BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048546
(125 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296082049|emb|CBI21054.3| unnamed protein product [Vitis vinifera]
Length = 251
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/125 (63%), Positives = 95/125 (76%), Gaps = 1/125 (0%)
Query: 1 MPRIAMEEFSPRISVDSPRHSGALSLMIGGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDI 60
MP I +++ P++S + L L+I G SRK Y KLP+QP+KLSV KLDGSCF I
Sbjct: 1 MPTIDLDDIVPKVSRSAALRFSPL-LVINGLSRKASFYWKLPQQPIKLSVLKLDGSCFQI 59
Query: 61 EVMKTATIAELRQAVEAAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGI 120
EV KT+T+AEL+QAVE AFSH+PK GPGKISW HVWGHFCLCYN QKL+ E + IK YGI
Sbjct: 60 EVTKTSTVAELKQAVEDAFSHLPKKGPGKISWLHVWGHFCLCYNDQKLVTETEYIKNYGI 119
Query: 121 RDGDQ 125
+DGDQ
Sbjct: 120 KDGDQ 124
>gi|255548890|ref|XP_002515501.1| hypothetical protein RCOM_0923760 [Ricinus communis]
gi|223545445|gb|EEF46950.1| hypothetical protein RCOM_0923760 [Ricinus communis]
Length = 571
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 100/129 (77%), Gaps = 6/129 (4%)
Query: 3 RIAMEEFSPRISVDSPRHSGAL-----SLMIGGFSRKNFSYNK-LPEQPLKLSVRKLDGS 56
RI M+++ P++SV R S +L +++ GG+SR++ LPE+PLKLS+ KLDGS
Sbjct: 7 RIDMDDYLPKVSVGHHRRSSSLPLSPFTIVDGGYSRRSSVSYSMLPEEPLKLSILKLDGS 66
Query: 57 CFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIK 116
CFD+EVMK+AT+AELRQA+EA FSHMP+ GPGKISWPHVW HFCL + GQKL+ E D I
Sbjct: 67 CFDVEVMKSATVAELRQAIEAVFSHMPRKGPGKISWPHVWSHFCLMFEGQKLVRETDYIG 126
Query: 117 YYGIRDGDQ 125
YYGIRDGDQ
Sbjct: 127 YYGIRDGDQ 135
>gi|147846512|emb|CAN81657.1| hypothetical protein VITISV_042595 [Vitis vinifera]
Length = 283
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 95/136 (69%), Gaps = 12/136 (8%)
Query: 1 MPRIAMEEFSPRISVDSPRHSGALSLMIGGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDI 60
MP I +++ P++S + L L+I G SRK Y KLP+QP+KLSV KLDGSCF I
Sbjct: 1 MPTIDLDDIVPKVSRSAALRFSPL-LVINGLSRKASFYWKLPQQPIKLSVLKLDGSCFQI 59
Query: 61 EVMKTATIAELRQAVEAAFSHMPKTGPGKISW-----------PHVWGHFCLCYNGQKLI 109
EV KT+T+AEL+QAVE AFSH+PK GPGKISW HVWGHFCLCYN QKL+
Sbjct: 60 EVTKTSTVAELKQAVEDAFSHLPKKGPGKISWYFHCRYSHILGLHVWGHFCLCYNDQKLV 119
Query: 110 CENDNIKYYGIRDGDQ 125
E + IK YGI+DGDQ
Sbjct: 120 TETEYIKNYGIKDGDQ 135
>gi|356563874|ref|XP_003550182.1| PREDICTED: uncharacterized protein LOC100820296 [Glycine max]
Length = 275
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 85/102 (83%)
Query: 24 LSLMIGGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMP 83
L+++ G F+RK+F Y++LP QPL+L+V KLDGSCF I+V KTAT+AEL+ AVEA FSH+P
Sbjct: 30 LAIIDGIFARKSFFYDRLPSQPLRLTVLKLDGSCFHIQVSKTATVAELKDAVEAVFSHVP 89
Query: 84 KTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
GP KISW HVWG FCLCY+GQKL+ E DN++ YGI+DGDQ
Sbjct: 90 HKGPAKISWAHVWGQFCLCYDGQKLVTEKDNLRNYGIKDGDQ 131
>gi|224089270|ref|XP_002308669.1| predicted protein [Populus trichocarpa]
gi|222854645|gb|EEE92192.1| predicted protein [Populus trichocarpa]
Length = 292
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 79/90 (87%)
Query: 36 FSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKISWPHV 95
+SYNKLPE+PL+LSV KLD S F+IEVMK+AT+ ELRQAVEAAFS+MP+ GPGKISWPH+
Sbjct: 69 YSYNKLPEEPLRLSVLKLDASSFEIEVMKSATVEELRQAVEAAFSYMPQEGPGKISWPHL 128
Query: 96 WGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
WGHFCLCY QKL+ E D IK YGI+DGDQ
Sbjct: 129 WGHFCLCYGDQKLLMETDYIKNYGIKDGDQ 158
>gi|388519459|gb|AFK47791.1| unknown [Lotus japonicus]
Length = 269
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 66/103 (64%), Positives = 83/103 (80%)
Query: 23 ALSLMIGGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHM 82
+S++ F++K+F Y KLP QP +LSV KLDGS FDI+V KTA+IAEL+ AVEA FSHM
Sbjct: 25 TISIIDTIFAKKSFLYGKLPSQPFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHM 84
Query: 83 PKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
P+ GP KISWPHVWG FCLCY+GQKL+ E D ++ YGI+DGD+
Sbjct: 85 PEKGPAKISWPHVWGQFCLCYDGQKLVTEEDYLRNYGIKDGDE 127
>gi|388521043|gb|AFK48583.1| unknown [Lotus japonicus]
Length = 220
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 83/104 (79%)
Query: 22 GALSLMIGGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSH 81
+S++ F++K+F Y KLP QP +LSV KLDGS FDI+V KTA+IAEL+ AVEA FSH
Sbjct: 24 STISIIDTIFAKKSFLYGKLPSQPFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSH 83
Query: 82 MPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
MP+ GP KISWPHVWG FCLCY+GQKL+ E D ++ YGI+DGD+
Sbjct: 84 MPEKGPAKISWPHVWGQFCLCYDGQKLVTEEDYLRNYGIKDGDE 127
>gi|449520183|ref|XP_004167113.1| PREDICTED: uncharacterized LOC101219460 [Cucumis sativus]
Length = 277
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 88/124 (70%), Gaps = 6/124 (4%)
Query: 8 EFSPRISVDSP-RHSGALSL-----MIGGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDIE 61
+F P S +P +H + SL MI G SRKN Y +LP QPL LSV KLDGS FDI+
Sbjct: 13 DFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSSFDIQ 72
Query: 62 VMKTATIAELRQAVEAAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIR 121
V ++AT+AEL+ AVE FSHMP+ GPGKISW HVW HFCLCY GQKL+ + D I +GI+
Sbjct: 73 VRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLVDDADYIASFGIK 132
Query: 122 DGDQ 125
DGDQ
Sbjct: 133 DGDQ 136
>gi|449437400|ref|XP_004136480.1| PREDICTED: uncharacterized protein LOC101219460 [Cucumis sativus]
Length = 277
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 88/124 (70%), Gaps = 6/124 (4%)
Query: 8 EFSPRISVDSP-RHSGALSL-----MIGGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDIE 61
+F P S +P +H + SL MI G SRKN Y +LP QPL LSV KLDGS FDI+
Sbjct: 13 DFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSSFDIQ 72
Query: 62 VMKTATIAELRQAVEAAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIR 121
V ++AT+AEL+ AVE FSHMP+ GPGKISW HVW HFCLCY GQKL+ + D I +GI+
Sbjct: 73 VRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLVDDADYIASFGIK 132
Query: 122 DGDQ 125
DGDQ
Sbjct: 133 DGDQ 136
>gi|297798732|ref|XP_002867250.1| hypothetical protein ARALYDRAFT_491506 [Arabidopsis lyrata subsp.
lyrata]
gi|297313086|gb|EFH43509.1| hypothetical protein ARALYDRAFT_491506 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 90/116 (77%), Gaps = 5/116 (4%)
Query: 15 VDSPRHSGALSL----MIGGF-SRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIA 69
+D PR S A SL +I G R++F+YN++PE+P+KL+V KLDGS F I+V+KTAT+
Sbjct: 1 MDFPRRSFAASLSPLRLIDGLPRRRSFNYNQMPEEPIKLTVLKLDGSSFGIQVLKTATVG 60
Query: 70 ELRQAVEAAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
EL+ AVEAAFSH+P +GPGKISWPHVWG FCL Y ++LI E++ + +GI+DGDQ
Sbjct: 61 ELKMAVEAAFSHLPISGPGKISWPHVWGQFCLSYEDKRLINESEYLLEFGIKDGDQ 116
>gi|145351239|ref|NP_194954.2| ubiquitin-like family protein [Arabidopsis thaliana]
gi|26450559|dbj|BAC42392.1| unknown protein [Arabidopsis thaliana]
gi|332660628|gb|AEE86028.1| ubiquitin-like family protein [Arabidopsis thaliana]
Length = 239
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 88/113 (77%), Gaps = 5/113 (4%)
Query: 18 PRHSGALSL----MIGGF-SRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELR 72
PR S A SL +I G R++F+YN++PE+P+KL+V KLDGS F I+V+KTAT+ EL+
Sbjct: 5 PRRSLAASLSPLRLIDGLPRRRSFNYNQMPEEPIKLTVLKLDGSSFGIQVLKTATVGELK 64
Query: 73 QAVEAAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
AVEAAFSH+P +GPGKISWPHVWG FCL Y ++LI E++ + +GI+DGDQ
Sbjct: 65 MAVEAAFSHLPISGPGKISWPHVWGQFCLSYEDKRLINESEYLTEFGIKDGDQ 117
>gi|297808549|ref|XP_002872158.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317995|gb|EFH48417.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 208
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 78/98 (79%)
Query: 28 IGGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGP 87
+G F R+ FSY+KLP +P++LSV KLDGS FD+ V+ +AT+ +L+ A+E AFSH+PK GP
