Your job contains 1 sequence.
>048544
MAGQSDPHVSLFSPPEVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLA
AALKKRGKCTIRPPQWMSIENLTKVLEGEREDRGTFQAVPFHYIEISRLLFDHARDDIPD
IYMVRSLIEDIRDVRLHKIETNLEKFSATSAVK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048544
(153 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2101247 - symbol:PSF2 "AT3G12530" species:3702... 655 2.9e-64 1
UNIPROTKB|Q9Y248 - symbol:GINS2 "DNA replication complex ... 329 1.1e-31 2
MGI|MGI:1921019 - symbol:Gins2 "GINS complex subunit 2 (P... 337 1.4e-30 1
RGD|1311055 - symbol:Gins2 "GINS complex subunit 2 (Psf2 ... 337 1.4e-30 1
UNIPROTKB|E1BC42 - symbol:GINS2 "DNA replication complex ... 333 3.8e-30 1
UNIPROTKB|E2QU81 - symbol:GINS2 "DNA replication complex ... 331 6.2e-30 1
UNIPROTKB|F1S6I3 - symbol:GINS2 "DNA replication complex ... 324 3.4e-29 1
ZFIN|ZDB-GENE-050419-19 - symbol:gins2 "GINS complex subu... 323 4.4e-29 1
UNIPROTKB|Q7ZT46 - symbol:gins2 "DNA replication complex ... 316 2.4e-28 1
DICTYBASE|DDB_G0293564 - symbol:gins2 "GINS complex subun... 298 1.9e-26 1
WB|WBGene00009287 - symbol:F31C3.5 species:6239 "Caenorha... 267 3.8e-23 1
FB|FBgn0261976 - symbol:Psf2 "Psf2" species:7227 "Drosoph... 266 4.8e-23 1
ASPGD|ASPL0000004061 - symbol:AN5901 species:162425 "Emer... 178 6.9e-23 2
POMBASE|SPBC725.13c - symbol:psf2 "GINS complex subunit P... 255 7.0e-22 1
SGD|S000003608 - symbol:PSF2 "Subunit of the GINS complex... 170 2.3e-17 2
UNIPROTKB|G4NG20 - symbol:MGG_01917 "DNA replication comp... 137 1.6e-16 2
>TAIR|locus:2101247 [details] [associations]
symbol:PSF2 "AT3G12530" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006260 "DNA replication"
evidence=IEA] InterPro:IPR007257 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006260 EMBL:AP002047 EMBL:AC069474
EMBL:AP002055 InterPro:IPR021151 Pfam:PF05916 EMBL:BT010931
EMBL:BT020600 IPI:IPI00544971 RefSeq:NP_001030680.1
RefSeq:NP_187859.2 UniGene:At.39583 ProteinModelPortal:Q9C7A8
SMR:Q9C7A8 IntAct:Q9C7A8 STRING:Q9C7A8 PaxDb:Q9C7A8 PRIDE:Q9C7A8
DNASU:820432 EnsemblPlants:AT3G12530.1 GeneID:820432
KEGG:ath:AT3G12530 TAIR:At3g12530 eggNOG:COG5093
HOGENOM:HOG000246603 InParanoid:Q9C7A8 KO:K10733 OMA:VGPFRAG
PhylomeDB:Q9C7A8 ProtClustDB:CLSN2681358 Genevestigator:Q9C7A8
InterPro:IPR016906 PANTHER:PTHR12772 PIRSF:PIRSF028998
Uniprot:Q9C7A8
Length = 210
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 120/153 (78%), Positives = 135/153 (88%)
Query: 1 MAGQSDPHVSLFSPPEVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLA 60
MAGQ+DPH+SLFSP EVEFMAEDELVEIVPNM M+ LNFI GDFG F PQIP KVPLWLA
Sbjct: 1 MAGQTDPHISLFSPQEVEFMAEDELVEIVPNMNMEQLNFISGDFGRFIPQIPTKVPLWLA 60
Query: 61 AALKKRGKCTIRPPQWMSIENLTKVLEGEREDRGTFQAVPFHYIEISRLLFDHARDDIPD 120
ALK+RGKCT RPP WMS++NLT++LE ERE + TFQA+PF Y+EI+RLLFDHARDDIPD
Sbjct: 61 VALKRRGKCTFRPPGWMSVDNLTQILEAERESQSTFQALPFSYVEIARLLFDHARDDIPD 120
Query: 121 IYMVRSLIEDIRDVRLHKIETNLEKFSATSAVK 153
+YMVRSL+EDIRDVRLHK+ETNL F TSAVK
Sbjct: 121 MYMVRSLVEDIRDVRLHKLETNLGSFQGTSAVK 153
