Query 048562
Match_columns 464
No_of_seqs 129 out of 1253
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 18:34:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048562.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048562hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 5.8E-60 2E-64 480.3 36.2 410 6-459 12-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1.5E-56 5.2E-61 461.7 42.6 434 5-460 4-469 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.6E-56 5.4E-61 462.7 35.5 430 5-462 6-481 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 4.7E-56 1.6E-60 455.2 35.0 421 1-462 1-454 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 4.3E-55 1.5E-59 449.1 32.5 420 6-459 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 1E-42 3.4E-47 354.1 30.8 381 5-460 10-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.2E-42 4.2E-47 350.2 25.7 357 6-458 21-398 (400)
8 3rsc_A CALG2; TDP, enediyne, s 100.0 4.5E-39 1.6E-43 325.9 28.6 366 5-458 18-411 (415)
9 1iir_A Glycosyltransferase GTF 100.0 9.4E-39 3.2E-43 324.0 28.7 366 8-461 1-401 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 1E-38 3.5E-43 323.8 25.7 364 8-461 1-402 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 5.3E-38 1.8E-42 316.2 29.7 368 5-459 2-397 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 7E-38 2.4E-42 316.4 28.1 360 8-460 1-382 (404)
13 2iyf_A OLED, oleandomycin glyc 100.0 1.4E-36 4.8E-41 309.2 29.3 364 1-439 1-383 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 2.9E-36 1E-40 308.1 29.4 367 5-460 18-435 (441)
15 2p6p_A Glycosyl transferase; X 100.0 3.9E-35 1.3E-39 294.1 29.2 349 8-459 1-378 (384)
16 4fzr_A SSFS6; structural genom 100.0 4.9E-35 1.7E-39 294.8 19.8 340 5-438 13-383 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1.4E-33 4.8E-38 284.2 27.8 349 5-459 18-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.1E-32 3.7E-37 276.8 26.2 353 7-460 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 2.6E-30 9E-35 261.1 30.8 364 5-459 18-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 4.2E-30 1.4E-34 255.8 27.2 323 7-433 2-338 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1E-26 3.5E-31 205.9 14.6 162 238-438 7-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 1E-19 3.4E-24 180.2 24.3 316 8-430 7-334 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 9.9E-15 3.4E-19 138.5 19.0 266 8-391 1-275 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.5 3E-14 1E-18 129.9 10.3 135 250-417 26-197 (224)
25 3c48_A Predicted glycosyltrans 99.5 1.8E-11 6.3E-16 123.7 28.7 377 5-460 18-427 (438)
26 3okp_A GDP-mannose-dependent a 99.5 2.6E-11 8.9E-16 120.4 27.0 332 5-435 2-360 (394)
27 2gek_A Phosphatidylinositol ma 99.4 1.9E-11 6.4E-16 122.1 22.9 330 5-435 18-365 (406)
28 1v4v_A UDP-N-acetylglucosamine 99.4 3.6E-11 1.2E-15 119.1 23.2 316 6-420 4-335 (376)
29 3dzc_A UDP-N-acetylglucosamine 99.3 5.3E-11 1.8E-15 119.1 18.5 328 5-420 23-368 (396)
30 2r60_A Glycosyl transferase, g 99.3 6.2E-10 2.1E-14 114.6 27.0 367 1-436 1-441 (499)
31 1vgv_A UDP-N-acetylglucosamine 99.3 1.5E-10 5.2E-15 114.8 20.5 327 8-421 1-344 (384)
32 3fro_A GLGA glycogen synthase; 99.3 1.1E-09 3.9E-14 110.1 27.0 96 320-436 310-413 (439)
33 3ot5_A UDP-N-acetylglucosamine 99.3 2.4E-11 8.2E-16 121.9 13.7 321 5-420 25-362 (403)
34 2jjm_A Glycosyl transferase, g 99.3 1.8E-09 6.3E-14 107.4 25.8 332 7-434 15-365 (394)
35 2iw1_A Lipopolysaccharide core 99.1 2.8E-08 9.5E-13 97.7 26.2 147 253-436 196-354 (374)
36 3beo_A UDP-N-acetylglucosamine 99.1 7.2E-09 2.4E-13 102.2 22.0 321 5-420 6-343 (375)
37 2iuy_A Avigt4, glycosyltransfe 99.1 3.7E-09 1.3E-13 103.0 19.5 127 255-418 164-307 (342)
38 2x6q_A Trehalose-synthase TRET 99.1 1.6E-08 5.4E-13 101.4 22.0 93 320-434 292-394 (416)
39 4hwg_A UDP-N-acetylglucosamine 99.0 2E-09 6.7E-14 107.1 13.9 320 6-421 8-344 (385)
40 2qzs_A Glycogen synthase; glyc 98.8 1.4E-06 4.8E-11 89.0 24.4 141 254-430 293-455 (485)
41 1rzu_A Glycogen synthase 1; gl 98.7 7.8E-07 2.7E-11 90.9 21.4 141 254-430 292-454 (485)
42 3s28_A Sucrose synthase 1; gly 98.6 5.7E-06 2E-10 89.3 22.4 95 320-434 639-749 (816)
43 2vsy_A XCC0866; transferase, g 98.6 6.1E-05 2.1E-09 78.4 29.9 96 321-433 434-536 (568)
44 3oy2_A Glycosyltransferase B73 98.5 1.4E-05 5E-10 79.5 23.4 90 323-432 256-368 (413)
45 2xci_A KDO-transferase, 3-deox 98.4 0.00015 5E-09 71.5 26.2 98 322-438 261-364 (374)
46 2f9f_A First mannosyl transfer 98.3 7E-06 2.4E-10 71.8 12.8 132 254-421 24-164 (177)
47 3qhp_A Type 1 capsular polysac 98.0 4.3E-05 1.5E-09 65.6 11.8 146 253-437 2-158 (166)
48 2hy7_A Glucuronosyltransferase 98.0 0.00089 3E-08 66.6 22.7 77 320-420 264-353 (406)
49 2x0d_A WSAF; GT4 family, trans 97.8 0.00011 3.6E-09 73.6 11.1 80 320-420 294-380 (413)
50 4gyw_A UDP-N-acetylglucosamine 97.7 0.00028 9.6E-09 75.6 13.9 151 251-430 521-679 (723)
51 3q3e_A HMW1C-like glycosyltran 97.7 0.00036 1.2E-08 72.2 13.1 153 253-433 441-602 (631)
52 2bfw_A GLGA glycogen synthase; 97.6 0.0019 6.3E-08 56.9 15.0 93 322-435 96-197 (200)
53 3tov_A Glycosyl transferase fa 97.4 0.0096 3.3E-07 57.8 18.5 106 5-131 6-115 (349)
54 1psw_A ADP-heptose LPS heptosy 97.3 0.037 1.3E-06 53.2 21.5 103 8-131 1-106 (348)
55 3rhz_A GTF3, nucleotide sugar 97.0 0.003 1E-07 61.1 10.2 112 320-458 214-337 (339)
56 2gt1_A Lipopolysaccharide hept 96.7 0.061 2.1E-06 51.3 17.0 109 8-132 1-114 (326)
57 2wqk_A 5'-nucleotidase SURE; S 93.8 0.3 1E-05 44.7 9.7 114 7-135 1-128 (251)
58 2phj_A 5'-nucleotidase SURE; S 92.1 0.87 3E-05 41.4 10.0 115 7-135 1-128 (251)
59 3vue_A GBSS-I, granule-bound s 91.5 1.6 5.6E-05 44.6 12.6 139 254-418 328-476 (536)
60 3ty2_A 5'-nucleotidase SURE; s 90.2 0.3 1E-05 44.7 4.9 115 5-135 9-136 (261)
61 3auf_A Glycinamide ribonucleot 89.1 3.7 0.00013 36.8 11.3 110 5-135 20-132 (229)
62 2ywr_A Phosphoribosylglycinami 89.0 2.7 9.1E-05 37.4 10.2 104 7-135 1-111 (216)
63 1g5t_A COB(I)alamin adenosyltr 88.9 3 0.0001 36.4 10.2 98 7-116 28-131 (196)
64 3av3_A Phosphoribosylglycinami 85.5 5.6 0.00019 35.1 10.2 108 7-135 3-113 (212)
65 4dim_A Phosphoribosylglycinami 83.2 6.1 0.00021 38.3 10.4 89 5-128 5-97 (403)
66 3q0i_A Methionyl-tRNA formyltr 82.9 8.3 0.00029 36.3 10.7 104 5-135 5-116 (318)
67 3nb0_A Glycogen [starch] synth 82.6 4.3 0.00015 42.5 9.1 43 323-367 495-550 (725)
68 2yxb_A Coenzyme B12-dependent 82.5 20 0.00069 29.9 12.1 110 6-131 17-126 (161)
69 1j9j_A Stationary phase surviV 81.8 3.9 0.00013 37.0 7.6 115 8-134 1-128 (247)
70 3ih5_A Electron transfer flavo 81.2 2.2 7.5E-05 37.9 5.7 110 7-132 3-121 (217)
71 2bw0_A 10-FTHFDH, 10-formyltet 80.8 8.8 0.0003 36.4 10.1 106 5-135 20-130 (329)
72 2v4n_A Multifunctional protein 80.3 6.4 0.00022 35.8 8.5 111 8-134 2-126 (254)
73 3vue_A GBSS-I, granule-bound s 80.0 0.88 3E-05 46.6 3.0 39 6-44 8-52 (536)
74 2e6c_A 5'-nucleotidase SURE; S 79.1 10 0.00036 34.1 9.5 116 8-135 1-130 (244)
75 3fgn_A Dethiobiotin synthetase 78.9 19 0.00065 32.6 11.4 117 7-136 26-167 (251)
76 1l5x_A SurviVal protein E; str 78.9 6.9 0.00023 36.1 8.3 114 8-135 1-128 (280)
77 3zqu_A Probable aromatic acid 78.0 2.4 8.3E-05 37.4 4.8 47 6-53 3-49 (209)
78 1kjn_A MTH0777; hypotethical p 77.7 2.5 8.6E-05 34.7 4.4 105 1-133 1-110 (157)
79 1ccw_A Protein (glutamate muta 77.6 2.8 9.6E-05 34.2 4.8 47 6-52 2-48 (137)
80 3iqw_A Tail-anchored protein t 77.5 6.5 0.00022 37.4 8.1 41 7-47 15-56 (334)
81 1jkx_A GART;, phosphoribosylgl 77.5 21 0.00071 31.4 10.8 107 8-135 1-110 (212)
82 1fmt_A Methionyl-tRNA FMet for 76.1 10 0.00035 35.6 8.9 100 6-135 2-112 (314)
83 3eag_A UDP-N-acetylmuramate:L- 75.5 14 0.00047 34.8 9.8 35 6-44 3-37 (326)
84 2ejb_A Probable aromatic acid 75.2 3.7 0.00013 35.6 5.1 45 7-52 1-45 (189)
85 3da8_A Probable 5'-phosphoribo 75.2 5.7 0.00019 35.2 6.5 110 4-135 9-120 (215)
86 3rfo_A Methionyl-tRNA formyltr 74.0 17 0.00057 34.2 9.8 104 5-135 2-113 (317)
87 2iz6_A Molybdenum cofactor car 74.0 32 0.0011 29.2 10.7 45 324-368 92-140 (176)
88 3igf_A ALL4481 protein; two-do 73.7 2 6.9E-05 41.7 3.4 37 7-43 1-38 (374)
89 3vot_A L-amino acid ligase, BL 73.2 11 0.00038 36.8 8.8 97 5-129 3-101 (425)
90 3tqr_A Phosphoribosylglycinami 73.1 16 0.00054 32.3 8.8 106 5-135 3-114 (215)
91 2rjn_A Response regulator rece 72.7 35 0.0012 27.2 10.7 38 1-42 1-38 (154)
92 3lqk_A Dipicolinate synthase s 72.6 4 0.00014 35.8 4.7 45 5-50 5-50 (201)
93 1mvl_A PPC decarboxylase athal 72.0 4.2 0.00014 35.9 4.8 47 5-53 17-63 (209)
94 4ds3_A Phosphoribosylglycinami 71.6 15 0.0005 32.3 8.2 106 5-135 5-117 (209)
95 1y80_A Predicted cobalamin bin 70.4 35 0.0012 29.6 10.6 48 6-53 87-134 (210)
96 2pn1_A Carbamoylphosphate synt 70.3 7.7 0.00026 36.4 6.7 34 5-44 2-37 (331)
97 3ug7_A Arsenical pump-driving 68.1 6.8 0.00023 37.4 5.8 41 6-46 24-65 (349)
98 3kcq_A Phosphoribosylglycinami 67.8 24 0.00082 31.1 8.8 101 5-135 6-113 (215)
99 1meo_A Phosophoribosylglycinam 67.6 34 0.0012 29.9 9.7 107 8-135 1-110 (209)
100 1p3y_1 MRSD protein; flavoprot 66.3 2.9 0.0001 36.4 2.5 47 5-52 6-52 (194)
101 2dzd_A Pyruvate carboxylase; b 65.8 16 0.00055 36.1 8.2 103 1-130 1-108 (461)
102 3qjg_A Epidermin biosynthesis 65.7 6.7 0.00023 33.5 4.6 44 8-52 6-49 (175)
103 2ixd_A LMBE-related protein; h 65.0 8.7 0.0003 34.6 5.5 21 92-112 84-104 (242)
104 3ezx_A MMCP 1, monomethylamine 64.6 48 0.0017 29.0 10.3 47 6-52 91-137 (215)
105 1sbz_A Probable aromatic acid 64.0 6.4 0.00022 34.3 4.2 45 8-53 1-46 (197)
106 3tqq_A Methionyl-tRNA formyltr 63.8 31 0.0011 32.3 9.3 102 7-135 2-111 (314)
107 4dzz_A Plasmid partitioning pr 63.1 37 0.0013 28.8 9.2 38 9-46 3-41 (206)
108 1g63_A Epidermin modifying enz 62.6 6.9 0.00024 33.6 4.1 46 7-53 2-47 (181)
109 3mcu_A Dipicolinate synthase, 62.1 7 0.00024 34.4 4.1 42 5-47 3-45 (207)
110 1qzu_A Hypothetical protein MD 62.1 6.2 0.00021 34.7 3.8 47 5-52 17-64 (206)
111 1uqt_A Alpha, alpha-trehalose- 61.4 38 0.0013 33.8 10.0 109 323-461 333-454 (482)
112 3p9x_A Phosphoribosylglycinami 61.3 83 0.0029 27.4 11.0 108 7-135 2-112 (211)
113 3t5t_A Putative glycosyltransf 59.3 37 0.0013 34.0 9.4 110 322-460 353-472 (496)
114 3dfz_A SIRC, precorrin-2 dehyd 59.3 65 0.0022 28.4 10.0 151 245-439 26-185 (223)
115 1id1_A Putative potassium chan 58.7 8.3 0.00029 31.6 3.9 35 5-44 1-35 (153)
116 3lyu_A Putative hydrogenase; t 57.1 71 0.0024 25.6 9.4 113 7-131 18-136 (142)
117 3pdi_B Nitrogenase MOFE cofact 56.5 35 0.0012 33.8 8.7 34 96-132 366-399 (458)
118 3kkl_A Probable chaperone prot 56.4 15 0.00052 33.0 5.5 41 5-45 1-52 (244)
119 3u7q_B Nitrogenase molybdenum- 56.4 56 0.0019 33.0 10.2 95 7-132 364-469 (523)
120 2i2x_B MTAC, methyltransferase 55.8 14 0.00049 33.5 5.3 45 6-50 122-166 (258)
121 3n7t_A Macrophage binding prot 55.8 22 0.00076 32.0 6.5 38 7-44 9-57 (247)
122 3ghy_A Ketopantoate reductase 55.1 11 0.00036 35.7 4.5 41 6-51 2-42 (335)
123 2bln_A Protein YFBG; transfera 54.9 73 0.0025 29.6 10.1 40 96-135 66-106 (305)
124 3i6i_A Putative leucoanthocyan 54.7 1.3E+02 0.0046 27.7 12.4 101 5-132 8-117 (346)
125 1uan_A Hypothetical protein TT 54.5 26 0.0009 31.0 6.7 22 92-113 82-103 (227)
126 3ouz_A Biotin carboxylase; str 54.5 43 0.0015 32.8 9.0 100 5-130 4-107 (446)
127 4egb_A DTDP-glucose 4,6-dehydr 53.6 1.2E+02 0.0042 27.8 11.9 34 5-42 22-55 (346)
128 3mc3_A DSRE/DSRF-like family p 53.3 23 0.0008 28.4 5.7 46 7-52 15-63 (134)
129 2xj4_A MIPZ; replication, cell 52.8 14 0.00049 33.8 4.9 41 5-45 1-43 (286)
130 3gpi_A NAD-dependent epimerase 52.6 16 0.00053 33.3 5.1 35 5-44 1-35 (286)
131 3io3_A DEHA2D07832P; chaperone 52.2 53 0.0018 31.2 8.9 39 8-46 18-59 (348)
132 3g0o_A 3-hydroxyisobutyrate de 51.9 7.6 0.00026 36.1 2.8 39 1-44 1-39 (303)
133 2lpm_A Two-component response 51.8 9.9 0.00034 30.2 3.1 36 98-133 46-86 (123)
134 3gl9_A Response regulator; bet 51.4 25 0.00084 26.9 5.4 39 98-136 39-86 (122)
135 2qs7_A Uncharacterized protein 51.1 14 0.00047 30.3 3.9 46 7-52 7-53 (144)
136 3to5_A CHEY homolog; alpha(5)b 50.7 18 0.00062 29.1 4.6 38 99-136 51-97 (134)
137 2r8r_A Sensor protein; KDPD, P 50.5 22 0.00074 31.7 5.4 39 7-45 6-44 (228)
138 4e5s_A MCCFLIKE protein (BA_56 50.3 23 0.00079 33.5 5.9 73 265-367 62-136 (331)
139 2zts_A Putative uncharacterize 49.8 1E+02 0.0036 26.7 10.2 123 9-135 32-181 (251)
140 1jx7_A Hypothetical protein YC 49.8 21 0.00071 27.5 4.7 44 7-50 1-49 (117)
141 1kjq_A GART 2, phosphoribosylg 49.7 1.2E+02 0.0041 28.7 11.2 88 6-128 10-99 (391)
142 1rw7_A YDR533CP; alpha-beta sa 49.6 30 0.001 30.9 6.3 40 6-45 2-52 (243)
143 1qgu_B Protein (nitrogenase mo 49.5 64 0.0022 32.5 9.4 96 7-132 360-465 (519)
144 2b8t_A Thymidine kinase; deoxy 49.1 1E+02 0.0034 27.1 9.6 39 7-45 11-50 (223)
145 4b4o_A Epimerase family protei 48.9 15 0.00052 33.6 4.4 33 8-44 1-33 (298)
146 4b4k_A N5-carboxyaminoimidazol 48.4 1.2E+02 0.0043 25.6 9.8 148 252-443 22-176 (181)
147 3llv_A Exopolyphosphatase-rela 48.2 12 0.0004 30.0 3.1 34 6-44 5-38 (141)
148 2q5c_A NTRC family transcripti 47.5 98 0.0033 26.5 9.1 39 95-136 132-170 (196)
149 3o1l_A Formyltetrahydrofolate 47.4 65 0.0022 29.9 8.3 105 5-135 103-212 (302)
150 2g1u_A Hypothetical protein TM 47.3 20 0.00068 29.3 4.4 35 5-44 17-51 (155)
151 3h7a_A Short chain dehydrogena 46.6 73 0.0025 28.2 8.5 40 1-44 1-40 (252)
152 2hy5_B Intracellular sulfur ox 46.6 18 0.00061 29.3 3.9 43 7-49 5-50 (136)
153 2dwc_A PH0318, 433AA long hypo 45.9 1.9E+02 0.0064 27.9 12.1 87 7-128 19-107 (433)
154 2yvq_A Carbamoyl-phosphate syn 45.4 29 0.00099 28.2 5.1 97 11-132 27-131 (143)
155 3bgw_A DNAB-like replicative h 45.4 1.6E+02 0.0054 28.8 11.4 42 9-50 199-240 (444)
156 2a5l_A Trp repressor binding p 45.3 24 0.00081 30.1 4.8 40 5-44 3-43 (200)
157 3hn2_A 2-dehydropantoate 2-red 45.0 33 0.0011 31.8 6.1 40 8-53 3-42 (312)
158 3obi_A Formyltetrahydrofolate 44.7 1.1E+02 0.0038 28.1 9.4 105 5-135 87-197 (288)
159 2ew2_A 2-dehydropantoate 2-red 43.6 15 0.00051 33.9 3.4 34 6-44 2-35 (316)
160 3nrb_A Formyltetrahydrofolate 43.3 1.9E+02 0.0064 26.5 10.8 108 5-135 86-196 (287)
161 3mjf_A Phosphoribosylamine--gl 43.2 31 0.0011 33.8 5.8 91 6-131 2-96 (431)
162 3rg8_A Phosphoribosylaminoimid 43.1 1.3E+02 0.0044 24.9 8.6 137 253-439 3-148 (159)
163 1bg6_A N-(1-D-carboxylethyl)-L 43.1 16 0.00054 34.6 3.6 35 5-44 2-36 (359)
164 4h1h_A LMO1638 protein; MCCF-l 43.1 34 0.0011 32.2 5.8 72 266-367 63-136 (327)
165 3bul_A Methionine synthase; tr 42.8 96 0.0033 31.6 9.4 48 6-53 97-144 (579)
166 3l6d_A Putative oxidoreductase 42.8 15 0.0005 34.3 3.2 37 3-44 5-41 (306)
167 1mio_B Nitrogenase molybdenum 42.3 94 0.0032 30.6 9.2 35 95-132 375-409 (458)
168 3sr3_A Microcin immunity prote 42.1 34 0.0011 32.4 5.6 72 266-367 64-137 (336)
169 3tov_A Glycosyl transferase fa 41.9 1.3E+02 0.0045 28.2 9.9 99 8-134 186-288 (349)
170 2vo1_A CTP synthase 1; pyrimid 41.8 27 0.00091 31.9 4.5 43 5-47 20-65 (295)
171 1zl0_A Hypothetical protein PA 41.7 46 0.0016 31.1 6.4 74 265-368 64-139 (311)
172 3n0v_A Formyltetrahydrofolate 41.6 1.7E+02 0.0057 26.8 10.1 105 5-135 88-197 (286)
173 1q74_A 1D-MYO-inosityl 2-aceta 41.5 87 0.003 28.9 8.4 22 90-111 114-135 (303)
174 2o6l_A UDP-glucuronosyltransfe 41.5 90 0.0031 25.4 7.8 90 8-133 21-113 (170)
175 3hr8_A Protein RECA; alpha and 41.5 54 0.0018 31.3 7.0 38 10-47 64-101 (356)
176 3f6p_A Transcriptional regulat 40.4 42 0.0014 25.4 5.2 39 98-136 39-83 (120)
177 2i2c_A Probable inorganic poly 40.2 23 0.00078 32.4 4.0 28 340-367 36-69 (272)
178 3t6k_A Response regulator rece 40.1 41 0.0014 26.2 5.2 38 99-136 42-88 (136)
179 2vpq_A Acetyl-COA carboxylase; 40.1 62 0.0021 31.6 7.5 97 7-130 1-102 (451)
180 3kjh_A CO dehydrogenase/acetyl 39.9 20 0.0007 31.5 3.6 37 8-44 1-37 (254)
181 1rcu_A Conserved hypothetical 39.9 1.6E+02 0.0056 25.2 9.2 37 331-367 111-150 (195)
182 4gmf_A Yersiniabactin biosynth 39.6 1.1E+02 0.0038 29.2 9.0 63 328-390 57-126 (372)
183 3sju_A Keto reductase; short-c 39.5 1.5E+02 0.0051 26.6 9.6 35 7-44 23-57 (279)
184 3q9l_A Septum site-determining 39.5 29 0.001 30.8 4.6 39 7-45 1-41 (260)
185 3m6m_D Sensory/regulatory prot 39.2 31 0.0011 27.3 4.4 38 98-135 51-99 (143)
186 3i83_A 2-dehydropantoate 2-red 39.0 37 0.0013 31.6 5.4 40 8-53 3-42 (320)
187 3osu_A 3-oxoacyl-[acyl-carrier 38.9 1.9E+02 0.0065 25.2 10.1 35 7-44 3-37 (246)
188 1g3q_A MIND ATPase, cell divis 38.8 33 0.0011 30.0 4.8 38 8-45 2-41 (237)
189 1psw_A ADP-heptose LPS heptosy 38.8 1.8E+02 0.0063 26.7 10.4 101 8-134 181-288 (348)
190 3hwr_A 2-dehydropantoate 2-red 38.5 26 0.0009 32.7 4.3 43 6-53 18-60 (318)
191 2dpo_A L-gulonate 3-dehydrogen 38.3 20 0.00069 33.6 3.4 38 1-44 1-38 (319)
192 3lrx_A Putative hydrogenase; a 37.6 24 0.00081 29.2 3.4 37 7-46 23-59 (158)
193 4huj_A Uncharacterized protein 37.6 18 0.0006 31.8 2.7 34 5-43 21-54 (220)
194 1evy_A Glycerol-3-phosphate de 37.5 15 0.00051 35.1 2.4 35 5-44 13-47 (366)
195 3sc4_A Short chain dehydrogena 37.5 1.7E+02 0.0059 26.2 9.8 34 8-44 9-42 (285)
196 1xmp_A PURE, phosphoribosylami 37.5 1.8E+02 0.0062 24.3 10.4 143 252-443 11-165 (170)
197 2dr3_A UPF0273 protein PH0284; 37.1 2E+02 0.0068 24.7 11.5 42 9-50 25-66 (247)
198 1o97_C Electron transferring f 37.1 37 0.0012 30.9 4.8 42 93-134 100-147 (264)
199 2xw6_A MGS, methylglyoxal synt 36.9 95 0.0033 24.9 6.7 98 6-133 2-112 (134)
200 3obb_A Probable 3-hydroxyisobu 36.8 26 0.00089 32.5 3.9 32 7-43 3-34 (300)
201 1lss_A TRK system potassium up 36.8 29 0.00098 27.2 3.7 33 7-44 4-36 (140)
202 1q57_A DNA primase/helicase; d 36.3 52 0.0018 32.9 6.3 41 10-50 245-286 (503)
203 3ucx_A Short chain dehydrogena 36.0 1.5E+02 0.0051 26.2 9.0 33 9-44 12-44 (264)
204 2pju_A Propionate catabolism o 35.8 68 0.0023 28.3 6.3 29 340-369 64-92 (225)
205 1e2b_A Enzyme IIB-cellobiose; 35.8 68 0.0023 24.5 5.5 39 5-43 1-39 (106)
206 1f0y_A HCDH, L-3-hydroxyacyl-C 35.8 22 0.00076 32.8 3.2 34 6-44 14-47 (302)
207 4hps_A Pyrrolidone-carboxylate 35.8 23 0.00078 31.5 3.1 30 5-34 21-52 (228)
208 1cp2_A CP2, nitrogenase iron p 35.8 35 0.0012 30.6 4.5 37 7-43 1-37 (269)
209 3u9l_A 3-oxoacyl-[acyl-carrier 35.3 1E+02 0.0035 28.6 7.9 32 9-43 6-37 (324)
210 3v2h_A D-beta-hydroxybutyrate 35.1 1.4E+02 0.0047 26.9 8.6 33 8-43 25-57 (281)
211 3icc_A Putative 3-oxoacyl-(acy 35.0 2.1E+02 0.007 24.9 9.7 34 8-44 7-40 (255)
212 1efv_B Electron transfer flavo 35.0 41 0.0014 30.4 4.8 42 93-134 104-151 (255)
213 1xp8_A RECA protein, recombina 34.9 67 0.0023 30.7 6.5 88 9-116 76-163 (366)
214 2zki_A 199AA long hypothetical 34.9 34 0.0012 29.1 4.1 37 6-43 3-40 (199)
215 3k96_A Glycerol-3-phosphate de 34.8 26 0.00089 33.4 3.6 35 5-44 27-61 (356)
216 3a28_C L-2.3-butanediol dehydr 34.6 1E+02 0.0035 27.2 7.6 34 9-45 3-36 (258)
217 3s55_A Putative short-chain de 34.5 1.7E+02 0.0058 26.1 9.1 33 9-44 11-43 (281)
218 3dhn_A NAD-dependent epimerase 34.4 35 0.0012 29.5 4.2 34 7-44 4-37 (227)
219 2w70_A Biotin carboxylase; lig 34.3 82 0.0028 30.7 7.4 97 7-130 2-103 (449)
220 3oid_A Enoyl-[acyl-carrier-pro 34.2 2.2E+02 0.0074 25.1 9.7 33 8-43 4-36 (258)
221 2q5c_A NTRC family transcripti 34.1 61 0.0021 27.8 5.6 32 338-370 50-81 (196)
222 3r3s_A Oxidoreductase; structu 34.1 1.3E+02 0.0044 27.3 8.3 33 9-44 50-82 (294)
223 3k9o_A Ubiquitin-conjugating e 34.0 97 0.0033 26.7 6.9 34 424-461 140-173 (201)
224 1o4v_A Phosphoribosylaminoimid 34.0 2.2E+02 0.0074 24.2 11.2 142 252-442 13-164 (183)
225 4dll_A 2-hydroxy-3-oxopropiona 34.0 43 0.0015 31.2 4.9 34 6-44 30-63 (320)
226 3vps_A TUNA, NAD-dependent epi 33.5 49 0.0017 30.2 5.2 40 1-44 1-40 (321)
227 3ro0_A Pyrrolidone-carboxylate 33.3 44 0.0015 29.6 4.5 28 7-34 2-31 (223)
228 2q6t_A DNAB replication FORK h 33.2 68 0.0023 31.4 6.5 42 9-50 202-244 (444)
229 3goc_A Endonuclease V; alpha-b 33.1 55 0.0019 29.1 5.1 30 104-133 106-142 (237)
230 2h78_A Hibadh, 3-hydroxyisobut 33.1 32 0.0011 31.6 3.9 34 6-44 2-35 (302)
231 3c3m_A Response regulator rece 32.8 60 0.0021 25.1 5.1 37 99-135 41-86 (138)
232 4iiu_A 3-oxoacyl-[acyl-carrier 32.8 1.8E+02 0.006 25.7 8.9 35 7-44 25-59 (267)
233 1p9o_A Phosphopantothenoylcyst 32.8 22 0.00076 33.3 2.6 37 10-46 40-90 (313)
234 1efp_B ETF, protein (electron 32.6 42 0.0014 30.3 4.4 41 93-133 101-147 (252)
235 3pxx_A Carveol dehydrogenase; 32.4 2.1E+02 0.0073 25.4 9.5 34 8-44 10-43 (287)
236 3s2u_A UDP-N-acetylglucosamine 32.3 84 0.0029 29.7 6.8 36 254-291 5-40 (365)
237 3qxc_A Dethiobiotin synthetase 32.3 43 0.0015 29.9 4.4 37 5-41 18-56 (242)
238 3gt7_A Sensor protein; structu 32.2 61 0.0021 25.8 5.1 38 98-135 44-90 (154)
239 3doj_A AT3G25530, dehydrogenas 32.1 39 0.0013 31.3 4.3 35 5-44 19-53 (310)
240 1dbw_A Transcriptional regulat 32.1 67 0.0023 24.3 5.2 39 98-136 40-85 (126)
241 3f6r_A Flavodoxin; FMN binding 31.9 42 0.0014 26.9 4.0 38 7-44 1-39 (148)
242 3kuu_A Phosphoribosylaminoimid 31.7 2.3E+02 0.0079 23.8 9.2 145 253-443 13-166 (174)
243 1z7e_A Protein aRNA; rossmann 31.7 76 0.0026 32.9 6.9 40 96-135 66-106 (660)
244 2afh_E Nitrogenase iron protei 31.7 48 0.0017 30.1 4.8 37 7-43 2-38 (289)
245 3of5_A Dethiobiotin synthetase 31.7 50 0.0017 29.1 4.7 35 7-41 4-39 (228)
246 3ot1_A 4-methyl-5(B-hydroxyeth 31.6 73 0.0025 27.4 5.7 37 7-44 9-45 (208)
247 1hyq_A MIND, cell division inh 31.6 40 0.0014 30.1 4.2 32 14-45 10-41 (263)
248 3eod_A Protein HNR; response r 31.6 72 0.0025 24.2 5.3 38 99-136 45-89 (130)
249 2hmt_A YUAA protein; RCK, KTN, 31.5 28 0.00097 27.4 2.8 34 6-44 5-38 (144)
250 4e12_A Diketoreductase; oxidor 31.5 37 0.0013 31.0 3.9 35 5-44 2-36 (283)
251 3cg4_A Response regulator rece 31.5 75 0.0026 24.5 5.5 39 1-43 1-39 (142)
252 2q62_A ARSH; alpha/beta, flavo 31.5 57 0.002 29.2 5.1 40 4-43 31-73 (247)
253 3dfu_A Uncharacterized protein 31.3 40 0.0014 30.0 4.0 35 5-44 4-38 (232)
254 3p32_A Probable GTPase RV1496/ 31.2 65 0.0022 30.5 5.8 40 6-45 78-117 (355)
255 1gsa_A Glutathione synthetase; 30.8 36 0.0012 31.1 3.8 38 7-44 1-41 (316)
256 2r6j_A Eugenol synthase 1; phe 30.6 52 0.0018 30.2 4.9 33 9-45 13-45 (318)
257 3giu_A Pyrrolidone-carboxylate 30.5 46 0.0016 29.2 4.2 68 6-114 2-71 (215)
258 3nhm_A Response regulator; pro 30.4 79 0.0027 24.0 5.4 38 98-135 40-86 (133)
259 4dgk_A Phytoene dehydrogenase; 30.4 23 0.00079 35.1 2.5 31 7-42 1-31 (501)
260 1t35_A Hypothetical protein YV 30.3 2.2E+02 0.0076 24.1 8.5 103 240-367 23-135 (191)
261 1xrs_B D-lysine 5,6-aminomutas 30.3 2.1E+02 0.0072 25.8 8.7 48 6-53 119-175 (262)
262 2qyt_A 2-dehydropantoate 2-red 30.2 23 0.00078 32.7 2.3 33 6-43 7-45 (317)
263 3tla_A MCCF; serine protease, 30.1 59 0.002 31.2 5.2 73 265-367 93-167 (371)
264 1ulz_A Pyruvate carboxylase N- 29.7 1.3E+02 0.0046 29.1 8.1 96 7-130 2-102 (451)
265 3pgx_A Carveol dehydrogenase; 29.7 2.1E+02 0.0073 25.4 9.0 32 9-43 16-47 (280)
266 2r85_A PURP protein PF1517; AT 29.6 48 0.0016 30.7 4.5 34 7-46 2-35 (334)
267 3a10_A Response regulator; pho 29.6 92 0.0031 22.9 5.5 37 99-135 39-82 (116)
268 3oti_A CALG3; calicheamicin, T 29.6 1.6E+02 0.0055 27.7 8.4 90 8-132 232-325 (398)
269 2w36_A Endonuclease V; hypoxan 29.6 68 0.0023 28.3 5.1 30 104-133 102-138 (225)
270 1tmy_A CHEY protein, TMY; chem 29.4 70 0.0024 23.8 4.8 38 99-136 41-85 (120)
271 3sx2_A Putative 3-ketoacyl-(ac 29.4 1.5E+02 0.0051 26.4 7.8 33 9-44 14-46 (278)
272 1a2z_A Pyrrolidone carboxyl pe 29.2 53 0.0018 28.9 4.4 28 7-34 1-30 (220)