Sbjct: 1 MGSFHRRTFSYDKLPTEPIRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKKGP 60
Query: 88 GKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
KISW HVWGHFCLC+ GQKLI + D I YG++DGD+
Sbjct: 61 SKISWSHVWGHFCLCFGGQKLITDTDCIGSYGLKDGDE 98
>gi|388501394|gb|AFK38763.1| unknown [Medicago truncatula]
Length = 226
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 75/95 (78%)
Query: 31 FSRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKI 90
FS K+ Y+KLP +PL+LSV KLDG+ FD+ V K ATIAEL+ AVE FS+MP+ GP KI
Sbjct: 33 FSTKSLLYDKLPSEPLRLSVLKLDGTSFDVHVSKNATIAELKDAVEGVFSYMPQHGPAKI 92
Query: 91 SWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
SWPHVWG FCLCY+GQKL+ E D +K YG++D DQ
Sbjct: 93 SWPHVWGQFCLCYDGQKLVTEKDYLKNYGVKDSDQ 127
>gi|15239396|ref|NP_197916.1| ubiquitin-like domain-containing protein-like protein [Arabidopsis
thaliana]
gi|26451503|dbj|BAC42849.1| unknown protein [Arabidopsis thaliana]
gi|28973251|gb|AAO63950.1| unknown protein [Arabidopsis thaliana]
gi|332006045|gb|AED93428.1| ubiquitin-like domain-containing protein-like protein [Arabidopsis
thaliana]
Length = 208
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 78/98 (79%)
Query: 28 IGGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGP 87
+G F R+ FSY+KLP +P++LSV KLDGS FD+ V+ +AT+ +L+ A+E AFSH+PK GP
Sbjct: 1 MGSFHRRTFSYDKLPNEPIRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKKGP 60
Query: 88 GKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
KISW HVWGHFCLC+ GQKLI + D I YG++DGD+
Sbjct: 61 SKISWSHVWGHFCLCFGGQKLITDTDCIGNYGMKDGDE 98
>gi|21554720|gb|AAM63670.1| unknown [Arabidopsis thaliana]
Length = 208
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 78/98 (79%)
Query: 28 IGGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGP 87
+G F R+ FSY+KLP +P++LSV KLDGS FD+ V+ +AT+ +L+ A+E AFSH+PK GP
Sbjct: 1 MGSFHRRTFSYDKLPNEPIRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKKGP 60
Query: 88 GKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
KISW HVWGHFCLC+ GQKLI + D I YG++DGD+
Sbjct: 61 SKISWSHVWGHFCLCFGGQKLITDTDCIGNYGMKDGDE 98
>gi|357437001|ref|XP_003588776.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
gi|355477824|gb|AES59027.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
Length = 266
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 75/95 (78%)
Query: 31 FSRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKI 90
FS K+ Y+KLP +PL+LSV KLDG+ FD+ V K ATIAEL+ AVE FS+MP+ GP KI
Sbjct: 33 FSTKSLLYDKLPSEPLRLSVLKLDGTSFDVHVSKNATIAELKDAVEGVFSYMPQHGPAKI 92
Query: 91 SWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
SWPHVWG FCLCY+GQKL+ E D +K YG++D DQ
Sbjct: 93 SWPHVWGQFCLCYDGQKLVTEKDYLKNYGVKDSDQ 127
>gi|356518246|ref|XP_003527790.1| PREDICTED: uncharacterized protein LOC100790105 [Glycine max]
Length = 258
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
Query: 22 GALSLMIGGF-----SRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE 76
G SLMI S +FSY++LP Q L LS+ KLD S F +EV AT+AEL+QAVE
Sbjct: 11 GERSLMIVSHEIPQRSLSSFSYDRLPSQTLILSILKLDASSFHVEVANAATVAELKQAVE 70
Query: 77 AAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
A FSH+P+ GPGKI WP VW FCLCY GQKL+ E D I+ YGI+DGDQ
Sbjct: 71 AVFSHVPQKGPGKILWPLVWRQFCLCYQGQKLVSEMDYIRDYGIKDGDQ 119
>gi|145334195|ref|NP_001078478.1| ubiquitin-like family protein [Arabidopsis thaliana]
gi|332660629|gb|AEE86029.1| ubiquitin-like family protein [Arabidopsis thaliana]
Length = 204
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 69/85 (81%), Gaps = 3/85 (3%)
Query: 41 LPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKISWPHVWGHFC 100
+PE+P+KL+V KLDGS F V+KTAT+ EL+ AVEAAFSH+P +GPGKISWPHVWG FC
Sbjct: 1 MPEEPIKLTVLKLDGSSF---VLKTATVGELKMAVEAAFSHLPISGPGKISWPHVWGQFC 57
Query: 101 LCYNGQKLICENDNIKYYGIRDGDQ 125
L Y ++LI E++ + +GI+DGDQ
Sbjct: 58 LSYEDKRLINESEYLTEFGIKDGDQ 82
>gi|15220048|ref|NP_178123.1| ubiquitin-like domain-containing protein kinase [Arabidopsis
thaliana]
gi|54261721|gb|AAV31164.1| At1g80060 [Arabidopsis thaliana]
gi|58331795|gb|AAW70395.1| At1g80060 [Arabidopsis thaliana]
gi|332198231|gb|AEE36352.1| ubiquitin-like domain-containing protein kinase [Arabidopsis
thaliana]
Length = 243
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
Query: 14 SVDSPRHSGALSLMIGG-FSRKNFSYNKLPEQ-PLKLSVRKLDGSCFDIEVMKTATIAEL 71
S+ PR + +L GG S + SY KLP Q +KLSV KL+GS FD+EV K ++AEL
Sbjct: 19 SLIDPRFLSSFALNDGGSISGRRSSYLKLPPQGRIKLSVVKLNGSLFDVEVAKDCSVAEL 78
Query: 72 RQAVEAAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
++AVE F+ P G G ISW HVWGHFCLCY Q+L+ + +I+Y G+ DGDQ
Sbjct: 79 KRAVEQVFTISPLEGHGMISWSHVWGHFCLCYRDQRLVNDKTSIRYLGLNDGDQ 132
>gi|255572471|ref|XP_002527170.1| conserved hypothetical protein [Ricinus communis]
gi|223533435|gb|EEF35183.1| conserved hypothetical protein [Ricinus communis]
Length = 114
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Query: 24 LSLMIGGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMP 83
+S+M + +F+Y +LP++ +LSV KL+GS F+++V + AT+ EL+QAVE F+H P
Sbjct: 1 MSMMCPSLTCVSFAYERLPQEQFRLSVLKLNGSFFEVQVSRMATVGELKQAVENVFTHSP 60
Query: 84 KTGPG-KISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
+ ISW HVW HFCLCY GQKLI + I+ +GI+DGDQ
Sbjct: 61 EDDMHMNISWWHVWSHFCLCYKGQKLIHDKAYIQSFGIKDGDQ 103
>gi|356509914|ref|XP_003523687.1| PREDICTED: uncharacterized protein LOC100781177 [Glycine max]
Length = 259
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 63/91 (69%)
Query: 35 NFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKISWPH 94
+F ++ + L LS+ KLD S F +EV AT+AEL+QAVEA F +P+ GPGKI WP
Sbjct: 26 SFFNDRFHSETLILSILKLDASSFHVEVANAATVAELKQAVEAVFCRVPQKGPGKILWPL 85
Query: 95 VWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
VW FCL Y GQKL+ E+D I+ +GI DGDQ
Sbjct: 86 VWRQFCLSYQGQKLVSESDYIRDFGIEDGDQ 116
>gi|357466173|ref|XP_003603371.1| hypothetical protein MTR_3g106830 [Medicago truncatula]
gi|355492419|gb|AES73622.1| hypothetical protein MTR_3g106830 [Medicago truncatula]
Length = 302
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 80/153 (52%), Gaps = 38/153 (24%)
Query: 6 MEEFSPRISVDSPRHSGALSLMIGGFSRKNFSYNKLPEQPLKLSVRKLDGSCF------- 58
M E + +S +SPR S ++ L Y+KLP Q L L+V KLD S F
Sbjct: 1 MSELTS-VSNESPRRSLSIQLSSMIIVDCTLPYDKLPSQNLTLTVLKLDSSSFRNLPLLA 59
Query: 59 --------------------------DIEVMKTATIAELRQAVEAAFSHMPKTGPGKISW 92
++EV KTAT+A L+QAVEAAF H P+ KISW
Sbjct: 60 DFSSNSYSVLLHFFDLEFICKILIVSEVEVAKTATVAVLKQAVEAAFRHKPE----KISW 115
Query: 93 PHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
P VWG FCLCY GQKL+ E D ++ YGI+DGDQ
Sbjct: 116 PLVWGQFCLCYEGQKLVTETDYLRDYGIKDGDQ 148
>gi|225442930|ref|XP_002265295.1| PREDICTED: uncharacterized protein LOC100262712 [Vitis vinifera]
Length = 232
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%)
Query: 35 NFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKISWPH 94
N SY KL KLS+ KLDG+ FD++V + A +AEL+QA+E FS ISW H
Sbjct: 38 NLSYRKLSLDLYKLSILKLDGTSFDVQVARNAKVAELKQAIEEVFSLSTNEDEENISWSH 97
Query: 95 VWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
VWGHFCLCY GQKL+ + +I+ GI+DGDQ
Sbjct: 98 VWGHFCLCYEGQKLVNDKAHIRDVGIQDGDQ 128
>gi|297743473|emb|CBI36340.3| unnamed protein product [Vitis vinifera]
Length = 630
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%)
Query: 35 NFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKISWPH 94
N SY KL KLS+ KLDG+ FD++V + A +AEL+QA+E FS ISW H
Sbjct: 38 NLSYRKLSLDLYKLSILKLDGTSFDVQVARNAKVAELKQAIEEVFSLSTNEDEENISWSH 97
Query: 95 VWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
VWGHFCLCY GQKL+ + +I+ GI+DGDQ
Sbjct: 98 VWGHFCLCYEGQKLVNDKAHIRDVGIQDGDQ 128
>gi|297839931|ref|XP_002887847.1| hypothetical protein ARALYDRAFT_895992 [Arabidopsis lyrata subsp.
lyrata]
gi|297333688|gb|EFH64106.1| hypothetical protein ARALYDRAFT_895992 [Arabidopsis lyrata subsp.
