Query 048547
Match_columns 164
No_of_seqs 144 out of 710
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 18:19:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048547.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048547hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m00_A Aristolochene synthase; 100.0 1.3E-38 4.5E-43 288.0 10.1 114 47-164 11-125 (550)
2 3g4d_A (+)-delta-cadinene synt 100.0 2.6E-37 8.8E-42 279.7 10.7 113 48-164 17-130 (554)
3 3n0f_A Isoprene synthase; terp 100.0 2E-37 6.7E-42 280.6 8.0 113 52-164 14-127 (555)
4 2ong_A 4S-limonene synthase; m 100.0 9.4E-37 3.2E-41 275.5 10.5 112 53-164 2-117 (543)
5 1n1b_A (+)-bornyl diphosphate 100.0 6.2E-37 2.1E-41 277.1 7.4 115 50-164 3-120 (549)
6 2j5c_A 1,8-cineole synthase; t 100.0 8.6E-37 2.9E-41 277.2 7.2 113 49-164 31-144 (569)
7 3pya_A ENT-copalyl diphosphate 100.0 2.7E-35 9.2E-40 273.1 10.1 130 6-164 174-314 (727)
8 3s9v_A Abietadiene synthase, c 100.0 3.7E-35 1.3E-39 274.3 10.0 132 6-164 198-339 (785)
9 3sdr_A Alpha-bisabolene syntha 100.0 2.4E-35 8.1E-40 276.6 7.8 132 6-164 226-367 (817)
10 3p5p_A Taxadiene synthase; cla 100.0 4.1E-35 1.4E-39 273.4 7.2 133 5-164 173-315 (764)
11 3sdr_A Alpha-bisabolene syntha 97.9 3E-06 1E-10 79.9 1.5 49 48-96 20-68 (817)
12 1pd3_A Nonstructural protein N 71.6 3.3 0.00011 26.1 2.8 33 82-114 16-48 (58)
13 1fi6_A EH domain protein REPS1 67.2 21 0.00071 23.2 6.5 59 99-164 23-83 (92)
14 1c07_A Protein (epidermal grow 59.0 34 0.0012 22.3 8.3 59 99-163 24-84 (95)
15 1qjt_A EH1, epidermal growth f 49.0 55 0.0019 21.6 7.0 58 99-163 25-84 (99)
16 1eh2_A EPS15; calcium binding, 43.3 74 0.0025 21.5 7.4 59 99-164 28-88 (106)
17 2guk_A Hypothetical protein PG 42.8 24 0.00081 25.6 3.5 42 80-121 16-57 (120)
18 3s9v_A Abietadiene synthase, c 39.1 8.2 0.00028 36.2 0.7 39 57-95 5-44 (785)
19 2jq6_A EH domain-containing pr 37.9 1.1E+02 0.0038 22.0 6.7 59 99-164 64-124 (139)
20 3vmx_A Voltage-gated hydrogen 33.3 15 0.00051 22.5 1.0 8 153-160 39-46 (48)
21 1b0n_B Protein (SINI protein); 32.7 41 0.0014 21.1 3.1 28 100-130 11-38 (57)
22 3a2a_A Voltage-gated hydrogen 30.9 15 0.00051 23.2 0.7 8 153-160 46-53 (58)
23 3fia_A Intersectin-1; EH 1 dom 23.1 2E+02 0.0069 20.3 7.8 59 99-164 46-106 (121)
24 1q08_A Zn(II)-responsive regul 22.3 66 0.0023 21.1 2.9 27 102-131 3-29 (99)
25 1iq3_A Ralbp1-interacting prot 21.2 40 0.0014 22.9 1.6 59 99-164 36-96 (110)
26 3zyq_A Hepatocyte growth facto 21.2 65 0.0022 25.0 3.0 21 143-163 124-144 (226)
27 1x5b_A Signal transducing adap 20.0 1.1E+02 0.0038 22.6 4.0 21 143-163 131-151 (163)
No 1
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=100.00 E-value=1.3e-38 Score=287.96 Aligned_cols=114 Identities=38% Similarity=0.672 Sum_probs=100.4
Q ss_pred ccccccCCCCCCCCCCCcccccccCCCCCchHHHHHHHHHHHHHhcccccc-cccccchhhHHHHHHHhCcccchHHHHH
Q 048547 47 DNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRREEELKGKVMTTIKD-VTEPLNQLELIDSLQRLGLAYHFETEIR 125 (164)
Q Consensus 47 ~~~~~~r~~a~~~PsiW~~~fl~sl~~~~~~~~~~~~~e~LKeeVr~ml~~-~~d~~e~L~lID~LQRLGIsyhFe~EI~ 125 (164)
+.+++.||+|+|+||+|||+|++++.+++..+.+.+++++||++||+||.. ..+++++|+|||+||||||+|||++||+
T Consensus 11 ~~~~~~R~~~~~~ps~W~d~fl~~~~~~~~~~~~~~~~e~Lk~eVr~~l~~~~~~~~~~L~lID~lqrLGi~~hF~~EI~ 90 (550)
T 3m00_A 11 YEEEIVRPVADFSPSLWGDQFLSFSIKNQVAEKYAKEIEALKEQTRNMLLATGMKLADTLNLIDTIERLGISYHFEKEID 90 (550)
T ss_dssp -----CCCCCCCCCCTTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTTCGGGCHHHHH
T ss_pred cccccCCCCCCCCcccccccccccCCcchhhHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHcCchhhhHHHHH
Confidence 456678999999999999999998766556777899999999999999975 4789999999999999999999999999
Q ss_pred HHHHHHHhccCCcCCCCCChHHHHHHHHHhhhCCCCCCC
Q 048547 126 NILHDIYNSNNDYVWRKENLYATSLEFRLLRQHGYPVSQ 164 (164)
Q Consensus 126 ~~L~~i~~~~~~~~~~~~DL~~~AL~FRLLRqhGY~VS~ 164 (164)
++|++||+.|.. ..|||+|||+|||||||||+|||
T Consensus 91 ~~L~~i~~~~~~----~~dl~~~al~FRLLR~hGy~VS~ 125 (550)
T 3m00_A 91 DILDQIYNQNSN----CNDLCTSALQFRLLRQHGFNISP 125 (550)
T ss_dssp HHHHHHHHHCCC----CSSHHHHHHHHHHHHHTTCCCCG
T ss_pred HHHHHHHHhccc----CCCHHHHHHHHHHHHhcCCCCCh
Confidence 999999988754 37999999999999999999996
No 2