273 4da9_A Short-chain dehydrogena 29.0 2.1E+02 0.0072 25.6 8.8 33 8-43 29-61 (280)
274 2vqe_B 30S ribosomal protein S 28.9 3.2E+02 0.011 24.5 9.9 31 104-134 157-189 (256)
275 3lou_A Formyltetrahydrofolate 28.8 2E+02 0.0069 26.3 8.5 104 5-134 93-201 (292)
276 1zgz_A Torcad operon transcrip 28.8 74 0.0025 23.8 4.8 39 98-136 39-83 (122)
277 3fet_A Electron transfer flavo 28.8 71 0.0024 26.6 4.9 40 92-133 58-100 (166)
278 3eod_A Protein HNR; response r 28.8 1.1E+02 0.0037 23.1 5.9 39 1-43 1-39 (130)
279 2ph1_A Nucleotide-binding prot 28.8 54 0.0019 29.3 4.6 41 6-46 16-58 (262)
280 3rpe_A MDAB, modulator of drug 28.6 64 0.0022 28.3 4.8 42 2-43 20-68 (218)
281 3v8b_A Putative dehydrogenase, 28.6 3.2E+02 0.011 24.4 10.2 34 8-44 28-61 (283)
282 1wcv_1 SOJ, segregation protei 28.4 47 0.0016 29.6 4.0 39 7-45 5-45 (257)
283 3oow_A Phosphoribosylaminoimid 28.4 2.6E+02 0.0088 23.3 10.4 145 253-443 6-159 (166)
284 1ihu_A Arsenical pump-driving 28.3 47 0.0016 33.9 4.5 45 1-45 1-46 (589)
285 3ic5_A Putative saccharopine d 28.2 45 0.0015 25.1 3.4 94 7-135 5-102 (118)
286 3pdu_A 3-hydroxyisobutyrate de 28.2 47 0.0016 30.2 4.1 33 7-44 1-33 (287)
287 4hn9_A Iron complex transport 28.2 64 0.0022 30.1 5.1 36 99-134 110-145 (335)
288 3fwz_A Inner membrane protein 28.2 46 0.0016 26.5 3.5 34 7-45 7-40 (140)
289 3end_A Light-independent proto 28.1 63 0.0022 29.6 5.0 38 7-44 41-78 (307)
290 1dhr_A Dihydropteridine reduct 28.0 54 0.0019 28.7 4.4 34 8-44 7-40 (241)
291 4e7p_A Response regulator; DNA 28.0 81 0.0028 24.8 5.1 42 95-136 56-104 (150)
292 1qyd_A Pinoresinol-lariciresin 27.9 56 0.0019 29.7 4.6 35 7-45 4-38 (313)
293 3sxp_A ADP-L-glycero-D-mannohe 27.7 2E+02 0.0068 26.6 8.7 37 4-44 7-45 (362)
294 1b93_A Protein (methylglyoxal 27.6 1.7E+02 0.0057 24.1 6.8 96 7-132 11-119 (152)
295 1vhq_A Enhancing lycopene bios 27.4 1.1E+02 0.0038 26.8 6.3 40 5-45 4-48 (232)
296 3ea0_A ATPase, para family; al 27.2 47 0.0016 29.1 3.8 39 7-45 3-44 (245)
297 3ius_A Uncharacterized conserv 27.1 1.2E+02 0.0042 27.0 6.7 34 7-45 5-38 (286)
298 1u94_A RECA protein, recombina 27.1 1.2E+02 0.0041 28.8 6.8 39 9-47 65-103 (356)
299 1u11_A PURE (N5-carboxyaminoim 27.0 2.9E+02 0.0098 23.4 9.0 142 253-443 22-175 (182)
300 1iow_A DD-ligase, DDLB, D-ALA\ 27.0 74 0.0025 28.8 5.3 38 7-44 2-43 (306)
301 3v2g_A 3-oxoacyl-[acyl-carrier 27.0 3.3E+02 0.011 24.1 9.7 33 9-44 32-64 (271)
302 3aek_B Light-independent proto 27.0 1.9E+02 0.0064 29.1 8.6 91 7-132 280-373 (525)
303 2qxy_A Response regulator; reg 26.9 79 0.0027 24.4 4.8 39 95-134 38-83 (142)
304 1hdo_A Biliverdin IX beta redu 26.9 95 0.0032 25.9 5.7 33 8-44 4-36 (206)
305 3l4e_A Uncharacterized peptida 26.8 1.1E+02 0.0037 26.5 6.0 46 242-287 18-63 (206)
306 3b2n_A Uncharacterized protein 26.7 72 0.0025 24.5 4.5 38 99-136 43-87 (133)
307 1ehi_A LMDDL2, D-alanine:D-lac 26.6 53 0.0018 31.4 4.3 38 6-43 2-44 (377)
308 1ydh_A AT5G11950; structural g 26.6 1.3E+02 0.0046 26.2 6.5 91 252-365 40-141 (216)
309 2hh6_A BH3980 protein; 1017660 26.5 72 0.0025 24.8 4.1 34 409-442 4-37 (113)
310 4hb9_A Similarities with proba 26.4 40 0.0014 32.0 3.4 30 8-42 2-31 (412)
311 3i42_A Response regulator rece 26.4 77 0.0026 23.9 4.6 38 97-134 39-85 (127)
312 1xhf_A DYE resistance, aerobic 26.3 97 0.0033 23.1 5.2 38 99-136 41-84 (123)
313 2a9o_A Response regulator; ess 26.3 90 0.0031 23.0 4.9 38 99-136 39-82 (120)
314 3bbn_B Ribosomal protein S2; s 26.2 3.3E+02 0.011 23.9 9.0 30 105-134 157-188 (231)
315 2qzj_A Two-component response 26.2 86 0.0029 24.2 4.9 38 99-136 42-85 (136)
316 2pl1_A Transcriptional regulat 26.1 1.1E+02 0.0039 22.5 5.5 39 98-136 37-82 (121)
317 3pid_A UDP-glucose 6-dehydroge 26.0 42 0.0014 33.0 3.4 36 3-44 32-67 (432)
318 2q8p_A Iron-regulated surface 25.9 53 0.0018 29.2 3.9 36 99-134 54-90 (260)
319 3rqi_A Response regulator prot 25.9 71 0.0024 26.4 4.5 38 99-136 45-89 (184)
320 3ioy_A Short-chain dehydrogena 25.8 83 0.0028 29.1 5.4 34 8-44 8-41 (319)
321 2gk4_A Conserved hypothetical 25.8 45 0.0015 29.7 3.3 26 18-45 28-53 (232)
322 3hv2_A Response regulator/HD d 25.8 78 0.0027 25.0 4.6 39 98-136 51-96 (153)
323 1z82_A Glycerol-3-phosphate de 25.7 46 0.0016 31.1 3.6 33 7-44 14-46 (335)
324 3gk3_A Acetoacetyl-COA reducta 25.7 2.9E+02 0.0099 24.3 9.0 35 7-44 24-58 (269)
325 1tvm_A PTS system, galactitol- 25.7 1.4E+02 0.0047 22.9 5.8 39 4-42 18-57 (113)
326 1yb4_A Tartronic semialdehyde 25.7 59 0.002 29.5 4.3 32 6-42 2-33 (295)
327 3lzw_A Ferredoxin--NADP reduct 25.7 22 0.00074 32.8 1.2 35 6-45 6-40 (332)
328 3qsg_A NAD-binding phosphogluc 25.6 35 0.0012 31.7 2.7 35 5-44 22-57 (312)
329 2pnf_A 3-oxoacyl-[acyl-carrier 25.5 95 0.0032 27.0 5.5 40 1-44 1-40 (248)
330 3ai3_A NADPH-sorbose reductase 25.5 1.2E+02 0.004 26.9 6.2 40 1-44 1-40 (263)
331 1srr_A SPO0F, sporulation resp 25.5 74 0.0025 23.9 4.3 38 99-136 41-85 (124)
332 3cky_A 2-hydroxymethyl glutara 25.5 68 0.0023 29.2 4.7 33 6-43 3-35 (301)
333 3qha_A Putative oxidoreductase 25.4 45 0.0015 30.6 3.3 33 7-44 15-47 (296)
334 4gxh_A Pyrrolidone-carboxylate 25.3 43 0.0015 29.4 3.0 27 7-33 2-30 (216)
335 2etv_A Iron(III) ABC transport 25.3 51 0.0017 31.0 3.8 35 99-133 90-125 (346)
336 3md9_A Hemin-binding periplasm 25.3 62 0.0021 28.7 4.2 35 99-133 53-89 (255)
337 2raf_A Putative dinucleotide-b 25.3 55 0.0019 28.3 3.8 34 6-44 18-51 (209)
338 4imr_A 3-oxoacyl-(acyl-carrier 25.2 2.2E+02 0.0075 25.4 8.1 33 9-44 34-66 (275)
339 3k9g_A PF-32 protein; ssgcid, 25.2 67 0.0023 28.6 4.5 39 6-45 25-65 (267)
340 1f9y_A HPPK, protein (6-hydrox 25.1 72 0.0025 26.5 4.2 29 254-282 2-30 (158)
341 3psh_A Protein HI_1472; substr 25.1 57 0.002 30.2 4.1 35 99-133 78-113 (326)
342 4g6h_A Rotenone-insensitive NA 25.1 39 0.0014 33.8 3.1 36 6-46 41-76 (502)
343 1ydg_A Trp repressor binding p 25.0 84 0.0029 26.8 5.0 39 5-43 4-43 (211)
344 3ga2_A Endonuclease V; alpha-b 25.0 68 0.0023 28.7 4.2 40 92-133 98-144 (246)
345 3e9m_A Oxidoreductase, GFO/IDH 25.0 3.9E+02 0.013 24.4 10.1 111 253-390 7-125 (330)
346 4grd_A N5-CAIR mutase, phospho 24.9 3.1E+02 0.01 23.0 9.4 148 251-442 11-165 (173)
347 3uve_A Carveol dehydrogenase ( 24.9 3.6E+02 0.012 23.8 10.6 33 8-43 11-43 (286)
348 3ksu_A 3-oxoacyl-acyl carrier 24.8 1.6E+02 0.0053 26.1 6.9 33 8-43 11-43 (262)
349 3ip0_A 2-amino-4-hydroxy-6-hyd 24.8 73 0.0025 26.4 4.2 29 254-282 2-30 (158)
350 2vrn_A Protease I, DR1199; cys 24.8 1.5E+02 0.0052 24.7 6.5 40 5-45 7-46 (190)
351 2c5m_A CTP synthase; cytidine 24.7 62 0.0021 29.3 3.8 41 6-46 21-64 (294)
352 1cyd_A Carbonyl reductase; sho 24.7 1.1E+02 0.0039 26.4 5.9 40 1-44 1-40 (244)
353 3r1i_A Short-chain type dehydr 24.6 2.8E+02 0.0096 24.7 8.7 33 9-44 33-65 (276)
354 4dhx_B Enhancer of yellow 2 tr 24.5 62 0.0021 24.6 3.4 55 406-460 9-73 (101)
355 3ax6_A Phosphoribosylaminoimid 24.5 94 0.0032 29.4 5.6 34 7-45 1-34 (380)
356 2qx0_A 7,8-dihydro-6-hydroxyme 24.5 91 0.0031 25.9 4.7 29 254-282 3-31 (159)
357 3crn_A Response regulator rece 24.4 1.1E+02 0.0036 23.4 5.1 38 99-136 41-85 (132)
358 2z04_A Phosphoribosylaminoimid 24.4 76 0.0026 29.8 4.9 34 7-45 1-34 (365)
359 2lnd_A De novo designed protei 24.4 81 0.0028 22.6 3.7 49 358-418 50-100 (112)
360 3db2_A Putative NADPH-dependen 24.3 2.8E+02 0.0095 25.8 8.9 111 253-391 7-125 (354)
361 1e4e_A Vancomycin/teicoplanin 24.2 44 0.0015 31.4 3.1 39 6-44 2-44 (343)
362 2z1n_A Dehydrogenase; reductas 24.2 1.3E+02 0.0043 26.6 6.2 40 1-44 1-40 (260)
363 3zzm_A Bifunctional purine bio 24.2 1E+02 0.0035 30.8 5.7 40 8-53 11-50 (523)
364 1ks9_A KPA reductase;, 2-dehyd 24.2 55 0.0019 29.5 3.8 32 8-44 1-32 (291)
365 4e21_A 6-phosphogluconate dehy 24.2 50 0.0017 31.4 3.5 35 5-44 20-54 (358)
366 4fn4_A Short chain dehydrogena 24.2 3.5E+02 0.012 24.0 9.1 34 8-44 7-40 (254)
367 1qo0_D AMIR; binding protein, 24.1 3E+02 0.01 22.6 8.5 48 358-419 78-125 (196)
368 2gdz_A NAD+-dependent 15-hydro 24.1 1.2E+02 0.0041 26.9 6.0 40 1-44 1-40 (267)
369 2hy5_A Putative sulfurtransfer 24.0 1.3E+02 0.0043 23.6 5.5 29 19-47 15-44 (130)
370 2ip4_A PURD, phosphoribosylami 24.0 1.9E+02 0.0065 27.6 7.8 86 8-131 1-90 (417)
371 3f67_A Putative dienelactone h 24.0 87 0.003 26.6 4.9 36 8-43 32-67 (241)
372 3c1o_A Eugenol synthase; pheny 24.0 73 0.0025 29.2 4.6 35 7-45 4-38 (321)
373 4gbj_A 6-phosphogluconate dehy 23.8 68 0.0023 29.5 4.3 29 9-42 7-35 (297)
374 3cu5_A Two component transcrip 23.8 92 0.0031 24.2 4.6 36 99-134 43-85 (141)
375 1qkk_A DCTD, C4-dicarboxylate 23.6 96 0.0033 24.4 4.8 42 95-136 37-85 (155)
376 2fb6_A Conserved hypothetical 23.6 68 0.0023 25.0 3.6 42 7-48 7-52 (117)
377 3kvo_A Hydroxysteroid dehydrog 23.6 3.3E+02 0.011 25.3 9.3 33 9-44 46-78 (346)
378 1eiw_A Hypothetical protein MT 23.5 1.3E+02 0.0043 23.3 5.1 65 335-418 36-109 (111)
379 3e46_A Ubiquitin-conjugating e 23.5 1.8E+02 0.0062 26.1 6.9 34 424-461 192-225 (253)
380 1mb3_A Cell division response 23.5 81 0.0028 23.6 4.1 36 99-134 39-83 (124)
381 3oec_A Carveol dehydrogenase ( 23.5 2.9E+02 0.01 25.2 8.8 32 9-43 47-78 (317)
382 3q2i_A Dehydrogenase; rossmann 23.4 4.4E+02 0.015 24.3 10.2 129 252-420 14-151 (354)
383 3qvl_A Putative hydantoin race 23.4 3E+02 0.01 24.3 8.4 94 8-132 2-97 (245)
384 3lac_A Pyrrolidone-carboxylate 23.4 79 0.0027 27.7 4.4 27 7-33 1-29 (215)
385 3b6i_A Flavoprotein WRBA; flav 23.3 82 0.0028 26.5 4.5 37 7-43 1-39 (198)
386 2i87_A D-alanine-D-alanine lig 23.3 38 0.0013 32.2 2.5 39 6-44 2-44 (364)
387 3cz5_A Two-component response 23.3 1.3E+02 0.0043 23.6 5.5 39 98-136 44-89 (153)
388 3sbx_A Putative uncharacterize 23.3 3.3E+02 0.011 23.1 8.2 43 323-366 92-145 (189)
389 3ego_A Probable 2-dehydropanto 23.2 65 0.0022 29.7 4.0 41 7-53 2-43 (307)
390 1hjr_A Holliday junction resol 23.1 91 0.0031 25.8 4.5 51 85-135 39-104 (158)
391 3cmu_A Protein RECA, recombina 23.0 1.8E+02 0.006 34.7 8.2 90 6-115 1426-1515(2050)
392 2pd6_A Estradiol 17-beta-dehyd 23.0 1.4E+02 0.0047 26.2 6.2 40 1-44 1-40 (264)
393 2an1_A Putative kinase; struct 23.0 49 0.0017 30.3 3.1 31 335-367 61-95 (292)
394 3cmw_A Protein RECA, recombina 22.8 3E+02 0.01 32.1 10.0 104 10-133 386-517 (1706)
395 3e1t_A Halogenase; flavoprotei 22.8 39 0.0013 33.8 2.5 39 1-44 1-39 (512)
396 1p6q_A CHEY2; chemotaxis, sign 22.7 92 0.0031 23.5 4.4 37 99-135 45-90 (129)
397 1wek_A Hypothetical protein TT 22.7 2.3E+02 0.0079 24.6 7.3 88 252-365 68-168 (217)
398 1jbe_A Chemotaxis protein CHEY 22.7 1.3E+02 0.0043 22.6 5.2 37 99-135 43-88 (128)
399 3uf0_A Short-chain dehydrogena 22.6 2.2E+02 0.0074 25.4 7.5 33 9-44 32-64 (273)
400 3hbl_A Pyruvate carboxylase; T 22.6 3.1E+02 0.011 30.5 9.9 99 7-130 4-106 (1150)
401 4e3z_A Putative oxidoreductase 22.6 88 0.003 27.9 4.8 36 5-43 23-58 (272)
402 3op4_A 3-oxoacyl-[acyl-carrier 22.6 1.1E+02 0.0038 26.8 5.4 41 1-44 1-42 (248)
403 3lte_A Response regulator; str 22.5 1.3E+02 0.0044 22.7 5.3 25 99-123 44-70 (132)
404 1x10_A Pyrrolidone-carboxylate 22.5 76 0.0026 27.6 4.0 27 8-34 1-29 (208)
405 2z43_A DNA repair and recombin 22.5 4.4E+02 0.015 24.0 9.9 93 8-116 108-214 (324)
406 3u9t_A MCC alpha, methylcroton 22.5 2.2E+02 0.0077 29.5 8.4 98 7-130 28-129 (675)
407 3hdv_A Response regulator; PSI 22.4 1.3E+02 0.0046 22.8 5.4 40 1-44 1-40 (136)
408 3cfy_A Putative LUXO repressor 22.3 97 0.0033 23.9 4.5 37 99-135 42-85 (137)
409 3zq6_A Putative arsenical pump 22.3 80 0.0027 29.4 4.5 38 8-45 14-52 (324)
410 2gas_A Isoflavone reductase; N 22.3 68 0.0023 29.0 4.0 35 7-45 2-36 (307)
411 1nff_A Putative oxidoreductase 22.3 1.4E+02 0.0047 26.5 6.0 40 1-44 1-40 (260)
412 1iu8_A Pyrrolidone-carboxylate 22.3 1.2E+02 0.0039 26.4 5.2 63 8-113 1-65 (206)
413 1qyc_A Phenylcoumaran benzylic 22.2 79 0.0027 28.6 4.4 34 7-44 4-37 (308)
414 3f5d_A Protein YDEA; unknow pr 22.0 66 0.0023 27.8 3.6 40 6-46 2-42 (206)
415 3cg0_A Response regulator rece 22.0 1E+02 0.0036 23.5 4.6 38 99-136 48-92 (140)
416 3g79_A NDP-N-acetyl-D-galactos 21.9 87 0.003 31.2 4.8 36 5-45 16-53 (478)
417 3l4b_C TRKA K+ channel protien 21.9 37 0.0013 29.4 2.0 33 8-45 1-33 (218)
418 3pdi_A Nitrogenase MOFE cofact 21.8 65 0.0022 32.1 3.9 36 94-132 390-425 (483)
419 3qbc_A 2-amino-4-hydroxy-6-hyd 21.8 90 0.0031 26.0 4.1 29 254-282 6-34 (161)
420 2ae2_A Protein (tropinone redu 21.8 1.1E+02 0.0037 27.1 5.2 33 9-44 10-42 (260)
421 3n53_A Response regulator rece 21.8 74 0.0025 24.6 3.7 38 98-135 39-85 (140)
422 3o26_A Salutaridine reductase; 21.8 86 0.0029 28.4 4.6 35 7-44 11-45 (311)
423 2zr9_A Protein RECA, recombina 21.8 2.9E+02 0.0098 25.9 8.4 40 8-47 62-101 (349)
424 3edm_A Short chain dehydrogena 21.7 95 0.0033 27.5 4.8 34 8-44 8-41 (259)
425 3qjg_A Epidermin biosynthesis 21.7 3.5E+02 0.012 22.5 9.7 112 253-384 7-141 (175)
426 3trh_A Phosphoribosylaminoimid 21.6 3.5E+02 0.012 22.5 9.8 142 252-440 6-157 (169)
427 3dm5_A SRP54, signal recogniti 21.6 1.1E+02 0.0037 30.1 5.4 42 7-48 100-141 (443)
428 1vmd_A MGS, methylglyoxal synt 21.5 1.9E+02 0.0064 24.4 6.1 95 8-132 28-135 (178)
429 3t7c_A Carveol dehydrogenase; 21.5 4.4E+02 0.015 23.6 11.4 34 8-44 28-61 (299)
430 2b4a_A BH3024; flavodoxin-like 21.4 1.1E+02 0.0038 23.4 4.7 38 96-133 50-95 (138)
431 3u7q_A Nitrogenase molybdenum- 21.4 72 0.0025 31.9 4.1 35 95-132 407-441 (492)
432 4eg0_A D-alanine--D-alanine li 21.4 1.1E+02 0.0037 28.2 5.2 38 7-44 13-54 (317)
433 1cbk_A Protein (7,8-dihydro-6- 21.3 88 0.003 26.0 4.0 29 254-282 3-31 (160)
434 3dtt_A NADP oxidoreductase; st 21.3 53 0.0018 29.1 2.9 35 5-44 17-51 (245)
435 1yt5_A Inorganic polyphosphate 21.3 39 0.0013 30.5 2.0 51 341-419 43-96 (258)
436 3dff_A Teicoplanin pseudoaglyc 21.3 87 0.003 28.4 4.4 42 91-132 134-185 (273)
437 2r7a_A Bacterial heme binding 21.3 83 0.0028 27.8 4.2 35 99-133 53-89 (256)
438 3d3w_A L-xylulose reductase; u 21.2 1.6E+02 0.0055 25.4 6.2 40 1-44 1-40 (244)
439 4dad_A Putative pilus assembly 21.1 80 0.0027 24.6 3.8 40 96-135 57-104 (146)
440 1u0t_A Inorganic polyphosphate 21.1 41 0.0014 31.2 2.1 32 333-366 71-106 (307)
441 1pno_A NAD(P) transhydrogenase 21.0 93 0.0032 26.0 3.9 37 8-44 24-63 (180)
442 4eso_A Putative oxidoreductase 21.0 1.1E+02 0.0036 27.2 4.9 33 9-44 9-41 (255)
443 4gi5_A Quinone reductase; prot 20.9 1.4E+02 0.0048 27.2 5.7 37 5-41 20-59 (280)
444 3r6d_A NAD-dependent epimerase 20.9 1E+02 0.0035 26.3 4.7 21 24-44 18-39 (221)
445 2pju_A Propionate catabolism o 20.9 2.1E+02 0.0073 25.0 6.7 35 97-134 146-180 (225)
446 1yio_A Response regulatory pro 20.9 99 0.0034 25.9 4.5 36 99-134 42-84 (208)
447 2ehd_A Oxidoreductase, oxidore 20.8 1.2E+02 0.004 26.2 5.1 35 7-44 4-38 (234)
448 3mt0_A Uncharacterized protein 20.8 4.4E+02 0.015 23.3 9.4 106 7-132 7-126 (290)
449 3c24_A Putative oxidoreductase 20.8 85 0.0029 28.4 4.3 33 7-44 11-44 (286)
450 1y1p_A ARII, aldehyde reductas 20.8 1.5E+02 0.005 27.1 6.1 36 5-44 9-44 (342)
451 4hcj_A THIJ/PFPI domain protei 20.7 1.6E+02 0.0054 24.7 5.6 39 6-45 6-45 (177)
452 2a33_A Hypothetical protein; s 20.7 4.1E+02 0.014 22.9 9.0 91 252-365 44-145 (215)
453 3gi1_A LBP, laminin-binding pr 20.7 3.2E+02 0.011 24.7 8.3 41 94-134 217-259 (286)
454 1d4o_A NADP(H) transhydrogenas 20.6 95 0.0033 26.0 3.9 37 8-44 23-62 (184)
455 3s40_A Diacylglycerol kinase; 20.6 1.2E+02 0.0041 27.9 5.3 27 341-367 65-97 (304)
456 1zi8_A Carboxymethylenebutenol 20.5 1.1E+02 0.0039 25.7 4.9 37 8-44 28-64 (236)
457 2qv7_A Diacylglycerol kinase D 20.5 1.1E+02 0.0037 28.6 5.1 27 341-367 82-114 (337)
458 3alj_A 2-methyl-3-hydroxypyrid 20.4 65 0.0022 30.4 3.5 35 5-44 9-43 (379)
459 3i4f_A 3-oxoacyl-[acyl-carrier 20.4 1.3E+02 0.0045 26.5 5.5 35 7-44 6-40 (264)
460 3c97_A Signal transduction his 20.3 1.5E+02 0.005 22.8 5.2 25 99-123 48-74 (140)
461 3lk7_A UDP-N-acetylmuramoylala 20.3 1.1E+02 0.0038 29.9 5.3 33 6-43 8-40 (451)
462 1byi_A Dethiobiotin synthase; 20.3 1.1E+02 0.0036 26.3 4.6 32 10-41 4-36 (224)
463 2vns_A Metalloreductase steap3 20.3 70 0.0024 27.7 3.4 34 6-44 27-60 (215)
464 2rjn_A Response regulator rece 20.3 2.6E+02 0.009 21.6 6.9 48 358-419 78-126 (154)
465 3e18_A Oxidoreductase; dehydro 20.2 5.1E+02 0.017 24.0 9.9 63 328-390 54-123 (359)
466 3jy6_A Transcriptional regulat 20.2 4.3E+02 0.015 22.9 10.3 44 1-44 1-46 (276)
467 1k68_A Phytochrome response re 20.2 1.6E+02 0.0056 22.1 5.5 33 104-136 54-95 (140)
468 3tsc_A Putative oxidoreductase 20.2 4.5E+02 0.015 23.1 11.1 32 9-43 12-43 (277)
469 3qua_A Putative uncharacterize 20.2 4E+02 0.014 22.7 8.2 44 323-367 101-155 (199)
470 3orf_A Dihydropteridine reduct 20.1 95 0.0033 27.4 4.4 35 7-44 21-55 (251)
471 3s40_A Diacylglycerol kinase; 20.1 1.4E+02 0.0047 27.4 5.6 44 1-45 3-49 (304)
472 2j48_A Two-component sensor ki 20.1 1.4E+02 0.0048 21.6 4.9 37 99-135 39-84 (119)
473 2jba_A Phosphate regulon trans 20.1 99 0.0034 23.1 4.0 38 98-135 39-85 (127)
474 4hkt_A Inositol 2-dehydrogenas 20.0 5E+02 0.017 23.6 9.8 64 328-391 52-122 (331)
475 3ip3_A Oxidoreductase, putativ 20.0 3.8E+02 0.013 24.6 8.9 63 328-390 56-127 (337)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=5.8e-60 Score=480.25 Aligned_cols=410 Identities=26% Similarity=0.387 Sum_probs=319.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCC----C-C
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHG--AKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIE----I-P 78 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~-~ 78 (464)
++.||+++|+|++||++|++.||+.|+++| +.|||++++.+...+.+... ....+++|+.+| +++. . .
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~---~~~~~i~~~~ip--dglp~~~~~~~ 86 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---EFLPNIKYYNVH--DGLPKGYVSSG 86 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS---CCCTTEEEEECC--CCCCTTCCCCS
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc---cCCCCceEEecC--CCCCCCccccC
Confidence 468999999999999999999999999999 99999998765544433210 112468888876 3432 1 1
Q ss_pred C-CCCcccHHHHHh-hhHHHHHHhhhh--CCCCEEEeCCCchhhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCC
Q 048562 79 D-TDMSATPRTDTS-MLQEPLKSLLVD--SRPDCIVHDMFHHWSADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEK 154 (464)
Q Consensus 79 ~-~~~~~~~~~~~~-~~~~~l~~~l~~--~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 154 (464)
. ......+..... .+.+.+.+++++ .++|+||+|.+.+|+..+|+++|||++.+++.+++.+..+.+.+.......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~ 166 (454)
T 3hbf_A 87 NPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTG 166 (454)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcC
Confidence 1 111222222222 234445555443 579999999999999999999999999999999888877665443211100
Q ss_pred --CCCCCCce-ecCCCCC--------cccc-Ch--------hhhhhhccccEEEEcCccccChHHHHHHHhhhCCCCeEE
Q 048562 155 --VSSDYEPF-VVPGLPD--------KIEL-TA--------LSFRFEEKSFGIVVNSFYDLEPAYVEYFKQDLGNDKAWF 214 (464)
Q Consensus 155 --~~~~~~~~-~~p~~~~--------~~~~-~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~ 214 (464)
......+. .+|+++. .+.. .. +.+....+.+++++|+|++|++++++.++..+ +++++
T Consensus 167 ~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~--~~v~~ 244 (454)
T 3hbf_A 167 SKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF--KLLLN 244 (454)
T ss_dssp HHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS--SCEEE
T ss_pred CCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC--CCEEE
Confidence 00011222 2555432 1110 00 01255677889999999999999999888776 79999
Q ss_pred eCcccccccCcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCC
Q 048562 215 VGPVSLCNRNIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQS 294 (464)
Q Consensus 215 vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~ 294 (464)
|||+....+.. ....++++.+||+..+++++|||||||+...+.+++.+++.+|++.+++|||+++..
T Consensus 245 vGPl~~~~~~~---------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~--- 312 (454)
T 3hbf_A 245 VGPFNLTTPQR---------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD--- 312 (454)
T ss_dssp CCCHHHHSCCS---------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC---
T ss_pred ECCcccccccc---------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc---
Confidence 99987543211 011356789999988889999999999999888999999999999999999999875
Q ss_pred CCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchh
Q 048562 295 PGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSN 374 (464)
Q Consensus 295 ~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~n 374 (464)
... .+|++|.++. ++|+++++|+||.+||+|+++++||||||+||++|++++|||||++|+++||+.|
T Consensus 313 --------~~~-~lp~~~~~~~---~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~N 380 (454)
T 3hbf_A 313 --------PKE-KLPKGFLERT---KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLN 380 (454)
T ss_dssp --------HHH-HSCTTHHHHT---TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred --------chh-cCCHhHHhhc---CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHH
Confidence 111 2888888776 6789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhh-hcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Q 048562 375 EKLISDV-LKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDAEA 453 (464)
Q Consensus 375 a~~v~~~-~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~ 453 (464)
|++++ + +|+|+.++.. .+++++|.++|+++|+| +++++||+||++|++.+++++++|||+..++++
T Consensus 381 a~~v~-~~~g~Gv~l~~~-----------~~~~~~l~~av~~ll~~-~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~ 447 (454)
T 3hbf_A 381 TILTE-SVLEIGVGVDNG-----------VLTKESIKKALELTMSS-EKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTT 447 (454)
T ss_dssp HHHHH-TTSCSEEECGGG-----------SCCHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred HHHHH-HhhCeeEEecCC-----------CCCHHHHHHHHHHHHCC-ChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHH
Confidence 99995 7 6999999875 79999999999999986 577899999999999999999999999999999
Q ss_pred HHHHHH
Q 048562 454 LLQELK 459 (464)
Q Consensus 454 l~~~~~ 459 (464)
|++++.
T Consensus 448 ~v~~i~ 453 (454)
T 3hbf_A 448 LIQIVT 453 (454)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 999985
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.5e-56 Score=461.68 Aligned_cols=434 Identities=28% Similarity=0.439 Sum_probs=311.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEeCCc--chhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCC-
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH-GAKSTIITSPK--HALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDT- 80 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~- 80 (464)
.+++||+++|++++||++|++.||++|++| ||+|||+++.. +...+..... ..+.+++++.++..+.-+....
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~~~~~~~~~ 80 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVDLTDLSSST 80 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCCCTTSCTTC
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCCCCCCCCch
Confidence 467899999999999999999999999998 99999999887 3344433100 0023688888874321011111
Q ss_pred CCcccHHHHHhhhHHHHHHhhhh----CCC-CEEEeCCCchhhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCC--CC
Q 048562 81 DMSATPRTDTSMLQEPLKSLLVD----SRP-DCIVHDMFHHWSADVINSMNIPRIVFNGNCCFSRCILENVRKYKP--HE 153 (464)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~----~~p-D~Vi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~--~~ 153 (464)
.....+......+.+.+++++++ .++ |+||+|.++.++..+|+++|||++.++++++.....+.+.+.... ..
