcccCCCCcEEEEEEEEc-CCceeEEEEecc---CccCH----HHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 69 FTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLEN---SKFSA----EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 69 ~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~---~~~~~----~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
....+|.|++|.|+..... .....+.|.... ..... ..+..|+.+-..++|+|++.....+.+.....-.||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 3467999999977777533 333344443321 11111 225567777888899999888777766555555599
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 220 (373)
||++ +|..++ .....+...++..++.|+..|+.|+|+. |+.|||+|++|+++..+|.+||+|||.+....-+
T Consensus 402 ~~~~-Dlf~~~----~~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 402 YCPY-DLFSLV----MSNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred cccH-HHHHHH----hcccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 9999 998888 3335688889999999999999999998 9999999999999999999999999999865444
Q ss_pred CCc--eeeecccCCCCcccccccccccCCcCc-ccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCc
Q 048542 221 NDF--VSISATRGTIGYIAPELISRNFGTVSC-KSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDL 297 (373)
Q Consensus 221 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~s~-~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (373)
.+. ....+.+|+..|+|||.+.+. .|.+ ..||||.|+++..|.+|+.||.......... .........-
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~--~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~------~~~~~~~~~~ 545 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGK--EYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF------KTNNYSDQRN 545 (601)
T ss_pred cchhhhhhcCcccCCcCcCccccccc--ccCcchhhhhhccceEEEEecCCCccccccccccch------hhhccccccc
Confidence 333 445677899999999999875 5544 5799999999999999999998665432211 1111112222
Q ss_pred ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 298 ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.......+...++.+.+.++.+||+.||.+|.|+++|++
T Consensus 546 ~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 546 IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 223334566777889999999999999999999999976
No 411
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=3.5e-25 Score=183.64 Aligned_cols=259 Identities=19% Similarity=0.258 Sum_probs=189.7
Q ss_pred HHHHhhhhcccCCCCcEEEEEEE-EcCCceeEEEEeccCccCHHHHHHHHHHhcccCC-CceeeEeeEeeeCCeeEEEEe
Q 048542 63 IAMTNHFTHKLGQGGFGSVYKGQ-LQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHH-VNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 63 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h-~ni~~~~~~~~~~~~~~lv~e 140 (373)
....|++.++||+|+||.+|.|. ..+|..||||+-.. ...-.++..|..+.+.|++ ..|+.+..+..+.....+||+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~-~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS-KAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecc-cCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 34578899999999999999998 55899999996543 3333567789999999975 678888888889999999999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC---CceEEeeccCcccC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN---FIPKVSDFGLAKFH 217 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~---~~~kl~Dfg~~~~~ 217 (373)
.+ |.||.+++.-. ...++.++++-++-|++.-++|+|.. +++||||||+|+|..-+ ..+.|+|||+++.+
T Consensus 92 LL-GPsLEdLfnfC---~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFC---SRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred cc-CccHHHHHHHH---hhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhh
Confidence 98 78998887433 45688999999999999999999998 99999999999999643 46889999999876
Q ss_pred CCCCCce-----eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHh
Q 048542 218 PKENDFV-----SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLN 292 (373)
Q Consensus 218 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~ 292 (373)
.+..... .-....||.+|.+-....+. ..+.+.|+-|+|.++.++..|..||.+...... ....+.+.
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~--eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk-----~QKyEkI~ 237 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGI--EQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK-----KQKYEKIS 237 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhh--hhhhhhhhhhhcceeeeeecCCCcccccchhhH-----HHHHHHHH
Confidence 5433221 12345699999988877654 567789999999999999999999986543221 11111111
Q ss_pred c-CCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 293 K-GGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 293 ~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
. ...... ..+=..++.++...+..|-..--++-|...-+-+.+.
T Consensus 238 EkK~s~~i---e~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 238 EKKMSTPI---EVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred HhhcCCCH---HHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 1 111110 0111223455666667777777777777655544443
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.90 E-value=2.8e-22 Score=183.75 Aligned_cols=261 Identities=28% Similarity=0.370 Sum_probs=195.2
Q ss_pred hhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccC----HHHHHHHHHHhcccCCC-ceeeEeeEeeeCCeeEEEEec
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS----AEEFINEVSTIGRIHHV-NVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~-ni~~~~~~~~~~~~~~lv~e~ 141 (373)
|.+.+.||.|+||.||++... ..+++|.+...... ...+.+|..++..+.|+ +++++.+.+......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 456688999999999999877 78899988764432 46788999999999988 799999999777778999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC-ceEEeeccCcccCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF-IPKVSDFGLAKFHPKE 220 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~-~~kl~Dfg~~~~~~~~ 220 (373)
+.++++.+.+...... ..+.......+..|++.++.|+|+. +++|||+||+||+++..+ .++++|||.+......
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999998655322111 3688999999999999999999998 999999999999999888 7999999999755433
Q ss_pred CCce----eeecccCCCCccccccccccc-CCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 221 NDFV----SISATRGTIGYIAPELISRNF-GTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 221 ~~~~----~~~~~~gt~~y~aPE~~~~~~-~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
.... ......|+..|+|||.+.+.. ...+...|+||+|++++++++|..||...... .........+....
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~ 231 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS----SATSQTLKIILELP 231 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc----ccHHHHHHHHHhcC
Confidence 3211 235567999999999987631 36777899999999999999999996554431 00111222222222
Q ss_pred Cc--ccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 048542 296 DL--ELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEM 337 (373)
Q Consensus 296 ~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 337 (373)
.. ...............+.+++..|+..+|..|.+..+....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 232 TPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred CcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11 0000000002223568899999999999999999887764
No 413
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.90 E-value=2e-24 Score=211.76 Aligned_cols=252 Identities=22% Similarity=0.276 Sum_probs=181.2
Q ss_pred HhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCc--cCHHHH---HHHHHHhcccCCCceeeEeeEeeeCCeeEEEEe
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSK--FSAEEF---INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYE 140 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~--~~~~~~---~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 140 (373)
.+.+.+.||++.|=+|.+|+++.|. |+||++-+.. .+.+.+ +.|++ ...+++||.+++.-+...+...|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 3456688999999999999988666 8999875533 222333 44555 555689999999888788888899999
Q ss_pred ccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc--CC
Q 048542 141 YMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF--HP 218 (373)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~--~~ 218 (373)
|..+ +|+|.+ ..+.-+...+..-|+.|++.|+..+|.. ||+|||||.+|||++.-+-+.|+||..-+. +.
T Consensus 102 yvkh-nLyDRl----STRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 102 YVKH-NLYDRL----STRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred HHhh-hhhhhh----ccchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCC
Confidence 9855 898888 4455677788889999999999999998 999999999999999999999999987653 22
Q ss_pred CCC--Cce-eeecccCCCCccccccccccc---------CCcCcccchHHHHHHHHHHHc-CCCCCCCCcCccccccchH
Q 048542 219 KEN--DFV-SISATRGTIGYIAPELISRNF---------GTVSCKSDVYGFGMVLLEMAG-GRRNSNMNATRSSKAYFPS 285 (373)
Q Consensus 219 ~~~--~~~-~~~~~~gt~~y~aPE~~~~~~---------~~~s~~~DvwslG~~l~~ll~-g~~p~~~~~~~~~~~~~~~ 285 (373)
.++ ++. .......-.+|.|||.+.... ...+++.||||+||++.||++ |++||...+--.++
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr----- 248 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYR----- 248 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHh-----
Confidence 221 111 122333446899999874321 125678899999999999998 56777643321111
Q ss_pred HHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcC
Q 048542 286 WVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 341 (373)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~ 341 (373)
.+...... .-...--...+++|+..|++.||++|.|+++.|+--.|.
T Consensus 249 -------~~~~~~~e--~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 249 -------SGNADDPE--QLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred -------ccCccCHH--HHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 11000000 000011124789999999999999999999999986654
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.89 E-value=3.1e-23 Score=175.12 Aligned_cols=138 Identities=17% Similarity=0.176 Sum_probs=107.4
Q ss_pred hcccCCCCcEEEEEEEEcCCceeEEEEeccCccCH---------------------------HHHHHHHHHhcccCCCce
Q 048542 70 THKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSA---------------------------EEFINEVSTIGRIHHVNV 122 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~---------------------------~~~~~e~~~l~~l~h~ni 122 (373)
...||+|+||.||+|...+|+.||+|+++...... .....|+..+..+.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 36799999999999998889999999997642210 112349999999987776
Q ss_pred eeEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HcCCCCCeEecCcCCCCeeee
Q 048542 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL-HNGCDVCILHFDIKPHNILLD 201 (373)
Q Consensus 123 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~L-H~~~~~~ivH~dikp~Nil~~ 201 (373)
.....+.. ...++||||++++++..... ....++...+..++.|++.+|.++ |+. +++||||||+||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~----~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL----KDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh----hcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence 43332222 22389999998876654431 235688899999999999999999 687 999999999999998
Q ss_pred CCCceEEeeccCcccC
Q 048542 202 HNFIPKVSDFGLAKFH 217 (373)
Q Consensus 202 ~~~~~kl~Dfg~~~~~ 217 (373)
++.++|+|||++...
T Consensus 153 -~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 -DGKLYIIDVSQSVEH 167 (190)
T ss_pred -CCcEEEEEccccccC
Confidence 478999999999754
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.88 E-value=5.5e-23 Score=175.69 Aligned_cols=172 Identities=14% Similarity=0.132 Sum_probs=130.9
Q ss_pred HHHHHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHH----------HHHHHHHhcccCCCceeeEeeEee
Q 048542 61 QIIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE----------FINEVSTIGRIHHVNVVQLLGFCS 130 (373)
Q Consensus 61 ~i~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~----------~~~e~~~l~~l~h~ni~~~~~~~~ 130 (373)
++...+|+..+.+|.|+||.||+... +++.+|+|++.......+. +.+|+..+.++.|++|..+.+++.
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 44556788889999999999999766 5778999999765433322 578899999999999999988865
Q ss_pred eC--------CeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC
Q 048542 131 EG--------SKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH 202 (373)
Q Consensus 131 ~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~ 202 (373)
.. ...+++|||++|.+|.+.. .++. ....+++.++..+|+. |++|||++|+||+++.
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~--------~~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~ 170 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMP--------EISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSK 170 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhh--------hccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeC
Confidence 33 3578999999999997653 1222 2456899999999998 9999999999999998
Q ss_pred CCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHH
Q 048542 203 NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265 (373)
Q Consensus 203 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll 265 (373)
++ ++|+|||........... ....... .+..++|+||||+.+..+.
T Consensus 171 ~g-i~liDfg~~~~~~e~~a~--------------d~~vler--~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 171 NG-LRIIDLSGKRCTAQRKAK--------------DRIDLER--HYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CC-EEEEECCCcccccchhhH--------------HHHHHHh--HhcccccccceeEeehHHH
Confidence 88 999999987644222110 0022222 4557899999999887664
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.88 E-value=3.6e-22 Score=169.21 Aligned_cols=140 Identities=20% Similarity=0.186 Sum_probs=110.0
Q ss_pred hcccCCCCcEEEEEEEEcCCceeEEEEeccCccC---------------------------HHHHHHHHHHhcccCCCce
Q 048542 70 THKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS---------------------------AEEFINEVSTIGRIHHVNV 122 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~e~~~l~~l~h~ni 122 (373)
...||+|++|.||+|...+|+.||||+++..... ......|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3679999999999999778999999998764211 1123578899999999887
Q ss_pred eeEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEecCcCCCCeeee
Q 048542 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN-GCDVCILHFDIKPHNILLD 201 (373)
Q Consensus 123 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~-~~~~~ivH~dikp~Nil~~ 201 (373)
.....+... ..++||||++++++..... ....++......++.|++.++.++|+ . |++||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l----~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL----KDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhh----hhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 544443332 2489999998875543321 12457788889999999999999999 7 999999999999998
Q ss_pred CCCceEEeeccCcccCCC
Q 048542 202 HNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 202 ~~~~~kl~Dfg~~~~~~~ 219 (373)
++.++|+|||++.....
T Consensus 153 -~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 -DGKPYIIDVSQAVELDH 169 (190)
T ss_pred -CCCEEEEEcccceecCC
Confidence 88999999999976543
No 417
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.88 E-value=2.6e-22 Score=187.49 Aligned_cols=219 Identities=21% Similarity=0.350 Sum_probs=167.8
Q ss_pred hcccCCCceeeEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCe-EecC
Q 048542 114 IGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCI-LHFD 192 (373)
Q Consensus 114 l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~i-vH~d 192 (373)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+.. ....+++.....++.+++.||+|||+. .+ .|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeee
Confidence 4678899999999999999999999999999999999954 356788999999999999999999987 44 9999
Q ss_pred cCCCCeeeeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccc--cC---CcCcccchHHHHHHHHHHHcC
Q 048542 193 IKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN--FG---TVSCKSDVYGFGMVLLEMAGG 267 (373)
Q Consensus 193 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~---~~s~~~DvwslG~~l~~ll~g 267 (373)
+++.|++++....+||+|||+.................-..-|.|||.+.+. .. ..+.+.|+||||++++|+++.
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred eccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 9999999999999999999998766432111222222344579999998653 11 146789999999999999999
Q ss_pred CCCCCCCcCccccccchHHHHHHHhc-CCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCCC
Q 048542 268 RRNSNMNATRSSKAYFPSWVYDQLNK-GGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSID 343 (373)
Q Consensus 268 ~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~~ 343 (373)
..||......... ..+...+.+ +.....+...... .....+..++.+||..+|.+||+++++-..++...+
T Consensus 155 ~~~~~~~~~~~~~----~eii~~~~~~~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 155 SGPFDLRNLVEDP----DEIILRVKKGGSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cCccccccccCCh----HHHHHHHHhcCCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 9999875544332 222223333 2222222222221 344478999999999999999999999999987655
No 418
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.87 E-value=5.1e-22 Score=174.82 Aligned_cols=232 Identities=21% Similarity=0.271 Sum_probs=147.0
Q ss_pred hhcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccC----------CCceeeEeeEee---
Q 048542 69 FTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIH----------HVNVVQLLGFCS--- 130 (373)
Q Consensus 69 ~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~----------h~ni~~~~~~~~--- 130 (373)
..+.||.|+++.||.+++. +|+.+|+|+...... ..+++.+|.-....+. |-.++..++...
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 3478999999999999977 689999998754332 2356666665555432 112222222221
Q ss_pred ------eC---C-----eeEEEEeccCcCCccccccC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCc
Q 048542 131 ------EG---S-----KRALVYEYMPNGSLDRHVFP---KESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDI 193 (373)
Q Consensus 131 ------~~---~-----~~~lv~e~~~~gsL~~~l~~---~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~di 193 (373)
.. . ..+++|+-+ .++|.+.+.. .......+.......+..|+++.+++||+. |++|+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-
T ss_pred CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEeccc
Confidence 11 1 235678877 5577766521 122122344455567778999999999998 9999999
Q ss_pred CCCCeeeeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccc------cCCcCcccchHHHHHHHHHHHcC
Q 048542 194 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN------FGTVSCKSDVYGFGMVLLEMAGG 267 (373)
Q Consensus 194 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~s~~~DvwslG~~l~~ll~g 267 (373)
+|+|++++.+|.++|+||+.....+.. . .....+..|.+||..... .-.++.+.|.|++|+++|.|.++
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~---~--~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTR---Y--RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEE---E--EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCce---e--eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 999999999999999999887654321 1 113355779999976432 12467889999999999999999
Q ss_pred CCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCC
Q 048542 268 RRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADR 328 (373)
Q Consensus 268 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 328 (373)
..||+.......... .+ .... +++..++.|+..+|+.||.+|
T Consensus 247 ~lPf~~~~~~~~~~~---------------~f---~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADPEW---------------DF---SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTSGG---------------GG---TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccccc---------------cc---hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 999987654332211 11 1222 567789999999999999988
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=4.2e-21 Score=160.71 Aligned_cols=188 Identities=15% Similarity=0.104 Sum_probs=139.1
Q ss_pred hhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHH-----HHHHHHHHhcccC-CCceeeEeeEeeeCCeeEEEEecc
Q 048542 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAE-----EFINEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 69 ~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~-----~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
....|++|+||+|+.+.. .+.+++.+.+.....-.. .+.+|+++|++++ |++++.++++ ...+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 357799999999997765 578888887776554322 5789999999995 5789999886 3469999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCc-CCCCeeeeCCCceEEeeccCcccCCCCC
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDI-KPHNILLDHNFIPKVSDFGLAKFHPKEN 221 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~di-kp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 221 (373)
.|.+|..... . . ...++.|++.++.++|+. ||+|||| ||+|||++.++.++|+|||++.......
T Consensus 81 ~G~~L~~~~~----~------~-~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 81 AGAAMYQRPP----R------G-DLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred cCccHHhhhh----h------h-hHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 9988854320 0 1 134678899999999998 9999999 7999999999999999999998554333
Q ss_pred Cc----e--e-----eecccCCCCcccccccccccCCcC-cccchHHHHHHHHHHHcCCCCCCCCcC
Q 048542 222 DF----V--S-----ISATRGTIGYIAPELISRNFGTVS-CKSDVYGFGMVLLEMAGGRRNSNMNAT 276 (373)
Q Consensus 222 ~~----~--~-----~~~~~gt~~y~aPE~~~~~~~~~s-~~~DvwslG~~l~~ll~g~~p~~~~~~ 276 (373)
.. . . ......++.|++|+...-. ...+ .+.++++-|+-+|.++|++.+...+..
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l-~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVL-KRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhh-ccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 11 0 0 0012267778888754221 1222 456999999999999999988765443
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=1.3e-21 Score=173.30 Aligned_cols=200 Identities=17% Similarity=0.203 Sum_probs=138.2
Q ss_pred CCCceeeEeeEeee---------------------------CCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHH
Q 048542 118 HHVNVVQLLGFCSE---------------------------GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVA 170 (373)
Q Consensus 118 ~h~ni~~~~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~ 170 (373)
+||||+.+.++|.+ +...|+||..++ .+|..++..+ ..+.....-++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~-----~~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR-----HRSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC-----CCchHHHHHHH
Confidence 59999999887632 224689998884 4898888532 24455667789
Q ss_pred HHHHHHHHHHHcCCCCCeEecCcCCCCeeee--CCC--ceEEeeccCcccCCCCC---Ccee-eecccCCCCcccccccc
Q 048542 171 LGTARGIEYLHNGCDVCILHFDIKPHNILLD--HNF--IPKVSDFGLAKFHPKEN---DFVS-ISATRGTIGYIAPELIS 242 (373)
Q Consensus 171 ~~i~~al~~LH~~~~~~ivH~dikp~Nil~~--~~~--~~kl~Dfg~~~~~~~~~---~~~~-~~~~~gt~~y~aPE~~~ 242 (373)
.|+++|+.|||.+ |+.|||+|.+|||+. +++ .++++|||++--..... .+.+ ....-|.-..||||+..
