BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048560
(431 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2YIJ|A Chain A, Crystal Structure Of Phospholipase A1
pdb|2YIJ|B Chain B, Crystal Structure Of Phospholipase A1
Length = 419
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 229/408 (56%), Gaps = 30/408 (7%)
Query: 22 RKLADIWHDIHGVDDWDGMLDPLDPLLRSELIRYGEMVQACHDAFDFEPFSKYCGSCKYA 81
R+ A W D+ G + W G L PLD LR +I YGE QA +D F+ S++ G+ Y+
Sbjct: 17 REFAKRWRDLSGQNHWKGXLQPLDQDLREYIIHYGEXAQAGYDTFNINTESQFAGASIYS 76
Query: 82 PSEFFECLGMA----QHGYQVNSYIHATYNINLPNIFQR-SLRPDAWSHTANWIGYIAVS 136
+FF +G+ Y+V +I+AT +I++P F + + WS +NW GY+AV+
Sbjct: 77 RKDFFAKVGLEIAHPYTKYKVTKFIYATSDIHVPESFLLFPISREGWSKESNWXGYVAVT 136
Query: 137 NDEMSAHLGRRDITIAWRGTKTKLEWIADFMYFLRPITLKKIPCPDPRVKVESGFLNLYT 196
+D+ +A LGRRDI ++WRG+ LEW+ DF + L +K + +V++ G+ ++Y
Sbjct: 137 DDQGTALLGRRDIVVSWRGSVQPLEWVEDFEFGLVN-AIKIFGERNDQVQIHQGWYSIYX 195
Query: 197 NKDQSSQICKRSAREHVLEEVRRLVSQYQNENLSITITGHSLGSALAILSAYDIAETGVD 256
++D+ S K +AR+ VL EV RL+ +Y++E +SITI GHSLG+ALA LSA DI G +
Sbjct: 196 SQDERSPFTKTNARDQVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDIVANGYN 255
Query: 257 VMDD--GQAVPICVFSFAGPRVGNTRFKERLAQL-GVKVLRVVNIHDKIPEAPGLFLNEH 313
++ P+ F FA PRVG++ F++ + L ++VLR N+ D IP P +
Sbjct: 256 RPKSRPDKSCPVTAFVFASPRVGDSDFRKLFSGLEDIRVLRTRNLPDVIPIYPPI----- 310
Query: 314 IPPMLRKLGEASLWFYSHVGAELTLDHKSSPFLKETNDLACYHNLEAHLHLLDGYQG--K 371
YS VG E +D + SP+ K +LA +H LE +LH + G QG K
Sbjct: 311 --------------GYSEVGDEFPIDTRKSPYXKSPGNLATFHCLEGYLHGVAGTQGTNK 356
Query: 372 GQRFVLTSGRDIALVNKQADFLKDHLLVPPNWQQHENKGLVRNNEGRW 419
F L R I LVNK D LKD VP W+ +NKG + ++G W
Sbjct: 357 ADLFRLDVERAIGLVNKSVDGLKDECXVPGKWRVLKNKGXAQQDDGSW 404
>pdb|1TGL|A Chain A, A Serine Protease Triad Forms The Catalytic Centre Of A
Triacylglycerol Lipase
Length = 269
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 27/181 (14%)
Query: 128 NWIGYIAVSNDEMSAHLGRRDITIAWRGTKTKLEWIADFMYFLRPITLKKIPCPDPRVKV 187
W I +N ++ + I I +RG+ + WIAD + P++ P KV
Sbjct: 54 TWSTLIYDTNAMVARGDSEKTIYIVFRGSSSIRNWIADLTFV--PVSYP----PVSGTKV 107
Query: 188 ESGFLNLYTNKDQSSQICKRSAREHVLEEVRRLVSQY-QNENLSITITGHSLGSALAILS 246
GFL+ Y E V ++ Q+ Q + + +TGHSLG A A+L
Sbjct: 108 HKGFLDSYGEVQN--------------ELVATVLDQFKQYPSYKVAVTGHSLGGATALLC 153
Query: 247 AYDIAETGVDVMDDG-QAVPICVFSFAGPRVGNTRFKERLAQLGVKVLRVVNIHDKIPEA 305
A D+ + ++G + + +++ PRVGN F + G+ R VN D +P
Sbjct: 154 ALDLYQ-----REEGLSSSNLFLYTQGQPRVGNPAFANYVVSTGIPYRRTVNERDIVPHL 208
Query: 306 P 306
P
Sbjct: 209 P 209
>pdb|1DT3|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT3|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|D Chain D, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|E Chain E, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|F Chain F, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|G Chain G, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|H Chain H, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DTE|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DTE|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DU4|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|D Chain D, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1EIN|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1EIN|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1EIN|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1TIB|A Chain A, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|4DYH|A Chain A, Crystal Structure Of Glycosylated Lipase From Humicola
Lanuginosa At 2 Angstrom Resolution
pdb|4DYH|B Chain B, Crystal Structure Of Glycosylated Lipase From Humicola
Lanuginosa At 2 Angstrom Resolution
pdb|4EA6|A Chain A, Crystal Structure Of Fungal Lipase From
Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
Resolution.
