Query 048561
Match_columns 382
No_of_seqs 311 out of 4057
Neff 9.3
Searched_HMMs 13730
Date Mon Mar 25 18:33:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048561.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/048561hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 4.4E-42 3.2E-46 318.3 13.2 295 19-321 4-307 (313)
2 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 2.6E-30 1.9E-34 238.5 8.7 251 91-343 49-308 (313)
3 d1xkua_ c.10.2.7 (A:) Decorin 99.9 6.8E-26 5E-30 207.8 16.9 261 50-320 10-286 (305)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.9 1.3E-24 9.5E-29 199.2 18.3 264 68-341 11-287 (305)
5 d1p9ag_ c.10.2.7 (G:) von Will 99.9 5E-24 3.6E-28 191.6 14.3 196 69-319 12-208 (266)
6 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 3.8E-24 2.7E-28 194.2 11.2 204 92-297 32-239 (284)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 3.1E-23 2.3E-27 188.1 13.3 219 98-320 17-239 (284)
8 d1p9ag_ c.10.2.7 (G:) von Will 99.9 1.5E-21 1.1E-25 175.3 20.0 178 67-297 31-209 (266)
9 d2omza2 c.10.2.1 (A:33-416) In 99.9 2.9E-22 2.1E-26 188.5 15.8 105 212-323 264-368 (384)
10 d2omza2 c.10.2.1 (A:33-416) In 99.8 5.9E-21 4.3E-25 179.4 13.9 238 67-322 44-345 (384)
11 d1h6ua2 c.10.2.1 (A:36-262) In 99.8 1.1E-18 7.9E-23 152.5 15.6 205 70-315 22-226 (227)
12 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 7.2E-19 5.3E-23 154.9 6.4 222 70-323 11-240 (242)
13 d1jl5a_ c.10.2.6 (A:) Leucine 99.7 5.1E-17 3.7E-21 150.0 18.6 96 68-177 39-134 (353)
14 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 6.7E-17 4.9E-21 139.2 15.7 54 234-291 155-208 (210)
15 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 1.8E-16 1.3E-20 136.4 17.8 165 91-315 45-209 (210)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 1.4E-16 1E-20 138.8 17.2 187 66-292 40-226 (227)
17 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 8.4E-17 6.1E-21 136.6 15.3 171 50-248 8-183 (192)
18 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 7.1E-18 5.2E-22 148.4 8.7 213 50-290 8-232 (242)
19 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.3E-16 9.6E-21 136.2 16.2 177 72-311 23-199 (199)
20 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 4E-17 2.9E-21 138.6 8.1 173 95-322 11-186 (192)
21 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.4E-15 1E-19 129.7 17.4 160 67-288 40-199 (199)
22 d1jl5a_ c.10.2.6 (A:) Leucine 99.6 4.6E-15 3.4E-19 136.6 20.2 96 92-199 38-133 (353)
23 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.5 1E-17 7.3E-22 160.1 -11.7 108 68-175 3-124 (460)
24 d2astb2 c.10.1.3 (B:2136-2419) 99.5 1.3E-15 9.5E-20 137.2 0.2 206 89-321 43-261 (284)
25 d1dcea3 c.10.2.2 (A:444-567) R 99.5 1.7E-13 1.2E-17 107.2 10.7 101 70-177 1-104 (124)
26 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 1.8E-15 1.3E-19 140.0 -2.9 112 211-322 186-318 (344)
27 d1dcea3 c.10.2.2 (A:444-567) R 99.4 2.1E-13 1.5E-17 106.7 8.7 101 95-199 1-103 (124)
28 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 2.7E-13 2E-17 111.2 8.7 82 68-153 19-100 (162)
29 d2astb2 c.10.1.3 (B:2136-2419) 99.4 3.7E-14 2.7E-18 127.6 1.9 206 66-298 45-261 (284)
30 d1a9na_ c.10.2.4 (A:) Spliceso 99.3 1.5E-12 1.1E-16 106.7 9.1 111 88-203 14-128 (162)
31 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.3 7.2E-15 5.2E-19 135.8 -5.7 232 67-299 31-318 (344)
32 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.3 8.7E-15 6.3E-19 139.4 -8.7 134 186-320 255-411 (460)
33 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 2.2E-11 1.6E-15 98.9 10.9 91 85-176 24-116 (156)
34 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 1.2E-11 9E-16 100.4 8.0 92 228-319 24-116 (156)
35 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 8.2E-14 5.9E-18 118.3 -5.9 66 108-176 40-106 (198)
36 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 9.2E-14 6.7E-18 118.0 -5.6 58 117-176 24-83 (198)
37 d1koha1 c.10.2.3 (A:201-362) m 98.1 3.5E-07 2.5E-11 73.9 1.8 82 231-312 61-152 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 98.1 1.8E-07 1.3E-11 75.6 -0.4 79 211-289 65-152 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.3 2.5E-05 1.8E-09 62.9 1.0 91 233-323 13-117 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.2 0.0001 7.4E-09 59.1 4.2 86 68-153 16-113 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 96.3 0.00029 2.1E-08 56.1 -0.2 80 68-147 18-109 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.0 0.00024 1.7E-08 56.7 -2.0 111 87-197 12-143 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00 E-value=4.4e-42 Score=318.31 Aligned_cols=295 Identities=25% Similarity=0.419 Sum_probs=253.7
Q ss_pred hHHHHHHHHHHHHhCcCCCCCCCCCCC-CCCCC--CcCceeeCCCCCCCcccceeEEEcCCCCCCCC-CCccccCCCCCC
Q 048561 19 LAAIYPIIQTFKNTITSDPFNITSTWI-GSDIC--KYKGFYCGHPPDNLTAIALASIDFNGFELAAP-TLDGFIDQLPDL 94 (382)
Q Consensus 19 ~~~~~~aL~~~k~~~~~~~~~~~~~W~-~~~~C--~w~gv~c~~~~~~~~~~~l~~L~L~~~~l~~~-~~~~~~~~l~~L 94 (382)
.+.|++||++||+++. |+ ..+++|. ++|+| .|+||+|+..+. ..+|+.|+|+++++.+. .++..++++++|
T Consensus 4 ~~~e~~aLl~~k~~~~-~~-~~l~sW~~~~d~C~~~w~gv~C~~~~~---~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L 78 (313)
T d1ogqa_ 4 NPQDKQALLQIKKDLG-NP-TTLSSWLPTTDCCNRTWLGVLCDTDTQ---TYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CHHHHHHHHHHHHHTT-CC-GGGTTCCTTSCTTTTCSTTEEECCSSS---CCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CHHHHHHHHHHHHHCC-CC-CcCCCCCCCCCCCCCcCCCeEEeCCCC---cEEEEEEECCCCCCCCCCCCChHHhcCccc
Confidence 4556779999999998 44 3588996 67899 599999986432 34799999999999884 256789999999
Q ss_pred CEEEcCC-CcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEecCCCCCCCCCcccc-cCCCCEEeCCC
Q 048561 95 SLFHANS-NKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDIRFNFFTGSVPPQVF-MQTLDVLFLNN 172 (382)
Q Consensus 95 ~~L~l~~-n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~-l~~L~~L~L~~ 172 (382)
++|+|++ |.++|.+|.+|+++++|++|+|++|++.+..+..+..+.+|+++++++|.+.+.+|..+. ++.|+++++++
T Consensus 79 ~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~ 158 (313)
T d1ogqa_ 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred cccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeeccc
Confidence 9999997 899999999999999999999999999988888899999999999999999989988877 89999999999
Q ss_pred CcCCCcCCcCCCC-Ccc-hhhhccCcccccccchhHHHhhhhHHHHHhhccccCCCCchhcccCcCCCccccCCccCCCC
Q 048561 173 NNFMQKLPQNLGS-TPA-LYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGP 250 (382)
Q Consensus 173 n~l~~~~p~~~~~-~~L-~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 250 (382)
|.+.+.+|..+.. ..+ +.+++++|++++..+..+..+ ....+++.++...+..|..+..+++++.+++++|.+.+.
T Consensus 159 n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l--~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~ 236 (313)
T d1ogqa_ 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL--NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC--CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCB
T ss_pred ccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccc
Confidence 9999999988776 444 678999999998888888775 344678888888888888889999999999999999866
Q ss_pred CCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcccccCcccCCcccCCCCCCEEEccCCC-CCCC
Q 048561 251 LPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLSNNYFTGVGPLCRKLIKNGVLDVNRNC-IHYL 321 (382)
Q Consensus 251 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~-l~~l 321 (382)
++ .++.+++|+.|++++|+++|.+|.+++.+++|++|+|++|+|+|.+|.++.+++|+.+++++|+ +++.
T Consensus 237 ~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~ 307 (313)
T d1ogqa_ 237 LG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp GG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred cc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccccCC
Confidence 54 5778899999999999999999999999999999999999999877877888888888888876 4443
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.96 E-value=2.6e-30 Score=238.55 Aligned_cols=251 Identities=26% Similarity=0.333 Sum_probs=221.5
Q ss_pred CCCCCEEEcCCCcCcc--cCCcccCCCCCCCEEEeec-CCCCccCcccccCCCCCcEEEecCCCCCCCCCcccc-cCCCC
Q 048561 91 LPDLSLFHANSNKFSG--TISPKLAQLPYLYELDISN-NKFSGTFPVAILGKNDLSFLDIRFNFFTGSVPPQVF-MQTLD 166 (382)
Q Consensus 91 l~~L~~L~l~~n~l~~--~~p~~l~~l~~L~~L~Ls~-n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~-l~~L~ 166 (382)
..+++.|+|+++.+.+ .+|..++++++|++|+|++ |.++|.+|..|+++++|++|+|++|++.+..+..+. +.+|+
T Consensus 49 ~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~ 128 (313)
T d1ogqa_ 49 TYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred cEEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhc
Confidence 3578999999999987 5889999999999999997 899999999999999999999999999977777665 88999
Q ss_pred EEeCCCCcCCCcCCcCCCC-CcchhhhccCcccccccchhHHHhhhhHHHHHhhccccCCCCchhcccCcCCCccccCCc
Q 048561 167 VLFLNNNNFMQKLPQNLGS-TPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNN 245 (382)
Q Consensus 167 ~L~L~~n~l~~~~p~~~~~-~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 245 (382)
++++++|.+.+.+|..+.. ..++++++++|.+.+.+|..+..+...++.+++++|++++..+..+..+..+ .++++.+
T Consensus 129 ~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~ 207 (313)
T d1ogqa_ 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRN 207 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSS
T ss_pred ccccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-ccccccc
Confidence 9999999999999998887 7899999999999999999998874445788899999999888888877655 6999999
Q ss_pred cCCCCCCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcccccCcccC-CcccCCCCCCEEEccCCCCCC-CCC
Q 048561 246 RLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLSNNYFTGVG-PLCRKLIKNGVLDVNRNCIHY-LPD 323 (382)
Q Consensus 246 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~l~~L~~L~L~~N~l~~-lp~ 323 (382)
.+.+.+|..+..+++++.+++++|.+.+.++ .+..+++|+.|+|++|+|++.. ..+.++++|++|+|++|+|++ +|+
T Consensus 208 ~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~ 286 (313)
T d1ogqa_ 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred ccccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC
Confidence 9999999999999999999999999997655 6888899999999999999754 478999999999999999994 786
Q ss_pred c--ccccchhhhccCCCCCCCC
Q 048561 324 Q--RSTHECALFFLQPRFCFYP 343 (382)
Q Consensus 324 ~--~~~~~~~~~~~np~~c~~~ 343 (382)
. ...+....+.+|+.+|+.+
T Consensus 287 ~~~L~~L~~l~l~~N~~l~g~p 308 (313)
T d1ogqa_ 287 GGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp STTGGGSCGGGTCSSSEEESTT
T ss_pred cccCCCCCHHHhCCCccccCCC
Confidence 3 3456667788999999864
No 3
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.93 E-value=6.8e-26 Score=207.83 Aligned_cols=261 Identities=22% Similarity=0.253 Sum_probs=163.8
Q ss_pred CCcCceeeCCCCCCC----cccceeEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeec
Q 048561 50 CKYKGFYCGHPPDNL----TAIALASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISN 125 (382)
Q Consensus 50 C~w~gv~c~~~~~~~----~~~~l~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~ 125 (382)
|.|+++.|+...-.. -...++.|++++|+++. +.+..|.++++|++|++++|.+....|..|.++++|++|++++
T Consensus 10 c~~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~~-l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~ 88 (305)
T d1xkua_ 10 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 88 (305)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ecCCEEEecCCCCCccCCCCCCCCCEEECcCCcCCC-cChhHhhccccccccccccccccccchhhhhCCCccCEecccC
Confidence 789999997632110 02467788888888776 4455677888888888888888766677778888888888888
Q ss_pred CCCCccCcccccCCCCCcEEEecCCCCCCCCCcccc--cCCCCEEeCCCCcCCC--cCCcCCCC-CcchhhhccCccccc
Q 048561 126 NKFSGTFPVAILGKNDLSFLDIRFNFFTGSVPPQVF--MQTLDVLFLNNNNFMQ--KLPQNLGS-TPALYLTFANNKFTG 200 (382)
Q Consensus 126 n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~--l~~L~~L~L~~n~l~~--~~p~~~~~-~~L~~L~l~~n~l~~ 200 (382)
|+++ .+|..+ ...++.|+++.|.+. .++...+ ...++.++...|.... ..+..+.. .+++++++.+|.+.