T Consensus 348 aQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 9999999999998 999999999999994 333 57899999875322211 1111 11223677889999986
Q ss_pred cccCCc----CcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHH
Q 048542 243 RNFGTV----SCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGL 318 (373)
Q Consensus 243 ~~~~~~----s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 318 (373)
...|.. -.|+|.|+.|.+.||+++..+||.....-- ++.-. .... + ....+..++..+++|+.
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~----L~~r~---Yqe~---q---LPalp~~vpp~~rqlV~ 491 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML----LDTRT---YQES---Q---LPALPSRVPPVARQLVF 491 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe----echhh---hhhh---h---CCCCcccCChHHHHHHH
Confidence 543332 137999999999999999999998633210 00000 0111 1 12233445667899999
Q ss_pred hhcCCCCCCCCCHHHHHHHHh
Q 048542 319 WCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 319 ~cl~~dp~~Rps~~ell~~L~ 339 (373)
..|+.||++|++..-....|+
T Consensus 492 ~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 492 DLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHhcCCccccCCccHHHhHHH
Confidence 999999999999876666554
No 421
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=3.1e-20 Score=185.28 Aligned_cols=248 Identities=20% Similarity=0.200 Sum_probs=176.5
Q ss_pred HHHHHhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccC---CCceeeEeeEeeeCCeeEEE
Q 048542 62 IIAMTNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIH---HVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 62 i~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~---h~ni~~~~~~~~~~~~~~lv 138 (373)
+-...+.+.+.||+|+||+||+|...+|+.||+|+-+....- +|.--.+++.+|+ -+.|..+...+.-.+.-++|
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W--EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv 772 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW--EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV 772 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce--eeeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence 334556777899999999999999888999999987664321 1111122222332 23455555555556677899
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeee-------CCCceEEeec
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD-------HNFIPKVSDF 211 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~-------~~~~~kl~Df 211 (373)
+||.+.|+|.+++. ..+.+++..+..++.|++..+.+||.. +|||+||||+|+++. ...-++|+||
T Consensus 773 ~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf 845 (974)
T KOG1166|consen 773 SEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDF 845 (974)
T ss_pred eeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEec
Confidence 99999999999994 456688999999999999999999998 999999999999994 2345899999
Q ss_pred cCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHH
Q 048542 212 GLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQL 291 (373)
Q Consensus 212 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~ 291 (373)
|.+--+.--.........++|-.+--+|+..|. .++...|.|.++.+++-||.|+.-- .
T Consensus 846 G~siDm~lfp~~~~F~~~~~td~f~C~EM~~gr--pWtYq~DyfGlAa~~h~mLFG~y~q-------------------~ 904 (974)
T KOG1166|consen 846 GRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGR--PWTYQIDYFGLAATVHVMLFGKYME-------------------V 904 (974)
T ss_pred ccceeeeEcCCCcEEeeeeccccchhHHHhcCC--CCchhhhhHHHHHHHHHHHHHHHHH-------------------h
Confidence 998754333333445677789999999999886 8899999999999999999997311 2
Q ss_pred hcCCCcccCc-cch-hhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcCC
Q 048542 292 NKGGDLELQN-VTE-IESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSI 342 (373)
Q Consensus 292 ~~~~~~~~~~-~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~~~ 342 (373)
..+....... ... ..++++.. +...+|+.|-..=|...++...+++.+
T Consensus 905 ~~g~~~~~~~~~~Ry~~~~~W~~---~F~~lLN~~~~~~p~l~~lr~~~~~~~ 954 (974)
T KOG1166|consen 905 KNGSSWMVKTNFPRYWKRDMWNK---FFDLLLNPDCDTLPNLQELRTELEEVL 954 (974)
T ss_pred cCCcceeccccchhhhhHHHHHH---HHHHHhCcCcccchhHHHHHHHHHHHH
Confidence 2222222111 111 12333444 444455566666688888887777653
No 422
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.83 E-value=1.3e-21 Score=183.03 Aligned_cols=231 Identities=23% Similarity=0.253 Sum_probs=179.9
Q ss_pred cCCCCcEEEEEEE----EcCCceeEEEEeccCccCH---HHHHHHHHHhcccC-CCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 73 LGQGGFGSVYKGQ----LQTGGLIAVKMLENSKFSA---EEFINEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 73 ig~G~~g~V~~~~----~~~~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+|.|+||.|++++ ...|..+|+|..++..... .....|..++...+ ||.+++++..+..+...+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 7999999999875 2356778998876532211 13456777888886 99999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCce
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 224 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 224 (373)
|.|...+ .+...+.+.........++-++.++|+. +++|||+|++||+++.+|++++.|||+++..-...
T Consensus 82 g~lft~l----~~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~--- 151 (612)
T KOG0603|consen 82 GDLFTRL----SKEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK--- 151 (612)
T ss_pred chhhhcc----ccCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhh---
Confidence 9987766 3345566777777888899999999998 99999999999999999999999999988543322
Q ss_pred eeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccch
Q 048542 225 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTE 304 (373)
Q Consensus 225 ~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
..+||..|||||++.+ ....+|.||||++.++|++|..||.. +.....+.. ...
T Consensus 152 ---~~cgt~eymApEI~~g----h~~a~D~ws~gvl~felltg~~pf~~-----------~~~~~Il~~--------~~~ 205 (612)
T KOG0603|consen 152 ---IACGTYEYRAPEIING----HLSAADWWSFGVLAFELLTGTLPFGG-----------DTMKRILKA--------ELE 205 (612)
T ss_pred ---hcccchhhhhhHhhhc----cCCcccchhhhhhHHHHhhCCCCCch-----------HHHHHHhhh--------ccC
Confidence 1279999999999963 35578999999999999999999875 111111111 123
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCH--HHHHHHHh
Q 048542 305 IESMIARKLCMIGLWCIQVKAADRPSM--TKVLEMLE 339 (373)
Q Consensus 305 ~~~~~~~~l~~li~~cl~~dp~~Rps~--~ell~~L~ 339 (373)
.++..+..+.+++.+++..+|..|.-. ..+.+..+
T Consensus 206 ~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~ 242 (612)
T KOG0603|consen 206 MPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQ 242 (612)
T ss_pred CchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhc
Confidence 456778889999999999999999866 44544444
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.83 E-value=8.3e-20 Score=159.43 Aligned_cols=139 Identities=17% Similarity=0.144 Sum_probs=108.7
Q ss_pred hhhhcccCCCCcEEEEEEE--EcCCceeEEEEeccCccC-------------------------HHHHHHHHHHhcccCC
Q 048542 67 NHFTHKLGQGGFGSVYKGQ--LQTGGLIAVKMLENSKFS-------------------------AEEFINEVSTIGRIHH 119 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~--~~~~~~vaiK~~~~~~~~-------------------------~~~~~~e~~~l~~l~h 119 (373)
|.+.+.||+|++|.||+|. ..+|+.||+|+++..... ...+..|+..+.++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 5677999999999999998 458999999998754210 0234679999999975
Q ss_pred C--ceeeEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC-eEecCcCCC
Q 048542 120 V--NVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC-ILHFDIKPH 196 (373)
Q Consensus 120 ~--ni~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~-ivH~dikp~ 196 (373)
. .+++++++ ...++||||+++++|..... .........+..++.|++.++.+||+. + ++||||||+
T Consensus 110 ~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~ 178 (237)
T smart00090 110 AGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL----KDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEY 178 (237)
T ss_pred cCCCCCeeeEe----cCceEEEEEecCCccccccc----ccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChh
Confidence 3 34444443 23589999999988866542 223455666788999999999999998 8 999999999
Q ss_pred CeeeeCCCceEEeeccCcccC
Q 048542 197 NILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 197 Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
||+++ ++.++|+|||.+...
T Consensus 179 NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 179 NILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hEEEE-CCCEEEEEChhhhcc
Confidence 99999 889999999998754
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.82 E-value=7.8e-20 Score=155.87 Aligned_cols=132 Identities=17% Similarity=0.221 Sum_probs=101.9
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCcc-CHHHHHHHHHHhccc-----CCCceeeEeeEeeeCC---eeE-EEEe
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKF-SAEEFINEVSTIGRI-----HHVNVVQLLGFCSEGS---KRA-LVYE 140 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~---~~~-lv~e 140 (373)
+.||+|+||.||. ++.....+||++..... ..+.+.+|+.+++.+ .||||+++++++.++. ..+ +|+|
T Consensus 8 ~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e 85 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD 85 (210)
T ss_pred ceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence 6799999999996 44333447998876432 346789999999999 5799999999998763 333 7899
Q ss_pred c--cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHcCCCCCeEecCcCCCCeeeeC----CCceEEeeccC
Q 048542 141 Y--MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGI-EYLHNGCDVCILHFDIKPHNILLDH----NFIPKVSDFGL 213 (373)
Q Consensus 141 ~--~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al-~~LH~~~~~~ivH~dikp~Nil~~~----~~~~kl~Dfg~ 213 (373)
| +.+++|.+++.. ..+++. ..++.+++.++ +|||++ +|+||||||+|||++. ++.++|+||+-
T Consensus 86 ~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 86 FDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred CCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 9 557999999932 235544 34577777777 999998 9999999999999974 34799999543
Q ss_pred c
Q 048542 214 A 214 (373)
Q Consensus 214 ~ 214 (373)
+
T Consensus 156 ~ 156 (210)
T PRK10345 156 E 156 (210)
T ss_pred C
Confidence 3
No 425
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.78 E-value=1.3e-18 Score=148.65 Aligned_cols=134 Identities=21% Similarity=0.191 Sum_probs=106.2
Q ss_pred hhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccC-----------------------HHHHHHHHHHhcccCCCc--
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS-----------------------AEEFINEVSTIGRIHHVN-- 121 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-----------------------~~~~~~e~~~l~~l~h~n-- 121 (373)
|.+.+.||+|+||.||++...+|+.+|||+++..... ......|+..+..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 6677899999999999999888999999987653211 123567888888887774
Q ss_pred eeeEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeee
Q 048542 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD 201 (373)
Q Consensus 122 i~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~ 201 (373)
++..++ ....+++|||+++++|..... . .....++.+++.++.++|+. +++|+||||+||+++
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~------~----~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~ 159 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRV------L----EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVD 159 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhccc------c----ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEc
Confidence 444443 234589999999998866541 0 23457888999999999998 999999999999999
Q ss_pred CCCceEEeeccCcccC
Q 048542 202 HNFIPKVSDFGLAKFH 217 (373)
Q Consensus 202 ~~~~~kl~Dfg~~~~~ 217 (373)
.++.++|+|||++...
T Consensus 160 ~~~~~~liDfg~~~~~ 175 (198)
T cd05144 160 DDEKIYIIDWPQMVST 175 (198)
T ss_pred CCCcEEEEECCccccC
Confidence 9999999999998644
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=1.3e-18 Score=150.23 Aligned_cols=133 Identities=21% Similarity=0.286 Sum_probs=111.1
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccC---------HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS---------AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~---------~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
+.||+|++|.||+|.. +|..+++|........ ...+.+|+.++..+.|+++.....++.+....+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5789999999999987 5788999976543221 13577899999999999888777777777788999999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
++|++|.+.+... .. ....++.+++.++.++|+. +++|+|++|.||+++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999998887321 12 6788999999999999998 999999999999999 78999999998864
No 427
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.76 E-value=3.5e-18 Score=146.07 Aligned_cols=129 Identities=22% Similarity=0.317 Sum_probs=103.7
Q ss_pred ccCCCCcEEEEEEEEcCCceeEEEEeccCcc---------CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEecc
Q 048542 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKF---------SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 72 ~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 142 (373)
.||+|+||.||+|.+. +..+++|....... ...++.+|+.++..++|+++.....++......+++|||+
T Consensus 1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 3899999999999854 78899998654221 1245678999999998887655555555666779999999
Q ss_pred CcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 143 PNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
+|++|.+.+... .. .++.+++.+|.+||+. +++|+|++|.||+++ ++.++++|||++..
T Consensus 80 ~g~~l~~~~~~~----~~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEG----ND-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhc----HH-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999998876221 10 7899999999999998 999999999999999 88999999998864
No 428
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.76 E-value=5.7e-19 Score=173.56 Aligned_cols=209 Identities=21% Similarity=0.204 Sum_probs=139.1
Q ss_pred hhhhcccCCCCcEEEEEEEEc-CCceeEEEEeccCccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
++.++.|..|++|.||..+++ +.+.+|+|+-+. +.- .+. ++....+|.++ |
T Consensus 85 f~~IklisngAygavylvrh~~trqrfa~kiNkq-~li----lRn--ilt~a~npfvv---------------------g 136 (1205)
T KOG0606|consen 85 FNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQ-NLI----LRN--ILTFAGNPFVV---------------------G 136 (1205)
T ss_pred cceeEeeccCCCCceeeeeccccccchhhccccc-chh----hhc--cccccCCccee---------------------c
Confidence 344588999999999999877 567888854332 211 010 12222233322 2
Q ss_pred CccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCC----
Q 048542 146 SLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN---- 221 (373)
Q Consensus 146 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 221 (373)
+-...+ ..-++++... +.+++|||+. +|+|||+||+|.++..-|++|++|||++.......
T Consensus 137 Dc~tll----k~~g~lPvdm--------vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl 201 (1205)
T KOG0606|consen 137 DCATLL----KNIGPLPVDM--------VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNL 201 (1205)
T ss_pred hhhhhc----ccCCCCcchh--------hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchh
Confidence 222222 1123343332 6789999998 99999999999999999999999999986432110
Q ss_pred ---------CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHh
Q 048542 222 ---------DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLN 292 (373)
Q Consensus 222 ---------~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~ 292 (373)
....-...+||+.|.|||++..+ .|+..+|+|++|+++|+.+.|..||.....++-. ..+-
T Consensus 202 ~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrq--gygkpvdwwamGiIlyeFLVgcvpffGdtpeelf--------g~vi 271 (1205)
T KOG0606|consen 202 KEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQ--GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF--------GQVI 271 (1205)
T ss_pred hhcchHHHHHHhhhccccCCccccChhhhhhh--ccCCCccHHHHHHHHHHHheeeeeccCCCHHHHH--------hhhh
Confidence 00112345799999999999876 7888999999999999999999999887654321 1111
Q ss_pred cCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHH
Q 048542 293 KGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMT 332 (373)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 332 (373)
......... ...+..++++++.+.|+.+|.+|.-..
T Consensus 272 sd~i~wpE~----dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 272 SDDIEWPEE----DEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred hhhcccccc----CcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 111111111 123356789999999999999996433
No 429
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.75 E-value=4.7e-19 Score=162.96 Aligned_cols=173 Identities=21% Similarity=0.284 Sum_probs=129.2
Q ss_pred eeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccC
Q 048542 134 KRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGL 213 (373)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~ 213 (373)
.+|+.|++|...+|.+++..++ .....++.....++.|++.|+.| + +.+|+|+||.||++..+..+||.|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~-~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRR-TGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCC-cccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 4789999999999999996543 35567788899999999999999 5 899999999999999999999999999
Q ss_pred cccCCCCC----CceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcC-CCCCCCCcCccccccchHHHH
Q 048542 214 AKFHPKEN----DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG-RRNSNMNATRSSKAYFPSWVY 288 (373)
Q Consensus 214 ~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g-~~p~~~~~~~~~~~~~~~~~~ 288 (373)
........ .....+...||..||+||.+.++ .|+.|+||||||++|+||+.- ..++. .....
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~--~y~~kvdIyaLGlil~EL~~~f~T~~e-----------r~~t~ 469 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQ--QYSEKVDIYALGLILAELLIQFSTQFE-----------RIATL 469 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhh--hhhhhcchhhHHHHHHHHHHHhccHHH-----------HHHhh
Confidence 88665443 22334556799999999999886 899999999999999999972 21111 01122
Q ss_pred HHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHH
Q 048542 289 DQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMT 332 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 332 (373)
..++.+..++ ....+++ .-..|+.+++...|.+||++.
T Consensus 470 ~d~r~g~ip~-----~~~~d~p-~e~~ll~~lls~~p~~RP~~~ 507 (516)
T KOG1033|consen 470 TDIRDGIIPP-----EFLQDYP-EEYTLLQQLLSPSPEERPSAI 507 (516)
T ss_pred hhhhcCCCCh-----HHhhcCc-HHHHHHHHhcCCCcccCchHH
Confidence 2233332221 1111112 235889999999999999443
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.75 E-value=6.6e-18 Score=165.37 Aligned_cols=132 Identities=19% Similarity=0.255 Sum_probs=107.1
Q ss_pred hhhcccCCCCcEEEEEEEEcCCceeEEEE-eccCcc--------CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEE
Q 048542 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKM-LENSKF--------SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~~~~~~vaiK~-~~~~~~--------~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 138 (373)
...+.||+|+||.||+|.+.... +++|. +..... ..+++.+|+++++.++|++++....++......++|
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv 414 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIV 414 (535)
T ss_pred CccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEE
Confidence 34688999999999999876443 44443 222111 124678999999999999998887777777778999
Q ss_pred EeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 139 YEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
|||+++++|.+++. ....++.+++.+|.+||+. +++|||+||+||++ .++.++|+|||++..
T Consensus 415 ~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 415 MEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999988772 3467899999999999998 99999999999999 577999999999874
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.71 E-value=2.5e-17 Score=139.36 Aligned_cols=135 Identities=20% Similarity=0.221 Sum_probs=96.9
Q ss_pred hcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHH---HH----------------------HHHHHHhcccCCC--ce
Q 048542 70 THKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAE---EF----------------------INEVSTIGRIHHV--NV 122 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~---~~----------------------~~e~~~l~~l~h~--ni 122 (373)
.+.||+|+||.||+|...+++.||||+++....... .. ..|...+..+.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 467999999999999988899999999876432211 11 2455555555433 24
Q ss_pred eeEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEecCcCCCCeeee
Q 048542 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN-GCDVCILHFDIKPHNILLD 201 (373)
Q Consensus 123 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~-~~~~~ivH~dikp~Nil~~ 201 (373)
.+.++. ...+++|||++++.+....... .... .....++.+++.++.++|. . +++|+||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~----~~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKD----VRLL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhh----hhhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence 444433 2358999999885543211100 0011 5677899999999999998 7 999999999999999
Q ss_pred CCCceEEeeccCcccC
Q 048542 202 HNFIPKVSDFGLAKFH 217 (373)
Q Consensus 202 ~~~~~kl~Dfg~~~~~ 217 (373)
++.++|+|||.+...