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=100.00 E-value=2.6e-37 Score=279.75 Aligned_cols=113 Identities=42% Similarity=0.708 Sum_probs=92.8
Q ss_pred cccccCCCCCCCCCCCcccccccCCCCCchHHHHHHHHHHHHHhcccccc-cccccchhhHHHHHHHhCcccchHHHHHH
Q 048547 48 NLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRREEELKGKVMTTIKD-VTEPLNQLELIDSLQRLGLAYHFETEIRN 126 (164)
Q Consensus 48 ~~~~~r~~a~~~PsiW~~~fl~sl~~~~~~~~~~~~~e~LKeeVr~ml~~-~~d~~e~L~lID~LQRLGIsyhFe~EI~~ 126 (164)
..++.||++||+||+|||+|+++ .+++..+.+.+++++||++||+||.. ..|++++|+|||+||||||+|||++||++
T Consensus 17 ~~~~~R~~~~~~ps~W~~~fl~~-~~~~~~~~~~~~~e~Lk~eVr~~l~~~~~~~~~~l~lID~lqrLGi~~hF~~EI~~ 95 (554)
T 3g4d_A 17 NKDEMRPKADFQPSIWGDLFLNC-PDKNIDAETEKRHQQLKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIED 95 (554)
T ss_dssp --------CCCCCCTTTTTTTSC-CC---CHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHHTTCGGGCHHHHHH
T ss_pred cCCCCCCCCCCCccccccccccC-CCchhhHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHcCchhhhHHHHHH
Confidence 35568999999999999999998 66666788999999999999999975 47999999999999999999999999999
Q ss_pred HHHHHHhccCCcCCCCCChHHHHHHHHHhhhCCCCCCC
Q 048547 127 ILHDIYNSNNDYVWRKENLYATSLEFRLLRQHGYPVSQ 164 (164)
Q Consensus 127 ~L~~i~~~~~~~~~~~~DL~~~AL~FRLLRqhGY~VS~ 164 (164)
+|++||+. .. ....|||+|||+|||||||||+|||
T Consensus 96 ~L~~i~~~-~~--~~~~dl~~~al~FRlLR~hGy~VS~ 130 (554)
T 3g4d_A 96 ELENIYHN-NN--DAENDLYTTSIRFRLLREHGYNVSC 130 (554)
T ss_dssp HHHHHHHS-CC--CTTCCHHHHHHHHHHHHHTTCCCCG
T ss_pred HHHHHHhc-cC--CCCCCHHHHHHHHHHHHhcCCCCCh
Confidence 99999975 21 1226999999999999999999996
No 3
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=100.00 E-value=2e-37 Score=280.59 Aligned_cols=113 Identities=47% Similarity=0.707 Sum_probs=93.4
Q ss_pred cCCCCCCCCCCCcccccccCCCCCchHHHHHHHHHHHHHhcccccccc-cccchhhHHHHHHHhCcccchHHHHHHHHHH
Q 048547 52 DRRSANYQPSIWDHDFLQSLNSNYTDETYKRREEELKGKVMTTIKDVT-EPLNQLELIDSLQRLGLAYHFETEIRNILHD 130 (164)
Q Consensus 52 ~r~~a~~~PsiW~~~fl~sl~~~~~~~~~~~~~e~LKeeVr~ml~~~~-d~~e~L~lID~LQRLGIsyhFe~EI~~~L~~ 130 (164)
.|++|||+||+|||+|++++.+++..+.+.+++++||++||+||.... +++++|+|||+||||||+|||++||+++|++
T Consensus 14 ~~~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~e~Lk~eVr~~l~~~~~~~~~~L~lID~lqRLGi~~hF~~EI~~~L~~ 93 (555)
T 3n0f_A 14 ARRSADYEPNSWDYDFLLSSDTDESIEVYKDKAKKLEAEVRREINNEKAEFLTLLELIDNVQRLGLGYRFESDIRRALDR 93 (555)
T ss_dssp ---CCCCCCCTTCHHHHTCC-----CHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTTCGGGSHHHHHHHHHH
T ss_pred cCCCCCCCcccccccccccCCcchhhHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHcCchhhhHHHHHHHHHH
Confidence 588999999999999999877666778899999999999999997556 8999999999999999999999999999999
Q ss_pred HHhccCCcCCCCCChHHHHHHHHHhhhCCCCCCC
Q 048547 131 IYNSNNDYVWRKENLYATSLEFRLLRQHGYPVSQ 164 (164)
Q Consensus 131 i~~~~~~~~~~~~DL~~~AL~FRLLRqhGY~VS~ 164 (164)
||+......+...|||+|||+|||||||||+|||
T Consensus 94 i~~~~~~~~~~~~DL~~~Al~FRLLR~hGy~VS~ 127 (555)
T 3n0f_A 94 FVSSGGFDGVTKTSLHATALSFRLLRQHGFEVSQ 127 (555)
T ss_dssp HHHTCHHHHHTTTCHHHHHHHHHHHHHTTCCCCG
T ss_pred HHhhccccccccCCHHHHHHHHHHHHhcCCCcCh
Confidence 9974110011237999999999999999999996
No 4
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=100.00 E-value=9.4e-37 Score=275.52 Aligned_cols=112 Identities=47% Similarity=0.788 Sum_probs=100.4
Q ss_pred CCCCCCCCCCCcccccccCCCCCchHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHhCcccchHHHHHHHHHHHH
Q 048547 53 RRSANYQPSIWDHDFLQSLNSNYTDETYKRREEELKGKVMTTIKDVTEPLNQLELIDSLQRLGLAYHFETEIRNILHDIY 132 (164)
Q Consensus 53 r~~a~~~PsiW~~~fl~sl~~~~~~~~~~~~~e~LKeeVr~ml~~~~d~~e~L~lID~LQRLGIsyhFe~EI~~~L~~i~ 132 (164)
||+++|+||+||++|++++.+.+..+.+.+++++||++||+|+.+..|++++|+|||+||||||+|||++||+++|++||
T Consensus 2 r~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~~~Lk~~V~~~~~~~~d~~~~l~liD~lqrLGi~~hF~~EI~~~L~~i~ 81 (543)
T 2ong_A 2 RRSGNYNPSRWDVNFIQSLLSDYKEDKHVIRASELVTLVKMELEKETDQIRQLELIDDLQRMGLSDHFQNEFKEILSSIY 81 (543)
T ss_dssp CCCCCCCCCSSCHHHHHHCCCSSCSTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTGGGTTHHHHHHHHHHHH
T ss_pred CCCCCCCCCcCCcccccCCCchhhhhHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCchhhhHHHHHHHHHHHH
Confidence 88999999999999999876666667889999999999999998767999999999999999999999999999999999