T Consensus 81 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 81 RIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp CHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 11122223344456777777766 478 999999998889999999999999999998776655544332110 00
Q ss_pred CCCCCCCceecCCCCCcc------ccCh----------hhhhhhccccEEEEcCccccChHHHHHHHhhhC-CCCeEEeC
Q 048562 154 KVSSDYEPFVVPGLPDKI------ELTA----------LSFRFEEKSFGIVVNSFYDLEPAYVEYFKQDLG-NDKAWFVG 216 (464)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~------~~~~----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~v~~vG 216 (464)
.......+..+|+++... .+.. ..+..+.+..++++|++.++++..+..+....+ .+++++||
T Consensus 161 ~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~~vG 240 (480)
T 2vch_A 161 EFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVG 240 (480)
T ss_dssp CGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEECC
T ss_pred cccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEEEEe
Confidence 000001112334332210 0100 012345567889999999999987776654100 26899999
Q ss_pred cccccccCcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCC
Q 048562 217 PVSLCNRNIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPG 296 (464)
Q Consensus 217 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~ 296 (464)
|+....... . .+..++++.+||+..+++++|||||||+...+.+++.+++++|++++++|||+++.....-.
T Consensus 241 pl~~~~~~~-~-------~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~ 312 (480)
T 2vch_A 241 PLVNIGKQE-A-------KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIAN 312 (480)
T ss_dssp CCCCCSCSC-C------------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTT
T ss_pred ccccccccc-c-------CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccccc
Confidence 987542110 0 01245688999998877899999999999888899999999999999999999976400000
Q ss_pred -CCc---CCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccc
Q 048562 297 -TRK---ENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQF 372 (464)
Q Consensus 297 -~~~---~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~ 372 (464)
... ........+|+++.++.. ..++.+.+|+||.+||+|+++++||||||+||++||+++|||||++|+++||+
T Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~~--~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~ 390 (480)
T 2vch_A 313 SSYFDSHSQTDPLTFLPPGFLERTK--KRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQK 390 (480)
T ss_dssp TTTTCC--CSCGGGGSCTTHHHHTT--TTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred ccccccccccchhhhcCHHHHHHhC--CCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccch
Confidence 000 000112238888888875 66777777999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Q 048562 373 SNEKLISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDAE 452 (464)
Q Consensus 373 ~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~ 452 (464)
.||+++++++|+|+.++.. .++.+++++|.++|+++|+++ +.++||+||+++++++++++.+||++..+++
T Consensus 391 ~na~~l~~~~G~g~~l~~~--------~~~~~~~~~l~~av~~vl~~~-~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~ 461 (480)
T 2vch_A 391 MNAVLLSEDIRAALRPRAG--------DDGLVRREEVARVVKGLMEGE-EGKGVRNKMKELKEAACRVLKDDGTSTKALS 461 (480)
T ss_dssp HHHHHHHHTTCCEECCCCC--------TTSCCCHHHHHHHHHHHHTST-HHHHHHHHHHHHHHHHHHHTSTTSHHHHHHH
T ss_pred HHHHHHHHHhCeEEEeecc--------cCCccCHHHHHHHHHHHhcCc-chHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 9999963599999999652 012589999999999999853 5569999999999999999999999999999
Q ss_pred HHHHHHHh
Q 048562 453 ALLQELKS 460 (464)
Q Consensus 453 ~l~~~~~~ 460 (464)
+|+++++.
T Consensus 462 ~~v~~~~~ 469 (480)
T 2vch_A 462 LVALKWKA 469 (480)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.6e-56 Score=462.67 Aligned_cols=430 Identities=25% Similarity=0.460 Sum_probs=310.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCC-CCeEEEEecCCCCCCC-----C
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSG-LPITIKTLHLPDDIEI-----P 78 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~-----~ 78 (464)
++++||+++|++++||++|++.||++|++|||+|||++++.+...+.+........| .+++++.++ +++.. .
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~--~~lp~~~~~~~ 83 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP--DGLTPMEGDGD 83 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC--CCCC-------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC--CCCCCcccccC
Confidence 456899999999999999999999999999999999999877655543210000011 268888876 23221 0
Q ss_pred CCCCcccHHHHH-hhhHHHHHHhhhh-------CCCCEEEeCCCchhhHHHHHHcCCCeEEEeccchHHHHHHHHHHh--
Q 048562 79 DTDMSATPRTDT-SMLQEPLKSLLVD-------SRPDCIVHDMFHHWSADVINSMNIPRIVFNGNCCFSRCILENVRK-- 148 (464)
Q Consensus 79 ~~~~~~~~~~~~-~~~~~~l~~~l~~-------~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~-- 148 (464)
.......+...+ ..+...+++++++ .+||+||+|.++.|+..+|+++|||+|.++++++.....+.+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 163 (482)
T 2pq6_A 84 VSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFV 163 (482)
T ss_dssp --CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHH
T ss_pred cchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHH
Confidence 011122233333 3455666666653 589999999999999999999999999999988776655432221
Q ss_pred ---hCCCCCCC--CC---CCc-eecCCCCCc--------cccC-----hh-----hhhhhccccEEEEcCccccChHHHH
Q 048562 149 ---YKPHEKVS--SD---YEP-FVVPGLPDK--------IELT-----AL-----SFRFEEKSFGIVVNSFYDLEPAYVE 201 (464)
Q Consensus 149 ---~~~~~~~~--~~---~~~-~~~p~~~~~--------~~~~-----~~-----~~~~~~~~~~~~~~~~~~l~~~~~~ 201 (464)
+.+..... .. ... ..+|+++.. .... .. ......+..++++|++.+|++++++
T Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~ 243 (482)
T 2pq6_A 164 ERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVIN 243 (482)
T ss_dssp HTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHH
T ss_pred hcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHH
Confidence 11111000 00 011 123333210 0000 00 0123456788999999999999988
Q ss_pred HHHhhhCCCCeEEeCccccc-ccCcchhhhcC--CCCCCCccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHh
Q 048562 202 YFKQDLGNDKAWFVGPVSLC-NRNIEDKAERG--QKTSIDEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLE 278 (464)
Q Consensus 202 ~~~~~~~~~~v~~vGp~~~~-~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~ 278 (464)
.++..+ +++++|||+... .........+. ...+..+.++.+||+..+++++|||||||+...+.+++.+++++|+
T Consensus 244 ~~~~~~--~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 321 (482)
T 2pq6_A 244 ALSSTI--PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLA 321 (482)
T ss_dssp HHHTTC--TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHhC--CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHH
Confidence 888776 789999998653 11100000000 0001134468899998878899999999998878888999999999
Q ss_pred hCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHc
Q 048562 279 ASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSA 358 (464)
Q Consensus 279 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~ 358 (464)
+.+++|||+++.. ... .. ...+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++|++++
T Consensus 322 ~~~~~~l~~~~~~------~~~-~~-~~~l~~~~~~~~---~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~ 390 (482)
T 2pq6_A 322 NCKKSFLWIIRPD------LVI-GG-SVIFSSEFTNEI---ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICA 390 (482)
T ss_dssp HTTCEEEEECCGG------GST-TT-GGGSCHHHHHHH---TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHH
T ss_pred hcCCcEEEEEcCC------ccc-cc-cccCcHhHHHhc---CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHc
Confidence 9999999999764 100 00 112777887766 679999999999999999999999999999999999999
Q ss_pred CCceeecccccccchhHHHHHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 048562 359 GVPMVTWPITAEQFSNEKLISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAK 438 (464)
Q Consensus 359 GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~ 438 (464)
|||||++|++.||+.||+++++++|+|+.++ . .+++++|.++|+++|+|++ +++||+||+++++.++
T Consensus 391 GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~-----------~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~~~~ 457 (482)
T 2pq6_A 391 GVPMLCWPFFADQPTDCRFICNEWEIGMEID-T-----------NVKREELAKLINEVIAGDK-GKKMKQKAMELKKKAE 457 (482)
T ss_dssp TCCEEECCCSTTHHHHHHHHHHTSCCEEECC-S-----------SCCHHHHHHHHHHHHTSHH-HHHHHHHHHHHHHHHH
T ss_pred CCCEEecCcccchHHHHHHHHHHhCEEEEEC-C-----------CCCHHHHHHHHHHHHcCCc-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999943799999997 4 6999999999999998753 6789999999999999
Q ss_pred HHHhcCCCcHHHHHHHHHHHHhcc
Q 048562 439 NAVEEGGSSFIDAEALLQELKSVS 462 (464)
Q Consensus 439 ~~~~~gg~~~~~~~~l~~~~~~~~ 462 (464)
+++++||++..++++|+++++..+
T Consensus 458 ~a~~~gGss~~~l~~~v~~~~~~~ 481 (482)
T 2pq6_A 458 ENTRPGGCSYMNLNKVIKDVLLKQ 481 (482)
T ss_dssp HHTSTTCHHHHHHHHHHHHTTCC-
T ss_pred HHHhcCCcHHHHHHHHHHHHHhcC
Confidence 999999999999999999987654
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=4.7e-56 Score=455.16 Aligned_cols=421 Identities=22% Similarity=0.356 Sum_probs=302.6
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCc--EEEEeCCcchhhhhhhhhhccCCCCCeEEEEecC--CCCCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAK--STIITSPKHALSFQKSINRNQQSGLPITIKTLHL--PDDIE 76 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~--Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~ 76 (464)
|++.++++||+++|+|++||++|++.||+.|++|||+ |||++++.....+.+.... ....+++++.++. |++.+
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~~glp~~~~ 78 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDISDGVPEGYV 78 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTCC
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCCCCCCCccc
Confidence 7777788999999999999999999999999999766 4778776443333221100 0013688877752 22211
Q ss_pred CCC--CCCcccHHHHH-hhhHHHHHHhhhh--CCCCEEEeCCCchhhHHHHHHcCCCeEEEeccchHHHHHHHHHHhh--
Q 048562 77 IPD--TDMSATPRTDT-SMLQEPLKSLLVD--SRPDCIVHDMFHHWSADVINSMNIPRIVFNGNCCFSRCILENVRKY-- 149 (464)
Q Consensus 77 ~~~--~~~~~~~~~~~-~~~~~~l~~~l~~--~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~-- 149 (464)
... ......+.... ..+.+.+.+++++ .+||+||+|.++.|+..+|+++|||+|.++++++.....+.+.+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 158 (456)
T 2c1x_A 79 FAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIRE 158 (456)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHH
T ss_pred ccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHh
Confidence 111 01111122221 1122333333333 5899999999988999999999999999999887766544322110
Q ss_pred --CCCCCCCCCCCc-eecCCCCCc--------cccC----h--hh----hhhhccccEEEEcCccccChHHHHHHHhhhC
Q 048562 150 --KPHEKVSSDYEP-FVVPGLPDK--------IELT----A--LS----FRFEEKSFGIVVNSFYDLEPAYVEYFKQDLG 208 (464)
Q Consensus 150 --~~~~~~~~~~~~-~~~p~~~~~--------~~~~----~--~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 208 (464)
............ ..+|+++.. +... . .. .....+..++++|++.++++++++.++..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~- 237 (456)
T 2c1x_A 159 KIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL- 237 (456)
T ss_dssp HHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS-
T ss_pred ccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC-
Confidence 100000001111 134544320 0000 0 00 123356788999999999999888888776
Q ss_pred CCCeEEeCcccccccCcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEE
Q 048562 209 NDKAWFVGPVSLCNRNIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVV 288 (464)
Q Consensus 209 ~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~ 288 (464)
+++++|||+....+.. ....+.++.+|++..+++++||||+||......+++.+++++|++.+++|||++
T Consensus 238 -~~~~~vGpl~~~~~~~---------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~ 307 (456)
T 2c1x_A 238 -KTYLNIGPFNLITPPP---------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSL 307 (456)
T ss_dssp -SCEEECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred -CCEEEecCcccCcccc---------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 6899999987542110 011235688999987788999999999998888899999999999999999999
Q ss_pred ccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccc
Q 048562 289 GKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPIT 368 (464)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~ 368 (464)
+.. ... .+|+++.++. ++|+++.+|+||.++|+|+++++||||||+||++|++++|||||++|++
T Consensus 308 ~~~-----------~~~-~l~~~~~~~~---~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~ 372 (456)
T 2c1x_A 308 RDK-----------ARV-HLPEGFLEKT---RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFF 372 (456)
T ss_dssp CGG-----------GGG-GSCTTHHHHH---TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred CCc-----------chh-hCCHHHHhhc---CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCCh
Confidence 865 111 2777877765 6789999999999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHhhh-cceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 048562 369 AEQFSNEKLISDVL-KIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSS 447 (464)
Q Consensus 369 ~DQ~~na~~v~~~~-G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~ 447 (464)
.||+.||++++ +. |+|+.++.. .+++++|.++|+++|+|++ +++||+||+++++.+++++.+|||+
T Consensus 373 ~dQ~~Na~~l~-~~~g~g~~l~~~-----------~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~~~~~a~~~gGsS 439 (456)
T 2c1x_A 373 GDQRLNGRMVE-DVLEIGVRIEGG-----------VFTKSGLMSCFDQILSQEK-GKKLRENLRALRETADRAVGPKGSS 439 (456)
T ss_dssp TTHHHHHHHHH-HTSCCEEECGGG-----------SCCHHHHHHHHHHHHHSHH-HHHHHHHHHHHHHHHHHHTSTTCHH
T ss_pred hhHHHHHHHHH-HHhCeEEEecCC-----------CcCHHHHHHHHHHHHCCCc-HHHHHHHHHHHHHHHHHhhhcCCcH
Confidence 99999999995 87 999999765 7999999999999999754 7789999999999999999999999
Q ss_pred HHHHHHHHHHHHhcc
Q 048562 448 FIDAEALLQELKSVS 462 (464)
Q Consensus 448 ~~~~~~l~~~~~~~~ 462 (464)
..++++|++++.+.+
T Consensus 440 ~~~l~~~v~~~~~~~ 454 (456)
T 2c1x_A 440 TENFITLVDLVSKPK 454 (456)
T ss_dssp HHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999997644
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=4.3e-55 Score=449.11 Aligned_cols=420 Identities=27% Similarity=0.410 Sum_probs=310.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcchh-hhhhhhhhccCCCCCeEEEEecCCCCCCC----C
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKHAL-SFQKSINRNQQSGLPITIKTLHLPDDIEI----P 78 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~ 78 (464)
+++||+++|+|++||++|++.||+.|++| ||+|||++++.+.+ .+.+...+....+.++.|+.+|..+ +.- .
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~-~~~~~~~~ 86 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVE-PPPQELLK 86 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCC-CCCGGGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCC-CCcccccC
Confidence 56899999999999999999999999999 99999999886531 1111111100113478888887431 110 1
Q ss_pred CCCCcccHHHHHhhhHHHHHHhhhh---CCCCEEEeCCCchhhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCC
Q 048562 79 DTDMSATPRTDTSMLQEPLKSLLVD---SRPDCIVHDMFHHWSADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKV 155 (464)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (464)
..... +...+..+.+.+++++++ .+||+||+|.++.|+..+|+++|||++.++++++.....+.+.+.......+
T Consensus 87 ~~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (463)
T 2acv_A 87 SPEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVF 164 (463)
T ss_dssp SHHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCC
T ss_pred CccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCCC
Confidence 10111 344445566778888877 7899999999888999999999999999999988776666554432210011
Q ss_pred CCCCC---ceecCCC-CCcc--ccCh-------------hhhhhhccccEEEEcCccccChHHHHHHHhhhC-CCCeEEe
Q 048562 156 SSDYE---PFVVPGL-PDKI--ELTA-------------LSFRFEEKSFGIVVNSFYDLEPAYVEYFKQDLG-NDKAWFV 215 (464)
Q Consensus 156 ~~~~~---~~~~p~~-~~~~--~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~v~~v 215 (464)
..... +..+|++ +... .+.. ..+....+..++++|+|.++++...+.+..... .+++++|
T Consensus 165 ~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~~v 244 (463)
T 2acv_A 165 DDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAV 244 (463)
T ss_dssp CCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEEC
T ss_pred CCccccCceeECCCCCCCCChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCCcEEEe
Confidence 11111 3455665 3211 0110 012335677889999999999988776655320 2689999
Q ss_pred CcccccccCcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCC-CCCHHhHHHHHHHHhhCCCceEEEEccCCCC
Q 048562 216 GPVSLCNRNIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLA-RLSPEQLLEIAYGLEASNHSFIWVVGKIFQS 294 (464)
Q Consensus 216 Gp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~-~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~ 294 (464)
||+.......... ..+..++++.+|++..+++++|||||||+. ..+.+++.+++++|++.+++|||+++..
T Consensus 245 Gpl~~~~~~~~~~-----~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~--- 316 (463)
T 2acv_A 245 GPLLDLKGQPNPK-----LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE--- 316 (463)
T ss_dssp CCCCCSSCCCBTT-----BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC---
T ss_pred CCCcccccccccc-----cccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC---
Confidence 9987542100000 000134678899998878899999999999 7788889999999999999999999753
Q ss_pred CCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchh
Q 048562 295 PGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSN 374 (464)
Q Consensus 295 ~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~n 374 (464)
. ..+|+++.++.. .++|+++.+|+||.++|.|+++++||||||+||++|++++|||||++|++.||+.|
T Consensus 317 -------~---~~l~~~~~~~~~-~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~N 385 (463)
T 2acv_A 317 -------K---KVFPEGFLEWME-LEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLN 385 (463)
T ss_dssp -------G---GGSCTTHHHHHH-HHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHH
T ss_pred -------c---ccCChhHHHhhc-cCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHH
Confidence 0 126777766540 02477888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcceEEe-ccccccCCCCCCCC--ccChHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Q 048562 375 EKLISDVLKIGVKV-GSVNWVSWSTEPSA--AVGRDKVEVAVKRLMGT-GEEAAEMRRRAGELGEKAKNAVEEGGSSFID 450 (464)
Q Consensus 375 a~~v~~~~G~G~~l-~~~~~~~~~~~~~~--~~~~~~l~~ai~~il~~-~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~ 450 (464)
|+++++++|+|+.+ +.. +.. .+++++|.++|+++|++ + +||+||+++++.+++++++||++..+
T Consensus 386 a~~lv~~~g~g~~l~~~~--------~~~~~~~~~~~l~~ai~~ll~~~~----~~r~~a~~l~~~~~~a~~~gGss~~~ 453 (463)
T 2acv_A 386 AFRLVKEWGVGLGLRVDY--------RKGSDVVAAEEIEKGLKDLMDKDS----IVHKKVQEMKEMSRNAVVDGGSSLIS 453 (463)
T ss_dssp HHHHHHTSCCEEESCSSC--------CTTCCCCCHHHHHHHHHHHTCTTC----THHHHHHHHHHHHHHHTSTTSHHHHH
T ss_pred HHHHHHHcCeEEEEeccc--------CCCCccccHHHHHHHHHHHHhccH----HHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 99942599999999 311 002 48999999999999973 4 89999999999999999999999999
Q ss_pred HHHHHHHHH
Q 048562 451 AEALLQELK 459 (464)
Q Consensus 451 ~~~l~~~~~ 459 (464)
+++|+++++
T Consensus 454 l~~~v~~~~ 462 (463)
T 2acv_A 454 VGKLIDDIT 462 (463)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999999985
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1e-42 Score=354.08 Aligned_cols=381 Identities=20% Similarity=0.244 Sum_probs=263.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecC--CCCCCC-C--C
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHL--PDDIEI-P--D 79 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~-~--~ 79 (464)
|+|+||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+... ++.++.++. +++... . .
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCCSCCTTCTTCCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCccccccccchhhcc
Confidence 6789999999999999999999999999999999999999887776665 567776652 111110 0 0
Q ss_pred CCC---cccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCCC
Q 048562 80 TDM---SATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKVS 156 (464)
Q Consensus 80 ~~~---~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (464)
... ...+......+.+.+.+++++.+||+||+|.+..++..+|+.+|||++.+++.+............... ...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~-~~~~ 159 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQD-PTAD 159 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSC-CCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccccc-cccc
Confidence 010 111122223456778888888999999999887789999999999999998765311100000000000 0000
Q ss_pred CCC---Cceec---CCCCC---ccccChhhh--------------hhhccccEEEEcCccccChHHHHHHHhhhCCCCeE
Q 048562 157 SDY---EPFVV---PGLPD---KIELTALSF--------------RFEEKSFGIVVNSFYDLEPAYVEYFKQDLGNDKAW 213 (464)
Q Consensus 157 ~~~---~~~~~---p~~~~---~~~~~~~~~--------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~ 213 (464)
... .+... ..+.. ........+ ........++.++...++++. ..+ +++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~-----~~~-~~~~~ 233 (424)
T 2iya_A 160 RGEEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG-----DTV-GDNYT 233 (424)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG-----GGC-CTTEE
T ss_pred cccccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc-----cCC-CCCEE
Confidence 000 00000 00000 000000000 011134567777777776532 345 57899
Q ss_pred EeCcccccccCcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCC
Q 048562 214 FVGPVSLCNRNIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQ 293 (464)
Q Consensus 214 ~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~ 293 (464)
+|||+.... .+..+|++..+++++|||++||......+.+..+++++++.+.+++|.++..
T Consensus 234 ~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~-- 294 (424)
T 2iya_A 234 FVGPTYGDR-----------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRF-- 294 (424)
T ss_dssp ECCCCCCCC-----------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTT--
T ss_pred EeCCCCCCc-----------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCc--
Confidence 999975321 1123577655567899999999986667889999999999999999998764
Q ss_pred CCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccch
Q 048562 294 SPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFS 373 (464)
Q Consensus 294 ~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~ 373 (464)
..... +. +.++|+++.+|+||.++|+|+++ ||||||+||++|++++|||+|++|...||+.
T Consensus 295 --------~~~~~-~~--------~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~ 355 (424)
T 2iya_A 295 --------VDPAD-LG--------EVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTM 355 (424)
T ss_dssp --------SCGGG-GC--------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHH
T ss_pred --------CChHH-hc--------cCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHH
Confidence 11111 11 11679999999999999999987 9999999999999999999999999999999
Q ss_pred hHHHHHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Q 048562 374 NEKLISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDAEA 453 (464)
Q Consensus 374 na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~ 453 (464)
||+++ ++.|+|+.++.. .+++++|.++|+++++|+ +++++++++++++++ .+|+ ..+.+
T Consensus 356 na~~l-~~~g~g~~~~~~-----------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~---~~~~--~~~~~ 414 (424)
T 2iya_A 356 NAERI-VELGLGRHIPRD-----------QVTAEKLREAVLAVASDP----GVAERLAAVRQEIRE---AGGA--RAAAD 414 (424)
T ss_dssp HHHHH-HHTTSEEECCGG-----------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT---SCHH--HHHHH
T ss_pred HHHHH-HHCCCEEEcCcC-----------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh---cCcH--HHHHH
Confidence 99999 599999999765 789999999999999987 899999999999883 4443 33466
Q ss_pred HHHHHHh
Q 048562 454 LLQELKS 460 (464)
Q Consensus 454 l~~~~~~ 460 (464)
.++++.+
T Consensus 415 ~i~~~~~ 421 (424)
T 2iya_A 415 ILEGILA 421 (424)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666554
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.2e-42 Score=350.16 Aligned_cols=357 Identities=17% Similarity=0.215 Sum_probs=231.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCC---------C
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDI---------E 76 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------~ 76 (464)
+.|||||+++|+.||++|+++||++|++|||+|||++++.+.+.... ++.+..+...... .
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAEA----------GLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHTT----------TCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHhc----------CCeeEecCCchhHhhhccccccc
Confidence 56899999999999999999999999999999999999877654332 3455554311111 0
Q ss_pred -CC---CCCCccc-----HHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEEeccchHHHHHHHHHH
Q 048562 77 -IP---DTDMSAT-----PRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVFNGNCCFSRCILENVR 147 (464)
Q Consensus 77 -~~---~~~~~~~-----~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 147 (464)
.. ....... +..........+.+.+++.+||+||+|.++.++..+|+.+|||++.+...+...........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~~ 170 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGALI 170 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHHH
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhHH
Confidence 00 0001111 11112234556777888899999999998889999999999999987654322211111000
Q ss_pred hhCCCCCCCCCCCceecCCCCCccccChhhhhhhccccEEEEcCccccChHHHHHHH-hhhCCCCeEEeCcccccccCcc
Q 048562 148 KYKPHEKVSSDYEPFVVPGLPDKIELTALSFRFEEKSFGIVVNSFYDLEPAYVEYFK-QDLGNDKAWFVGPVSLCNRNIE 226 (464)
Q Consensus 148 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~v~~vGp~~~~~~~~~ 226 (464)
..... ....--++.. .......... .+....... .....+..+.+++..
T Consensus 171 ~~~l~-------~~~~~~~~~~------------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~------- 220 (400)
T 4amg_A 171 RRAMS-------KDYERHGVTG------------EPTGSVRLTT----TPPSVEALLPEDRRSPGAWPMRYVP------- 220 (400)
T ss_dssp HHHTH-------HHHHHTTCCC------------CCSCEEEEEC----CCHHHHHTSCGGGCCTTCEECCCCC-------
T ss_pred HHHHH-------HHHHHhCCCc------------ccccchhhcc----cCchhhccCcccccCCcccCccccc-------
Confidence 00000 0000000000 0000001100 111111000 000011112221111
Q ss_pred hhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCCC--HHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCccc
Q 048562 227 DKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARLS--PEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIE 304 (464)
Q Consensus 227 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~--~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~ 304 (464)
......+.+|++..+++++||||+||+.... .+.+..+++++++.+..+||..++. .. +.
T Consensus 221 ---------~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~------~~--~~- 282 (400)
T 4amg_A 221 ---------YNGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGG------DL--AL- 282 (400)
T ss_dssp ---------CCCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTT------CC--CC-
T ss_pred ---------ccccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCc------cc--cc-
Confidence 1123455678888888999999999987633 4678889999999999999998765 10 01
Q ss_pred ccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcc
Q 048562 305 ENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKI 384 (464)
Q Consensus 305 ~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~ 384 (464)
+. ..++|+++.+|+||.++|+|+++ ||||||+||++|++++|||+|++|++.||+.||+++ +++|+
T Consensus 283 ---~~--------~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v-~~~G~ 348 (400)
T 4amg_A 283 ---LG--------ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVL-TGLGI 348 (400)
T ss_dssp ---CC--------CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHH-HHHTS
T ss_pred ---cc--------cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHH-HHCCC
Confidence 11 11779999999999999999887 999999999999999999999999999999999999 59999
Q ss_pred eEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 048562 385 GVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDAEALLQEL 458 (464)
Q Consensus 385 G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~~ 458 (464)
|+.++.. ..++ ++|+++|+|+ +||+||+++++++++ ..|. +.+++.|++|
T Consensus 349 g~~l~~~-----------~~~~----~al~~lL~d~----~~r~~a~~l~~~~~~---~~~~--~~~a~~le~l 398 (400)
T 4amg_A 349 GFDAEAG-----------SLGA----EQCRRLLDDA----GLREAALRVRQEMSE---MPPP--AETAAXLVAL 398 (400)
T ss_dssp EEECCTT-----------TCSH----HHHHHHHHCH----HHHHHHHHHHHHHHT---SCCH--HHHHHHHHHH
T ss_pred EEEcCCC-----------CchH----HHHHHHHcCH----HHHHHHHHHHHHHHc---CCCH--HHHHHHHHHh
Confidence 9999765 5554 4777899988 899999999999994 4443 4456677766
No 8
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=4.5e-39 Score=325.93 Aligned_cols=366 Identities=14% Similarity=0.156 Sum_probs=253.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCC-----CC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEI-----PD 79 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~ 79 (464)
.+|+||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+... ++.+..++.+..... ..
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 88 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSEIIDADAAEVFGS 88 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCSTTTCCHHHHHHS
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEeccccccccccchhhcc
Confidence 4689999999999999999999999999999999999998887777665 677777653211100 00
Q ss_pred CCCc---cc-HHHHHhhhHHHHHHhhhhCCCCEEEeC-CCchhhHHHHHHcCCCeEEEeccchHHHHHH---HHHHhhCC
Q 048562 80 TDMS---AT-PRTDTSMLQEPLKSLLVDSRPDCIVHD-MFHHWSADVINSMNIPRIVFNGNCCFSRCIL---ENVRKYKP 151 (464)
Q Consensus 80 ~~~~---~~-~~~~~~~~~~~l~~~l~~~~pD~Vi~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~---~~~~~~~~ 151 (464)
.... .. +..........+.+.+++.+||+||+| ....++..+|+.+|||++.+.+......... .......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~- 167 (415)
T 3rsc_A 89 DDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTLAG- 167 (415)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCHHHHHHHHHT-
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCccccccccccccc-
Confidence 0111 11 233333456778888999999999999 6677888899999999999874432100000 0000000
Q ss_pred CCCCCCCCCceecCCCCCccccChhhh--------------hhhccc-cEEEEcCccccChHHHHHHHhhhCCCCeEEeC
Q 048562 152 HEKVSSDYEPFVVPGLPDKIELTALSF--------------RFEEKS-FGIVVNSFYDLEPAYVEYFKQDLGNDKAWFVG 216 (464)
Q Consensus 152 ~~~~~~~~~~~~~p~~~~~~~~~~~~~--------------~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vG 216 (464)
...+.........+ ...... +..+... ++.+++....+ +.++.++|
T Consensus 168 -------------~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~-~~~~~~vG 228 (415)
T 3rsc_A 168 -------------TIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFV-----PKAFQIAGDTF-DDRFVFVG 228 (415)
T ss_dssp -------------CCCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESS-----CTTTSTTGGGC-CTTEEECC
T ss_pred -------------cCChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEc-----CcccCCCcccC-CCceEEeC
Confidence 00000000000000 001111 2223222 22222333445 56789999
Q ss_pred cccccccCcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCC
Q 048562 217 PVSLCNRNIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPG 296 (464)
Q Consensus 217 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~ 296 (464)
|..... .+..+|....+++++||+++||......+.+..+++++.+.+.+++|.++..
T Consensus 229 p~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~----- 286 (415)
T 3rsc_A 229 PCFDDR-----------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQ----- 286 (415)
T ss_dssp CCCCCC-----------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTT-----
T ss_pred CCCCCc-----------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCC-----
Confidence 865321 1233455545567899999999987777889999999999999999998764
Q ss_pred CCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhHH
Q 048562 297 TRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNEK 376 (464)
Q Consensus 297 ~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~ 376 (464)
..... +. +.++|+++.+|+|+.++|+++++ ||||||.||++|++++|+|+|++|...||+.||+
T Consensus 287 -----~~~~~-l~--------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~ 350 (415)
T 3rsc_A 287 -----VDPAA-LG--------DLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMAR 350 (415)
T ss_dssp -----SCGGG-GC--------CCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHH
T ss_pred -----CChHH-hc--------CCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHH
Confidence 11110 11 12679999999999999999887 9999999999999999999999999999999999
Q ss_pred HHHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Q 048562 377 LISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDAEALLQ 456 (464)
Q Consensus 377 ~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~ 456 (464)
++ ++.|+|+.+... .++++.|.++|.++++|+ +++++++++++.+.+ .+| ...+.+.++
T Consensus 351 ~l-~~~g~g~~~~~~-----------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~---~~~--~~~~~~~i~ 409 (415)
T 3rsc_A 351 RV-DQLGLGAVLPGE-----------KADGDTLLAAVGAVAADP----ALLARVEAMRGHVRR---AGG--AARAADAVE 409 (415)
T ss_dssp HH-HHHTCEEECCGG-----------GCCHHHHHHHHHHHHTCH----HHHHHHHHHHHHHHH---SCH--HHHHHHHHH
T ss_pred HH-HHcCCEEEcccC-----------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh---cCH--HHHHHHHHH
Confidence 99 599999999876 789999999999999997 899999999999883 333 233455555
Q ss_pred HH
Q 048562 457 EL 458 (464)
Q Consensus 457 ~~ 458 (464)
++
T Consensus 410 ~~ 411 (415)
T 3rsc_A 410 AY 411 (415)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 9
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=9.4e-39 Score=323.98 Aligned_cols=366 Identities=16% Similarity=0.140 Sum_probs=243.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCC--CCCCCCCCCccc
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPD--DIEIPDTDMSAT 85 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~ 85 (464)
|||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+... ++.++.++... .++.........
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARAPIQRAKPLTAED 71 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC-------CCSCCCHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHHHhhcccccchHH
Confidence 5899999999999999999999999999999999999876655554 56777765321 111000011001
Q ss_pred HHHHHhh-hHHHHHHhhh-hCCCCEEEeCC-Cchh--hHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCCCCCCC
Q 048562 86 PRTDTSM-LQEPLKSLLV-DSRPDCIVHDM-FHHW--SADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKVSSDYE 160 (464)
Q Consensus 86 ~~~~~~~-~~~~l~~~l~-~~~pD~Vi~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (464)
+...+.. ....++++++ ..+||+||+|. +..+ +..+|+.+|||+|.+.+++...... .......
T Consensus 72 ~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~-----------~~p~~~~ 140 (415)
T 1iir_A 72 VRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSP-----------YYPPPPL 140 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS-----------SSCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCc-----------ccCCccC
Confidence 1111111 1233444443 57999999998 5567 8899999999999998775332100 0000000
Q ss_pred ceecCC--CCCcccc--Ch----h----hhhhh----------------ccccEEEEcCccccChHHHHHHHhhhCCCCe
Q 048562 161 PFVVPG--LPDKIEL--TA----L----SFRFE----------------EKSFGIVVNSFYDLEPAYVEYFKQDLGNDKA 212 (464)
Q Consensus 161 ~~~~p~--~~~~~~~--~~----~----~~~~~----------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v 212 (464)
+..+|+ ..+.... .. . .+... ... .++.++...+++. .... .++
T Consensus 141 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~----~~~~---~~~ 212 (415)
T 1iir_A 141 GEPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPL----QPTD---LDA 212 (415)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCC----CCCS---SCC
T ss_pred CccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCC----Cccc---CCe
Confidence 000000 0000000 00 0 00000 111 3455555555431 0011 168
Q ss_pred EEeCcccccccCcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCC
Q 048562 213 WFVGPVSLCNRNIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIF 292 (464)
Q Consensus 213 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~ 292 (464)
++|||+..... +..++++.+|++.. +++|||++||+. ...+.+..+++++++.+.+++|+++..