T Consensus 150 -~~~~~liDfg~a~~~ 164 (187)
T cd05119 150 -DGKVYIIDVPQAVEI 164 (187)
T ss_pred -CCcEEEEECcccccc
Confidence 899999999998644
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.70 E-value=2.5e-16 Score=127.99 Aligned_cols=134 Identities=21% Similarity=0.207 Sum_probs=112.9
Q ss_pred hcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCC--CceeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 70 THKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHH--VNVVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h--~ni~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
.+.||.|.++.||++...+ ..+++|....... ...+.+|...++.++| .++++++.+....+..+++|||++++++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 4679999999999999764 7899999876544 5678899999999976 5889999888877889999999988776
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
..+ +......++.+++++++++|.....+++|+|++|+||+++..+.++++|||.+..
T Consensus 81 ~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 81 DEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 433 4456677899999999999986444799999999999999989999999998864
No 433
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.69 E-value=3.7e-18 Score=166.92 Aligned_cols=255 Identities=22% Similarity=0.271 Sum_probs=189.5
Q ss_pred HhhhhcccCCCCcEEEEEEEEcC--CceeEEEEeccCc---cCHHHHHHHHHHhcccC-CCceeeEeeEeeeCCeeEEEE
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQT--GGLIAVKMLENSK---FSAEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~~--~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~ 139 (373)
.|++.+.||+|+|+.|-...... ...+|.|.+.... ...+....|..+-+.+. |+|++.+++.....+..++.+
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 45677889999999998887543 3455666554432 22244555777777776 999999999999999999999
Q ss_pred eccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCCCeEecCcCCCCeeeeCCC-ceEEeeccCcccC
Q 048542 140 EYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLH-NGCDVCILHFDIKPHNILLDHNF-IPKVSDFGLAKFH 217 (373)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH-~~~~~~ivH~dikp~Nil~~~~~-~~kl~Dfg~~~~~ 217 (373)
++..++++.+.+.... ....+...+...+.|+..++.|+| .. ++.|+|+||+|.+++..+ ..+++|||+|...
T Consensus 101 ~~s~g~~~f~~i~~~~--~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPD--STGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred CcccccccccccccCC--ccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 9999999988773111 114555566778999999999999 77 999999999999999999 9999999999977
Q ss_pred CC-CCCceeeecccC-CCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCC
Q 048542 218 PK-ENDFVSISATRG-TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGG 295 (373)
Q Consensus 218 ~~-~~~~~~~~~~~g-t~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (373)
.. .+........+| ++.|.|||...+. .......|+||.|+++..+++|..||......... ...|.... +.
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~-~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~--~~~~~~~~---~~ 249 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGK-AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR--YSSWKSNK---GR 249 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccch-hhcCCCcccccccccccccccCCCCcccccccccc--ceeecccc---cc
Confidence 66 444445556678 9999999998774 35567789999999999999999999876644321 11111110 00
Q ss_pred CcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 296 DLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.. .......+....+++.+++..+|..|.+.+++..
T Consensus 250 ~~-----~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 250 FT-----QLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cc-----cCccccCChhhhhcccccccCCchhccccccccc
Confidence 00 1111233456788888999999999999988754
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.66 E-value=7e-16 Score=135.01 Aligned_cols=133 Identities=17% Similarity=0.190 Sum_probs=101.9
Q ss_pred cccC-CCCcEEEEEEEEcCCceeEEEEeccCc--------------cCHHHHHHHHHHhcccCCCce--eeEeeEeeeC-
Q 048542 71 HKLG-QGGFGSVYKGQLQTGGLIAVKMLENSK--------------FSAEEFINEVSTIGRIHHVNV--VQLLGFCSEG- 132 (373)
Q Consensus 71 ~~ig-~G~~g~V~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~e~~~l~~l~h~ni--~~~~~~~~~~- 132 (373)
..|| .|+.|+||.+... +..+++|.+.... .....+.+|+.++..++|+++ +..+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4577 8889999998875 7789999875321 122467889999999988774 6666664332
Q ss_pred C---eeEEEEeccCc-CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEE
Q 048542 133 S---KRALVYEYMPN-GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKV 208 (373)
Q Consensus 133 ~---~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl 208 (373)
. ..++|||++++ .+|.+++.. ..++.. .+.+++.++.+||+. ||+|+||||.|||++.++.++|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQE-----APLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhc-----CCCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence 2 23599999987 688777621 234443 356889999999998 9999999999999998889999
Q ss_pred eeccCccc
Q 048542 209 SDFGLAKF 216 (373)
Q Consensus 209 ~Dfg~~~~ 216 (373)
+|||.+..
T Consensus 184 IDfg~~~~ 191 (239)
T PRK01723 184 IDFDRGEL 191 (239)
T ss_pred EECCCccc
Confidence 99998864
No 435
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.53 E-value=5.8e-14 Score=133.35 Aligned_cols=139 Identities=20% Similarity=0.206 Sum_probs=96.1
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccCH-----------------------------------------HHHHH
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSA-----------------------------------------EEFIN 109 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------------~~~~~ 109 (373)
+.||+|++|.||+|++++|+.||||+.+...... -++.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 5699999999999999999999999986532100 02344
Q ss_pred HHHHhcccC----CCceeeEeeEe-eeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHH-HHHHHHcC
Q 048542 110 EVSTIGRIH----HVNVVQLLGFC-SEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR-GIEYLHNG 183 (373)
Q Consensus 110 e~~~l~~l~----h~ni~~~~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~-al~~LH~~ 183 (373)
|...+.++. +.+-+.+-.++ ......++||||++|++|.+...... .... ...++..++. .+..+|..
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~---~~~~---~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE---AGLD---RKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh---cCCC---HHHHHHHHHHHHHHHHHhC
Confidence 555555542 22222222222 22345789999999999987653211 1112 2345555555 46788887
Q ss_pred CCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 184 ~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
|++|+|++|.||+++.++.++++|||++....
T Consensus 277 ---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 ---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999987654
No 436
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.49 E-value=2.2e-14 Score=125.00 Aligned_cols=204 Identities=22% Similarity=0.266 Sum_probs=137.6
Q ss_pred HhcccCCCceeeEeeEeeeC-----CeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC
Q 048542 113 TIGRIHHVNVVQLLGFCSEG-----SKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVC 187 (373)
Q Consensus 113 ~l~~l~h~ni~~~~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ 187 (373)
-+..+-|.||++++.++.+. ....++.|||..|++..++.........+....-.+|+.||..||.|||+. ++.
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCc
Confidence 34445699999999988653 346789999999999999977777777888888889999999999999985 789
Q ss_pred eEecCcCCCCeeeeCCCceEEeeccCcccCCC--CCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHH
Q 048542 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK--ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA 265 (373)
Q Consensus 188 ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll 265 (373)
++|+++..+.|++..+|-+|+.--.-...... ...........+.++|.+||.= ...+.+.++|||+||+...+|-
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg--~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESG--TTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcC--cccccccchhhhhhhHHHHHHH
Confidence 99999999999999998888763211111000 0000011223467889999953 3346667899999999999998
Q ss_pred cCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 266 GGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 266 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.+.--.... ......... ..+ ....+.+ ..-+.++..|++..|..||++.+++.
T Consensus 277 ilEiq~tns----eS~~~~ee~---ia~-~i~~len---------~lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 277 ILEIQSTNS----ESKVEVEEN---IAN-VIIGLEN---------GLQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred HheeccCCC----cceeehhhh---hhh-heeeccC---------ccccCcCcccccCCCCCCcchhhhhc
Confidence 765321111 111111110 000 0011111 11245667799999999999998864
No 437
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.47 E-value=2.7e-13 Score=112.66 Aligned_cols=130 Identities=20% Similarity=0.157 Sum_probs=96.1
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCce-eeEeeEeeeCCeeEEEEeccCcCCccc
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNV-VQLLGFCSEGSKRALVYEYMPNGSLDR 149 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~lv~e~~~~gsL~~ 149 (373)
+.++.|.++.||++... ++.+++|+..........+..|+..++.+.+.++ ++++.+. ....++||||+++.++..
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLT 80 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccc
Confidence 56889999999999876 7889999876554333456789999998865444 4455443 334589999999988754
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCC--CCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 150 HVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC--DVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 150 ~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~--~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
.. . ....+..+++++++.||+.. ..+++|+|++|.||+++ ++.++++||+.+..
T Consensus 81 ~~---------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 81 ED---------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cc---------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 21 0 11235678999999999872 12359999999999999 66899999998763
No 438
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=9.2e-14 Score=130.61 Aligned_cols=252 Identities=21% Similarity=0.200 Sum_probs=182.3
Q ss_pred HHHHHHhhhhcccCC--CCcEEEEEEEE--c-CCceeEEEEeccCc---cCHHHHHHHHHHhccc-CCCceeeEeeEeee
Q 048542 61 QIIAMTNHFTHKLGQ--GGFGSVYKGQL--Q-TGGLIAVKMLENSK---FSAEEFINEVSTIGRI-HHVNVVQLLGFCSE 131 (373)
Q Consensus 61 ~i~~~~~~~~~~ig~--G~~g~V~~~~~--~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~ 131 (373)
+....+..+.+.+|. |.+|.+|.+.. . ++..+|+|.-+... ....+-.+|+...+++ .|+|.++.+..+..
T Consensus 110 s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 110 SFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred chhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc
Confidence 344445566788999 99999999975 3 67889998744322 1223335677777777 48999999999999
Q ss_pred CCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHcCCCCCeEecCcCCCCeeeeCC-Cce
Q 048542 132 GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTAR----GIEYLHNGCDVCILHFDIKPHNILLDHN-FIP 206 (373)
Q Consensus 132 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~----al~~LH~~~~~~ivH~dikp~Nil~~~~-~~~ 206 (373)
.+..++-+|+| +.+|..+.. .....++...++....+... |+.++|+. +++|-|+||.||+...+ ...
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~---~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~ 262 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCH---TPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSC 262 (524)
T ss_pred CCcceeeeccc-cchhHHhhh---cccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheeccccccee
Confidence 99999999999 467776663 33455777888888888888 99999998 99999999999999988 889
Q ss_pred EEeeccCcccCCCCCCc---eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccc
Q 048542 207 KVSDFGLAKFHPKENDF---VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYF 283 (373)
Q Consensus 207 kl~Dfg~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~ 283 (373)
+++|||+...+....-. .......|...|++||...+ .++...|+|++|.++.+-..+..+....-..
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~---l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~------ 333 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG---LATFASDIFSLGEVILEAILGSHLPSVGKNS------ 333 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc---ccchHhhhcchhhhhHhhHhhcccccCCCCC------
Confidence 99999999877654411 11122357788999999865 5677899999999999999887665433111
Q ss_pred hHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 048542 284 PSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLE 336 (373)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 336 (373)
.| ...+.+... .++-...+.++...+.+|++.+|..|++.+.+..
T Consensus 334 -~W--~~~r~~~ip-----~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 334 -SW--SQLRQGYIP-----LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -Cc--cccccccCc-----hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11 111111110 1111222445666889999999999999887653
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.41 E-value=1.5e-13 Score=132.09 Aligned_cols=138 Identities=17% Similarity=0.221 Sum_probs=89.7
Q ss_pred cccCCCCcEEEEEEEEcC-CceeEEEEeccCccC---------------------------H--------H------HHH
Q 048542 71 HKLGQGGFGSVYKGQLQT-GGLIAVKMLENSKFS---------------------------A--------E------EFI 108 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~-~~~vaiK~~~~~~~~---------------------------~--------~------~~~ 108 (373)
+.||+|++|.||+|++++ |+.||||++++.-.. . + ++.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 579999999999999886 999999999754210 0 1 133
Q ss_pred HHHHHhcccC----CCceeeEeeEeee-CCeeEEEEeccCcCCccccccCCCCCC---CCCCHHHHHHHHHHHHHHHHHH
Q 048542 109 NEVSTIGRIH----HVNVVQLLGFCSE-GSKRALVYEYMPNGSLDRHVFPKESRG---QSLCWEKLHEVALGTARGIEYL 180 (373)
Q Consensus 109 ~e~~~l~~l~----h~ni~~~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~---~~l~~~~~~~i~~~i~~al~~L 180 (373)
+|...+.++. +.+.+.+-.++.+ ....++||||+.|+++.+..... ..+ ..+....+..++.|+.
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~-~~g~d~~~la~~~v~~~~~Qif------ 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALR-AAGTDMKLLAERGVEVFFTQVF------ 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHH-hcCCCHHHHHHHHHHHHHHHHH------
Confidence 3444444442 3333333333322 34568999999999997642111 111 1233333334444443
Q ss_pred HcCCCCCeEecCcCCCCeeeeCCC----ceEEeeccCcccCCC
Q 048542 181 HNGCDVCILHFDIKPHNILLDHNF----IPKVSDFGLAKFHPK 219 (373)
Q Consensus 181 H~~~~~~ivH~dikp~Nil~~~~~----~~kl~Dfg~~~~~~~ 219 (373)
.. |++|+|++|.||+++.++ .++++|||++.....
T Consensus 278 -~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 -RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 34 999999999999999887 999999999876644
No 440
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.39 E-value=8.8e-12 Score=104.56 Aligned_cols=136 Identities=13% Similarity=0.146 Sum_probs=98.0
Q ss_pred cccCCCCcEEEEEEEEcC-------CceeEEEEeccCc----------------------cCH-HHH----HHHHHHhcc
Q 048542 71 HKLGQGGFGSVYKGQLQT-------GGLIAVKMLENSK----------------------FSA-EEF----INEVSTIGR 116 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~-------~~~vaiK~~~~~~----------------------~~~-~~~----~~e~~~l~~ 116 (373)
..||.|--+.||.|...+ +..+|||+.+.+. .+. ..+ .+|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997543 4789999875311 011 122 379999998
Q ss_pred cCC--CceeeEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HcCCCCCeEecCc
Q 048542 117 IHH--VNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYL-HNGCDVCILHFDI 193 (373)
Q Consensus 117 l~h--~ni~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~L-H~~~~~~ivH~di 193 (373)
+.. -+++.++++ ...++||||+.+..+.... -+...++......+..+++.+|..+ |.. +++|+|+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~----Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPK----LKDAKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchh----hhccccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 853 456666654 4568999999764332111 1122345556677889999999999 887 9999999
Q ss_pred CCCCeeeeCCCceEEeeccCcccCC
Q 048542 194 KPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 194 kp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
++.||+++ ++.++|+|||.+....
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999997 4689999999887543
No 441
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.38 E-value=9.9e-12 Score=118.31 Aligned_cols=165 Identities=18% Similarity=0.219 Sum_probs=123.4
Q ss_pred EcCCceeEEEEeccCccC-HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHH
Q 048542 86 LQTGGLIAVKMLENSKFS-AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWE 164 (373)
Q Consensus 86 ~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~ 164 (373)
..++.+|.|...+.+... .+...+-++.++.++||||+++++.++.....|+|+|.+. .|..++ ..+...
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~l-------k~l~~~ 104 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVL-------KELGKE 104 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHH-------HHhHHH
Confidence 446788888877765442 3556788899999999999999999999999999999873 344444 123356
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccc
Q 048542 165 KLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 244 (373)
Q Consensus 165 ~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 244 (373)
.+..-+.||+.||.+||+. .+++|++|..+.|+++..|..||++|.++........ ......--..|..|+.+...
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s 180 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPS 180 (690)
T ss_pred HHHHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCcc
Confidence 6677889999999999964 3999999999999999999999999998864432221 00111122346677765432
Q ss_pred cCCcCcccchHHHHHHHHHHHcC
Q 048542 245 FGTVSCKSDVYGFGMVLLEMAGG 267 (373)
Q Consensus 245 ~~~~s~~~DvwslG~~l~~ll~g 267 (373)
....|.|.|||++++++.|
T Consensus 181 ----~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 181 ----EWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ----ccchhhhhHHHHHHHHhCc
Confidence 1346999999999999999
No 442
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.32 E-value=3.3e-11 Score=104.59 Aligned_cols=141 Identities=21% Similarity=0.239 Sum_probs=109.8
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCcc--CHHHHHHHHHHhcccCC--CceeeEeeEeeeCC---eeEEEEeccC
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKF--SAEEFINEVSTIGRIHH--VNVVQLLGFCSEGS---KRALVYEYMP 143 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h--~ni~~~~~~~~~~~---~~~lv~e~~~ 143 (373)
+.|+.|..+.+|++...+|..+++|....... ...++..|..+++.+++ .++++++.+..... ..+++|||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 46899999999999887668999999776443 34677899999999975 34677777766532 5689999999
Q ss_pred cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCC---------------------------------------
Q 048542 144 NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC--------------------------------------- 184 (373)
Q Consensus 144 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~--------------------------------------- 184 (373)
|.++.+.+.. ..++......++.++++++..||+..
T Consensus 84 G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 84 GRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 9888765521 34667777788888899998888531
Q ss_pred --------------CCCeEecCcCCCCeeeeC--CCceEEeeccCccc
Q 048542 185 --------------DVCILHFDIKPHNILLDH--NFIPKVSDFGLAKF 216 (373)
Q Consensus 185 --------------~~~ivH~dikp~Nil~~~--~~~~kl~Dfg~~~~ 216 (373)
...++|+|++|.||+++. ++.+.++||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 135799999999999998 66789999998763
No 443
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.30 E-value=7e-11 Score=109.38 Aligned_cols=219 Identities=20% Similarity=0.251 Sum_probs=157.8
Q ss_pred CcEEEEEEEEc-CCceeEEEEeccCcc-CHHHHHHHHHHhcccCCCceeeEeeEee----eCCeeEEEEeccCc-CCccc
Q 048542 77 GFGSVYKGQLQ-TGGLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLGFCS----EGSKRALVYEYMPN-GSLDR 149 (373)
Q Consensus 77 ~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~----~~~~~~lv~e~~~~-gsL~~ 149 (373)
-..+.|++..+ +|..|++|++...+. .......-++.++++.|+|+|++.+++. .+..+++|++|+++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 34578999855 899999999943221 1223345678899999999999998875 35568899999875 56666
Q ss_pred cccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 150 HVFPKE-----------SRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 150 ~l~~~~-----------~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
+.+... ..+...++..+|.++.|+..||.++|+. |+..+-+.|.+|+++++.+++|+..|......