T Consensus 89 n~l~-~l~~~~--~~~l~~L~~~~n~l~-~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~- 163 (305)
T d1xkua_ 89 NQLK-ELPEKM--PKTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT- 163 (305)
T ss_dssp SCCS-BCCSSC--CTTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-
T ss_pred CccC-cCccch--hhhhhhhhccccchh-hhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-
Confidence 8877 555443 356778888888777 4443332 4566677776664432 22222322 45666667666665
Q ss_pred ccchhHHHhhhhHHHHHhhccccCCCCchhcccCcCCCccccCCccCCCCCCcCCCCCCCCCEEeCcCCcCcccCchhhc
Q 048561 201 SIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLC 280 (382)
Q Consensus 201 ~lp~~l~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 280 (382)
.++..+ .++++.|++++|...+..+..+.+++.++.|++++|.+++..+..+.++++|++|+|++|+|+ .+|.++.
T Consensus 164 ~l~~~~---~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~ 239 (305)
T d1xkua_ 164 TIPQGL---PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLA 239 (305)
T ss_dssp SCCSSC---CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTT
T ss_pred ccCccc---CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccc
Confidence 444332 245566666666666666666666666666666666666555556666666666666666666 4556666
Q ss_pred CCCCCCEEEcccccCcccCC-------cccCCCCCCEEEccCCCCCC
Q 048561 281 ALDNLVNLSLSNNYFTGVGP-------LCRKLIKNGVLDVNRNCIHY 320 (382)
Q Consensus 281 ~l~~L~~L~L~~N~l~~~~~-------~~~~l~~L~~L~L~~N~l~~ 320 (382)
.+++|++|+|++|+|+.+.. ......+|+.|+|++|.++.
T Consensus 240 ~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~ 286 (305)
T d1xkua_ 240 DHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 286 (305)
T ss_dssp TCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred cccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCcc
Confidence 66666666666666665432 12344556666666666654
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.92 E-value=1.3e-24 Score=199.17 Aligned_cols=264 Identities=19% Similarity=0.190 Sum_probs=210.1
Q ss_pred ceeEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEe
Q 048561 68 ALASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDI 147 (382)
Q Consensus 68 ~l~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 147 (382)
..+.+|=++++++. + |..+ .+++++|++++|+++...+.+|.++++|++|++++|.+....|..|.++++|++|++
T Consensus 11 ~~~~~~C~~~~L~~-l-P~~l--~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l 86 (305)
T d1xkua_ 11 HLRVVQCSDLGLEK-V-PKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 86 (305)
T ss_dssp ETTEEECTTSCCCS-C-CCSC--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred cCCEEEecCCCCCc-c-CCCC--CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecc
Confidence 34567777877876 3 3334 268999999999999555557999999999999999999777888999999999999
Q ss_pred cCCCCCCCCCcccccCCCCEEeCCCCcCCCcCCcCCCC-CcchhhhccCcccc--cccchhHHHhhhhHHHHHhhccccC
Q 048561 148 RFNFFTGSVPPQVFMQTLDVLFLNNNNFMQKLPQNLGS-TPALYLTFANNKFT--GSIPRSIGKLSSTLIEVLFLNNLLT 224 (382)
Q Consensus 148 s~n~l~~~~p~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~l~~n~l~--~~lp~~l~~l~~~L~~L~l~~n~l~ 224 (382)
++|+++ .+|... ...++.|.+.+|.+.+..+..+.. .....+....|... ...+..+..+ ++|+.+++++|.+.
T Consensus 87 ~~n~l~-~l~~~~-~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l-~~L~~l~l~~n~l~ 163 (305)
T d1xkua_ 87 SKNQLK-ELPEKM-PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM-KKLSYIRIADTNIT 163 (305)
T ss_dssp CSSCCS-BCCSSC-CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGC-TTCCEEECCSSCCC
T ss_pred cCCccC-cCccch-hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccc-cccCccccccCCcc
Confidence 999998 677543 468999999999987655544444 44455666655432 2334455555 67888899999887
Q ss_pred CCCchhcccCcCCCccccCCccCCCCCCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcccccCcccCCcccC
Q 048561 225 GCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLSNNYFTGVGPLCRK 304 (382)
Q Consensus 225 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 304 (382)
. ++.. .+++|+.|++++|.+++..+..+..++.++.|++++|.+.+..+.++..+++|++|+|++|+|+.++..+..
T Consensus 164 ~-l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~~l~~ 240 (305)
T d1xkua_ 164 T-IPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLAD 240 (305)
T ss_dssp S-CCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTT
T ss_pred c-cCcc--cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccccccccccc
Confidence 4 4433 368999999999999988888999999999999999999988888999999999999999999998888999
Q ss_pred CCCCCEEEccCCCCCCCCCcc----------cccchhhhccCCCCCC
Q 048561 305 LIKNGVLDVNRNCIHYLPDQR----------STHECALFFLQPRFCF 341 (382)
Q Consensus 305 l~~L~~L~L~~N~l~~lp~~~----------~~~~~~~~~~np~~c~ 341 (382)
+++|+.|+|++|+|+.++... ..+..+.+.+||+.+.
T Consensus 241 l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~ 287 (305)
T d1xkua_ 241 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYW 287 (305)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGG
T ss_pred ccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCccC
Confidence 999999999999999987521 2334455667777654
No 5
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=5e-24 Score=191.61 Aligned_cols=196 Identities=20% Similarity=0.122 Sum_probs=122.0
Q ss_pred eeEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEec
Q 048561 69 LASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDIR 148 (382)
Q Consensus 69 l~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls 148 (382)
...++-++++++. +|..+. +++++|+|++|.+++..+.+|.++++|++|+|++|+|+ .++ .+..+++|++|+|+
T Consensus 12 ~~~v~C~~~~L~~--iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 12 HLEVNCDKRNLTA--LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLS 85 (266)
T ss_dssp CCEEECTTSCCSS--CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEEECC
T ss_pred CeEEEccCCCCCe--eCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccc-cccccccccccccc
Confidence 3445677777665 232221 46777777777777555556777777777777777776 444 24566777777777
Q ss_pred CCCCCCCCCcccc-cCCCCEEeCCCCcCCCcCCcCCCCCcchhhhccCcccccccchhHHHhhhhHHHHHhhccccCCCC
Q 048561 149 FNFFTGSVPPQVF-MQTLDVLFLNNNNFMQKLPQNLGSTPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCL 227 (382)
Q Consensus 149 ~n~l~~~~p~~~~-l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~~~~ 227 (382)
+|+++ .++..+. +++|+.|++++|.+.+. .
T Consensus 86 ~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~------------------------------------------------~ 116 (266)
T d1p9ag_ 86 HNQLQ-SLPLLGQTLPALTVLDVSFNRLTSL------------------------------------------------P 116 (266)
T ss_dssp SSCCS-SCCCCTTTCTTCCEEECCSSCCCCC------------------------------------------------C
T ss_pred ccccc-cccccccccccccccccccccccee------------------------------------------------e
Confidence 77776 3333333 66666666666654321 1
Q ss_pred chhcccCcCCCccccCCccCCCCCCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcccccCcccCCcccCCCC
Q 048561 228 PYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLSNNYFTGVGPLCRKLIK 307 (382)
Q Consensus 228 ~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~ 307 (382)
+..+..+.++++|++++|.++...+..+..+++|+.+++++|++++..+..+..+++|++|+|++|+|+.+++.+..+++
T Consensus 117 ~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~ 196 (266)
T d1p9ag_ 117 LGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHL 196 (266)
T ss_dssp SSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCC
T ss_pred ccccccccccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCcccChhHCCCCC
Confidence 22334555666677777776655555566666777777777777655556666667777777777777766656666667
Q ss_pred CCEEEccCCCCC
Q 048561 308 NGVLDVNRNCIH 319 (382)
Q Consensus 308 L~~L~L~~N~l~ 319 (382)
|+.|+|++|.+.
T Consensus 197 L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 197 LPFAFLHGNPWL 208 (266)
T ss_dssp CSEEECCSCCBC
T ss_pred CCEEEecCCCCC
Confidence 777777776654
No 6
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=3.8e-24 Score=194.19 Aligned_cols=204 Identities=19% Similarity=0.176 Sum_probs=107.8
Q ss_pred CCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEec-CCCCCCCCC-cccc-cCCCCEE
Q 048561 92 PDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDIR-FNFFTGSVP-PQVF-MQTLDVL 168 (382)
Q Consensus 92 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls-~n~l~~~~p-~~~~-l~~L~~L 168 (382)
+.+++|+|++|+|+...+.+|.++++|++|++++|.+.+..+..+..+..+++++.. .+.++ .++ ..+. +++|++|
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~-~l~~~~~~~l~~L~~L 110 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR-SVDPATFHGLGRLHTL 110 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCC-CCCTTTTTTCTTCCEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccc-cccchhhcccccCCEE
Confidence 356677777777764444556677777777777777765555555666666666554 33444 333 3333 5667777
Q ss_pred eCCCCcCCCcCCcCCCC-CcchhhhccCcccccccchhHHHhhhhHHHHHhhccccCCCCchhcccCcCCCccccCCccC
Q 048561 169 FLNNNNFMQKLPQNLGS-TPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRL 247 (382)
Q Consensus 169 ~L~~n~l~~~~p~~~~~-~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 247 (382)
++++|.+....+..+.. .+|+.+++++|.+++..+..+... .+|+.|++++|.+.+..+..|.++++|+++++++|.+
T Consensus 111 ~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~-~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l 189 (284)
T d1ozna_ 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDL-GNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189 (284)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC-TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred ecCCcccccccccccchhcccchhhhccccccccChhHhccc-cchhhcccccCcccccchhhhccccccchhhhhhccc
Confidence 77776665444444443 445555555555542212222222 2333444444444433444445555555555555555
Q ss_pred CCCCCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcccccCcc
Q 048561 248 TGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLSNNYFTG 297 (382)
Q Consensus 248 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 297 (382)
++..|..|..+++|++|++++|.+.+..+.++..+++|++|++++|.+.+
T Consensus 190 ~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 190 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred cccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 54445555555555555555555554444455555555555555555443
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=3.1e-23 Score=188.06 Aligned_cols=219 Identities=16% Similarity=0.114 Sum_probs=173.8
Q ss_pred EcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEecCCCCCCCCCcccc-cCCCCEEeCC-CCcC
Q 048561 98 HANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDIRFNFFTGSVPPQVF-MQTLDVLFLN-NNNF 175 (382)
Q Consensus 98 ~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~-l~~L~~L~L~-~n~l 175 (382)
+.++.+++ .+|..+. +++++|+|++|+|+...+..|.++++|++|++++|.+....+..+. ...++.+... .+.+
T Consensus 17 ~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~ 93 (284)
T d1ozna_ 17 SCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93 (284)
T ss_dssp ECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTC
T ss_pred EcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccccc
Confidence 44455566 5666553 5789999999999955556799999999999999999844443333 6778888764 5566
Q ss_pred CCcCCcCCCC-CcchhhhccCcccccccchhHHHhhhhHHHHHhhccccCCCCchhcccCcCCCccccCCccCCCCCCcC
Q 048561 176 MQKLPQNLGS-TPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGPLPCS 254 (382)
Q Consensus 176 ~~~~p~~~~~-~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~ 254 (382)
....+..+.. .+|++|++++|.+....+..+... .+|+.+++++|.+++..+..|..+++|+.|++++|.+++..+..