T Consensus 213 ~~vG~~~~~~~------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~- 276 (415)
T 1iir_A 213 VQTGAWILPDE------------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWA- 276 (415)
T ss_dssp EECCCCCCCCC------------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCT-
T ss_pred EeeCCCccCcc------------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCC-
Confidence 89998764321 11456788898764 469999999997 567788889999999999999998765
Q ss_pred CCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccc
Q 048562 293 QSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQF 372 (464)
Q Consensus 293 ~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~ 372 (464)
. .. +. ..++|+++.+|+||.++|+++++ ||||||+||++|++++|||+|++|...||.
T Consensus 277 -----~---~~----~~--------~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~ 334 (415)
T 1iir_A 277 -----D---LV----LP--------DDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQP 334 (415)
T ss_dssp -----T---CC----CS--------SCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred -----c---cc----cc--------CCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccH
Confidence 1 01 10 01568999999999999966666 999999999999999999999999999999
Q ss_pred hhHHHHHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Q 048562 373 SNEKLISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDAE 452 (464)
Q Consensus 373 ~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~ 452 (464)
.||+++ ++.|+|+.++.. .+++++|.++|+++ +|+ +|+++++++++++++ .+| ...+.
T Consensus 335 ~na~~l-~~~g~g~~~~~~-----------~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~~---~~~--~~~~~ 392 (415)
T 1iir_A 335 YYAGRV-AELGVGVAHDGP-----------IPTFDSLSAALATA-LTP----ETHARATAVAGTIRT---DGA--AVAAR 392 (415)
T ss_dssp HHHHHH-HHHTSEEECSSS-----------SCCHHHHHHHHHHH-TSH----HHHHHHHHHHHHSCS---CHH--HHHHH
T ss_pred HHHHHH-HHCCCcccCCcC-----------CCCHHHHHHHHHHH-cCH----HHHHHHHHHHHHHhh---cCh--HHHHH
Confidence 999999 699999999765 68999999999999 876 899999999998762 222 34456
Q ss_pred HHHHHHHhc
Q 048562 453 ALLQELKSV 461 (464)
Q Consensus 453 ~l~~~~~~~ 461 (464)
+.++++.+.
T Consensus 393 ~~i~~~~~~ 401 (415)
T 1iir_A 393 LLLDAVSRE 401 (415)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 777776554
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1e-38 Score=323.81 Aligned_cols=364 Identities=14% Similarity=0.101 Sum_probs=246.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCC-C-CCC-CCCCCcc
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPD-D-IEI-PDTDMSA 84 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~-~~~-~~~~~~~ 84 (464)
|||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+... ++.++.++... + ... .......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHMMLQEGMPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHHHHhhccccchhH
Confidence 5899999999999999999999999999999999998877666665 56677765321 1 110 0001100
Q ss_pred cHHHHHhhhHHHHHHhhh--hCCCCEEEeCCC-chh--hHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCCCCCC
Q 048562 85 TPRTDTSMLQEPLKSLLV--DSRPDCIVHDMF-HHW--SADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKVSSDY 159 (464)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~--~~~pD~Vi~D~~-~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (464)
.+..........+.+.++ ..+||+||+|.+ ..+ +..+|+.+|||++.+.+++.+... .... +.
T Consensus 72 ~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~-----------~~~p-~~ 139 (416)
T 1rrv_A 72 EEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS-----------PHLP-PA 139 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSC-CC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-----------cccC-CC
Confidence 111111112233333333 578999999974 446 788999999999998776533210 0000 00
Q ss_pred Cceec-CC-CCCccc------cChh-------hh-------------hhhccccEEEEcCccccChHHHHHHHhhhCCCC
Q 048562 160 EPFVV-PG-LPDKIE------LTAL-------SF-------------RFEEKSFGIVVNSFYDLEPAYVEYFKQDLGNDK 211 (464)
Q Consensus 160 ~~~~~-p~-~~~~~~------~~~~-------~~-------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 211 (464)
.+... ++ ..+... ..++ .+ ...... .++.++...++++. . ..+
T Consensus 140 ~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-----~---~~~ 210 (416)
T 1rrv_A 140 YDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQ-----P---DVD 210 (416)
T ss_dssp BCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCCC-----S---SCC
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCCC-----C---CCC
Confidence 00000 11 100000 0000 00 001111 35566666555321 1 127
Q ss_pred eEEeCcccccccCcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCC-CCHHhHHHHHHHHhhCCCceEEEEcc
Q 048562 212 AWFVGPVSLCNRNIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLAR-LSPEQLLEIAYGLEASNHSFIWVVGK 290 (464)
Q Consensus 212 v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~v~~~~~ 290 (464)
+++|||+..... +..++++.+|++.. +++|||++||... ...+.+..+++++++.+.+++|+++.
T Consensus 211 ~~~vG~~~~~~~------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~ 276 (416)
T 1rrv_A 211 AVQTGAWLLSDE------------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGW 276 (416)
T ss_dssp CEECCCCCCCCC------------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred eeeECCCccCcc------------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 889998765321 11456778898764 4699999999975 34667888999999999999999876
Q ss_pred CCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccc
Q 048562 291 IFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAE 370 (464)
Q Consensus 291 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~D 370 (464)
. . . . +. ..++|+.+.+|+||.++|+++++ ||||||+||++|++++|||+|++|...|
T Consensus 277 ~------~----~-~--~~--------~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~d 333 (416)
T 1rrv_A 277 T------E----L-V--LP--------DDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTD 333 (416)
T ss_dssp T------T----C-C--CS--------CCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBT
T ss_pred c------c----c-c--cc--------CCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCC
Confidence 5 1 0 0 10 11679999999999999977766 9999999999999999999999999999
Q ss_pred cchhHHHHHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Q 048562 371 QFSNEKLISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFID 450 (464)
Q Consensus 371 Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~ 450 (464)
|+.||+++ ++.|+|+.++.. .+++++|.++|+++ +|+ +|+++++++++++++ .+| . .
T Consensus 334 Q~~na~~l-~~~g~g~~~~~~-----------~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~~---~~~-~--~ 390 (416)
T 1rrv_A 334 QPYFAGRV-AALGIGVAHDGP-----------TPTFESLSAALTTV-LAP----ETRARAEAVAGMVLT---DGA-A--A 390 (416)
T ss_dssp HHHHHHHH-HHHTSEEECSSS-----------CCCHHHHHHHHHHH-TSH----HHHHHHHHHTTTCCC---CHH-H--H
T ss_pred cHHHHHHH-HHCCCccCCCCC-----------CCCHHHHHHHHHHh-hCH----HHHHHHHHHHHHHhh---cCc-H--H
Confidence 99999999 599999999765 68999999999999 887 899999999988772 333 2 4
Q ss_pred HHHHH-HHHHhc
Q 048562 451 AEALL-QELKSV 461 (464)
Q Consensus 451 ~~~l~-~~~~~~ 461 (464)
+.+.+ +++.+.
T Consensus 391 ~~~~i~e~~~~~ 402 (416)
T 1rrv_A 391 AADLVLAAVGRE 402 (416)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHhcc
Confidence 45555 776554
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=5.3e-38 Score=316.22 Aligned_cols=368 Identities=17% Similarity=0.220 Sum_probs=251.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCC-CC----CC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDI-EI----PD 79 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~----~~ 79 (464)
|+|+||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+... ++.+..++.+... .. ..
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 72 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTFHVPEVVKQ 72 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTSSSSSSSCC
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEecccccccccccccccc
Confidence 5678999999999999999999999999999999999998777766654 5677766532110 00 00
Q ss_pred CCCcc---c-HHHHHhhhHHHHHHhhhhCCCCEEEeC-CCchhhHHHHHHcCCCeEEEeccchHHHHHHH--HH-HhhCC
Q 048562 80 TDMSA---T-PRTDTSMLQEPLKSLLVDSRPDCIVHD-MFHHWSADVINSMNIPRIVFNGNCCFSRCILE--NV-RKYKP 151 (464)
Q Consensus 80 ~~~~~---~-~~~~~~~~~~~l~~~l~~~~pD~Vi~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~--~~-~~~~~ 151 (464)
..... . +..........+.+.+++.+||+||+| .+..++..+|+.+|||+|.+.+.......... .. ....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~- 151 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNG- 151 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHHHT-
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccccccccccccc-
Confidence 00011 1 222223345778888889999999999 67778889999999999998643221000000 00 0000
Q ss_pred CCCCCCCCCcee-------------cCCCCCccccChhhhhhhccc-cEEEEcCccccChHHHHHHHhhhCCCCeEEeCc
Q 048562 152 HEKVSSDYEPFV-------------VPGLPDKIELTALSFRFEEKS-FGIVVNSFYDLEPAYVEYFKQDLGNDKAWFVGP 217 (464)
Q Consensus 152 ~~~~~~~~~~~~-------------~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vGp 217 (464)
...+.. --+++.. .. ...... +..+... ++.++.....+ +.++.++||
T Consensus 152 ------~~~~~~~~~~~~~~~~~~~~~g~~~~----~~--~~~~~~~~~~l~~~-----~~~~~~~~~~~-~~~~~~vGp 213 (402)
T 3ia7_A 152 ------QRHPADVEAVHSVLVDLLGKYGVDTP----VK--EYWDEIEGLTIVFL-----PKSFQPFAETF-DERFAFVGP 213 (402)
T ss_dssp ------CCCGGGSHHHHHHHHHHHHTTTCCSC----HH--HHHTCCCSCEEESS-----CGGGSTTGGGC-CTTEEECCC
T ss_pred ------ccChhhHHHHHHHHHHHHHHcCCCCC----hh--hhhcCCCCeEEEEc-----ChHhCCccccC-CCCeEEeCC
Confidence 000000 0000000 00 000101 2222222 22222333445 567999998
Q ss_pred ccccccCcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCC
Q 048562 218 VSLCNRNIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGT 297 (464)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~ 297 (464)
..... .+..+|+...+++++||+++||......+.+..+++++.+.+.+++|.++..
T Consensus 214 ~~~~~-----------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~------ 270 (402)
T 3ia7_A 214 TLTGR-----------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGF------ 270 (402)
T ss_dssp CCCC---------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTT------
T ss_pred CCCCc-----------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCc------
Confidence 65321 1223455445567899999999988777789999999999999999988764
Q ss_pred CcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeeccc-ccccchhHH
Q 048562 298 RKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPI-TAEQFSNEK 376 (464)
Q Consensus 298 ~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~-~~DQ~~na~ 376 (464)
..... +. +.++|+.+.+|+|+.++|+++++ ||||||.||+.|++++|+|+|++|. ..||..|+.
T Consensus 271 ----~~~~~-~~--------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~ 335 (402)
T 3ia7_A 271 ----LDPAV-LG--------PLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAE 335 (402)
T ss_dssp ----SCGGG-GC--------SCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHH
T ss_pred ----CChhh-hC--------CCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHH
Confidence 11110 11 12779999999999999999887 9999999999999999999999999 999999999
Q ss_pred HHHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Q 048562 377 LISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDAEALLQ 456 (464)
Q Consensus 377 ~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~ 456 (464)
++ ++.|+|..+... .++++.|.++|.++|+|+ +++++++++++.+.+ . ++ ...+.+.++
T Consensus 336 ~~-~~~g~g~~~~~~-----------~~~~~~l~~~~~~ll~~~----~~~~~~~~~~~~~~~---~-~~-~~~~~~~i~ 394 (402)
T 3ia7_A 336 RV-IELGLGSVLRPD-----------QLEPASIREAVERLAADS----AVRERVRRMQRDILS---S-GG-PARAADEVE 394 (402)
T ss_dssp HH-HHTTSEEECCGG-----------GCSHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT---S-CH-HHHHHHHHH
T ss_pred HH-HHcCCEEEccCC-----------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHhh---C-Ch-HHHHHHHHH
Confidence 99 599999999876 789999999999999997 899999999998873 3 33 333455555
Q ss_pred HHH
Q 048562 457 ELK 459 (464)
Q Consensus 457 ~~~ 459 (464)
++.
T Consensus 395 ~~~ 397 (402)
T 3ia7_A 395 AYL 397 (402)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=7e-38 Score=316.44 Aligned_cols=360 Identities=15% Similarity=0.113 Sum_probs=246.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCC-CC----CCCCCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDD-IE----IPDTDM 82 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~----~~~~~~ 82 (464)
|||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+... ++.+..++.... .. ......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHHHhccccCCHHHH
Confidence 5899999999999999999999999999999999999887777765 566677652211 11 111122
Q ss_pred cccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhh---HHHHHHcCCCeEEEeccchHHHH-------------HHHHH
Q 048562 83 SATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWS---ADVINSMNIPRIVFNGNCCFSRC-------------ILENV 146 (464)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~---~~~A~~~giP~v~~~~~~~~~~~-------------~~~~~ 146 (464)
...+..........+.+.+ .+||+||+|.....+ ..+|+.+|||++.+..++..... .+..+
T Consensus 72 ~~~~~~~~~~~~~~l~~~~--~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 149 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAI--EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGADRLF 149 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHH--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh--cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHHHHHHh
Confidence 2233333333444444444 379999999765533 78899999999988876542000 00000
Q ss_pred Hh-hCCCCCCCCCCCceecCCCCCccccChhhhhhhccccEEEEcCccccChHHHHHHHhhhCCCCeEEeCcccccccCc
Q 048562 147 RK-YKPHEKVSSDYEPFVVPGLPDKIELTALSFRFEEKSFGIVVNSFYDLEPAYVEYFKQDLGNDKAWFVGPVSLCNRNI 225 (464)
Q Consensus 147 ~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vGp~~~~~~~~ 225 (464)
.. .+. ...--+++...... .... ....+.+....+.+. ..+ ++++.++|++..+..
T Consensus 150 ~~~~~~---------~~~~lgl~~~~~~~----~~~~-~~~~l~~~~~~l~p~------~~~-~~~~~~~G~~~~~~~-- 206 (404)
T 3h4t_A 150 GDAVNS---------HRASIGLPPVEHLY----DYGY-TDQPWLAADPVLSPL------RPT-DLGTVQTGAWILPDQ-- 206 (404)
T ss_dssp HHHHHH---------HHHHTTCCCCCCHH----HHHH-CSSCEECSCTTTSCC------CTT-CCSCCBCCCCCCCCC--
T ss_pred HHHHHH---------HHHHcCCCCCcchh----hccc-cCCeEEeeCcceeCC------CCC-CCCeEEeCccccCCC--
Confidence 00 000 00000111100000 0000 111122333333221 123 457788887654321
Q ss_pred chhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccc
Q 048562 226 EDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEE 305 (464)
Q Consensus 226 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 305 (464)
..+++++.+|++. ++++|||++||+.. ..+.+..+++++++.+.++||+++.. . ..
T Consensus 207 ----------~~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~------~-----~~ 262 (404)
T 3h4t_A 207 ----------RPLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWA------G-----LG 262 (404)
T ss_dssp ----------CCCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTT------T-----CC
T ss_pred ----------CCCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCc------c-----cc
Confidence 1256788889875 35799999999987 67789999999999999999998765 1 00
Q ss_pred cCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcce
Q 048562 306 NWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIG 385 (464)
Q Consensus 306 ~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G 385 (464)
. +. .++|+++.+|+||.++|+++++ ||||||.||+.|++++|+|+|++|+..||+.||+++ ++.|+|
T Consensus 263 ~-~~---------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~-~~~G~g 329 (404)
T 3h4t_A 263 R-ID---------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRV-ADLGVG 329 (404)
T ss_dssp C-SS---------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHHTSE
T ss_pred c-cc---------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHH-HHCCCE
Confidence 0 11 1679999999999999988777 999999999999999999999999999999999999 599999
Q ss_pred EEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q 048562 386 VKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDAEALLQELKS 460 (464)
Q Consensus 386 ~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~~~~ 460 (464)
+.++.. .+++++|.++|+++++ + +|+++++++++.++ ..| ...+.+.++++.+
T Consensus 330 ~~l~~~-----------~~~~~~l~~ai~~ll~-~----~~~~~~~~~~~~~~----~~~--~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 330 VAHDGP-----------TPTVESLSAALATALT-P----GIRARAAAVAGTIR----TDG--TTVAAKLLLEAIS 382 (404)
T ss_dssp EECSSS-----------SCCHHHHHHHHHHHTS-H----HHHHHHHHHHTTCC----CCH--HHHHHHHHHHHHH
T ss_pred eccCcC-----------CCCHHHHHHHHHHHhC-H----HHHHHHHHHHHHHh----hhH--HHHHHHHHHHHHh
Confidence 999875 7899999999999998 6 89999999999877 222 3445555655543
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.4e-36 Score=309.18 Aligned_cols=364 Identities=18% Similarity=0.260 Sum_probs=240.6
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCC--CCCCCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLP--DDIEIP 78 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~ 78 (464)
|+..|+|+||+|++.++.||++|++.|+++|+++||+|+++++....+.+... ++.++.++.. .+....
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~ 71 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT---------GPRPVLYHSTLPGPDADP 71 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------SCEEEECCCCSCCTTSCG
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEEcCCcCccccccc
Confidence 66667789999999999999999999999999999999999998776555443 5677766521 011000
Q ss_pred ---CCCCc---ccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEEeccchHHHHHHHHH--H---
Q 048562 79 ---DTDMS---ATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVFNGNCCFSRCILENV--R--- 147 (464)
Q Consensus 79 ---~~~~~---~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~--~--- 147 (464)
..... ..+..........+.+++++.+||+||+|.+..++..+|+.+|||+|.+.+.+.......... .
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 151 (430)
T 2iyf_A 72 EAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWR 151 (430)
T ss_dssp GGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhh
Confidence 00100 011112233467788888899999999998767888999999999999886542100000000 0
Q ss_pred hhCCCCCCC---CC-CCceecCCCCCccccChhhhhhhccccEEEEcCccccChHHHHHHHhhhCCCC-eEEeCcccccc
Q 048562 148 KYKPHEKVS---SD-YEPFVVPGLPDKIELTALSFRFEEKSFGIVVNSFYDLEPAYVEYFKQDLGNDK-AWFVGPVSLCN 222 (464)
Q Consensus 148 ~~~~~~~~~---~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-v~~vGp~~~~~ 222 (464)
......... .. .....--+++.. .. ......+.+++++...++... ..+ +++ ++++||.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~--~~~~~~~~~l~~~~~~~~~~~-----~~~-~~~~v~~vG~~~~~~ 219 (430)
T 2iyf_A 152 EPRQTERGRAYYARFEAWLKENGITEH----PD--TFASHPPRSLVLIPKALQPHA-----DRV-DEDVYTFVGACQGDR 219 (430)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHTTCCSC----HH--HHHHCCSSEEECSCGGGSTTG-----GGS-CTTTEEECCCCC---
T ss_pred hhccchHHHHHHHHHHHHHHHhCCCCC----HH--HHhcCCCcEEEeCcHHhCCCc-----ccC-CCccEEEeCCcCCCC
Confidence 000000000 00 000000011100 00 111134566777766655321 234 456 99999854321
Q ss_pred cCcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhC-CCceEEEEccCCCCCCCCcCC
Q 048562 223 RNIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEAS-NHSFIWVVGKIFQSPGTRKEN 301 (464)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~~~~~~~ 301 (464)
. +..+|.+..+++++||+++||......+.+..+++++++. +.+++|.++..
T Consensus 220 ~-----------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~---------- 272 (430)
T 2iyf_A 220 A-----------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRK---------- 272 (430)
T ss_dssp -------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC------------
T ss_pred C-----------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCC----------
Confidence 0 1224555444678999999999855577888999999886 88998988764
Q ss_pred cccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhHHHHHhh
Q 048562 302 GIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDV 381 (464)
Q Consensus 302 ~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~ 381 (464)
..... +. +.++|+.+.+|+||.++|.++++ ||||||+||++||+++|+|+|++|...||..|++++ ++
T Consensus 273 ~~~~~-l~--------~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~-~~ 340 (430)
T 2iyf_A 273 VTPAE-LG--------ELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADML-QG 340 (430)
T ss_dssp -CGGG-GC--------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HH
T ss_pred CChHH-hc--------cCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHH-HH
Confidence 11110 11 11679999999999999999987 999999999999999999999999999999999999 59
Q ss_pred hcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 048562 382 LKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKN 439 (464)
Q Consensus 382 ~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~ 439 (464)
.|+|+.+... .+++++|.++|.++++|+ .++++++++++.+.+
T Consensus 341 ~g~g~~~~~~-----------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 341 LGVARKLATE-----------EATADLLRETALALVDDP----EVARRLRRIQAEMAQ 383 (430)
T ss_dssp TTSEEECCCC------------CCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHH
T ss_pred cCCEEEcCCC-----------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh
Confidence 9999999765 689999999999999987 788899988888774
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2.9e-36 Score=308.07 Aligned_cols=367 Identities=15% Similarity=0.125 Sum_probs=236.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCC-C-C-----
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDI-E-I----- 77 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~-~----- 77 (464)
..|+||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+... ++.++.++....+ . .
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~ 88 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGH 88 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhc
Confidence 4678999999999999999999999999999999999998876666554 6777777532110 0 0
Q ss_pred --------CC-----CC--CcccH---HHHH----h-----h-hHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCe
Q 048562 78 --------PD-----TD--MSATP---RTDT----S-----M-LQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPR 129 (464)
Q Consensus 78 --------~~-----~~--~~~~~---~~~~----~-----~-~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~ 129 (464)
.. .. .+..+ .... . . ....+.+++++.+||+||+|.++.++..+|+.+|||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~ 168 (441)
T 2yjn_A 89 DIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTPH 168 (441)
T ss_dssp HHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTCCE
T ss_pred ccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCCCE
Confidence 00 00 00000 0001 1 1 4455666777889999999987778899999999999
Q ss_pred EEEeccchHHHHHHHHHHhhCCCCCCCCCCCceecCCCCCccccChhhhhhhcccc-------------EEEEcCccccC
Q 048562 130 IVFNGNCCFSRCILENVRKYKPHEKVSSDYEPFVVPGLPDKIELTALSFRFEEKSF-------------GIVVNSFYDLE 196 (464)
Q Consensus 130 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~ 196 (464)
|.+...+............. ....|.... .......+....... ..+......+.
T Consensus 169 v~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~ 236 (441)
T 2yjn_A 169 ARLLWGPDITTRARQNFLGL-----------LPDQPEEHR-EDPLAEWLTWTLEKYGGPAFDEEVVVGQWTIDPAPAAIR 236 (441)
T ss_dssp EEECSSCCHHHHHHHHHHHH-----------GGGSCTTTC-CCHHHHHHHHHHHHTTCCCCCGGGTSCSSEEECSCGGGS
T ss_pred EEEecCCCcchhhhhhhhhh-----------ccccccccc-cchHHHHHHHHHHHcCCCCCCccccCCCeEEEecCcccc
Confidence 99865543221111100000 000010000 000000011011011 11111111111
Q ss_pred hHHHHHHHhhhCCCCeEEeCcccccccCcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCC---CHHhHHHH
Q 048562 197 PAYVEYFKQDLGNDKAWFVGPVSLCNRNIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARL---SPEQLLEI 273 (464)
Q Consensus 197 ~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~---~~~~~~~~ 273 (464)
.+ ..+ +. ..+++. +...+.++.+|++..+++++|||++||+... ..+.+..+
T Consensus 237 ~~------~~~--~~-~~~~~~----------------~~~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~ 291 (441)
T 2yjn_A 237 LD------TGL--KT-VGMRYV----------------DYNGPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEEL 291 (441)
T ss_dssp CC------CCC--CE-EECCCC----------------CCCSSCCCCGGGSSCCSSCEEEEEC----------CCSTTTT
T ss_pred CC------CCC--CC-Cceeee----------------CCCCCcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHH
Confidence 00 000 00 011110 0002345678988656678999999999863 34567788
Q ss_pred HHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHH
Q 048562 274 AYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTL 353 (464)
Q Consensus 274 ~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~ 353 (464)
++++.+.+.++||+++.. .... +. +.++|+++.+|+||.++|+++++ ||||||.||++
T Consensus 292 ~~al~~~~~~~v~~~g~~-----------~~~~-l~--------~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~ 349 (441)
T 2yjn_A 292 LGAVGDVDAEIIATFDAQ-----------QLEG-VA--------NIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWH 349 (441)
T ss_dssp HHHHHTSSSEEEECCCTT-----------TTSS-CS--------SCCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHH
T ss_pred HHHHHcCCCEEEEEECCc-----------chhh-hc--------cCCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHH
Confidence 899999999999998764 1111 21 11679999999999999977776 99999999999
Q ss_pred HHHHcCCceeecccccccchhHHHHHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 048562 354 ESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGEL 433 (464)
Q Consensus 354 Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l 433 (464)
|++++|||+|++|...||+.||+++ ++.|+|+.++.. .+++++|.++|+++++|+ .++++++++
T Consensus 350 Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~-----------~~~~~~l~~~i~~ll~~~----~~~~~~~~~ 413 (441)
T 2yjn_A 350 TAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPVP-----------ELTPDQLRESVKRVLDDP----AHRAGAARM 413 (441)
T ss_dssp HHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCTT-----------TCCHHHHHHHHHHHHHCH----HHHHHHHHH
T ss_pred HHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEcccc-----------cCCHHHHHHHHHHHhcCH----HHHHHHHHH
Confidence 9999999999999999999999999 599999999775 789999999999999987 899999999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHh
Q 048562 434 GEKAKNAVEEGGSSFIDAEALLQELKS 460 (464)
Q Consensus 434 ~~~~~~~~~~gg~~~~~~~~l~~~~~~ 460 (464)
++.+.+ .++ ...+.+.++++.+
T Consensus 414 ~~~~~~---~~~--~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 414 RDDMLA---EPS--PAEVVGICEELAA 435 (441)
T ss_dssp HHHHHT---SCC--HHHHHHHHHHHHH
T ss_pred HHHHHc---CCC--HHHHHHHHHHHHH
Confidence 999883 333 3445666666544
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=3.9e-35 Score=294.08 Aligned_cols=349 Identities=13% Similarity=0.102 Sum_probs=238.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCC--CC-C-----CCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPD--DI-E-----IPD 79 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~-~-----~~~ 79 (464)
|||++++.++.||++|++.|+++|+++||+|+|++++...+.+... ++.++.++... +. . .+.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 5899999999999999999999999999999999998765555544 56666664221 00 0 000
Q ss_pred -C-C---CcccH-----HHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEEeccchHHHHHHHHHHhh
Q 048562 80 -T-D---MSATP-----RTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVFNGNCCFSRCILENVRKY 149 (464)
Q Consensus 80 -~-~---~~~~~-----~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 149 (464)
. . ....+ ..........+.+++++.+||+||+|.+..++..+|+.+|||++.+...+...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~---------- 141 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA---------- 141 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC----------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc----------
Confidence 0 0 00001 01112235667777888999999999877788889999999999885432100
Q ss_pred CCCCCCCCCCCceecCCCCCcc-ccChhhhhh-----hccccEEEEcCccccChHHHHHHHhhhCCCCeEEeCccccccc
Q 048562 150 KPHEKVSSDYEPFVVPGLPDKI-ELTALSFRF-----EEKSFGIVVNSFYDLEPAYVEYFKQDLGNDKAWFVGPVSLCNR 223 (464)
Q Consensus 150 ~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vGp~~~~~~ 223 (464)
..+.... ......... ......++.++...++... .+...++.+++. .
T Consensus 142 ---------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~---~-- 195 (384)
T 2p6p_A 142 ---------------DGIHPGADAELRPELSELGLERLPAPDLFIDICPPSLRPAN------AAPARMMRHVAT---S-- 195 (384)
T ss_dssp ---------------TTTHHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT------SCCCEECCCCCC---C--
T ss_pred ---------------chhhHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC------CCCCCceEecCC---C--
Confidence 0000000 000000000 0002344555544443210 010112223311 0
Q ss_pred CcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCC-----CHHhHHHHHHHHhhCCCceEEEEccCCCCCCCC
Q 048562 224 NIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARL-----SPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTR 298 (464)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~-----~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~ 298 (464)
.+.++.+|++..+++++|||++||.... ..+.+..+++++.+.+.+++|++++.
T Consensus 196 --------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~------- 254 (384)
T 2p6p_A 196 --------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDT------- 254 (384)
T ss_dssp --------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHH-------
T ss_pred --------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCC-------
Confidence 1234567877644568999999999864 45778899999999999999998653
Q ss_pred cCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhHHHH
Q 048562 299 KENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNEKLI 378 (464)
Q Consensus 299 ~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v 378 (464)
. .+.+. .. ++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..|+.++
T Consensus 255 ----~-----~~~l~-~~---~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~ 318 (384)
T 2p6p_A 255 ----V-----AEALR-AE---VPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRV 318 (384)
T ss_dssp ----H-----HHHHH-HH---CTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHH
T ss_pred ----C-----HHhhC-CC---CCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHH
Confidence 1 11121 12 679999 99999999988777 999999999999999999999999999999999999
Q ss_pred HhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 048562 379 SDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDAEALLQEL 458 (464)
Q Consensus 379 ~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~~ 458 (464)
++.|+|+.++.. .+++++|.++|+++++|+ +++++++++++.+++ .+| ...+.+.++.+
T Consensus 319 -~~~g~g~~~~~~-----------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~---~~~--~~~~~~~i~~~ 377 (384)
T 2p6p_A 319 -ADYGAAIALLPG-----------EDSTEAIADSCQELQAKD----TYARRAQDLSREISG---MPL--PATVVTALEQL 377 (384)
T ss_dssp -HHHTSEEECCTT-----------CCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT---SCC--HHHHHHHHHHH
T ss_pred -HHCCCeEecCcC-----------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh---CCC--HHHHHHHHHHH
Confidence 599999999765 689999999999999987 899999999999983 443 33345555554
Q ss_pred H
Q 048562 459 K 459 (464)
Q Consensus 459 ~ 459 (464)
.
T Consensus 378 ~ 378 (384)
T 2p6p_A 378 A 378 (384)
T ss_dssp H
T ss_pred h
Confidence 4
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=4.9e-35 Score=294.82 Aligned_cols=340 Identities=17% Similarity=0.193 Sum_probs=217.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCC--------
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIE-------- 76 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------- 76 (464)
..+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+... ++.+..++.+..+.
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 83 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDRE 83 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTT
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhcc
Confidence 4578999999999999999999999999999999999998777766665 55556654211100
Q ss_pred CCCCCC-------cc----cHHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEEeccchHHHHHH--
Q 048562 77 IPDTDM-------SA----TPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVFNGNCCFSRCIL-- 143 (464)
Q Consensus 77 ~~~~~~-------~~----~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~-- 143 (464)
...... .. .+......+...+.+++++.+||+|++|....++..+|+.+|+|++.+...........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~ 163 (398)
T 4fzr_A 84 GNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKSA 163 (398)
T ss_dssp SCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHHH
T ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhHH
Confidence 000000 00 01111223456788888899999999998777788899999999998765432111000
Q ss_pred --HHHHhhCCCCCCCCCCCceecCCCCCccccChhhhhhhccccEEEEcCccccChHHHHHHHhhhCCCCeEEeCccccc
Q 048562 144 --ENVRKYKPHEKVSSDYEPFVVPGLPDKIELTALSFRFEEKSFGIVVNSFYDLEPAYVEYFKQDLGNDKAWFVGPVSLC 221 (464)
Q Consensus 144 --~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vGp~~~~ 221 (464)
........ ...++.. ......+......+.. ..... ...+.++++..
T Consensus 164 ~~~~l~~~~~---------~~~~~~~--------------~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~-- 212 (398)
T 4fzr_A 164 GVGELAPELA---------ELGLTDF--------------PDPLLSIDVCPPSMEA-----QPKPG-TTKMRYVPYNG-- 212 (398)
T ss_dssp HHHHTHHHHH---------TTTCSSC--------------CCCSEEEECSCGGGC---------CC-CEECCCCCCCC--
T ss_pred HHHHHHHHHH---------HcCCCCC--------------CCCCeEEEeCChhhCC-----CCCCC-CCCeeeeCCCC--
Confidence 00000000 0000000 0001111111111110 00000 11111221100
Q ss_pred ccCcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCC--------CHHhHHHHHHHHhhCCCceEEEEccCCC
Q 048562 222 NRNIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARL--------SPEQLLEIAYGLEASNHSFIWVVGKIFQ 293 (464)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~--------~~~~~~~~~~al~~~~~~~v~~~~~~~~ 293 (464)
.+.++.+|+...+++++||+++||.... ..+.+..+++++.+.+.+++|+.++.
T Consensus 213 ----------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~-- 274 (398)
T 4fzr_A 213 ----------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDK-- 274 (398)
T ss_dssp ----------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC---
T ss_pred ----------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCc--
Confidence 1234456665545678999999999753 34668899999999999999998765
Q ss_pred CCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccch
Q 048562 294 SPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFS 373 (464)
Q Consensus 294 ~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~ 373 (464)
.. +. +. +.++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||..
T Consensus 275 ----~~--~~----l~--------~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~ 334 (398)
T 4fzr_A 275 ----LA--QT----LQ--------PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWD 334 (398)
T ss_dssp -------------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHH
T ss_pred ----ch--hh----hc--------cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHH
Confidence 10 01 21 11779999999999999999887 9999999999999999999999999999999
Q ss_pred hHHHHHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 048562 374 NEKLISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAK 438 (464)
Q Consensus 374 na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~ 438 (464)
|+.++ ++.|+|+.++.. .++++.|.++|.++|+|+ ++++++++.++++.