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeec
Confidence 554321 2356688999999999999999999998 99999999999999999999999888776554
Q ss_pred CCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcc
Q 048542 219 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLE 298 (373)
Q Consensus 219 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (373)
.+. + |-+.+ .++-|.=.||.++..|-+|...-...+... .
T Consensus 445 ~d~---------~-------~~le~-----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~------~------------- 484 (655)
T KOG3741|consen 445 EDP---------T-------EPLES-----QQQNDLRDLGLLLLALATGTENSNRTDSTQ------S------------- 484 (655)
T ss_pred CCC---------C-------cchhH-----HhhhhHHHHHHHHHHHhhcccccccccchH------H-------------
Confidence 332 0 11111 235699999999999999964311111100 0
Q ss_pred cCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 048542 299 LQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLEG 340 (373)
Q Consensus 299 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~~ 340 (373)
.....+...++.++++++......++++ -+..+++.++-+
T Consensus 485 -s~~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~~~ 524 (655)
T KOG3741|consen 485 -SHLTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMIGS 524 (655)
T ss_pred -HHHHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHHHH
Confidence 0012344677888899999999888887 677877776543
No 444
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.23 E-value=1e-10 Score=95.06 Aligned_cols=130 Identities=21% Similarity=0.248 Sum_probs=96.5
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEE-eccCccC--------HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKM-LENSKFS--------AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~-~~~~~~~--------~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
..+++|+-+.++.+.+. |.++++|. +++.-.. .++-.+|..++.++.--.|....=+..+.....++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999775 44566664 3322111 24567899999988655554444455667778899999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
.+|..|.+.+... ...++..+-.-+.-||.. +|+|+|++++||.++.++ +.++|||++..
T Consensus 81 I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9998888787322 145667777778889998 999999999999997654 99999999874
No 445
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.18 E-value=2.3e-10 Score=95.63 Aligned_cols=124 Identities=27% Similarity=0.280 Sum_probs=80.5
Q ss_pred EEEEEEEcCCceeEEEEeccCccC---------------------------HHHHHHHHHHhcccCCC--ceeeEeeEee
Q 048542 80 SVYKGQLQTGGLIAVKMLENSKFS---------------------------AEEFINEVSTIGRIHHV--NVVQLLGFCS 130 (373)
Q Consensus 80 ~V~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~e~~~l~~l~h~--ni~~~~~~~~ 130 (373)
.||.|...+|..+|+|+.+....+ .....+|.+.|.++... ++++++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 489999888999999997532110 13456899999999755 566776542
Q ss_pred eCCeeEEEEeccC--cCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHcCCCCCeEecCcCCCCeeeeCCCceE
Q 048542 131 EGSKRALVYEYMP--NGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEY-LHNGCDVCILHFDIKPHNILLDHNFIPK 207 (373)
Q Consensus 131 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~-LH~~~~~~ivH~dikp~Nil~~~~~~~k 207 (373)
..++||||++ |..+..+.. ..++......++.+++..+.. +|.. |++|+|+++.||+++++ .+.
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~------~~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKD------VDLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHH------CGGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred ---CCEEEEEecCCCccchhhHHh------ccccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 3479999998 545543321 111123345567777775555 5777 99999999999999887 999
Q ss_pred EeeccCcccC
Q 048542 208 VSDFGLAKFH 217 (373)
Q Consensus 208 l~Dfg~~~~~ 217 (373)
++|||.+...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999988644
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.17 E-value=1.7e-10 Score=93.38 Aligned_cols=141 Identities=20% Similarity=0.248 Sum_probs=101.8
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEecc-----C----ccCHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEec
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLEN-----S----KFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~-----~----~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
..+-+|+-+.|+++.+. |+...||.=.. . ..+..+..+|.+.+.++.--.|.-..-++.+.....++|||
T Consensus 13 ~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~ 91 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEF 91 (229)
T ss_pred eeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEe
Confidence 56778999999999887 77777775321 1 11235678899999988655555444456677778899999
Q ss_pred cCc-CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCC---ceEEeeccCcccC
Q 048542 142 MPN-GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF---IPKVSDFGLAKFH 217 (373)
Q Consensus 142 ~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~---~~kl~Dfg~~~~~ 217 (373)
+++ .++.+++...- ...........++.+|-+.+.-||.+ +++|+||..+||++..++ .+.++|||++...
T Consensus 92 ~~g~~~vk~~i~~~~--~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 92 IDGASTVKDFILSTM--EDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred ccchhHHHHHHHHHc--cCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 976 36666664321 12222333367888999999999998 999999999999997544 3589999998643
No 447
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.10 E-value=7e-10 Score=100.49 Aligned_cols=266 Identities=13% Similarity=0.122 Sum_probs=158.1
Q ss_pred hhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhccc-CCCceeeEeeE------eee-CCeeEEEEe
Q 048542 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLGF------CSE-GSKRALVYE 140 (373)
Q Consensus 69 ~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~------~~~-~~~~~lv~e 140 (373)
..+.||+|+-+.+|..-.- +.. +-|+.....-... ......|... .||-+-.-+.+ ..+ ....-++|+
T Consensus 15 ~gr~LgqGgea~ly~l~e~-~d~-VAKIYh~Pppa~~--aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV-RDQ-VAKIYHAPPPAAQ--AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred CCccccCCccceeeecchh-hch-hheeecCCCchHH--HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 4578999999999965322 222 3355544322111 1122223222 45432220110 111 222557788
Q ss_pred ccCcCCccccccC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 141 YMPNGSLDRHVFP---KESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 141 ~~~~gsL~~~l~~---~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
.+.+..--..+.+ ++.+.....|......+..++.+.+.||+. |.+-+|++++|+|+++++.+.|.|=..-...
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~ 167 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN 167 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceeec
Confidence 7765422222222 233445578999999999999999999998 9999999999999999999999985443332
Q ss_pred CCCCCceeeecccCCCCcccccccc-cc--cCCcCcccchHHHHHHHHHHHcC-CCCCCCCcCc-----cccccchHHHH
Q 048542 218 PKENDFVSISATRGTIGYIAPELIS-RN--FGTVSCKSDVYGFGMVLLEMAGG-RRNSNMNATR-----SSKAYFPSWVY 288 (373)
Q Consensus 218 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~--~~~~s~~~DvwslG~~l~~ll~g-~~p~~~~~~~-----~~~~~~~~~~~ 288 (373)
... .......|...|.+||.-. +. .-..+...|.|.+|+++++|+.| ++||..-... ..+..+....+
T Consensus 168 ~ng---~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f 244 (637)
T COG4248 168 ANG---TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRF 244 (637)
T ss_pred cCC---ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhccee
Confidence 222 2334567899999999643 11 01345678999999999999987 8998753321 11111111111
Q ss_pred HHHhcCCCcccCccchh-hHHHHHHHHHHHHhhcCCC--CCCCCCHHHHHHHHhcCCCC
Q 048542 289 DQLNKGGDLELQNVTEI-ESMIARKLCMIGLWCIQVK--AADRPSMTKVLEMLEGSIDD 344 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~d--p~~Rps~~ell~~L~~~~~~ 344 (373)
....+......+..... ...++.++..|..+|+... +.-|||++.++..|..+-++
T Consensus 245 ~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~ 303 (637)
T COG4248 245 AYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ 303 (637)
T ss_pred eechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence 11111111111111111 1345667888999998653 67899999998887754443
No 448
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.10 E-value=1.8e-11 Score=115.27 Aligned_cols=241 Identities=20% Similarity=0.228 Sum_probs=165.4
Q ss_pred hhhcccCCCCcEEEEEEEEc--CCceeEEEEeccCccCH-HH--HHHHHHHhccc-CCCceeeEeeEeeeCCeeEEEEec
Q 048542 68 HFTHKLGQGGFGSVYKGQLQ--TGGLIAVKMLENSKFSA-EE--FINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEY 141 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~~--~~~~vaiK~~~~~~~~~-~~--~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~ 141 (373)
.+...||.|.|+.|+....+ ++..|++|.....-... .+ -..|+-+...+ .|.+++..+..+...+..|+--||
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~ 347 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEF 347 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhh
Confidence 44578999999999998744 67789999876644332 12 23455555555 488888887777777788899999
Q ss_pred cCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC-CceEEeeccCcccCCCC
Q 048542 142 MPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKE 220 (373)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~-~~~kl~Dfg~~~~~~~~ 220 (373)
|.++++.... .....+.+...+.+..|++.++.++|+. .++|+|++|+||++..+ +..++.|||+...+.-.
T Consensus 348 ~~~~s~~l~~----~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~ 420 (524)
T KOG0601|consen 348 CEGGSSSLRS----VTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS 420 (524)
T ss_pred hcCcchhhhh----HHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccccccccee
Confidence 9998886655 2234466777889999999999999998 99999999999999875 78899999988642111
Q ss_pred CCceeeecccCCCCccc-ccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCccc
Q 048542 221 NDFVSISATRGTIGYIA-PELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLEL 299 (373)
Q Consensus 221 ~~~~~~~~~~gt~~y~a-PE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
. ....+..++.| +|++... ..+..+.|++|||.-+.+..++..--+.... +..+..+..+..
T Consensus 421 ~-----~~~~~~~r~~p~~~~~~e~-~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~-----------~~~i~~~~~p~~ 483 (524)
T KOG0601|consen 421 S-----GVFHHIDRLYPIAEILLED-YPHLSKADIFSLGLSVDEAITGSPLSESGVQ-----------SLTIRSGDTPNL 483 (524)
T ss_pred c-----ccccccccccccchhhccc-cccccccccccccccccccccCcccCccccc-----------ceeeecccccCC
Confidence 1 11223344452 5555443 4667789999999999999988643221110 001111111111
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 048542 300 QNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 339 (373)
Q Consensus 300 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L~ 339 (373)
......+..+...+...++..||++.++....+
T Consensus 484 -------~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 484 -------PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred -------CchHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 112245677778899999999999988766543
No 449
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.09 E-value=1.2e-09 Score=94.04 Aligned_cols=136 Identities=23% Similarity=0.195 Sum_probs=98.2
Q ss_pred hhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccC-----------------------HHHHHHHHHHhcccCCC--c
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS-----------------------AEEFINEVSTIGRIHHV--N 121 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-----------------------~~~~~~e~~~l~~l~h~--n 121 (373)
+.+...||-|--+.||.|..+.|.++|||.-+....+ .....+|.+.|..|... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 3566889999999999999999999999975432211 12356899999999654 6
Q ss_pred eeeEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeee
Q 048542 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD 201 (373)
Q Consensus 122 i~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~ 201 (373)
+++.+++ +..++|||+++|-.|...- +..+....++..|++-+..+-.. |++|+|+++-||+++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~ 236 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVT 236 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEe
Confidence 6666654 5668999999886664332 11222333444444444444455 999999999999999
Q ss_pred CCCceEEeeccCcccCC
Q 048542 202 HNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 202 ~~~~~kl~Dfg~~~~~~ 218 (373)
++|.++++||-.+....
T Consensus 237 ~dg~~~vIDwPQ~v~~~ 253 (304)
T COG0478 237 EDGDIVVIDWPQAVPIS 253 (304)
T ss_pred cCCCEEEEeCcccccCC
Confidence 99999999998776443
No 450
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.05 E-value=1e-10 Score=116.30 Aligned_cols=242 Identities=18% Similarity=0.166 Sum_probs=158.8
Q ss_pred hcccCCCCcEEEEEEEEc-CCceeEEEEeccCcc----CHHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCc
Q 048542 70 THKLGQGGFGSVYKGQLQ-TGGLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
.+-+-+|+++.++.+.-. +|...++|....... ..+....+-.++-...+|.++....-+......+++++|..+
T Consensus 809 ~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~ 888 (1205)
T KOG0606|consen 809 TKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNG 888 (1205)
T ss_pred cccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhcc
Confidence 356778888888877533 343444444332111 111222222222223456555554444556778999999999
Q ss_pred CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCC----
Q 048542 145 GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE---- 220 (373)
Q Consensus 145 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 220 (373)
++|...+++. ...+.+.....+..+..+.++||+. .+.|+|++|.|.+...++..+++|||.....+..
T Consensus 889 ~~~~Skl~~~----~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~ 961 (1205)
T KOG0606|consen 889 GDLPSKLHNS----GCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTT 961 (1205)
T ss_pred CCchhhhhcC----CCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccccccCcC
Confidence 9998877432 2455555666777788899999986 6899999999999999999999999843221100
Q ss_pred -----------------C---Cc-----eeeecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCCCCc
Q 048542 221 -----------------N---DF-----VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNA 275 (373)
Q Consensus 221 -----------------~---~~-----~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~~~~ 275 (373)
. .. ..-....||+.|.+||...+. .....+|+|+.|+.+++.++|..||....
T Consensus 962 ~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~--~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 962 DLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGR--RHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred CcccccccCccccccccccccccccchhhccccccCCCcccCCcccccc--cCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 0 00 001233589999999999875 55667899999999999999999997665
Q ss_pred CccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHH
Q 048542 276 TRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMT 332 (373)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 332 (373)
... +++.+-++... .+ ..+...+....+++...+..+|.+|..+.
T Consensus 1040 pq~--------~f~ni~~~~~~-~p---~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1040 PQQ--------IFENILNRDIP-WP---EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhh--------hhhccccCCCC-CC---CCccccChhhhhhhhhhhccCchhccCcc
Confidence 432 22222222211 11 22234466788899999999999998876
No 451
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.97 E-value=6.8e-09 Score=92.02 Aligned_cols=132 Identities=17% Similarity=0.096 Sum_probs=93.1
Q ss_pred EEEEEEEEcCCceeEEEEeccCcc------------CHHHHHHHHHHhcccCCCc--eeeEeeEeee-----CCeeEEEE
Q 048542 79 GSVYKGQLQTGGLIAVKMLENSKF------------SAEEFINEVSTIGRIHHVN--VVQLLGFCSE-----GSKRALVY 139 (373)
Q Consensus 79 g~V~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~e~~~l~~l~h~n--i~~~~~~~~~-----~~~~~lv~ 139 (373)
..|.+.... |+.|.||....... ....+.+|+..+..+...+ .+.++.+... ....++|+
T Consensus 36 rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 36 RRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred ceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 346666554 77899997643221 1124678999888885333 2334444432 23578999
Q ss_pred eccCcC-CccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC-------CCceEEeec
Q 048542 140 EYMPNG-SLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH-------NFIPKVSDF 211 (373)
Q Consensus 140 e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~-------~~~~kl~Df 211 (373)
|++++. +|.+++.... ..+........++.+++..+.-||.. |++|+|++++|||++. +..+.|+||
T Consensus 115 e~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl 189 (268)
T PRK15123 115 EDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVIDL 189 (268)
T ss_pred eeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceEEEEEC
Confidence 999875 7877763221 23345667778999999999999998 9999999999999975 467899999
Q ss_pred cCccc
Q 048542 212 GLAKF 216 (373)
Q Consensus 212 g~~~~ 216 (373)
+.+..
T Consensus 190 ~r~~~ 194 (268)
T PRK15123 190 HRAQI 194 (268)
T ss_pred Ccccc
Confidence 98753
No 452
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.85 E-value=6e-10 Score=106.76 Aligned_cols=151 Identities=19% Similarity=0.245 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceee-------ecccCCCCccccccccc
Q 048542 171 LGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI-------SATRGTIGYIAPELISR 243 (373)
Q Consensus 171 ~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~-------~~~~gt~~y~aPE~~~~ 243 (373)
.+++.|+.|+|.. .++||++|.|++|.++.++..||+.|+.+........+... ........|.|||.+.+
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3455999999976 59999999999999999999999999988755442222111 11224567999999877
Q ss_pred ccCCcCcccchHHHHHHHHHHHcCCCC-CCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcC
Q 048542 244 NFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQ 322 (373)
Q Consensus 244 ~~~~~s~~~DvwslG~~l~~ll~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 322 (373)
. ..+.++|+||+|+++|.+..|..+ +........... ......... ..+...++.++++=+.+++.
T Consensus 184 ~--~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~-------~~~~~~~~~----~~~s~~~p~el~~~l~k~l~ 250 (700)
T KOG2137|consen 184 T--TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSF-------SRNLLNAGA----FGYSNNLPSELRESLKKLLN 250 (700)
T ss_pred c--cccccccceeeeeEEEEEecCCcchhhccCCcchhhh-------hhccccccc----ccccccCcHHHHHHHHHHhc
Confidence 4 667899999999999999955443 332221110000 000000000 11224456677788888999
Q ss_pred CCCCCCCCHHHHHH
Q 048542 323 VKAADRPSMTKVLE 336 (373)
Q Consensus 323 ~dp~~Rps~~ell~ 336 (373)
.++.-||++.++..
T Consensus 251 ~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 251 GDSAVRPTLDLLLS 264 (700)
T ss_pred CCcccCcchhhhhc
Confidence 99999998877754
No 453
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.76 E-value=3.8e-08 Score=94.48 Aligned_cols=140 Identities=18% Similarity=0.230 Sum_probs=90.4
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccC---------------------------H----H----------HHHH
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS---------------------------A----E----------EFIN 109 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~---------------------------~----~----------~~~~ 109 (373)
.-|+.++-|.||+|++++|+.||||+.+++-.. . + ++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 568899999999999999999999998643211 0 1 1334
Q ss_pred HHHHhcccC-----CCceeeEeeEee-eCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Q 048542 110 EVSTIGRIH-----HVNVVQLLGFCS-EGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183 (373)
Q Consensus 110 e~~~l~~l~-----h~ni~~~~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~ 183 (373)
|...+.++. .+++ .+-.++. -.....++|||++|..+.+...... ...+.+.+.....++. +..+-..
T Consensus 211 EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~---~g~d~k~ia~~~~~~f--~~q~~~d 284 (517)
T COG0661 211 EAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS---AGIDRKELAELLVRAF--LRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHh---cCCCHHHHHHHHHHHH--HHHHHhc
Confidence 555554442 2332 2222232 2456789999999999888753222 2233333322222222 1122222
Q ss_pred CCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCC
Q 048542 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 184 ~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 219 (373)
|+.|.|..|.||+++.+|++.+.|||+......