>UNIPROTKB|Q9Y248 [details] [associations]
symbol:GINS2 "DNA replication complex GINS protein PSF2"
species:9606 "Homo sapiens" [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand
elongation involved in DNA replication" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR007257
Reactome:REACT_115566 GO:GO:0005654 EMBL:CH471114 GO:GO:0000084
Reactome:REACT_383 GO:GO:0006271 InterPro:IPR021151 Pfam:PF05916
PDB:2E9X PDB:2EHO PDB:2Q9Q PDBsum:2E9X PDBsum:2EHO PDBsum:2Q9Q
eggNOG:COG5093 HOGENOM:HOG000246603 KO:K10733 OMA:VGPFRAG
InterPro:IPR016906 PANTHER:PTHR12772 PIRSF:PIRSF028998
EMBL:AF125098 EMBL:AF151880 EMBL:AF201939 EMBL:AK001275
EMBL:CR457186 EMBL:BC003186 EMBL:BC010164 EMBL:BC062444
IPI:IPI00007146 RefSeq:NP_057179.1 UniGene:Hs.433180
ProteinModelPortal:Q9Y248 SMR:Q9Y248 DIP:DIP-29332N IntAct:Q9Y248
MINT:MINT-1469655 STRING:Q9Y248 PhosphoSite:Q9Y248 DMDM:37999822
PRIDE:Q9Y248 DNASU:51659 Ensembl:ENST00000253462 GeneID:51659
KEGG:hsa:51659 UCSC:uc002fja.3 CTD:51659 GeneCards:GC16M085709
HGNC:HGNC:24575 MIM:610609 neXtProt:NX_Q9Y248 PharmGKB:PA145008313
HOVERGEN:HBG044983 InParanoid:Q9Y248 OrthoDB:EOG4WSWBN
PhylomeDB:Q9Y248 ChiTaRS:GINS2 EvolutionaryTrace:Q9Y248
GenomeRNAi:51659 NextBio:55634 Bgee:Q9Y248 CleanEx:HS_GINS2
Genevestigator:Q9Y248 GermOnline:ENSG00000131153 Uniprot:Q9Y248
Length = 185
Score = 329 (120.9 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 61/132 (46%), Positives = 92/132 (69%)
Query: 16 EVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLAAALKKRGKCTIRPPQ 75
EVEF+AE ELV I+PN +D + I GD GPF P +PV+VPLWLA LK+R KC + PP+
Sbjct: 5 EVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPE 64
Query: 76 WMSIENLTKVLEGEREDRGTFQAVPF-HYIEISRLLFDHARDDIPDIYMVRSLIEDIRDV 134
WM +E L K+ + ER++ TF +P +Y+E+++LL +HA D+IP +R+L++D+ D
Sbjct: 65 WMDVEKLEKMRDHERKEE-TFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDMWDT 123
Query: 135 RLHKIETNLEKF 146
R+ K+ + + F
Sbjct: 124 RIAKLRVSADSF 135
Score = 34 (17.0 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 136 LHKIETNLEKFSATSA 151
++K+ TNL+ +T +
Sbjct: 167 MYKLRTNLQPLESTQS 182
>MGI|MGI:1921019 [details] [associations]
symbol:Gins2 "GINS complex subunit 2 (Psf2 homolog)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR007257 MGI:MGI:1921019 GO:GO:0005634 GO:GO:0006260
InterPro:IPR021151 Pfam:PF05916 eggNOG:COG5093 HOGENOM:HOG000246603
KO:K10733 OMA:VGPFRAG InterPro:IPR016906 PANTHER:PTHR12772
PIRSF:PIRSF028998 GeneTree:ENSGT00390000007838 CTD:51659
HOVERGEN:HBG044983 OrthoDB:EOG4WSWBN EMBL:AK014776 EMBL:AK028375
EMBL:AK030758 EMBL:BC082565 IPI:IPI00108254 RefSeq:NP_849187.1
UniGene:Mm.275910 ProteinModelPortal:Q9D600 SMR:Q9D600
STRING:Q9D600 PhosphoSite:Q9D600 PaxDb:Q9D600 PRIDE:Q9D600
Ensembl:ENSMUST00000034278 GeneID:272551 KEGG:mmu:272551
UCSC:uc009nrd.1 InParanoid:Q9D600 NextBio:393602 Bgee:Q9D600
CleanEx:MM_GINS2 Genevestigator:Q9D600
GermOnline:ENSMUSG00000031821 Uniprot:Q9D600
Length = 185
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 64/132 (48%), Positives = 91/132 (68%)