T Consensus 94 ~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~-~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~ 172 (284)
T d1ozna_ 94 RSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGL-AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERA 172 (284)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTC-TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTT
T ss_pred ccccchhhcccccCCEEecCCcccccccccccchh-cccchhhhccccccccChhHhccccchhhcccccCcccccchhh
Confidence 6666777776 789999999998874444444444 77888889999988777778888889999999999988777788
Q ss_pred CCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcccccCcccCC-cccCCCCCCEEEccCCCCCC
Q 048561 255 LGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLSNNYFTGVGP-LCRKLIKNGVLDVNRNCIHY 320 (382)
Q Consensus 255 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~ 320 (382)
|.++++|+++++++|++++..|.+|..+++|++|++++|+++++++ .+..+++|++|++++|++..
T Consensus 173 f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 173 FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred hccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 8888999999999999988888888888999999999999988765 57788889999999988775
No 8
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.5e-21 Score=175.27 Aligned_cols=178 Identities=21% Similarity=0.216 Sum_probs=140.0
Q ss_pred cceeEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEE
Q 048561 67 IALASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLD 146 (382)
Q Consensus 67 ~~l~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 146 (382)
..++.|+|++|.+++ +.++.|.++++|++|++++|.++ .++ .++.+++|++|+|++|+++ ..+..+..+++|++|+
T Consensus 31 ~~l~~L~Ls~N~i~~-l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~ 106 (266)
T d1p9ag_ 31 KDTTILHLSENLLYT-FSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLD 106 (266)
T ss_dssp TTCCEEECTTSCCSE-EEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEE
T ss_pred cCCCEEECcCCcCCC-cCHHHhhcccccccccccccccc-ccc-ccccccccccccccccccc-cccccccccccccccc
Confidence 478999999999998 56678999999999999999998 454 4688999999999999998 5677899999999999
Q ss_pred ecCCCCCCCCCcccc-cCCCCEEeCCCCcCCCcCCcCCCCCcchhhhccCcccccccchhHHHhhhhHHHHHhhccccCC
Q 048561 147 IRFNFFTGSVPPQVF-MQTLDVLFLNNNNFMQKLPQNLGSTPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTG 225 (382)
Q Consensus 147 Ls~n~l~~~~p~~~~-l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~~ 225 (382)
+++|.+.+..+..+. +.++++|++++|.+....
T Consensus 107 l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~---------------------------------------------- 140 (266)
T d1p9ag_ 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLP---------------------------------------------- 140 (266)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCC----------------------------------------------
T ss_pred ccccccceeeccccccccccccccccccccceec----------------------------------------------
Confidence 999999844333333 788888888888765321
Q ss_pred CCchhcccCcCCCccccCCccCCCCCCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcccccCcc
Q 048561 226 CLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLSNNYFTG 297 (382)
Q Consensus 226 ~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 297 (382)
+..+..+++++.+++++|++++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|.+..
T Consensus 141 --~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~C 209 (266)
T d1p9ag_ 141 --PGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (266)
T ss_dssp --TTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred --cccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCC
Confidence 223445667777777777777666666777777888888888877 677777777778888888877654
No 9
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.88 E-value=2.9e-22 Score=188.53 Aligned_cols=105 Identities=21% Similarity=0.194 Sum_probs=72.3
Q ss_pred hHHHHHhhccccCCCCchhcccCcCCCccccCCccCCCCCCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcc
Q 048561 212 TLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLS 291 (382)
Q Consensus 212 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 291 (382)
+|+.++++++.+.+.. .+..+..++.++++.|.+++ ...+..+++++.|++++|++++. + .+..+++|++|+++
T Consensus 264 ~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l-~-~l~~l~~L~~L~L~ 337 (384)
T d2omza2 264 KLTELKLGANQISNIS--PLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDI-S-PVSSLTKLQRLFFA 337 (384)
T ss_dssp TCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSCC-G-GGGGCTTCCEEECC
T ss_pred cCCEeeccCcccCCCC--cccccccccccccccccccc--ccccchhcccCeEECCCCCCCCC-c-ccccCCCCCEEECC
Confidence 4444444444443221 23344444444444444442 12355678899999999999854 3 37788999999999
Q ss_pred cccCcccCCcccCCCCCCEEEccCCCCCCCCC
Q 048561 292 NNYFTGVGPLCRKLIKNGVLDVNRNCIHYLPD 323 (382)
Q Consensus 292 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~lp~ 323 (382)
+|+|+++. .+..+++|++|++++|+|+++++
T Consensus 338 ~n~l~~l~-~l~~l~~L~~L~l~~N~l~~l~~ 368 (384)
T d2omza2 338 NNKVSDVS-SLANLTNINWLSAGHNQISDLTP 368 (384)
T ss_dssp SSCCCCCG-GGGGCTTCCEEECCSSCCCBCGG
T ss_pred CCCCCCCh-hHcCCCCCCEEECCCCcCCCChh
Confidence 99998754 68889999999999999998864
No 10
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.84 E-value=5.9e-21 Score=179.45 Aligned_cols=238 Identities=20% Similarity=0.254 Sum_probs=175.7
Q ss_pred cceeEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEE
Q 048561 67 IALASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLD 146 (382)
Q Consensus 67 ~~l~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 146 (382)
.+++.|+++++++.. +. .++.+++|++|++++|++++ ++ .++++++|++|++++|++.+ ++ .+..+++|+.|+
T Consensus 44 ~~l~~L~l~~~~I~~--l~-gl~~L~nL~~L~Ls~N~l~~-l~-~l~~L~~L~~L~L~~n~i~~-i~-~l~~l~~L~~L~ 116 (384)
T d2omza2 44 DQVTTLQADRLGIKS--ID-GVEYLNNLTQINFSNNQLTD-IT-PLKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLT 116 (384)
T ss_dssp TTCCEEECCSSCCCC--CT-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCC--cc-ccccCCCCCEEeCcCCcCCC-Cc-cccCCccccccccccccccc-cc-cccccccccccc
Confidence 368999999999986 33 37889999999999999995 44 49999999999999999984 43 388999999999
Q ss_pred ecCCCCCCCCCc---------------------------------------------------------------cc-cc
Q 048561 147 IRFNFFTGSVPP---------------------------------------------------------------QV-FM 162 (382)
Q Consensus 147 Ls~n~l~~~~p~---------------------------------------------------------------~~-~l 162 (382)
++++.+++..+. .. .+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (384)
T d2omza2 117 LFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKL 196 (384)
T ss_dssp CCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccc
Confidence 999876631110 01 13
Q ss_pred CCCCEEeCCCCcCCCcCCcCCCCCcchhhhccCcccccccchhHHHhhhhHHHHHhhccccCCCCchhcccCcCCCcccc
Q 048561 163 QTLDVLFLNNNNFMQKLPQNLGSTPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDA 242 (382)
Q Consensus 163 ~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 242 (382)
++++.+++++|.+++..+. ....++++|++++|.++ .++ .+..+ ++|+.+++++|.+++.. .+..+++|+.|++
T Consensus 197 ~~~~~l~l~~n~i~~~~~~-~~~~~L~~L~l~~n~l~-~~~-~l~~l-~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l 270 (384)
T d2omza2 197 TNLESLIATNNQISDITPL-GILTNLDELSLNGNQLK-DIG-TLASL-TNLTDLDLANNQISNLA--PLSGLTKLTELKL 270 (384)
T ss_dssp TTCSEEECCSSCCCCCGGG-GGCTTCCEEECCSSCCC-CCG-GGGGC-TTCSEEECCSSCCCCCG--GGTTCTTCSEEEC
T ss_pred cccceeeccCCccCCCCcc-cccCCCCEEECCCCCCC-Ccc-hhhcc-cccchhccccCccCCCC--cccccccCCEeec
Confidence 5566666776666554332 22256677777777766 333 34444 66777777777776433 3667777777777
Q ss_pred CCccCCCCCCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcccccCcccCCcccCCCCCCEEEccCCCCCCCC
Q 048561 243 SNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLSNNYFTGVGPLCRKLIKNGVLDVNRNCIHYLP 322 (382)
Q Consensus 243 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~lp 322 (382)
++|.+++. + .+..+..++.+++.+|.+.+ + ..+..+++++.|++++|+++++. .+..+++|+.|++++|+|++++
T Consensus 271 ~~~~l~~~-~-~~~~~~~l~~l~~~~n~l~~-~-~~~~~~~~l~~L~ls~n~l~~l~-~l~~l~~L~~L~L~~n~l~~l~ 345 (384)
T d2omza2 271 GANQISNI-S-PLAGLTALTNLELNENQLED-I-SPISNLKNLTYLTLYFNNISDIS-PVSSLTKLQRLFFANNKVSDVS 345 (384)
T ss_dssp CSSCCCCC-G-GGTTCTTCSEEECCSSCCSC-C-GGGGGCTTCSEEECCSSCCSCCG-GGGGCTTCCEEECCSSCCCCCG
T ss_pred cCcccCCC-C-cccccccccccccccccccc-c-cccchhcccCeEECCCCCCCCCc-ccccCCCCCEEECCCCCCCCCh
Confidence 77777643 2 25566777788888887764 2 34677899999999999999875 4788999999999999999976
No 11
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.78 E-value=1.1e-18 Score=152.46 Aligned_cols=205 Identities=18% Similarity=0.210 Sum_probs=142.5
Q ss_pred eEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEecC
Q 048561 70 ASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDIRF 149 (382)
Q Consensus 70 ~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~ 149 (382)
..++++.+++.+. ..++.+.+|+.|++.+|+++ .++ .+..+++|++|++++|.+++..+ +..+++|+++++++
T Consensus 22 ~~~~l~~~~~~d~---~~~~~l~~L~~L~l~~~~i~-~l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~ 94 (227)
T d1h6ua2 22 IKIAAGKSNVTDT---VTQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSG 94 (227)
T ss_dssp HHHHTTCSSTTSE---ECHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCS
T ss_pred HHHHhCCCCcCCc---CCHHHcCCcCEEECCCCCCC-cch-hHhcCCCCcEeecCCceeecccc--cccccccccccccc
Confidence 4455666666652 12456778888888888887 343 57788888888888888874332 77888888888888
Q ss_pred CCCCCCCCcccccCCCCEEeCCCCcCCCcCCcCCCCCcchhhhccCcccccccchhHHHhhhhHHHHHhhccccCCCCch
Q 048561 150 NFFTGSVPPQVFMQTLDVLFLNNNNFMQKLPQNLGSTPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPY 229 (382)
Q Consensus 150 n~l~~~~p~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~~~~~~ 229 (382)
|.++ .++....+++|+.+.++++...+..+ ......+..+.++++ .+.. ..
T Consensus 95 n~~~-~i~~l~~l~~L~~l~l~~~~~~~~~~-~~~~~~~~~l~~~~~-------------------------~~~~--~~ 145 (227)
T d1h6ua2 95 NPLK-NVSAIAGLQSIKTLDLTSTQITDVTP-LAGLSNLQVLYLDLN-------------------------QITN--IS 145 (227)
T ss_dssp CCCS-CCGGGTTCTTCCEEECTTSCCCCCGG-GTTCTTCCEEECCSS-------------------------CCCC--CG
T ss_pred cccc-ccccccccccccccccccccccccch-hccccchhhhhchhh-------------------------hhch--hh
Confidence 8877 56655557888888888776653221 111122333333333 2221 12
Q ss_pred hcccCcCCCccccCCccCCCCCCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcccccCcccCCcccCCCCCC
Q 048561 230 ELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLSNNYFTGVGPLCRKLIKNG 309 (382)
Q Consensus 230 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~ 309 (382)
.+...++|+.|++++|.+++. ..++++++|+.|++++|++++ ++ .+..+++|++|+|++|+++++. .+..+++|+
T Consensus 146 ~~~~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~i~-~l~~l~~L~ 220 (227)
T d1h6ua2 146 PLAGLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISDVS-PLANTSNLF 220 (227)
T ss_dssp GGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCBCG-GGTTCTTCC
T ss_pred hhccccccccccccccccccc--hhhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCCCc-ccccCCCCC
Confidence 356677889999999988743 237788999999999999984 44 3778899999999999998765 478899999
Q ss_pred EEEccC
Q 048561 310 VLDVNR 315 (382)
Q Consensus 310 ~L~L~~ 315 (382)
.|++++
T Consensus 221 ~L~lsn 226 (227)
T d1h6ua2 221 IVTLTN 226 (227)
T ss_dssp EEEEEE
T ss_pred EEEeeC
Confidence 999863
No 12
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=7.2e-19 Score=154.90 Aligned_cols=222 Identities=13% Similarity=0.040 Sum_probs=143.7
Q ss_pred eEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCc-ccccCCCCCcEEEec
Q 048561 70 ASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFP-VAILGKNDLSFLDIR 148 (382)
Q Consensus 70 ~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p-~~l~~l~~L~~L~Ls 148 (382)
+.++.++.+++. ++.. + .+++++|++++|.++...+.+|.++++|++|++++|.+...++ ..|..+++++++++.