Q ss_pred hccCCcC-C--C-CCChHHHHHHHHHhhhCCCCCCC
Q 048547 133 NSNNDYV-W--R-KENLYATSLEFRLLRQHGYPVSQ 164 (164)
Q Consensus 133 ~~~~~~~-~--~-~~DL~~~AL~FRLLRqhGY~VS~ 164 (164)
+.|.... | . ..|||+|||+|||||||||+|||
T Consensus 82 ~~~~~~~~~~~~~~~dl~~~al~FRlLR~hGy~vs~ 117 (543)
T 2ong_A 82 LDHHYYKNPFPKEERDLYSTSLAFRLLREHGFQVAQ 117 (543)
T ss_dssp HTTTCCCSSCCCCCCCHHHHHHHHHHHHHTTCCCCG
T ss_pred HhhcccccccccccCCHHHHHHHHHHHHHcCCCccH
Confidence 8764311 1 1 36999999999999999999996
No 5
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=100.00 E-value=6.2e-37 Score=277.08 Aligned_cols=115 Identities=48% Similarity=0.756 Sum_probs=90.6
Q ss_pred cccCCCCCCCCCCCcccccccCCCCCchHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHhCcccchHHHHHHHHH
Q 048547 50 TVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRREEELKGKVMTTIKDVTEPLNQLELIDSLQRLGLAYHFETEIRNILH 129 (164)
Q Consensus 50 ~~~r~~a~~~PsiW~~~fl~sl~~~~~~~~~~~~~e~LKeeVr~ml~~~~d~~e~L~lID~LQRLGIsyhFe~EI~~~L~ 129 (164)
.+.||+++|+||+||++|++++.+.+..+.+.+++++||++||+|+.+..|++++|+|||+||||||+|||++||+++|+
T Consensus 3 ~~~r~~~~~~ps~W~~~fl~s~~~~~~~~~~~~~~~~Lk~~V~~~~~~~~d~~~~l~lvD~lqrLGi~~hF~~EI~~~L~ 82 (549)
T 1n1b_A 3 HQIRRSGNYQPALWDSNYIQSLNTPYTEERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILG 82 (549)
T ss_dssp ------------CCCHHHHHHCCCSTTSHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCGGGGHHHHHHHHH
T ss_pred CcCCCCCCCCCCCCCCCcccCCCcchhhhHHHHHHHHHHHHHHHHHhcccCHHHHHHhHHHHHhCCchhhhHHHHHHHHH
Confidence 45799999999999999998776666667889999999999999998767999999999999999999999999999999
Q ss_pred HHHhccCCc-CC--CCCChHHHHHHHHHhhhCCCCCCC
Q 048547 130 DIYNSNNDY-VW--RKENLYATSLEFRLLRQHGYPVSQ 164 (164)
Q Consensus 130 ~i~~~~~~~-~~--~~~DL~~~AL~FRLLRqhGY~VS~ 164 (164)
+||+.+... .. ...|||+|||+|||||||||+|||
T Consensus 83 ~i~~~~~~~~~~~~~~~dl~~~al~FRlLR~hGy~Vs~ 120 (549)
T 1n1b_A 83 VIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQ 120 (549)
T ss_dssp HHHHHCHHHHHCCCCSCCHHHHHHHHHHHHHTTCCCCG
T ss_pred HHHhhhccccccccccCChhhchhhhhHHHhcCCCcCH
Confidence 999864321 00 136999999999999999999996
No 6
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=100.00 E-value=8.6e-37 Score=277.16 Aligned_cols=113 Identities=39% Similarity=0.669 Sum_probs=75.2
Q ss_pred ccccCCCCCCCCCCCcccccccCCCCCchHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHhCcccchHHHHHHHH
Q 048547 49 LTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRREEELKGKVMTTIKDVTEPLNQLELIDSLQRLGLAYHFETEIRNIL 128 (164)
Q Consensus 49 ~~~~r~~a~~~PsiW~~~fl~sl~~~~~~~~~~~~~e~LKeeVr~ml~~~~d~~e~L~lID~LQRLGIsyhFe~EI~~~L 128 (164)
++..||+++|+||+||+.|++++.+.+..+.+.+++++||++||+|+.+..|++++|+|||+||||||+|||++||+++|
T Consensus 31 ~~~~r~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~~~Lk~~Vr~~~~~~~d~~~~l~lID~lqrLGi~~hFe~EI~~~L 110 (569)
T 2j5c_A 31 KDRWIRTGGYQPTLWDFSTIQSFDSEYKEEKHLMRAAGMIDQVKMMLQEEVDSIRRLELIDDLRRLGISCHFEREIVEIL 110 (569)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCGGGGHHHHHHHH
T ss_pred ccccCCCCCCCCCcCCcccccCCCchhhhHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHhCCchhhhHHHHHHHH
Confidence 45679999999999999999987666666678999999999999999876799999999999999999999999999999
Q ss_pred HHHH-hccCCcCCCCCChHHHHHHHHHhhhCCCCCCC
Q 048547 129 HDIY-NSNNDYVWRKENLYATSLEFRLLRQHGYPVSQ 164 (164)
Q Consensus 129 ~~i~-~~~~~~~~~~~DL~~~AL~FRLLRqhGY~VS~ 164 (164)
++|| +.+.. ...|||+|||+|||||||||+|||
T Consensus 111 ~~i~~~~~~~---~~~Dl~~~al~FRlLR~hGy~Vs~ 144 (569)
T 2j5c_A 111 NSKYYTNNEI---DERDLYSTALRFRLLRQYDFSVSQ 144 (569)
T ss_dssp HHHTTSSCCS---CTTCHHHHHHHHHHHHHTTCCCCG
T ss_pred HHHHHhccCc---ccCChhhhhHHhHHHHhcCCCcCH
Confidence 9999 65432 236999999999999999999996
No 7
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=100.00 E-value=2.7e-35 Score=273.11 Aligned_cols=130 Identities=29% Similarity=0.472 Sum_probs=105.1
Q ss_pred CCchhHhhhcCCCCCChhhHHHHHHhhhcCCCeeeccCcccccccccCCCCCCCCCCCcccccccCCCCCchHHHHHHHH
Q 048547 6 NPSTLVTSVNGFKCLPLATNKAAIRIMAKNKPVQCLVSAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRREE 85 (164)
Q Consensus 6 ~p~~~~~~~eg~~~~~~~~w~~~~~~~~~~gs~~~s~s~~~~~~~~~r~~a~~~PsiW~~~fl~sl~~~~~~~~~~~~~e 85 (164)
.|+||+||+|||+++ ||++++++|++||||++|||+ ||. .+++. .++.+ .+