Query: 16 EVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLAAALKKRGKCTIRPPQ 75
EVEF+AE ELV I+PN +D + I GD GPF P +PV VPLWLA LK+R KC + PP+
Sbjct: 5 EVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVDVPLWLAINLKQRQKCRLLPPE 64
Query: 76 WMSIENLTKVLEGEREDRGTFQAVPF-HYIEISRLLFDHARDDIPDIYMVRSLIEDIRDV 134
WM +E L ++ + ER++ TF VP HY+EI++LL +HA D+IP +R+LI+D+ D
Sbjct: 65 WMDVEKLEQMRDEERKEE-TFTPVPSPHYMEITKLLLNHASDNIPKADTIRTLIKDLWDT 123
Query: 135 RLHKIETNLEKF 146
R+ K+ + + F
Sbjct: 124 RMAKLRVSADSF 135
>RGD|1311055 [details] [associations]
symbol:Gins2 "GINS complex subunit 2 (Psf2 homolog)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
InterPro:IPR007257 RGD:1311055 GO:GO:0005634 GO:GO:0006260
EMBL:CH473972 InterPro:IPR021151 Pfam:PF05916 KO:K10733 OMA:VGPFRAG
InterPro:IPR016906 PANTHER:PTHR12772 PIRSF:PIRSF028998
GeneTree:ENSGT00390000007838 CTD:51659 OrthoDB:EOG4WSWBN
IPI:IPI00189438 RefSeq:NP_001099660.1 UniGene:Rn.232068
Ensembl:ENSRNOT00000023709 GeneID:292058 KEGG:rno:292058
UCSC:RGD:1311055 NextBio:633673 Uniprot:D3ZSY6
Length = 185
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 64/132 (48%), Positives = 91/132 (68%)
Query: 16 EVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLAAALKKRGKCTIRPPQ 75
EVEF+AE ELV I+PN +D + I GD GPF P +PV VPLWLA LK+R KC + PP+
Sbjct: 5 EVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVDVPLWLAINLKQRQKCRLLPPE 64
Query: 76 WMSIENLTKVLEGEREDRGTFQAVPF-HYIEISRLLFDHARDDIPDIYMVRSLIEDIRDV 134
WM +E L ++ + ER++ TF VP HY+EI++LL +HA D+IP +R+LI+D+ D
Sbjct: 65 WMDVEKLEQMRDEERKEE-TFTPVPSPHYMEITKLLLNHASDNIPKADTIRTLIKDLWDT 123
Query: 135 RLHKIETNLEKF 146
R+ K+ + + F
Sbjct: 124 RMAKLRVSADSF 135
>UNIPROTKB|E1BC42 [details] [associations]
symbol:GINS2 "DNA replication complex GINS protein PSF2"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR007257
GO:GO:0005634 GO:GO:0006260 InterPro:IPR021151 Pfam:PF05916
KO:K10733 OMA:VGPFRAG InterPro:IPR016906 PANTHER:PTHR12772
PIRSF:PIRSF028998 GeneTree:ENSGT00390000007838 CTD:51659
EMBL:DAAA02046208 EMBL:DAAA02046209 EMBL:DAAA02046210
IPI:IPI00692243 RefSeq:XP_002694797.1 Ensembl:ENSBTAT00000061540
GeneID:100299171 KEGG:bta:100299171 Uniprot:E1BC42
Length = 185
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 62/132 (46%), Positives = 91/132 (68%)
Query: 16 EVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLAAALKKRGKCTIRPPQ 75
EVEF+AE ELV I+PN +D + I GD GPF P +PV+VPLWLA LK+R KC + PP+
Sbjct: 5 EVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVQVPLWLAVNLKQRQKCRLLPPE 64
Query: 76 WMSIENLTKVLEGEREDRGTFQAVPF-HYIEISRLLFDHARDDIPDIYMVRSLIEDIRDV 134
WM +E L K+ + ER++ TF +P +Y+E+++LL +HA D+IP +R+LI+D+ D
Sbjct: 65 WMDVEKLEKIRDHERKEE-TFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLIKDVWDT 123
Query: 135 RLHKIETNLEKF 146
R+ K + + F
Sbjct: 124 RIAKFRVSADSF 135
>UNIPROTKB|E2QU81 [details] [associations]
symbol:GINS2 "DNA replication complex GINS protein PSF2"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