pdb|4EA6|B Chain B, Crystal Structure Of Fungal Lipase From
Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
Resolution.
pdb|4FLF|A Chain A, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.15a Resolution.
pdb|4FLF|B Chain B, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.15a Resolution.
pdb|4GBG|A Chain A, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
From Thermomyces Lanuginosa At 2.9 A Resolution
pdb|4GBG|B Chain B, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
From Thermomyces Lanuginosa At 2.9 A Resolution
pdb|4GI1|A Chain A, Structure Of The Complex Of Three Phase Partition Treated
Lipase From Thermomyces Lanuginosa With
16-Hydroxypalmitic Acid At 2.4 A Resolution
pdb|4GI1|B Chain B, Structure Of The Complex Of Three Phase Partition Treated
Lipase From Thermomyces Lanuginosa With
16-Hydroxypalmitic Acid At 2.4 A Resolution
pdb|4GLB|A Chain A, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
Thermomyces Lanuginosa At 2.69 A Resolution
pdb|4GLB|B Chain B, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
Thermomyces Lanuginosa At 2.69 A Resolution
pdb|4GWL|A Chain A, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.55a Resolution
pdb|4GWL|B Chain B, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.55a Resolution
pdb|4GHW|A Chain A, Crystal Structure Of The Complex Of Fungal Lipase From
Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
Resolution
pdb|4GHW|B Chain B, Crystal Structure Of The Complex Of Fungal Lipase From
Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
Resolution
Length = 269
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 37/185 (20%)
Query: 124 SHTANWIGYIAVSNDEMSAHLGRRDITIAWRGTKTKLEWIADFMYFLRPITLKKIPCPDP 183
S + G++A+ N + I +++RG+++ WI + + L+ I C
Sbjct: 58 SGVGDVTGFLALDNTN-------KLIVLSFRGSRSIENWIGNLNFDLKEINDICSGC--- 107
Query: 184 RVKVESGFLNLYTN-KDQSSQICKRSAREHVLEEVRRLVSQYQNENLSITITGHSLGSAL 242
+ GF + + + D Q + + REH + + TGHSLG AL
Sbjct: 108 --RGHDGFTSSWRSVADTLRQKVEDAVREH--------------PDYRVVFTGHSLGGAL 151
Query: 243 AILSAYDIAETGVDVMDDGQAVPICVFSFAGPRVGNTRFKERLA-QLGVKVLRVVNIHDK 301
A ++ D+ G D I VFS+ PRVGN F E L Q G + R+ + +D
Sbjct: 152 ATVAGADLRGNGYD---------IDVFSYGAPRVGNRAFAEFLTVQTGGTLYRITHTNDI 202
Query: 302 IPEAP 306
+P P
Sbjct: 203 VPRLP 207
>pdb|5TGL|A Chain A, A Model For Interfacial Activation In Lipases From The
Structure Of A Fungal Lipase-Inhibitor Complex
Length = 269
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 27/181 (14%)
Query: 128 NWIGYIAVSNDEMSAHLGRRDITIAWRGTKTKLEWIADFMYFLRPITLKKIPCPDPRVKV 187
W I +N ++ + I I +RG+ + WIAD + P++ P KV
Sbjct: 54 TWSTLIYDTNAMVARGDSEKTIYIVFRGSSSIRNWIADLTFV--PVSYP----PVSGTKV 107
Query: 188 ESGFLNLYTNKDQSSQICKRSAREHVLEEVRRLVSQY-QNENLSITITGHSLGSALAILS 246
GFL+ Y E V ++ Q+ Q + + +TGHSLG A A+L
Sbjct: 108 HKGFLDSYGEVQN--------------ELVATVLDQFKQYPSYKVAVTGHSLGGATALLC 153
Query: 247 AYDIAETGVDVMDDG-QAVPICVFSFAGPRVGNTRFKERLAQLGVKVLRVVNIHDKIPEA 305