T Consensus 335 ~a~~~-~~~g~g~~~~~~-----------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 335 SARLL-HAAGAGVEVPWE-----------QAGVESVLAACARIRDDS----SYVGNARRLAAEMA 383 (398)
T ss_dssp HHHHH-HHTTSEEECC------------------CHHHHHHHHHHCT----HHHHHHHHHHHHHT
T ss_pred HHHHH-HHcCCEEecCcc-----------cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHH
Confidence 99999 599999999875 689999999999999998 89999999999887
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.4e-33 Score=284.19 Aligned_cols=349 Identities=16% Similarity=0.186 Sum_probs=234.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCC--C-----
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIE--I----- 77 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~----- 77 (464)
.++|||+|++.++.||++|++.||++|+++||+|+++++ .+.+.+... ++.+..++.+..+. .
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAK 87 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhccc
Confidence 357899999999999999999999999999999999999 776666654 67777775321110 0
Q ss_pred -----------CCCCCccc----HHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEEeccchHHHHH
Q 048562 78 -----------PDTDMSAT----PRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVFNGNCCFSRCI 142 (464)
Q Consensus 78 -----------~~~~~~~~----~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 142 (464)
........ +..........+.+++++.+||+||+|....++..+|+.+|+|++.+..........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~~~ 167 (398)
T 3oti_A 88 DNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTRGM 167 (398)
T ss_dssp HCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCTTH
T ss_pred CCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCccch
Confidence 11111111 122233456788899999999999999777788899999999999875331100000
Q ss_pred HHHHHhhCCCCCCCCCCCceecCCCCCccccChhhhhhh----ccccEEEEcCccccChHHHHHHHhhhCCCCeEEeCcc
Q 048562 143 LENVRKYKPHEKVSSDYEPFVVPGLPDKIELTALSFRFE----EKSFGIVVNSFYDLEPAYVEYFKQDLGNDKAWFVGPV 218 (464)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vGp~ 218 (464)
. +.+ .......+... ......+... ++.+....... ...+.++ |
T Consensus 168 ~---------------------~~~---~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~-~- 215 (398)
T 3oti_A 168 H---------------------RSI---ASFLTDLMDKHQVSLPEPVATIESF-----PPSLLLEAEPE-GWFMRWV-P- 215 (398)
T ss_dssp H---------------------HHH---HTTCHHHHHHTTCCCCCCSEEECSS-----CGGGGTTSCCC-SBCCCCC-C-
T ss_pred h---------------------hHH---HHHHHHHHHHcCCCCCCCCeEEEeC-----CHHHCCCCCCC-CCCcccc-C-
Confidence 0 000 00000000000 0001111100 11000000000 0001111 0
Q ss_pred cccccCcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCC--CHHhHHHHHHHHhhCCCceEEEEccCCCCCC
Q 048562 219 SLCNRNIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARL--SPEQLLEIAYGLEASNHSFIWVVGKIFQSPG 296 (464)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~--~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~ 296 (464)
...+..+.+|+...+++++||+++||.... ..+.+..+++++.+.+.+++|+.++.
T Consensus 216 -----------------~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~----- 273 (398)
T 3oti_A 216 -----------------YGGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDL----- 273 (398)
T ss_dssp -----------------CCCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTS-----
T ss_pred -----------------CCCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCc-----
Confidence 002234556776555678999999999653 56778899999999999999998775
Q ss_pred CCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhH-
Q 048562 297 TRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNE- 375 (464)
Q Consensus 297 ~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na- 375 (464)
.. +. +. +.++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|+
T Consensus 274 -~~--~~----l~--------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~ 336 (398)
T 3oti_A 274 -DI--SP----LG--------TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTA 336 (398)
T ss_dssp -CC--GG----GC--------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTT
T ss_pred -Ch--hh----hc--------cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHH
Confidence 10 11 11 11679999999999999999887 999999999999999999999999999999999
Q ss_pred -HHHHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Q 048562 376 -KLISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDAEAL 454 (464)
Q Consensus 376 -~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l 454 (464)
.++ ++.|+|+.++.. ..+++.|. ++++|+ .++++++++++++.+ ..+ ...+.+.
T Consensus 337 ~~~~-~~~g~g~~~~~~-----------~~~~~~l~----~ll~~~----~~~~~~~~~~~~~~~---~~~--~~~~~~~ 391 (398)
T 3oti_A 337 REAV-SRRGIGLVSTSD-----------KVDADLLR----RLIGDE----SLRTAAREVREEMVA---LPT--PAETVRR 391 (398)
T ss_dssp HHHH-HHHTSEEECCGG-----------GCCHHHHH----HHHHCH----HHHHHHHHHHHHHHT---SCC--HHHHHHH
T ss_pred HHHH-HHCCCEEeeCCC-----------CCCHHHHH----HHHcCH----HHHHHHHHHHHHHHh---CCC--HHHHHHH
Confidence 999 599999999875 67777776 888887 899999999999883 333 3445566
Q ss_pred HHHHH
Q 048562 455 LQELK 459 (464)
Q Consensus 455 ~~~~~ 459 (464)
++++.
T Consensus 392 l~~l~ 396 (398)
T 3oti_A 392 IVERI 396 (398)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66553
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.1e-32 Score=276.80 Aligned_cols=353 Identities=12% Similarity=0.107 Sum_probs=231.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEe-cCCCCCC------CCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTL-HLPDDIE------IPD 79 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~------~~~ 79 (464)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.+..+ ..+.... ...
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 37999999999999999999999999999999999987766666554 5666665 2211111 000
Q ss_pred C---------CCc-ccHHHHHhhh-------HHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEEeccchHH---
Q 048562 80 T---------DMS-ATPRTDTSML-------QEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVFNGNCCFS--- 139 (464)
Q Consensus 80 ~---------~~~-~~~~~~~~~~-------~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~~~~~~--- 139 (464)
. ... ..+......+ ...+.+++++.+||+|++|.....+..+|+.+|||++.+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~ 151 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAGP 151 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTTH
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcccccc
Confidence 0 000 0111112223 6677888899999999999766678889999999999985433110
Q ss_pred --HHHHHHHHhhCCCCCCCCCCCceecCCCCCccccChhhhhhhccccEEEEcCccccChHHHHHHHhhhCCCCeEEeCc
Q 048562 140 --RCILENVRKYKPHEKVSSDYEPFVVPGLPDKIELTALSFRFEEKSFGIVVNSFYDLEPAYVEYFKQDLGNDKAWFVGP 217 (464)
Q Consensus 140 --~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vGp 217 (464)
............ ...++. .......+......+. ...... ...+.|+ |
T Consensus 152 ~~~~~~~~~~~~~~---------~~~~~~--------------~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~-p 201 (391)
T 3tsa_A 152 FSDRAHELLDPVCR---------HHGLTG--------------LPTPELILDPCPPSLQ-----ASDAPQ-GAPVQYV-P 201 (391)
T ss_dssp HHHHHHHHHHHHHH---------HTTSSS--------------SCCCSEEEECSCGGGS-----CTTSCC-CEECCCC-C
T ss_pred ccchHHHHHHHHHH---------HcCCCC--------------CCCCceEEEecChhhc-----CCCCCc-cCCeeee-c
Confidence 000000000000 000000 0000111111111111 000000 1111122 1
Q ss_pred ccccccCcchhhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCC---CCHHhHHHHHHHHhhC-CCceEEEEccCCC
Q 048562 218 VSLCNRNIEDKAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLAR---LSPEQLLEIAYGLEAS-NHSFIWVVGKIFQ 293 (464)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~---~~~~~~~~~~~al~~~-~~~~v~~~~~~~~ 293 (464)
.. .+..+.+|+...+++++|++++||... ...+.+..++++ ++. +.+++|+.++.
T Consensus 202 ~~------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~-- 260 (391)
T 3tsa_A 202 YN------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPE-- 260 (391)
T ss_dssp CC------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGG--
T ss_pred CC------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCc--
Confidence 10 123345676655567899999999953 236778888888 887 78999988764
Q ss_pred CCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccch
Q 048562 294 SPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFS 373 (464)
Q Consensus 294 ~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~ 373 (464)
.... +.. .++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..
T Consensus 261 ---------~~~~-l~~--------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~ 320 (391)
T 3tsa_A 261 ---------HRAL-LTD--------LPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFD 320 (391)
T ss_dssp ---------GGGG-CTT--------CCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHH
T ss_pred ---------chhh-ccc--------CCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHH
Confidence 1111 211 1679999999999999977777 9999999999999999999999999999999
Q ss_pred hHHHHHhhhcceEEecc--ccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Q 048562 374 NEKLISDVLKIGVKVGS--VNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDA 451 (464)
Q Consensus 374 na~~v~~~~G~G~~l~~--~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~ 451 (464)
|+.++ ++.|+|+.+.. . ..+++.|.++|.++|+|+ .++++++++++.+.+ .++ ...+
T Consensus 321 ~a~~~-~~~g~g~~~~~~~~-----------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~~---~~~--~~~~ 379 (391)
T 3tsa_A 321 YARNL-AAAGAGICLPDEQA-----------QSDHEQFTDSIATVLGDT----GFAAAAIKLSDEITA---MPH--PAAL 379 (391)
T ss_dssp HHHHH-HHTTSEEECCSHHH-----------HTCHHHHHHHHHHHHTCT----HHHHHHHHHHHHHHT---SCC--HHHH
T ss_pred HHHHH-HHcCCEEecCcccc-----------cCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHc---CCC--HHHH
Confidence 99999 59999999976 5 589999999999999998 899999999998872 333 3445
Q ss_pred HHHHHHHHh
Q 048562 452 EALLQELKS 460 (464)
Q Consensus 452 ~~l~~~~~~ 460 (464)
.+.++++.+
T Consensus 380 ~~~i~~~~~ 388 (391)
T 3tsa_A 380 VRTLENTAA 388 (391)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHHh
Confidence 666665543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.98 E-value=2.6e-30 Score=261.06 Aligned_cols=364 Identities=19% Similarity=0.250 Sum_probs=238.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCC--CCC-------
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLP--DDI------- 75 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~------- 75 (464)
..+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.+..++.. .++
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 88 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRIR 88 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHHH
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhhh
Confidence 4578999999999999999999999999999999999998665555544 6777776520 000
Q ss_pred -C---CCC---CCCcccHHHH-----HhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEEeccchH----H
Q 048562 76 -E---IPD---TDMSATPRTD-----TSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVFNGNCCF----S 139 (464)
Q Consensus 76 -~---~~~---~~~~~~~~~~-----~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~~~~~----~ 139 (464)
. .+. ......+... .......+.+++++.+||+||+|....++..+|+.+|+|+|.+...... .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~~ 168 (412)
T 3otg_A 89 FDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDLT 168 (412)
T ss_dssp HSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSHHH
T ss_pred hcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCchhhh
Confidence 0 000 0001111111 1123477888889999999999977777888999999999987544321 0
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceecCCCCCccccChhhhhhhccccEEEEcCccccChHHHHHHHhhhCCCCeEEeCccc
Q 048562 140 RCILENVRKYKPHEKVSSDYEPFVVPGLPDKIELTALSFRFEEKSFGIVVNSFYDLEPAYVEYFKQDLGNDKAWFVGPVS 219 (464)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vGp~~ 219 (464)
............ --+++..... .....+.++..+-..+.. +.... ......+.+..
T Consensus 169 ~~~~~~~~~~~~------------~~g~~~~~~~------~~~~~d~~i~~~~~~~~~-----~~~~~-~~~~~~~~~~~ 224 (412)
T 3otg_A 169 RSIEEEVRGLAQ------------RLGLDLPPGR------IDGFGNPFIDIFPPSLQE-----PEFRA-RPRRHELRPVP 224 (412)
T ss_dssp HHHHHHHHHHHH------------HTTCCCCSSC------CGGGGCCEEECSCGGGSC-----HHHHT-CTTEEECCCCC
T ss_pred HHHHHHHHHHHH------------HcCCCCCccc------ccCCCCeEEeeCCHHhcC-----CcccC-CCCcceeeccC
Confidence 000000000000 0000000000 001122223222222221 11111 11111111110
Q ss_pred ccccCcchhhhcCCCCCCCccccccc-cCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCC
Q 048562 220 LCNRNIEDKAERGQKTSIDEGKILSF-LDSKETNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTR 298 (464)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~ 298 (464)
.. ...+..+| ....+++++|++++||......+.+..+++++.+.+.+++|..++.
T Consensus 225 ~~----------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~------- 281 (412)
T 3otg_A 225 FA----------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPS------- 281 (412)
T ss_dssp CC----------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSS-------
T ss_pred CC----------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCC-------
Confidence 00 12234455 2223457799999999975567888999999999999999998875
Q ss_pred cCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhHHHH
Q 048562 299 KENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNEKLI 378 (464)
Q Consensus 299 ~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v 378 (464)
..... +.. .++|+.+.+|+|+.++|+++++ ||+|||.+|++||+++|+|+|++|...||..|+..+
T Consensus 282 ---~~~~~-l~~--------~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v 347 (412)
T 3otg_A 282 ---LDVSG-LGE--------VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAV 347 (412)
T ss_dssp ---CCCTT-CCC--------CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH
T ss_pred ---CChhh-hcc--------CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHH
Confidence 10011 211 1679999999999999999887 999999999999999999999999999999999999
Q ss_pred HhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 048562 379 SDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDAEALLQEL 458 (464)
Q Consensus 379 ~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~~ 458 (464)
++.|+|..+... .++++.|.++|.++++|+ .+++++.+.++++.+ .. + ...+.+.++++
T Consensus 348 -~~~g~g~~~~~~-----------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~~---~~-~-~~~~~~~~~~l 406 (412)
T 3otg_A 348 -AQAGAGDHLLPD-----------NISPDSVSGAAKRLLAEE----SYRAGARAVAAEIAA---MP-G-PDEVVRLLPGF 406 (412)
T ss_dssp -HHHTSEEECCGG-----------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHH---SC-C-HHHHHTTHHHH
T ss_pred -HHcCCEEecCcc-----------cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHhc---CC-C-HHHHHHHHHHH
Confidence 599999999875 689999999999999997 788888888888773 33 3 34445555554
Q ss_pred H
Q 048562 459 K 459 (464)
Q Consensus 459 ~ 459 (464)
.
T Consensus 407 ~ 407 (412)
T 3otg_A 407 A 407 (412)
T ss_dssp H
T ss_pred h
Confidence 3
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=4.2e-30 Score=255.81 Aligned_cols=323 Identities=15% Similarity=0.130 Sum_probs=204.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchh--hhhhhhhhccCCCCCeEEEEecCCCCCC-CCCCCCc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHAL--SFQKSINRNQQSGLPITIKTLHLPDDIE-IPDTDMS 83 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~ 83 (464)
+.||++...|+.||++|+++||++|+++||+|+|+++....+ .+.+. ++.++.++.. ++. .......
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~---------g~~~~~i~~~-~~~~~~~~~~~ 71 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA---------GLPLHLIQVS-GLRGKGLKSLV 71 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG---------TCCEEECC--------------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc---------CCcEEEEECC-CcCCCCHHHHH
Confidence 358999999899999999999999999999999999865432 23333 5566666532 121 1111111
Q ss_pred ccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch--hhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCCCCCCCc
Q 048562 84 ATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH--WSADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKVSSDYEP 161 (464)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (464)
...+... ....+..+++++.+||+||++..+. .+..+|+.+|+|++..-..
T Consensus 72 ~~~~~~~-~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n-------------------------- 124 (365)
T 3s2u_A 72 KAPLELL-KSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN-------------------------- 124 (365)
T ss_dssp -CHHHHH-HHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS--------------------------
T ss_pred HHHHHHH-HHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc--------------------------
Confidence 1222221 1234556788999999999997665 3566889999999976221
Q ss_pred eecCCCCCccccChhhhhhhccccEEEEcCccccChHHHHHHHhhhCCCCeEEeCcccccccCcchhhhcCCCCCCCccc
Q 048562 162 FVVPGLPDKIELTALSFRFEEKSFGIVVNSFYDLEPAYVEYFKQDLGNDKAWFVGPVSLCNRNIEDKAERGQKTSIDEGK 241 (464)
Q Consensus 162 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~ 241 (464)
.+|++.+++ + ...... +...+++..+ . ..+..++|+....... .+.
T Consensus 125 -~~~G~~nr~------l--~~~a~~-v~~~~~~~~~---------~-~~k~~~~g~pvr~~~~-------------~~~- 170 (365)
T 3s2u_A 125 -AVAGTANRS------L--APIARR-VCEAFPDTFP---------A-SDKRLTTGNPVRGELF-------------LDA- 170 (365)
T ss_dssp -SSCCHHHHH------H--GGGCSE-EEESSTTSSC---------C----CEECCCCCCGGGC-------------CCT-
T ss_pred -hhhhhHHHh------h--ccccce-eeeccccccc---------C-cCcEEEECCCCchhhc-------------cch-
Confidence 122221110 0 011112 2223332111 1 2455677753322110 000
Q ss_pred cccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhC----CCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhc
Q 048562 242 ILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEAS----NHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMG 317 (464)
Q Consensus 242 l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~ 317 (464)
.......++++.|++..||.... ...+.+.+++..+ +..++|.++.. ..+...+...
T Consensus 171 -~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~----------------~~~~~~~~~~ 231 (365)
T 3s2u_A 171 -HARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQ----------------HAEITAERYR 231 (365)
T ss_dssp -TSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTT----------------THHHHHHHHH
T ss_pred -hhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcc----------------ccccccceec
Confidence 11112223567899999998742 2334455666543 45677777665 1122223332
Q ss_pred CCCCcEEecCcccH-HHHhcccCceeeccccchhhHHHHHHcCCceeecccc----cccchhHHHHHhhhcceEEecccc
Q 048562 318 ESKRGLIIRGWAPQ-LLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPIT----AEQFSNEKLISDVLKIGVKVGSVN 392 (464)
Q Consensus 318 ~~~~nv~v~~~vpq-~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~----~DQ~~na~~v~~~~G~G~~l~~~~ 392 (464)
+.+.++.+.+|+++ .++++.+++ +|||+|.+|+.|++++|+|+|.+|+. .+|..||+.+ ++.|+|..++..
T Consensus 232 ~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l-~~~G~a~~l~~~- 307 (365)
T 3s2u_A 232 TVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFL-VRSGAGRLLPQK- 307 (365)
T ss_dssp HTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHH-HTTTSEEECCTT-
T ss_pred ccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHH-HHCCCEEEeecC-
Confidence 23678899999986 579999888 99999999999999999999999973 5899999999 599999999876
Q ss_pred ccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 048562 393 WVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGEL 433 (464)
Q Consensus 393 ~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l 433 (464)
.++++.|.++|.++++|++..+.|.++++++
T Consensus 308 ----------~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 308 ----------STGAAELAAQLSEVLMHPETLRSMADQARSL 338 (365)
T ss_dssp ----------TCCHHHHHHHHHHHHHCTHHHHHHHHHHHHT
T ss_pred ----------CCCHHHHHHHHHHHHCCHHHHHHHHHHHHhc
Confidence 7899999999999999996665666665544
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=1e-26 Score=205.87 Aligned_cols=162 Identities=23% Similarity=0.335 Sum_probs=140.0
Q ss_pred CccccccccCcCCCCcEEEEecCCCCC-CCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhh
Q 048562 238 DEGKILSFLDSKETNSVLYISFGSLAR-LSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERM 316 (464)
Q Consensus 238 ~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~ 316 (464)
+++++.+|++..+++++|||++||... ...+.+..+++++++.+.+++|++++. .++.
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~----------------~~~~----- 65 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN----------------KPDT----- 65 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS----------------CCTT-----
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc----------------Cccc-----
Confidence 678899999876667899999999974 567788999999999999999998765 1111
Q ss_pred cCCCCcEEecCcccHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEEeccccccCC
Q 048562 317 GESKRGLIIRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVGSVNWVSW 396 (464)
Q Consensus 317 ~~~~~nv~v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 396 (464)
.++|+.+.+|+|+.+++.|+.+++||||||++|++|++++|+|+|++|...||..||+++ ++.|+|+.++..
T Consensus 66 --~~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~----- 137 (170)
T 2o6l_A 66 --LGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFN----- 137 (170)
T ss_dssp --CCTTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTT-----
T ss_pred --CCCcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccc-----
Confidence 156899999999999998878888999999999999999999999999999999999999 599999999865
Q ss_pred CCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 048562 397 STEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAK 438 (464)
Q Consensus 397 ~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~ 438 (464)
.++.++|.++|.++++|+ .|+++++++++.++
T Consensus 138 ------~~~~~~l~~~i~~ll~~~----~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 138 ------TMSSTDLLNALKRVINDP----SYKENVMKLSRIQH 169 (170)
T ss_dssp ------TCCHHHHHHHHHHHHHCH----HHHHHHHHHC----
T ss_pred ------cCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHhh
Confidence 789999999999999987 89999999999876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.85 E-value=1e-19 Score=180.20 Aligned_cols=316 Identities=15% Similarity=0.107 Sum_probs=193.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchh--hhhhhhhhccCCCCCeEEEEecCCCCCCCCC-CCCcc
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHAL--SFQKSINRNQQSGLPITIKTLHLPDDIEIPD-TDMSA 84 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~ 84 (464)
+||++++.+..||..+++.|+++|.++||+|++++...... .+... ++.+..++.+. +.... .....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~---------g~~~~~~~~~~-~~~~~~~~~~~ 76 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH---------GIEIDFIRISG-LRGKGIKALIA 76 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG---------TCEEEECCCCC-CTTCCHHHHHT
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc---------CCceEEecCCc-cCcCccHHHHH
Confidence 79999998878999999999999999999999999865321 22222 56666654321 10000 00000
Q ss_pred cHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch--hhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCCCCCCCce
Q 048562 85 TPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH--WSADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKVSSDYEPF 162 (464)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (464)
..... ......+.+++++.+||+|+++.... .+..+++.+|+|+|.......
T Consensus 77 ~~~~~-~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------------------- 130 (364)
T 1f0k_A 77 APLRI-FNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI------------------------- 130 (364)
T ss_dssp CHHHH-HHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS-------------------------
T ss_pred HHHHH-HHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC-------------------------
Confidence 11111 12345677888889999999996542 456678889999986532210
Q ss_pred ecCCCCCccccChhhhhhhccccEEEEcCccccChHHHHHHHhhhCCCCeEEeCcccccccCcchhhhcCCCCCCCcccc
Q 048562 163 VVPGLPDKIELTALSFRFEEKSFGIVVNSFYDLEPAYVEYFKQDLGNDKAWFVGPVSLCNRNIEDKAERGQKTSIDEGKI 242 (464)
Q Consensus 163 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l 242 (464)
++. . .+ ......+.+++.+ ... + +++..+|+...... . .....
T Consensus 131 --~~~---~---~~--~~~~~~d~v~~~~-~~~-----------~--~~~~~i~n~v~~~~-----~--------~~~~~ 173 (364)
T 1f0k_A 131 --AGL---T---NK--WLAKIATKVMQAF-PGA-----------F--PNAEVVGNPVRTDV-----L--------ALPLP 173 (364)
T ss_dssp --CCH---H---HH--HHTTTCSEEEESS-TTS-----------S--SSCEECCCCCCHHH-----H--------TSCCH
T ss_pred --CcH---H---HH--HHHHhCCEEEecC-hhh-----------c--CCceEeCCccchhh-----c--------ccchh
Confidence 000 0 00 0011223333322 111 2 13445553221100 0 00000
Q ss_pred ccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhC--CCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCC-
Q 048562 243 LSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEAS--NHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGES- 319 (464)
Q Consensus 243 ~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~- 319 (464)
.+.+...+++++|++..|+.. .......+++++..+ +.++++.+|.. . .+.+.+...+.
T Consensus 174 ~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~-----------~-----~~~l~~~~~~~~ 235 (364)
T 1f0k_A 174 QQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKG-----------S-----QQSVEQAYAEAG 235 (364)
T ss_dssp HHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTT-----------C-----HHHHHHHHHHTT
T ss_pred hhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCc-----------h-----HHHHHHHHhhcC
Confidence 111122224567888888875 344445556666654 45666777665 1 12222222111
Q ss_pred CCcEEecCcc-cHHHHhcccCceeeccccchhhHHHHHHcCCceeecccc---cccchhHHHHHhhhcceEEeccccccC
Q 048562 320 KRGLIIRGWA-PQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPIT---AEQFSNEKLISDVLKIGVKVGSVNWVS 395 (464)
Q Consensus 320 ~~nv~v~~~v-pq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~---~DQ~~na~~v~~~~G~G~~l~~~~~~~ 395 (464)
-+|+.+.+|+ +..+++..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+ .+.|.|..++..
T Consensus 236 ~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~-~~~g~g~~~~~~---- 308 (364)
T 1f0k_A 236 QPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL-EKAGAAKIIEQP---- 308 (364)
T ss_dssp CTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH-HHTTSEEECCGG----
T ss_pred CCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHH-HhCCcEEEeccc----
Confidence 2589999999 45788988888 99999999999999999999999987 7999999999 499999998775
Q ss_pred CCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHH
Q 048562 396 WSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRA 430 (464)
Q Consensus 396 ~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a 430 (464)
.++.++|.++|.++ |++..+.+.+++
T Consensus 309 -------d~~~~~la~~i~~l--~~~~~~~~~~~~ 334 (364)
T 1f0k_A 309 -------QLSVDAVANTLAGW--SRETLLTMAERA 334 (364)
T ss_dssp -------GCCHHHHHHHHHTC--CHHHHHHHHHHH
T ss_pred -------cCCHHHHHHHHHhc--CHHHHHHHHHHH
Confidence 56799999999999 663333333333
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.63 E-value=9.9e-15 Score=138.49 Aligned_cols=266 Identities=10% Similarity=0.053 Sum_probs=161.9
Q ss_pred cEEEEEcCC----CccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCc
Q 048562 8 VEMFFFPYV----GGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMS 83 (464)
Q Consensus 8 ~~vl~~~~~----~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (464)
|||+|-+-+ |.||+.+++.||++|. +|+|++.....+.+... ++....++. .
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~~---------g~~v~~l~~---------~-- 56 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDEI---------PYPVYELSS---------E-- 56 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGGC---------CSCEEECSS---------S--
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHHC---------CCeEEEcCc---------c--
Confidence 457776633 8999999999999999 89999876443333332 444444431 0
Q ss_pred ccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch---hhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCCCCCCC
Q 048562 84 ATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH---WSADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKVSSDYE 160 (464)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~---~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (464)
-...+.+++++.++|+||.|.+.. +...+....+++.+.+- ....
T Consensus 57 ---------d~~~~~~~l~~~~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iD-----------------------D~~~ 104 (282)
T 3hbm_A 57 ---------SIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFD-----------------------DEIK 104 (282)
T ss_dssp ---------CHHHHHHHHHHHTCSEEEEECTTCCHHHHHHHHHHHCCEEEEEC-----------------------SSCC
T ss_pred ---------CHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHhcCcEEEEEe-----------------------cCCC
Confidence 123455677778999999999875 22333333588888771 1000
Q ss_pred ceecCCCCCccccChhhhhhhccccEEEEcCccccChHHHHHHHhhhCCCCeEEeCcccccccCcchhhhcCCCCCCCcc
Q 048562 161 PFVVPGLPDKIELTALSFRFEEKSFGIVVNSFYDLEPAYVEYFKQDLGNDKAWFVGPVSLCNRNIEDKAERGQKTSIDEG 240 (464)
Q Consensus 161 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~ 240 (464)
+.. ++ +++|.-..-+... | ....+....++.||--.+ +++
T Consensus 105 ----~~~----------------~D-llin~~~~~~~~~--Y-~~~~p~~~~~l~G~~Y~~----------------lR~ 144 (282)
T 3hbm_A 105 ----PHH----------------CD-ILLNVNAYAKASD--Y-EGLVPFKCEVRCGFSYAL----------------IRE 144 (282)
T ss_dssp ----CCC----------------CS-EEEECSTTCCGGG--G-TTTCC-CCEEEESGGGCC----------------CCH
T ss_pred ----ccc----------------CC-EEEeCCcccchhh--c-cccCCCCCeEeeCCcccc----------------cCH
Confidence 111 11 2222111011000 0 111101224567862221 111
Q ss_pred ccccccC-cCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCC
Q 048562 241 KILSFLD-SKETNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGES 319 (464)
Q Consensus 241 ~l~~~l~-~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 319 (464)
++.+.-. ..++.+.|+|++|.... ......+++++.+.. ++.++++.. .. ..+.+.+...+
T Consensus 145 eF~~~~~~~r~~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~----------~~----~~~~l~~~~~~- 206 (282)
T 3hbm_A 145 EFYQEAKENRKKKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSS----------NP----NLKKLQKFAKL- 206 (282)
T ss_dssp HHHHHTTCCCCCCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTT----------CT----THHHHHHHHHT-
T ss_pred HHHHhhhhccccCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCC----------ch----HHHHHHHHHhh-
Confidence 2111100 12235689999997643 235566788887654 566666655 11 22233332221
Q ss_pred CCcEEecCcccH-HHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEEeccc
Q 048562 320 KRGLIIRGWAPQ-LLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVGSV 391 (464)
Q Consensus 320 ~~nv~v~~~vpq-~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 391 (464)
.+|+.+..|+++ .+++..+++ +||+|| +|++|+++.|+|+|++|...+|..||+.+ ++.|++..+...
T Consensus 207 ~~~v~v~~~~~~m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~~~ 275 (282)
T 3hbm_A 207 HNNIRLFIDHENIAKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYKYL 275 (282)
T ss_dssp CSSEEEEESCSCHHHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECGGG
T ss_pred CCCEEEEeCHHHHHHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcchh
Confidence 358999999975 578888887 999999 89999999999999999999999999999 599999998653
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.52 E-value=3e-14 Score=129.92 Aligned_cols=135 Identities=13% Similarity=0.092 Sum_probs=95.8
Q ss_pred CCCcEEEEecCCCCCCCHHhHHHH-----HHHHhhCC-CceEEEEccCCCCCCCCcCCcccccCCchhHHHhh-------
Q 048562 250 ETNSVLYISFGSLARLSPEQLLEI-----AYGLEASN-HSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERM------- 316 (464)
Q Consensus 250 ~~~~~V~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~------- 316 (464)
.+++.|||+.||... -.+.+..+ +++|.+.+ .++++++|.. .. . ..+.+....
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~------~~---~----~~~~~~~~~~~~~~~~ 91 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRN------YS---S----EFEHLVQERGGQRESQ 91 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSS------SC---C----CCCSHHHHHTCEECSC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCC------ch---h----hHHHHHHhhhcccccc
Confidence 457799999999843 24343433 48887777 7999999876 10 0 011111000
Q ss_pred ------------------cCCCCcEEecCcccH-HHHhc-ccCceeeccccchhhHHHHHHcCCceeecccc----cccc
Q 048562 317 ------------------GESKRGLIIRGWAPQ-LLILE-HTAVGGFMTHCGWNSTLESVSAGVPMVTWPIT----AEQF 372 (464)
Q Consensus 317 ------------------~~~~~nv~v~~~vpq-~~lL~-~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~----~DQ~ 372 (464)
....-++.+.+|+++ .++++ .+++ +|||||.||++|++++|+|+|++|.. .||.
T Consensus 92 l~p~~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~ 169 (224)
T 2jzc_A 92 KIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQ 169 (224)
T ss_dssp CCSSCTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHH
T ss_pred ccccccccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHH
Confidence 000125678888876 58898 8888 99999999999999999999999974 3699
Q ss_pred hhHHHHHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHh
Q 048562 373 SNEKLISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLM 417 (464)
Q Consensus 373 ~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il 417 (464)
.||+++ ++.|+++.+ +++.|.++|.++.
T Consensus 170 ~nA~~l-~~~G~~~~~----------------~~~~L~~~i~~l~ 197 (224)
T 2jzc_A 170 QIADKF-VELGYVWSC----------------APTETGLIAGLRA 197 (224)
T ss_dssp HHHHHH-HHHSCCCEE----------------CSCTTTHHHHHHH
T ss_pred HHHHHH-HHCCCEEEc----------------CHHHHHHHHHHHH
Confidence 999999 599998655 3456777777763
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.49 E-value=1.8e-11 Score=123.66 Aligned_cols=377 Identities=11% Similarity=0.061 Sum_probs=189.1
Q ss_pred CCCcEEEEEcC-----------CCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCC
Q 048562 5 SSPVEMFFFPY-----------VGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPD 73 (464)
Q Consensus 5 ~~~~~vl~~~~-----------~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 73 (464)
.+||||+++.. ...|+-..+..+++.|.++||+|++++.......-... . ...++.++.++...
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~--~---~~~~v~v~~~~~~~ 92 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV--R---VAENLRVINIAAGP 92 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE--E---EETTEEEEEECCSC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc--c---ccCCeEEEEecCCC
Confidence 57899999985 24688889999999999999999999875432110000 0 01256666665321
Q ss_pred CCCCCCCCCcccHHHHHhhhHHHHHHh-hhhC-CCCEEEeCCCch--hhHHHHHHcCCCeEEEeccchHHHHHHHHHHhh
Q 048562 74 DIEIPDTDMSATPRTDTSMLQEPLKSL-LVDS-RPDCIVHDMFHH--WSADVINSMNIPRIVFNGNCCFSRCILENVRKY 149 (464)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~-~pD~Vi~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 149 (464)
........... ....+...+.+. ++.. +||+|++..... .+..+++.+++|+|...........
T Consensus 93 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~-------- 160 (438)
T 3c48_A 93 YEGLSKEELPT----QLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKN-------- 160 (438)
T ss_dssp SSSCCGGGGGG----GHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHS--------
T ss_pred ccccchhHHHH----HHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccccc--------
Confidence 10011101111 111122233333 4443 499999875433 3445677789999887544321110
Q ss_pred CCCCCCCCCCCceecCCCCCccccChhhhhhhccccEEEEcCccccChHHHHHHHhhhC--CCCeEEeCcccccccCcch
Q 048562 150 KPHEKVSSDYEPFVVPGLPDKIELTALSFRFEEKSFGIVVNSFYDLEPAYVEYFKQDLG--NDKAWFVGPVSLCNRNIED 227 (464)
Q Consensus 150 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~v~~vGp~~~~~~~~~~ 227 (464)
........+................+.+++.+- ...+.+...++ ..++..+.+......-. .