InterPro:IPR007257 GO:GO:0005634 GO:GO:0006260 InterPro:IPR021151
Pfam:PF05916 KO:K10733 OMA:VGPFRAG InterPro:IPR016906
PANTHER:PTHR12772 PIRSF:PIRSF028998 GeneTree:ENSGT00390000007838
CTD:51659 EMBL:AAEX03004003 EMBL:AAEX03004004 EMBL:AAEX03004005
RefSeq:XP_851786.1 Ensembl:ENSCAFT00000031699 GeneID:609436
KEGG:cfa:609436 NextBio:20895034 Uniprot:E2QU81
Length = 185
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 61/132 (46%), Positives = 92/132 (69%)
Query: 16 EVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLAAALKKRGKCTIRPPQ 75
EVEF+AE ELV I+PN +D + I GD GPF P +PV+VPLWLA LK+R KC + PP+
Sbjct: 5 EVEFLAEKELVTIIPNFSVDKMYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLIPPE 64
Query: 76 WMSIENLTKVLEGEREDRGTFQAVPF-HYIEISRLLFDHARDDIPDIYMVRSLIEDIRDV 134
WM +E L K+ + ER++ TF +P +Y+E+++LL +HA D+IP +R+L++D+ D
Sbjct: 65 WMDVEKLEKIRDHERKEE-TFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDVWDT 123
Query: 135 RLHKIETNLEKF 146
R+ K+ + + F
Sbjct: 124 RIAKLRVSADSF 135
>UNIPROTKB|F1S6I3 [details] [associations]
symbol:GINS2 "DNA replication complex GINS protein PSF2"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR007257
GO:GO:0005634 GO:GO:0006260 InterPro:IPR021151 Pfam:PF05916
KO:K10733 OMA:VGPFRAG InterPro:IPR016906 PANTHER:PTHR12772
PIRSF:PIRSF028998 GeneTree:ENSGT00390000007838 EMBL:FP102522
RefSeq:XP_003126865.1 UniGene:Ssc.70142 Ensembl:ENSSSCT00000002954
GeneID:100512784 KEGG:ssc:100512784 Uniprot:F1S6I3
Length = 185
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 62/132 (46%), Positives = 89/132 (67%)
Query: 16 EVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLAAALKKRGKCTIRPPQ 75
EVEF+AE ELV I+PN +D + I GD GPF P +PV+VPLWLA LK+R KC + P+
Sbjct: 5 EVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVQVPLWLAINLKQRQKCRLLAPE 64
Query: 76 WMSIENLTKVLEGEREDRGTFQAVPF-HYIEISRLLFDHARDDIPDIYMVRSLIEDIRDV 134
WM +E L K+ + ER++ TF P HY E+++LL +HA D+IP +R+LI+D+ D
Sbjct: 65 WMDVEKLEKMRDHERKE-DTFTPAPNPHYTELTKLLLNHASDNIPKADEIRTLIKDVWDT 123
Query: 135 RLHKIETNLEKF 146
R+ K+ + + F
Sbjct: 124 RVAKLRVSADSF 135
>ZFIN|ZDB-GENE-050419-19 [details] [associations]
symbol:gins2 "GINS complex subunit 2" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR007257
ZFIN:ZDB-GENE-050419-19 GO:GO:0005524 GO:GO:0005634 GO:GO:0006260
EMBL:BX548023 InterPro:IPR021151 Pfam:PF05916 eggNOG:COG5093
HOGENOM:HOG000246603 KO:K10733 OMA:VGPFRAG InterPro:IPR016906
PANTHER:PTHR12772 PIRSF:PIRSF028998 GeneTree:ENSGT00390000007838
CTD:51659 HOVERGEN:HBG044983 OrthoDB:EOG4WSWBN EMBL:BC095711
IPI:IPI00495505 RefSeq:NP_001019610.1 UniGene:Dr.79799 SMR:Q4VBJ6
STRING:Q4VBJ6 Ensembl:ENSDART00000033746 GeneID:554146
KEGG:dre:554146 InParanoid:Q4VBJ6 NextBio:20880705 Uniprot:Q4VBJ6
Length = 182
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 61/134 (45%), Positives = 91/134 (67%)
Query: 14 PPEVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLAAALKKRGKCTIRP 73
P EVEF+AE E+V+I+PN +D + I GD GPF P +PV+VP+WLA LK+R KC I P