T Consensus 11 ~~i~c~~~~l~~-iP~~-l--~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~ 86 (242)
T d1xwdc1 11 RVFLCQESKVTE-IPSD-L--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 86 (242)
T ss_dssp SEEEEESCSCSS-CCSC-S--CSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEE
T ss_pred CEEEEeCCCCCC-cCCC-C--CCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccc
Confidence 356667777775 3332 2 2579999999999986555678999999999999999875544 467889999999886
Q ss_pred C-CCCCCCCCcccc-cCCCCEEeCCCCcCCCcCCcCCCC--CcchhhhccCcccccccchhHHHhhhhHHHHHhhccccC
Q 048561 149 F-NFFTGSVPPQVF-MQTLDVLFLNNNNFMQKLPQNLGS--TPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLT 224 (382)
Q Consensus 149 ~-n~l~~~~p~~~~-l~~L~~L~L~~n~l~~~~p~~~~~--~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~ 224 (382)
. |.+....+..+. +++|+++++++|.+....+..+.. ..+..+...++.+.
T Consensus 87 ~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~------------------------- 141 (242)
T d1xwdc1 87 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH------------------------- 141 (242)
T ss_dssp CCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCC-------------------------
T ss_pred ccccccccccccccccccccccccchhhhcccccccccccccccccccccccccc-------------------------
Confidence 4 666644444444 899999999999886433322211 22222222222222
Q ss_pred CCCchhcccC-cCCCccccCCccCCCCCCcCCCCCCCCCEE-eCcCCcCcccCchhhcCCCCCCEEEcccccCcccCC-c
Q 048561 225 GCLPYELGFL-REARVFDASNNRLTGPLPCSLGCLEKIERL-NLSGNLLYGQVPEVLCALDNLVNLSLSNNYFTGVGP-L 301 (382)
Q Consensus 225 ~~~~~~~~~l-~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L-~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~ 301 (382)
...+..+..+ ..++.|++++|+++......+ ...+++++ .+++|+++...+..|..+++|++|+|++|+|+.+++ .
T Consensus 142 ~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~-~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~ 220 (242)
T d1xwdc1 142 TIERNSFVGLSFESVILWLNKNGIQEIHNCAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG 220 (242)
T ss_dssp EECTTSSTTSBSSCEEEECCSSCCCEECTTTT-TTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSS
T ss_pred cccccccccccccceeeecccccccccccccc-cchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHH
Confidence 2222334444 367788888888884433333 44555444 567788884444567888899999999998887765 3
Q ss_pred ccCCCCCCEEEccCCCCCCCCC
Q 048561 302 CRKLIKNGVLDVNRNCIHYLPD 323 (382)
Q Consensus 302 ~~~l~~L~~L~L~~N~l~~lp~ 323 (382)
+.++++|+.+++ +.+..+|.
T Consensus 221 ~~~l~~L~~l~~--~~l~~lp~ 240 (242)
T d1xwdc1 221 LENLKKLRARST--YNLKKLPT 240 (242)
T ss_dssp CTTCCEEESSSE--ESSSCSCC
T ss_pred HcCCcccccCcC--CCCCcCCC
Confidence 455555554444 44666664
No 13
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.73 E-value=5.1e-17 Score=150.02 Aligned_cols=96 Identities=19% Similarity=0.288 Sum_probs=72.2
Q ss_pred ceeEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEe
Q 048561 68 ALASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDI 147 (382)
Q Consensus 68 ~l~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 147 (382)
+++.|||++++++. +|. ..++|++|++++|+|+ .+|.. +.+|+.|++++|+++ .++. + .+.|++|++
T Consensus 39 ~l~~LdLs~~~L~~--lp~---~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~-l--p~~L~~L~L 105 (353)
T d1jl5a_ 39 QAHELELNNLGLSS--LPE---LPPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSD-L--PPLLEYLGV 105 (353)
T ss_dssp TCSEEECTTSCCSC--CCS---CCTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCS-C--CTTCCEEEC
T ss_pred CCCEEEeCCCCCCC--CCC---CCCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccc-hhhh-h--ccccccccc
Confidence 47788999988876 343 2568899999999888 67754 357888899998887 4442 1 146889999
Q ss_pred cCCCCCCCCCcccccCCCCEEeCCCCcCCC
Q 048561 148 RFNFFTGSVPPQVFMQTLDVLFLNNNNFMQ 177 (382)
Q Consensus 148 s~n~l~~~~p~~~~l~~L~~L~L~~n~l~~ 177 (382)
++|.+. .+|....+++|++|++++|.+..
T Consensus 106 ~~n~l~-~lp~~~~l~~L~~L~l~~~~~~~ 134 (353)
T d1jl5a_ 106 SNNQLE-KLPELQNSSFLKIIDVDNNSLKK 134 (353)
T ss_dssp CSSCCS-SCCCCTTCTTCCEEECCSSCCSC
T ss_pred cccccc-cccchhhhccceeeccccccccc
Confidence 999888 77765558889999998887754
No 14
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71 E-value=6.7e-17 Score=139.23 Aligned_cols=54 Identities=28% Similarity=0.388 Sum_probs=25.1
Q ss_pred CcCCCccccCCccCCCCCCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcc
Q 048561 234 LREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLS 291 (382)
Q Consensus 234 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 291 (382)
+++|+++++++|.+++ ++ .+..+++|++|++++|.|+ .++ .+..+++|++|+|+
T Consensus 155 l~~L~~l~l~~n~l~~-i~-~l~~l~~L~~L~Ls~N~i~-~l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 155 LTKLDTLSLEDNQISD-IV-PLAGLTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLELF 208 (210)
T ss_dssp CTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC-BCG-GGTTCTTCSEEEEE
T ss_pred cccccccccccccccc-cc-cccCCCCCCEEECCCCCCC-CCh-hhcCCCCCCEEEcc
Confidence 3445555555555542 22 1444555555555555554 233 24444455555443
No 15
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71 E-value=1.8e-16 Score=136.42 Aligned_cols=165 Identities=22% Similarity=0.283 Sum_probs=114.2
Q ss_pred CCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEecCCCCCCCCCcccccCCCCEEeC
Q 048561 91 LPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDIRFNFFTGSVPPQVFMQTLDVLFL 170 (382)
Q Consensus 91 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~l~~L~~L~L 170 (382)
+..|+.|++++|.++. ++ .+..+++|++|++++|++++ ++ .+..+++|++|++++|+++ .++....+++|+.|++
T Consensus 45 L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~-~l~~l~~l~~L~~L~l 119 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVK-DLSSLKDLKKLKSLSL 119 (210)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC-CGGGGTTCTTCCEEEC
T ss_pred hcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccC-cc-ccccCcccccccccccccc-cccccccccccccccc
Confidence 4566777777777663 22 36667777777777777773 33 3567777777777777777 4554444677777777
Q ss_pred CCCcCCCcCCcCCCCCcchhhhccCcccccccchhHHHhhhhHHHHHhhccccCCCCchhcccCcCCCccccCCccCCCC
Q 048561 171 NNNNFMQKLPQNLGSTPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGP 250 (382)
Q Consensus 171 ~~n~l~~~~p~~~~~~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 250 (382)
++|.+.. ...+.++++++.+++++|.+++
T Consensus 120 ~~~~~~~--------------------------------------------------~~~l~~l~~l~~l~~~~n~l~~- 148 (210)
T d1h6ta2 120 EHNGISD--------------------------------------------------INGLVHLPQLESLYLGNNKITD- 148 (210)
T ss_dssp TTSCCCC--------------------------------------------------CGGGGGCTTCCEEECCSSCCCC-
T ss_pred ccccccc--------------------------------------------------cccccccccccccccccccccc-
Confidence 7665321 0124455667778888887763
Q ss_pred CCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcccccCcccCCcccCCCCCCEEEccC
Q 048561 251 LPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLSNNYFTGVGPLCRKLIKNGVLDVNR 315 (382)
Q Consensus 251 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~ 315 (382)
+..+..+++|+.+++++|++++ ++. +..+++|++|+|++|+|+.+ +.+..+++|++|+|++
T Consensus 149 -~~~~~~l~~L~~l~l~~n~l~~-i~~-l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 149 -ITVLSRLTKLDTLSLEDNQISD-IVP-LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFS 209 (210)
T ss_dssp -CGGGGGCTTCSEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEE
T ss_pred -cccccccccccccccccccccc-ccc-ccCCCCCCEEECCCCCCCCC-hhhcCCCCCCEEEccC
Confidence 2345667888899999988874 433 77888899999999888865 4578888888888864
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71 E-value=1.4e-16 Score=138.76 Aligned_cols=187 Identities=23% Similarity=0.349 Sum_probs=145.3
Q ss_pred ccceeEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEE
Q 048561 66 AIALASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFL 145 (382)
Q Consensus 66 ~~~l~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L 145 (382)
..+++.|++.++++.. +. .+.++++|++|++++|.+++.. .+..+++|+++++++|.++ .++ .+.++++|+++
T Consensus 40 l~~L~~L~l~~~~i~~--l~-~l~~l~~L~~L~ls~n~i~~~~--~l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l 112 (227)
T d1h6ua2 40 LDGITTLSAFGTGVTT--IE-GVQYLNNLIGLELKDNQITDLA--PLKNLTKITELELSGNPLK-NVS-AIAGLQSIKTL 112 (227)
T ss_dssp HHTCCEEECTTSCCCC--CT-TGGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEE
T ss_pred cCCcCEEECCCCCCCc--ch-hHhcCCCCcEeecCCceeeccc--ccccccccccccccccccc-ccc-ccccccccccc
Confidence 3478999999999986 34 4889999999999999998543 3899999999999999998 444 58899999999
Q ss_pred EecCCCCCCCCCcccccCCCCEEeCCCCcCCCcCCcCCCCCcchhhhccCcccccccchhHHHhhhhHHHHHhhccccCC
Q 048561 146 DIRFNFFTGSVPPQVFMQTLDVLFLNNNNFMQKLPQNLGSTPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTG 225 (382)
Q Consensus 146 ~Ls~n~l~~~~p~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~~ 225 (382)
+++++... .++.....+.++.+.++.+.+....+ .....++++|++.+|.+. .
T Consensus 113 ~l~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~L~~L~l~~n~~~-------------------------~ 165 (227)
T d1h6ua2 113 DLTSTQIT-DVTPLAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVS-------------------------D 165 (227)
T ss_dssp ECTTSCCC-CCGGGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCC-------------------------C
T ss_pred cccccccc-ccchhccccchhhhhchhhhhchhhh-hccccccccccccccccc-------------------------c
Confidence 99999987 44444557889999999888754322 122244555555554443 2
Q ss_pred CCchhcccCcCCCccccCCccCCCCCCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEccc
Q 048561 226 CLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLSN 292 (382)
Q Consensus 226 ~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 292 (382)
. ..+.++++|++|++++|++++ ++ .++.+++|++|++++|++++ ++. +..+++|+.|++++
T Consensus 166 ~--~~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~-i~~-l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 166 L--TPLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISD-VSP-LANTSNLFIVTLTN 226 (227)
T ss_dssp C--GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCB-CGG-GTTCTTCCEEEEEE
T ss_pred c--hhhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCC-Ccc-cccCCCCCEEEeeC
Confidence 1 236778899999999999984 44 37889999999999999984 443 78899999999974
No 17
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.71 E-value=8.4e-17 Score=136.60 Aligned_cols=171 Identities=18% Similarity=0.230 Sum_probs=82.5
Q ss_pred CCcCceeeCCCCCCC----cccceeEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeec
Q 048561 50 CKYKGFYCGHPPDNL----TAIALASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISN 125 (382)
Q Consensus 50 C~w~gv~c~~~~~~~----~~~~l~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~ 125 (382)
|.|..|.|+...-.. -..+++.|+|++|.|++.+....|+++++|+.|++++|.+....+..+..+++|++|+|++
T Consensus 8 C~~~~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EcCCEEEEeCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 566666675421000 0123444555555544322333444455555555555555444444444445555555555
Q ss_pred CCCCccCcccccCCCCCcEEEecCCCCCCCCCcccccCCCCEEeCCCCcCCCcCCcCCCC-CcchhhhccCcccccccch
Q 048561 126 NKFSGTFPVAILGKNDLSFLDIRFNFFTGSVPPQVFMQTLDVLFLNNNNFMQKLPQNLGS-TPALYLTFANNKFTGSIPR 204 (382)
Q Consensus 126 n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~l~~L~~L~L~~n~l~~~~p~~~~~-~~L~~L~l~~n~l~~~lp~ 204 (382)
|+|++..+..|.++++|++|+|++|+|+ +..+..|.. .+++++++++|.+......