T Consensus 161 ----------~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~-----~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~-~ 224 (438)
T 3c48_A 161 ----------SYRDDSDTPESEARRICEQQLVDNADVLAVNTQ-----EEMQDLMHHYDADPDRISVVSPGADVELYS-P 224 (438)
T ss_dssp ----------CC----CCHHHHHHHHHHHHHHHHCSEEEESSH-----HHHHHHHHHHCCCGGGEEECCCCCCTTTSC-C
T ss_pred ----------ccccccCCcchHHHHHHHHHHHhcCCEEEEcCH-----HHHHHHHHHhCCChhheEEecCCccccccC-C
Confidence 000000000000000000122344566665442 22222222221 23455554322110000 0
Q ss_pred hhhcCCCCCCCccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhC-------CCceEEEEccCCCCCCCCcC
Q 048562 228 KAERGQKTSIDEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEAS-------NHSFIWVVGKIFQSPGTRKE 300 (464)
Q Consensus 228 ~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-------~~~~v~~~~~~~~~~~~~~~ 300 (464)
. .....+.+.+-+.-. ++..+++..|+... .+.+..+++++..+ +.++ +.+|..
T Consensus 225 -----~-~~~~~~~~r~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~p~~~~~l-~i~G~~--------- 285 (438)
T 3c48_A 225 -----G-NDRATERSRRELGIP-LHTKVVAFVGRLQP--FKGPQVLIKAVAALFDRDPDRNLRV-IICGGP--------- 285 (438)
T ss_dssp -----C-----CHHHHHHTTCC-SSSEEEEEESCBSG--GGCHHHHHHHHHHHHHHCTTCSEEE-EEECCB---------
T ss_pred -----c-ccchhhhhHHhcCCC-CCCcEEEEEeeecc--cCCHHHHHHHHHHHHhhCCCcceEE-EEEeCC---------
Confidence 0 000000122222211 23356677788753 23344455555432 2333 334431
Q ss_pred CcccccCCchhHHHhhcC--CCCcEEecCcccH---HHHhcccCceeeccc----cchhhHHHHHHcCCceeeccccccc
Q 048562 301 NGIEENWLPSGFEERMGE--SKRGLIIRGWAPQ---LLILEHTAVGGFMTH----CGWNSTLESVSAGVPMVTWPITAEQ 371 (464)
Q Consensus 301 ~~~~~~~lp~~~~~~~~~--~~~nv~v~~~vpq---~~lL~~~~~~~~ItH----GG~~s~~Eal~~GvP~v~~P~~~DQ 371 (464)
...+. ..+.+.+...+ ..++|.+.+|+|+ ..++..+++ +|.- |..+++.||+++|+|+|+.+.
T Consensus 286 -~~~g~-~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~---- 357 (438)
T 3c48_A 286 -SGPNA-TPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV---- 357 (438)
T ss_dssp -C-------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----
T ss_pred -CCCCc-HHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----
Confidence 00000 11222222211 1468999999976 456777887 5543 335789999999999999753
Q ss_pred chhHHHHHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Q 048562 372 FSNEKLISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDA 451 (464)
Q Consensus 372 ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~ 451 (464)
......+ +..+.|..++. -+.+++.++|.++++|++..+.+.+++++..+.+.- +. ....+
T Consensus 358 ~~~~e~i-~~~~~g~~~~~-------------~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s~--~~---~~~~~ 418 (438)
T 3c48_A 358 GGLPIAV-AEGETGLLVDG-------------HSPHAWADALATLLDDDETRIRMGEDAVEHARTFSW--AA---TAAQL 418 (438)
T ss_dssp TTHHHHS-CBTTTEEEESS-------------CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH--HH---HHHHH
T ss_pred CChhHHh-hCCCcEEECCC-------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCH--HH---HHHHH
Confidence 3455556 46668888865 378999999999999986666777777777666331 11 12334
Q ss_pred HHHHHHHHh
Q 048562 452 EALLQELKS 460 (464)
Q Consensus 452 ~~l~~~~~~ 460 (464)
.++++++..
T Consensus 419 ~~~~~~~~~ 427 (438)
T 3c48_A 419 SSLYNDAIA 427 (438)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 555555544
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.46 E-value=2.6e-11 Score=120.43 Aligned_cols=332 Identities=12% Similarity=0.051 Sum_probs=182.5
Q ss_pred CCCcEEEEEcC--C--CccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCC
Q 048562 5 SSPVEMFFFPY--V--GGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDT 80 (464)
Q Consensus 5 ~~~~~vl~~~~--~--~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (464)
|+|+||+++.. + ..|.-..+..+++.| +||+|++++............. ..++.+..++..
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-------- 66 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDK-----TLDYEVIRWPRS-------- 66 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHT-----TCSSEEEEESSS--------
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhcc-----ccceEEEEcccc--------
Confidence 45888999874 3 578888899999999 7999999998765432111100 235666666521
Q ss_pred CCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch--hhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCCCCC
Q 048562 81 DMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH--WSADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKVSSD 158 (464)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (464)
..... ......+.+++++.+||+|++..... ....+++.+++|.+++.........
T Consensus 67 ~~~~~-----~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----------------- 124 (394)
T 3okp_A 67 VMLPT-----PTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW----------------- 124 (394)
T ss_dssp SCCSC-----HHHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH-----------------
T ss_pred ccccc-----hhhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh-----------------
Confidence 11111 12356778888899999999865443 4566788899995554332211100
Q ss_pred CCceecCCCCCccccChhhh-hhhccccEEEEcCccccChHHHHHHHhhhC-CCCeEEeCcccccccCcchhhhcCCCCC
Q 048562 159 YEPFVVPGLPDKIELTALSF-RFEEKSFGIVVNSFYDLEPAYVEYFKQDLG-NDKAWFVGPVSLCNRNIEDKAERGQKTS 236 (464)
Q Consensus 159 ~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~v~~vGp~~~~~~~~~~~~~~~~~~~ 236 (464)
.. ....+..+ ......+.+++.+ ....+.+....+ ..++..+.+......-. . . ..
T Consensus 125 ------~~----~~~~~~~~~~~~~~~d~ii~~s-----~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~-~-----~-~~ 182 (394)
T 3okp_A 125 ------SM----LPGSRQSLRKIGTEVDVLTYIS-----QYTLRRFKSAFGSHPTFEHLPSGVDVKRFT-P-----A-TP 182 (394)
T ss_dssp ------TT----SHHHHHHHHHHHHHCSEEEESC-----HHHHHHHHHHHCSSSEEEECCCCBCTTTSC-C-----C-CH
T ss_pred ------hh----cchhhHHHHHHHHhCCEEEEcC-----HHHHHHHHHhcCCCCCeEEecCCcCHHHcC-C-----C-Cc
Confidence 00 00000001 2234455555544 222222333221 23555554322111000 0 0 00
Q ss_pred CCccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhC-----CCceEEEEccCCCCCCCCcCCcccccCCchh
Q 048562 237 IDEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEAS-----NHSFIWVVGKIFQSPGTRKENGIEENWLPSG 311 (464)
Q Consensus 237 ~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~ 311 (464)
....++.+.+.-. ++..+++..|+... ...+..+++++..+ +.+++++ |.. . ..+.
T Consensus 183 ~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g-----------~----~~~~ 243 (394)
T 3okp_A 183 EDKSATRKKLGFT-DTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLLIV-GSG-----------R----YEST 243 (394)
T ss_dssp HHHHHHHHHTTCC-TTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEEEE-CCC-----------T----THHH
T ss_pred hhhHHHHHhcCCC-cCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEEE-cCc-----------h----HHHH
Confidence 0112222222222 23366777788742 33344555555432 4455544 332 0 2222
Q ss_pred HHHhhcCCCCcEEecCcccHHH---HhcccCceeecc-----------ccchhhHHHHHHcCCceeecccccccchhHHH
Q 048562 312 FEERMGESKRGLIIRGWAPQLL---ILEHTAVGGFMT-----------HCGWNSTLESVSAGVPMVTWPITAEQFSNEKL 377 (464)
Q Consensus 312 ~~~~~~~~~~nv~v~~~vpq~~---lL~~~~~~~~It-----------HGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~ 377 (464)
+.+......+++.+.+|+|+.+ ++..+++ +|. -|..+++.||+++|+|+|+.+.. .....
T Consensus 244 l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~ 317 (394)
T 3okp_A 244 LRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG----GAPET 317 (394)
T ss_dssp HHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST----TGGGG
T ss_pred HHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCC----ChHHH
Confidence 2222221247899999997544 6677887 554 45567999999999999997643 23333
Q ss_pred HHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 048562 378 ISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGE 435 (464)
Q Consensus 378 v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~ 435 (464)
+ ..|.|..++.. +.+++.++|.++++|++..+.+.+++++..+
T Consensus 318 i--~~~~g~~~~~~-------------d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 360 (394)
T 3okp_A 318 V--TPATGLVVEGS-------------DVDKLSELLIELLDDPIRRAAMGAAGRAHVE 360 (394)
T ss_dssp C--CTTTEEECCTT-------------CHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred H--hcCCceEeCCC-------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 4 23378888653 7899999999999988666666666665544
No 27
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.42 E-value=1.9e-11 Score=122.09 Aligned_cols=330 Identities=12% Similarity=0.079 Sum_probs=174.1
Q ss_pred CCCcEEEEEcCC----CccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCC
Q 048562 5 SSPVEMFFFPYV----GGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDT 80 (464)
Q Consensus 5 ~~~~~vl~~~~~----~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (464)
.+||||+++... ..|+-..+..+++.|.++||+|++++.............. .+ .+..++..
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~---~~---~~~~~~~~-------- 83 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVS---GG---KAVPIPYN-------- 83 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEE---CC---CCC-------------
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCccccc---CC---cEEecccc--------
Confidence 368999999842 2667788999999999999999999986543211111000 00 11111100
Q ss_pred CCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch--hhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCCCCC
Q 048562 81 DMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH--WSADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKVSSD 158 (464)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (464)
.....+ .........+.+++++.+||+|++..... .+..+++..++|+|...............
T Consensus 84 ~~~~~~-~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~------------- 149 (406)
T 2gek_A 84 GSVARL-RFGPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSLTLSV------------- 149 (406)
T ss_dssp --------CCHHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSHHHHHH-------------
T ss_pred CCcccc-cccHHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhhhhHHH-------------
Confidence 000000 00011235677788888999999887554 34556777899999864331100000000
Q ss_pred CCceecCCCCCccccChhhhhhhccccEEEEcCccccChHHHHHHHhhhCCCCeEEeCcccccccCcchhhhcCCCCCCC
Q 048562 159 YEPFVVPGLPDKIELTALSFRFEEKSFGIVVNSFYDLEPAYVEYFKQDLGNDKAWFVGPVSLCNRNIEDKAERGQKTSID 238 (464)
Q Consensus 159 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~ 238 (464)
...... ......+.+++.+ ....+.+...++..++ .+.+..... . .. . .
T Consensus 150 -----------~~~~~~---~~~~~~d~ii~~s-----~~~~~~~~~~~~~~~~-vi~~~v~~~----~-~~-~-----~ 198 (406)
T 2gek_A 150 -----------FQGILR---PYHEKIIGRIAVS-----DLARRWQMEALGSDAV-EIPNGVDVA----S-FA-D-----A 198 (406)
T ss_dssp -----------HHSTTH---HHHTTCSEEEESS-----HHHHHHHHHHHSSCEE-ECCCCBCHH----H-HH-T-----C
T ss_pred -----------HHHHHH---HHHhhCCEEEECC-----HHHHHHHHHhcCCCcE-EecCCCChh----h-cC-C-----C
Confidence 000000 2234455555544 2222233333423444 444321100 0 00 0 0
Q ss_pred ccccccccCcCCCCcEEEEecCCC-CCCCHHhHHHHHHHHhhC-----CCceEEEEccCCCCCCCCcCCcccccCCchhH
Q 048562 239 EGKILSFLDSKETNSVLYISFGSL-ARLSPEQLLEIAYGLEAS-----NHSFIWVVGKIFQSPGTRKENGIEENWLPSGF 312 (464)
Q Consensus 239 ~~~l~~~l~~~~~~~~V~vs~GS~-~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~ 312 (464)
. .-..+ .. +..+++..|+. .. .+.+..+++++..+ +.++++ +|.. . . +.+
T Consensus 199 ~-~~~~~-~~---~~~~i~~~G~~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i-~G~~-----------~----~-~~l 254 (406)
T 2gek_A 199 P-LLDGY-PR---EGRTVLFLGRYDEP--RKGMAVLLAALPKLVARFPDVEILI-VGRG-----------D----E-DEL 254 (406)
T ss_dssp C-CCTTC-SC---SSCEEEEESCTTSG--GGCHHHHHHHHHHHHTTSTTCEEEE-ESCS-----------C----H-HHH
T ss_pred c-hhhhc-cC---CCeEEEEEeeeCcc--ccCHHHHHHHHHHHHHHCCCeEEEE-EcCC-----------c----H-HHH
Confidence 0 00001 10 12466667877 42 33344455555442 344433 3433 1 1 233
Q ss_pred HHhhcCCCCcEEecCcccH---HHHhcccCceeecc--ccc-hhhHHHHHHcCCceeecccccccchhHHHHHhhhcceE
Q 048562 313 EERMGESKRGLIIRGWAPQ---LLILEHTAVGGFMT--HCG-WNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGV 386 (464)
Q Consensus 313 ~~~~~~~~~nv~v~~~vpq---~~lL~~~~~~~~It--HGG-~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~ 386 (464)
.+.+.+..+++.+.+|+++ ..++..+++-++-+ +.| .+++.||+++|+|+|+.+. ......+ +..+.|.
T Consensus 255 ~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~~~~g~ 329 (406)
T 2gek_A 255 REQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVL-ADGDAGR 329 (406)
T ss_dssp HHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHH-TTTTSSE
T ss_pred HHHHHhccCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHh-cCCCceE
Confidence 3333222468999999986 46788888833322 334 3599999999999999765 4455666 4667888
Q ss_pred EeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 048562 387 KVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGE 435 (464)
Q Consensus 387 ~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~ 435 (464)
.++. -+.+++.++|.++++|++..+.+.+++++..+
T Consensus 330 ~~~~-------------~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 365 (406)
T 2gek_A 330 LVPV-------------DDADGMAAALIGILEDDQLRAGYVARASERVH 365 (406)
T ss_dssp ECCT-------------TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGG
T ss_pred EeCC-------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 8865 37899999999999987544455555555443
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.40 E-value=3.6e-11 Score=119.06 Aligned_cols=316 Identities=12% Similarity=0.059 Sum_probs=164.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEeCCcchhhhhhhhhhccCCCCCeEE-EEecCCCCCCCCCCCCc
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAH-GAKSTIITSPKHALSFQKSINRNQQSGLPITI-KTLHLPDDIEIPDTDMS 83 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~ 83 (464)
.|+||+++... .++......|+++|.++ ||+|.++++............. .++.+ ..++.. . ..
T Consensus 4 ~mmkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~------~--~~ 69 (376)
T 1v4v_A 4 GMKRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSL-----FGIQEDRNLDVM------Q--ER 69 (376)
T ss_dssp CCEEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHT-----TTCCCSEECCCC------S--SC
T ss_pred CceEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHH-----cCCCcccccccC------C--CC
Confidence 36899998853 33445567889999998 8998877654432222211111 12322 222211 1 01
Q ss_pred ccHHHHHhhhHHHHHHhhhhCCCCEEEeCC--Cch-hhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCCCCCCC
Q 048562 84 ATPRTDTSMLQEPLKSLLVDSRPDCIVHDM--FHH-WSADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKVSSDYE 160 (464)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~--~~~-~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (464)
.............+.+++++.+||+|++-. ... .+..+|+.+|+|++.+.... .
T Consensus 70 ~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~-----------------------~ 126 (376)
T 1v4v_A 70 QALPDLAARILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGL-----------------------R 126 (376)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCC-----------------------C
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCC-----------------------c
Confidence 111122222346677888899999999932 222 34667888999987552210 0
Q ss_pred ceecCCCCCccccChhhhh-hh-ccccEEEEcCccccChHHHHHHHh-hhCCCCeEEeCcccccccCcchhhhcCCCCCC
Q 048562 161 PFVVPGLPDKIELTALSFR-FE-EKSFGIVVNSFYDLEPAYVEYFKQ-DLGNDKAWFVGPVSLCNRNIEDKAERGQKTSI 237 (464)
Q Consensus 161 ~~~~p~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~ 237 (464)
.. ... ..+...... .. ...+.+++.+ ....+.+.. ...+.++..+|......... . .
T Consensus 127 ~~--~~~---~~~~~~~~~~~~~~~~~~~~~~s-----~~~~~~l~~~g~~~~ki~vi~n~~~d~~~~-~-~-------- 186 (376)
T 1v4v_A 127 SG--NLK---EPFPEEANRRLTDVLTDLDFAPT-----PLAKANLLKEGKREEGILVTGQTGVDAVLL-A-A-------- 186 (376)
T ss_dssp CS--CTT---SSTTHHHHHHHHHHHCSEEEESS-----HHHHHHHHTTTCCGGGEEECCCHHHHHHHH-H-H--------
T ss_pred cc--ccc---CCCchHHHHHHHHHHhceeeCCC-----HHHHHHHHHcCCCcceEEEECCchHHHHhh-h-h--------
Confidence 00 000 000010011 11 1233344332 111122222 11123577777421110000 0 0
Q ss_pred CccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhC-----CCceEEEEccCCCCCCCCcCCcccccCCchhH
Q 048562 238 DEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEAS-----NHSFIWVVGKIFQSPGTRKENGIEENWLPSGF 312 (464)
Q Consensus 238 ~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~ 312 (464)
..+++.+.++ +++.|+++.|..... ..+..+++|+..+ +.++++..+.. .. +-+.+
T Consensus 187 ~~~~~~~~~~---~~~~vl~~~gr~~~~--k~~~~ll~a~~~l~~~~~~~~lv~~~g~~----------~~----~~~~l 247 (376)
T 1v4v_A 187 KLGRLPEGLP---EGPYVTVTMHRRENW--PLLSDLAQALKRVAEAFPHLTFVYPVHLN----------PV----VREAV 247 (376)
T ss_dssp HHCCCCTTCC---SSCEEEECCCCGGGG--GGHHHHHHHHHHHHHHCTTSEEEEECCSC----------HH----HHHHH
T ss_pred hhhHHHHhcC---CCCEEEEEeCcccch--HHHHHHHHHHHHHHhhCCCeEEEEECCCC----------HH----HHHHH
Confidence 0011112222 345777777755321 1355566666542 45555554533 11 11122
Q ss_pred HHhhcCCCCcEEecCcccH---HHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEEec
Q 048562 313 EERMGESKRGLIIRGWAPQ---LLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVG 389 (464)
Q Consensus 313 ~~~~~~~~~nv~v~~~vpq---~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~ 389 (464)
.+.... .+++.+.+++++ .+++..+++ ||+++| |.+.||+++|+|+|+.+..+++.. +. +.|.|..++
T Consensus 248 ~~~~~~-~~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~-~~g~g~lv~ 318 (376)
T 1v4v_A 248 FPVLKG-VRNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GL-KAGILKLAG 318 (376)
T ss_dssp HHHHTT-CTTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HH-HHTSEEECC
T ss_pred HHHhcc-CCCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hh-cCCceEECC
Confidence 222221 358888866554 578888887 888884 446699999999999876666555 33 667887762
Q ss_pred cccccCCCCCCCCccChHHHHHHHHHHhcCC
Q 048562 390 SVNWVSWSTEPSAAVGRDKVEVAVKRLMGTG 420 (464)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~ 420 (464)
.++++|.++|.++++|+
T Consensus 319 --------------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 319 --------------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp --------------SCHHHHHHHHHHHHTCH
T ss_pred --------------CCHHHHHHHHHHHHhCh
Confidence 37899999999999986
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.32 E-value=5.3e-11 Score=119.13 Aligned_cols=328 Identities=10% Similarity=0.056 Sum_probs=171.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEeCCcchhhhhhhhhhccCCCCCeEE-EEecCCCCCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH-GAKSTIITSPKHALSFQKSINRNQQSGLPITI-KTLHLPDDIEIPDTDM 82 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 82 (464)
++|+||+++. ++.....-+..|.++|.++ |+++.++.+....+........ .++.. +.+. ... .
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~-----~~i~~~~~l~------~~~--~ 88 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLEL-----FSITPDFDLN------IME--P 88 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHH-----TTCCCSEECC------CCC--T
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh-----cCCCCceeee------cCC--C
Confidence 5678888777 4777888889999999998 7888655543332211111110 12210 1111 100 1
Q ss_pred cccHHHHHhhhHHHHHHhhhhCCCCEEEeCC-C-c-hhhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCCCCCC
Q 048562 83 SATPRTDTSMLQEPLKSLLVDSRPDCIVHDM-F-H-HWSADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKVSSDY 159 (464)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~-~-~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (464)
.......+......+.+++++.+||+|++-. . . ..+..+|+.+|||++.+....
T Consensus 89 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~----------------------- 145 (396)
T 3dzc_A 89 GQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL----------------------- 145 (396)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC-----------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-----------------------
Confidence 1233334455678888999999999999833 2 2 235678889999987652210
Q ss_pred CceecCCCCCccccChhhhhhh--ccccEEEEcCccccChHHHHHHH-hhhCCCCeEEeCcccccccCcc-hhhhcCCCC
Q 048562 160 EPFVVPGLPDKIELTALSFRFE--EKSFGIVVNSFYDLEPAYVEYFK-QDLGNDKAWFVGPVSLCNRNIE-DKAERGQKT 235 (464)
Q Consensus 160 ~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~v~~vGp~~~~~~~~~-~~~~~~~~~ 235 (464)
... .....+.....+.+ ...+.+++.+ ....+.+. ....+.+++.+|....+..... ..... .
T Consensus 146 rs~-----~~~~~~~~~~~r~~~~~~a~~~~~~s-----e~~~~~l~~~G~~~~ki~vvGn~~~d~~~~~~~~~~~---~ 212 (396)
T 3dzc_A 146 RTG-----NIYSPWPEEGNRKLTAALTQYHFAPT-----DTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHT---D 212 (396)
T ss_dssp CCS-----CTTSSTTHHHHHHHHHHTCSEEEESS-----HHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHH---C
T ss_pred ccc-----ccccCCcHHHHHHHHHHhcCEEECCC-----HHHHHHHHHcCCCcCcEEEECCcHHHHHHHhhhhccc---c
Confidence 000 00000111111111 1233334333 11122222 2221246888884221100000 00000 0
Q ss_pred CCCccccccccCc-CCCCcEEEEecCCCCCCCHHhHHHHHHHHhhC-----CCceEEEEccCCCCCCCCcCCcccccCCc
Q 048562 236 SIDEGKILSFLDS-KETNSVLYISFGSLARLSPEQLLEIAYGLEAS-----NHSFIWVVGKIFQSPGTRKENGIEENWLP 309 (464)
Q Consensus 236 ~~~~~~l~~~l~~-~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~lp 309 (464)
....+++.+.++. .+++++|+++.+-..+... .+..+++|+..+ +.++|+.++.+ .. +-
T Consensus 213 ~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~----------~~----~~ 277 (396)
T 3dzc_A 213 MDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLN----------PN----VR 277 (396)
T ss_dssp HHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBC----------HH----HH
T ss_pred hhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCC----------hH----HH
Confidence 0000222333331 1235677776532222222 255666666543 45666655432 11 11
Q ss_pred hhHHHhhcCCCCcEEecCccc---HHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceE
Q 048562 310 SGFEERMGESKRGLIIRGWAP---QLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGV 386 (464)
Q Consensus 310 ~~~~~~~~~~~~nv~v~~~vp---q~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~ 386 (464)
+.+.+... ..+++.+.++++ ...++..+++ +|+-.| |.+.||.++|+|+|+..-..+++ .++ +.|.++
T Consensus 278 ~~l~~~~~-~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v-~~G~~~ 348 (396)
T 3dzc_A 278 EPVNKLLK-GVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAV-AAGTVK 348 (396)
T ss_dssp HHHHHHTT-TCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHH-HHTSEE
T ss_pred HHHHHHHc-CCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHH-HcCceE
Confidence 11222111 146888877764 4567788887 999887 55579999999999986555543 243 678775
Q ss_pred EeccccccCCCCCCCCccChHHHHHHHHHHhcCC
Q 048562 387 KVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTG 420 (464)
Q Consensus 387 ~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~ 420 (464)
.+. .++++|.+++.++++|+
T Consensus 349 lv~--------------~d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 349 LVG--------------TNQQQICDALSLLLTDP 368 (396)
T ss_dssp ECT--------------TCHHHHHHHHHHHHHCH
T ss_pred EcC--------------CCHHHHHHHHHHHHcCH
Confidence 552 36899999999999987
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.31 E-value=6.2e-10 Score=114.64 Aligned_cols=367 Identities=13% Similarity=0.081 Sum_probs=183.4
Q ss_pred CCCCCCCcEEEEEcCC---------------CccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhh---hhhccCCCC
Q 048562 1 MDSKSSPVEMFFFPYV---------------GGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKS---INRNQQSGL 62 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~---------------~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~---~~~~~~~g~ 62 (464)
|..+.++|||+++... ..|.-..+..+++.|.++||+|++++........... ... .....
T Consensus 1 m~~m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~-~~~~~ 79 (499)
T 2r60_A 1 MVEMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDY-YQETN 79 (499)
T ss_dssp ------CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEE-CTTCS
T ss_pred CccccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHh-ccCCC
Confidence 5654456899999852 4677788999999999999999999865332110000 000 00012
Q ss_pred CeEEEEecCCCCCCCCCCCCcccHHHHHhhhHHHHHHhhhh--CCCCEEEeCCCch--hhHHHHHHcCCCeEEEeccchH
Q 048562 63 PITIKTLHLPDDIEIPDTDMSATPRTDTSMLQEPLKSLLVD--SRPDCIVHDMFHH--WSADVINSMNIPRIVFNGNCCF 138 (464)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~D~~~~--~~~~~A~~~giP~v~~~~~~~~ 138 (464)
++.++.++............. .........+.+++++ .+||+|.+-.... .+..+++.+|+|+|........
T Consensus 80 gv~v~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~~ 155 (499)
T 2r60_A 80 KVRIVRIPFGGDKFLPKEELW----PYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGA 155 (499)
T ss_dssp SEEEEEECCSCSSCCCGGGCG----GGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCHH
T ss_pred CeEEEEecCCCcCCcCHHHHH----HHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCccc
Confidence 577777653211001100111 1111223456667776 5899999875432 3445677889999876444322
Q ss_pred HHHHHHHHHhhCCCCCCCCCCCceecCCCC-Ccc----ccChh-h--hhhhccccEEEEcCccccChHHHHHHHhh--hC
Q 048562 139 SRCILENVRKYKPHEKVSSDYEPFVVPGLP-DKI----ELTAL-S--FRFEEKSFGIVVNSFYDLEPAYVEYFKQD--LG 208 (464)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~----~~~~~-~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~ 208 (464)
... .. ....+.. ... .+... . .......+.+++.+- ...+.+... ++
T Consensus 156 ~~~-----~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~-----~~~~~~~~~~~~g 212 (499)
T 2r60_A 156 QKM-----EK-------------LNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTS-----QERFGQYSHDLYR 212 (499)
T ss_dssp HHH-----HT-------------TCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSH-----HHHHHTTTSGGGT
T ss_pred ccc-----hh-------------hccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCH-----HHHHHHHhhhccc
Confidence 110 00 0000000 000 00000 0 122344566665441 111222222 20
Q ss_pred -------CCCeEEeCcccccccCcchhhhcCCCCCCC---ccccccccC-----cCCCCcEEEEecCCCCCCCHHhHHHH
Q 048562 209 -------NDKAWFVGPVSLCNRNIEDKAERGQKTSID---EGKILSFLD-----SKETNSVLYISFGSLARLSPEQLLEI 273 (464)
Q Consensus 209 -------~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~---~~~l~~~l~-----~~~~~~~V~vs~GS~~~~~~~~~~~~ 273 (464)
..++..+..-..... .. +... ...+.+-++ .. ++..+++..|.+. ....+..+
T Consensus 213 ~~~~~~~~~ki~vi~ngvd~~~-~~--------~~~~~~~~~~~r~~~~~~~~~~~-~~~~~i~~vGrl~--~~Kg~~~l 280 (499)
T 2r60_A 213 GAVNVEDDDKFSVIPPGVNTRV-FD--------GEYGDKIKAKITKYLERDLGSER-MELPAIIASSRLD--QKKNHYGL 280 (499)
T ss_dssp TTCCTTCGGGEEECCCCBCTTT-SS--------SCCCHHHHHHHHHHHHHHSCGGG-TTSCEEEECSCCC--GGGCHHHH
T ss_pred ccccccCCCCeEEECCCcChhh-cC--------ccchhhhHHHHHHHhcccccccC-CCCcEEEEeecCc--cccCHHHH
Confidence 124444432111100 00 0000 011111111 11 1225566778775 34457777
Q ss_pred HHHHhhCCC-----ceEEEEccCCCCCCCCcCCcccc--cCC-------chhHHHhhcC--CCCcEEecCcccHH---HH
Q 048562 274 AYGLEASNH-----SFIWVVGKIFQSPGTRKENGIEE--NWL-------PSGFEERMGE--SKRGLIIRGWAPQL---LI 334 (464)
Q Consensus 274 ~~al~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~--~~l-------p~~~~~~~~~--~~~nv~v~~~vpq~---~l 334 (464)
++|+..+.. ..++.+|.. . +... ..+ -+.+.+.+.+ ..++|...+++|+. .+
T Consensus 281 i~a~~~l~~~~~~~~~l~i~G~~------~---~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~ 351 (499)
T 2r60_A 281 VEAYVQNKELQDKANLVLTLRGI------E---NPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGC 351 (499)
T ss_dssp HHHHHTCHHHHHHCEEEEEESSC------S---BTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHH
T ss_pred HHHHHHHHHhCCCceEEEEECCC------C---CcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHH
Confidence 788776532 235555552 0 0000 001 1122222211 14679999999754 46
Q ss_pred hccc----Cceeeccc----cchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEEeccccccCCCCCCCCccCh
Q 048562 335 LEHT----AVGGFMTH----CGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVGSVNWVSWSTEPSAAVGR 406 (464)
Q Consensus 335 L~~~----~~~~~ItH----GG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~ 406 (464)
+..+ ++ +|.- |-..++.||+++|+|+|+... ......+ +.-..|..++.. +.
T Consensus 352 ~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~~~~-------------d~ 411 (499)
T 2r60_A 352 YAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLVDPE-------------DP 411 (499)
T ss_dssp HHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEECTT-------------CH
T ss_pred HHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEeCCC-------------CH
Confidence 6667 77 5522 334689999999999998753 3445555 455578888653 88
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 048562 407 DKVEVAVKRLMGTGEEAAEMRRRAGELGEK 436 (464)
Q Consensus 407 ~~l~~ai~~il~~~~~~~~~~~~a~~l~~~ 436 (464)
+++.++|.++++|++..+.+.+++++..+.
T Consensus 412 ~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 412 EDIARGLLKAFESEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 999999999999876555666666554443
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.30 E-value=1.5e-10 Score=114.79 Aligned_cols=327 Identities=11% Similarity=0.090 Sum_probs=167.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCC-cEEEEeCCcchhhhhhhhhhccCCCCCeEE-EEecCCCCCCCCCCCCccc
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGA-KSTIITSPKHALSFQKSINRNQQSGLPITI-KTLHLPDDIEIPDTDMSAT 85 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh-~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 85 (464)
|||++++. ..++...+..|+++|.++|+ ++.++.+............. .++.+ ..++.. . ....
T Consensus 1 mkIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~------~--~~~~ 66 (384)
T 1vgv_A 1 MKVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKL-----FSIVPDYDLNIM------Q--PGQG 66 (384)
T ss_dssp CEEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHH-----HTCCCSEECCCC------S--TTSC
T ss_pred CeEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHH-----cCCCCCcceecC------C--CCcc
Confidence 57888764 46778888999999999994 77665433221111111110 12222 232211 1 0112
Q ss_pred HHHHHhhhHHHHHHhhhhCCCCEEEeCCC--ch-hhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCCCCCCCce
Q 048562 86 PRTDTSMLQEPLKSLLVDSRPDCIVHDMF--HH-WSADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKVSSDYEPF 162 (464)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~--~~-~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (464)
...........+.+++++.+||+|++-.. .. .+..+|+.+|+|++.+.... ...
T Consensus 67 ~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~-----------------------~~~ 123 (384)
T 1vgv_A 67 LTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGL-----------------------RTG 123 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCC-----------------------CCS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-----------------------ccc
Confidence 22222234567888899999999998532 22 34567788899998763220 000
Q ss_pred ecCCCCCccccChhhhhh--hccccEEEEcCccccChHHHHHHHh-hhCCCCeEEeCcccccccCcchhhhcCCCCCCCc
Q 048562 163 VVPGLPDKIELTALSFRF--EEKSFGIVVNSFYDLEPAYVEYFKQ-DLGNDKAWFVGPVSLCNRNIEDKAERGQKTSIDE 239 (464)
Q Consensus 163 ~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~ 239 (464)
... ..+.....+. ....+.+++.+ +...+.+.. .....++..+|....+.... . ...........
T Consensus 124 --~~~---~~~~~~~~~~~~~~~~d~ii~~s-----~~~~~~l~~~g~~~~~i~vi~n~~~d~~~~-~-~~~~~~~~~~~ 191 (384)
T 1vgv_A 124 --DLY---SPWPEEANRTLTGHLAMYHFSPT-----ETSRQNLLRENVADSRIFITGNTVIDALLW-V-RDQVMSSDKLR 191 (384)
T ss_dssp --CTT---SSTTHHHHHHHHHTTCSEEEESS-----HHHHHHHHHTTCCGGGEEECCCHHHHHHHH-H-HHHTTTCHHHH
T ss_pred --ccc---CCCchHhhHHHHHhhccEEEcCc-----HHHHHHHHHcCCChhhEEEeCChHHHHHHh-h-hhccccchhhh
Confidence 000 0011111111 12244555433 111122221 11123466676321110000 0 00000000000
Q ss_pred cccccccC-cCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhC-----CCceEEEEccCCCCCCCCcCCcccccCCchhHH
Q 048562 240 GKILSFLD-SKETNSVLYISFGSLARLSPEQLLEIAYGLEAS-----NHSFIWVVGKIFQSPGTRKENGIEENWLPSGFE 313 (464)
Q Consensus 240 ~~l~~~l~-~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~ 313 (464)
+++.+.+. -.++++.|+++.|...... +.+..+++|+..+ +.++++..+.. .. +-+.+.