A D+ + ++G + + +++ PRVGN F + G+ R VN D +P
Sbjct: 154 ALDLYQ-----REEGLSSSNLFLYTQGQPRVGNPAFANYVVSTGIPYRRTVNERDIVPHL 208
Query: 306 P 306
P
Sbjct: 209 P 209
>pdb|4TGL|A Chain A, Catalysis At The Interface: The Anatomy Of A
Conformational Change In A Triglyceride Lipase
Length = 269
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 27/181 (14%)
Query: 128 NWIGYIAVSNDEMSAHLGRRDITIAWRGTKTKLEWIADFMYFLRPITLKKIPCPDPRVKV 187
W I +N ++ + I I +RG+ + WIAD + P++ P KV
Sbjct: 54 TWSTLIYDTNAMVARGDSEKTIYIVFRGSSSIRNWIADLTFV--PVSYP----PVSGTKV 107
Query: 188 ESGFLNLYTNKDQSSQICKRSAREHVLEEVRRLVSQY-QNENLSITITGHSLGSALAILS 246
GFL+ Y E V ++ Q+ Q + + +TGHSLG A A+L
Sbjct: 108 HKGFLDSYGEVQN--------------ELVATVLDQFKQYPSYKVAVTGHSLGGATALLC 153
Query: 247 AYDIAETGVDVMDDG-QAVPICVFSFAGPRVGNTRFKERLAQLGVKVLRVVNIHDKIPEA 305
A D+ + ++G + + +++ PRVGN F + G+ R VN D +P
Sbjct: 154 ALDLYQ-----REEGLSSSNLFLYTQGQPRVGNPAFANYVVSTGIPYRRTVNERDIVPHL 208
Query: 306 P 306
P
Sbjct: 209 P 209
>pdb|1GT6|A Chain A, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
Complex With Oleic Acid
pdb|1GT6|B Chain B, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
Complex With Oleic Acid
Length = 269
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 37/185 (20%)
Query: 124 SHTANWIGYIAVSNDEMSAHLGRRDITIAWRGTKTKLEWIADFMYFLRPITLKKIPCPDP 183
S + G++A+ N + I +++RG+++ WI + + L+ I C
Sbjct: 58 SGVGDVTGFLALDNTN-------KLIVLSFRGSRSIENWIGNLNFDLKEINDICSGC--- 107
Query: 184 RVKVESGFLNLYTN-KDQSSQICKRSAREHVLEEVRRLVSQYQNENLSITITGHSLGSAL 242
+ GF + + + D Q + + REH + + TGH+LG AL
Sbjct: 108 --RGHDGFTSSWRSVADTLRQKVEDAVREH--------------PDYRVVFTGHALGGAL 151
Query: 243 AILSAYDIAETGVDVMDDGQAVPICVFSFAGPRVGNTRFKERLA-QLGVKVLRVVNIHDK 301
A ++ D+ G D I VFS+ PRVGN F E L Q G + R+ + +D
Sbjct: 152 ATVAGADLRGNGYD---------IDVFSYGAPRVGNRAFAEFLTVQTGGTLYRITHTNDI 202
Query: 302 IPEAP 306
+P P
Sbjct: 203 VPRLP 207
>pdb|1TIA|A Chain A, An Unusual Buried Polar Cluster In A Family Of Fungal
Lipases
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 38/188 (20%)
Query: 131 GYIAVSNDEMSAHLGRRDITIAWRGTKTKLEWIADFMYFLRPITLKKIPCPDPRVKVESG 190
GYIAV + + + +A+RG+ + W+AD + + P E G
Sbjct: 65 GYIAVDHTNSA-------VVLAFRGSYSVRNWVADATF------VHTNPGLCDGCLAELG 111
Query: 191 FLNLYTNKDQSSQICKRSAREHVLEEVRRLVSQYQNENLSITITGHSLGSALAILSAYDI 250
F + + + R+ +++E++ +V+Q N N + + GHSLG+A+A L+A D+
Sbjct: 112 FWSSW-----------KLVRDDIIKELKEVVAQ--NPNYELVVVGHSLGAAVATLAATDL 158
Query: 251 AETGVDVMDDGQAVPIC-VFSFAGPRVGNTRFKERLAQLGVKVLRVVNIHDKIPEAPGLF 309
G+ P ++++A PRVGN + + G R + +D +P+ P L
Sbjct: 159 ---------RGKGYPSAKLYAYASPRVGNAALAKYITAQG-NNFRFTHTNDPVPKLPLLS 208
Query: 310 LNE-HIPP 316
+ H+ P
Sbjct: 209 MGYVHVSP 216
>pdb|3TGL|A Chain A, Structure And Molecular Model Refinement Of Rhizomucor
Miehei Triacylglyceride Lipase: A Case Study Of The Use
Of Simulated Annealing In Partial Model Refinement
Length = 269
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 27/181 (14%)