T Consensus 174 ~p~~llhslEgl~~~---dw~~~~~~q~~~GS~~~SPsa--TAa----------------~l~~~-----~d~~~---l~ 224 (727)
T 3pya_A 174 IPTTLLHSLEGMRDL---DWEKLLKLQSQDGSFLFSPSS--TAF----------------AFMQT-----RDSNC---LE 224 (727)
T ss_dssp SCCGGGGGGGGCCCC---CHHHHGGGCCTTSSBTTBHHH--HHH----------------HHHHH-----CCHHH---HH
T ss_pred CCchHHHHHhccccc---CHHHHhcccCCCCCcccCHHH--HHH----------------HHhcC-----CCHHH---HH
Confidence 799999999999995 999999999999999999999 873 34431 12222 34
Q ss_pred HHHHHhcccccc-----cccccchhhHHHHHHHhCcccchHHHHHHHHHHHHhccCCcC--C----CCCChHHHHHHHHH
Q 048547 86 ELKGKVMTTIKD-----VTEPLNQLELIDSLQRLGLAYHFETEIRNILHDIYNSNNDYV--W----RKENLYATSLEFRL 154 (164)
Q Consensus 86 ~LKeeVr~ml~~-----~~d~~e~L~lID~LQRLGIsyhFe~EI~~~L~~i~~~~~~~~--~----~~~DL~~~AL~FRL 154 (164)
.|+..|++...+ +.+++++|++||+||||||+|||++||+++|+++|+.|...+ + ...|||+|||+|||
T Consensus 225 YL~~~v~k~~g~VP~~yP~d~~e~L~lID~LqRLGIs~hFe~EI~~~L~~i~~~~~~~g~~~~~~~~~~DL~~tAL~FRL 304 (727)
T 3pya_A 225 YLRNAVKRFNGGVPNVFPVDLFEHIWIVDRLQRLGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDTAMAFRL 304 (727)
T ss_dssp HHHHHHHHTTTCCCSSCCCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHTCCTTCCCSSSSCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcCcccccCCCCCCHHHHHHHHHH
Confidence 444455544322 479999999999999999999999999999999998765322 1 12599999999999
Q ss_pred hhhCCCCCCC
Q 048547 155 LRQHGYPVSQ 164 (164)
Q Consensus 155 LRqhGY~VS~ 164 (164)
||||||+|||
T Consensus 305 LRqhGy~VS~ 314 (727)
T 3pya_A 305 LRQHGYQVSA 314 (727)
T ss_dssp HHHTTCCCCG
T ss_pred HHhCCCCCCH
Confidence 9999999996
No 8
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=100.00 E-value=3.7e-35 Score=274.33 Aligned_cols=132 Identities=22% Similarity=0.415 Sum_probs=108.1
Q ss_pred CCchhHhhhcCCCCCChhhHHHHHHhhhcCCCeeeccCcccccccccCCCCCCCCCCCcccccccCCCCCchHHHHHHHH
Q 048547 6 NPSTLVTSVNGFKCLPLATNKAAIRIMAKNKPVQCLVSAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRREE 85 (164)
Q Consensus 6 ~p~~~~~~~eg~~~~~~~~w~~~~~~~~~~gs~~~s~s~~~~~~~~~r~~a~~~PsiW~~~fl~sl~~~~~~~~~~~~~e 85 (164)
.||||+||+|||+++ +||++++++|++||||++|||+ ||. .++++ .++.+.+..+
T Consensus 198 ~p~~llhslE~l~~~--~d~~~v~~~q~~~GS~~~SPsa--TAa----------------~l~~~-----~d~~~~~YL~ 252 (785)
T 3s9v_A 198 LPTTLLYSLEGLQEI--VDWQKIMKLQSKDGSFLSSPAS--TAA----------------VFMRT-----GNKKCLDFLN 252 (785)
T ss_dssp SCCGGGGGGGGCTTT--CCHHHHHTTCCTTSCBTTBHHH--HHH----------------HHHHH-----CCHHHHHHHH
T ss_pred CcchHHHHHHhcccc--ccHHHHHhccCCCCCcccCHHH--HHH----------------HHHhC-----CChhHHHHHH
Confidence 699999999999997 5999999999999999999999 873 34432 1334444333
Q ss_pred ----HHHHHhcccccccccccchhhHHHHHHHhCcccchHHHHHHHHHHHHhccCCcC--C---C-CCChHHHHHHHHHh
Q 048547 86 ----ELKGKVMTTIKDVTEPLNQLELIDSLQRLGLAYHFETEIRNILHDIYNSNNDYV--W---R-KENLYATSLEFRLL 155 (164)
Q Consensus 86 ----~LKeeVr~ml~~~~d~~e~L~lID~LQRLGIsyhFe~EI~~~L~~i~~~~~~~~--~---~-~~DL~~~AL~FRLL 155 (164)
+....|+.++ +.+++++|++||+||||||+|||++||+++|+++|+.|...+ + . ..|||+|||+||||
T Consensus 253 ~~~~~~~g~VP~~y--P~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlL 330 (785)
T 3s9v_A 253 FVLKKFGNHVPCHY--PLDLFERLWAVDTVERLGIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTAMGLRIL 330 (785)
T ss_dssp HHHHHHSSCCCSSC--CCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTCCTTCCCSSTTCSSCCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCcC--CCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhccccccccCCCCCHHHHHHHHHHH
Confidence 3334566666 478999999999999999999999999999999998766422 1 1 25999999999999
Q ss_pred hhCCCCCCC
Q 048547 156 RQHGYPVSQ 164 (164)
Q Consensus 156 RqhGY~VS~ 164 (164)
|||||+|||
T Consensus 331 R~~Gy~VS~ 339 (785)
T 3s9v_A 331 RLHGYNVSS 339 (785)
T ss_dssp HHTTCCCCG
T ss_pred HhcCCCCCH
Confidence 999999996
No 9
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=100.00 E-value=2.4e-35 Score=276.56 Aligned_cols=132 Identities=27% Similarity=0.411 Sum_probs=108.6
Q ss_pred CCchhHhhhcCCCCCChhhHHHHHHhhhcCCCeeeccCcccccccccCCCCCCCCCCCcccccccCCCCCchHHHHHHHH
Q 048547 6 NPSTLVTSVNGFKCLPLATNKAAIRIMAKNKPVQCLVSAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRREE 85 (164)
Q Consensus 6 ~p~~~~~~~eg~~~~~~~~w~~~~~~~~~~gs~~~s~s~~~~~~~~~r~~a~~~PsiW~~~fl~sl~~~~~~~~~~~~~e 85 (164)