lyrata]
Length = 243
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Query: 14 SVDSPRHSGALSLMIGG-FSRKNFSYNKLPEQ-PLKLSVRKLDGSCFDIEVMKTATIAEL 71
S+ PR + +L GG S + SY KLP Q +KLSV KL+GS FD+EV K ++AEL
Sbjct: 19 SLIEPRFLSSFALNDGGSISGRRSSYLKLPPQGRIKLSVVKLNGSLFDVEVAKDCSVAEL 78
Query: 72 RQAVEAAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
++AVE F+ P G ISW HVWGHFCL Y Q+L+ + +I+Y + DGDQ
Sbjct: 79 KRAVEQVFTISPLEAHGMISWSHVWGHFCLSYRDQRLVNDKTSIRYLALSDGDQ 132
>gi|255553225|ref|XP_002517655.1| conserved hypothetical protein [Ricinus communis]
gi|223543287|gb|EEF44819.1| conserved hypothetical protein [Ricinus communis]
Length = 274
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 69/97 (71%)
Query: 29 GGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPG 88
GG + +SY KLP+Q LKL+V KLDGS FD+ + + AT+AEL+QAVE FS P+ G
Sbjct: 57 GGLVVRRYSYLKLPQQLLKLTVLKLDGSSFDVNIGRNATVAELKQAVEEIFSSSPEEGHD 116
Query: 89 KISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
KISW VWGHFCL Y QKLI + I+ +GI+DGDQ
Sbjct: 117 KISWSLVWGHFCLSYENQKLINDKVCIRNFGIKDGDQ 153
>gi|242064292|ref|XP_002453435.1| hypothetical protein SORBIDRAFT_04g006000 [Sorghum bicolor]
gi|241933266|gb|EES06411.1| hypothetical protein SORBIDRAFT_04g006000 [Sorghum bicolor]
Length = 274
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 63/92 (68%)
Query: 33 RKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKISW 92
R +FSY +LPE L+L+V+KLD S FDIE+ ++AT+ EL+ A+E FS + ISW
Sbjct: 46 RSSFSYRRLPEPRLRLTVQKLDDSFFDIEIARSATVWELKVAIENLFSDLYDDAQKTISW 105
Query: 93 PHVWGHFCLCYNGQKLICENDNIKYYGIRDGD 124
HVW HFCLC+ +++ + ++ +GIRDGD
Sbjct: 106 NHVWSHFCLCFKDERMTDDKATLRGFGIRDGD 137
>gi|326500444|dbj|BAK06311.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 304
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Query: 28 IGGFS--RKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKT 85
IG + R +FSY++LPE PL+L+VRKLD S FD+ + ++A + EL+ A++ F +
Sbjct: 68 IGALACGRASFSYHRLPEPPLRLTVRKLDDSYFDVRIARSAAVWELKAAIQGVFVALYHD 127
Query: 86 GPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
++W HVW HFCLC+ +K++ + ++ +GI+DGD+
Sbjct: 128 MENAVTWQHVWSHFCLCFKDEKMMDDKATLRAFGIKDGDE 167
>gi|259490128|ref|NP_001159154.1| hypothetical protein [Zea mays]
gi|223942319|gb|ACN25243.1| unknown [Zea mays]
gi|413935984|gb|AFW70535.1| hypothetical protein ZEAMMB73_861622 [Zea mays]
Length = 266
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 21 SGALSLMIGGFS--RKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAA 78
+G + IG + R +FSY +LPE L+L+V+KLD S FDIE+ ++AT+ EL+ +E
Sbjct: 29 AGGGTDCIGALACGRSSFSYRRLPEPRLRLTVQKLDDSFFDIEIARSATVWELKVTIENL 88
Query: 79 FSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGD 124
FS + ISW HVW HFCLC+ ++L + ++ +GIRDGD
Sbjct: 89 FSALYDDTQKTISWNHVWSHFCLCFKDERLTDDKATLRGFGIRDGD 134
>gi|357138938|ref|XP_003571043.1| PREDICTED: uncharacterized protein LOC100841643 [Brachypodium
distachyon]
Length = 320
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 63/91 (69%)
Query: 35 NFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKISWPH 94
+FSY++LPE L+L++RKLD S FD+++ ++A + EL+ A+EA F + I+W H
Sbjct: 94 SFSYHRLPEPRLRLTIRKLDDSYFDVQIARSAAVWELKAAIEAVFIALFYDMDNAITWQH 153
Query: 95 VWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
VW HFCLC+ +KL + ++ +GI+DGD+
Sbjct: 154 VWSHFCLCFKDEKLTDDRATLRAFGIKDGDE 184
>gi|2864616|emb|CAA16963.1| hypothetical protein [Arabidopsis thaliana]
gi|7270131|emb|CAB79945.1| hypothetical protein [Arabidopsis thaliana]
Length = 364
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 5/80 (6%)
Query: 18 PRHSGALSL----MIGGF-SRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIAELR 72
PR S A SL +I G R++F+YN++PE+P+KL+V KLDGS F I+V+KTAT+ EL+
Sbjct: 195 PRRSLAASLSPLRLIDGLPRRRSFNYNQMPEEPIKLTVLKLDGSSFGIQVLKTATVGELK 254
Query: 73 QAVEAAFSHMPKTGPGKISW 92
AVEAAFSH+P +GPGKISW
Sbjct: 255 MAVEAAFSHLPISGPGKISW 274
>gi|449469242|ref|XP_004152330.1| PREDICTED: uncharacterized protein LOC101206096 [Cucumis sativus]
Length = 243
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 38 YNKLPEQP-LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKISWPHVW 96
Y LP Q + L V KLDGS F I V + +T+A+L++A+E F + KI+W +W
Sbjct: 47 YRLLPRQDHIDLFVLKLDGSVFGIRVSRNSTVADLKRAIEKVFDSPGGSEHYKITWSLIW 106
Query: 97 GHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
GHFCLCY G+KLI + IK YGI+DGDQ
Sbjct: 107 GHFCLCYEGEKLIDDKTCIKGYGIKDGDQ 135
>gi|255641762|gb|ACU21151.1| unknown [Glycine max]
Length = 113
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%)
Query: 10 SPRISVDSPRHSGALSLMIGGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKTATIA 69
+P + +PR S + S + F+RK+F Y++LP QPL+L+V KLDGSCF I+V K AT+A
Sbjct: 16 NPNPNTKTPRRSSSSSSSLAIFARKSFFYDRLPSQPLRLTVLKLDGSCFHIQVSKMATVA 75
Query: 70 ELRQAVEAAFSHMPKTGPGKISWPHVWGHFC 100
EL+ AVEA FSH+P G K G+F
Sbjct: 76 ELKDAVEAVFSHVPHKGQQKFHGRMFGGNFV 106
>gi|222622336|gb|EEE56468.1| hypothetical protein OsJ_05682 [Oryza sativa Japonica Group]
Length = 370
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Query: 33 RKNFSYNKLPEQPLKL-SVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHM-PKTGPGKI 90
R +FSY +LPE +VRKLD S FD+++ ++A + EL+ A+E F+ + +T I
Sbjct: 34 RTSFSYRRLPEPRRLRLTVRKLDDSYFDVQIARSAAVWELKAAIEDVFAALYDETDNKAI 93
Query: 91 SWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
SW HVW HFCLC+ +KL + ++ +GIRDGD+
Sbjct: 94 SWQHVWSHFCLCFKDEKLTDDKATLRAFGIRDGDE 128
>gi|168033033|ref|XP_001769021.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679655|gb|EDQ66099.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 175
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 45 PLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKT--GPGKISWPHVWGHFCLC 102
+KLS+ KLDGS FD+ V+ + + +L+QAV H+ ++ G +ISW HVWGHFCLC
Sbjct: 51 SMKLSILKLDGSHFDVVVLTNSRVRDLKQAVVKYVDHLEQSELGHKRISWQHVWGHFCLC 110
Query: 103 YNGQKLICENDNIKYYGIRDGDQ 125
+ +KL+ ++ + +GIR+ DQ
Sbjct: 111 HGTEKLVDDDARLAGFGIRNNDQ 133
>gi|218190221|gb|EEC72648.1| hypothetical protein OsI_06171 [Oryza sativa Indica Group]
Length = 360
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Query: 33 RKNFSYNKLPEQPLKL-SVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHM-PKTGPGKI 90
R +FSY +LPE +VRKLD S FD+++ ++A + EL+ A+E F+ + +T I
Sbjct: 34 RTSFSYRRLPEPRRLRLTVRKLDDSYFDVQIARSAAVWELKAAIEDVFAALYDETDNKAI 93
Query: 91 SWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
SW HVW HFCLC+ +KL + ++ +GIRDGD+
Sbjct: 94 SWQHVWSHFCLCFKDEKLTDDKATLRAFGIRDGDE 128
>gi|115444711|ref|NP_001046135.1| Os02g0188500 [Oryza sativa Japonica Group]
gi|46389904|dbj|BAD15525.1| unknown protein [Oryza sativa Japonica Group]
gi|113535666|dbj|BAF08049.1| Os02g0188500 [Oryza sativa Japonica Group]
gi|215678897|dbj|BAG95334.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 324
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Query: 33 RKNFSYNKLPEQPLKL-SVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHM-PKTGPGKI 90
R +FSY +LPE +VRKLD S FD+++ ++A + EL+ A+E F+ + +T I
Sbjct: 100 RTSFSYRRLPEPRRLRLTVRKLDDSYFDVQIARSAAVWELKAAIEDVFAALYDETDNKAI 159
Query: 91 SWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
SW HVW HFCLC+ +KL + ++ +GIRDGD+
Sbjct: 160 SWQHVWSHFCLCFKDEKLTDDKATLRAFGIRDGDE 194
>gi|224065725|ref|XP_002301940.1| predicted protein [Populus trichocarpa]
gi|222843666|gb|EEE81213.1| predicted protein [Populus trichocarpa]
Length = 173
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 45 PLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHM--PKTGPGKISWPHVWGHFCLC 102
+++SV+KLDG+ FD+ +M +AT+ +L+ A++ M K G ISW VW +F L
Sbjct: 60 AMRISVQKLDGTSFDVALMNSATVKDLKLAIKRKLIEMEQSKMGHRHISWKKVWANFALS 119
Query: 103 YNGQKLICENDNIKYYGIRDGDQ 125
Y+ QKL+ +N ++ GIR+ Q
Sbjct: 120 YHNQKLLDDNSALQDSGIRNNSQ 142
>gi|167999003|ref|XP_001752207.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696602|gb|EDQ82940.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 45 PLKLSVRKLDGSCFDIEVMKTATIAELRQAV--EAAFSHMPKTGPGKISWPHVWGHFCLC 102
+KLS+ KLDGS ++ V+ A + +L+QAV F G ISW HVW HFCL
Sbjct: 50 AMKLSILKLDGSHLEVAVLNNAKVRDLKQAVMKYVDFQEQSHLGQRHISWSHVWDHFCLS 109
Query: 103 YNGQKLICENDNIKYYGIRDGDQ 125
Y +KL+ ++ + +GIR D+
Sbjct: 110 YGKEKLLDDDARLHDFGIRKNDE 132
>gi|356538589|ref|XP_003537785.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like isoform 1 [Glycine max]
Length = 163
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 45 PLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGK--ISWPHVWGHFCLC 102
+++SV KLDG+ D+ VM +AT+ +L+ A++ + M ++ G ISW HVW ++CL
Sbjct: 50 AMRISVLKLDGTTLDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISWKHVWANYCLS 109
Query: 103 YNGQKLICENDNIKYYGIRDGDQ 125
+ KL+ +N+ ++ +G+R+ Q
Sbjct: 110 CHNNKLLDDNEALQNFGVRNNSQ 132
>gi|116779533|gb|ABK21326.1| unknown [Picea sitchensis]
Length = 186
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 45 PLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKISWPHVWGHFCLCYN 104
++L + ++D + FD+ V TA++ EL++A+E F + + GKISW HVWG+FCL Y
Sbjct: 28 SIRLCIFRMDNTSFDVSVPGTASVLELKKAIEDKFGN-SQMEEGKISWCHVWGNFCLTYE 86
Query: 105 GQKLICENDNIKYYGIRDGDQ 125
++L+ + + +GI+D D+
Sbjct: 87 DRELVNDGSLLSSFGIKDSDE 107
>gi|116784054|gb|ABK23196.1| unknown [Picea sitchensis]
Length = 186
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 45 PLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKISWPHVWGHFCLCYN 104
++L + ++D + FD+ V TA++ EL++A+E F + + GKISW HVWG+FCL Y
Sbjct: 28 SIRLCIFRMDNTSFDVSVPGTASVLELKKAIEDKFGN-SQMEEGKISWCHVWGNFCLTYE 86
Query: 105 GQKLICENDNIKYYGIRDGDQ 125
++L+ + + +GI+D D+
Sbjct: 87 DRELVNDGSLLSSFGIKDSDE 107
>gi|414584945|tpg|DAA35516.1| TPA: hypothetical protein ZEAMMB73_975050 [Zea mays]
Length = 177
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMP--KTGPGKISWPHVWGHFCLCY 103
++L+V KLD + FD+ V+ +AT+ +L+ A+ + + K G ISW HVW ++CL +
Sbjct: 61 MRLTVVKLDNTSFDVAVLNSATVKDLKLAIRKKINEIEQEKMGHRHISWKHVWDNYCLTH 120
Query: 104 NGQKLICENDNIKYYGIRDGDQ 125
+ +KLI +N + YG+R+ +
Sbjct: 121 HNEKLIEDNSTLSSYGVRNNSK 142
>gi|388501190|gb|AFK38661.1| unknown [Lotus japonicus]
Length = 163