Query: 128 NWIGYIAVSNDEMSAHLGRRDITIAWRGTKTKLEWIADFMYFLRPITLKKIPCPDPRVKV 187
W I +N ++ + I I +RG+ + WIAD + P++ P KV
Sbjct: 54 TWSTLIYDTNAMVARGDSEKTIYIVFRGSSSIRNWIADLTFV--PVSYP----PVSGTKV 107
Query: 188 ESGFLNLYTNKDQSSQICKRSAREHVLEEVRRLVSQY-QNENLSITITGHSLGSALAILS 246
GFL+ Y E V ++ Q+ Q + + +TGHSLG A +L
Sbjct: 108 HKGFLDSYGEVQN--------------ELVATVLDQFKQYPSYKVAVTGHSLGGATVLLC 153
Query: 247 AYDIAETGVDVMDDG-QAVPICVFSFAGPRVGNTRFKERLAQLGVKVLRVVNIHDKIPEA 305
A D+ + ++G + + +++ PRVG+ F + G+ R VN D +P
Sbjct: 154 ALDLYQ-----REEGLSSSNLFLYTQGQPRVGDPAFANYVVSTGIPYRRTVNERDIVPHL 208
Query: 306 P 306
P
Sbjct: 209 P 209
>pdb|1TIC|A Chain A, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|1TIC|B Chain B, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|1LGY|A Chain A, Lipase Ii From Rhizopus Niveus
pdb|1LGY|B Chain B, Lipase Ii From Rhizopus Niveus
pdb|1LGY|C Chain C, Lipase Ii From Rhizopus Niveus
Length = 269
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 27/163 (16%)
Query: 146 RRDITIAWRGTKTKLEWIADFMYFLRPITLKKIPCPDPRVKVESGFLNLYTNKDQSSQIC 205
++ I + +RGT + I D ++ P KV +GFL+ Y
Sbjct: 73 QKTIYLVFRGTNSFRSAITDIVFNFSDYK------PVKGAKVHAGFLSSY---------- 116
Query: 206 KRSAREHVLEEVRRLVSQ--YQNENLSITITGHSLGSALAILSAYDIAETGVDVMDDGQA 263
E V+ + +V + + + +TGHSLG A A+L+ D+ + +
Sbjct: 117 -----EQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDLYQREPRLSPKN-- 169
Query: 264 VPICVFSFAGPRVGNTRFKERLAQLGVKVLRVVNIHDKIPEAP 306
+ +F+ GPRVGN F + G+ R V+ D +P P
Sbjct: 170 --LSIFTVGGPRVGNPTFAYYVESTGIPFQRTVHKRDIVPHVP 210
>pdb|1USW|A Chain A, Crystal Structure Of Ferulic Acid Esterase From
Aspergillus Niger
Length = 260
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 34/169 (20%)
Query: 146 RRDITIAWRGTKTKLEWIADFMYFLRPITLKKIP-CPDPRVKVESGFLNLYTNKDQSSQI 204
++I +RGT + D Y L P +P C D +V G+ I
Sbjct: 58 SKEIITVFRGTGSDTNLQLDTNYTLTP--FDTLPQCND--CEVHGGYY-----------I 102
Query: 205 CKRSAREHVLEEVRRLVSQYQNENLSITITGHSLGSALAILSAYDIAETGVDVMDDGQAV 264
S ++ V V++ SQY + ++T+TGHSLG+++A L+A ++ T +V
Sbjct: 103 GWISVQDQVESLVKQQASQY--PDYALTVTGHSLGASMAALTAAQLSATYDNVR------ 154
Query: 265 PICVFSFAGPRVGNTRFKERLAQL-------GVKVLRVVNIHDKIPEAP 306
+++F PR GN F + + RV + +D IP P
Sbjct: 155 ---LYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLP 200
>pdb|2HL6|A Chain A, Structure Of Homologously Expressed Ferrulate Esterase Of
Aspergillus Niger In Complex With Caps
pdb|2HL6|B Chain B, Structure Of Homologously Expressed Ferrulate Esterase Of
Aspergillus Niger In Complex With Caps
pdb|2IX9|A Chain A, Respective Role Of Protein Folding And Glycosylation In
The Thermal Stability Of Recombinant Feruloyl Esterase A
pdb|2IX9|B Chain B, Respective Role Of Protein Folding And Glycosylation In
The Thermal Stability Of Recombinant Feruloyl Esterase A
Length = 260
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 34/169 (20%)
Query: 146 RRDITIAWRGTKTKLEWIADFMYFLRPITLKKIP-CPDPRVKVESGFLNLYTNKDQSSQI 204
++I +RGT + D Y L P +P C D +V G+ I