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~-----------------------~i~~~~f~~l~~L~~l~L~~N~~~~~~~~ 144 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQIS-----------------------CVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCC-----------------------EECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred ccccccCHHHHhCCCcccccccCCcccc-----------------------ccCHHHhcCCcccccccccccccccccch
Confidence 5554333344444555555555555544 444444433 4444444544444422221
Q ss_pred hHHHhhhhHHHHHhhccccCCCCchhcccCcCCCccccCCccCC
Q 048561 205 SIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLT 248 (382)
Q Consensus 205 ~l~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 248 (382)
.+ +...++.+.+..+.+....|. .+.+++.++++.|.+.
T Consensus 145 ~~--~~~~l~~~~l~~~~~~c~~p~---~l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 145 AW--FAEWLRKKSLNGGAARCGAPS---KVRDVQIKDLPHSEFK 183 (192)
T ss_dssp HH--HHHHHHHHCCSGGGCBBCSST---TTTTSBGGGSCTTTCC
T ss_pred HH--HhhhhhhhcccCCCeEeCCCh---hhcCCEeeecCHhhCc
Confidence 11 123466666766766655554 3455667777777765
No 18
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=7.1e-18 Score=148.43 Aligned_cols=213 Identities=17% Similarity=0.132 Sum_probs=145.5
Q ss_pred CCcCceeeCCCCCC-C---cccceeEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccC-CcccCCCCCCCEEEee
Q 048561 50 CKYKGFYCGHPPDN-L---TAIALASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTI-SPKLAQLPYLYELDIS 124 (382)
Q Consensus 50 C~w~gv~c~~~~~~-~---~~~~l~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-p~~l~~l~~L~~L~Ls 124 (382)
|..+.+.|....-. + -...++.|++++|.+.. +....|.++++|++|++++|.+...+ +.+|..++.++++++.
T Consensus 8 C~~~~i~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~-l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~ 86 (242)
T d1xwdc1 8 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV-IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 86 (242)
T ss_dssp ECSSEEEEESCSCSSCCSCSCSCCSEEEEESCCCCE-ECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEE
T ss_pred CcCCEEEEeCCCCCCcCCCCCCCCCEEECcCCcCCc-cChhHhhccchhhhhhhccccccceeecccccccccccccccc
Confidence 67788888743211 0 12478999999999987 56667999999999999999987544 4568889999999987
Q ss_pred c-CCCCccCcccccCCCCCcEEEecCCCCCCCCCcccc---cCCCCEEeCCCCcCCCcCCcCCCC--CcchhhhccCccc
Q 048561 125 N-NKFSGTFPVAILGKNDLSFLDIRFNFFTGSVPPQVF---MQTLDVLFLNNNNFMQKLPQNLGS--TPALYLTFANNKF 198 (382)
Q Consensus 125 ~-n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~---l~~L~~L~L~~n~l~~~~p~~~~~--~~L~~L~l~~n~l 198 (382)
. |.+....+..|.++++|++|++++|.+. ..+.... +..+..+...++.+....+..+.. ..++.+++.+|++
T Consensus 87 ~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~-~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l 165 (242)
T d1xwdc1 87 KANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI 165 (242)
T ss_dssp CCTTCCEECTTSEECCTTCCEEEEESCCCC-SCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCC
T ss_pred ccccccccccccccccccccccccchhhhc-ccccccccccccccccccccccccccccccccccccccceeeecccccc
Confidence 5 6787677778899999999999999998 5554443 455556666777766555555544 3455566666666
Q ss_pred ccccchhHHHhhhhHHHHHhhccccCCCCchhcccCcCC-CccccCCccCCCCCCcCCCCCCCCCEEeCcCCcCcccCch
Q 048561 199 TGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREA-RVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPE 277 (382)
Q Consensus 199 ~~~lp~~l~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 277 (382)
+ .++.. .+ ...++ +.+++++|.++...+..|.++++|++|++++|+|+...+.
T Consensus 166 ~-~i~~~------------------------~~-~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~ 219 (242)
T d1xwdc1 166 Q-EIHNC------------------------AF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSY 219 (242)
T ss_dssp C-EECTT------------------------TT-TTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSS
T ss_pred c-ccccc------------------------cc-cchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHH
Confidence 5 23221 22 22333 3345677777744445577788888888888888744344
Q ss_pred hhcCCCCCCEEEc
Q 048561 278 VLCALDNLVNLSL 290 (382)
Q Consensus 278 ~~~~l~~L~~L~L 290 (382)
.+..+++|+.+++
T Consensus 220 ~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 220 GLENLKKLRARST 232 (242)
T ss_dssp SCTTCCEEESSSE
T ss_pred HHcCCcccccCcC
Confidence 4555555555544
No 19
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71 E-value=1.3e-16 Score=136.17 Aligned_cols=177 Identities=20% Similarity=0.253 Sum_probs=108.3
Q ss_pred EEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEecCCC
Q 048561 72 IDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDIRFNF 151 (382)
Q Consensus 72 L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 151 (382)
..++.+.+++. + ....+.++++|++++|.++. + +.+..+++|++|++++|++++. +. +.++++|++|++++|.
T Consensus 23 ~~l~~~~~~~~-~--~~~~l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~-~~-l~~l~~L~~L~l~~n~ 95 (199)
T d2omxa2 23 TVLGKTNVTDT-V--SQTDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQ 95 (199)
T ss_dssp HHTTCSSTTSE-E--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSC
T ss_pred HHhCCCCCCCc-c--CHHHhcCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCc-cc-ccCCcccccccccccc
Confidence 34455555441 1 12346677777777777763 3 2466677777777777777743 32 6777777777777777
Q ss_pred CCCCCCcccccCCCCEEeCCCCcCCCcCCcCCCCCcchhhhccCcccccccchhHHHhhhhHHHHHhhccccCCCCchhc
Q 048561 152 FTGSVPPQVFMQTLDVLFLNNNNFMQKLPQNLGSTPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYEL 231 (382)
Q Consensus 152 l~~~~p~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~~~~~~~~ 231 (382)
+. .++....++.|+.|++++|.+... ..+
T Consensus 96 ~~-~~~~l~~l~~L~~L~l~~~~~~~~--------------------------------------------------~~~ 124 (199)
T d2omxa2 96 IA-DITPLANLTNLTGLTLFNNQITDI--------------------------------------------------DPL 124 (199)
T ss_dssp CC-CCGGGTTCTTCSEEECCSSCCCCC--------------------------------------------------GGG
T ss_pred cc-cccccccccccccccccccccccc--------------------------------------------------ccc
Confidence 76 555433466777777766654210 113
Q ss_pred ccCcCCCccccCCccCCCCCCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcccccCcccCCcccCCCCCCEE
Q 048561 232 GFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLSNNYFTGVGPLCRKLIKNGVL 311 (382)
Q Consensus 232 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L 311 (382)
..+++|+.|++++|.+.. ++ .+..+++|+.|++.+|++++ ++ .+..+++|++|++++|+++++ +.+..+++|+.|
T Consensus 125 ~~l~~L~~L~l~~n~l~~-~~-~l~~~~~L~~L~l~~n~l~~-l~-~l~~l~~L~~L~ls~N~i~~i-~~l~~L~~L~~L 199 (199)
T d2omxa2 125 KNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLNFSSNQVTD-LK-PLANLTTLERLDISSNKVSDI-SVLAKLTNLESL 199 (199)
T ss_dssp TTCTTCSEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEE
T ss_pred chhhhhHHhhhhhhhhcc-cc-cccccccccccccccccccC-Cc-cccCCCCCCEEECCCCCCCCC-ccccCCCCCCcC
Confidence 345566777777776652 32 45666777777777777763 33 356677777777777777654 345666666654
No 20
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.67 E-value=4e-17 Score=138.61 Aligned_cols=173 Identities=16% Similarity=0.148 Sum_probs=95.7
Q ss_pred CEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccC-cccccCCCCCcEEEecCCCCCCCCCcccc-cCCCCEEeCCC
Q 048561 95 SLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTF-PVAILGKNDLSFLDIRFNFFTGSVPPQVF-MQTLDVLFLNN 172 (382)
Q Consensus 95 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~-l~~L~~L~L~~ 172 (382)
++++.++++++ .+|..+. +++++|+|++|+|++.+ +..|.++++|++|++++|.+.+..+..+. +++|++|++++
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 35556666655 4554432 45566666666665322 33445555566666665555533333332 45555555555
Q ss_pred CcCCCcCCcCCCCCcchhhhccCcccccccchhHHHhhhhHHHHHhhccccCCCCchhcccCcCCCccccCCccCCCCCC
Q 048561 173 NNFMQKLPQNLGSTPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGPLP 252 (382)
Q Consensus 173 n~l~~~~p~~~~~~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p 252 (382)
|++.. ..+..|.++++|++|+|++|.|++..+
T Consensus 88 N~l~~------------------------------------------------l~~~~F~~l~~L~~L~L~~N~l~~i~~ 119 (192)
T d1w8aa_ 88 NKIKE------------------------------------------------ISNKMFLGLHQLKTLNLYDNQISCVMP 119 (192)
T ss_dssp CCCCE------------------------------------------------ECSSSSTTCTTCCEEECCSSCCCEECT
T ss_pred ccccc------------------------------------------------cCHHHHhCCCcccccccCCccccccCH
Confidence 54431 223455667777777777777776666
Q ss_pred cCCCCCCCCCEEeCcCCcCcccCch-hhcCCCCCCEEEcccccCcccCCcccCCCCCCEEEccCCCCCCCC
Q 048561 253 CSLGCLEKIERLNLSGNLLYGQVPE-VLCALDNLVNLSLSNNYFTGVGPLCRKLIKNGVLDVNRNCIHYLP 322 (382)
Q Consensus 253 ~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~lp 322 (382)
.+|..+++|++|+|++|.+...... ++. ..++.+.+..+.++...| ..+..++.++|+.|.++..+
T Consensus 120 ~~f~~l~~L~~l~L~~N~~~~~~~~~~~~--~~l~~~~l~~~~~~c~~p--~~l~~~~l~~L~~n~l~C~~ 186 (192)
T d1w8aa_ 120 GSFEHLNSLTSLNLASNPFNCNCHLAWFA--EWLRKKSLNGGAARCGAP--SKVRDVQIKDLPHSEFKCSS 186 (192)
T ss_dssp TSSTTCTTCCEEECTTCCBCCSGGGHHHH--HHHHHHCCSGGGCBBCSS--TTTTTSBGGGSCTTTCCCCC
T ss_pred HHhcCCcccccccccccccccccchHHHh--hhhhhhcccCCCeEeCCC--hhhcCCEeeecCHhhCcCCC
Confidence 6777777788888887777643221 111 224445556666665333 23445556666666665433
No 21
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.66 E-value=1.4e-15 Score=129.66 Aligned_cols=160 Identities=23% Similarity=0.360 Sum_probs=120.8
Q ss_pred cceeEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEE
Q 048561 67 IALASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLD 146 (382)
Q Consensus 67 ~~l~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 146 (382)
..++.|+++++++.. +. .++.+++|++|++++|.+++. + .++++++|++|++++|.+. .++ .+.++++|++|+
T Consensus 40 ~~l~~L~l~~~~i~~--l~-~l~~l~nL~~L~Ls~N~l~~~-~-~l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~ 112 (199)
T d2omxa2 40 DQVTTLQADRLGIKS--ID-GVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLT 112 (199)
T ss_dssp TTCCEEECTTSCCCC--CT-TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEE
T ss_pred cCCCEEECCCCCCCC--cc-ccccCCCcCcCccccccccCc-c-cccCCcccccccccccccc-ccc-cccccccccccc
Confidence 368999999999986 33 378899999999999999854 3 3899999999999999997 454 488999999999
Q ss_pred ecCCCCCCCCCcccccCCCCEEeCCCCcCCCcCCcCCCCCcchhhhccCcccccccchhHHHhhhhHHHHHhhccccCCC
Q 048561 147 IRFNFFTGSVPPQVFMQTLDVLFLNNNNFMQKLPQNLGSTPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGC 226 (382)
Q Consensus 147 Ls~n~l~~~~p~~~~l~~L~~L~L~~n~l~~~~p~~~~~~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~~~ 226 (382)
+++|.+. .++....+++|+.|++++|.+.. ++
T Consensus 113 l~~~~~~-~~~~~~~l~~L~~L~l~~n~l~~-~~---------------------------------------------- 144 (199)
T d2omxa2 113 LFNNQIT-DIDPLKNLTNLNRLELSSNTISD-IS---------------------------------------------- 144 (199)
T ss_dssp CCSSCCC-CCGGGTTCTTCSEEECCSSCCCC-CG----------------------------------------------
T ss_pred ccccccc-cccccchhhhhHHhhhhhhhhcc-cc----------------------------------------------
Confidence 9999988 45544458899999998887642 11
Q ss_pred CchhcccCcCCCccccCCccCCCCCCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEE
Q 048561 227 LPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNL 288 (382)
Q Consensus 227 ~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 288 (382)
.+..+++|+.|++.+|++++ ++ .++++++|++|++++|+++ .++ .+..+++|++|
T Consensus 145 ---~l~~~~~L~~L~l~~n~l~~-l~-~l~~l~~L~~L~ls~N~i~-~i~-~l~~L~~L~~L 199 (199)
T d2omxa2 145 ---ALSGLTSLQQLNFSSNQVTD-LK-PLANLTTLERLDISSNKVS-DIS-VLAKLTNLESL 199 (199)
T ss_dssp ---GGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC-CCG-GGGGCTTCSEE
T ss_pred ---cccccccccccccccccccC-Cc-cccCCCCCCEEECCCCCCC-CCc-cccCCCCCCcC
Confidence 23445567777777777763 32 3667777777777777776 343 36667777664
No 22
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.65 E-value=4.6e-15 Score=136.61 Aligned_cols=96 Identities=22% Similarity=0.205 Sum_probs=77.3
Q ss_pred CCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEecCCCCCCCCCcccccCCCCEEeCC
Q 048561 92 PDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDIRFNFFTGSVPPQVFMQTLDVLFLN 171 (382)
Q Consensus 92 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~l~~L~~L~L~ 171 (382)
.+++.|++++++++ .+|+. .++|++|++++|+|+ .+|..+ .+|++|++++|+++ .++.. .+.|++|+++
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l--p~~L~~L~L~ 106 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL--PPLLEYLGVS 106 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC--CTTCCEEECC
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh--cccccccccc
Confidence 37899999999998 67853 578999999999999 778654 68999999999998 66542 3579999999
Q ss_pred CCcCCCcCCcCCCCCcchhhhccCcccc
Q 048561 172 NNNFMQKLPQNLGSTPALYLTFANNKFT 199 (382)
Q Consensus 172 ~n~l~~~~p~~~~~~~L~~L~l~~n~l~ 199 (382)
+|.+. .+|.......|++++++++.+.