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 45 PLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPG--KISWPHVWGHFCLC 102
+++S+ KLD + FD+ VM +AT+ +L+ A++ + M ++ G +ISW VW CL
Sbjct: 50 AMRISIIKLDATSFDVTVMNSATVKDLKLAIKKKVNDMEQSNMGHRQISWRGVWAKCCLS 109
Query: 103 YNGQKLICENDNIKYYGIRDGDQ 125
YN KL+ ++D ++ +G+R+ Q
Sbjct: 110 YNNHKLLNDDDALQNFGVRNNSQ 132
>gi|356541000|ref|XP_003538972.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Glycine max]
Length = 187
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 4 IAMEEFSPRISVDSPRHSGALSLMIGG-----------FSRKNFSYNKLPEQPLKLSVRK 52
I MEE++ + SV R + L+ ++ F+ + N +++SV K
Sbjct: 23 INMEEYN-KSSVKKARLNSLLTTLLDDPILSDVPKNPTFADVDTLINLELGSAMRISVLK 81
Query: 53 LDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGK--ISWPHVWGHFCLCYNGQKLIC 110
LDG+ D+ VM +AT+ +L+ A++ + M ++ G ISW HVW ++CL + KL+
Sbjct: 82 LDGTTLDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISWKHVWANYCLSCHNNKLLD 141
Query: 111 ENDNIKYYGIRDGDQ 125
+N+ ++ +G+R+ Q
Sbjct: 142 DNEALQNFGVRNNSQ 156
>gi|356538591|ref|XP_003537786.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like isoform 2 [Glycine max]
Length = 190
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 4 IAMEEFSPRISVDSPRHSGALSLMIGG-----------FSRKNFSYNKLPEQPLKLSVRK 52
I MEE++ + SV R + L+ ++ F+ + N +++SV K
Sbjct: 26 INMEEYN-KSSVKKARLNSLLTTLLDDPILSDVPKNPTFADVDTLINLELGSAMRISVLK 84
Query: 53 LDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGK--ISWPHVWGHFCLCYNGQKLIC 110
LDG+ D+ VM +AT+ +L+ A++ + M ++ G ISW HVW ++CL + KL+
Sbjct: 85 LDGTTLDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISWKHVWANYCLSCHNNKLLD 144
Query: 111 ENDNIKYYGIRDGDQ 125
+N+ ++ +G+R+ Q
Sbjct: 145 DNEALQNFGVRNNSQ 159
>gi|449455569|ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Cucumis sativus]
Length = 181
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 45 PLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHM--PKTGPGKISWPHVWGHFCLC 102
+++SV KLDG+ D+ +M +AT+ +L+ A++ + M K G ISW HVW +FCL
Sbjct: 68 AMRISVLKLDGTAIDVVIMNSATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLA 127
Query: 103 YNGQKLICENDNIKYYGIRDGDQ 125
+ +KL+ ++ ++ +GIR+ Q
Sbjct: 128 HLNEKLLDDSSVLQDFGIRNNSQ 150
>gi|225459779|ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Vitis vinifera]
gi|302141700|emb|CBI18903.3| unnamed protein product [Vitis vinifera]
Length = 176
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 45 PLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHM--PKTGPGKISWPHVWGHFCLC 102
+++SV KLD + FD+ V+ +AT+ +L+ A++ + M K G ISW HVW +FCL
Sbjct: 63 AMRISVIKLDSTSFDVAVLNSATVKDLKLAIKKKINDMEQSKMGHRHISWKHVWANFCLS 122
Query: 103 YNGQKLICENDNIKYYGIRDGDQ 125
Y KLI + ++ +GI + Q
Sbjct: 123 YYNDKLINDGSALQDFGIHNNSQ 145
>gi|284444059|gb|ADB85768.1| hypothetical protein [Wolffia arrhiza]
Length = 164
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 45 PLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMP--KTGPGKISWPHVWGHFCLC 102
+K+SV KLDGS FD+ V +A++ +L+ A+ M + G ISW HVW +FCL
Sbjct: 47 AMKISVLKLDGSSFDVVVSNSASVKDLKLAIRKKIEAMQEGQMGHRHISWRHVWANFCLS 106
Query: 103 YNGQKLICENDNIKYYGIRDGDQ 125
++ +KLI ++ +++ +GI Q
Sbjct: 107 HDNEKLIEDDSSLQKFGIHSNSQ 129
>gi|449519748|ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Cucumis sativus]
Length = 209
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHM--PKTGPGKISWPHVWGHFCLCY 103
+++SV KLDG+ D+ +M +AT+ +L+ A++ + M K G ISW HVW +FCL +
Sbjct: 97 MRISVLKLDGTAIDVVIMNSATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAH 156
Query: 104 NGQKLICENDNIKYYGIRDGDQ 125
+KL+ ++ ++ +GIR+ Q
Sbjct: 157 LNEKLLDDSSVLQDFGIRNNSQ 178
>gi|255638264|gb|ACU19445.1| unknown [Glycine max]
Length = 190
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 4 IAMEEFSPRISVDSPRHSGALSLMIGG-----------FSRKNFSYNKLPEQPLKLSVRK 52
I MEE++ + SV R + L+ ++ F+ + N +++SV K
Sbjct: 26 INMEEYN-KSSVKKARLNSLLTTLLDDPILFDVPKNPTFADVDTFINLELGSAMRISVLK 84
Query: 53 LDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGK--ISWPHVWGHFCLCYNGQKLIC 110
LDG+ D+ VM +AT+ +L+ A++ + M ++ G ISW HVW ++CL + KL+
Sbjct: 85 LDGTTLDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISWKHVWANYCLSCHNNKLLD 144
Query: 111 ENDNIKYYGIRDGDQ 125
+N+ ++ +G+R+ Q
Sbjct: 145 DNEALQNFGVRNNFQ 159
>gi|242074686|ref|XP_002447279.1| hypothetical protein SORBIDRAFT_06g031870 [Sorghum bicolor]
gi|241938462|gb|EES11607.1| hypothetical protein SORBIDRAFT_06g031870 [Sorghum bicolor]
Length = 183
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGK--ISWPHVWGHFCLCY 103
++LSV KLD + F++ V+ +AT+ +L+ A+ + + + G ISW HVW ++CL +
Sbjct: 71 MRLSVVKLDNTSFEVAVLNSATVKDLKLAIRKKINEIEQEQMGHRHISWKHVWDNYCLTH 130
Query: 104 NGQKLICENDNIKYYGIRDGDQ 125
+ +KLI +N + YG+R+ +
Sbjct: 131 HNEKLINDNSALSAYGVRNNSK 152
>gi|307136304|gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 181
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 45 PLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAF--SHMPKTGPGKISWPHVWGHFCLC 102
+++SV KLDG+ D+ +M +AT+ +L+ A++ + K G ISW HVW +FCL
Sbjct: 68 AMRISVLKLDGTAIDVLIMNSATLKDLKLAIKQKVNETEQSKMGHRHISWKHVWANFCLA 127
Query: 103 YNGQKLICENDNIKYYGIRDGDQ 125
++ +K++ ++ ++ +GIR+ Q
Sbjct: 128 HHNEKILDDSSVLQDFGIRNNSQ 150
>gi|357473839|ref|XP_003607204.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
gi|355508259|gb|AES89401.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
Length = 162
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGK--ISWPHVWGHFCLCY 103
++++V KLD + FD+ +M TAT+ +L+ A++ ++M ++ G ISW VW ++CL +
Sbjct: 50 MRITVLKLDTTSFDVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISWRSVWANYCLSF 109
Query: 104 NGQKLICENDNIKYYGIRDGDQ 125
+ KL+ ++D ++ G+R+ Q
Sbjct: 110 DNNKLLNDDDVLQNLGVRNNSQ 131
>gi|357473841|ref|XP_003607205.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
gi|355508260|gb|AES89402.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
Length = 146
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 45 PLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGK--ISWPHVWGHFCLC 102
++++V KLD + FD+ +M TAT+ +L+ A++ ++M ++ G ISW VW ++CL
Sbjct: 49 AMRITVLKLDTTSFDVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISWRSVWANYCLS 108
Query: 103 YNGQKLICENDNIKYYGIRDGDQ 125
++ KL+ ++D ++ G+R+ Q
Sbjct: 109 FDNNKLLNDDDVLQNLGVRNNSQ 131
>gi|357477471|ref|XP_003609021.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
gi|355510076|gb|AES91218.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
Length = 441
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGK--ISWPHVWGHFCLCY 103
++++V KLD + FD+ +M TAT+ +L+ A++ ++M ++ G ISW VW ++CL +
Sbjct: 319 MRITVLKLDTTSFDVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISWRSVWANYCLSF 378
Query: 104 NGQKLICENDNIKYYGIRDGDQ 125
+ KL+ ++D ++ G+R+ Q
Sbjct: 379 DNNKLLNDDDVLQNLGVRNNSQ 400
>gi|388495574|gb|AFK35853.1| unknown [Lotus japonicus]
Length = 162
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 45 PLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPG--KISWPHVWGHFCLC 102
+++S+ KLD + FD+ VM +AT+ +L+ A++ + M ++ G +ISW VW CL
Sbjct: 50 AMRISIIKLDATSFDVTVMNSATVKDLKLAIKKKVNDMEQSNMGHRQISWRGVWAKCCLS 109
Query: 103 YNGQKLICENDNIKYYGIRDGDQ 125
YN KL+ +D ++ +G+R+ Q
Sbjct: 110 YNNHKLL-NDDALQNFGVRNNSQ 131
>gi|30680468|ref|NP_187443.2| U11/U12 small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|27754393|gb|AAO22645.1| unknown protein [Arabidopsis thaliana]
gi|48310596|gb|AAT41846.1| At3g07860 [Arabidopsis thaliana]
gi|332641091|gb|AEE74612.1| U11/U12 small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 165
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGK--ISWPHVWGHFCLCY 103
++LSV KLDGS D+ VM +AT+ +L+ ++ + M + G ISW HVW +FCL
Sbjct: 52 MRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSC 111
Query: 104 NGQKLICENDNIKYYGIRDGDQ 125
N +KL+ +N ++ GIR+ Q
Sbjct: 112 NNEKLLDDNAVLQDVGIRNNSQ 133
>gi|38346077|emb|CAE04845.2| OSJNBa0084K01.17 [Oryza sativa Japonica Group]
gi|222629718|gb|EEE61850.1| hypothetical protein OsJ_16518 [Oryza sativa Japonica Group]
Length = 187
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMP--KTGPGKISWPHVWGHFCLCY 103
++L+V KLDG+ FD+ ++ TAT+ +L+ A+ + K G ISW H+W ++CL +
Sbjct: 75 MRLTVVKLDGTSFDVAMLNTATVKDLKMAIRKKTDEIEQEKMGHRHISWKHIWDNYCLTH 134
Query: 104 NGQKLICENDNIKYYGI 120
+KLI +N + GI
Sbjct: 135 QNEKLIDDNSVLSSNGI 151
>gi|116309855|emb|CAH66890.1| OSIGBa0099L20.5 [Oryza sativa Indica Group]
gi|218195764|gb|EEC78191.1| hypothetical protein OsI_17798 [Oryza sativa Indica Group]
Length = 187
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMP--KTGPGKISWPHVWGHFCLCY 103
++L+V KLDG+ FD+ ++ TAT+ +L+ A+ + K G ISW H+W ++CL +
Sbjct: 75 MRLTVVKLDGTSFDVAMLNTATVKDLKMAIRKKTDEIEQEKMGHRHISWKHIWDNYCLTH 134
Query: 104 NGQKLICENDNIKYYGI 120
+KLI +N + GI
Sbjct: 135 QNEKLIDDNSVLSSNGI 151
>gi|6648198|gb|AAF21196.1|AC013483_20 unknown protein [Arabidopsis thaliana]
Length = 232
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGK--ISWPHVWGHFCLCY 103
++LSV KLDGS D+ VM +AT+ +L+ ++ + M + G ISW HVW +FCL
Sbjct: 52 MRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSC 111
Query: 104 NGQKLICENDNIKYYGIRDGDQ 125
N +KL+ +N ++ GIR+ Q
Sbjct: 112 NNEKLLDDNAVLQDVGIRNNSQ 133
>gi|149392044|gb|ABR25901.1| conserved hypothetical protein [Oryza sativa Indica Group]
Length = 95
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 45 PLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMP--KTGPGKISWPHVWGHFCLC 102
++L+V KLDG+ FD+ ++ TAT+ +L+ A+ + K G ISW H+W ++CL
Sbjct: 1 AMRLTVVKLDGTSFDVAMLNTATVKDLKMAIRKKTDEIEPEKMGHRHISWKHIWDNYCLT 60
Query: 103 YNGQKLICENDNIKYYGI 120
+ +KLI +N + GI
Sbjct: 61 HQNEKLIDDNSVLSSNGI 78
>gi|357117689|ref|XP_003560596.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Brachypodium distachyon]
Length = 150
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPG--KISWPHVWGHFCLCY 103
+++ V KLD + FD+ V+ TAT+ +L+ A++ S + + G ISW ++W ++CL Y
Sbjct: 62 MRVIVVKLDDTSFDVPVLNTATVKDLKLAIKKKISEIEQGQMGYRHISWKYIWENYCLTY 121
Query: 104 NGQKLICENDNIKYYGIRDG 123
+KL +N + +G+R+
Sbjct: 122 QNEKLTDDNSALSSHGVRNN 141
>gi|297829342|ref|XP_002882553.1| hypothetical protein ARALYDRAFT_478124 [Arabidopsis lyrata subsp.