Sbjct: 58 SKEIITVFRGTGSDTNLQLDTNYTLTP--FDTLPQCND--CEVHGGYY-----------I 102
Query: 205 CKRSAREHVLEEVRRLVSQYQNENLSITITGHSLGSALAILSAYDIAETGVDVMDDGQAV 264
S ++ V V++ SQY + ++T+TGHSLG+++A L+A ++ T +V
Sbjct: 103 GWISVQDQVESLVKQQASQY--PDYALTVTGHSLGASMAALTAAQLSATYDNVR------ 154
Query: 265 PICVFSFAGPRVGNTRFKERLAQL-------GVKVLRVVNIHDKIPEAP 306
+++F PR GN F + + RV + +D IP P
Sbjct: 155 ---LYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLP 200
>pdb|1UWC|A Chain A, Feruloyl Esterase From Aspergillus Niger
pdb|1UWC|B Chain B, Feruloyl Esterase From Aspergillus Niger
pdb|1UZA|A Chain A, Crystallographic Structure Of A Feruloyl Esterase From
Aspergillus Niger
pdb|1UZA|B Chain B, Crystallographic Structure Of A Feruloyl Esterase From
Aspergillus Niger
Length = 261
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 34/169 (20%)
Query: 146 RRDITIAWRGTKTKLEWIADFMYFLRPITLKKIP-CPDPRVKVESGFLNLYTNKDQSSQI 204
++I +RGT + D Y L P +P C D +V G+ I
Sbjct: 58 SKEIITVFRGTGSDTNLQLDTNYTLTP--FDTLPQCND--CEVHGGYY-----------I 102
Query: 205 CKRSAREHVLEEVRRLVSQYQNENLSITITGHSLGSALAILSAYDIAETGVDVMDDGQAV 264
S ++ V V++ SQY + ++T+TGHSLG+++A L+A ++ T +V
Sbjct: 103 GWISVQDQVESLVKQQASQY--PDYALTVTGHSLGASMAALTAAQLSATYDNVR------ 154
Query: 265 PICVFSFAGPRVGNTRFKERLAQL-------GVKVLRVVNIHDKIPEAP 306
+++F PR GN F + + RV + +D IP P
Sbjct: 155 ---LYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLP 200
>pdb|3NGM|A Chain A, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|B Chain B, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|C Chain C, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|D Chain D, Crystal Structure Of Lipase From Gibberella Zeae
Length = 319
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 83/226 (36%), Gaps = 42/226 (18%)
Query: 146 RRDITIAWRGTKTKLEWIADFMYFLRPITLKKIPCPDPRVKVESGFLNLYTNKDQSSQIC 205
R++I +++RG+ W+ + + +L V SGF N + ++
Sbjct: 72 RKEIVVSFRGSINIRNWLTNLDFDQDDCSLTS------GCGVHSGFQNAWNEISAAAT-- 123
Query: 206 KRSAREHVLEEVRRLVSQYQNENLSITITGHSLGSALAILSAYDIAETGVDVMDDGQAVP 265
++ N + + GHSLG A+A L+ ++ G P
Sbjct: 124 -----------AAVAKARKANPSFKVVSVGHSLGGAVATLAGANLRIGGT---------P 163
Query: 266 ICVFSFAGPRVGNTRFKERLAQLGVKVLRVVNIHDKIPEAPGL-FLNEHIPPMLRKLGEA 324
+ ++++ PRVGNT+ ++ RV N D +P P L F H P
Sbjct: 164 LDIYTYGSPRVGNTQLAAFVSNQAGGEFRVTNAKDPVPRLPPLIFGYRHTSP-------- 215
Query: 325 SLWFYSHVGAELTLDHKSSPFLKETNDLACYH-----NLEAHLHLL 365
W G ++ + +L C +++AHLH
Sbjct: 216 EYWLSGSGGDKIDYTINDVKVCEGAANLQCNGGTLGLDIDAHLHYF 261
>pdb|2BJH|A Chain A, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
pdb|2BJH|B Chain B, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
pdb|2BJH|C Chain C, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
Length = 260
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 34/169 (20%)
Query: 146 RRDITIAWRGTKTKLEWIADFMYFLRPITLKKIP-CPDPRVKVESGFLNLYTNKDQSSQI 204
++I +RGT + D Y L P +P C D +V G+ I
Sbjct: 58 SKEIITVFRGTGSDTNLQLDTNYTLTP--FDTLPQCND--CEVHGGYY-----------I 102