Sbjct: 3 PAEVEFLAEKEMVKIIPNFSLDKIYLIGGDLGPFNPGLPVEVPVWLALNLKQRQKCRIVP 62
Query: 74 PQWMSIENLTKVLEGEREDRGTFQAVPF-HYIEISRLLFDHARDDIPDIYMVRSLIEDIR 132
P+WM + L + E ER+ TF +P +Y+E+++LL +HA D+IP +R+L++DI
Sbjct: 63 PEWMDTDKLEDIREQERK-LDTFTPIPNPYYMELTKLLLNHAADNIPKADEIRTLVKDIW 121
Query: 133 DVRLHKIETNLEKF 146
D R+ K+ + + F
Sbjct: 122 DTRMAKLRLSADSF 135
>UNIPROTKB|Q7ZT46 [details] [associations]
symbol:gins2 "DNA replication complex GINS protein PSF2"
species:8355 "Xenopus laevis" [GO:0000811 "GINS complex"
evidence=IPI] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0006271 "DNA strand elongation involved in DNA replication"
evidence=IDA] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IDA] InterPro:IPR007257
GO:GO:0003682 GO:GO:0006271 GO:GO:0032784 InterPro:IPR021151
Pfam:PF05916 GO:GO:0000811 KO:K10733 InterPro:IPR016906
PANTHER:PTHR12772 PIRSF:PIRSF028998 HOVERGEN:HBG044983
EMBL:AB097169 EMBL:BC073044 RefSeq:NP_001085627.1 UniGene:Xl.3786
ProteinModelPortal:Q7ZT46 SMR:Q7ZT46 GeneID:444053 KEGG:xla:444053
Xenbase:XB-GENE-6256252 Uniprot:Q7ZT46
Length = 185
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 59/132 (44%), Positives = 88/132 (66%)
Query: 16 EVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLAAALKKRGKCTIRPPQ 75
EVEF+AE E V ++PN +D + I GD GPF P +PV+VPLWLA LK+R KC I PP+
Sbjct: 5 EVEFLAEKEQVTVIPNFSLDKVYLIGGDLGPFNPSLPVEVPLWLAINLKQRQKCRIVPPE 64
Query: 76 WMSIENLTKVLEGEREDRGTFQAVPF-HYIEISRLLFDHARDDIPDIYMVRSLIEDIRDV 134
WM +E L + + ER + TF +P +Y+E+++LL +HA D+IP +R+L++D D
Sbjct: 65 WMDVEKLEAIRDQERREE-TFTPMPSPYYMELTKLLLNHAADNIPKADEIRTLVKDTWDT 123
Query: 135 RLHKIETNLEKF 146
R+ K+ + + F
Sbjct: 124 RIAKLRLSADSF 135
>DICTYBASE|DDB_G0293564 [details] [associations]
symbol:gins2 "GINS complex subunit 2" species:44689
"Dictyostelium discoideum" [GO:0006260 "DNA replication"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0043138
"3'-5' DNA helicase activity" evidence=ISS] [GO:0000811 "GINS
complex" evidence=ISS] InterPro:IPR007257 dictyBase:DDB_G0293564
GenomeReviews:CM000155_GR GO:GO:0006260 EMBL:AAFI02000218
InterPro:IPR021151 Pfam:PF05916 GO:GO:0000811 eggNOG:COG5093
KO:K10733 PANTHER:PTHR12772 RefSeq:XP_629010.1
ProteinModelPortal:Q54BL9 STRING:Q54BL9 EnsemblProtists:DDB0266354
GeneID:8629294 KEGG:ddi:DDB_G0293564 OMA:VEIVPNI
ProtClustDB:CLSZ2429234 Uniprot:Q54BL9
Length = 223
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 56/131 (42%), Positives = 83/131 (63%)
Query: 14 PPEVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLAAALKKRGKCTIRP 73
P ++EF+AED + +VPN +M+ L F+ G++GPF P P+++PLWLA +LKK+ KCTI P
Sbjct: 8 PSQIEFLAEDTTITVVPNFKMESLIFLSGEYGPFVPSFPIEIPLWLAISLKKKKKCTITP 67
Query: 74 PQWMSIENLTKVLEGEREDRGTFQAVPFHYIEISRLLFDHARDDIPDIYMVRSLIEDIRD 133
P WM+ L + E + + F +P ++ EIS LL + DDI DI +R L DI
Sbjct: 68 PDWMTYNKLKAKFQEENKIKDGFIELPENFDEISSLLLANCPDDIKDINKIRILKGDILS 127
Query: 134 VRLHKIETNLE 144
R K+E +L+
Sbjct: 128 RREKKLEESLK 138
>WB|WBGene00009287 [details] [associations]