lyrata]
gi|297328393|gb|EFH58812.1| hypothetical protein ARALYDRAFT_478124 [Arabidopsis lyrata subsp.
lyrata]
Length = 165
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGK--ISWPHVWGHFCLCY 103
++LSV KLDGS D+ VM +AT+ +L+ ++ + + G ISW HVW +FCL
Sbjct: 52 MRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNETEQANMGHRHISWKHVWSNFCLSC 111
Query: 104 NGQKLICENDNIKYYGIRDGDQ 125
N +KL+ +N ++ GIR+ Q
Sbjct: 112 NNEKLLDDNALLQDVGIRNNSQ 133
>gi|291223915|ref|XP_002731950.1| PREDICTED: chromosome 16 open reading frame 33-like [Saccoglossus
kowalevskii]
Length = 162
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFS-HMPKTGPGK-ISWPHVWGHFCL 101
Q L + VRK +G + V++ AT+ +LR A++ F+ + + G K ISW ++W + L
Sbjct: 69 QALTVKVRKQNGEVIPVVVLQGATVRDLRNAIKRHFTMKLEREGGNKFISWRYIWKTYWL 128
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
C+ +KL N IK YGIR+ D+
Sbjct: 129 CFEEEKLTEINKKIKDYGIRNRDE 152
>gi|168056786|ref|XP_001780399.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668159|gb|EDQ54772.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 166
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFS--HMPKTGPGKISWPHVWGHFCLCY 103
++LS+ KLDG F++ V + +L+Q++ + G ISW HVW +FCL +
Sbjct: 55 IRLSILKLDGIHFEVTVPNNGKVRDLKQSIMMYVDSDEQSQLGHRHISWKHVWNNFCLSF 114
Query: 104 NGQKLICENDNIKYYGIRDGDQ 125
+KL+ ++ + +GIR+ D+
Sbjct: 115 GKEKLVDDDARLHDFGIRNNDE 136
>gi|198438499|ref|XP_002131302.1| PREDICTED: similar to U11/U12 snRNP 25K protein isoform 1 [Ciona
intestinalis]
Length = 143
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAV--EAAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + +R+ DG + + V + ATI EL++A+ + G ISW VW + L
Sbjct: 50 QAMTIRIRRADGFTYPVIVKQDATIGELKKAITRHVQLKQQREGGNQCISWRRVWKSYWL 109
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
Y+GQKL ++ +K YG+R+ D+
Sbjct: 110 YYDGQKLKEDSHKLKDYGLRNHDE 133
>gi|449527599|ref|XP_004170797.1| PREDICTED: uncharacterized LOC101206096 [Cucumis sativus]
Length = 230
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 14/89 (15%)
Query: 38 YNKLPEQP-LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKISWPHVW 96
Y LP Q + L V KLDGS F I V + +T+A+L++A+E F PG ++ +
Sbjct: 47 YRLLPRQDHIDLFVLKLDGSVFGIRVSRNSTVADLKRAIEKVFD-----SPGGVNTTRL- 100
Query: 97 GHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
+G+KLI + IK YGI+DGDQ
Sbjct: 101 -------HGEKLIDDKTCIKGYGIKDGDQ 122
>gi|390337966|ref|XP_001199326.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Strongylocentrotus purpuratus]
Length = 167
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFS--HMPKTGPGKISWPHVWGHFCL 101
Q + + VR+ +G + VM+TAT+ +L+ A++ F + KISW +VW + L
Sbjct: 70 QAMTVIVRRAEGDVMPVVVMQTATVQDLKSAIKRYFELKQDREEIKKKISWRYVWRSYYL 129
Query: 102 CYNGQKLICENDNIKYYGIRD 122
C+ G+KL + I+ +GIR+
Sbjct: 130 CFEGEKLTDDYKKIRDFGIRN 150
>gi|390333381|ref|XP_794255.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Strongylocentrotus purpuratus]
Length = 167
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFS--HMPKTGPGKISWPHVWGHFCL 101
Q + + VR+ +G + VM+TAT+ +L+ A++ F + KISW +VW + L
Sbjct: 70 QAMTVIVRRAEGDVMPVVVMQTATVQDLKSAIKRYFELKQDREEIKKKISWRYVWRSYYL 129
Query: 102 CYNGQKLICENDNIKYYGIRD 122
C+ G+KL + I+ +GIR+
Sbjct: 130 CFEGEKLTDDYKKIRDFGIRN 150
>gi|62955357|ref|NP_001017690.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Danio
rerio]
gi|62204893|gb|AAH93151.1| Zgc:112000 [Danio rerio]
Length = 173
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K DG I V+++AT+ +L++A+ + G +SW +VW F L
Sbjct: 80 QAMTVRVCKADGEVMPIVVVQSATVLDLKKAIRRYMELKQQREGGVKHVSWKYVWRTFHL 139
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
+NG+KL + +K YG+R+ D+
Sbjct: 140 VFNGEKLEDDRRKLKDYGVRNRDE 163
>gi|260814781|ref|XP_002602092.1| hypothetical protein BRAFLDRAFT_61248 [Branchiostoma floridae]
gi|229287398|gb|EEN58104.1| hypothetical protein BRAFLDRAFT_61248 [Branchiostoma floridae]
Length = 136
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q +K+ VRK G I V + AT+ +L+ A+ + G KISW +VW + L
Sbjct: 39 QAMKVIVRKECGGIMPIVVPQDATVVDLKHAISRYVTLKQTREGGTTKISWRYVWRTYWL 98
Query: 102 CYNGQKLICENDNIKYYGIRD 122
++G+KL N +K YGIR+
Sbjct: 99 TFDGEKLSQNNKKLKDYGIRN 119
>gi|443722217|gb|ELU11180.1| hypothetical protein CAPTEDRAFT_157309 [Capitella teleta]
Length = 174
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFS-HMPKTGPGK--ISWPHVWGHFC 100
Q + ++VR+ D I V++ AT+A+L++A+ F ++ + G G ISW +VW
Sbjct: 82 QAMTVNVRRGDDKVLPIVVLQNATVADLKKAIRHYFHLNLNRDGDGDRHISWRYVWKRNW 141
Query: 101 LCYNGQKLICENDNIKYYGI 120
L +NGQKL + +K YGI
Sbjct: 142 LYFNGQKLTEDKTLLKDYGI 161
>gi|183396439|gb|ACC62114.1| U11/U12 snRNP protein (predicted) [Rhinolophus ferrumequinum]
Length = 123
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISWP+VW + L
Sbjct: 30 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWPYVWRTYHL 89
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 90 TSAGEKLTEDRKKLRDYGIRNRDE 113
>gi|340371622|ref|XP_003384344.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Amphimedon queenslandica]
Length = 143
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 18/120 (15%)
Query: 6 MEEFSPRISVDSPRHSGALSLMIGGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVMKT 65
+++ SP IS+D + AL + + L+V+KLD + F + V++
Sbjct: 26 LKDLSPEISLDEVQSRLALE----------------QGRAMTLNVQKLDNTSFPVIVLQG 69
Query: 66 ATIAELRQAVE-AAFSHMPKTGPGK-ISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDG 123
AT+ ELR++VE + K G +SW +VW + L Y +L +D + YGI +
Sbjct: 70 ATVHELRKSVENETVRRLKKEGRTTFVSWGYVWKTYSLFYGQHRLSKLDDKLANYGISNN 129
>gi|291415424|ref|XP_002723952.1| PREDICTED: chromosome 16 open reading frame 33-like, partial
[Oryctolagus cuniculus]
Length = 174
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 81 QAMTVRVSKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHL 140
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 141 TSAGEKLTEDRKKLRDYGIRNRDE 164
>gi|62859759|ref|NP_001016702.1| uncharacterized protein LOC549456 [Xenopus (Silurana) tropicalis]
gi|60550970|gb|AAH91616.1| hypothetical protein LOC549456 [Xenopus (Silurana) tropicalis]
Length = 167
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K DG + V++ AT+ +L++A++ H + G ISW +VW + L
Sbjct: 74 QAMTVRVCKADGEIMPVVVVQNATVLDLKRAIQRYIQLKHQREGGIQHISWKYVWRTYHL 133
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
++G+KL ++ +++ YGI++ D+
Sbjct: 134 SFSGEKLEEDSRSLREYGIKNRDE 157
>gi|149496551|ref|XP_001514542.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like, partial [Ornithorhynchus anatinus]
Length = 109
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAA--FSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+D + V++ AT+ +L++A++ + + G ISW +VW + L
Sbjct: 16 QAMTVRVCKVDEEVIPVVVVQNATVLDLKKAIQRSVQLRQEREGGTQHISWSYVWRTYHL 75
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
+ G+KL + ++ YGIR+ DQ
Sbjct: 76 TFAGEKLTEDGKKLREYGIRNRDQ 99
>gi|89268289|emb|CAJ82445.1| novel protein [Xenopus (Silurana) tropicalis]
Length = 175
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K DG + V++ AT+ +L++A++ H + G ISW +VW + L
Sbjct: 82 QAMTVRVCKADGEIMPVVVVQNATVLDLKRAIQRYIQLKHQREGGIQHISWKYVWRTYHL 141
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
++G+KL ++ +++ YGI++ D+
Sbjct: 142 SFSGEKLEEDSRSLREYGIKNRDE 165
>gi|344292082|ref|XP_003417757.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Loxodonta africana]
Length = 171
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 78 QAMTVCVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYYL 137
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
+ G+KL + ++ YGIR+ D+
Sbjct: 138 TFVGEKLTEDRKKLRDYGIRNRDE 161
>gi|390471020|ref|XP_003734415.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Callithrix jacchus]
Length = 182
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V+++AT+ +L++A++ + G ISW +VW + L
Sbjct: 89 QAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHL 148
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 149 TSAGEKLTEDRKKLRDYGIRNRDE 172
>gi|355756392|gb|EHH60000.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
fascicularis]
Length = 132
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V+++AT+ +L++A++ + G ISW +VW + L
Sbjct: 39 QAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHL 98
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 99 TSAGEKLTEDKKKLRDYGIRNRDE 122
>gi|392351107|ref|XP_213260.4| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Rattus norvegicus]
Length = 182
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 89 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHL 148
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 149 TSAGEKLTEDRKKLRDYGIRNRDE 172
>gi|148227336|ref|NP_001083423.1| uncharacterized protein LOC398918 [Xenopus laevis]
gi|38014507|gb|AAH60402.1| MGC68520 protein [Xenopus laevis]
Length = 168
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K D + V++ AT+ +L++A++ H + G ISW +VW + L
Sbjct: 75 QAMTVRVCKEDEEIMPVVVVQNATVLDLKRAIQRYIQLKHQREGGIQHISWKYVWRTYHL 134
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
Y+G+KL E +++ YGI++ D+
Sbjct: 135 SYSGEKLDDEAKSLREYGIKNRDE 158
>gi|48427640|tpg|DAA05499.1| TPA_exp: U11/U12 snRNP 25K [Homo sapiens]
gi|123237049|emb|CAI95606.2| chromosome 16 open reading frame 33 [Homo sapiens]
gi|167427356|gb|ABZ80331.1| U11/U12 snRNP 25K protein (predicted) [Callithrix jacchus]
gi|169246091|gb|ACA51067.1| U11/U12 snRNP protein (predicted) [Callicebus moloch]
Length = 123
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V+++AT+ +L++A++ + G ISW +VW + L
Sbjct: 30 QAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHL 89
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 90 TSAGEKLTEDRKKLRDYGIRNRDE 113
>gi|281183133|ref|NP_001162284.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Papio
anubis]
gi|160904111|gb|ABX52098.1| chromosome 16 open reading frame 33 (predicted) [Papio anubis]
gi|355709782|gb|EHH31246.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
mulatta]
gi|380787573|gb|AFE65662.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
mulatta]