+||||+||+|||+++ +||++++++|++||||++|||+ || ..++++ .++.|.+..+
T Consensus 226 ~p~~llhslE~l~~~--~d~~~~~~~q~~~GS~~~SPsa--TA----------------a~l~~~-----~d~~~~~YL~ 280 (817)
T 3sdr_A 226 VPSPLLYSLEGIQDI--VEWERIMEVQSQDGSFLSSPAS--TA----------------CVFMHT-----GDAKCLEFLN 280 (817)
T ss_dssp SCCGGGGGGGGCTTT--CCTTTGGGGCCTTSCBTTBHHH--HH----------------HHHHHH-----CCHHHHHHHH
T ss_pred CCchHHHHHHhcccc--ccHHHHHhccCCCCCcccCHHH--HH----------------HHHHhC-----CChhHHHHHH
Confidence 799999999999997 5999999999999999999999 87 334542 1344444444
Q ss_pred HH----HHHhcccccccccccchhhHHHHHHHhCcccchHHHHHHHHHHHHhccCCcC--C---C-CCChHHHHHHHHHh
Q 048547 86 EL----KGKVMTTIKDVTEPLNQLELIDSLQRLGLAYHFETEIRNILHDIYNSNNDYV--W---R-KENLYATSLEFRLL 155 (164)
Q Consensus 86 ~L----KeeVr~ml~~~~d~~e~L~lID~LQRLGIsyhFe~EI~~~L~~i~~~~~~~~--~---~-~~DL~~~AL~FRLL 155 (164)
.+ ...|+.++ +.+++++|++||+||||||+|||++||+++|+++|+.|..++ + + ..|||+|||+||||
T Consensus 281 ~~~~~~~g~VP~~y--P~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlL 358 (817)
T 3sdr_A 281 SVMIKFGNFVPCLY--PVDLLERLLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTALGFRLL 358 (817)
T ss_dssp HHHHHHSSCCCSSS--CCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHCCTTCCCSSTTCSSCCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCccC--CCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHH
Confidence 33 34466666 478999999999999999999999999999999998765421 1 1 26999999999999
Q ss_pred hhCCCCCCC
Q 048547 156 RQHGYPVSQ 164 (164)
Q Consensus 156 RqhGY~VS~ 164 (164)
|||||+|||
T Consensus 359 R~~Gy~VS~ 367 (817)
T 3sdr_A 359 RLHRYNVSP 367 (817)
T ss_dssp HHTTCCCCG
T ss_pred HHcCCCccH
Confidence 999999996
No 10
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=100.00 E-value=4.1e-35 Score=273.38 Aligned_cols=133 Identities=24% Similarity=0.415 Sum_probs=109.1
Q ss_pred cCCchhHhhhcCCCCCChhhHHHHHHhhhcCCCeeeccCcccccccccCCCCCCCCCCCcccccccCCCCCchHHHHHHH
Q 048547 5 INPSTLVTSVNGFKCLPLATNKAAIRIMAKNKPVQCLVSAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRE 84 (164)
Q Consensus 5 ~~p~~~~~~~eg~~~~~~~~w~~~~~~~~~~gs~~~s~s~~~~~~~~~r~~a~~~PsiW~~~fl~sl~~~~~~~~~~~~~ 84 (164)
-+||||+||+|||+++ +||++++++|++||||++|||+ || ..++++ .++.+.+..
T Consensus 173 ~~p~~llhslE~~~~~--~d~~~~~~~~~~~GS~~~SPsa--TA----------------a~l~~~-----~d~~~~~YL 227 (764)
T 3p5p_A 173 NIPANMLNALEGLEEV--IDWNKIMRFQSKDGSFLSSPAS--TA----------------CVLMNT-----GDEKCFTFL 227 (764)
T ss_dssp SSCGGGGGGGGGSGGG--CCTTGGGGGBCTTSCBTTBHHH--HH----------------HHHHHH-----CCHHHHHHH
T ss_pred CCCchHHHHHHhcccc--ccHHHHHhccCCCCCcccChHH--HH----------------HHHHhC-----CChhHHHHH
Confidence 4799999999999997 4999999999999999999999 87 334442 133444444
Q ss_pred H----HHHHHhcccccccccccchhhHHHHHHHhCcccchHHHHHHHHHHHHhccCCcC--C--C--CCChHHHHHHHHH
Q 048547 85 E----ELKGKVMTTIKDVTEPLNQLELIDSLQRLGLAYHFETEIRNILHDIYNSNNDYV--W--R--KENLYATSLEFRL 154 (164)
Q Consensus 85 e----~LKeeVr~ml~~~~d~~e~L~lID~LQRLGIsyhFe~EI~~~L~~i~~~~~~~~--~--~--~~DL~~~AL~FRL 154 (164)
+ +....|+.++ +.+++++|++||+||||||+|||++||+++|+++|+.|..++ + + ..|||+|||+|||
T Consensus 228 ~~~~~~~~g~VP~~y--P~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRl 305 (764)
T 3p5p_A 228 NNLLDKFGGCVPCMY--SIDLLERLSLVDNIEHLGIGRHFKQEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRT 305 (764)
T ss_dssp HHHHHHHTSCCCSSC--CCHHHHHHHHHHHHHHHTCGGGGHHHHHHHHHHHHHTCCTTCCCSSTTCSSCCHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCcC--CCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHH
Confidence 3 3345577776 478999999999999999999999999999999998765421 1 1 2699999999999
Q ss_pred hhhCCCCCCC
Q 048547 155 LRQHGYPVSQ 164 (164)
Q Consensus 155 LRqhGY~VS~ 164 (164)
||||||+|||
T Consensus 306 LR~~Gy~VS~ 315 (764)
T 3p5p_A 306 LRMHGYNVSS 315 (764)
T ss_dssp HHHTTCCCCG
T ss_pred HHhcCCCccH
Confidence 9999999996
No 11
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=97.88 E-value=3e-06 Score=79.87 Aligned_cols=49 Identities=33% Similarity=0.628 Sum_probs=31.7
Q ss_pred cccccCCCCCCCCCCCcccccccCCCCCchHHHHHHHHHHHHHhccccc
Q 048547 48 NLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRREEELKGKVMTTIK 96 (164)
Q Consensus 48 ~~~~~r~~a~~~PsiW~~~fl~sl~~~~~~~~~~~~~e~LKeeVr~ml~ 96 (164)
..++.||+|||+|++|++.|++++.+++.++.+.+++++|+++||+|+.