Query: 205 CKRSAREHVLEEVRRLVSQYQNENLSITITGHSLGSALAILSAYDIAETGVDVMDDGQAV 264
S ++ V V++ SQY + ++T+TGH+LG+++A L+A ++ T +V
Sbjct: 103 GWISVQDQVESLVKQQASQY--PDYALTVTGHALGASMAALTAAQLSATYDNVR------ 154
Query: 265 PICVFSFAGPRVGNTRFKERLAQL-------GVKVLRVVNIHDKIPEAP 306
+++F PR GN F + + RV + +D IP P
Sbjct: 155 ---LYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLP 200
>pdb|3UUF|A Chain A, Crystal Structure Of Mono- And Diacylglycerol Lipase From
Malassezia Globosa
Length = 278
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 231 ITITGHSLGSALAILSAYDIAETGVDVMDDGQAVPICVFSFAGPRVGNTRFKERLAQ-LG 289
+T+ GHSLG+A+ +L A DI ++ DG +F PR+GN F + Q +G
Sbjct: 139 VTVIGHSLGAAMGLLCAMDI-----ELRMDGGLYKTYLFGL--PRLGNPTFASFVDQKIG 191
Query: 290 VKVLRVVNIHDKIPEAP 306
K ++N D +P P
Sbjct: 192 DKFHSIINGRDWVPTVP 208
>pdb|3UUE|A Chain A, Crystal Structure Of Mono- And Diacylglycerol Lipase From
Malassezia Globosa
Length = 279
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 231 ITITGHSLGSALAILSAYDIAETGVDVMDDGQAVPICVFSFAGPRVGNTRFKERLAQ-LG 289
+T+ GHSLG+A+ +L A DI ++ DG +F PR+GN F + Q +G
Sbjct: 140 VTVIGHSLGAAMGLLCAMDI-----ELRMDGGLYKTYLFGL--PRLGNPTFASFVDQKIG 192
Query: 290 VKVLRVVNIHDKIPEAP 306
K ++N D +P P
Sbjct: 193 DKFHSIINGRDWVPTVP 209
>pdb|2ORY|A Chain A, Crystal Structure Of M37 Lipase
pdb|2ORY|B Chain B, Crystal Structure Of M37 Lipase
Length = 346
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 206 KRSAREHVLEEVRRLVSQYQNENLS------ITITGHSLGSALAILSAYDIAET-GVDVM 258
K + H+ E + + Q+ NE + I +TGHS G AL+ A + + GV +
Sbjct: 138 KLKPKSHIPGE-NKTILQFLNEKIGPEGKAKICVTGHSKGGALSSTLALWLKDIQGVKL- 195
Query: 259 DDGQAVPICVFSFAGPRVGNTRFKERLAQ-LGVKVLRVVNIHDKIPEA 305
Q + I FAGP GN F + LG + R+ N D +P A
Sbjct: 196 --SQNIDISTIPFAGPTAGNADFADYFDDCLGDQCTRIANSLDIVPYA 241
>pdb|3O0D|A Chain A, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|B Chain B, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|C Chain C, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|D Chain D, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|E Chain E, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|F Chain F, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|G Chain G, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
Length = 301
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 73/198 (36%), Gaps = 53/198 (26%)
Query: 131 GYIAVSNDEMSAHLGRRDITIAWRGTKTKLEWIADFMYFLRPIT--------LKKIPCPD 182
GY+AV + + I + RGT + + I D P+T C D
Sbjct: 70 GYLAVDH-------ASKQIYLVIRGTHSLEDVITDIRIMQAPLTNFDLAANISSTATCDD 122
Query: 183 PRVKVESGFLNLYTNKDQSSQICKRSAREHVLEEVRRLVSQYQNENLSITITGHSLGSAL 242
V +GF+ Y N + ++ ++ QY + I +TGHSLG A
Sbjct: 123 --CLVHNGFIQSYNN-----------TYNQIGPKLDSVIEQY--PDYQIAVTGHSLGGAA 167
Query: 243 AILSAYDIAETGVDVMDDGQAVPICVFSFAGPRVGNTRFKERLAQLGV------------ 290
A+L ++ G D + V + P VGN F + +L
Sbjct: 168 ALLFGINLKVNGHDPL---------VVTLGQPIVGNAGFANWVDKLFFGQENPDVSKVSK 218