gi|383421593|gb|AFH34010.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
mulatta]
gi|384949440|gb|AFI38325.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
mulatta]
Length = 132
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V+++AT+ +L++A++ + G ISW +VW + L
Sbjct: 39 QAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHL 98
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 99 TSAGEKLTEDKKKLRDYGIRNRDE 122
>gi|13443018|ref|NP_078847.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Homo
sapiens]
gi|114660086|ref|XP_523242.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
isoform 3 [Pan troglodytes]
gi|395747207|ref|XP_003778569.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
isoform 1 [Pongo abelii]
gi|395747209|ref|XP_003778570.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
isoform 2 [Pongo abelii]
gi|397476070|ref|XP_003809434.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Pan paniscus]
gi|426380497|ref|XP_004056899.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Gorilla gorilla gorilla]
gi|426380503|ref|XP_004056902.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like isoform 1 [Gorilla gorilla gorilla]
gi|426380505|ref|XP_004056903.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like isoform 2 [Gorilla gorilla gorilla]
gi|68052377|sp|Q9BV90.1|CP033_HUMAN RecName: Full=U11/U12 small nuclear ribonucleoprotein 25 kDa
protein; Short=U11/U12 snRNP 25 kDa protein;
Short=U11/U12-25K; AltName: Full=Minus-99 protein
gi|14336677|gb|AAK61211.1|AE006462_3 Minus -99 protein [Homo sapiens]
gi|12655063|gb|AAH01381.1| Small nuclear ribonucleoprotein 25kDa (U11/U12) [Homo sapiens]
gi|14327922|gb|AAH09179.1| Small nuclear ribonucleoprotein 25kDa (U11/U12) [Homo sapiens]
gi|90653003|gb|ABD95904.1| U11/U12 snRNP 25 kDa protein [Homo sapiens]
gi|123982628|gb|ABM83055.1| chromosome 16 open reading frame 33 [synthetic construct]
gi|123983044|gb|ABM83263.1| chromosome 16 open reading frame 33 [synthetic construct]
gi|123997293|gb|ABM86248.1| chromosome 16 open reading frame 33 [synthetic construct]
gi|410222032|gb|JAA08235.1| small nuclear ribonucleoprotein 25kDa (U11/U12) [Pan troglodytes]
gi|410248962|gb|JAA12448.1| small nuclear ribonucleoprotein 25kDa (U11/U12) [Pan troglodytes]
gi|410304654|gb|JAA30927.1| small nuclear ribonucleoprotein 25kDa (U11/U12) [Pan troglodytes]
Length = 132
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V+++AT+ +L++A++ + G ISW +VW + L
Sbjct: 39 QAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHL 98
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 99 TSAGEKLTEDRKKLRDYGIRNRDE 122
>gi|297283095|ref|XP_001082002.2| PREDICTED: hypothetical protein LOC693295 [Macaca mulatta]
Length = 266
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V+++AT+ +L++A++ + G ISW +VW + L
Sbjct: 173 QAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHL 232
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 233 TSAGEKLTEDKKKLRDYGIRNRDE 256
>gi|338713072|ref|XP_001496673.3| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Equus caballus]
Length = 208
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 115 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHL 174
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 175 TSAGEKLTEDRKKLRDYGIRNRDE 198
>gi|301769555|ref|XP_002920234.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Ailuropoda melanoleuca]
Length = 204
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 111 QAMTVRVCKMDGEIMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYYL 170
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 171 TSAGEKLTEDRKKLRDYGIRNRDE 194
>gi|417408430|gb|JAA50766.1| Hypothetical protein, partial [Desmodus rotundus]
Length = 183
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 90 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHL 149
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 150 TSAGEKLTEDRKKLRDYGIRNRDE 173
>gi|10439480|dbj|BAB15505.1| unnamed protein product [Homo sapiens]
Length = 132
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V+++AT+ +L++A++ + G ISW +VW + L
Sbjct: 39 QAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHL 98
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 99 TSAGEKLAEDRKKLRDYGIRNRDE 122
>gi|410985647|ref|XP_003999130.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Felis catus]
Length = 180
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 87 QAMTVRVCKMDGEIMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYYL 146
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 147 TSAGEKLTEDRKKLRDYGIRNRDE 170
>gi|262118251|ref|NP_084369.2| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Mus
musculus]
gi|395835627|ref|XP_003790778.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Otolemur garnettii]
gi|68052366|sp|Q8VIK1.1|CP033_MOUSE RecName: Full=U11/U12 small nuclear ribonucleoprotein 25 kDa
protein; Short=U11/U12 snRNP 25 kDa protein
gi|16973675|gb|AAL32366.1| C16ORF33 [Mus musculus]
gi|20380350|gb|AAH28766.1| Small nuclear ribonucleoprotein 25 (U11/U12) [Mus musculus]
gi|148691820|gb|EDL23767.1| RIKEN cDNA 3300001G02, isoform CRA_d [Mus musculus]
gi|149052203|gb|EDM04020.1| similar to chromosome 16 open reading frame 33; minus -99 protein
(predicted), isoform CRA_b [Rattus norvegicus]
gi|195977134|gb|ACG63681.1| U11/U12 small nuclear ribonucleoprotein protein (predicted)
[Otolemur garnettii]
Length = 123
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 30 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHL 89
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 90 TSAGEKLTEDRKKLRDYGIRNRDE 113
>gi|403273560|ref|XP_003928576.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein,
partial [Saimiri boliviensis boliviensis]
Length = 200
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V+++AT+ +L++A++ + G ISW +VW + L
Sbjct: 107 QAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYMQLKQEREGGIQHISWSYVWRTYHL 166
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 167 TSAGEKLTEDRKKLRDYGIRNRDE 190
>gi|348584706|ref|XP_003478113.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Cavia porcellus]
Length = 156
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 63 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHL 122
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 123 TSAGEKLTEDRKKLRDYGIRNRDE 146
>gi|392332036|ref|XP_001062061.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Rattus norvegicus]
Length = 237
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 144 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHL 203
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 204 TSAGEKLTEDRKKLRDYGIRNRDE 227
>gi|12859665|dbj|BAB31728.1| unnamed protein product [Mus musculus]
Length = 123
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 30 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHL 89
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 90 TSAGEKLTEDRKKLRDYGIRNRDE 113
>gi|119606283|gb|EAW85877.1| chromosome 16 open reading frame 33, isoform CRA_a [Homo sapiens]
Length = 267
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V+++AT+ +L++A++ + G ISW +VW + L
Sbjct: 174 QAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHL 233
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 234 TSAGEKLTEDRKKLRDYGIRNRDE 257
>gi|355721010|gb|AES07123.1| small nuclear ribonucleoprotein 25kDa [Mustela putorius furo]
Length = 157
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 65 QAMTVRVCKMDGEIMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYYL 124
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 125 TSAGEKLTDDRKKLRDYGIRNRDE 148
>gi|226822865|gb|ACO83097.1| U11/U12 snRNP 25K protein (predicted) [Dasypus novemcinctus]
Length = 123
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 30 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGIQHISWAYVWRTYHL 89
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 90 TSAGEKLTEDRKKLRDYGIRNRDE 113
>gi|73959877|ref|XP_854401.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Canis lupus familiaris]
Length = 213
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 120 QAMTVRVCKMDGEIMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYYL 179
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 180 TSAGEKLTEDRKKLRDYGIRNRDE 203
>gi|426254135|ref|XP_004020740.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Ovis aries]
Length = 123
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 30 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHL 89
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 90 TSAGEKLTEDQKKLRDYGIRNRDE 113
>gi|18463966|gb|AAL73047.1| C16ORF33 [Sphoeroides nephelus]
Length = 109
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K DG I V++ AT+ +L++A+ + G +SW +VW + L
Sbjct: 16 QAMTVRVLKADGEVMPIVVVQNATVLDLKKAIRRFMELKQQREGGVKYVSWRYVWRTYHL 75
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
+ G+KL + +K YGI++ D+
Sbjct: 76 VFQGEKLEGDRMRLKDYGIKNRDE 99
>gi|262205517|ref|NP_001160084.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Bos taurus]
gi|160017307|sp|Q3ZBQ4.2|CP033_BOVIN RecName: Full=U11/U12 small nuclear ribonucleoprotein 25 kDa
protein; Short=U11/U12 snRNP 25 kDa protein
gi|296473635|tpg|DAA15750.1| TPA: U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Bos
taurus]
gi|431906773|gb|ELK10894.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Pteropus
alecto]
Length = 123
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 30 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHL 89
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 90 TSAGEKLTEDRKKLRDYGIRNRDE 113
>gi|148691819|gb|EDL23766.1| RIKEN cDNA 3300001G02, isoform CRA_c [Mus musculus]
Length = 123
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 30 QAMTVRVCKMDGEVTAVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHL 89
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 90 TSAGEKLTEDRKKLRDYGIRNRDE 113