T Consensus 20 ~~~~~Rrsany~Ps~W~~~~i~sl~~~~~~~~~~~~~~~Lie~VK~~l~ 68 (817)
T 3sdr_A 20 TSGLIRRTANPHPNVWGYDLVHSLKSPYIDSSYRERAEVLVSEIKAMLN 68 (817)
T ss_dssp ---------------CHHHHHHTCCCGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCCCCCCCCCCCCCeeeccCCcccchhHHHHHHHHHHHHHHHhc
Confidence 3456899999999999999999998888888899999999999999985
No 12
>1pd3_A Nonstructural protein NS2; influenza virus A, NEP/NS2, unknown function; 2.60A {Influenza a virus} SCOP: a.30.3.1
Probab=71.64 E-value=3.3 Score=26.08 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=27.2
Q ss_pred HHHHHHHHHhcccccccccccchhhHHHHHHHh
Q 048547 82 RREEELKGKVMTTIKDVTEPLNQLELIDSLQRL 114 (164)
Q Consensus 82 ~~~e~LKeeVr~ml~~~~d~~e~L~lID~LQRL 114 (164)
+.+.-|.++||..|....+.++++-+..+||-|
T Consensus 16 EeIRwlIeE~Rh~Lk~TensfeQItfmqalQLl 48 (58)
T 1pd3_A 16 EEIRWLIEEVRHRLKITENSFEQITFMQALQLL 48 (58)
T ss_dssp HHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHH
Confidence 345566789999998788999999999999864
No 13
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=67.22 E-value=21 Score=23.20 Aligned_cols=59 Identities=14% Similarity=0.174 Sum_probs=35.0
Q ss_pred ccccchhhHHHHHHHhCcccchHHHHHHHHHHHHhccCCcCCCCCCh--HHHHHHHHHhhhCCCCCCC
Q 048547 99 TEPLNQLELIDSLQRLGLAYHFETEIRNILHDIYNSNNDYVWRKENL--YATSLEFRLLRQHGYPVSQ 164 (164)
Q Consensus 99 ~d~~e~L~lID~LQRLGIsyhFe~EI~~~L~~i~~~~~~~~~~~~DL--~~~AL~FRLLRqhGY~VS~ 164 (164)
+..+..=++...++++|++ ++|+++++..+ ..+. .+.-|. +..++.-.-.+|.|+.++.
T Consensus 23 dG~I~~~el~~~l~~~g~~---~~~~~~i~~~~---D~d~-dG~i~~~EF~~~~~~~~~~~~g~~lp~ 83 (92)
T 1fi6_A 23 NGFIPGSAAKEFFTKSKLP---ILELSHIWELS---DFDK-DGALTLDEFCAAFHLVVARKNGYDLPE 83 (92)
T ss_dssp TCEEEHHHHHHHHHHHSSC---HHHHHHHHHHH---CTTC-SSEEEHHHHHHHHHHHHHHHHSCCCCC
T ss_pred CCcCcHHHHHHHHHHcCCC---HHHHHHHHHHH---CCCC-CCCCCHHHHHHHHHHHHHHHcCCCCCc
Confidence 4566667788889999976 67777776654 1111 111122 2334444445688998863
No 14
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=59.01 E-value=34 Score=22.26 Aligned_cols=59 Identities=15% Similarity=0.142 Sum_probs=34.4
Q ss_pred ccccchhhHHHHHHHhCcccchHHHHHHHHHHHHhccCCcCC-CCCChHHHHHHHHHhh-hCCCCCC
Q 048547 99 TEPLNQLELIDSLQRLGLAYHFETEIRNILHDIYNSNNDYVW-RKENLYATSLEFRLLR-QHGYPVS 163 (164)
Q Consensus 99 ~d~~e~L~lID~LQRLGIsyhFe~EI~~~L~~i~~~~~~~~~-~~~DL~~~AL~FRLLR-qhGY~VS 163 (164)
+..+..=++...+.++|+. ++|+++++..+- ...+ +. +..+. ..+|.-.-.+ |.|+.++
T Consensus 24 dG~I~~~el~~~l~~~g~~---~~~~~~i~~~~D-~d~d-G~i~~~EF-~~~~~~~~~~~~~g~~lP 84 (95)
T 1c07_A 24 DGFVSGLEVREIFLKTGLP---STLLAHIWSLCD-TKDC-GKLSKDQF-ALAFHLISQKLIKGIDPP 84 (95)
T ss_dssp SSEECHHHHHHHHHTTTCC---HHHHHHHHHHHC-TTCS-SSEETTTH-HHHHHHHHHHHTSCCCCC
T ss_pred CCcEeHHHHHHHHHHcCCC---HHHHHHHHHHHC-CCCC-CcCCHHHH-HHHHHHHHHHHHcCCCCC
Confidence 4556666788889999976 677877776541 1111 10 11233 3444433444 8999876
No 15
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=49.02 E-value=55 Score=21.63 Aligned_cols=58 Identities=21% Similarity=0.179 Sum_probs=38.2
Q ss_pred ccccchhhHHHHHHHhCcccchHHHHHHHHHHHHhccCCcCCCC--CChHHHHHHHHHhhhCCCCCC
Q 048547 99 TEPLNQLELIDSLQRLGLAYHFETEIRNILHDIYNSNNDYVWRK--ENLYATSLEFRLLRQHGYPVS 163 (164)
Q Consensus 99 ~d~~e~L~lID~LQRLGIsyhFe~EI~~~L~~i~~~~~~~~~~~--~DL~~~AL~FRLLRqhGY~VS 163 (164)
+..+..=++...+.++|+. ++|+++++..+- .+ +.+. .+=+..+|.-.-+.|+|+.++
T Consensus 25 dG~Is~~el~~~l~~~~l~---~~~l~~i~~~~D---~d-~dG~i~~~EF~~~~~~~~~~~~g~~~~ 84 (99)
T 1qjt_A 25 TGRVLALDAAAFLKKSGLP---DLILGKIWDLAD---TD-GKGVLSKQEFFVALRLVACAQNGLEVS 84 (99)
T ss_dssp SSCCCSHHHHHHHHTSSSC---HHHHHHHHHHHC---CS-SSSSCCSHHHHHHHHHHHHHTTTCCSS
T ss_pred CCcCCHHHHHHHHHHcCCC---HHHHHHHHHHHC---CC-CCCcCCHHHHHHHHHHHHHHHcCCCCC
Confidence 3455556677888899976 677777776551 11 1111 233567788888899999886
No 16
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=43.34 E-value=74 Score=21.51 Aligned_cols=59 Identities=12% Similarity=-0.021 Sum_probs=37.2
Q ss_pred ccccchhhHHHHHHHhCcccchHHHHHHHHHHHHhccCCcCCCCCCh--HHHHHHHHHhhhCCCCCCC
Q 048547 99 TEPLNQLELIDSLQRLGLAYHFETEIRNILHDIYNSNNDYVWRKENL--YATSLEFRLLRQHGYPVSQ 164 (164)
Q Consensus 99 ~d~~e~L~lID~LQRLGIsyhFe~EI~~~L~~i~~~~~~~~~~~~DL--~~~AL~FRLLRqhGY~VS~ 164 (164)
+..+..=++...+.++|++ ++|+++++..+ ..+ +.+.-|. +..||.-.-.++.|+.++.