Query: 291 --KVLRVVNIHDKIPEAP 306
K+ R+ + D +P+ P
Sbjct: 219 DRKLYRITHRGDIVPQVP 236
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted
Jellyroll Protein Shown By Crystal Structure Analysis
Length = 214
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 16 IPKEPERKLADIWHDIHGVDDWDGMLDPLDPLLRS-ELIRYGEMVQACHDAFDFEPFSKY 74
IP P + + ++W+ GVDDW G + +PL + ++Y +F FEPF+ Y
Sbjct: 114 IPSTPGKIMMNLWNGT-GVDDWLGSYNGANPLYAEYDWVKY--TSNQTGGSF-FEPFNSY 169
Query: 75 CGSC-----KYAPSEFFECLGMAQH 94
Y+ F C A +
Sbjct: 170 NSGTWEKADGYSNGGVFNCTWRANN 194
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4-
Glucanohydrolase Cpa16m-84
pdb|1AJK|B Chain B, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4-
Glucanohydrolase Cpa16m-84
Length = 214
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 16 IPKEPERKLADIWHDIHGVDDWDGMLDPLDPLLRS-ELIRYGEMVQACHDAFDFEPFSKY 74
IP P + + ++W+ GVDDW G + +PL + ++Y +F FEPF+ Y
Sbjct: 89 IPSTPGKIMMNLWNGT-GVDDWLGSYNGANPLYAEYDWVKY--TSNQTGGSF-FEPFNSY 144
Query: 75 CGSC-----KYAPSEFFECLGMAQH 94
Y+ F C A +
Sbjct: 145 NSGTWEKADGYSNGGVFNCTWRANN 169
>pdb|1AJO|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4-
Glucanohydrolase Cpa16m-127
pdb|1AJO|B Chain B, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4-
Glucanohydrolase Cpa16m-127
Length = 214
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 16 IPKEPERKLADIWHDIHGVDDWDGMLDPLDPLLRS-ELIRYGEMVQACHDAFDFEPFSKY 74
IP P + + ++W+ GVDDW G + +PL + ++Y +F FEPF+ Y
Sbjct: 46 IPSTPGKIMMNLWNGT-GVDDWLGSYNGANPLYAEYDWVKY--TSNQTGGSF-FEPFNSY 101
Query: 75 CGSC-----KYAPSEFFECLGMAQH 94
Y+ F C A +
Sbjct: 102 NSGTWEKADGYSNGGVFNCTWRANN 126
>pdb|3G7N|A Chain A, Crystal Structure Of A Triacylglycerol Lipase From
Penicillium Expansum At 1.3
pdb|3G7N|B Chain B, Crystal Structure Of A Triacylglycerol Lipase From
Penicillium Expansum At 1.3
Length = 258
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Query: 146 RRDITIAWRGTKTKLEWIADFMYFLRPITLKKIPCPDPRVKVESGFLNLYTNKDQSSQIC 205
++ I + RG+ T +++ D L L + P VK+ G ++
Sbjct: 55 KKTIAVIMRGSTTITDFVNDIDIALITPELSGVTFPS-DVKIMRGVHRPWS--------- 104
Query: 206 KRSAREHVLEEVRRLVSQYQNENLSITITGHSLGSALAILSAYDIAE 252
+ + ++ EV+ L+++Y + L GHSLG AL ++ +A+
Sbjct: 105 --AVHDTIITEVKALIAKYPDYTLEAV--GHSLGGALTSIAHVALAQ 147
>pdb|2VT4|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Cyanopindolol
pdb|2VT4|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Cyanopindolol
pdb|2VT4|C Chain C, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Cyanopindolol
pdb|2VT4|D Chain D, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Cyanopindolol
pdb|2YCW|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Carazolol
pdb|2YCW|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Carazolol
pdb|2YCX|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Cyanopindolol
pdb|2YCX|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Cyanopindolol
pdb|2YCZ|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Iodocyanopindolol