>gi|351711231|gb|EHB14150.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Heterocephalus glaber]
Length = 169
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 76 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHL 135
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 136 TSAGEKLTEDRKKLRDYGIRNRDE 159
>gi|432098907|gb|ELK28397.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Myotis
davidii]
Length = 123
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 30 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHL 89
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 90 TSAGEKLTDDRKKLRDYGIRNRDE 113
>gi|395515604|ref|XP_003761991.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Sarcophilus harrisii]
Length = 168
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT +L++A++ + G ISW ++W + L
Sbjct: 75 QAMTVRVCKVDGEVMPVVVVQNATTLDLKKAIQRYVQLKQEREGGIQHISWSYIWRTYHL 134
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
+ G+KL + ++ YGIR+ D+
Sbjct: 135 TFAGEKLTEDAKKLREYGIRNRDE 158
>gi|73586763|gb|AAI03172.1| SNRNP25 protein [Bos taurus]
Length = 166
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 73 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHL 132
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 133 TSAGEKLTEDRKKLRDYGIRNRDE 156
>gi|126335357|ref|XP_001371960.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Monodelphis domestica]
Length = 175
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT +L++A++ + G ISW ++W + L
Sbjct: 82 QAMTVRVCKVDGEVMPVVVVQNATTLDLKKAIQRYVQLKQEREGGIQHISWSYIWRTYHL 141
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
+ G+KL + ++ YGIR+ D+
Sbjct: 142 TFAGEKLTEDGKKLREYGIRNRDE 165
>gi|339522115|gb|AEJ84222.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Capra
hircus]
Length = 123
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 30 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRREREGGIQHISWSYVWRTYHL 89
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 90 TSAGEKLTEDRKKLRDYGIRNRDE 113
>gi|354499600|ref|XP_003511896.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Cricetulus griseus]
Length = 169
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 76 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYMQLKQEREGGIQHISWSYVWRTYHL 135
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 136 TSAGEKLTEDRKKLRDYGIRNRDE 159
>gi|344254276|gb|EGW10380.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Cricetulus
griseus]
Length = 123
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 30 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYMQLKQEREGGIQHISWSYVWRTYHL 89
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 90 TSAGEKLTEDRKKLRDYGIRNRDE 113
>gi|226372070|gb|ACO51660.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Rana
catesbeiana]
Length = 123
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + ++V K D I V++ AT+ +L++A++ H + G +SW +VW + L
Sbjct: 30 QAMTVNVCKADKDIMPIVVVQNATVLDLKRAIQRYIQLKHQREGGIQHVSWKYVWRTYYL 89
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
+ G+KL + +++ YGI++ D+
Sbjct: 90 AFAGEKLDRDEKSLREYGIKNRDE 113
>gi|335308396|ref|XP_003361215.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like, partial [Sus scrofa]
Length = 109
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 16 QAMTVRVCKTDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGVQHISWSYVWRTYHL 75
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 76 MAAGEKLTEDRKKLRDYGIRNRDE 99
>gi|440913470|gb|ELR62920.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein, partial
[Bos grunniens mutus]
Length = 199
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 106 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHL 165
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 166 TSAGEKLTEDRKKLRDYGIRNRDE 189
>gi|363739485|ref|XP_423619.3| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Gallus gallus]
Length = 200
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K DG + V++ A++ +L++A+ + G +SW ++W + L
Sbjct: 108 QAMTVRVCKADGESMPVVVVQNASVLDLKKALRRHVQLRQARRGGVQHLSWKYIWRTYHL 167
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
Y G+KL + ++ YGIR+ D+
Sbjct: 168 TYAGEKLADDRKKLREYGIRNRDE 191
>gi|335284777|ref|XP_003124710.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like, partial [Sus scrofa]
Length = 134
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 41 QAMTVRVCKTDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGVQHISWSYVWRTYHL 100
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 101 MAAGEKLTEDRKKLRDYGIRNRDE 124
>gi|213510978|ref|NP_001134941.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Salmo
salar]
gi|209737428|gb|ACI69583.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Salmo
salar]
Length = 188
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K DG I V++ A + +L++A++ G +SW +VW F L
Sbjct: 95 QAMTVRVCKADGEVMPIVVVQNAMVLDLKKAIQRFMELKQQRVGGVKHVSWRYVWRTFHL 154
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
+ G+KL + +K YGIR+ D+
Sbjct: 155 VFQGEKLDDDKMKLKDYGIRNRDE 178
>gi|410902817|ref|XP_003964890.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Takifugu rubripes]
Length = 183
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K DG I V++ AT+ +L++A+ + G +SW +VW F L
Sbjct: 90 QAMTVKVLKADGEVMPIVVVQNATVLDLKKAIRRFMELKQQREGGVKCVSWRYVWRTFNL 149
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
+ G+KL + ++ YGI++ D+
Sbjct: 150 VFQGEKLEDDRMRLRDYGIKNRDE 173
>gi|47220063|emb|CAG12211.1| unnamed protein product [Tetraodon nigroviridis]
Length = 188
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K DG I V++ AT+ +L++A+ + G +SW +VW + L
Sbjct: 95 QAMTVRVLKADGEVMPIVVVQNATVLDLKKAIRRFMELKQQREGGVKYVSWRYVWRTYHL 154
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
+ G+KL + +K YGI++ D+
Sbjct: 155 VFQGEKLEDDRMRLKDYGIKNRDE 178
>gi|432868044|ref|XP_004071383.1| PREDICTED: LOW QUALITY PROTEIN: U11/U12 small nuclear
ribonucleoprotein 25 kDa protein-like [Oryzias latipes]
Length = 180
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + K DG I V++ AT+ +L++A+ + G +SW +VW + L
Sbjct: 87 QAMTVKXCKADGEIMPIVVVQNATVLDLKKAIRRFMELKQQREGGVKHVSWRYVWRTYYL 146
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
+ G+KL ++ +K YGIR+ D+
Sbjct: 147 VFQGEKLEDDSIRLKDYGIRNRDE 170
>gi|159163176|pdb|1V2Y|A Chain A, Solution Structure Of Mouse Hypothetical Gene (Riken Cdna
3300001g02) Product Homologous To Ubiquitin Fold
Length = 105
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCLCY 103
+ + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 8 MTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLTS 67
Query: 104 NGQKLICENDNIKYYGIRDGDQ 125
G+KL + ++ YGIR+ D+
Sbjct: 68 AGEKLTEDRKKLRDYGIRNRDE 89
>gi|339238065|ref|XP_003380587.1| putative STAS domain protein [Trichinella spiralis]
gi|316976515|gb|EFV59800.1| putative STAS domain protein [Trichinella spiralis]
Length = 900
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 41 LPEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSH--MPKTGPGKISWPHVWGH 98
L LK+ +R+ DG +I++ K AT+ EL++ ++ FS ++ I+W +VW
Sbjct: 689 LQNGSLKIFIRRFDGKTIEIDIDKNATVKELKKVIQRTFSRKLYNESSIKHINWAYVWRT 748
Query: 99 FCLCYNGQKL 108
+ L +N QKL
Sbjct: 749 YWLRFNQQKL 758
>gi|156365484|ref|XP_001626675.1| predicted protein [Nematostella vectensis]
gi|156213561|gb|EDO34575.1| predicted protein [Nematostella vectensis]
Length = 154
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 48 LSVRKLD--GSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCLCY 103
++VR+ D + + V++ AT+ +L++A++ + G ISW +VW F L +
Sbjct: 63 VNVRQQDKMATILPVVVVQDATVLDLKKAIQRHITLKQTREGGATYISWKYVWRTFWLMF 122
Query: 104 NGQKLICENDNIKYYGIRDGDQ 125
GQKL ++ ++K YGI D+
Sbjct: 123 EGQKLSDDHKSLKEYGISSRDE 144
>gi|348509153|ref|XP_003442116.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Oreochromis niloticus]
Length = 187
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPG---KISWPHVWGHFC 100
Q + + V K D I V++ AT+ +L++A+ F + + G ISW +VW +
Sbjct: 94 QAMTVRVLKADSEVMPIVVVQNATVLDLKKAI-CRFMELKQQREGGVKHISWRYVWRTYH 152
Query: 101 LCYNGQKLICENDNIKYYGIRDGDQ 125
L + G+KL + +K YGIR+ D+
Sbjct: 153 LVFQGEKLEDDKMRLKDYGIRNRDE 177
>gi|383858160|ref|XP_003704570.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Megachile rotundata]
Length = 182
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 65 TATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGI 120
++ L++A++ S + KISW HVW + LC++ KL+ +N+NIK YGI
Sbjct: 103 NTSVLNLKKAIKRHTNLSLKRENVKKKISWKHVWKKYYLCFDNVKLVNDNENIKAYGI 160
>gi|327289177|ref|XP_003229301.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Anolis carolinensis]
Length = 151
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 44 QPLKLSVRKLDG--SCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHF 99
Q + + VR+ D + + V++ A++ +L++A+ + G ISW ++W +
Sbjct: 57 QAMTVRVRRADAPEAPLPVVVVQNASVLDLKRALRRFVQLRQEREGGIQHISWRYLWRTY 116
Query: 100 CLCYNGQKLICENDNIKYYGIRDGDQ 125
CL + G+KL + ++ YGIR+ D+
Sbjct: 117 CLTFGGEKLTDDRKKLREYGIRNRDE 142
>gi|340722517|ref|XP_003399651.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Bombus terrestris]
Length = 180
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 66 ATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRD 122
T+ +L++A++ S + KISW H+W + LC+ +LI +N+NIK YGI +
Sbjct: 102 TTVLDLKKAIKRHTNLSLKREKVKKKISWKHIWKKYHLCFENVRLINDNENIKAYGITN 160
>gi|328782996|ref|XP_003250223.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Apis mellifera]
Length = 175
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 66 ATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRD 122
T+ +L++A++ + + KISW H+W + LC+ KLI +N+NIK YGI +
Sbjct: 97 TTVLDLKKAIKRHTNLALKREKIKKKISWKHIWKKYHLCFENIKLINDNENIKTYGITN 155
>gi|350418490|ref|XP_003491874.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Bombus impatiens]
Length = 180
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 66 ATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGI 120
T+ +L++A++ S + KISW H+W + LC+ +LI +N+NIK YGI