T Consensus 107 ~n~l~-~lp~~~~l~~L~~L~l~~~~~~ 133 (353)
T d1jl5a_ 107 NNQLE-KLPELQNSSFLKIIDVDNNSLK 133 (353)
T ss_dssp SSCCS-SCCCCTTCTTCCEEECCSSCCS
T ss_pred ccccc-cccchhhhccceeecccccccc
Confidence 99986 4555433378899999888776
No 23
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=1e-17 Score=160.14 Aligned_cols=108 Identities=19% Similarity=0.266 Sum_probs=66.1
Q ss_pred ceeEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcc----cCCcccCCCCCCCEEEeecCCCCcc----Cccccc-C
Q 048561 68 ALASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSG----TISPKLAQLPYLYELDISNNKFSGT----FPVAIL-G 138 (382)
Q Consensus 68 ~l~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~----~~p~~l~~l~~L~~L~Ls~n~l~~~----~p~~l~-~ 138 (382)
+|+.||++++++++..+...+..++++++|+|++|.++. .+...+..+++|++|||++|.|+.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 577788888777764344455667777777777777662 2334456677777777777777521 122222 2
Q ss_pred CCCCcEEEecCCCCCCCC----Ccccc-cCCCCEEeCCCCcC
Q 048561 139 KNDLSFLDIRFNFFTGSV----PPQVF-MQTLDVLFLNNNNF 175 (382)
Q Consensus 139 l~~L~~L~Ls~n~l~~~~----p~~~~-l~~L~~L~L~~n~l 175 (382)
..+|++|+|++|+++... +..+. +++|++|++++|.+
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i 124 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLL 124 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBC
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccc
Confidence 246777777777776321 12222 56777777777765
No 24
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=1.3e-15 Score=137.22 Aligned_cols=206 Identities=15% Similarity=0.064 Sum_probs=122.9
Q ss_pred CCCCCCCEEEcCCCcCccc-CCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEecCC-CCCCC-CCccc-ccCC
Q 048561 89 DQLPDLSLFHANSNKFSGT-ISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDIRFN-FFTGS-VPPQV-FMQT 164 (382)
Q Consensus 89 ~~l~~L~~L~l~~n~l~~~-~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n-~l~~~-~p~~~-~l~~ 164 (382)
....+|++|+++++.++.. +...+..+++|++|+|+++.+++..+..+..+++|++|+++++ .++.. +.... .+++
T Consensus 43 ~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~ 122 (284)
T d2astb2 43 FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 122 (284)
T ss_dssp CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTT
T ss_pred ccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHh
Confidence 3456788888888877633 3444677888888888888887666677778888888888885 44411 11111 2678
Q ss_pred CCEEeCCCCc-CCCc-CCcCCC--CCcchhhhccCcccccccchhHHHhhhhHHHHHhhccccCCC-CchhcccCcCCCc
Q 048561 165 LDVLFLNNNN-FMQK-LPQNLG--STPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGC-LPYELGFLREARV 239 (382)
Q Consensus 165 L~~L~L~~n~-l~~~-~p~~~~--~~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~ 239 (382)
|++|++++|. ++.. +...+. ...++.|+++++.. .++.. +...+.++++|++
T Consensus 123 L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~-----------------------~i~~~~l~~l~~~~~~L~~ 179 (284)
T d2astb2 123 LDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK-----------------------NLQKSDLSTLVRRCPNLVH 179 (284)
T ss_dssp CCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG-----------------------GSCHHHHHHHHHHCTTCSE
T ss_pred ccccccccccccccccchhhhcccccccchhhhccccc-----------------------ccccccccccccccccccc
Confidence 8888888763 2211 001111 12344444443211 01100 1112345678888
Q ss_pred cccCCc-cCCCCCCcCCCCCCCCCEEeCcCC-cCcccCchhhcCCCCCCEEEcccccCccc-CCc-ccCCCCCCEEEccC
Q 048561 240 FDASNN-RLTGPLPCSLGCLEKIERLNLSGN-LLYGQVPEVLCALDNLVNLSLSNNYFTGV-GPL-CRKLIKNGVLDVNR 315 (382)
Q Consensus 240 L~Ls~n-~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~-~~~l~~L~~L~L~~ 315 (382)
|++++| .+++.....+..+++|++|+++++ .+++.....+..+++|+.|+++++ ++.. ... ...+++| ++..
T Consensus 180 L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~-~~d~~l~~l~~~lp~L---~i~~ 255 (284)
T d2astb2 180 LDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHL---QINC 255 (284)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTS---EESC
T ss_pred cccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC-CCHHHHHHHHHhCccc---cccC
Confidence 888875 466556666777888888888884 566555566777788888888877 3321 111 2344444 4566
Q ss_pred CCCCCC
Q 048561 316 NCIHYL 321 (382)
Q Consensus 316 N~l~~l 321 (382)
+.++.+
T Consensus 256 ~~ls~~ 261 (284)
T d2astb2 256 SHFTTI 261 (284)
T ss_dssp CCSCCT
T ss_pred ccCCCC
Confidence 777664
No 25
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.46 E-value=1.7e-13 Score=107.17 Aligned_cols=101 Identities=21% Similarity=0.249 Sum_probs=82.4
Q ss_pred eEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEecC
Q 048561 70 ASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDIRF 149 (382)
Q Consensus 70 ~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~ 149 (382)
+.|++++|+++. ++ .++++++|++|++++|.++ .+|+.++.+++|++|++++|.|+ .+| .+..+++|++|++++
T Consensus 1 R~L~Ls~n~l~~--l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~ 74 (124)
T d1dcea3 1 RVLHLAHKDLTV--LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCN 74 (124)
T ss_dssp SEEECTTSCCSS--CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCS
T ss_pred CEEEcCCCCCCC--Cc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCC
Confidence 468999999986 33 3788999999999999998 67878899999999999999998 455 488899999999999
Q ss_pred CCCCCCCCc--ccc-cCCCCEEeCCCCcCCC
Q 048561 150 NFFTGSVPP--QVF-MQTLDVLFLNNNNFMQ 177 (382)
Q Consensus 150 n~l~~~~p~--~~~-l~~L~~L~L~~n~l~~ 177 (382)
|+++ .++. .+. +++|++|++++|.++.
T Consensus 75 N~i~-~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 75 NRLQ-QSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp SCCC-SSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred CccC-CCCCchhhcCCCCCCEEECCCCcCCc
Confidence 9998 4443 233 7889999999998753
No 26
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.43 E-value=1.8e-15 Score=139.98 Aligned_cols=112 Identities=21% Similarity=0.183 Sum_probs=77.5
Q ss_pred hhHHHHHhhccccCCC-----CchhcccCcCCCccccCCccCCCC----CCcCCCCCCCCCEEeCcCCcCcccCch----
Q 048561 211 STLIEVLFLNNLLTGC-----LPYELGFLREARVFDASNNRLTGP----LPCSLGCLEKIERLNLSGNLLYGQVPE---- 277 (382)
Q Consensus 211 ~~L~~L~l~~n~l~~~-----~~~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~---- 277 (382)
..++.|++++|.+... +...+...++|+.|++++|.++.. +...+..+++|++|++++|.|++....
T Consensus 186 ~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~ 265 (344)
T d2ca6a1 186 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 265 (344)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred hhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHH
Confidence 3455556666655421 223466788999999999988632 334566788999999999999754222
Q ss_pred hhc--CCCCCCEEEcccccCcccC-----Ccc-cCCCCCCEEEccCCCCCCCC
Q 048561 278 VLC--ALDNLVNLSLSNNYFTGVG-----PLC-RKLIKNGVLDVNRNCIHYLP 322 (382)
Q Consensus 278 ~~~--~l~~L~~L~L~~N~l~~~~-----~~~-~~l~~L~~L~L~~N~l~~lp 322 (382)
.+. ....|++|++++|+|+... ..+ .+.++|+.|+|++|.+..-.
T Consensus 266 ~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~~ 318 (344)
T d2ca6a1 266 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 318 (344)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCcc
Confidence 332 2467999999999987531 123 35778999999999997644
No 27
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.42 E-value=2.1e-13 Score=106.69 Aligned_cols=101 Identities=25% Similarity=0.337 Sum_probs=85.0
Q ss_pred CEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEecCCCCCCCCCcccccCCCCEEeCCCCc
Q 048561 95 SLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDIRFNFFTGSVPPQVFMQTLDVLFLNNNN 174 (382)
Q Consensus 95 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~l~~L~~L~L~~n~ 174 (382)
|+|++++|+++ .++ .++.+++|++|++++|+++ .+|..+..+++|++|++++|.++ .++....+++|++|++++|.