T Consensus 285 ---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 285 ---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 899999999999999999999999999876543
No 454
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.68 E-value=4e-07 Score=77.95 Aligned_cols=137 Identities=20% Similarity=0.223 Sum_probs=93.3
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccC--------------------HHH-----HHHHHHHhcccC--CCcee
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFS--------------------AEE-----FINEVSTIGRIH--HVNVV 123 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~--------------------~~~-----~~~e~~~l~~l~--h~ni~ 123 (373)
-.|++|--+.||+|...++..+|+|+++..... ..+ ...|+.-|+++. +-.++
T Consensus 54 g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP 133 (268)
T COG1718 54 GCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP 133 (268)
T ss_pred eeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 357778888899999888999999998643211 111 235777777773 34455
Q ss_pred eEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCC
Q 048542 124 QLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHN 203 (373)
Q Consensus 124 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~ 203 (373)
+.+.+. ...+||||+..... -...-+...+.......+..++++.+.-|-.. .++||+||+.-|||+. +
T Consensus 134 ~Pi~~~----~nVLvMEfIg~~g~----pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~--a~LVHgDLSEyNiL~~-~ 202 (268)
T COG1718 134 EPIAFR----NNVLVMEFIGDDGL----PAPRLKDVPLELEEAEGLYEDVVEYMRRLYKE--AGLVHGDLSEYNILVH-D 202 (268)
T ss_pred Cceeec----CCeEEEEeccCCCC----CCCCcccCCcCchhHHHHHHHHHHHHHHHHHh--cCcccccchhhheEEE-C
Confidence 555543 34699999854311 11112233334445667777888888777762 2999999999999998 8
Q ss_pred CceEEeeccCcccCC
Q 048542 204 FIPKVSDFGLAKFHP 218 (373)
Q Consensus 204 ~~~kl~Dfg~~~~~~ 218 (373)
+.+.++|||.+....
T Consensus 203 ~~p~iID~~QaV~~~ 217 (268)
T COG1718 203 GEPYIIDVSQAVTID 217 (268)
T ss_pred CeEEEEECccccccC
Confidence 899999999887554
No 455
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.64 E-value=6.4e-07 Score=77.76 Aligned_cols=132 Identities=20% Similarity=0.254 Sum_probs=86.6
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCc--eeeEeeEeeeCCeeEEEEeccCcCC-c
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVN--VVQLLGFCSEGSKRALVYEYMPNGS-L 147 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~n--i~~~~~~~~~~~~~~lv~e~~~~gs-L 147 (373)
..||.|..+.||+. .+..+++|.... ........+|.+++..+..-. +++.+++........++||+++|.+ +
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~-~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNP-GFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCC-CCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 46899999999984 255788888765 334566789999999886433 5677888777777889999998863 2
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHc---------------------------------------C-CCCC
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN---------------------------------------G-CDVC 187 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~---------------------------------------~-~~~~ 187 (373)
...+. .+......++.++++.+.-||+ . ....
T Consensus 83 ~~~~~--------~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~ 154 (226)
T TIGR02172 83 SRIIS--------DNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTST 154 (226)
T ss_pred hhhhc--------CCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCc
Confidence 11110 0011111122222222222221 1 1235
Q ss_pred eEecCcCCCCeeeeCCCceEEeeccCcc
Q 048542 188 ILHFDIKPHNILLDHNFIPKVSDFGLAK 215 (373)
Q Consensus 188 ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 215 (373)
++|+|+.|.||++++++ +.++||+.+.
T Consensus 155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 155 CLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred eEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 78999999999999887 9999999775
No 456
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.58 E-value=2.3e-07 Score=79.45 Aligned_cols=105 Identities=23% Similarity=0.258 Sum_probs=79.4
Q ss_pred HHHHHHHHHhcccCCC--ceeeEeeEeeeC----CeeEEEEeccCcC-CccccccCCCCCCCCCCHHHHHHHHHHHHHHH
Q 048542 105 EEFINEVSTIGRIHHV--NVVQLLGFCSEG----SKRALVYEYMPNG-SLDRHVFPKESRGQSLCWEKLHEVALGTARGI 177 (373)
Q Consensus 105 ~~~~~e~~~l~~l~h~--ni~~~~~~~~~~----~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al 177 (373)
....+|...+..+... ..++.+++.... ...++|+|++++. +|.+++.... ..+......++.+++..+
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~----~~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE----QLDPSQRRELLRALARLI 131 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc----ccchhhHHHHHHHHHHHH
Confidence 4677888888877432 344455555442 2457999999874 7887773321 255566788999999999
Q ss_pred HHHHcCCCCCeEecCcCCCCeeeeCCC---ceEEeeccCccc
Q 048542 178 EYLHNGCDVCILHFDIKPHNILLDHNF---IPKVSDFGLAKF 216 (373)
Q Consensus 178 ~~LH~~~~~~ivH~dikp~Nil~~~~~---~~kl~Dfg~~~~ 216 (373)
+-||.. |++|+|+++.|||++.++ .+.++||+-+..
T Consensus 132 ~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 132 AKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999998 999999999999999876 899999997764
No 457
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.56 E-value=3.7e-07 Score=87.53 Aligned_cols=139 Identities=17% Similarity=0.184 Sum_probs=90.2
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccCH--------------------------------------HHHHHHHH
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSA--------------------------------------EEFINEVS 112 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~--------------------------------------~~~~~e~~ 112 (373)
+.||..+.|.||+|+.++|+.||||+.++.-... =+|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 6799999999999999999999999875432110 02334443
Q ss_pred Hhccc----CCCc------eeeEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048542 113 TIGRI----HHVN------VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHN 182 (373)
Q Consensus 113 ~l~~l----~h~n------i~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~ 182 (373)
-..++ .|-+ |+++|..+ .....|+||||+|..+.+.-... ...++...+..-+.+...-+-+.|
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~---~~gi~~~~i~~~l~~~~~~qIf~~- 320 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAID---KRGISPHDILNKLVEAYLEQIFKT- 320 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHH---HcCCCHHHHHHHHHHHHHHHHHhc-
Confidence 33332 3434 44444322 34678999999999887764322 223444444333333322222222
Q ss_pred CCCCCeEecCcCCCCeeee----CCCceEEeeccCcccCCC
Q 048542 183 GCDVCILHFDIKPHNILLD----HNFIPKVSDFGLAKFHPK 219 (373)
Q Consensus 183 ~~~~~ivH~dikp~Nil~~----~~~~~kl~Dfg~~~~~~~ 219 (373)
|++|+|-.|.||+++ .++.+.+-|||+......
T Consensus 321 ----GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 321 ----GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred ----CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 899999999999998 367899999999876543
No 458
>PRK09902 hypothetical protein; Provisional
Probab=98.50 E-value=1.5e-06 Score=73.29 Aligned_cols=135 Identities=16% Similarity=0.126 Sum_probs=97.7
Q ss_pred CCCCcEEEEEEEEcCCceeEEEEeccC-------ccCHHHHHHHHHHhcccCCC--ceeeEeeEeee-----CCeeEEEE
Q 048542 74 GQGGFGSVYKGQLQTGGLIAVKMLENS-------KFSAEEFINEVSTIGRIHHV--NVVQLLGFCSE-----GSKRALVY 139 (373)
Q Consensus 74 g~G~~g~V~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~e~~~l~~l~h~--ni~~~~~~~~~-----~~~~~lv~ 139 (373)
|+||-+.|++-... |..+-+|..... ......|.+|+..+..+..- .+++.. ++.. ...-+||+
T Consensus 27 ~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 57888899987766 446888876521 22446789999999998532 244444 3321 12356899
Q ss_pred eccCc-CCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCc--eEEeeccCcc
Q 048542 140 EYMPN-GSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFI--PKVSDFGLAK 215 (373)
Q Consensus 140 e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~--~kl~Dfg~~~ 215 (373)
|-+++ -+|.+++.... -.+.+......++.+++..++-||+. |+.|+|+.+.||+++.++. ++++||.-++
T Consensus 105 e~L~g~~~L~~~l~~~~--~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 105 EDMAGFISIADWYAQHA--VSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EeCCCCccHHHHHhcCC--cCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 97743 57777763321 22456677788999999999999998 9999999999999986666 9999998665
No 459
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.44 E-value=3.3e-06 Score=71.61 Aligned_cols=133 Identities=16% Similarity=0.120 Sum_probs=81.2
Q ss_pred HhhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHH----------HHHHHHHhcccCC---CceeeEeeEee--
Q 048542 66 TNHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEE----------FINEVSTIGRIHH---VNVVQLLGFCS-- 130 (373)
Q Consensus 66 ~~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~----------~~~e~~~l~~l~h---~ni~~~~~~~~-- 130 (373)
.+...+.+-......|.+-..+ |+.+++|..+......++ ..+.+..+..+.. -....++.+.+
T Consensus 32 ~~~~~kv~k~~~r~~ValIei~-~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk 110 (229)
T PF06176_consen 32 NYKIIKVFKNTKRNYVALIEID-GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKK 110 (229)
T ss_pred CceEEEeecCCCccEEEEEEEC-CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeee
Confidence 4444455555555555555444 788999987654332222 1233333333322 22222222222
Q ss_pred ---eCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceE
Q 048542 131 ---EGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPK 207 (373)
Q Consensus 131 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~k 207 (373)
-....+++|||++|..|.+... +.+ .+...+.+++.-+|+. |++|+|..|.|++++.++ ++
T Consensus 111 ~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~~-i~ 174 (229)
T PF06176_consen 111 IFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNNG-IR 174 (229)
T ss_pred eccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECCc-EE
Confidence 2234568999999988866531 222 2445677889999998 999999999999998654 99
Q ss_pred EeeccCcc
Q 048542 208 VSDFGLAK 215 (373)
Q Consensus 208 l~Dfg~~~ 215 (373)
++||+...
T Consensus 175 iID~~~k~ 182 (229)
T PF06176_consen 175 IIDTQGKR 182 (229)
T ss_pred EEECcccc
Confidence 99998554
No 460
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.41 E-value=3.4e-06 Score=74.32 Aligned_cols=75 Identities=13% Similarity=0.199 Sum_probs=53.5
Q ss_pred cCCCCc-EEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccC-CCceeeEeeEeeeCCeeEEEEeccCcCCcccc
Q 048542 73 LGQGGF-GSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYEYMPNGSLDRH 150 (373)
Q Consensus 73 ig~G~~-g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~~~ 150 (373)
|..|.+ ..||+.... +..+.+|+..... ..+...|+.+++.+. +--+++++++...++..++|||+++|.++...
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 444555 778998765 4788889876543 345677888888884 34466777777666678999999998777543
No 461
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.41 E-value=2.2e-06 Score=74.69 Aligned_cols=77 Identities=23% Similarity=0.315 Sum_probs=56.4
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCC--ceeeEeeEe---eeCCeeEEEEeccCcC
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHV--NVVQLLGFC---SEGSKRALVYEYMPNG 145 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~--ni~~~~~~~---~~~~~~~lv~e~~~~g 145 (373)
+.++.|..+.||+....+ +.+++|..... .....+.+|..+++.+... .++.++... ......+++|+++++.
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~ 80 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR 80 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence 568899999999999886 69999987665 4456778899998888532 355666544 2334578999999888
Q ss_pred Cccc
Q 048542 146 SLDR 149 (373)
Q Consensus 146 sL~~ 149 (373)
.+..
T Consensus 81 ~~~~ 84 (239)
T PF01636_consen 81 PLDD 84 (239)
T ss_dssp EHHH
T ss_pred cccc
Confidence 7766
No 462
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.38 E-value=2.5e-05 Score=65.61 Aligned_cols=105 Identities=24% Similarity=0.204 Sum_probs=82.2
Q ss_pred HHHHHHhcccCC-CceeeEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 048542 108 INEVSTIGRIHH-VNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDV 186 (373)
Q Consensus 108 ~~e~~~l~~l~h-~ni~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~ 186 (373)
.+|.-+++.+++ +++++++|+|-. .++.||...+++...-. .-..-...+|..+.+|+.++++.+.++++....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~-~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYR-PLSQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCcccccccc-ccccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 357888888875 699999999944 67899998776642210 001123478999999999999999999986555
Q ss_pred CeEecCcCCCCeeeeCCCceEEeeccCcccC
Q 048542 187 CILHFDIKPHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 187 ~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
.+.-.|++++|+-+++++++|++|...+...
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 6888999999999999999999999876543
No 463
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.32 E-value=5.5e-06 Score=67.23 Aligned_cols=130 Identities=18% Similarity=0.212 Sum_probs=87.8
Q ss_pred hhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCceee-EeeEeeeCCeeEEEEeccCcCC
Q 048542 68 HFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQ-LLGFCSEGSKRALVYEYMPNGS 146 (373)
Q Consensus 68 ~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~~-~~~~~~~~~~~~lv~e~~~~gs 146 (373)
+..+.|++|++|.||+|.+. |..+|+|+-+. ......+..|.+++..++-.++.+ +|.+-.+ ++.|||+.|-+
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~-ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G~~ 98 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR-GGEVALKVRRR-DSPRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDGRP 98 (201)
T ss_pred hhhhhhhcccccEEEEeecc-CceEEEEEecC-CcchhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcCcc
Confidence 34578999999999999988 66888886554 345577889999999997666544 4433222 35599998878
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcC-CCCeeeeCCCceEEeeccCcccC
Q 048542 147 LDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIK-PHNILLDHNFIPKVSDFGLAKFH 217 (373)
Q Consensus 147 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dik-p~Nil~~~~~~~kl~Dfg~~~~~ 217 (373)
|.+.... ... +-...+++.---|-.. ||-|+.|. |...++-.++.+.|+||..|+..
T Consensus 99 L~~~~~~-------~~r----k~l~~vlE~a~~LD~~---GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 99 LGKLEIG-------GDR----KHLLRVLEKAYKLDRL---GIEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred hhhhhhc-------ccH----HHHHHHHHHHHHHHHh---ccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 7655411 112 2233455553444444 99999986 44444445559999999988743
No 464
>PLN02876 acyl-CoA dehydrogenase
Probab=98.30 E-value=1.4e-05 Score=82.57 Aligned_cols=78 Identities=15% Similarity=0.304 Sum_probs=57.9
Q ss_pred hcccCCCCcEEEEEEEEcCC---ceeEEEEeccCc--cCHHHHHHHHHHhcccC-CCce--eeEeeEeeeC---CeeEEE
Q 048542 70 THKLGQGGFGSVYKGQLQTG---GLIAVKMLENSK--FSAEEFINEVSTIGRIH-HVNV--VQLLGFCSEG---SKRALV 138 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~~~---~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~-h~ni--~~~~~~~~~~---~~~~lv 138 (373)
.+.++.|.+..+|+....++ ..+++|+..... .....+.+|..+++.+. |.++ ++++.+|.+. ...|+|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 36789999999999876643 467888765433 23457889999999995 6654 7788887664 467899
Q ss_pred EeccCcCCc
Q 048542 139 YEYMPNGSL 147 (373)
Q Consensus 139 ~e~~~~gsL 147 (373)
|||++|..+
T Consensus 123 ME~v~G~~~ 131 (822)
T PLN02876 123 MEYLEGRIF 131 (822)
T ss_pred EEecCCccc
Confidence 999987654
No 465
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.21 E-value=3.2e-07 Score=87.67 Aligned_cols=184 Identities=19% Similarity=0.171 Sum_probs=127.9
Q ss_pred hhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCc-eeeEeeEeeeCCeeEEEEeccCcC-C
Q 048542 69 FTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVN-VVQLLGFCSEGSKRALVYEYMPNG-S 146 (373)
Q Consensus 69 ~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~n-i~~~~~~~~~~~~~~lv~e~~~~g-s 146 (373)
+-+..++|+++++++.+-........+.+... ....-++++|.+++||| .+..++-+..+...++.++++.++ +
T Consensus 246 ~fh~fvK~altknpKkRptaeklL~h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs 321 (829)
T KOG0576|consen 246 FFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS 321 (829)
T ss_pred HHHHHHHHHhcCCCccCCChhhheeceeeccc----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence 34567899999999987443333335544332 34456899999999999 666666677778889999999766 2
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceee
Q 048542 147 LDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 226 (373)
Q Consensus 147 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 226 (373)
-..... .....+...+...+...-+++++++|+. .=+|+| ||+..+ +..+..||+....+.+.. ..
T Consensus 322 ~~~~~~---~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---~~ 387 (829)
T KOG0576|consen 322 SALEMT---VSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM---KP 387 (829)
T ss_pred ccccCC---hhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc---cc
Confidence 222221 1122233444556666777889999975 457888 777754 678999999887654432 23
Q ss_pred ecccCCCCcccccccccccCCcCcccchHHHHHHHHHHHcCCCCCC
Q 048542 227 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSN 272 (373)
Q Consensus 227 ~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~~p~~ 272 (373)
+...+++.|+|||+.... .+..+.|+|+.|.-..++--|.+|-.
T Consensus 388 ~t~~~~~~~~~pev~~~~--~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 388 RTAIGTPEPLAPEVIQEN--TIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred ccCCCCCCCCCchhhccc--ccccCCCccCCCcchhhcCCCCCCCC
Confidence 455699999999988764 67778999999987777777766643
No 466
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.20 E-value=2.2e-05 Score=68.71 Aligned_cols=74 Identities=18% Similarity=0.213 Sum_probs=47.6
Q ss_pred cccCCCCcEE-EEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCC---ceeeEeeEeeeC---CeeEEEEeccC
Q 048542 71 HKLGQGGFGS-VYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHV---NVVQLLGFCSEG---SKRALVYEYMP 143 (373)
Q Consensus 71 ~~ig~G~~g~-V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~---ni~~~~~~~~~~---~~~~lv~e~~~ 143 (373)
+.|+.|+... ||+. +..+++|.... .....++.+|.+.+..+... .+...++..... ...+++|++++
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~ 77 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE 77 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence 4567777764 8875 34577886554 33456788999999887532 344445443332 23578999999
Q ss_pred cCCccc
Q 048542 144 NGSLDR 149 (373)
Q Consensus 144 ~gsL~~ 149 (373)
|.++.+
T Consensus 78 G~~l~~ 83 (235)
T cd05155 78 GETATA 83 (235)
T ss_pred CCCCCc
Confidence 877754
No 467
>PRK10593 hypothetical protein; Provisional
Probab=98.17 E-value=5.3e-05 Score=68.69 Aligned_cols=75 Identities=11% Similarity=0.085 Sum_probs=56.7
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCC---CceeeEeeEeee---CCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHH---VNVVQLLGFCSE---GSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~---~~~~~lv~e~~~~ 144 (373)
+.||.|..+.||.....++ .+++|..+. ......+..|...++.+.- -.++++++++.. .+..++|||++++
T Consensus 20 ~~i~~G~~~~vy~~~~~~~-~~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G 97 (297)
T PRK10593 20 ECISEQPYAALWALYDSQG-NPMPLMARS-FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRG 97 (297)
T ss_pred eecCCccceeEEEEEcCCC-CEEEEEecc-cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCC
Confidence 5799999999999876544 577777433 2244688899999998853 367888887754 3568999999988
Q ss_pred CCc
Q 048542 145 GSL 147 (373)
Q Consensus 145 gsL 147 (373)
.++
T Consensus 98 ~~~ 100 (297)
T PRK10593 98 VSV 100 (297)
T ss_pred Eec
Confidence 765
No 468
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.14 E-value=3.9e-05 Score=64.85 Aligned_cols=126 Identities=19% Similarity=0.274 Sum_probs=88.8
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCc-----------------cCHHHHHHHHHHhcccC------CCceeeEee
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSK-----------------FSAEEFINEVSTIGRIH------HVNVVQLLG 127 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~-----------------~~~~~~~~e~~~l~~l~------h~ni~~~~~ 127 (373)
..||+|+.-.||. ++++...+||+..... ....+..+|+.....+. +.+|.+++|
T Consensus 7 ~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G 84 (199)
T PF10707_consen 7 DLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG 84 (199)
T ss_pred cccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence 5699999999885 5566778999887655 22356667777666665 778999999
Q ss_pred EeeeCCeeEEEEeccCc--C----CccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeee
Q 048542 128 FCSEGSKRALVYEYMPN--G----SLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD 201 (373)
Q Consensus 128 ~~~~~~~~~lv~e~~~~--g----sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~ 201 (373)
+.+.+...-+|+|.+.+ | +|.+++. ...++. ...+.+ -+-..||-+. .|+.+|++|.||++.