Sbjct: 102 TTVLDLKKAIKRHTNLSLKREKVKKKISWKHIWKKYHLCFENVRLIDDNENIKAYGI 158
>gi|395853139|ref|XP_003799074.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Otolemur garnettii]
Length = 194
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 101 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHL 160
Query: 102 CYNGQKLICENDNIKYYGIRD 122
G+ L + ++ YGIR+
Sbjct: 161 TSAGEMLTEDRKKLRDYGIRN 181
>gi|427786405|gb|JAA58654.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 168
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFS-HMPKTGPGKI-SWPHVWGHFCL 101
Q + L V K +G + + V + AT+ +L++A+ + M + G ++ SW +VW + L
Sbjct: 75 QAMSLVVHKANGDYYTVVVEQKATVLDLKKAIRRHVTLRMARKGVKRVLSWKYVWKTYWL 134
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
++G+ L + ++ +GIR+ Q
Sbjct: 135 SFDGELLKEDKALLRDFGIRNNSQ 158
>gi|325189533|emb|CCA24020.1| AlNc14C218G9051 [Albugo laibachii Nc14]
Length = 106
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 42 PEQPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKISWPHVWGHFCL 101
P + L+L ++ LDGSC D+ + + + +LRQ ++ + ++ G +ISW ++W +F +
Sbjct: 3 PHKALQLRIQCLDGSCIDVAIPRKCSFYQLRQLLQ--YQYVGDGGKRQISWRYIWKNFSI 60
Query: 102 CYNGQKLI------CENDNIKYYGIRDG 123
+ C N + +G++ G
Sbjct: 61 RSDTSDQFEVLFANCSNKIVTKFGVQTG 88
>gi|307200838|gb|EFN80891.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Harpegnathos saltator]
Length = 177
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 66 ATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGI 120
T+ +L++A++ + S + KISW H+W + LC+ KL N+NIK YGI
Sbjct: 100 TTVLDLKKAIKRHMSLSLKRENIKKKISWKHIWKKYHLCFEHIKLANNNENIKTYGI 156
>gi|332021112|gb|EGI61499.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Acromyrmex
echinatior]
Length = 176
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 66 ATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGI 120
T+ +L++A++ S + KISW HVW + LC+ +L +N+NIK YGI
Sbjct: 99 TTVLDLKKAIKRHTNLSLKRENVKKKISWKHVWKKYHLCFGDIRLSNDNENIKAYGI 155
>gi|405977277|gb|EKC41736.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Crassostrea
gigas]
Length = 171
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGK--ISWPHVWGHFCL 101
Q + ++V++ DG + V++ T+ +L+ A++ + GK ISW ++W + L
Sbjct: 96 QAMLVNVQRADGEVLSVVVVQNGTVLDLKHAIKRHMTLKLSRSKGKKHISWKYIWKRYWL 155
Query: 102 CYNGQKLICENDNIK 116
+ GQKL + +K
Sbjct: 156 YFEGQKLTEDKKQLK 170
>gi|346473065|gb|AEO36377.1| hypothetical protein [Amblyomma maculatum]
Length = 171
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFS-HMPKTGPGKI-SWPHVWGHFCL 101
Q + L V K D + + V + AT+ +L++A+ + M + G ++ SW +VW + L
Sbjct: 78 QAMSLVVHKADNDYYTVVVEQKATVLDLKKALRRHVTLRMARKGVKRVLSWKYVWKTYWL 137
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
+ G+ L + ++ +GIR+ Q
Sbjct: 138 SFEGELLRDDKALLRDFGIRNNSQ 161
>gi|241163699|ref|XP_002409330.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein, putative
[Ixodes scapularis]
gi|215494528|gb|EEC04169.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein, putative
[Ixodes scapularis]
Length = 136
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEA-AFSHMPKTGPGKI-SWPHVWGHFCL 101
Q + L V + DG + + V + ATI +L++A++ A M + G ++ SW ++W + L
Sbjct: 43 QAMSLRVLRADGDPYTVVVEQKATILDLKKALQRHATLRMARKGVKRVVSWRYIWKTYWL 102
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
+ GQ L + ++ GIR+ +
Sbjct: 103 SFEGQPLNQDRTLLRDTGIRNNSE 126
>gi|307182451|gb|EFN69686.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Camponotus
floridanus]
Length = 184
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 66 ATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGI 120
T+ +L++A++ S + KISW HVW + LC+ +L +N+NIK Y I
Sbjct: 106 TTVLDLKKAIKRHMNLSLKREDVKKKISWKHVWKKYHLCFEDIRLSNDNENIKAYNI 162
>gi|442756633|gb|JAA70475.1| Putative cytochrome c oxidase subunit cox19 [Ixodes ricinus]
Length = 164
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEA-AFSHMPKTGPGKI-SWPHVWGHFCL 101
Q + L V + DG + + V + AT+ +L++A++ A M + G ++ SW ++W + L
Sbjct: 71 QAMSLRVLRADGDPYTVVVEQKATVLDLKKALQRHATLRMARKGVKRVVSWRYIWRTYWL 130
Query: 102 CYNGQKLICENDNIKYYGIRDGDQ 125
+ GQ L + ++ GIR+ +
Sbjct: 131 SFEGQPLNQDRTLLRDAGIRNNSE 154
>gi|321459551|gb|EFX70603.1| hypothetical protein DAPPUDRAFT_231603 [Daphnia pulex]
Length = 207
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAA----FSHMPKTGPGKISWPHVWGHF 99
Q + + + + DG+ + + + AT+ +L++AVE A S +I+W +VW +
Sbjct: 112 QAIHVEIHREDGTSLPVIIRQNATVGQLKRAVERATELSLSRDANQRQRRINWKYVWKTY 171
Query: 100 CLCYNGQKLICENDNIKYYGIRDGD 124
L +G KL + IK + +GD
Sbjct: 172 WLYAHGAKLKDDMATIKDCALSNGD 196
>gi|156545358|ref|XP_001606078.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Nasonia vitripennis]
Length = 171
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 64 KTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIR 121
K ++ EL++AV+ + + KISW HVW + L ++ L + ++I+ YGIR
Sbjct: 94 KNTSVLELKKAVKRHTNLALKREKVTKKISWKHVWKKYYLSFDNVTLADDKEDIRNYGIR 153
>gi|444727238|gb|ELW67739.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Tupaia
chinensis]
Length = 131
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVE--AAFSHMPKTGPGKISWPHVWGHFCL 101
Q + + V K+DG + V++ AT+ +L++A++ + G ISW +VW + L
Sbjct: 30 QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRHVQLKQEREGGTQHISWSYVWRTYHL 89
Query: 102 CYNGQKLICENDNIK 116
G+KL + ++
Sbjct: 90 TSAGEKLTEDRKKLR 104
>gi|440795556|gb|ELR16676.1| hypothetical protein ACA1_089240 [Acanthamoeba castellanii str.
Neff]
Length = 185
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMP--KTGPGK-ISWPHVWGHFC 100
+ + V K DG + V T + EL++ ++ H + GP + I+W HVW C
Sbjct: 73 EAFSIYVLKHDGKRIPLVVTYTTMLDELKRQLQLVVDHQTAERLGPTRRINWKHVWDRQC 132
Query: 101 LCYNGQKLI 109
L Y G++L+
Sbjct: 133 LMYEGRRLL 141
>gi|320587509|gb|EFW99989.1| pre-mRNA splicing factor [Grosmannia clavigera kw1407]
Length = 2497
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Query: 11 PRISVDSPRHSGALSLMIGGFSRKNFS-YNKLPEQPLKLSVRKLDGSCFDIEVMKTATIA 69
PRI+ + LS G +R F Y + P + ++ DG +++ +T I
Sbjct: 1427 PRINTLFQKDRSTLSFDKGFRARAEFKIYQLMKSNPFWWTSQRHDGKLWNLNAYRTDVIQ 1486
Query: 70 ELRQAVEAAFSHMPKTGPGKISWPHV-WGHFCLCYNGQKLICENDNIKYYGIRDGD 124
L VE H G SW + W CL Y L + ++ +RDGD
Sbjct: 1487 AL-GGVETILEHCLFKATGFDSWEGLFWEKACLAYGTMLLRYDGSRVRVEDVRDGD 1541
>gi|196010539|ref|XP_002115134.1| hypothetical protein TRIADDRAFT_58967 [Trichoplax adhaerens]
gi|190582517|gb|EDV22590.1| hypothetical protein TRIADDRAFT_58967 [Trichoplax adhaerens]
Length = 154
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 64 KTATIAELRQAVE-AAFSHMPKTGPGK-ISWPHVWGHFCLCYNGQKLICENDNIKYYGIR 121
+TATI + ++A + H+ + G + I+W + W + L Y G KL ++ N+ YGI
Sbjct: 71 QTATIKQFKKAFQRQTLLHLKRKGESRRINWKYYWKSYWLIYEGIKLEKDDSNLIDYGIG 130
Query: 122 DG 123
+G
Sbjct: 131 NG 132
>gi|453086760|gb|EMF14802.1| pre-mRNA splicing factor [Mycosphaerella populorum SO2202]
Length = 2852
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
Query: 11 PRISVDSPRHSGALSLMIGGFSRKNFS-YNKLPEQPLKLSVRKLDGSCFDIEVMKTATIA 69
PRI+ + LS G +R F Y + P + ++ DG +++ +T I
Sbjct: 1446 PRINTLFQKDRSTLSFDKGFRARTEFKLYQHMKSNPFWWTSQRHDGKLWNLNAYRTDVIQ 1505
Query: 70 ELRQAVEAAFSHMPKTGPGKISWPHV-WGHFCLCYNGQKLICENDNIKYYGIRDGD 124
L VE H SW + W CL + + L ++ +K ++DGD
Sbjct: 1506 AL-GGVETILEHTLFKATAFPSWEGLFWEKACLAFGTEVLRLDHSRVKVEDVKDGD 1560
>gi|449475763|ref|XP_004176691.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Taeniopygia guttata]
Length = 76
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 86 GPGKISWPHVWGHFCLCYNGQKLICENDNIKYYGIRDGDQ 125
G +SW ++W + L YNG+KL + ++ YGIR+ D+
Sbjct: 28 GLQHLSWRYIWRTYHLTYNGEKLADDRKKLREYGIRNRDE 67
>gi|330793491|ref|XP_003284817.1| hypothetical protein DICPUDRAFT_53205 [Dictyostelium purpureum]
gi|325085213|gb|EGC38624.1| hypothetical protein DICPUDRAFT_53205 [Dictyostelium purpureum]
Length = 794
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 14/78 (17%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPGKISWPHVWGHFCLCYNG 105
+K++++KLDGS +++EV TI EL+Q ++ A S +P I V Y G
Sbjct: 1 MKINIKKLDGSVYNLEVTPETTIPELKQLIQDA-SSVP------IPLQRV------IYKG 47
Query: 106 QKLICENDNIKYYGIRDG 123
+ L E D +++Y I DG
Sbjct: 48 KYLRDEKD-LQFYKIEDG 64
>gi|357473837|ref|XP_003607203.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
gi|355508258|gb|AES89400.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
Length = 104
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 46 LKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFSHMPKTGPG--KISW 92
++++V KLD + FD+ +M TAT+ +L+ A++ ++M ++ G ISW
Sbjct: 50 MRITVLKLDTTSFDVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISW 98
>gi|357604352|gb|EHJ64146.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Danaus
plexippus]
Length = 150
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 44 QPLKLSVRKLDGSCFDIEVMKTATIAELRQAVEAAFS-HMPKTGPG-KISWPHVWGHFCL 101
Q + + V + D + V + +T+ EL++AV F + + G KISW ++W + L
Sbjct: 56 QSITVIVSREDEQPLKVIVPQNSTVRELKKAVARHFELYQQRMGNRVKISWRYIWKTYSL 115
Query: 102 CYNGQKLICENDNIKYYGI 120
Y+ L ++ I YG+
Sbjct: 116 NYDSLTLDKDDSKITDYGV 134
>gi|375011303|ref|YP_004988291.1| peroxiredoxin [Owenweeksia hongkongensis DSM 17368]
gi|359347227|gb|AEV31646.1| Peroxiredoxin [Owenweeksia hongkongensis DSM 17368]
Length = 413
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 19 RHSGALSLMIGGFSRKNFSYNKLPEQPLKLSVRKLDGSCFDIEVM 63
R++ +L+ + G+S+ +FS+N L +P LS K DG +++M
Sbjct: 238 RNADSLTYLKAGYSKVDFSFNNLKGEPASLSDPKYDGKPVIVQIM 282
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,009,371,191
Number of Sequences: 23463169
Number of extensions: 70729919
Number of successful extensions: 140576
Number of sequences better than 100.0: 156
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 140380
Number of HSP's gapped (non-prelim): 157
length of query: 125
length of database: 8,064,228,071
effective HSP length: 91
effective length of query: 34
effective length of database: 5,929,079,692
effective search space: 201588709528
effective search space used: 201588709528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)