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDGVANLPRLQELLLCNNR 76 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCGGGTTCSSCCEEECCSSC
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccCccccccccCeEECCCCc
Confidence 68999999998 555 4899999999999999998 78888999999999999999999 67765559999999999999
Q ss_pred CCCcCC-cCCCC-CcchhhhccCcccc
Q 048561 175 FMQKLP-QNLGS-TPALYLTFANNKFT 199 (382)
Q Consensus 175 l~~~~p-~~~~~-~~L~~L~l~~n~l~ 199 (382)
+..... ..+.. .+++++++++|.++
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 975432 33444 67888888888876
No 28
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=2.7e-13 Score=111.20 Aligned_cols=82 Identities=16% Similarity=0.191 Sum_probs=37.0
Q ss_pred ceeEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEe
Q 048561 68 ALASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDI 147 (382)
Q Consensus 68 ~l~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 147 (382)
.++.|+|++|+++. ++..+..+++|+.|++++|.++ .++ .+..+++|++|++++|+++...+..+..+++|++|++
T Consensus 19 ~lr~L~L~~n~I~~--i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L 94 (162)
T d1a9na_ 19 RDRELDLRGYKIPV--IENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 94 (162)
T ss_dssp SCEEEECTTSCCCS--CCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred cCcEEECCCCCCCc--cCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCcccccccccccccee
Confidence 34455555555544 2233344445555555555544 222 2444455555555555554222222334455555555
Q ss_pred cCCCCC
Q 048561 148 RFNFFT 153 (382)
Q Consensus 148 s~n~l~ 153 (382)
++|+++
T Consensus 95 ~~N~i~ 100 (162)
T d1a9na_ 95 TNNSLV 100 (162)
T ss_dssp CSCCCC
T ss_pred cccccc
Confidence 555544
No 29
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38 E-value=3.7e-14 Score=127.55 Aligned_cols=206 Identities=19% Similarity=0.240 Sum_probs=141.9
Q ss_pred ccceeEEEcCCCCCCCCCCccccCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecC-CCCcc-CcccccCCCCCc
Q 048561 66 AIALASIDFNGFELAAPTLDGFIDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNN-KFSGT-FPVAILGKNDLS 143 (382)
Q Consensus 66 ~~~l~~L~L~~~~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n-~l~~~-~p~~l~~l~~L~ 143 (382)
...++.||++++.+.+..+...+..+++|++|+++++.+.+..+..++.+++|++|+++++ .++.. +......+++|+
T Consensus 45 ~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~ 124 (284)
T d2astb2 45 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 124 (284)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcc
Confidence 4579999999998876445666889999999999999998877888999999999999995 56522 222345689999
Q ss_pred EEEecCCC-CCCC-CCcccc--cCCCCEEeCCCCc--CCCcCCcCCCCCcchhhhccCcccccccchhHHHhhhhHHHHH
Q 048561 144 FLDIRFNF-FTGS-VPPQVF--MQTLDVLFLNNNN--FMQKLPQNLGSTPALYLTFANNKFTGSIPRSIGKLSSTLIEVL 217 (382)
Q Consensus 144 ~L~Ls~n~-l~~~-~p~~~~--l~~L~~L~L~~n~--l~~~~p~~~~~~~L~~L~l~~n~l~~~lp~~l~~l~~~L~~L~ 217 (382)
+|+++++. ++.. +...+. .+.|+.|+++++. ++.. .+..-.... ++|++|+
T Consensus 125 ~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~----------------------~l~~l~~~~-~~L~~L~ 181 (284)
T d2astb2 125 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKS----------------------DLSTLVRRC-PNLVHLD 181 (284)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHH----------------------HHHHHHHHC-TTCSEEE
T ss_pred ccccccccccccccchhhhcccccccchhhhcccccccccc----------------------ccccccccc-ccccccc
Confidence 99999964 4321 112222 4789999998753 2210 111111222 5566777
Q ss_pred hhcc-ccCCCCchhcccCcCCCccccCCc-cCCCCCCcCCCCCCCCCEEeCcCCcCcc-cCchhhcCCCCCCEEEccccc
Q 048561 218 FLNN-LLTGCLPYELGFLREARVFDASNN-RLTGPLPCSLGCLEKIERLNLSGNLLYG-QVPEVLCALDNLVNLSLSNNY 294 (382)
Q Consensus 218 l~~n-~l~~~~~~~~~~l~~L~~L~Ls~n-~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~ 294 (382)
+++| .+++.....+..+++|++|++++| .+++.....++.+++|++|+++++ +.. .+......+++| .++.++
T Consensus 182 L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~-~~d~~l~~l~~~lp~L---~i~~~~ 257 (284)
T d2astb2 182 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHL---QINCSH 257 (284)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTS---EESCCC
T ss_pred cccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC-CCHHHHHHHHHhCccc---cccCcc
Confidence 7664 355555667788899999999985 577655566778899999999988 332 222223345554 456677
Q ss_pred Cccc
Q 048561 295 FTGV 298 (382)
Q Consensus 295 l~~~ 298 (382)
++.+
T Consensus 258 ls~~ 261 (284)
T d2astb2 258 FTTI 261 (284)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 7764
No 30
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=1.5e-12 Score=106.66 Aligned_cols=111 Identities=19% Similarity=0.155 Sum_probs=91.3
Q ss_pred cCCCCCCCEEEcCCCcCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEecCCCCCCCCCccc-c-cCCC
Q 048561 88 IDQLPDLSLFHANSNKFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDIRFNFFTGSVPPQV-F-MQTL 165 (382)
Q Consensus 88 ~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~-~-l~~L 165 (382)
+.+...+++|+|++|+|+ .++..+..+++|+.|+|++|.|+ .++ .+..+++|++|++++|+++ .++..+ . +++|
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~-~l~~~~~~~l~~L 89 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDL 89 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCC-EECSCHHHHCTTC
T ss_pred ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhccccccc-CCCcccccccccc
Confidence 567889999999999999 56766788999999999999998 554 5889999999999999999 565544 3 8999
Q ss_pred CEEeCCCCcCCCcCC-cCCCC-CcchhhhccCcccccccc
Q 048561 166 DVLFLNNNNFMQKLP-QNLGS-TPALYLTFANNKFTGSIP 203 (382)
Q Consensus 166 ~~L~L~~n~l~~~~p-~~~~~-~~L~~L~l~~n~l~~~lp 203 (382)
++|++++|.+..... ..+.. .+|+++++++|.++ ..+
T Consensus 90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~-~~~ 128 (162)
T d1a9na_ 90 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKK 128 (162)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GST
T ss_pred ccceeccccccccccccccccccccchhhcCCCccc-ccc
Confidence 999999999875322 23444 78999999999987 444
No 31
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.33 E-value=7.2e-15 Score=135.84 Aligned_cols=232 Identities=15% Similarity=0.105 Sum_probs=158.4
Q ss_pred cceeEEEcCCCCCCCC---CCccccCCCCCCCEEEcCCCcCcc---c-------CCcccCCCCCCCEEEeecCCCCcc--
Q 048561 67 IALASIDFNGFELAAP---TLDGFIDQLPDLSLFHANSNKFSG---T-------ISPKLAQLPYLYELDISNNKFSGT-- 131 (382)
Q Consensus 67 ~~l~~L~L~~~~l~~~---~~~~~~~~l~~L~~L~l~~n~l~~---~-------~p~~l~~l~~L~~L~Ls~n~l~~~-- 131 (382)
..++.|+|++|.+... .+...+...++|+.++++++.... . +...+..+++|++|+|++|.++..
T Consensus 31 ~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 110 (344)
T d2ca6a1 31 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 110 (344)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccccccc
Confidence 3688999999987542 123346778899999998775431 1 223456788999999999998753
Q ss_pred --CcccccCCCCCcEEEecCCCCCCCCCcc--------------cccCCCCEEeCCCCcCCCcCCcCC----C-CCcchh
Q 048561 132 --FPVAILGKNDLSFLDIRFNFFTGSVPPQ--------------VFMQTLDVLFLNNNNFMQKLPQNL----G-STPALY 190 (382)
Q Consensus 132 --~p~~l~~l~~L~~L~Ls~n~l~~~~p~~--------------~~l~~L~~L~L~~n~l~~~~p~~~----~-~~~L~~ 190 (382)
+...+...++|++|++++|.+....... ...+.|+.+.+++|.+.......+ . ...+++
T Consensus 111 ~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~ 190 (344)
T d2ca6a1 111 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 190 (344)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred cchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhcc
Confidence 3334556789999999999875211100 014679999999988754322222 1 257889
Q ss_pred hhccCcccccc-----cchhHHHhhhhHHHHHhhccccCCC----CchhcccCcCCCccccCCccCCCCCC----cCCC-
Q 048561 191 LTFANNKFTGS-----IPRSIGKLSSTLIEVLFLNNLLTGC----LPYELGFLREARVFDASNNRLTGPLP----CSLG- 256 (382)
Q Consensus 191 L~l~~n~l~~~-----lp~~l~~l~~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~Ls~n~l~~~~p----~~~~- 256 (382)
|++++|.+... +...+... +.|+.|++++|.++.. +...+..+++|++|++++|.|++... ..+.
T Consensus 191 L~L~~n~i~~~g~~~~l~~~l~~~-~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~ 269 (344)
T d2ca6a1 191 VKMVQNGIRPEGIEHLLLEGLAYC-QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSK 269 (344)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGC-TTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHT
T ss_pred cccccccccccccccchhhhhcch-hhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhh
Confidence 99999987632 11223333 6788899999987532 34556788999999999999874321 1222
Q ss_pred -CCCCCCEEeCcCCcCccc----Cchhhc-CCCCCCEEEcccccCcccC
Q 048561 257 -CLEKIERLNLSGNLLYGQ----VPEVLC-ALDNLVNLSLSNNYFTGVG 299 (382)
Q Consensus 257 -~l~~L~~L~L~~N~l~~~----~p~~~~-~l~~L~~L~L~~N~l~~~~ 299 (382)
....|++|++++|.|... +...+. ..+.|+.|+|++|.+....
T Consensus 270 ~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~~ 318 (344)
T d2ca6a1 270 LENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 318 (344)
T ss_dssp CSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred ccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCcc
Confidence 246799999999998743 233332 5688999999999997643
No 32
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28 E-value=8.7e-15 Score=139.38 Aligned_cols=134 Identities=16% Similarity=-0.017 Sum_probs=80.7
Q ss_pred CcchhhhccCcccccccchh----HHHhhhhHHHHHhhccccCCCCchhc-----ccCcCCCccccCCccCCCCCCc---
Q 048561 186 TPALYLTFANNKFTGSIPRS----IGKLSSTLIEVLFLNNLLTGCLPYEL-----GFLREARVFDASNNRLTGPLPC--- 253 (382)
Q Consensus 186 ~~L~~L~l~~n~l~~~lp~~----l~~l~~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~Ls~n~l~~~~p~--- 253 (382)
..++.+++++|.+....... +... ..+..+++++|.+.......+ .....|+.+++++|.++.....
T Consensus 255 ~~l~~l~l~~n~i~~~~~~~~~~~l~~~-~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~ 333 (460)
T d1z7xw1 255 SRLRTLWIWECGITAKGCGDLCRVLRAK-ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 333 (460)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHC-TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred cccccccccccccccccccccccccccc-ccccccccccccccccccchhhccccccccccccccccccchhhhhhhhcc
Confidence 35777888888776332211 1221 344555666666542211111 2345788888888877643222
Q ss_pred -CCCCCCCCCEEeCcCCcCccc----Cchhhc-CCCCCCEEEcccccCccc-----CCcccCCCCCCEEEccCCCCCC
Q 048561 254 -SLGCLEKIERLNLSGNLLYGQ----VPEVLC-ALDNLVNLSLSNNYFTGV-----GPLCRKLIKNGVLDVNRNCIHY 320 (382)
Q Consensus 254 -~~~~l~~L~~L~L~~N~l~~~----~p~~~~-~l~~L~~L~L~~N~l~~~-----~~~~~~l~~L~~L~L~~N~l~~ 320 (382)
.+....+|++|+|++|.|.+. +...+. ..+.|++|+|++|+|+.. ...+..+++|++|+|++|.|+.
T Consensus 334 ~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~ 411 (460)
T d1z7xw1 334 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 411 (460)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred cccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCH
Confidence 223456788888888888643 233333 356788888888888752 1235567888888888888764
No 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=2.2e-11 Score=98.94 Aligned_cols=91 Identities=20% Similarity=0.140 Sum_probs=76.2
Q ss_pred ccccCCCCCCCEEEcCCC-cCcccCCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEecCCCCCCCCCcccc-c
Q 048561 85 DGFIDQLPDLSLFHANSN-KFSGTISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDIRFNFFTGSVPPQVF-M 162 (382)
Q Consensus 85 ~~~~~~l~~L~~L~l~~n-~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~-l 162 (382)
+..+..+++|++|++++| .++...+.+|.++++|+.|+|++|+|+...+..|..+++|++|+|++|+++ .+|...+ .
T Consensus 24 p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~~ 102 (156)
T d2ifga3 24 LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQG 102 (156)
T ss_dssp TTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCCSTTTCS
T ss_pred cccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc-ccChhhhcc
Confidence 344778899999999866 588666678999999999999999999666778999999999999999999 7776655 5
Q ss_pred CCCCEEeCCCCcCC
Q 048561 163 QTLDVLFLNNNNFM 176 (382)
Q Consensus 163 ~~L~~L~L~~n~l~ 176 (382)
..|++|+|++|.+.