pdb|2YCZ|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Iodocyanopindolol
pdb|2YCY|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Cyanopindolol
pdb|2YCY|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Cyanopindolol
pdb|4GPO|A Chain A, Oligomeic Turkey Beta1-adrenergic G Protein-coupled
Receptor
pdb|4GPO|B Chain B, Oligomeic Turkey Beta1-adrenergic G Protein-coupled
Receptor
Length = 313
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 106 YNINLPNIFQRSLRPDAWSHTA-NWIGY 132
+ +N+ N+F R L PD W A NW+GY
Sbjct: 247 FLVNIVNVFNRDLVPD-WLFVAFNWLGY 273
>pdb|2Y00|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Partial Agonist Dobutamine (Crystal
Dob92)
pdb|2Y00|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Partial Agonist Dobutamine (Crystal
Dob92)
pdb|2Y01|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Partial Agonist Dobutamine (Crystal
Dob102)
pdb|2Y01|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Partial Agonist Dobutamine (Crystal
Dob102)
pdb|2Y02|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Agonist Carmoterol
pdb|2Y02|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Agonist Carmoterol
pdb|2Y03|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Agonist Isoprenaline
pdb|2Y03|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Agonist Isoprenaline
pdb|2Y04|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Partial Agonist Salbutamol
pdb|2Y04|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Partial Agonist Salbutamol
pdb|4AMI|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Biased Agonist Bucindolol
pdb|4AMI|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Biased Agonist Bucindolol
pdb|4AMJ|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Biased Agonist Carvedilol
pdb|4AMJ|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Biased Agonist Carvedilol
Length = 315
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 106 YNINLPNIFQRSLRPDAWSHTA-NWIGY 132
+ +N+ N+F R L PD W A NW+GY
Sbjct: 249 FLVNIVNVFNRDLVPD-WLFVAFNWLGY 275
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 147 RDITIAWRGTKTKLEWIADFMYFLRPITLKKIP--CPDPRVKVESGFLNLYTNKDQSSQI 204
+ + +A K+ + I D + L+ I L P C PR+ S +LN + K+Q S
Sbjct: 197 KQLNLASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAK 256
Query: 205 CKRSAREHVLEEVRRLVSQYQNENL 229
C S + VR ++ ENL
Sbjct: 257 CSGSGK-----PVRSIICPTTGENL 276
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,187,243
Number of Sequences: 62578
Number of extensions: 611344
Number of successful extensions: 1487
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1450
Number of HSP's gapped (non-prelim): 26
length of query: 431
length of database: 14,973,337
effective HSP length: 102
effective length of query: 329
effective length of database: 8,590,381
effective search space: 2826235349
effective search space used: 2826235349
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)