symbol:F31C3.5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR007257 GO:GO:0005634 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0002119 GO:GO:0006260
GO:GO:0010171 GO:GO:0040011 GO:GO:0040035 EMBL:Z92784 GO:GO:0001703
InterPro:IPR021151 Pfam:PF05916 eggNOG:COG5093 HOGENOM:HOG000246603
KO:K10733 OMA:VGPFRAG InterPro:IPR016906 PANTHER:PTHR12772
PIRSF:PIRSF028998 PIR:T21590 RefSeq:NP_493627.1 UniGene:Cel.18820
ProteinModelPortal:O62193 SMR:O62193 IntAct:O62193 STRING:O62193
PaxDb:O62193 EnsemblMetazoa:F31C3.5 GeneID:185146
KEGG:cel:CELE_F31C3.5 UCSC:F31C3.5 CTD:185146 WormBase:F31C3.5
GeneTree:ENSGT00390000007838 InParanoid:O62193 NextBio:927198
Uniprot:O62193
Length = 180
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 49/130 (37%), Positives = 84/130 (64%)
Query: 18 EFMAEDELVEIVPNMRMD-PLNFICGDFGPFYPQIPVKVPLWLAAALKKRGKCTIRPPQW 76
EF+A + L+E++P++ D P++ I GD GPF +P ++P+W A +K++ C + PQW
Sbjct: 7 EFIAGNSLIEVIPSISDDRPIHLISGDIGPFEAGVPCRIPVWTAILMKRKHNCKVVAPQW 66
Query: 77 MSIENLTKVLEGEREDRGTFQAVPFHYIEISRLLFDHARDDIPDIYMVRSLIEDIRDVRL 136
M ++ L K+L E E +G + +P H+ EIS +L AR+DI ++ V+SL++DI D R
Sbjct: 67 MDVDELKKILTSETESQGLAK-LPDHFFEISHMLVRDAREDIFEVEAVKSLVQDIYDRRD 125
Query: 137 HKIETNLEKF 146
K+ ++ +F
Sbjct: 126 AKLRSSAIEF 135
>FB|FBgn0261976 [details] [associations]
symbol:Psf2 "Psf2" species:7227 "Drosophila melanogaster"
[GO:0006271 "DNA strand elongation involved in DNA replication"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000811 "GINS
complex" evidence=IDA] [GO:0043138 "3'-5' DNA helicase activity"
evidence=IDA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] [GO:0046331 "lateral inhibition" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP]
InterPro:IPR007257 EMBL:AE014134 GO:GO:0022008 GO:GO:0046331
GO:GO:0045750 GO:GO:0006271 GO:GO:0032784 InterPro:IPR021151
Pfam:PF05916 GO:GO:0000811 eggNOG:COG5093 KO:K10733
InterPro:IPR016906 PANTHER:PTHR12772 PIRSF:PIRSF028998
GeneTree:ENSGT00390000007838 EMBL:AY071234 RefSeq:NP_608826.3
UniGene:Dm.23522 ProteinModelPortal:Q9VQY9 SMR:Q9VQY9 IntAct:Q9VQY9
MINT:MINT-806440 STRING:Q9VQY9 PaxDb:Q9VQY9 PRIDE:Q9VQY9
EnsemblMetazoa:FBtr0331449 EnsemblMetazoa:FBtr0331450 GeneID:33641
KEGG:dme:Dmel_CG18013 UCSC:CG18013-RA CTD:33641 FlyBase:FBgn0261976
InParanoid:Q9VQY9 OrthoDB:EOG4KH1B2 GenomeRNAi:33641 NextBio:784567
Bgee:Q9VQY9 GermOnline:CG18013 Uniprot:Q9VQY9
Length = 203
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 51/134 (38%), Positives = 84/134 (62%)
Query: 14 PPEVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLAAALKKRGKCTIRP 73
P +EF+ E ++ I+PN +PL+ I G GPF PV VPLW+A L+K+ KC I P
Sbjct: 3 PSIIEFIGEKCMISIIPNFSNEPLHLIYGPVGPFRAGFPVFVPLWMATHLRKQQKCRIVP 62
Query: 74 PQWMSIENLTKVLEGEREDRGTFQAVPF-HYIEISRLLFDHARDDIPDIYMVRSLIEDIR 132
P+WM ++ L ++ E E+ + F +P HY+ +++L+ A DD+P +R++I+DI
Sbjct: 63 PEWMDMDILEEIKEEEKRSK-FFTKMPCEHYMVVAQLVMSTAPDDVPRCEELRTVIKDIF 121
Query: 133 DVRLHKIETNLEKF 146
D+R K+ T+++ F
Sbjct: 122 DIRESKLRTSIDAF 135
>ASPGD|ASPL0000004061 [details] [associations]
symbol:AN5901 species:162425 "Emericella nidulans"