T Consensus 28 dG~Is~~el~~~l~~~gl~---~~el~~i~~~~---D~d-~dG~id~~EF~~~m~~~~~~~~g~~lP~ 88 (106)
T 1eh2_A 28 NGFLSGDKVKPVLLNSKLP---VDILGRVWELS---DID-HDGMLDRDEFAVAMFLVYCALEKEPVPM 88 (106)
T ss_dssp SSCCBHHHHHHHHHTTTCC---HHHHHHHHHHH---CSS-CSSBCCHHHHHHHHHHHHHHHHTCCCCS
T ss_pred CCeEcHHHHHHHHHHcCCC---HHHHHHHHHHH---cCC-CCCcCcHHHHHHHHHHHHHHHcCCCCCC
Confidence 4566667788899999987 66777776554 111 1121243 4566666667778988763
No 17
>2guk_A Hypothetical protein PG1857; alpha-beta, alpha-helical bundle, structural genomics, PSI, structure initiative; 1.91A {Porphyromonas gingivalis} SCOP: d.360.1.1
Probab=42.82 E-value=24 Score=25.64 Aligned_cols=42 Identities=10% Similarity=0.061 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhcccccccccccchhhHHHHHHHhCcccchH
Q 048547 80 YKRREEELKGKVMTTIKDVTEPLNQLELIDSLQRLGLAYHFE 121 (164)
Q Consensus 80 ~~~~~e~LKeeVr~ml~~~~d~~e~L~lID~LQRLGIsyhFe 121 (164)
....+-++++.||.|+.-+...-..-..+..|++-||+|+.+
T Consensus 16 f~hhIYEy~KGvR~LvL~T~~~~~~~~~~~rL~~~~I~Y~iq 57 (120)
T 2guk_A 16 FMHHIYEFEKGVRSMVLATLANDDIPYAEERLRSRQIPYFAQ 57 (120)
T ss_dssp HHHHHHHHHHTSCSEEEEEEEGGGHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhhhhHHHHHHhcCHhhHHHHHHHHHhCCCCEEEE
Confidence 345667889999999865433344455788999999999975
No 18
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=39.07 E-value=8.2 Score=36.17 Aligned_cols=39 Identities=23% Similarity=0.530 Sum_probs=14.3
Q ss_pred CCCCCCCcccccccCCCCCc-hHHHHHHHHHHHHHhcccc
Q 048547 57 NYQPSIWDHDFLQSLNSNYT-DETYKRREEELKGKVMTTI 95 (164)
Q Consensus 57 ~~~PsiW~~~fl~sl~~~~~-~~~~~~~~e~LKeeVr~ml 95 (164)
+|+|+.|.+.++.++..+.. ...+.++++.+++++|+|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 44 (785)
T 3s9v_A 5 EFPPGFWKDDLIDSLTSSHKVAASDEKRIETLISEIKNMF 44 (785)
T ss_dssp ----------------------CCHHHHHHHHHHHHHHHH
T ss_pred cCCcccCcccccccCCCccccCcchhHHHHHHHHHHHHHh
Confidence 67899999999998766554 3335677888999999998
No 19
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=37.95 E-value=1.1e+02 Score=22.03 Aligned_cols=59 Identities=10% Similarity=0.077 Sum_probs=37.9
Q ss_pred ccccchhhHHHHHHHhCcccchHHHHHHHHHHHHhccCCcCCCC--CChHHHHHHHHHhhhCCCCCCC
Q 048547 99 TEPLNQLELIDSLQRLGLAYHFETEIRNILHDIYNSNNDYVWRK--ENLYATSLEFRLLRQHGYPVSQ 164 (164)
Q Consensus 99 ~d~~e~L~lID~LQRLGIsyhFe~EI~~~L~~i~~~~~~~~~~~--~DL~~~AL~FRLLRqhGY~VS~ 164 (164)
+..+..=++...+.++|+. ++|+++++..+ ..+. ... .+=+..+|.-.-+++.|+.++.
T Consensus 64 dG~Is~~El~~~l~~~gl~---~~el~~I~~~~---D~d~-dG~Ld~~EF~~am~li~~~~~G~~lP~ 124 (139)
T 2jq6_A 64 NGKITGANAKKEMVKSKLP---NTVLGKIWKLA---DVDK-DGLLDDEEFALANHLIKVKLEGHELPA 124 (139)
T ss_dssp SSEEEHHHHHHHHHHTTCC---HHHHHHHHHHH---CSSC-CSEEEHHHHHHHHHHHHHHHTTSCCCS
T ss_pred CCeECHHHHHHHHHHhCcC---HHHHHHHHHHh---CCCC-CCcCcHHHHHHHHHHHHHHHcCCCCCc
Confidence 4566777788899999987 66777776654 1111 111 1334566666667899998863
No 20
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=33.30 E-value=15 Score=22.55 Aligned_cols=8 Identities=50% Similarity=0.995 Sum_probs=6.6
Q ss_pred HHhhhCCC
Q 048547 153 RLLRQHGY 160 (164)
Q Consensus 153 RLLRqhGY 160 (164)
+||||||.
T Consensus 39 ~LLkqHgl 46 (48)
T 3vmx_A 39 KLLKQNGL 46 (48)
T ss_dssp HHHHHTTC
T ss_pred HHHHHcCC
Confidence 68999985
No 21
>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1
Probab=32.69 E-value=41 Score=21.13 Aligned_cols=28 Identities=21% Similarity=0.192 Sum_probs=23.0
Q ss_pred cccchhhHHHHHHHhCcccchHHHHHHHHHH
Q 048547 100 EPLNQLELIDSLQRLGLAYHFETEIRNILHD 130 (164)
Q Consensus 100 d~~e~L~lID~LQRLGIsyhFe~EI~~~L~~ 130 (164)
-..+.+.||...+++|++ -+||.+.|..