T Consensus 85 ~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~-----~~~~~~-~~~~~L---~~f~~~l~~~---~Iv~~dl~~~NIv~~ 152 (199)
T PF10707_consen 85 FVETNLGLGLVVELIRDADGNISPTLEDYLK-----EGGLTE-ELRQAL---DEFKRYLLDH---HIVIRDLNPHNIVVQ 152 (199)
T ss_pred EEecCCceEEEEEEEECCCCCcCccHHHHHH-----cCCccH-HHHHHH---HHHHHHHHHc---CCeecCCCcccEEEE
Confidence 99998888999998632 3 4555551 223444 333333 3445667766 899999999999996
Q ss_pred CC--C--ceEEee
Q 048542 202 HN--F--IPKVSD 210 (373)
Q Consensus 202 ~~--~--~~kl~D 210 (373)
.+ + .+.|+|
T Consensus 153 ~~~~~~~~lvlID 165 (199)
T PF10707_consen 153 RRDSGEFRLVLID 165 (199)
T ss_pred ecCCCceEEEEEe
Confidence 32 2 577777
No 469
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.11 E-value=1.5e-05 Score=81.52 Aligned_cols=198 Identities=20% Similarity=0.192 Sum_probs=134.7
Q ss_pred HHHHHHhcccCCCceeeEeeEeeeCCeeE----EEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Q 048542 108 INEVSTIGRIHHVNVVQLLGFCSEGSKRA----LVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNG 183 (373)
Q Consensus 108 ~~e~~~l~~l~h~ni~~~~~~~~~~~~~~----lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~ 183 (373)
.-|...+.+..|+|+..++.|........ +..++|..-++...+ ..-..++....+.+..+..+|++|+|+.
T Consensus 230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~----q~v~~i~~~~~r~~~~~~~~GL~~~h~~ 305 (1351)
T KOG1035|consen 230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLL----QSVGSIPLETLRILHQKLLEGLAYLHSL 305 (1351)
T ss_pred HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHH----hhccccCHHHHHHHHHHHhhhHHHHHHh
Confidence 34667788889999999999886654433 345677777776666 3456688889999999999999999987
Q ss_pred CCCCeEecCcCCC---CeeeeCCCceEEe--eccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHH
Q 048542 184 CDVCILHFDIKPH---NILLDHNFIPKVS--DFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFG 258 (373)
Q Consensus 184 ~~~~ivH~dikp~---Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG 258 (373)
...|.-+..+ +-..+..+....+ ||+.+......... ....-+..|.+||.........+...|+|.+|
T Consensus 306 ---~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~---~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lg 379 (1351)
T KOG1035|consen 306 ---SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS---FSDLLAEIRNADEDLKENTAKKSRLTDLWCLG 379 (1351)
T ss_pred ---ccceeEEecccccccccCccceeecchhhhcccccCCCcccc---hhhcCccccccccccccccchhhhhhHHHHHH
Confidence 5666555555 4455566666666 88887765443321 12234456788888766544555567999999
Q ss_pred HHHHHHHcCCCCCCCCcCccccccchHHHHHHHhcCCCcccCccchhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 048542 259 MVLLEMAGGRRNSNMNATRSSKAYFPSWVYDQLNKGGDLELQNVTEIESMIARKLCMIGLWCIQVKAADRPSMTKVLEML 338 (373)
Q Consensus 259 ~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~L 338 (373)
.....+..|..+-....... ..+. ......+.+....|+..++++|++..+++...
T Consensus 380 ll~~~~~~~~~i~~~~~~~~----------~~l~--------------~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 380 LLLLQLSQGEDISEKSAVPV----------SLLD--------------VLSTSELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred HHHhhhhhcCcccccccchh----------hhhc--------------cccchhhhhhhhhhcchhhhhccchhhhhhch
Confidence 99999998875533221110 0000 00011467778889999999999999998754
Q ss_pred h
Q 048542 339 E 339 (373)
Q Consensus 339 ~ 339 (373)
-
T Consensus 436 f 436 (1351)
T KOG1035|consen 436 F 436 (1351)
T ss_pred h
Confidence 3
No 470
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.09 E-value=4.1e-05 Score=66.99 Aligned_cols=74 Identities=15% Similarity=0.206 Sum_probs=48.7
Q ss_pred cccCCCCcEEEEEEEEcC--CceeEEEEeccCccCHHHHHHHHHHhcccCCCc-eeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 71 HKLGQGGFGSVYKGQLQT--GGLIAVKMLENSKFSAEEFINEVSTIGRIHHVN-VVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~--~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~n-i~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
+.|..|-...+|+....+ ++.|++|+........-+..+|..+++.+...+ .+++++.+. ..++|||++|.++
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~l 79 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRTL 79 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCcC
Confidence 457788888999998664 678999977653322223347888888885333 344444332 2489999988766
Q ss_pred c
Q 048542 148 D 148 (373)
Q Consensus 148 ~ 148 (373)
.
T Consensus 80 ~ 80 (235)
T cd05157 80 E 80 (235)
T ss_pred C
Confidence 3
No 471
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.99 E-value=7.2e-05 Score=66.40 Aligned_cols=139 Identities=12% Similarity=0.104 Sum_probs=78.5
Q ss_pred ccCCCCcEEEEEEEEcCCceeEEEEeccCccCH-HHHHHHHHHhcccCCCce-eeEeeEeeeCCeeEEEEeccCcCCccc
Q 048542 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSA-EEFINEVSTIGRIHHVNV-VQLLGFCSEGSKRALVYEYMPNGSLDR 149 (373)
Q Consensus 72 ~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~-~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~lv~e~~~~gsL~~ 149 (373)
.+..|-.+.+|+... ++..+++|......... -+..+|..+++.+....+ ++++.... .++|+||++|..+..
T Consensus 3 ~~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~ 77 (256)
T TIGR02721 3 TLSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITL 77 (256)
T ss_pred cCCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCccccc
Confidence 355678888998874 46788899765432221 234678888888854333 34443322 368999998876643
Q ss_pred cc-----------------cCCCCCCCCCCHH-HHHHHHHHH---------HHHHHHHHcC-----CCCCeEecCcCCCC
Q 048542 150 HV-----------------FPKESRGQSLCWE-KLHEVALGT---------ARGIEYLHNG-----CDVCILHFDIKPHN 197 (373)
Q Consensus 150 ~l-----------------~~~~~~~~~l~~~-~~~~i~~~i---------~~al~~LH~~-----~~~~ivH~dikp~N 197 (373)
.. +.....+.++... .+.....++ ...+..+-.. ....++|+|+.|.|
T Consensus 78 ~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~N 157 (256)
T TIGR02721 78 DQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYN 157 (256)
T ss_pred ccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCc
Confidence 20 1111111122211 111111111 1111112111 12368999999999
Q ss_pred eeeeCCCceEEeeccCccc
Q 048542 198 ILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 198 il~~~~~~~kl~Dfg~~~~ 216 (373)
|++++++ +.++||..+..
T Consensus 158 il~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 158 LVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred EEEeCCC-CEEEeccccCc
Confidence 9999876 78999998763
No 472
>PRK05231 homoserine kinase; Provisional
Probab=97.91 E-value=0.0002 Score=65.71 Aligned_cols=142 Identities=15% Similarity=0.199 Sum_probs=77.7
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCc--eeeEee------EeeeCCeeEEEEecc
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVN--VVQLLG------FCSEGSKRALVYEYM 142 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~n--i~~~~~------~~~~~~~~~lv~e~~ 142 (373)
+.++.|....+|+....+| .+++|+.. ....+....|...+..|...+ +++.+. +....+..+++++|+
T Consensus 28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~--~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l 104 (319)
T PRK05231 28 KGIAEGIENSNFFLTTTQG-EYVLTLFE--RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTFL 104 (319)
T ss_pred chhccccccceEEEEeCCC-cEEEEEec--cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEec
Confidence 4567788788999876644 78999876 233444455666666653211 333332 122345678999999
Q ss_pred CcCCcccc----c----------cCCCC-------CCCCCCH-HHHHH------------HHHH-HHHHHHHHHcC----
Q 048542 143 PNGSLDRH----V----------FPKES-------RGQSLCW-EKLHE------------VALG-TARGIEYLHNG---- 183 (373)
Q Consensus 143 ~~gsL~~~----l----------~~~~~-------~~~~l~~-~~~~~------------i~~~-i~~al~~LH~~---- 183 (373)
+|..+... . +.... ....+.+ ..... ...+ +...+..+...
T Consensus 105 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 184 (319)
T PRK05231 105 EGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWPA 184 (319)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccccc
Confidence 88654211 0 00000 0001111 11110 1111 11122222211
Q ss_pred CCCCeEecCcCCCCeeeeCCCceEEeeccCcc
Q 048542 184 CDVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215 (373)
Q Consensus 184 ~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 215 (373)
...+++|+|+.|.||+++.+...-++||+.+.
T Consensus 185 lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 185 LPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred CCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 23489999999999999876656899999875
No 473
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.88 E-value=0.00021 Score=64.81 Aligned_cols=143 Identities=19% Similarity=0.195 Sum_probs=85.4
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCc--eeeEeeE------eeeCCeeEEEEecc
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVN--VVQLLGF------CSEGSKRALVYEYM 142 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~n--i~~~~~~------~~~~~~~~lv~e~~ 142 (373)
+.+..|....+|+.... ++.+++|+... .+.+....|+.++..+.+.+ +++++.. ...++..+++++|+
T Consensus 20 ~~i~~G~~n~~y~v~~~-~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i 96 (296)
T cd05153 20 EGISAGIENTNYFVTTD-SGRYVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFL 96 (296)
T ss_pred ecccCccccceEEEEeC-CCcEEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeC
Confidence 56777888899998765 45789998765 34566777888888874322 3444331 12345568999999
Q ss_pred CcCCccccc--------------c----CCCC---CCCCCCHHHHH----------HHHHHHHHHHHHHHc----CCCCC
Q 048542 143 PNGSLDRHV--------------F----PKES---RGQSLCWEKLH----------EVALGTARGIEYLHN----GCDVC 187 (373)
Q Consensus 143 ~~gsL~~~l--------------~----~~~~---~~~~l~~~~~~----------~i~~~i~~al~~LH~----~~~~~ 187 (373)
+|..+...- + .... ......|.... .....+..++.++.. ....+
T Consensus 97 ~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (296)
T cd05153 97 AGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRG 176 (296)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCc
Confidence 887654300 0 0000 00011111110 011122334444443 12347
Q ss_pred eEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 188 ILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 188 ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
++|+|+.|.|+++++++.+.|+||+.+..
T Consensus 177 l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 177 VIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred CCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 99999999999999887778999998753
No 474
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.83 E-value=0.00029 Score=64.38 Aligned_cols=143 Identities=20% Similarity=0.253 Sum_probs=82.1
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCC--ceeeEeeEe------eeCCeeEEEEecc
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHV--NVVQLLGFC------SEGSKRALVYEYM 142 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~--ni~~~~~~~------~~~~~~~lv~e~~ 142 (373)
+.++.|....+|+.... ++.+++|+.... ...+....|.+++..|... .+++++... ...+..+++++|+
T Consensus 28 ~~~~~G~~n~~y~v~t~-~~~~vLK~~~~~-~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i 105 (307)
T TIGR00938 28 KGIAEGVENSNYLLTTD-VGRYILTLYEKR-VKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFL 105 (307)
T ss_pred cccCCccccceEEEEeC-CCcEEEEEecCC-CCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEeC
Confidence 55777777899998765 446888977552 2345556677777777422 233443321 2245678999999
Q ss_pred CcCCccccc--------------cC------CCCCC--CCCCHHHHH------------HHHHHHHHHHHHHHc----CC
Q 048542 143 PNGSLDRHV--------------FP------KESRG--QSLCWEKLH------------EVALGTARGIEYLHN----GC 184 (373)
Q Consensus 143 ~~gsL~~~l--------------~~------~~~~~--~~l~~~~~~------------~i~~~i~~al~~LH~----~~ 184 (373)
+|..+.... +. ..... ..-.|.... .....+.+.+.++.. ..
T Consensus 106 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~ 185 (307)
T TIGR00938 106 QGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRDL 185 (307)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence 886543110 00 00000 000111100 011122334544532 12
Q ss_pred CCCeEecCcCCCCeeeeCCCceEEeeccCcc
Q 048542 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAK 215 (373)
Q Consensus 185 ~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 215 (373)
..+++|+|+++.|++++.++...++||+.+.
T Consensus 186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred CCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 3589999999999999988777899999875
No 475
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.79 E-value=0.0002 Score=65.27 Aligned_cols=141 Identities=21% Similarity=0.262 Sum_probs=83.5
Q ss_pred cccCCCCcEEEEEEEEcC-------CceeEEEEeccCccCHHHHHHHHHHhcccCCCc-eeeEeeEeeeCCeeEEEEecc
Q 048542 71 HKLGQGGFGSVYKGQLQT-------GGLIAVKMLENSKFSAEEFINEVSTIGRIHHVN-VVQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~-------~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~n-i~~~~~~~~~~~~~~lv~e~~ 142 (373)
+.+..|-...+|+....+ ++.+++|+.........+..+|..++..+.... .+++++++.. ..|++|+
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~i 79 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEFI 79 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhee
Confidence 345567777899987654 578999997765433345678888888885333 3345554432 3689999
Q ss_pred CcCCccccc-----------------cCCCCC--C---CCC--CHHHHHH--------------------------HHHH
Q 048542 143 PNGSLDRHV-----------------FPKESR--G---QSL--CWEKLHE--------------------------VALG 172 (373)
Q Consensus 143 ~~gsL~~~l-----------------~~~~~~--~---~~l--~~~~~~~--------------------------i~~~ 172 (373)
+|.++.... +..... . ... -+..... ....
T Consensus 80 ~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (302)
T cd05156 80 PSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLED 159 (302)
T ss_pred CCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHH
Confidence 887664311 000000 0 001 0111111 1112
Q ss_pred HHHHHHHHHc------CCCCCeEecCcCCCCeeeeCC----CceEEeeccCcc
Q 048542 173 TARGIEYLHN------GCDVCILHFDIKPHNILLDHN----FIPKVSDFGLAK 215 (373)
Q Consensus 173 i~~al~~LH~------~~~~~ivH~dikp~Nil~~~~----~~~kl~Dfg~~~ 215 (373)
+...+..+-. .....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 160 ~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 160 EAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred HHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 2222334432 134579999999999999874 789999999875
No 476
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.76 E-value=0.0004 Score=65.10 Aligned_cols=73 Identities=14% Similarity=0.158 Sum_probs=53.9
Q ss_pred cccCCCCcEEEEEEEEcCC-ceeEEEEeccC--------ccCHHHHHHHHHHhcccC---CCceeeEeeEeeeCCeeEEE
Q 048542 71 HKLGQGGFGSVYKGQLQTG-GLIAVKMLENS--------KFSAEEFINEVSTIGRIH---HVNVVQLLGFCSEGSKRALV 138 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~-~~vaiK~~~~~--------~~~~~~~~~e~~~l~~l~---h~ni~~~~~~~~~~~~~~lv 138 (373)
+.||.|.+..||++...+| +.++||.-... ....++...|.+.|+.+. ..++++++.+ +....++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence 5789999999999998866 48999984311 234567778888888763 2457777766 44567899
Q ss_pred EeccCcC
Q 048542 139 YEYMPNG 145 (373)
Q Consensus 139 ~e~~~~g 145 (373)
||++++.
T Consensus 110 ME~L~~~ 116 (401)
T PRK09550 110 MEDLSDH 116 (401)
T ss_pred EecCCCc
Confidence 9998763
No 477
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.73 E-value=0.00043 Score=58.20 Aligned_cols=124 Identities=27% Similarity=0.404 Sum_probs=86.0
Q ss_pred HHhhhhcccCCCCc-EEEEEEEEcCCceeEEEEecc---Cc-------------------cCHHHHHHHHHHhcccC---
Q 048542 65 MTNHFTHKLGQGGF-GSVYKGQLQTGGLIAVKMLEN---SK-------------------FSAEEFINEVSTIGRIH--- 118 (373)
Q Consensus 65 ~~~~~~~~ig~G~~-g~V~~~~~~~~~~vaiK~~~~---~~-------------------~~~~~~~~e~~~l~~l~--- 118 (373)
...++.+.||.|.- |.||+++.. |..||+|+++. .. .....|..|.+...+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 45677899999999 999999987 77999999321 00 00134778888888774
Q ss_pred CCce--eeEeeEeeeC------------------CeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 048542 119 HVNV--VQLLGFCSEG------------------SKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIE 178 (373)
Q Consensus 119 h~ni--~~~~~~~~~~------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~ 178 (373)
+.++ ++.+||..-. ....||.||.+... .++.. -+.+|.+-+.