T Consensus 192 ~~~~~~~~~~~~~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~----------~~----~~~~l~ 256 (384)
T 1vgv_A 192 SELAANYPFIDPDKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN----------PN----VREPVN 256 (384)
T ss_dssp HHHHTTCTTCCTTSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC----------HH----HHHHHH
T ss_pred HHHHHhccccCCCCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC----------HH----HHHHHH
Confidence 12223222 1123567888888765322 2345555555442 44555543322 01 111222
Q ss_pred HhhcCCCCcEEecCccc---HHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEEecc
Q 048562 314 ERMGESKRGLIIRGWAP---QLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVGS 390 (464)
Q Consensus 314 ~~~~~~~~nv~v~~~vp---q~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~ 390 (464)
+.... .++|.+.++++ ..+++..+++ ||+.+|. .+.||+++|+|+|+.+..++. ..+. +.|.|..++
T Consensus 257 ~~~~~-~~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~----~e~v-~~g~g~lv~- 326 (384)
T 1vgv_A 257 RILGH-VKNVILIDPQEYLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTER----PEAV-TAGTVRLVG- 326 (384)
T ss_dssp HHHTT-CTTEEEECCCCHHHHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSC----HHHH-HHTSEEEEC-
T ss_pred HHhhc-CCCEEEeCCCCHHHHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCc----chhh-hCCceEEeC-
Confidence 22211 35888866665 4567888888 8888754 488999999999999874433 3343 667888873
Q ss_pred ccccCCCCCCCCccChHHHHHHHHHHhcCCh
Q 048562 391 VNWVSWSTEPSAAVGRDKVEVAVKRLMGTGE 421 (464)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~ 421 (464)
. +.++|.++|.++++|++
T Consensus 327 ------------~-d~~~la~~i~~ll~d~~ 344 (384)
T 1vgv_A 327 ------------T-DKQRIVEEVTRLLKDEN 344 (384)
T ss_dssp ------------S-SHHHHHHHHHHHHHCHH
T ss_pred ------------C-CHHHHHHHHHHHHhChH
Confidence 2 78999999999999874
No 32
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.29 E-value=1.1e-09 Score=110.06 Aligned_cols=96 Identities=9% Similarity=0.080 Sum_probs=69.8
Q ss_pred CCcEEecCcccHHH---HhcccCceeecc----ccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEEecccc
Q 048562 320 KRGLIIRGWAPQLL---ILEHTAVGGFMT----HCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVGSVN 392 (464)
Q Consensus 320 ~~nv~v~~~vpq~~---lL~~~~~~~~It----HGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 392 (464)
+.++...+|+++.+ ++..+++ +|. -|-.+++.||+++|+|+|+... ......+ ..|.|..++..
T Consensus 310 ~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~--~~~~g~~~~~~- 380 (439)
T 3fro_A 310 GNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII--TNETGILVKAG- 380 (439)
T ss_dssp TTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC--CTTTCEEECTT-
T ss_pred CCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE--EcCceEEeCCC-
Confidence 55566788898754 5677777 552 2335799999999999999643 3344444 45689888653
Q ss_pred ccCCCCCCCCccChHHHHHHHHHHhc-CChHHHHHHHHHHHHHHH
Q 048562 393 WVSWSTEPSAAVGRDKVEVAVKRLMG-TGEEAAEMRRRAGELGEK 436 (464)
Q Consensus 393 ~~~~~~~~~~~~~~~~l~~ai~~il~-~~~~~~~~~~~a~~l~~~ 436 (464)
+.+++.++|.++++ |++..+.+.+++++..+.
T Consensus 381 ------------d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~ 413 (439)
T 3fro_A 381 ------------DPGELANAILKALELSRSDLSKFRENCKKRAMS 413 (439)
T ss_dssp ------------CHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT
T ss_pred ------------CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh
Confidence 88999999999999 886666777777666543
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.28 E-value=2.4e-11 Score=121.87 Aligned_cols=321 Identities=10% Similarity=0.035 Sum_probs=167.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcchhhhhhhhhhccCCCCCeEE-EEecCCCCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKHALSFQKSINRNQQSGLPITI-KTLHLPDDIEIPDTD 81 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~ 81 (464)
|+|+||+++.. +.....-+..|.++|.++ |+++.++.+....+....... ..++.. +.+. ...
T Consensus 25 m~~~kI~~v~G-tr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~-----~~~i~~~~~l~------v~~-- 90 (403)
T 3ot5_A 25 MAKIKVMSIFG-TRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLE-----IFDIKPDIDLD------IMK-- 90 (403)
T ss_dssp -CCEEEEEEEC-SHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHH-----HTTCCCSEECC------CCC--
T ss_pred cccceEEEEEe-cChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHH-----hcCCCCCcccc------cCC--
Confidence 56678888774 777778889999999998 688775544422111111111 012211 1111 110
Q ss_pred CcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCC--ch-hhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCCCCC
Q 048562 82 MSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMF--HH-WSADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKVSSD 158 (464)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~--~~-~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (464)
........+......+.+++++.+||+|++-.- .. .+..+|+.+|||++.+....
T Consensus 91 ~~~~~~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl---------------------- 148 (403)
T 3ot5_A 91 KGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL---------------------- 148 (403)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC----------------------
T ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc----------------------
Confidence 111333334456778889999999999998432 22 35678899999987652210
Q ss_pred CCceecCCCCCccccChhhhhh-hcc-ccEEEEcCccccChHHHHHHHh-hhCCCCeEEeCcccccccCcchhhhcCCCC
Q 048562 159 YEPFVVPGLPDKIELTALSFRF-EEK-SFGIVVNSFYDLEPAYVEYFKQ-DLGNDKAWFVGPVSLCNRNIEDKAERGQKT 235 (464)
Q Consensus 159 ~~~~~~p~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~l~~~~~~~~~~-~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~ 235 (464)
.. ......++....+. ..+ .+.+++.+ +...+.+.. ...+.+++.+|....+... .....
T Consensus 149 -rs-----~~~~~~~p~~~~r~~~~~~a~~~~~~s-----e~~~~~l~~~Gi~~~~i~vvGn~~~D~~~-----~~~~~- 211 (403)
T 3ot5_A 149 -RT-----WNKYSPFPEEMNRQLTGVMADIHFSPT-----KQAKENLLAEGKDPATIFVTGNTAIDALK-----TTVQK- 211 (403)
T ss_dssp -CC-----SCTTSSTTHHHHHHHHHHHCSEEEESS-----HHHHHHHHHTTCCGGGEEECCCHHHHHHH-----HHSCT-
T ss_pred -cc-----cccccCCcHHHHHHHHHHhcCEEECCC-----HHHHHHHHHcCCCcccEEEeCCchHHHHH-----hhhhh-
Confidence 00 00000011110111 111 23333322 222222222 2213468888843221100 00000
Q ss_pred CCCccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhh-----CCCceEEEEccCCCCCCCCcCCcccccCCch
Q 048562 236 SIDEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEA-----SNHSFIWVVGKIFQSPGTRKENGIEENWLPS 310 (464)
Q Consensus 236 ~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~ 310 (464)
....+...++ .++++++++.|...... +.+..+++|+.. .+.++|+..+.+ .. +-+
T Consensus 212 ~~~~~~~~~l----~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~----------~~----~~~ 272 (403)
T 3ot5_A 212 DYHHPILENL----GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLN----------PA----VRE 272 (403)
T ss_dssp TCCCHHHHSC----TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSC----------HH----HHH
T ss_pred hcchHHHHhc----cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCC----------HH----HHH
Confidence 0001112222 24557777765422111 124555555543 244666665432 11 111
Q ss_pred hHHHhhcCCCCcEEecCccc---HHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEE
Q 048562 311 GFEERMGESKRGLIIRGWAP---QLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVK 387 (464)
Q Consensus 311 ~~~~~~~~~~~nv~v~~~vp---q~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~ 387 (464)
.+.+... ..+++.+.++++ ...++.++++ +|+..|..+ .||..+|+|+|++|-.++++. ++ +.|.|+.
T Consensus 273 ~l~~~~~-~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v-~~g~~~l 343 (403)
T 3ot5_A 273 KAMAILG-GHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GI-EAGTLKL 343 (403)
T ss_dssp HHHHHHT-TCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HH-HHTSEEE
T ss_pred HHHHHhC-CCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh----he-eCCcEEE
Confidence 1111111 146899988886 4567777887 898875433 799999999999976666553 33 6788877
Q ss_pred eccccccCCCCCCCCccChHHHHHHHHHHhcCC
Q 048562 388 VGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTG 420 (464)
Q Consensus 388 l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~ 420 (464)
+. .++++|.+++.++++|+
T Consensus 344 v~--------------~d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 344 IG--------------TNKENLIKEALDLLDNK 362 (403)
T ss_dssp CC--------------SCHHHHHHHHHHHHHCH
T ss_pred cC--------------CCHHHHHHHHHHHHcCH
Confidence 62 37899999999999987
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.25 E-value=1.8e-09 Score=107.43 Aligned_cols=332 Identities=12% Similarity=0.035 Sum_probs=173.2
Q ss_pred CcEEEEEcCC-CccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCccc
Q 048562 7 PVEMFFFPYV-GGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSAT 85 (464)
Q Consensus 7 ~~~vl~~~~~-~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (464)
+.++....+| ..|.-.-+..|+++|.++||+|++++....... ... ..++.+..++.+. + +..... .
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~~~-------~~~i~~~~~~~~~-~--~~~~~~-~ 82 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL-NKV-------YPNIYFHEVTVNQ-Y--SVFQYP-P 82 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----CC-------CTTEEEECCCCC-------CCSC-C
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc-ccc-------CCceEEEeccccc-c--cccccc-c
Confidence 4567777777 566777888999999999999999987532111 111 1245555543210 0 000000 0
Q ss_pred HHHHHhhhHHHHHHhhhhCCCCEEEeCCCch--hhHHHHHH-c--CCCeEEEeccchHHHHHHHHHHhhCCCCCCCCCCC
Q 048562 86 PRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH--WSADVINS-M--NIPRIVFNGNCCFSRCILENVRKYKPHEKVSSDYE 160 (464)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~--~~~~~A~~-~--giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (464)
.. ......+.+++++.+||+|++..... ....++.. + ++|+|.......... .
T Consensus 83 -~~--~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-------------------~ 140 (394)
T 2jjm_A 83 -YD--LALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV-------------------L 140 (394)
T ss_dssp -HH--HHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT-------------------T
T ss_pred -cc--HHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccc-------------------c
Confidence 11 12345677788889999999975433 23334443 3 599887643311100 0
Q ss_pred ceecCCCCCccccChhhh-hhhccccEEEEcCccccChHHHHHHHhhhC-CCCeEEeCcccccccCcchhhhcCCCCCCC
Q 048562 161 PFVVPGLPDKIELTALSF-RFEEKSFGIVVNSFYDLEPAYVEYFKQDLG-NDKAWFVGPVSLCNRNIEDKAERGQKTSID 238 (464)
Q Consensus 161 ~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~ 238 (464)
+... ...... ......+.+++.+ ....+......+ ..++..+........-. ...
T Consensus 141 -----~~~~---~~~~~~~~~~~~ad~ii~~s-----~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~----------~~~ 197 (394)
T 2jjm_A 141 -----GSDP---SLNNLIRFGIEQSDVVTAVS-----HSLINETHELVKPNKDIQTVYNFIDERVYF----------KRD 197 (394)
T ss_dssp -----TTCT---TTHHHHHHHHHHSSEEEESC-----HHHHHHHHHHTCCSSCEEECCCCCCTTTCC----------CCC
T ss_pred -----CCCH---HHHHHHHHHHhhCCEEEECC-----HHHHHHHHHhhCCcccEEEecCCccHHhcC----------Ccc
Confidence 0000 001101 2234455666544 222223333331 13555554322111000 001
Q ss_pred ccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhh----CCCceEEEEccCCCCCCCCcCCcccccCCchhHHH
Q 048562 239 EGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEA----SNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEE 314 (464)
Q Consensus 239 ~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~ 314 (464)
.+++.+-+... ++..+++..|.... ...+..+++|+.. .+.++++ +|.. . ..+.+.+
T Consensus 198 ~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i-~G~g-----------~----~~~~l~~ 258 (394)
T 2jjm_A 198 MTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKLLL-VGDG-----------P----EFCTILQ 258 (394)
T ss_dssp CHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEEEE-ECCC-----------T----THHHHHH
T ss_pred hHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEEEE-ECCc-----------h----HHHHHHH
Confidence 11122222211 22355666787753 3334455555544 2444443 4433 0 1122322
Q ss_pred hhcCC--CCcEEecCccc-HHHHhcccCceeec----cccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEE
Q 048562 315 RMGES--KRGLIIRGWAP-QLLILEHTAVGGFM----THCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVK 387 (464)
Q Consensus 315 ~~~~~--~~nv~v~~~vp-q~~lL~~~~~~~~I----tHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~ 387 (464)
.+.+. .++|.+.++.. -..++..+++ +| .-|..+++.||+++|+|+|+.+.. .....+ +..+.|..
T Consensus 259 ~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v-~~~~~g~~ 331 (394)
T 2jjm_A 259 LVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVI-QHGDTGYL 331 (394)
T ss_dssp HHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTC-CBTTTEEE
T ss_pred HHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHh-hcCCceEE
Confidence 22211 35777777654 4678888887 66 456678999999999999997653 233344 35567888
Q ss_pred eccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 048562 388 VGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELG 434 (464)
Q Consensus 388 l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~ 434 (464)
++.. +.+++.++|.++++|++..+.+.+++++..
T Consensus 332 ~~~~-------------d~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 332 CEVG-------------DTTGVADQAIQLLKDEELHRNMGERARESV 365 (394)
T ss_dssp ECTT-------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred eCCC-------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 8653 789999999999998755556666666554
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.11 E-value=2.8e-08 Score=97.74 Aligned_cols=147 Identities=14% Similarity=0.198 Sum_probs=98.0
Q ss_pred cEEEEecCCCCCCCHHhHHHHHHHHhhCCCc-----eEEEEccCCCCCCCCcCCcccccCCchhHHHhhcC--CCCcEEe
Q 048562 253 SVLYISFGSLARLSPEQLLEIAYGLEASNHS-----FIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGE--SKRGLII 325 (464)
Q Consensus 253 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~--~~~nv~v 325 (464)
..+++..|+... ...+..+++++..+..+ -++.+|.. . .+.+.+...+ ..+++.+
T Consensus 196 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g-----------~-----~~~~~~~~~~~~~~~~v~~ 257 (374)
T 2iw1_A 196 QNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQD-----------K-----PRKFEALAEKLGVRSNVHF 257 (374)
T ss_dssp CEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSS-----------C-----CHHHHHHHHHHTCGGGEEE
T ss_pred CeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCC-----------C-----HHHHHHHHHHcCCCCcEEE
Confidence 467777787653 34566677777765322 33444443 1 1122221110 1468888
Q ss_pred cCccc-HHHHhcccCceeecc----ccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEEeccccccCCCCCC
Q 048562 326 RGWAP-QLLILEHTAVGGFMT----HCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVGSVNWVSWSTEP 400 (464)
Q Consensus 326 ~~~vp-q~~lL~~~~~~~~It----HGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~ 400 (464)
.++.. -.+++..+++ +|. -|..+++.||+++|+|+|+... ..+...+ +..+.|..++.
T Consensus 258 ~g~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~---------- 320 (374)
T 2iw1_A 258 FSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAE---------- 320 (374)
T ss_dssp ESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECS----------
T ss_pred CCCcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCC----------
Confidence 88864 4668888887 554 4667899999999999999765 3456677 58889998862
Q ss_pred CCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 048562 401 SAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEK 436 (464)
Q Consensus 401 ~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~ 436 (464)
.-+.+++.++|.++++|++..+.+.+++++..+.
T Consensus 321 --~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 354 (374)
T 2iw1_A 321 --PFSQEQLNEVLRKALTQSPLRMAWAENARHYADT 354 (374)
T ss_dssp --SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 2488999999999999886566666666666554
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.11 E-value=7.2e-09 Score=102.19 Aligned_cols=321 Identities=11% Similarity=0.060 Sum_probs=163.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-C-CcEEEEeCCcchhhhhhhhhhccCCCCCeEE-EEecCCCCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH-G-AKSTIITSPKHALSFQKSINRNQQSGLPITI-KTLHLPDDIEIPDTD 81 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r-G-h~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~ 81 (464)
+++|||+++.. +.++......++++|.++ | |+|+++++....+......... ++.. ..++. .. .
T Consensus 6 ~~~mkIl~v~~-~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~------~~-~ 72 (375)
T 3beo_A 6 TERLKVMTIFG-TRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIF-----GITPDFDLNI------MK-D 72 (375)
T ss_dssp SSCEEEEEEEC-SHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHH-----TCCCSEECCC------CC-T
T ss_pred CcCceEEEEec-CcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHc-----CCCCcccccc------CC-C
Confidence 34689999974 467788888999999987 5 8887776654332222111100 2211 12211 00 0
Q ss_pred CcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCC-ch--hhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCCCCC
Q 048562 82 MSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMF-HH--WSADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKVSSD 158 (464)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~-~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (464)
. ..+..........+.+++++.+||+|++... .. .+..+++..|+|++.+....
T Consensus 73 ~-~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~---------------------- 129 (375)
T 3beo_A 73 R-QTLIDITTRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL---------------------- 129 (375)
T ss_dssp T-CCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC----------------------
T ss_pred c-ccHHHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc----------------------
Confidence 0 1111122233556778888899999999543 22 23457788999998652210
Q ss_pred CCceecCCCCCccccChhhhhh-hc-cccEEEEcCccccChHHHHHHHh-hhCCCCeEEeCcccccccCcchhhhcCCCC
Q 048562 159 YEPFVVPGLPDKIELTALSFRF-EE-KSFGIVVNSFYDLEPAYVEYFKQ-DLGNDKAWFVGPVSLCNRNIEDKAERGQKT 235 (464)
Q Consensus 159 ~~~~~~p~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~ 235 (464)
.. .... ..+.....+. .. ..+.+++.+ +...+.+.. .....++..+|....... . .....
T Consensus 130 -~~--~~~~---~~~~~~~~~~~~~~~~d~ii~~s-----~~~~~~~~~~g~~~~~i~vi~n~~~d~~---~--~~~~~- 192 (375)
T 3beo_A 130 -RT--WDKY---SPYPEEMNRQLTGVMADLHFSPT-----AKSATNLQKENKDESRIFITGNTAIDAL---K--TTVKE- 192 (375)
T ss_dssp -CC--SCTT---SSTTHHHHHHHHHHHCSEEEESS-----HHHHHHHHHTTCCGGGEEECCCHHHHHH---H--HHCCS-
T ss_pred -cc--cccc---CCChhHhhhhHHhhhhheeeCCC-----HHHHHHHHHcCCCcccEEEECChhHhhh---h--hhhhh-
Confidence 00 0000 0011111111 11 244555433 111122222 111235666663211100 0 00000
Q ss_pred CCCccccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhC-----CCceEEEEccCCCCCCCCcCCcccccCCch
Q 048562 236 SIDEGKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEAS-----NHSFIWVVGKIFQSPGTRKENGIEENWLPS 310 (464)
Q Consensus 236 ~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~ 310 (464)
...+++.+-+ .++++|+++.|...... +.+..+++|+..+ +.++++ +.. .+ .. +-+
T Consensus 193 -~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g----------~~-~~-~~~ 253 (375)
T 3beo_A 193 -TYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVH----------MN-PV-VRE 253 (375)
T ss_dssp -SCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECC----------SC-HH-HHH
T ss_pred -hhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCC----------CC-HH-HHH
Confidence 0011111111 23457777777654221 3456666666542 344443 322 00 00 111
Q ss_pred hHHHhhcCCCCcEEecCcccH---HHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEE
Q 048562 311 GFEERMGESKRGLIIRGWAPQ---LLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVK 387 (464)
Q Consensus 311 ~~~~~~~~~~~nv~v~~~vpq---~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~ 387 (464)
...+... ..+++.+.+++++ ..++..+++ ||+..| +.+.||+++|+|+|+....+.. ..+. ..|.|..
T Consensus 254 ~~~~~~~-~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v-~~g~g~~ 324 (375)
T 3beo_A 254 TANDILG-DYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGI-EAGTLKL 324 (375)
T ss_dssp HHHHHHT-TCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHH-HTTSEEE
T ss_pred HHHHHhh-ccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----ceee-cCCceEE
Confidence 1222111 1368988777764 467777777 888764 4589999999999998543332 3343 6678877
Q ss_pred eccccccCCCCCCCCccChHHHHHHHHHHhcCC
Q 048562 388 VGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTG 420 (464)
Q Consensus 388 l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~ 420 (464)
++ .+.++|.++|.++++|+
T Consensus 325 v~--------------~d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 325 AG--------------TDEETIFSLADELLSDK 343 (375)
T ss_dssp CC--------------SCHHHHHHHHHHHHHCH
T ss_pred cC--------------CCHHHHHHHHHHHHhCh
Confidence 73 27899999999999986
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.11 E-value=3.7e-09 Score=103.03 Aligned_cols=127 Identities=15% Similarity=0.073 Sum_probs=82.1
Q ss_pred EEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHH--
Q 048562 255 LYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQL-- 332 (464)
Q Consensus 255 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~-- 332 (464)
+++..|+.. ..+.+..++++++.++.+++++ |.. . ..+.+.+...+..++|...+|+++.
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g-----------~----~~~~l~~~~~~~~~~v~~~g~~~~~~l 225 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPA-----------W----EPEYFDEITRRYGSTVEPIGEVGGERR 225 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCC-----------C----CHHHHHHHHHHHTTTEEECCCCCHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCc-----------c----cHHHHHHHHHHhCCCEEEeccCCHHHH
Confidence 344567765 4455777888888777776554 432 0 1122222211114799999999865
Q ss_pred -HHhcccCceeeccc-----------cc-hhhHHHHHHcCCceeecccccccchhHHHHHhh--hcceEEeccccccCCC
Q 048562 333 -LILEHTAVGGFMTH-----------CG-WNSTLESVSAGVPMVTWPITAEQFSNEKLISDV--LKIGVKVGSVNWVSWS 397 (464)
Q Consensus 333 -~lL~~~~~~~~ItH-----------GG-~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~--~G~G~~l~~~~~~~~~ 397 (464)
+++..+++-++-+. -| .+++.||+++|+|+|+... ..+...+ +. -+.|..+ .
T Consensus 226 ~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g~~~--~------ 292 (342)
T 2iuy_A 226 LDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVGYGT--D------ 292 (342)
T ss_dssp HHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECCSSS--C------
T ss_pred HHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCceEEc--C------
Confidence 67888888333233 33 4789999999999999865 3355555 34 3456554 2
Q ss_pred CCCCCccChHHHHHHHHHHhc
Q 048562 398 TEPSAAVGRDKVEVAVKRLMG 418 (464)
Q Consensus 398 ~~~~~~~~~~~l~~ai~~il~ 418 (464)
. +.+++.++|.++++
T Consensus 293 -----~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 293 -----F-APDEARRTLAGLPA 307 (342)
T ss_dssp -----C-CHHHHHHHHHTSCC
T ss_pred -----C-CHHHHHHHHHHHHH
Confidence 4 88999999999986
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.06 E-value=1.6e-08 Score=101.36 Aligned_cols=93 Identities=15% Similarity=0.016 Sum_probs=66.8
Q ss_pred CCcEEecCccc------HHHHhcccCceeecccc----chhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEEec
Q 048562 320 KRGLIIRGWAP------QLLILEHTAVGGFMTHC----GWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVG 389 (464)
Q Consensus 320 ~~nv~v~~~vp------q~~lL~~~~~~~~ItHG----G~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~ 389 (464)
.++|.+.+|++ -.+++..+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+ +.-+.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEE-
Confidence 46899888775 2456777787 55433 45789999999999999764 3455555 456678777
Q ss_pred cccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 048562 390 SVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELG 434 (464)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~ 434 (464)
. +.+++.++|.++++|++..+.+.+++++..
T Consensus 364 -------------~-d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 394 (416)
T 2x6q_A 364 -------------R-DANEAVEVVLYLLKHPEVSKEMGAKAKERV 394 (416)
T ss_dssp -------------S-SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred -------------C-CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 3 678999999999998755555566655543
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.03 E-value=2e-09 Score=107.10 Aligned_cols=320 Identities=13% Similarity=0.079 Sum_probs=174.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchh-hhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcc
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHAL-SFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSA 84 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (464)
-|.|++++. |++-.+.-+-+|.++|.++ +++.++.+....+ .+..... .++++ +.| ++.+... ..
T Consensus 8 ~~~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~----~~~~i-----~~~-~~~l~~~--~~ 73 (385)
T 4hwg_A 8 HMLKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF----DDMGI-----RKP-DYFLEVA--AD 73 (385)
T ss_dssp CCCEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH----C-CCC-----CCC-SEECCCC--CC
T ss_pred hhhheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH----hhCCC-----CCC-ceecCCC--CC
Confidence 366776654 5888889999999999887 8877776654433 2222110 01222 212 1111111 11
Q ss_pred cHHHHHhhhHHHHHHhhhhCCCCEEEeCC--CchhhHHHHHHcCCCeEEEeccchHHHHHHHHHHhhCCCCCCCCCCCce
Q 048562 85 TPRTDTSMLQEPLKSLLVDSRPDCIVHDM--FHHWSADVINSMNIPRIVFNGNCCFSRCILENVRKYKPHEKVSSDYEPF 162 (464)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~--~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (464)
.....+......+.+++++.+||+|++-. ...+++.+|.++|||++-+... ....
T Consensus 74 ~~~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag-----------------------lrs~ 130 (385)
T 4hwg_A 74 NTAKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG-----------------------NRCF 130 (385)
T ss_dssp CSHHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC-----------------------CCCS
T ss_pred CHHHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC-----------------------Cccc
Confidence 23445556688899999999999998843 3334578899999997655221 0000
Q ss_pred ecCCCCCccccChhhhhhh-cc-ccEEEEcCccccChHHHHHH-HhhhCCCCeEEeCcccccccCcc-hhhhcCCCCCCC
Q 048562 163 VVPGLPDKIELTALSFRFE-EK-SFGIVVNSFYDLEPAYVEYF-KQDLGNDKAWFVGPVSLCNRNIE-DKAERGQKTSID 238 (464)
Q Consensus 163 ~~p~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~vGp~~~~~~~~~-~~~~~~~~~~~~ 238 (464)
. ..++....+.+ .+ .+.+++.+ ....+.+ .....+.+++.+|....+..... ... .
T Consensus 131 ~-------~~~pee~nR~~~~~~a~~~~~~t-----e~~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~--------~ 190 (385)
T 4hwg_A 131 D-------QRVPEEINRKIIDHISDVNITLT-----EHARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKI--------L 190 (385)
T ss_dssp C-------TTSTHHHHHHHHHHHCSEEEESS-----HHHHHHHHHTTCCGGGEEECCCSHHHHHHHHHHHH--------H
T ss_pred c-------ccCcHHHHHHHHHhhhceeecCC-----HHHHHHHHHcCCCcCcEEEECCchHHHHHHhhhhc--------c
Confidence 0 01111101111 11 22333322 1112222 22221346889994222110000 000 1
Q ss_pred ccccccccCcCCCCcEEEEecCCCCCCC-HHhHHHHHHHHhhC----CCceEEEEccCCCCCCCCcCCcccccCCchhHH
Q 048562 239 EGKILSFLDSKETNSVLYISFGSLARLS-PEQLLEIAYGLEAS----NHSFIWVVGKIFQSPGTRKENGIEENWLPSGFE 313 (464)
Q Consensus 239 ~~~l~~~l~~~~~~~~V~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~ 313 (464)
.+++.+-++-. +++.|+++.|...... .+.+..+++|+.++ +..+|+...+. +.+.+.
T Consensus 191 ~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~----------------~~~~l~ 253 (385)
T 4hwg_A 191 KSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR----------------TKKRLE 253 (385)
T ss_dssp HCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH----------------HHHHHH
T ss_pred hhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH----------------HHHHHH
Confidence 12233333322 2458888888754322 24566777777653 56677765432 111111
Q ss_pred Hh-h-cCCCCcEEecCcc---cHHHHhcccCceeeccccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEEe
Q 048562 314 ER-M-GESKRGLIIRGWA---PQLLILEHTAVGGFMTHCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKV 388 (464)
Q Consensus 314 ~~-~-~~~~~nv~v~~~v---pq~~lL~~~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l 388 (464)
+. . .+..+|+.+.+.+ +...++.++++ +|+-.|.. +.||...|+|+|+++...+-+. .+ +.|.++.+
T Consensus 254 ~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGgv-~~EA~alG~Pvv~~~~~ter~e----~v-~~G~~~lv 325 (385)
T 4hwg_A 254 DLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGTI-TEEASILNLPALNIREAHERPE----GM-DAGTLIMS 325 (385)
T ss_dssp TSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTTH-HHHHHHTTCCEEECSSSCSCTH----HH-HHTCCEEC
T ss_pred HHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCccH-HHHHHHcCCCEEEcCCCccchh----hh-hcCceEEc
Confidence 10 0 0013578876555 45678888887 89988764 6999999999999987544222 23 67877666
Q ss_pred ccccccCCCCCCCCccChHHHHHHHHHHhcCCh
Q 048562 389 GSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGE 421 (464)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~ 421 (464)
..++++|.+++.++++|++
T Consensus 326 --------------~~d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 326 --------------GFKAERVLQAVKTITEEHD 344 (385)
T ss_dssp --------------CSSHHHHHHHHHHHHTTCB
T ss_pred --------------CCCHHHHHHHHHHHHhChH
Confidence 2478999999999999874
No 40
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.77 E-value=1.4e-06 Score=88.98 Aligned_cols=141 Identities=13% Similarity=0.052 Sum_probs=83.7
Q ss_pred EEEEecCCCCCCCHHhHHHHHHHHhh---CCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEE-ecCcc
Q 048562 254 VLYISFGSLARLSPEQLLEIAYGLEA---SNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLI-IRGWA 329 (464)
Q Consensus 254 ~V~vs~GS~~~~~~~~~~~~~~al~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~-v~~~v 329 (464)
.+++..|.+. ....+..+++|+.. .+.+++++-.+. .. +-+.+.+...+.+.++. ..++.
T Consensus 293 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~l~ivG~g~----------~~----~~~~l~~~~~~~~~~v~~~~g~~ 356 (485)
T 2qzs_A 293 PLFAVVSRLT--SQKGLDLVLEALPGLLEQGGQLALLGAGD----------PV----LQEGFLAAAAEYPGQVGVQIGYH 356 (485)
T ss_dssp CEEEEEEEES--GGGCHHHHHHHHHHHHHTTCEEEEEEEEC----------HH----HHHHHHHHHHHSTTTEEEEESCC
T ss_pred eEEEEeccCc--cccCHHHHHHHHHHHhhCCcEEEEEeCCc----------hH----HHHHHHHHHHhCCCcEEEeCCCC
Confidence 5666677765 23345555555554 355655543322 11 11223332222246785 67774
Q ss_pred cH--HHHhcccCceeecc----ccchhhHHHHHHcCCceeecccccccchhHHHHHhhh---------cceEEecccccc
Q 048562 330 PQ--LLILEHTAVGGFMT----HCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVL---------KIGVKVGSVNWV 394 (464)
Q Consensus 330 pq--~~lL~~~~~~~~It----HGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~ 394 (464)
.. ..++..+++ +|. -|-.+++.||+++|+|+|+... ..+...+ +.- +.|..++.
T Consensus 357 ~~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~---- 425 (485)
T 2qzs_A 357 EAFSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFED---- 425 (485)
T ss_dssp HHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEECS----
T ss_pred HHHHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEECC----
Confidence 32 367888888 552 2445789999999999999754 2344444 343 57888865
Q ss_pred CCCCCCCCccChHHHHHHHHHHh---cCChHHHHHHHHH
Q 048562 395 SWSTEPSAAVGRDKVEVAVKRLM---GTGEEAAEMRRRA 430 (464)
Q Consensus 395 ~~~~~~~~~~~~~~l~~ai~~il---~~~~~~~~~~~~a 430 (464)
-+.++++++|.+++ +|++..+.+.+++
T Consensus 426 ---------~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 455 (485)
T 2qzs_A 426 ---------SNAWSLLRAIRRAFVLWSRPSLWRFVQRQA 455 (485)
T ss_dssp ---------SSHHHHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred ---------CCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 38899999999999 6764333343333
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.74 E-value=7.8e-07 Score=90.87 Aligned_cols=141 Identities=11% Similarity=0.049 Sum_probs=84.2
Q ss_pred EEEEecCCCCCCCHHhHHHHHHHHhh---CCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEE-ecCcc
Q 048562 254 VLYISFGSLARLSPEQLLEIAYGLEA---SNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLI-IRGWA 329 (464)
Q Consensus 254 ~V~vs~GS~~~~~~~~~~~~~~al~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~-v~~~v 329 (464)
.+++..|.+.. .+.+..+++|+.. .+.+++++-.+. .. +-+.+.+...+.+.++. ..++.