[GO:0031298 "replication fork protection complex" evidence=IEA]
[GO:0000811 "GINS complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000727 "double-strand break
repair via break-induced replication" evidence=IEA] [GO:0006261
"DNA-dependent DNA replication" evidence=IEA] InterPro:IPR007257
GO:GO:0005634 GO:GO:0007059 GO:GO:0006260 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR021151 Pfam:PF05916 KO:K10733
InterPro:IPR016906 PANTHER:PTHR12772 PIRSF:PIRSF028998
RefSeq:XP_663505.1 ProteinModelPortal:Q5B0M9 GeneID:2870816
KEGG:ani:AN5901.2 eggNOG:NOG137511 HOGENOM:HOG000163760
OrthoDB:EOG479JH4 Uniprot:Q5B0M9
Length = 272
Score = 178 (67.7 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 13 SPPEVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLAAALKKRGKCTIR 72
+PPE+ F+AE ELV IVP R++ L + G P P VPLWLA LK++ + I
Sbjct: 10 TPPEISFLAEMELVTIVPRQRLEGLELLGGPVAPLIPPRRTNVPLWLALLLKRQRRANIL 69
Query: 73 PPQWMSIENLTKVLEGEREDR 93
PP W+ E+L+ +L+ E D+
Sbjct: 70 PPPWLHPESLSLILDIETRDQ 90
Score = 101 (40.6 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 99 VPFHYIEISRLLFDHARDDIPDIYMVRSLIEDIRDVRLHKIETNLE 144
+PFH++E+ +L D A DD+ D R L++++R+VR KI + +E
Sbjct: 156 LPFHWLEVGTMLLDAAADDLVDPDQTRRLLKELREVRSAKIRSGVE 201
>POMBASE|SPBC725.13c [details] [associations]
symbol:psf2 "GINS complex subunit Psf2" species:4896
"Schizosaccharomyces pombe" [GO:0000811 "GINS complex"
evidence=TAS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006261 "DNA-dependent DNA replication"
evidence=IMP] [GO:0006270 "DNA replication initiation"
evidence=TAS] [GO:0031261 "DNA replication preinitiation complex"
evidence=IC] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0043596 "nuclear replication fork" evidence=IC]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR007257 PomBase:SPBC725.13c GO:GO:0005829 GO:GO:0034613
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006270 GO:GO:0043596
GO:GO:0045132 InterPro:IPR021151 Pfam:PF05916 GO:GO:0000811
eggNOG:COG5093 HOGENOM:HOG000246603 KO:K10733 OMA:VGPFRAG
InterPro:IPR016906 PANTHER:PTHR12772 PIRSF:PIRSF028998 PIR:T40665
RefSeq:NP_595493.1 ProteinModelPortal:O94329 STRING:O94329
EnsemblFungi:SPBC725.13c.1 GeneID:2541194 KEGG:spo:SPBC725.13c
OrthoDB:EOG4R274H NextBio:20802306 Uniprot:O94329
Length = 183
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 53/133 (39%), Positives = 75/133 (56%)
Query: 12 FSPPEVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLAAALKKRGKCTI 71
FSP E+EF+A +E + IVP+ MD L + P +VPLWLA LKK+ I
Sbjct: 11 FSPEEMEFLAGNEYINIVPSETMDQLPLVSATIPIMKPPKKCRVPLWLALELKKQNLARI 70
Query: 72 RPPQWMSIENLTKVLEGEREDRGTFQAVPFHYIEISRLLFDHARDDIPDIYMVRSLIEDI 131
PP+WM I L + + E E+ TF +PF ++E + LL + DDI D+ +R ++ DI
Sbjct: 71 VPPEWMEIGKLENIRDDELENE-TFSELPFRWLETAHLLLNFCADDIEDVEDIRRILLDI 129
Query: 132 RDVRLHKIETNLE 144
R+ R K T LE
Sbjct: 130 REARQSKARTGLE 142
>SGD|S000003608 [details] [associations]
symbol:PSF2 "Subunit of the GINS complex" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IGI;IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0000811 "GINS