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------------~~~~~----~~~~~~~dl~ 178 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------------PLQIR----DIPQMLRDLK 178 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------------ccchh----HHHHHHHHHH
Confidence 4455 8889887322 11346777765422 12223 3445666678
Q ss_pred HHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCc
Q 048542 179 YLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLA 214 (373)
Q Consensus 179 ~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 214 (373)
.+|.. ||+-+|+++.|.. .-||+|||.+
T Consensus 179 ~~~k~---gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 179 ILHKL---GIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHC---CeeeccCcccccc-----CCEEEecccC
Confidence 89988 9999999999985 3478999854
No 478
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.62 E-value=0.00053 Score=62.34 Aligned_cols=139 Identities=19% Similarity=0.234 Sum_probs=97.2
Q ss_pred hcccCCCCcEEEEEEEEcCCceeEEEEeccCcc----------------------CHH-----HHHHHHHHhcccCCCce
Q 048542 70 THKLGQGGFGSVYKGQLQTGGLIAVKMLENSKF----------------------SAE-----EFINEVSTIGRIHHVNV 122 (373)
Q Consensus 70 ~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~----------------------~~~-----~~~~e~~~l~~l~h~ni 122 (373)
...|..|--+.||.+...+|..+|||+++.+-. +.. -...|++-|++++...|
T Consensus 149 nGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGI 228 (520)
T KOG2270|consen 149 NGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGI 228 (520)
T ss_pred ccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 356888888999999998999999999753211 111 12458888888875554
Q ss_pred eeEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeC
Q 048542 123 VQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDH 202 (373)
Q Consensus 123 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~ 202 (373)
+-.--... ....|||+|+.... .....-+...++...+..+-.+++.-+.-|.+.| .+||.||+--|+|+ .
T Consensus 229 P~PePIlL--k~hVLVM~FlGrdg----w~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Ly-h 299 (520)
T KOG2270|consen 229 PCPEPILL--KNHVLVMEFLGRDG----WAAPKLKDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLY-H 299 (520)
T ss_pred CCCCceee--ecceEeeeeccCCC----CcCcccccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheE-E
Confidence 32211111 23469999995322 1222335666777788888888888888887664 89999999999999 5
Q ss_pred CCceEEeeccCcccC
Q 048542 203 NFIPKVSDFGLAKFH 217 (373)
Q Consensus 203 ~~~~kl~Dfg~~~~~ 217 (373)
+|.+.++|.+.+.-.
T Consensus 300 dG~lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 300 DGKLYIIDVSQSVEH 314 (520)
T ss_pred CCEEEEEEccccccC
Confidence 678999998877543
No 479
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.61 E-value=7.6e-05 Score=66.53 Aligned_cols=134 Identities=16% Similarity=0.108 Sum_probs=93.1
Q ss_pred hhhhcccCCCCcEEEEEEEEcCCceeEEEEeccCccCH-----------------------HHHHHHHHHhcccCC--Cc
Q 048542 67 NHFTHKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSA-----------------------EEFINEVSTIGRIHH--VN 121 (373)
Q Consensus 67 ~~~~~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~-----------------------~~~~~e~~~l~~l~h--~n 121 (373)
+.+.++||-|--+.+|.+....|++.++|+-+....+. -...+|+..|+.|.. --
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp 173 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP 173 (465)
T ss_pred hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence 45678999999999999999999999999754322111 123468888888742 22
Q ss_pred eeeEeeEeeeCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeee
Q 048542 122 VVQLLGFCSEGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD 201 (373)
Q Consensus 122 i~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~ 201 (373)
+++.++ ...-++|||++.+-.|...- ...... .+...+..-+.-|-.+ |++|+|..-=||++.
T Consensus 174 VPkpiD----~~RH~Vvmelv~g~Pl~~v~-------~v~d~~---~ly~~lm~~Iv~la~~---GlIHgDFNEFNimv~ 236 (465)
T KOG2268|consen 174 VPKPID----HNRHCVVMELVDGYPLRQVR-------HVEDPP---TLYDDLMGLIVRLANH---GLIHGDFNEFNIMVK 236 (465)
T ss_pred CCCccc----ccceeeHHHhhcccceeeee-------ecCChH---HHHHHHHHHHHHHHHc---CceecccchheeEEe
Confidence 444443 35568999999887775432 111222 2333444445556666 999999999999999
Q ss_pred CCCceEEeeccCcccC
Q 048542 202 HNFIPKVSDFGLAKFH 217 (373)
Q Consensus 202 ~~~~~kl~Dfg~~~~~ 217 (373)
+++.++++||-.+...
T Consensus 237 dd~~i~vIDFPQmvS~ 252 (465)
T KOG2268|consen 237 DDDKIVVIDFPQMVST 252 (465)
T ss_pred cCCCEEEeechHhhcc
Confidence 9999999999866543
No 480
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.38 E-value=0.0011 Score=59.51 Aligned_cols=72 Identities=18% Similarity=0.340 Sum_probs=46.4
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccC---CCceeeEeeEeeeCCeeEEEEeccCcC
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIH---HVNVVQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~---h~ni~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
+.++.|....+|+.. .+++.+.+|+-... ....+..|..-|+.|. .-.+++++++....+..++++||++.+
T Consensus 23 ~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~--~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 23 EPVSGGDINEAYRLD-TDGGSYFVKVNSES--GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp EEE--SSSSEEEEEE-TTS-EEEEEEEEGG--GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred EecCCCChhheEEEE-CCCccEEEEecChh--hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 568888899999987 55788999987632 2356677888777773 446888888887777789999998765
No 481
>PLN02236 choline kinase
Probab=97.22 E-value=0.003 Score=58.56 Aligned_cols=142 Identities=18% Similarity=0.254 Sum_probs=80.9
Q ss_pred cccCCCCcEEEEEEEEcC-----CceeEEEEeccCccCHHHHHHHHHHhcccCCCce-eeEeeEeeeCCeeEEEEeccCc
Q 048542 71 HKLGQGGFGSVYKGQLQT-----GGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNV-VQLLGFCSEGSKRALVYEYMPN 144 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~lv~e~~~~ 144 (373)
+.+-.|-...+|+....+ +..+++|+........-+-.+|..+++.+...++ +++++.+..+ .|.+|+++
T Consensus 42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g 117 (344)
T PLN02236 42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHA 117 (344)
T ss_pred EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCC
Confidence 445557788899987542 3678999876543222223678888888854333 3455555332 57999877
Q ss_pred CCcccc-c----------------cCCC--CCCCCCCHHHHHHHHHHH-----------------HHHHHHH----Hc-C
Q 048542 145 GSLDRH-V----------------FPKE--SRGQSLCWEKLHEVALGT-----------------ARGIEYL----HN-G 183 (373)
Q Consensus 145 gsL~~~-l----------------~~~~--~~~~~l~~~~~~~i~~~i-----------------~~al~~L----H~-~ 183 (373)
.++... + +... .......+..+..+..++ ...+..| .. .
T Consensus 118 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~ 197 (344)
T PLN02236 118 RTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDD 197 (344)
T ss_pred CCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccC
Confidence 666421 0 1100 001112233333332211 1111122 21 1
Q ss_pred CCCCeEecCcCCCCeeeeC-CCceEEeeccCccc
Q 048542 184 CDVCILHFDIKPHNILLDH-NFIPKVSDFGLAKF 216 (373)
Q Consensus 184 ~~~~ivH~dikp~Nil~~~-~~~~kl~Dfg~~~~ 216 (373)
....++|+|+++.||++++ ++.+.++||..+..
T Consensus 198 ~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 198 QEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred CCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 2347899999999999986 46899999998764
No 482
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.17 E-value=0.0058 Score=55.42 Aligned_cols=133 Identities=22% Similarity=0.241 Sum_probs=85.0
Q ss_pred CCCcEEEEEEEEcCCceeEEEEecc---CccCHHHHHHHHHHhcccCC--CceeeEeeEeeeCC--eeEEEEeccCcCCc
Q 048542 75 QGGFGSVYKGQLQTGGLIAVKMLEN---SKFSAEEFINEVSTIGRIHH--VNVVQLLGFCSEGS--KRALVYEYMPNGSL 147 (373)
Q Consensus 75 ~G~~g~V~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~h--~ni~~~~~~~~~~~--~~~lv~e~~~~gsL 147 (373)
.|..-.+|..... +++++++ ... ......+..+|+.+++.+.- --+...+++|.++. ..+.||+|++|..+
T Consensus 35 ~G~sn~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~ 112 (321)
T COG3173 35 GGWSNDTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVV 112 (321)
T ss_pred CCcccceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceec
Confidence 3333345555444 7888888 331 12233566778888888742 23455677776665 77999999988655
Q ss_pred cccccCCCCCCCCCCHHHHHHHH-HHHHHHHHHHHcCC------------------------------------------
Q 048542 148 DRHVFPKESRGQSLCWEKLHEVA-LGTARGIEYLHNGC------------------------------------------ 184 (373)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~~i~-~~i~~al~~LH~~~------------------------------------------ 184 (373)
.+.+.... . . .+.+ ..+++.|+-||+-.
T Consensus 113 ~~~~~~~~-----~--~--~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~ 183 (321)
T COG3173 113 WSALPPES-----L--G--RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRL 183 (321)
T ss_pred cCcCCccc-----c--h--HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHH
Confidence 43331110 1 1 1222 36666677777531
Q ss_pred -------------CCCeEecCcCCCCeeeeCCCceEEeeccCcccCC
Q 048542 185 -------------DVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 218 (373)
Q Consensus 185 -------------~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 218 (373)
...++|+|+++.|++++.++-+=+.||+++..-.
T Consensus 184 ~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD 230 (321)
T COG3173 184 IKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD 230 (321)
T ss_pred HHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence 1359999999999999988889999999987543
No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.16 E-value=0.0053 Score=55.05 Aligned_cols=70 Identities=11% Similarity=-0.003 Sum_probs=40.4
Q ss_pred cCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCC--Cc-eeeEeeEeeeCCeeEEEEeccCcCCc
Q 048542 73 LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHH--VN-VVQLLGFCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 73 ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h--~n-i~~~~~~~~~~~~~~lv~e~~~~gsL 147 (373)
.++|-...|+.....+|..+++|.-+. ........+|..++..+.. +- ++++.. .+ ..+++|++++|..+
T Consensus 19 ~~~g~~~~v~~i~~~~g~~~VlR~p~~-~~~~~~l~rE~~vL~~L~~~l~vpvP~~~~--~~--~~~~~y~~i~G~p~ 91 (276)
T cd05152 19 NESGLDFQVVFAKDTDGVPWVLRIPRR-PDVSERAAAEKRVLALVRKHLPVQVPDWRV--HT--PELIAYPKLPGVPA 91 (276)
T ss_pred cCCcceeEEEEEEcCCCCeEEEEecCC-HHHHHHHHHHHHHHHHHHhcCCCCCCceee--ec--CceEEEeccCCCcc
Confidence 344444556665555688899987653 2234567889999998852 21 122221 11 22567777766544
No 484
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.93 E-value=7.7e-05 Score=78.40 Aligned_cols=161 Identities=12% Similarity=0.033 Sum_probs=113.9
Q ss_pred HHHHHHHhcccCCCceeeEeeEeee--CCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCC
Q 048542 107 FINEVSTIGRIHHVNVVQLLGFCSE--GSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGC 184 (373)
Q Consensus 107 ~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~ 184 (373)
...|....+...|+++...+.-... ....+..++|+.+|.+.+.+.+...+...+....+.....+...+..-+|+..
T Consensus 1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence 3445555556678887665544322 33467899999999999988766655555655555555555466666666543
Q ss_pred C--CCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHHHHH
Q 048542 185 D--VCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLL 262 (373)
Q Consensus 185 ~--~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~~l~ 262 (373)
+ .-.+|+++|+-|.++..+.++|+.++|+.+...+.... .....+++-|++|++...- .++.++|+|..|+.+|
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf--~Gl~l~sp~~v~qli~N~i--k~t~rsdilr~s~~ly 1431 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSF--FGLELCSPIYVLQLIKNEI--KFTKRSDILRRSLSLY 1431 (2724)
T ss_pred cCCccchhhhhhhhccceecCCcccccccccccccCchHhh--hhhhhCCHHHHHHHHHHHH--hhhhHHHHHHHHHHHH
Confidence 2 23689999999999999999999999999833222211 2234577788899987654 6777899999999999
Q ss_pred HHHcCCCCC
Q 048542 263 EMAGGRRNS 271 (373)
Q Consensus 263 ~ll~g~~p~ 271 (373)
.+..|..+|
T Consensus 1432 ~rs~~n~~f 1440 (2724)
T KOG1826|consen 1432 LRSDGNAYF 1440 (2724)
T ss_pred HHhcccHHH
Confidence 999887665
No 485
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=96.93 E-value=0.016 Score=53.02 Aligned_cols=141 Identities=21% Similarity=0.330 Sum_probs=83.5
Q ss_pred ccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCc------eeeEee----EeeeCCeeEEEEec
Q 048542 72 KLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVN------VVQLLG----FCSEGSKRALVYEY 141 (373)
Q Consensus 72 ~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~n------i~~~~~----~~~~~~~~~lv~e~ 141 (373)
.|.+ .-..+|+....+|+. ++|+.+.. .+..++..|...+..|.-.. +...=| ....+.+.+-+++|
T Consensus 33 ~l~s-~eN~~f~~~~~~g~~-iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~ 109 (331)
T COG2334 33 GLNS-EENSNFRVQTEDGRY-ILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEY 109 (331)
T ss_pred cccc-ccCceEEEEecCCCe-EEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEe
Confidence 3444 455688888776665 99999887 77788888888888883211 222211 11112377789999
Q ss_pred cCcCCccc-ccc------------------C----CCCCCCCCCHHH-------------HHHHHHHHHHHHHHHHcCC-
Q 048542 142 MPNGSLDR-HVF------------------P----KESRGQSLCWEK-------------LHEVALGTARGIEYLHNGC- 184 (373)
Q Consensus 142 ~~~gsL~~-~l~------------------~----~~~~~~~l~~~~-------------~~~i~~~i~~al~~LH~~~- 184 (373)
++|..+.. .-. . +........|.. -.....++...+..+.+..
T Consensus 110 l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~ 189 (331)
T COG2334 110 LPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLP 189 (331)
T ss_pred cCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhch
Confidence 99887763 110 0 001111122220 0012223334444444321
Q ss_pred ---CCC---eEecCcCCCCeeeeCCCc-eEEeeccCcc
Q 048542 185 ---DVC---ILHFDIKPHNILLDHNFI-PKVSDFGLAK 215 (373)
Q Consensus 185 ---~~~---ivH~dikp~Nil~~~~~~-~kl~Dfg~~~ 215 (373)
... ++|+|+.|.||+++.+.. ..++||+-+.
T Consensus 190 ~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 190 AHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred hhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 123 999999999999998874 8899999775
No 486
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.91 E-value=0.011 Score=53.88 Aligned_cols=29 Identities=34% Similarity=0.305 Sum_probs=25.6
Q ss_pred CCeEecCcCCCCeeeeCCCceEEeeccCcc
Q 048542 186 VCILHFDIKPHNILLDHNFIPKVSDFGLAK 215 (373)
Q Consensus 186 ~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 215 (373)
.+++|+|+.+.||+++. +.+.++||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 48999999999999987 678899999765
No 487
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.85 E-value=0.0096 Score=54.91 Aligned_cols=143 Identities=13% Similarity=0.214 Sum_probs=79.1
Q ss_pred cccCCCCcEEEEEEEEcC----CceeEEEEeccCccCHHHHHHHHHHhcccCCCce-eeEeeEeeeCCeeEEEEeccCcC
Q 048542 71 HKLGQGGFGSVYKGQLQT----GGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNV-VQLLGFCSEGSKRALVYEYMPNG 145 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~----~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~lv~e~~~~g 145 (373)
+.|..|-...+|+....+ +..|++|+........-+-.+|..+++.+..-++ +++++++.. . +|.+|+++.
T Consensus 20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l~~~~~-G---~i~~fi~g~ 95 (330)
T PLN02421 20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLLGVFGN-G---MIQSFINAR 95 (330)
T ss_pred EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCceeEEeCC-c---EeehhhcCC
Confidence 445557777899886542 2379999876543222233578888888864444 345555432 2 588998776
Q ss_pred Ccccc-------c----------cCCC--CCCCCCCHHHHHHHHHHH-------------------------HHHHHHHH
Q 048542 146 SLDRH-------V----------FPKE--SRGQSLCWEKLHEVALGT-------------------------ARGIEYLH 181 (373)
Q Consensus 146 sL~~~-------l----------~~~~--~~~~~l~~~~~~~i~~~i-------------------------~~al~~LH 181 (373)
.+... + +... .....-.+..+..+..++ +..+..+.
T Consensus 96 ~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 175 (330)
T PLN02421 96 TLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEIT 175 (330)
T ss_pred CCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHHh
Confidence 55321 0 0100 001111222222222111 11111121
Q ss_pred c--CCCCCeEecCcCCCCeeeeC-CCceEEeeccCcccC
Q 048542 182 N--GCDVCILHFDIKPHNILLDH-NFIPKVSDFGLAKFH 217 (373)
Q Consensus 182 ~--~~~~~ivH~dikp~Nil~~~-~~~~kl~Dfg~~~~~ 217 (373)
. ..+..++|.|+.+.||++++ ++.++++||..|...
T Consensus 176 ~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~n 214 (330)
T PLN02421 176 DSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYS 214 (330)
T ss_pred ccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCC
Confidence 1 11235899999999999974 578999999988643
No 488
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.80 E-value=0.017 Score=52.81 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=28.5
Q ss_pred CCCeEecCcCCCCeeeeCCCceEEeeccCccc
Q 048542 185 DVCILHFDIKPHNILLDHNFIPKVSDFGLAKF 216 (373)
Q Consensus 185 ~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 216 (373)
..+++|+|+.++|+++++++.+.++||..+..
T Consensus 195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 35899999999999999998999999998763
No 489
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.67 E-value=0.0032 Score=54.08 Aligned_cols=123 Identities=17% Similarity=0.236 Sum_probs=60.7
Q ss_pred CceeEEEEeccCccCHHHHHHHHHHhcccCCCce-eeEeeEeeeCCeeEEEEeccCcCCcccc-ccC-------------
Q 048542 89 GGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNV-VQLLGFCSEGSKRALVYEYMPNGSLDRH-VFP------------- 153 (373)
Q Consensus 89 ~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~------------- 153 (373)
++.|++|+........-+...|..+++.+...++ +++++.+.++ .|.+|+++.+|... +..