T Consensus 103 ~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 103 LSLQELVLSGNPLH 116 (156)
T ss_dssp CCCCEEECCSSCCC
T ss_pred ccccccccCCCccc
Confidence 67999999999764
No 34
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=1.2e-11 Score=100.40 Aligned_cols=92 Identities=17% Similarity=0.055 Sum_probs=60.4
Q ss_pred chhcccCcCCCccccCCc-cCCCCCCcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcccccCcccCCcccCCC
Q 048561 228 PYELGFLREARVFDASNN-RLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLSNNYFTGVGPLCRKLI 306 (382)
Q Consensus 228 ~~~~~~l~~L~~L~Ls~n-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~ 306 (382)
|..+..+++|++|++++| .++...+.+|.++++|+.|++++|+|+...+.+|..+++|++|+|++|+|+.+++......
T Consensus 24 p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~~ 103 (156)
T d2ifga3 24 LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGL 103 (156)
T ss_dssp TTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSC
T ss_pred cccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhccc
Confidence 445556667777777654 3664445566677777777777777776556667777777777777777776665444444
Q ss_pred CCCEEEccCCCCC
Q 048561 307 KNGVLDVNRNCIH 319 (382)
Q Consensus 307 ~L~~L~L~~N~l~ 319 (382)
.|+.|+|++|.+.
T Consensus 104 ~l~~L~L~~Np~~ 116 (156)
T d2ifga3 104 SLQELVLSGNPLH 116 (156)
T ss_dssp CCCEEECCSSCCC
T ss_pred cccccccCCCccc
Confidence 6777777777664
No 35
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.20 E-value=8.2e-14 Score=118.34 Aligned_cols=66 Identities=20% Similarity=0.330 Sum_probs=39.9
Q ss_pred CCcccCCCCCCCEEEeecCCCCccCcccccCCCCCcEEEecCCCCCCCCCcccc-cCCCCEEeCCCCcCC
Q 048561 108 ISPKLAQLPYLYELDISNNKFSGTFPVAILGKNDLSFLDIRFNFFTGSVPPQVF-MQTLDVLFLNNNNFM 176 (382)
Q Consensus 108 ~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~-l~~L~~L~L~~n~l~ 176 (382)
++.++..+++|++|+|++|+|+ .++ .+..+++|++|+|++|.++ .++.... +++|+.|++++|.++
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~ 106 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA 106 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECC
T ss_pred hhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-ccccccccccccccccccccccc
Confidence 3445666666777777777666 343 3666667777777777666 5554333 455666666666543
No 36
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.20 E-value=9.2e-14 Score=118.01 Aligned_cols=58 Identities=12% Similarity=0.118 Sum_probs=43.0
Q ss_pred CCCEEEeecC--CCCccCcccccCCCCCcEEEecCCCCCCCCCcccccCCCCEEeCCCCcCC
Q 048561 117 YLYELDISNN--KFSGTFPVAILGKNDLSFLDIRFNFFTGSVPPQVFMQTLDVLFLNNNNFM 176 (382)
Q Consensus 117 ~L~~L~Ls~n--~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~l~~L~~L~L~~n~l~ 176 (382)
.++.+++.+. .+. .++..+..+++|++|+|++|.|+ .++....+++|++|++++|.++
T Consensus 24 ~~~~~~l~~~~~~i~-~l~~sl~~L~~L~~L~Ls~n~I~-~i~~l~~l~~L~~L~Ls~N~i~ 83 (198)
T d1m9la_ 24 EAEKVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIE-KISSLSGMENLRILSLGRNLIK 83 (198)
T ss_dssp TCSCEECCBCCTTCC-CCHHHHHHTTTCCEEECSEEEES-CCCCHHHHTTCCEEECCEEEEC
T ss_pred ccceeeeecccCchh-hhhhHHhcccccceeECcccCCC-CcccccCCccccChhhcccccc
Confidence 3455666553 343 56677888999999999999998 6665444889999999988765
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.10 E-value=3.5e-07 Score=73.88 Aligned_cols=82 Identities=24% Similarity=0.099 Sum_probs=59.1
Q ss_pred cccCcCCCccccCCccCCCCC--CcCCCCCCCCCEEeCcCCcCcccCchhhcCCCCCCEEEcccccCcccCC--------
Q 048561 231 LGFLREARVFDASNNRLTGPL--PCSLGCLEKIERLNLSGNLLYGQVPEVLCALDNLVNLSLSNNYFTGVGP-------- 300 (382)
Q Consensus 231 ~~~l~~L~~L~Ls~n~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-------- 300 (382)
+..+++|++|+|++|+|+... +..+..+++|+.|++++|.|+...+........|+.|++++|.++....
T Consensus 61 ~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~ 140 (162)
T d1koha1 61 EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA 140 (162)
T ss_dssp HHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHH
T ss_pred HHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHH
Confidence 346788999999999988432 2345567889999999999884433344445678999999998876432
Q ss_pred cccCCCCCCEEE
Q 048561 301 LCRKLIKNGVLD 312 (382)
Q Consensus 301 ~~~~l~~L~~L~ 312 (382)
.+..+|+|+.||
T Consensus 141 i~~~~P~L~~LD 152 (162)
T d1koha1 141 IRERFPKLLRLD 152 (162)
T ss_dssp HHTTSTTCCEET
T ss_pred HHHHCCCCCEEC
Confidence 246788888875
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.08 E-value=1.8e-07 Score=75.64 Aligned_cols=79 Identities=20% Similarity=0.136 Sum_probs=60.1
Q ss_pred hhHHHHHhhccccCCCC--chhcccCcCCCccccCCccCCCCCCcCCCCCCCCCEEeCcCCcCcccCc-------hhhcC
Q 048561 211 STLIEVLFLNNLLTGCL--PYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVP-------EVLCA 281 (382)
Q Consensus 211 ~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-------~~~~~ 281 (382)
+.|++|++++|+++... +..+..+++|+.|++++|.|+....-.+.....|+.|++++|.+..... ..+..
T Consensus 65 ~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~ 144 (162)
T d1koha1 65 PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRER 144 (162)
T ss_dssp TTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTT
T ss_pred CCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHH
Confidence 78999999999988643 3557789999999999999995333233344579999999999985443 23567
Q ss_pred CCCCCEEE
Q 048561 282 LDNLVNLS 289 (382)
Q Consensus 282 l~~L~~L~ 289 (382)
+++|+.||
T Consensus 145 ~P~L~~LD 152 (162)
T d1koha1 145 FPKLLRLD 152 (162)
T ss_dssp STTCCEET
T ss_pred CCCCCEEC
Confidence 89999886
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.29 E-value=2.5e-05 Score=62.86 Aligned_cols=91 Identities=13% Similarity=0.076 Sum_probs=53.7
Q ss_pred cCcCCCccccCCc-cCCCC----CCcCCCCCCCCCEEeCcCCcCccc----CchhhcCCCCCCEEEcccccCcccC----
Q 048561 233 FLREARVFDASNN-RLTGP----LPCSLGCLEKIERLNLSGNLLYGQ----VPEVLCALDNLVNLSLSNNYFTGVG---- 299 (382)
Q Consensus 233 ~l~~L~~L~Ls~n-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~---- 299 (382)
+.++|+.|+|+++ .++.. +...+...++|++|++++|.+... +...+...+.|++|+|++|.|+...
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l 92 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 92 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence 3456777777653 34421 222344556777777777776532 2233445567777777777776521
Q ss_pred -CcccCCCCCCEEEccCCCCCCCCC
Q 048561 300 -PLCRKLIKNGVLDVNRNCIHYLPD 323 (382)
Q Consensus 300 -~~~~~l~~L~~L~L~~N~l~~lp~ 323 (382)
..+...+.|++|++++|.+..+.+
T Consensus 93 ~~aL~~n~sL~~L~l~~n~~~~~g~ 117 (167)
T d1pgva_ 93 LRSTLVTQSIVEFKADNQRQSVLGN 117 (167)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCH
T ss_pred HHHHHhCCcCCEEECCCCcCCCccH
Confidence 135566677777777777666543
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.24 E-value=0.0001 Score=59.11 Aligned_cols=86 Identities=12% Similarity=0.129 Sum_probs=50.6
Q ss_pred ceeEEEcCCCC-CCCCC---CccccCCCCCCCEEEcCCCcCccc----CCcccCCCCCCCEEEeecCCCCcc----Cccc
Q 048561 68 ALASIDFNGFE-LAAPT---LDGFIDQLPDLSLFHANSNKFSGT----ISPKLAQLPYLYELDISNNKFSGT----FPVA 135 (382)
Q Consensus 68 ~l~~L~L~~~~-l~~~~---~~~~~~~l~~L~~L~l~~n~l~~~----~p~~l~~l~~L~~L~Ls~n~l~~~----~p~~ 135 (382)
++++|+|++++ +.... +...+...+.|++|++++|.+... +...+...+.|++|+|++|.++.. +-..
T Consensus 16 ~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~a 95 (167)
T d1pgva_ 16 DLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRS 95 (167)
T ss_dssp SCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHH
T ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHH
Confidence 57777777643 43311 122345566777777777776532 223344456777777777777632 2234
Q ss_pred ccCCCCCcEEEecCCCCC
Q 048561 136 ILGKNDLSFLDIRFNFFT 153 (382)
Q Consensus 136 l~~l~~L~~L~Ls~n~l~ 153 (382)
+...+.|++|++++|.+.
T Consensus 96 L~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 96 TLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp TTTTCCCSEEECCCCSSC
T ss_pred HHhCCcCCEEECCCCcCC
Confidence 555667777777777654
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.27 E-value=0.00029 Score=56.11 Aligned_cols=80 Identities=19% Similarity=0.258 Sum_probs=36.0
Q ss_pred ceeEEEcCCC-CCCCCC---CccccCCCCCCCEEEcCCCcCccc----CCcccCCCCCCCEEEeecCCCCcc----Cccc
Q 048561 68 ALASIDFNGF-ELAAPT---LDGFIDQLPDLSLFHANSNKFSGT----ISPKLAQLPYLYELDISNNKFSGT----FPVA 135 (382)
Q Consensus 68 ~l~~L~L~~~-~l~~~~---~~~~~~~l~~L~~L~l~~n~l~~~----~p~~l~~l~~L~~L~Ls~n~l~~~----~p~~ 135 (382)
.++.|+++++ .++... +..++...++|+.|++++|.+... +...+...+.++.+++++|.++.. +...
T Consensus 18 ~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~ 97 (166)
T d1io0a_ 18 DLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEA 97 (166)
T ss_dssp TCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHG
T ss_pred CCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHH
Confidence 4555666552 333211 122234455566666666555422 122233445556666655555421 2233
Q ss_pred ccCCCCCcEEEe
Q 048561 136 ILGKNDLSFLDI 147 (382)
Q Consensus 136 l~~l~~L~~L~L 147 (382)
+...++|+.++|
T Consensus 98 l~~~~~L~~l~L 109 (166)
T d1io0a_ 98 LQSNTSLIELRI 109 (166)
T ss_dssp GGGCSSCCEEEC
T ss_pred HHhCccccEEee
Confidence 444455554444
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.03 E-value=0.00024 Score=56.69 Aligned_cols=111 Identities=16% Similarity=0.202 Sum_probs=71.2
Q ss_pred ccCCCCCCCEEEcCC-CcCcc----cCCcccCCCCCCCEEEeecCCCCcc----CcccccCCCCCcEEEecCCCCCCCCC
Q 048561 87 FIDQLPDLSLFHANS-NKFSG----TISPKLAQLPYLYELDISNNKFSGT----FPVAILGKNDLSFLDIRFNFFTGSVP 157 (382)
Q Consensus 87 ~~~~l~~L~~L~l~~-n~l~~----~~p~~l~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~Ls~n~l~~~~p 157 (382)
...+.+.|++|++++ +.++. .+-.++...++|++|+|++|.++.. +...+...+.++.+++++|.+....-
T Consensus 12 ~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~ 91 (166)
T d1io0a_ 12 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 91 (166)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhH
Confidence 345678999999997 45652 2344567789999999999998743 23345567889999999998863322
Q ss_pred cc----cc-cCCCCEEeC--CCCcCCCcCCcCC----C-CCcchhhhccCcc
Q 048561 158 PQ----VF-MQTLDVLFL--NNNNFMQKLPQNL----G-STPALYLTFANNK 197 (382)
Q Consensus 158 ~~----~~-l~~L~~L~L--~~n~l~~~~p~~~----~-~~~L~~L~l~~n~ 197 (382)
.. +. .++|+.++| ++|.+....-..+ . ..++++|+++.+.
T Consensus 92 ~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 92 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 11 11 467887655 4555543221122 1 2567777776654
Done!