complex" evidence=IPI] [GO:0031298 "replication fork protection
complex" evidence=IDA] [GO:0000727 "double-strand break repair via
break-induced replication" evidence=IMP] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0031261 "DNA replication preinitiation complex"
evidence=IPI] InterPro:IPR007257 SGD:S000003608 EMBL:BK006943
GO:GO:0006261 EMBL:X88851 GO:GO:0031298 GO:GO:0000727 EMBL:Z34288
InterPro:IPR021151 Pfam:PF05916 GO:GO:0000811 eggNOG:COG5093
HOGENOM:HOG000246603 KO:K10733 InterPro:IPR016906 PANTHER:PTHR12772
PIRSF:PIRSF028998 GeneTree:ENSGT00390000007838 OrthoDB:EOG4R274H
EMBL:Z49347 EMBL:AY558248 PIR:S50799 RefSeq:NP_012463.1
ProteinModelPortal:P40359 SMR:P40359 DIP:DIP-3858N IntAct:P40359
MINT:MINT-550028 STRING:P40359 EnsemblFungi:YJL072C GeneID:853373
KEGG:sce:YJL072C CYGD:YJL072c OMA:MEINEMR NextBio:973816
Genevestigator:P40359 GermOnline:YJL072C Uniprot:P40359
Length = 213
Score = 170 (64.9 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 31/92 (33%), Positives = 61/92 (66%)
Query: 54 KVPLWLAAALKKRGKCTIRPPQWMSIENLTKVLEGEREDRGTFQAVPFHYIEISRLLFDH 113
+V LW+A LK++ KC+I PQW++ + L + ++ E+ F +P++++ ++R+LF+
Sbjct: 70 EVVLWIALLLKQQSKCSIVAPQWLTTKELDRKIQYEKTHPDRFSELPWNWLVLARILFNK 129
Query: 114 ARDDIPD-IYMVRSLIEDIRDVRLHKIETNLE 144
A+DD D I+ +R I+D+R++R K+ L+
Sbjct: 130 AKDDFHDPIHELRGKIQDLREIRQIKVLKGLK 161
Score = 56 (24.8 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 12 FSPPEVEFMAEDELVEIVPNM 32
FSP E++F+ E+E ++I P +
Sbjct: 11 FSPEEIQFIVENEPIKIFPRI 31
>UNIPROTKB|G4NG20 [details] [associations]
symbol:MGG_01917 "DNA replication complex GINS protein
PSF2" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007257 GO:GO:0005634
GO:GO:0006260 EMBL:CM001236 InterPro:IPR021151 Pfam:PF05916
KO:K10733 InterPro:IPR016906 PANTHER:PTHR12772 PIRSF:PIRSF028998
RefSeq:XP_003719344.1 ProteinModelPortal:G4NG20
EnsemblFungi:MGG_01917T0 GeneID:2681132 KEGG:mgr:MGG_01917
Uniprot:G4NG20
Length = 247
Score = 137 (53.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 13 SPPEVEFMAEDELVEIVPNMRMDPLNFICGDFGPFYPQIPVKVPLWLAAALKKRGKCTIR 72
+P E+ F+ E+ELV IVP R++ + + G P +PLWLA LKK+ + I
Sbjct: 10 TPSEIAFLCENELVTIVPRQRLESIPLLQGPTPTLRPPHRATLPLWLALLLKKQRRANII 69
Query: 73 PPQWMSIENLTKVLEGERE-DRGTFQAVP 100
P WM +L ++++ E D F P
Sbjct: 70 APPWMHPASLQQIIQHETHTDPVAFSPPP 98
Score = 86 (35.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 99 VPFHYIEISRLLFDHARDDIP-DIYMVRSLIEDIRDVRLHKIETN 142
+P+H++E++ +L HA DD+P VR LI D+ +VR K+ +
Sbjct: 138 LPYHWLEMAEILLAHAPDDMPASAGEVRGLIRDLVEVRAAKMRAS 182
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 153 153 0.00081 105 3 11 22 0.45 31
30 0.41 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 579 (62 KB)
Total size of DFA: 147 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.13u 0.20s 15.33t Elapsed: 00:00:01
Total cpu time: 15.13u 0.20s 15.33t Elapsed: 00:00:01
Start: Sat May 11 06:41:09 2013 End: Sat May 11 06:41:10 2013