T Consensus 2 ~~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~g~~p~~~~~~~~g----~v~e~i~g~~l~~~~~~~~~~~~~iA~~l~~ 77 (211)
T PF01633_consen 2 PEKYLVRIPGEGTENFIDRENENEALKLLSEAGLGPKIIYFFENG----RVEEFIEGRTLSPEDFRNPEILKRIAKLLAK 77 (211)
T ss_dssp TSEEEEEEEESCGCSHHHHHHHHHHHHHHHHTTSSS-EEEEETTE----EEEE--SSEE--CGGGGSHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCcccccCHHHHHHHHHHHHHcCCCCeEEEEcCCC----cEEEEecccccChhhccChHHHHHHHHHHHH
Confidence 4678899888775555666788898888864443 4455544332 56799876655321 100
Q ss_pred ---C-C--CCCCCCCHHHHHHH----------------------HHHHHHHHHHHHc-----CCCCCeEecCcCCCCeee
Q 048542 154 ---K-E--SRGQSLCWEKLHEV----------------------ALGTARGIEYLHN-----GCDVCILHFDIKPHNILL 200 (373)
Q Consensus 154 ---~-~--~~~~~l~~~~~~~i----------------------~~~i~~al~~LH~-----~~~~~ivH~dikp~Nil~ 200 (373)
. . .......+..+..+ ...+.+-+..+.+ ..+..++|+|+.|.||++
T Consensus 78 lH~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~v~cHnDl~~~Nil~ 157 (211)
T PF01633_consen 78 LHSIPISPNSKKPDLWDRIDKYMNKKSEFLFKRKKKKKSIDKEDLEDLQEELEELEKLLEKSNSPLVFCHNDLNPGNILI 157 (211)
T ss_dssp HHTHHHTTSSSS-HHHHHHHHHHHHHHTCCCCHHTTTCHHHHHHHHHHHHHHHHHHHHHHTSCGGEEEE-S--SGGGEEE
T ss_pred HhhcccccccCcchHHHHhhhhccchhhhhhhhhhhccccccCCHHHHHHHHhhhhhhhhccCCCceEeeccCccccEEe
Confidence 0 0 00111111111111 0111111111111 012368999999999999
Q ss_pred -eCCCceEEeeccCcc
Q 048542 201 -DHNFIPKVSDFGLAK 215 (373)
Q Consensus 201 -~~~~~~kl~Dfg~~~ 215 (373)
+.++.++++||..|.
T Consensus 158 ~~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 158 NNKDGEVKLIDFEYAG 173 (211)
T ss_dssp TSSSSCEEE--GTT-E
T ss_pred ccCCCeEEEecHHHHh
Confidence 888999999999875
No 490
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.66 E-value=0.062 Score=49.43 Aligned_cols=72 Identities=15% Similarity=0.163 Sum_probs=47.4
Q ss_pred CCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccCCCc--eeeEe---e--EeeeCCeeEEEEeccCcCCc
Q 048542 76 GGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIHHVN--VVQLL---G--FCSEGSKRALVYEYMPNGSL 147 (373)
Q Consensus 76 G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~n--i~~~~---~--~~~~~~~~~lv~e~~~~gsL 147 (373)
+.-..||+....+++.+++|+.+....+...+..|...+..|.... ++... | +...++..+.++++++|...
T Consensus 36 s~eN~vy~v~~~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~~ 114 (325)
T PRK11768 36 SYENRVYQFGDEDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRAP 114 (325)
T ss_pred cccceEEEEecCCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCCCC
Confidence 3445789988777888999988766666777788888887774211 22211 1 12234567789999877543
No 491
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.61 E-value=0.044 Score=51.55 Aligned_cols=71 Identities=15% Similarity=0.212 Sum_probs=49.7
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEecc-----Cc---cCHHHHHHHHHHhcccC---CCceeeEeeEeeeCCeeEEEE
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLEN-----SK---FSAEEFINEVSTIGRIH---HVNVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~-----~~---~~~~~~~~e~~~l~~l~---h~ni~~~~~~~~~~~~~~lv~ 139 (373)
+.||.|....||+.... ++.++||.-.. +. .+..+-..|.+.|+.+. ..++++++.++. ...+++|
T Consensus 38 ~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlvM 114 (418)
T PLN02756 38 KEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIGM 114 (418)
T ss_pred EEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEEE
Confidence 67899999999998864 56799997652 11 23344455677776653 247888888776 3457889
Q ss_pred eccCc
Q 048542 140 EYMPN 144 (373)
Q Consensus 140 e~~~~ 144 (373)
|++++
T Consensus 115 E~L~~ 119 (418)
T PLN02756 115 RYLEP 119 (418)
T ss_pred eecCC
Confidence 99966
No 492
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=96.58 E-value=0.012 Score=49.95 Aligned_cols=151 Identities=16% Similarity=0.232 Sum_probs=88.1
Q ss_pred CCcEEEEEEEEcCCceeEEEEeccCccC--HHHHHHHHHHhcccCCCceeeEeeEeeeCCeeEEEEeccCcCCccccccC
Q 048542 76 GGFGSVYKGQLQTGGLIAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHVFP 153 (373)
Q Consensus 76 G~~g~V~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 153 (373)
|+.++.-.+..+- .+..+|.++..... ..-+.++..++.+++ .|+++.. .+.-..-++.|+|-....
T Consensus 73 ~gNsTl~~~kt~i-G~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~N--Dn~~~yGvIlE~Cy~~~i------ 141 (308)
T PF07387_consen 73 NGNSTLLIGKTKI-GPLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKN--DNNYKYGVILERCYKIKI------ 141 (308)
T ss_pred CCceEEEEecccc-chhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeec--CCCceeEEEEeeccCccc------
Confidence 3444444444332 34455555554433 356778888888874 5666652 233345588898833111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEeeccCcccCCCCCCceeeecccCCC
Q 048542 154 KESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTI 233 (373)
Q Consensus 154 ~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~ 233 (373)
.. ..++.-=+++|.-.|+. ..+.+|+|..|+||+-|..|.+||.|=+... . .+.
T Consensus 142 --------~~---~N~i~agi~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll--~------------~~V 195 (308)
T PF07387_consen 142 --------NF---SNFITAGIKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCLL--E------------NQV 195 (308)
T ss_pred --------ch---hHHHHHhHHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhhh--h------------hee
Confidence 00 11111114668888954 4589999999999999999999999965432 0 111
Q ss_pred CcccccccccccCCcCcccchHHHHHHHHHHHcCC
Q 048542 234 GYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 268 (373)
Q Consensus 234 ~y~aPE~~~~~~~~~s~~~DvwslG~~l~~ll~g~ 268 (373)
.|.--| +...++++.+-+|-.-++++....
T Consensus 196 ~~vN~~-----Y~~lT~~aE~~~fv~s~l~~v~~~ 225 (308)
T PF07387_consen 196 NMVNIE-----YESLTQEAEVKVFVKSCLKLVEKQ 225 (308)
T ss_pred eEEeee-----ccccChHHHHHHHHHHHHHHHHHH
Confidence 122211 124566777777776667666543
No 493
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.35 E-value=0.038 Score=51.01 Aligned_cols=71 Identities=18% Similarity=0.129 Sum_probs=48.1
Q ss_pred ccCCCCcEEEEEEEEcCC-ceeEEEEecc--------CccCHHHHHHHHHHhcccC--CC-ceeeEeeEeeeCCeeEEEE
Q 048542 72 KLGQGGFGSVYKGQLQTG-GLIAVKMLEN--------SKFSAEEFINEVSTIGRIH--HV-NVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 72 ~ig~G~~g~V~~~~~~~~-~~vaiK~~~~--------~~~~~~~~~~e~~~l~~l~--h~-ni~~~~~~~~~~~~~~lv~ 139 (373)
.||.|....||++..++| +.++||.-.. ...+.++..-|.+.|+... .| .+++++. .++....+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence 479999999999997654 5799997421 1344566667888887663 34 4555553 3445567899
Q ss_pred eccCc
Q 048542 140 EYMPN 144 (373)
Q Consensus 140 e~~~~ 144 (373)
|+++.
T Consensus 80 EdL~~ 84 (370)
T TIGR01767 80 EDLSH 84 (370)
T ss_pred hhCcc
Confidence 98854
No 494
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.22 E-value=0.023 Score=51.99 Aligned_cols=107 Identities=15% Similarity=0.106 Sum_probs=70.1
Q ss_pred eCCeeEEEEeccCcCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCcCCCCeeeeCCCceEEee
Q 048542 131 EGSKRALVYEYMPNGSLDRHVFPKESRGQSLCWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPKVSD 210 (373)
Q Consensus 131 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~al~~LH~~~~~~ivH~dikp~Nil~~~~~~~kl~D 210 (373)
+....|++|++- |+++.. .....++++..++.+.+..+.-+..+ ...-|||+.-.|||++ +|++.|+|
T Consensus 297 e~~y~yl~~kdh-gt~is~--------ik~~~~~e~lsff~s~~sil~~lekk--f~fehrnlt~~niLId-~GnvtLID 364 (488)
T COG5072 297 ETLYLYLHFKDH-GTPISI--------IKADRSEEELSFFWSCISILDILEKK--FPFEHRNLTLDNILID-EGNVTLID 364 (488)
T ss_pred CceEEEEEEecC-Cceeee--------eecccHHHHHHHHHHHHHHHhhhhhc--CCcccccccccceeee-cCceEEEE
Confidence 344567777774 555532 23355778888998888877777764 5789999999999999 99999999
Q ss_pred ccCcccCCCCCCceeeecccCCCCcccccccccccCCcCcccchHHHHH
Q 048542 211 FGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGM 259 (373)
Q Consensus 211 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~s~~~DvwslG~ 259 (373)
|-+++... ......+ ...-.|-.+.|. -+.+-|||-+--
T Consensus 365 fklsRl~~-~q~~isy------~rldhp~lF~G~---dd~QFeIYrlMr 403 (488)
T COG5072 365 FKLSRLSY-SQGIISY------NRLDHPDLFNGV---DDYQFEIYRLMR 403 (488)
T ss_pred eeeeeccc-CCceeec------cccCchhhhcCc---cceeeeHHHHHH
Confidence 99998432 2211111 123345555543 244567776433
No 495
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.01 E-value=0.0044 Score=58.86 Aligned_cols=46 Identities=20% Similarity=0.286 Sum_probs=36.1
Q ss_pred HHHHHHHHHhcccCCCceeeEeeEeee-CCeeEEEEeccCcCCccccc
Q 048542 105 EEFINEVSTIGRIHHVNVVQLLGFCSE-GSKRALVYEYMPNGSLDRHV 151 (373)
Q Consensus 105 ~~~~~e~~~l~~l~h~ni~~~~~~~~~-~~~~~lv~e~~~~gsL~~~l 151 (373)
.++.-....++.+.|+|....+++-.. .....+|+|++ +.||.+.+
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~ 73 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDIL 73 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHH
Confidence 456677888999999999999887643 34578899998 66888777
No 496
>PRK06148 hypothetical protein; Provisional
Probab=95.95 E-value=0.13 Score=54.79 Aligned_cols=143 Identities=17% Similarity=0.200 Sum_probs=78.1
Q ss_pred cccCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhcccC-------CCceeeEe-e----Eeee-CC--ee
Q 048542 71 HKLGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRIH-------HVNVVQLL-G----FCSE-GS--KR 135 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-------h~ni~~~~-~----~~~~-~~--~~ 135 (373)
+.|+ |..-.+|+....+|..+++|+.+... .......|...+..|. -|.+++.. | .... +. +.
T Consensus 31 ~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~-~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~~ 108 (1013)
T PRK06148 31 TPLD-GERDLNFRLTTDDGADYILKIVNPSE-PRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPRL 108 (1013)
T ss_pred eecC-CcCCceEEEEeCCCCeEEEEEcCCcc-chhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceEE
Confidence 4464 45577898887778899999988643 3333344555555442 23333321 1 1111 12 45
Q ss_pred EEEEeccCcCCcccccc-----------------------CCCCCCCCCCHH-----------------HHHHHHHHHHH
Q 048542 136 ALVYEYMPNGSLDRHVF-----------------------PKESRGQSLCWE-----------------KLHEVALGTAR 175 (373)
Q Consensus 136 ~lv~e~~~~gsL~~~l~-----------------------~~~~~~~~l~~~-----------------~~~~i~~~i~~ 175 (373)
+-+++|++|..+.+... ........+.|. ....++.++.+
T Consensus 109 vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~~~ 188 (1013)
T PRK06148 109 LRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERFLA 188 (1013)
T ss_pred EEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHHHH
Confidence 67899999877654110 000001112221 11122223332
Q ss_pred HHH-----HHHcCCCCCeEecCcCCCCeeeeCCC--ceE-EeeccCccc
Q 048542 176 GIE-----YLHNGCDVCILHFDIKPHNILLDHNF--IPK-VSDFGLAKF 216 (373)
Q Consensus 176 al~-----~LH~~~~~~ivH~dikp~Nil~~~~~--~~k-l~Dfg~~~~ 216 (373)
... .+. ....+++|+|+.+.|||++.++ .+. |+|||-+..
T Consensus 189 ~~~~~v~p~l~-~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 189 RFERNVAPRLA-ALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred HHHHHHHHHHh-cCCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 221 121 2245899999999999999775 555 999998764
No 497
>PTZ00384 choline kinase; Provisional
Probab=95.93 E-value=0.093 Score=49.32 Aligned_cols=74 Identities=14% Similarity=0.195 Sum_probs=44.3
Q ss_pred cccCCCCcEEEEEEEEcCC--ce-----eEEEEeccCccCHHHHHHHHHHhcccCCCce-eeEeeEeeeCCeeEEEEecc
Q 048542 71 HKLGQGGFGSVYKGQLQTG--GL-----IAVKMLENSKFSAEEFINEVSTIGRIHHVNV-VQLLGFCSEGSKRALVYEYM 142 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~~--~~-----vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~lv~e~~ 142 (373)
+.|..|-...+|++...++ .. |.++.........-+-.+|..+++.+...++ +++++.+.. .++.||+
T Consensus 56 ~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~efI 131 (383)
T PTZ00384 56 KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD----FTIQEWV 131 (383)
T ss_pred EEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecCC----EEEEEEe
Confidence 4565688889999975532 22 4444322221111223578899998865444 445555542 5999999
Q ss_pred CcCCcc
Q 048542 143 PNGSLD 148 (373)
Q Consensus 143 ~~gsL~ 148 (373)
+|.+|.
T Consensus 132 eGr~l~ 137 (383)
T PTZ00384 132 EGNTMG 137 (383)
T ss_pred ccccCC
Confidence 887664
No 498
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.52 E-value=0.48 Score=40.83 Aligned_cols=73 Identities=19% Similarity=0.340 Sum_probs=46.9
Q ss_pred cCCCCcEEEEEEEEcCCceeEEEEeccCccCHHHHHHHHHHhccc---CCCceeeEeeEeeeCCeeEEEEeccCcCCcc
Q 048542 73 LGQGGFGSVYKGQLQTGGLIAVKMLENSKFSAEEFINEVSTIGRI---HHVNVVQLLGFCSEGSKRALVYEYMPNGSLD 148 (373)
Q Consensus 73 ig~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l---~h~ni~~~~~~~~~~~~~~lv~e~~~~gsL~ 148 (373)
+.-|.--..|...+ ...++.+|+-.... ...|..|+.-|..| +.-++.+++.+..+..+.|+|+||++-+.+.
T Consensus 24 v~gG~inea~~v~d-g~~~~FvK~n~~~~--~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 24 VSGGDINEAWRLRD-GTDPFFVKCNQREQ--LSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred cCCccccceeEeec-CCcceEEEecchhh--HHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 33343333444433 24578888644322 24456666655555 4466888888888999999999999876664
No 499
>PTZ00296 choline kinase; Provisional
Probab=95.09 E-value=0.2 Score=48.04 Aligned_cols=73 Identities=14% Similarity=0.164 Sum_probs=45.5
Q ss_pred cccCCCCcEEEEEEEEcC---------CceeEEEEeccCccCHHHHHHHHHHhcccCCCcee-eEeeEeeeCCeeEEEEe
Q 048542 71 HKLGQGGFGSVYKGQLQT---------GGLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVV-QLLGFCSEGSKRALVYE 140 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~---------~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~ni~-~~~~~~~~~~~~~lv~e 140 (373)
+.|..|-.-.+|++...+ ++.|.+|+........-+-..|..+++.+...+|- ++++.+. ...+.+
T Consensus 111 ~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi~P~l~~~f~----gg~I~e 186 (442)
T PTZ00296 111 NQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRIAPQLLNTFS----GGRIEE 186 (442)
T ss_pred EEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCCCCceEEEeC----CCEEEE
Confidence 456667777888887542 35788988765443322345688888877544433 3444432 346789
Q ss_pred ccCcCCc
Q 048542 141 YMPNGSL 147 (373)
Q Consensus 141 ~~~~gsL 147 (373)
|++|.+|
T Consensus 187 fi~g~~l 193 (442)
T PTZ00296 187 WLYGDPL 193 (442)
T ss_pred eeCCccC
Confidence 9987644
No 500
>PRK12396 5-methylribose kinase; Reviewed
Probab=94.92 E-value=0.076 Score=49.71 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=50.0
Q ss_pred cccCCCCcEEEEEEEEcC-CceeEEEEecc-------CccCHHHHHHHHHHhcccC--CC-ceeeEeeEeeeCCeeEEEE
Q 048542 71 HKLGQGGFGSVYKGQLQT-GGLIAVKMLEN-------SKFSAEEFINEVSTIGRIH--HV-NVVQLLGFCSEGSKRALVY 139 (373)
Q Consensus 71 ~~ig~G~~g~V~~~~~~~-~~~vaiK~~~~-------~~~~~~~~~~e~~~l~~l~--h~-ni~~~~~~~~~~~~~~lv~ 139 (373)
+.||.|.-..||++...+ ++.++||.-.. ...+.++..-|.+.|+... .| .+++++. .++....+||
T Consensus 35 ~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~--~D~e~~~~vM 112 (409)
T PRK12396 35 KEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL--FDSVMNCCVM 112 (409)
T ss_pred eEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE--ECcHHhhHHH
Confidence 678999999999999753 56789886421 2445577778888888763 34 4555653 3445567888
Q ss_pred eccCc
Q 048542 140 EYMPN 144 (373)
Q Consensus 140 e~~~~ 144 (373)
|+++.
T Consensus 113 EdL~~ 117 (409)
T PRK12396 113 EDLSD 117 (409)
T ss_pred HhCcc
Confidence 88854
Done!