T Consensus 11 ~d~ewl~LI~~Ak~lGls---leEIrefL~l 38 (57)
T 1b0n_B 11 LDQEWVELMVEAKEANIS---PEEIRKYLLL 38 (57)
T ss_dssp CCHHHHHHHHHHHHTTCC---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCC---HHHHHHHHHH
Confidence 346789999999999998 5888888853
No 22
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=30.93 E-value=15 Score=23.24 Aligned_cols=8 Identities=75% Similarity=1.277 Sum_probs=5.3
Q ss_pred HHhhhCCC
Q 048547 153 RLLRQHGY 160 (164)
Q Consensus 153 RLLRqhGY 160 (164)
+||||||.
T Consensus 46 ~LLkqHgl 53 (58)
T 3a2a_A 46 KLLRQHGL 53 (58)
T ss_dssp HHHHHC--
T ss_pred HHHHHcCC
Confidence 68999985
No 23
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=23.09 E-value=2e+02 Score=20.26 Aligned_cols=59 Identities=10% Similarity=0.136 Sum_probs=35.3
Q ss_pred ccccchhhHHHHHHHhCcccchHHHHHHHHHHHHhccCCcCCCCCChH--HHHHHHHHhhhCCCCCCC
Q 048547 99 TEPLNQLELIDSLQRLGLAYHFETEIRNILHDIYNSNNDYVWRKENLY--ATSLEFRLLRQHGYPVSQ 164 (164)
Q Consensus 99 ~d~~e~L~lID~LQRLGIsyhFe~EI~~~L~~i~~~~~~~~~~~~DL~--~~AL~FRLLRqhGY~VS~ 164 (164)
+..+..-++.+.+.+.|+. ++++.++.+.. +.++ .+.-|.. .+||..=-+++.|+.++.
T Consensus 46 dG~Isg~elr~~~~~sgLp---~~~L~~Iw~la---D~d~-dG~Ld~~EF~~aM~Li~~~~~G~~lP~ 106 (121)
T 3fia_A 46 SGFITGDQARNFFFQSGLP---QPVLAQIWALA---DMNN-DGRMDQVEFSIAMKLIKLKLQGYQLPS 106 (121)
T ss_dssp TTBEEHHHHHHHHGGGCCC---HHHHHHHHHHH---CTTC-SSEECHHHHHHHHHHHHHHHTTCCCCS
T ss_pred CCeECHHHHHHHHHHcCCC---HHHHHHHHHHH---cCCC-CCcCCHHHHHHHHHHHHHHHcCCCCCC
Confidence 4556667788999999998 44544444333 1221 1112444 566666667789998863
No 24
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=22.26 E-value=66 Score=21.06 Aligned_cols=27 Identities=30% Similarity=0.491 Sum_probs=20.4
Q ss_pred cchhhHHHHHHHhCcccchHHHHHHHHHHH
Q 048547 102 LNQLELIDSLQRLGLAYHFETEIRNILHDI 131 (164)
Q Consensus 102 ~e~L~lID~LQRLGIsyhFe~EI~~~L~~i 131 (164)
++.|.+|-.++.+|++ =+||+++|+..
T Consensus 3 l~rL~~I~~lr~lGfs---L~eIk~~l~~~ 29 (99)
T 1q08_A 3 LQRLKFIRHARQLGFS---LESIRELLSIR 29 (99)
T ss_dssp HHHHHHHHHHHHTTCC---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCC---HHHHHHHHHHH
Confidence 4578888899999977 36888887643
No 25
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=21.22 E-value=40 Score=22.95 Aligned_cols=59 Identities=15% Similarity=0.249 Sum_probs=34.3
Q ss_pred ccccchhhHHHHHHHhCcccchHHHHHHHHHHHHhccCCcCCCCCCh--HHHHHHHHHhhhCCCCCCC
Q 048547 99 TEPLNQLELIDSLQRLGLAYHFETEIRNILHDIYNSNNDYVWRKENL--YATSLEFRLLRQHGYPVSQ 164 (164)
Q Consensus 99 ~d~~e~L~lID~LQRLGIsyhFe~EI~~~L~~i~~~~~~~~~~~~DL--~~~AL~FRLLRqhGY~VS~ 164 (164)
+..+..=++...+.++|++ ++|+++++..+ ..+. .+.-|. +..+|.-.-.+|.|+.++.
T Consensus 36 dG~Is~~el~~~l~~~gl~---~~el~~i~~~~---D~d~-dG~I~~~EF~~~m~~~~~~~~G~~lP~ 96 (110)
T 1iq3_A 36 SSFISGSVAKNFFTKSKLS---IPELSYIWELS---DADC-DGALTLPEFCAAFHLIVARKNGYPLPE 96 (110)
T ss_dssp SSEEEHHHHHHHCCSSSCS---SCCHHHHHHHH---CSSS-CSEEEHHHHHHHHHHHHHHHHTCCCCC
T ss_pred CCeEcHHHHHHHHHHcCCC---HHHHHHHHHHH---cCCC-CCcCcHHHHHHHHHHHHHHHcCCCCCc
Confidence 4555666677788888976 45777776554 1111 111122 3445555556788998863
No 26
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=21.18 E-value=65 Score=25.04 Aligned_cols=21 Identities=5% Similarity=0.181 Sum_probs=17.8
Q ss_pred CChHHHHHHHHHhhhCCCCCC
Q 048547 143 ENLYATSLEFRLLRQHGYPVS 163 (164)
Q Consensus 143 ~DL~~~AL~FRLLRqhGY~VS 163 (164)
.+|..++=.++.|+..||.-+
T Consensus 124 ~~l~~i~~~Y~~Lk~~G~~FP 144 (226)
T 3zyq_A 124 PKYKVVQDTYQIMKVEGHVFP 144 (226)
T ss_dssp GGGHHHHHHHHHHHHHTCCCC
T ss_pred cchHHHHHHHHHHHhcCCCcc
Confidence 468888899999999999764
No 27
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=20.00 E-value=1.1e+02 Score=22.56 Aligned_cols=21 Identities=10% Similarity=0.241 Sum_probs=18.0
Q ss_pred CChHHHHHHHHHhhhCCCCCC
Q 048547 143 ENLYATSLEFRLLRQHGYPVS 163 (164)
Q Consensus 143 ~DL~~~AL~FRLLRqhGY~VS 163 (164)
.++..+.-.++.||..||.-+
T Consensus 131 ~~l~~i~~~Y~~Lk~~G~~FP 151 (163)
T 1x5b_A 131 PQFSLISATIKSMKEEGITFP 151 (163)
T ss_dssp STTHHHHHHHHHHHTTTCCCC
T ss_pred cccHHHHHHHHHHHHcCCCCC
Confidence 468889999999999999754
Done!