T Consensus 292 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~----------~~----~~~~l~~~~~~~~~~v~~~~g~~ 355 (485)
T 1rzu_A 292 PLFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVVLGAGD----------VA----LEGALLAAASRHHGRVGVAIGYN 355 (485)
T ss_dssp CEEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEEEECBC----------HH----HHHHHHHHHHHTTTTEEEEESCC
T ss_pred eEEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEEEeCCc----------hH----HHHHHHHHHHhCCCcEEEecCCC
Confidence 46777888763 3334555555544 355655543221 11 11223333322246786 67774
Q ss_pred cH--HHHhcccCceeecc----ccchhhHHHHHHcCCceeecccccccchhHHHHHhhh---------cceEEecccccc
Q 048562 330 PQ--LLILEHTAVGGFMT----HCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVL---------KIGVKVGSVNWV 394 (464)
Q Consensus 330 pq--~~lL~~~~~~~~It----HGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~ 394 (464)
.. ..++..+++ +|. -|-..++.||+++|+|+|+... ......+ +.- +.|..++.
T Consensus 356 ~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~---- 424 (485)
T 1rzu_A 356 EPLSHLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFSP---- 424 (485)
T ss_dssp HHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEESS----
T ss_pred HHHHHHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeCC----
Confidence 32 357888887 552 2445789999999999999754 2344444 343 67888865
Q ss_pred CCCCCCCCccChHHHHHHHHHHh---cCChHHHHHHHHH
Q 048562 395 SWSTEPSAAVGRDKVEVAVKRLM---GTGEEAAEMRRRA 430 (464)
Q Consensus 395 ~~~~~~~~~~~~~~l~~ai~~il---~~~~~~~~~~~~a 430 (464)
-+.+++.++|.+++ +|++..+.+.+++
T Consensus 425 ---------~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 454 (485)
T 1rzu_A 425 ---------VTLDGLKQAIRRTVRYYHDPKLWTQMQKLG 454 (485)
T ss_dssp ---------CSHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred ---------CCHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 37899999999999 6764333343333
No 42
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.56 E-value=5.7e-06 Score=89.27 Aligned_cols=95 Identities=9% Similarity=0.042 Sum_probs=65.1
Q ss_pred CCcEEecC----cccHHHHhc----ccCceeeccc----cchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEE
Q 048562 320 KRGLIIRG----WAPQLLILE----HTAVGGFMTH----CGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVK 387 (464)
Q Consensus 320 ~~nv~v~~----~vpq~~lL~----~~~~~~~ItH----GG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~ 387 (464)
.++|...+ +++..++.. .+++ ||.- |-..++.||+++|+|+|+. |-......+ +.-+.|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEE
Confidence 46788877 444455554 3455 5532 3457999999999999996 444555566 46668988
Q ss_pred eccccccCCCCCCCCccChHHHHHHHHHHh----cCChHHHHHHHHHHHHH
Q 048562 388 VGSVNWVSWSTEPSAAVGRDKVEVAVKRLM----GTGEEAAEMRRRAGELG 434 (464)
Q Consensus 388 l~~~~~~~~~~~~~~~~~~~~l~~ai~~il----~~~~~~~~~~~~a~~l~ 434 (464)
++.. +.++++++|.+++ .|++..+.+.+++++..
T Consensus 712 v~p~-------------D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 712 IDPY-------------HGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp ECTT-------------SHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred eCCC-------------CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 8654 7889999997766 88865556666665544
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.56 E-value=6.1e-05 Score=78.37 Aligned_cols=96 Identities=14% Similarity=0.123 Sum_probs=66.2
Q ss_pred CcEEecCcccHH---HHhcccCceeec---cccchhhHHHHHHcCCceeecccccc-cchhHHHHHhhhcceEEeccccc
Q 048562 321 RGLIIRGWAPQL---LILEHTAVGGFM---THCGWNSTLESVSAGVPMVTWPITAE-QFSNEKLISDVLKIGVKVGSVNW 393 (464)
Q Consensus 321 ~nv~v~~~vpq~---~lL~~~~~~~~I---tHGG~~s~~Eal~~GvP~v~~P~~~D-Q~~na~~v~~~~G~G~~l~~~~~ 393 (464)
++|.+.+++++. .++..+++ || ..|+.+++.||+++|+|+|++|-..= -...+..+ ...|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhc----
Confidence 689999999754 45777777 54 12677899999999999999764211 11223455 4667765441
Q ss_pred cCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 048562 394 VSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGEL 433 (464)
Q Consensus 394 ~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l 433 (464)
-+.+++.+++.++++|++..+.+++++++.
T Consensus 507 ----------~~~~~la~~i~~l~~~~~~~~~~~~~~~~~ 536 (568)
T 2vsy_A 507 ----------ADDAAFVAKAVALASDPAALTALHARVDVL 536 (568)
T ss_dssp ----------SSHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ----------CCHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 278999999999999875444555555443
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.54 E-value=1.4e-05 Score=79.45 Aligned_cols=90 Identities=13% Similarity=0.131 Sum_probs=57.8
Q ss_pred EEecCcccHH---HHhcccCceeecc--ccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcc-------------
Q 048562 323 LIIRGWAPQL---LILEHTAVGGFMT--HCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKI------------- 384 (464)
Q Consensus 323 v~v~~~vpq~---~lL~~~~~~~~It--HGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~------------- 384 (464)
+...+|+++. +++..+++-++-+ -|...++.||+++|+|+|+.... .....+ ..|.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v--~~~~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF--SGDCVYKIKPSAWISVD 329 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS--CTTTSEEECCCEEEECT
T ss_pred eeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH--ccCcccccccccccccc
Confidence 7778999844 4667788722222 23356999999999999996532 333333 2222
Q ss_pred ---eE--EeccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHH
Q 048562 385 ---GV--KVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGE 432 (464)
Q Consensus 385 ---G~--~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~ 432 (464)
|. .+.. -+.+++.++| ++++|++..+.+.+++++
T Consensus 330 ~~~G~~gl~~~-------------~d~~~la~~i-~l~~~~~~~~~~~~~a~~ 368 (413)
T 3oy2_A 330 DRDGIGGIEGI-------------IDVDDLVEAF-TFFKDEKNRKEYGKRVQD 368 (413)
T ss_dssp TTCSSCCEEEE-------------CCHHHHHHHH-HHTTSHHHHHHHHHHHHH
T ss_pred cccCcceeeCC-------------CCHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 44 5543 3899999999 999987444444444444
No 45
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.39 E-value=0.00015 Score=71.52 Aligned_cols=98 Identities=12% Similarity=0.183 Sum_probs=71.5
Q ss_pred cEEecCccc-HHHHhcccCceeecc-----ccchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEEeccccccC
Q 048562 322 GLIIRGWAP-QLLILEHTAVGGFMT-----HCGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVGSVNWVS 395 (464)
Q Consensus 322 nv~v~~~vp-q~~lL~~~~~~~~It-----HGG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 395 (464)
++.+.++.. -..++..+++ ++. -+|..++.||+++|+|+|+-|...+.......+ ...|.+..+ .
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~--~---- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEV--K---- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEEC--C----
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEe--C----
Confidence 456655543 4667877776 432 134578999999999999877766666666666 366776655 2
Q ss_pred CCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 048562 396 WSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAK 438 (464)
Q Consensus 396 ~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~ 438 (464)
+.++|.++|.++++| +..+.|.+++++..+.-.
T Consensus 332 ---------d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 332 ---------NETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp ---------SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred ---------CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 678999999999998 777788888888776644
No 46
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.31 E-value=7e-06 Score=71.82 Aligned_cols=132 Identities=8% Similarity=0.019 Sum_probs=86.6
Q ss_pred EEEEecCCCCCCCHHhHHHHHHHHhhC-CCceEEEEccCCCCCCCCcCCcccccCCchhHHH-hhcCCCCcEEecCcccH
Q 048562 254 VLYISFGSLARLSPEQLLEIAYGLEAS-NHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEE-RMGESKRGLIIRGWAPQ 331 (464)
Q Consensus 254 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~nv~v~~~vpq 331 (464)
.+++..|+.. ....+..+++++..+ +.+++++-... .... +-.-..+ .. ..++|+.+.+|+++
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~-----------~~~~-l~~~~~~~~~-~l~~~v~~~g~~~~ 88 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFS-----------KGDH-AERYARKIMK-IAPDNVKFLGSVSE 88 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCC-----------TTST-HHHHHHHHHH-HSCTTEEEEESCCH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCc-----------cHHH-HHHHHHhhhc-ccCCcEEEeCCCCH
Confidence 3455667775 345577788888886 45555543322 1000 2111110 10 12568999999986
Q ss_pred ---HHHhcccCceeecc---c-cchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEEeccccccCCCCCCCCcc
Q 048562 332 ---LLILEHTAVGGFMT---H-CGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVGSVNWVSWSTEPSAAV 404 (464)
Q Consensus 332 ---~~lL~~~~~~~~It---H-GG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~ 404 (464)
..++..+++ +|. + |...++.||+++|+|+|+... ..+...+ +..+.|..+ . -
T Consensus 89 ~e~~~~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~-------------~ 147 (177)
T 2f9f_A 89 EELIDLYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-N-------------A 147 (177)
T ss_dssp HHHHHHHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-C-------------S
T ss_pred HHHHHHHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-C-------------C
Confidence 567888888 554 2 334599999999999999753 4555556 466688888 4 3
Q ss_pred ChHHHHHHHHHHhcCCh
Q 048562 405 GRDKVEVAVKRLMGTGE 421 (464)
Q Consensus 405 ~~~~l~~ai~~il~~~~ 421 (464)
+.+++.++|.++++|++
T Consensus 148 d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 148 DVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp CHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHhCHH
Confidence 88999999999999874
No 47
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.03 E-value=4.3e-05 Score=65.61 Aligned_cols=146 Identities=10% Similarity=0.076 Sum_probs=88.5
Q ss_pred cEEEEecCCCCCCCHHhHHHHHHHHhhCC--CceEE-EEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcc
Q 048562 253 SVLYISFGSLARLSPEQLLEIAYGLEASN--HSFIW-VVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWA 329 (464)
Q Consensus 253 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~--~~~v~-~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~v 329 (464)
+++++..|++.. ...+..+++++..+. ..+-+ .+|.. . ..+.+.+...+.+.++.+ +|+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g-----------~----~~~~~~~~~~~~~~~v~~-g~~ 63 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKG-----------P----DEKKIKLLAQKLGVKAEF-GFV 63 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCS-----------T----THHHHHHHHHHHTCEEEC-CCC
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCC-----------c----cHHHHHHHHHHcCCeEEE-eec
Confidence 477788888863 445667777777653 12333 33332 1 112222222211447888 999
Q ss_pred cHH---HHhcccCceeecc----ccchhhHHHHHHcCC-ceeecccccccchhHHHHHhhhcceEEeccccccCCCCCCC
Q 048562 330 PQL---LILEHTAVGGFMT----HCGWNSTLESVSAGV-PMVTWPITAEQFSNEKLISDVLKIGVKVGSVNWVSWSTEPS 401 (464)
Q Consensus 330 pq~---~lL~~~~~~~~It----HGG~~s~~Eal~~Gv-P~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~ 401 (464)
|+. .++..+++ +|. -|...++.||+++|+ |+|+.... ......+ +..+. .+..
T Consensus 64 ~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~-~~~~~--~~~~----------- 124 (166)
T 3qhp_A 64 NSNELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFA-LDERS--LFEP----------- 124 (166)
T ss_dssp CHHHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGC-SSGGG--EECT-----------
T ss_pred CHHHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCC---Cchhhhc-cCCce--EEcC-----------
Confidence 864 46677777 553 244579999999996 99994321 1122222 23222 3332
Q ss_pred CccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 048562 402 AAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKA 437 (464)
Q Consensus 402 ~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~ 437 (464)
-+.+++.++|.++++|++..+.+.+++++..+.+
T Consensus 125 --~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 158 (166)
T 3qhp_A 125 --NNAKDLSAKIDWWLENKLERERMQNEYAKSALNY 158 (166)
T ss_dssp --TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHC
Confidence 4889999999999999876667777777766443
No 48
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.02 E-value=0.00089 Score=66.61 Aligned_cols=77 Identities=14% Similarity=-0.020 Sum_probs=58.1
Q ss_pred CCcEEecCcccHH---HHhcccCceeecc-ccc-hhhHHHHH-------HcCCceeecccccccchhHHHHHhhhcceEE
Q 048562 320 KRGLIIRGWAPQL---LILEHTAVGGFMT-HCG-WNSTLESV-------SAGVPMVTWPITAEQFSNEKLISDVLKIGVK 387 (464)
Q Consensus 320 ~~nv~v~~~vpq~---~lL~~~~~~~~It-HGG-~~s~~Eal-------~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~ 387 (464)
.+||...+++|+. +++..+++-++-+ +.| .+++.||+ ++|+|+|+... + ..-..|..
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G~l 332 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKSRF 332 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSSEE
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcceEE
Confidence 5689999999864 4677788732222 233 46789999 99999999765 5 45556877
Q ss_pred -eccccccCCCCCCCCccChHHHHHHHHHHhcCC
Q 048562 388 -VGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTG 420 (464)
Q Consensus 388 -l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~ 420 (464)
++.. +.++++++|.++++|+
T Consensus 333 ~v~~~-------------d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 333 GYTPG-------------NADSVIAAITQALEAP 353 (406)
T ss_dssp EECTT-------------CHHHHHHHHHHHHHCC
T ss_pred EeCCC-------------CHHHHHHHHHHHHhCc
Confidence 7553 8899999999999987
No 49
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.78 E-value=0.00011 Score=73.57 Aligned_cols=80 Identities=14% Similarity=0.041 Sum_probs=56.6
Q ss_pred CCcEEecCcccHHH---HhcccCceeecc--c--cchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEEecccc
Q 048562 320 KRGLIIRGWAPQLL---ILEHTAVGGFMT--H--CGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVGSVN 392 (464)
Q Consensus 320 ~~nv~v~~~vpq~~---lL~~~~~~~~It--H--GG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 392 (464)
..++...+++|+.+ ++..+++ ||. . |=..++.||+++|+|+|+ -..+ ....+ +.-..|..++.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeCC--
Confidence 45788889997654 5666777 553 2 223578999999999998 3222 12334 34446887865
Q ss_pred ccCCCCCCCCccChHHHHHHHHHHhcCC
Q 048562 393 WVSWSTEPSAAVGRDKVEVAVKRLMGTG 420 (464)
Q Consensus 393 ~~~~~~~~~~~~~~~~l~~ai~~il~~~ 420 (464)
-++++++++|.++++|+
T Consensus 364 -----------~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 364 -----------LNPENIAETLVELCMSF 380 (413)
T ss_dssp -----------CSHHHHHHHHHHHHHHT
T ss_pred -----------CCHHHHHHHHHHHHcCH
Confidence 48899999999999987
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.72 E-value=0.00028 Score=75.60 Aligned_cols=151 Identities=20% Similarity=0.246 Sum_probs=100.4
Q ss_pred CCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHH-hhcCCCCcEEecCcc
Q 048562 251 TNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEE-RMGESKRGLIIRGWA 329 (464)
Q Consensus 251 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~nv~v~~~v 329 (464)
++.+||+||-+..+.+++.+...++.|++.+..++|..... ......|-..+.. .+. ++.+.+.+..
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~----------~~~~~~l~~~~~~~gi~--~~r~~f~~~~ 588 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFP----------AVGEPNIQQYAQNMGLP--QNRIIFSPVA 588 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETT----------GGGHHHHHHHHHHTTCC--GGGEEEEECC
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCc----------HHHHHHHHHHHHhcCCC--cCeEEECCCC
Confidence 45699999999999999999999999999999999998665 1111112111211 122 5567888888
Q ss_pred cHHHHh---cccCceeec---cccchhhHHHHHHcCCceeeccc-ccccchhHHHHHhhhcceEEeccccccCCCCCCCC
Q 048562 330 PQLLIL---EHTAVGGFM---THCGWNSTLESVSAGVPMVTWPI-TAEQFSNEKLISDVLKIGVKVGSVNWVSWSTEPSA 402 (464)
Q Consensus 330 pq~~lL---~~~~~~~~I---tHGG~~s~~Eal~~GvP~v~~P~-~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~ 402 (464)
|..+-| ..+++ ++ ..+|.+|++|||+.|||+|.++- ..=...-+..+ ..+|+...+
T Consensus 589 ~~~~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~i-------------- 651 (723)
T 4gyw_A 589 PKEEHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELI-------------- 651 (723)
T ss_dssp CHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGB--------------
T ss_pred CHHHHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCcccc--------------
Confidence 765544 44555 54 37889999999999999999983 22334445566 477877655
Q ss_pred ccChHHHHHHHHHHhcCChHHHHHHHHH
Q 048562 403 AVGRDKVEVAVKRLMGTGEEAAEMRRRA 430 (464)
Q Consensus 403 ~~~~~~l~~ai~~il~~~~~~~~~~~~a 430 (464)
.-+.++-.+.--++-.|.++...+|++.
T Consensus 652 a~~~~~Y~~~a~~la~d~~~l~~lr~~l 679 (723)
T 4gyw_A 652 AKNRQEYEDIAVKLGTDLEYLKKVRGKV 679 (723)
T ss_dssp CSSHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 2355555555555666764444444443
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.67 E-value=0.00036 Score=72.23 Aligned_cols=153 Identities=16% Similarity=0.047 Sum_probs=98.1
Q ss_pred cEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEE--ccCCCCCCCCcCCcccccCCchhHH-HhhcCCCCcEEecCcc
Q 048562 253 SVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVV--GKIFQSPGTRKENGIEENWLPSGFE-ERMGESKRGLIIRGWA 329 (464)
Q Consensus 253 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~~~~~nv~v~~~v 329 (464)
.++|.+++...+..++.+..+.+.+.+.+..++|.. +.. ......+-..+. ..+ .+.+.+.+.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~----------~g~~~~~~~~~~~~GI---~~Rv~F~g~~ 507 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS----------NGITHPYVERFIKSYL---GDSATAHPHS 507 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC----------CGGGHHHHHHHHHHHH---GGGEEEECCC
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC----------chhhHHHHHHHHHcCC---CccEEEcCCC
Confidence 599999999999999999999999999888888753 322 010000111111 122 3467788888
Q ss_pred cHHHHh---cccCceee-ccccchhhHHHHHHcCCceeeccccc-ccchhHHHHHhhhcceEE-eccccccCCCCCCCCc
Q 048562 330 PQLLIL---EHTAVGGF-MTHCGWNSTLESVSAGVPMVTWPITA-EQFSNEKLISDVLKIGVK-VGSVNWVSWSTEPSAA 403 (464)
Q Consensus 330 pq~~lL---~~~~~~~~-ItHGG~~s~~Eal~~GvP~v~~P~~~-DQ~~na~~v~~~~G~G~~-l~~~~~~~~~~~~~~~ 403 (464)
|..+.+ ..+++-+- ...+|.+|++||+++|||+|+++-.. -...-+..+ ...|+... + .
T Consensus 508 p~~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LI--------------A 572 (631)
T 3q3e_A 508 PYHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLI--------------A 572 (631)
T ss_dssp CHHHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGE--------------E
T ss_pred CHHHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCccee--------------c
Confidence 866544 66776221 12377899999999999999987321 112222334 35666542 3 2
Q ss_pred cChHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 048562 404 VGRDKVEVAVKRLMGTGEEAAEMRRRAGEL 433 (464)
Q Consensus 404 ~~~~~l~~ai~~il~~~~~~~~~~~~a~~l 433 (464)
-+.++..+...++.+|.+....+++++++-
T Consensus 573 ~d~eeYv~~Av~La~D~~~l~~LR~~Lr~~ 602 (631)
T 3q3e_A 573 NTVDEYVERAVRLAENHQERLELRRYIIEN 602 (631)
T ss_dssp SSHHHHHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 467888888888999886555555555543
No 52
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.57 E-value=0.0019 Score=56.95 Aligned_cols=93 Identities=9% Similarity=0.061 Sum_probs=65.8
Q ss_pred cEEe-cCcccH---HHHhcccCceeeccc----cchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEEeccccc
Q 048562 322 GLII-RGWAPQ---LLILEHTAVGGFMTH----CGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVGSVNW 393 (464)
Q Consensus 322 nv~v-~~~vpq---~~lL~~~~~~~~ItH----GG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 393 (464)
++.+ .+++++ ..++..+++ +|.- |...++.||+++|+|+|+.... .. ..+. ..+.|..++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~-~e~~-~~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GL-RDII-TNETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HH-HHHC-CTTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----Ch-HHHc-CCCceEEecC---
Confidence 8999 999984 456777777 5532 3357899999999999987542 22 2221 3456777754
Q ss_pred cCCCCCCCCccChHHHHHHHHHHhc-CChHHHHHHHHHHHHHH
Q 048562 394 VSWSTEPSAAVGRDKVEVAVKRLMG-TGEEAAEMRRRAGELGE 435 (464)
Q Consensus 394 ~~~~~~~~~~~~~~~l~~ai~~il~-~~~~~~~~~~~a~~l~~ 435 (464)
-+.+++.++|.++++ |++..+.+.+++++..+
T Consensus 165 ----------~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 165 ----------GDPGELANAILKALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp ----------TCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred ----------CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 388999999999999 98655566666655443
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.37 E-value=0.0096 Score=57.81 Aligned_cols=106 Identities=8% Similarity=0.007 Sum_probs=74.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcchhhhhhhhhhccCCCCCe-EEEEecCCCCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKHALSFQKSINRNQQSGLPI-TIKTLHLPDDIEIPDTD 81 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~ 81 (464)
.+++|||++-..+.|++.-+.++.+.|+++ +.+|++++.+.+.+.++.. +.+ +++.++.
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~---------- 67 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDK---------- 67 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECC----------
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCc----------
Confidence 468899999999999999999999999998 9999999999887776653 234 3455531
Q ss_pred CcccHHHHHhhhHHHHHHhhhhCCC-CEEEeCCCchhhHHHHHHcCCCeEE
Q 048562 82 MSATPRTDTSMLQEPLKSLLVDSRP-DCIVHDMFHHWSADVINSMNIPRIV 131 (464)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~l~~~~p-D~Vi~D~~~~~~~~~A~~~giP~v~ 131 (464)
. ........ ...+...|++.+| |++|.=....-...++...|+|..+
T Consensus 68 -~-~~~~~~~~-~~~l~~~Lr~~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 68 -K-GRHNSISG-LNEVAREINAKGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -S-SHHHHHHH-HHHHHHHHHHHCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -c-cccccHHH-HHHHHHHHhhCCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0 01111111 2234455677889 9999765544556678888998654
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.28 E-value=0.037 Score=53.23 Aligned_cols=103 Identities=14% Similarity=-0.015 Sum_probs=67.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcchhhhhhhhhhccCCCCCe-EEEEecCCCCCCCCCCCCcc
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKHALSFQKSINRNQQSGLPI-TIKTLHLPDDIEIPDTDMSA 84 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~ 84 (464)
+|||++...+.|++.-..++.++|+++ +.+|++++.+...+.+... +.+ +++.++.. ....
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~~--------~~~~ 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPLG--------HGAL 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecCC--------cccc
Confidence 489999998889999999999999987 9999999998776654432 234 34443210 0000
Q ss_pred cHHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEE
Q 048562 85 TPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIV 131 (464)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~ 131 (464)
.+ .....+.+.|++.+||+||.=....-...++...|+|...
T Consensus 65 ~~-----~~~~~l~~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 EI-----GERRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp CH-----HHHHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ch-----HHHHHHHHHHHhcCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 11 1123455667788999999322223455677888999743
No 55
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.98 E-value=0.003 Score=61.10 Aligned_cols=112 Identities=14% Similarity=0.132 Sum_probs=81.8
Q ss_pred CCcEEecCcccHHHHh---cccCceeeccccch---------hhHHHHHHcCCceeecccccccchhHHHHHhhhcceEE
Q 048562 320 KRGLIIRGWAPQLLIL---EHTAVGGFMTHCGW---------NSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVK 387 (464)
Q Consensus 320 ~~nv~v~~~vpq~~lL---~~~~~~~~ItHGG~---------~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~ 387 (464)
+ ||...+|+|..++. ..++..++.+-+.. +-+.|++++|+|+|+.+ ...++..+ ++.|+|..
T Consensus 214 ~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~ 287 (339)
T 3rhz_A 214 Q-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWI 287 (339)
T ss_dssp T-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEE
T ss_pred C-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEE
Confidence 5 99999999987754 34556555533433 34789999999999754 56788888 69999998
Q ss_pred eccccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 048562 388 VGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDAEALLQEL 458 (464)
Q Consensus 388 l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~~ 458 (464)
++ +.+++.+++..+. +++.+.|++|+++.+++++ .|.-.+..+.+.+.++
T Consensus 288 ~~---------------~~~e~~~~i~~l~--~~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 288 VK---------------DVEEAIMKVKNVN--EDEYIELVKNVRSFNPILR----KGFFTRRLLTESVFQA 337 (339)
T ss_dssp ES---------------SHHHHHHHHHHCC--HHHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHHH
T ss_pred eC---------------CHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHh
Confidence 83 3578888888864 3456789999999999888 4555555555555544
No 56
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.71 E-value=0.061 Score=51.29 Aligned_cols=109 Identities=9% Similarity=-0.011 Sum_probs=66.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcchhhhhhhhhhccCCCCCe-EEEEecCCCCCCCCCCCCcc
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKHALSFQKSINRNQQSGLPI-TIKTLHLPDDIEIPDTDMSA 84 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~ 84 (464)
+|||++-..+.|++.-..++.++|+++ +.+|++++.+.+.+.+... +.+ +++.++.. . ... ..+.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~-~--~~~-~~~~ 68 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH--------AAVERVIPVAIR-R--WRK-AWFS 68 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS--------TTEEEEEEECHH-H--HHT-TTTS
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC--------CCCCEEEEccHH-H--hhh-ccch
Confidence 589999999999999999999999998 9999999999887766543 233 33343200 0 000 0000
Q ss_pred cHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhH-HHHHHcCCCeEEE
Q 048562 85 TPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSA-DVINSMNIPRIVF 132 (464)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~-~~A~~~giP~v~~ 132 (464)
.... .....+.+.|++.+||++| |.... -.. .++...|.+.+.+
T Consensus 69 --~~~~-~~~~~~~~~lr~~~~D~vi-dl~~~~~s~~~~~~l~~~~~ig~ 114 (326)
T 2gt1_A 69 --APIK-AERKAFREALQAKNYDAVI-DAQGLVKSAALVTRLAHGVKHGM 114 (326)
T ss_dssp --HHHH-HHHHHHHHHHHHSBCSEEE-ECSCCHHHHHHTGGGSBSCEEEE
T ss_pred --HHHH-HHHHHHHHHHhccCCCEEE-ECCccHHHHHHHHHHcCCcEEcc
Confidence 0000 1123344566778999999 43332 233 4555566444444
No 57
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=93.84 E-value=0.3 Score=44.66 Aligned_cols=114 Identities=12% Similarity=0.196 Sum_probs=64.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCc-cc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMS-AT 85 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~ 85 (464)
|+|||+.---|. |---+..|+++|.+.| +|+++.+...+..+..... ....+++...... ..... ..
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT----~~~pl~~~~~~~~------~~~~v~GT 68 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLT----FTEPLKMRKIDTD------FYTVIDGT 68 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCC----CSSCEEEEEEETT------EEEETTCC
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcC----CCCCceeEEeecc------ceeecCCC
Confidence 678888876554 3334677899999998 5998887765433322211 0123444333210 00000 01
Q ss_pred HHHHHhhhHHHHHHhhhhCCCCEEEeC----------CCch---hhHHHHHHcCCCeEEEecc
Q 048562 86 PRTDTSMLQEPLKSLLVDSRPDCIVHD----------MFHH---WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~~~pD~Vi~D----------~~~~---~~~~~A~~~giP~v~~~~~ 135 (464)
-.+ -..=.+..++.+.+||+||+- .+++ .++.=|..+|+|.|.++..
T Consensus 69 PaD---CV~lal~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 69 PAD---CVHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp HHH---HHHHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hHH---HHhhhhhhhcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 111 123356677888899999993 2333 3455556789999999743
No 58
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=92.11 E-value=0.87 Score=41.41 Aligned_cols=115 Identities=14% Similarity=0.232 Sum_probs=65.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcccH
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSATP 86 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (464)
|||||+..--+. |---+..|+++|.+.| +|+++.+...+.-+..... ....+.+..... +. . +.....-
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit----~~~pl~~~~~~~--~~--~-~~v~GTP 69 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLT----FTEPLKMRKIDT--DF--Y-TVIDGTP 69 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCC----CSSCEEEEEEET--TE--E-EETTCCH
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCcccee----cCCCeEEEEecC--CC--e-EEECCCH
Confidence 478888876655 4455788899999988 9999998766543333211 012344444321 00 0 0000111
Q ss_pred HHHHhhhHHHHHHhhhhCCCCEEEeCC----------Cch---hhHHHHHHcCCCeEEEecc
Q 048562 87 RTDTSMLQEPLKSLLVDSRPDCIVHDM----------FHH---WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 87 ~~~~~~~~~~l~~~l~~~~pD~Vi~D~----------~~~---~~~~~A~~~giP~v~~~~~ 135 (464)
. .-..=.+..++...+||+||+-. .++ .++.-|..+|||.|.++..
T Consensus 70 a---DCV~lal~~l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 70 A---DCVHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp H---HHHHHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred H---HHHHHHHHHhcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 1 11234566666557899999853 233 3444556789999999753
No 59
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=91.53 E-value=1.6 Score=44.57 Aligned_cols=139 Identities=12% Similarity=-0.000 Sum_probs=75.8
Q ss_pred EEEEecCCCCCCCHHhHHHHHHHHhh---CCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCccc
Q 048562 254 VLYISFGSLARLSPEQLLEIAYGLEA---SNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAP 330 (464)
Q Consensus 254 ~V~vs~GS~~~~~~~~~~~~~~al~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vp 330 (464)
.+++..|.+. +.+.+..+++|+.+ .+.++++...+. .. ....+.......+.++.+..+.+
T Consensus 328 p~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~----------~~----~~~~~~~~~~~~~~~v~~~~~~~ 391 (536)
T 3vue_A 328 PLIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLLGTGK----------KK----FEKLLKSMEEKYPGKVRAVVKFN 391 (536)
T ss_dssp CEEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEECCBC----------HH----HHHHHHHHHHHSTTTEEEECSCC
T ss_pred cEEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEEeccC----------ch----HHHHHHHHHhhcCCceEEEEecc
Confidence 4555567765 34446666666654 455666554332 11 11112222222367788777776
Q ss_pred HH---HHhcccCceeeccc----cchhhHHHHHHcCCceeecccccccchhHHHHHhhhcceEEeccccccCCCCCCCCc
Q 048562 331 QL---LILEHTAVGGFMTH----CGWNSTLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVGSVNWVSWSTEPSAA 403 (464)
Q Consensus 331 q~---~lL~~~~~~~~ItH----GG~~s~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~ 403 (464)
.. .++..+++ ||.- |=..+++||+++|+|+|+... ......| +.-.-|.........-. --..
T Consensus 392 ~~~~~~~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V-~dg~~G~~~~~~~~~g~---l~~~ 461 (536)
T 3vue_A 392 APLAHLIMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTV-IEGKTGFHMGRLSVDCK---VVEP 461 (536)
T ss_dssp HHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHC-CBTTTEEECCCCCSCTT---CCCH
T ss_pred HHHHHHHHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchhee-eCCCCccccccCCCcee---EECC
Confidence 53 46777777 5542 223589999999999998654 3334444 34444554332100000 0002
Q ss_pred cChHHHHHHHHHHhc
Q 048562 404 VGRDKVEVAVKRLMG 418 (464)
Q Consensus 404 ~~~~~l~~ai~~il~ 418 (464)
.+.+.|.++|++++.
T Consensus 462 ~d~~~la~ai~ral~ 476 (536)
T 3vue_A 462 SDVKKVAATLKRAIK 476 (536)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 356789999998875
No 60
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=90.23 E-value=0.3 Score=44.66 Aligned_cols=115 Identities=13% Similarity=0.210 Sum_probs=61.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcc
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSA 84 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (464)
+++||||+.---+. |---+..|+++|.+ +|+|+++.+...+.-...... ....+.+.... +++ .....
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~siT----l~~pl~~~~~~--~~~----~~v~G 76 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSLT----LNAPLHIKNLE--NGM----ISVEG 76 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCCC----CSSCEEEEECT--TSC----EEESS
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCccccee----cCCCeEEEEec--CCe----EEECC
Confidence 46789998887665 44457778888877 899999998766543332211 01233443321 110 00000
Q ss_pred cHHHHHhhhHHHHHHhhhhCCCCEEEeCCC---------chhhHHH----HHHcCCCeEEEecc
Q 048562 85 TPRTDTSMLQEPLKSLLVDSRPDCIVHDMF---------HHWSADV----INSMNIPRIVFNGN 135 (464)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~---------~~~~~~~----A~~~giP~v~~~~~ 135 (464)
.-.+. ..=.+..++ ..+||+||+-.- .+.+... |..+|||.|.++..
T Consensus 77 TPaDC---V~lal~~l~-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 136 (261)
T 3ty2_A 77 TPTDC---VHLAITGVL-PEMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLG 136 (261)
T ss_dssp CHHHH---HHHHTTTTS-SSCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEEC
T ss_pred CHHHH---HHHHHHHhc-CCCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcC
Confidence 11111 122343444 468999998531 2223332 33579999999754
No 61
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=89.06 E-value=3.7 Score=36.78 Aligned_cols=110 Identities=5% Similarity=0.005 Sum_probs=65.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDM 82 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (464)
.+|+||+|+..++. ..+..+.+.|.+. +++|..+.+............ ..++.+..++. ..+
T Consensus 20 ~~~~rI~~l~SG~g---~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~-----~~gIp~~~~~~--------~~~ 83 (229)
T 3auf_A 20 GHMIRIGVLISGSG---TNLQAILDGCREGRIPGRVAVVISDRADAYGLERAR-----RAGVDALHMDP--------AAY 83 (229)
T ss_dssp TTCEEEEEEESSCC---HHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHH-----HTTCEEEECCG--------GGS
T ss_pred CCCcEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHH-----HcCCCEEEECc--------ccc
Confidence 46789999987654 2467777888876 688876654422111111111 12565554420 011
Q ss_pred cccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 83 SATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
. ..+...+.+.+.|++.+||+||+=.+.- ....+-..+...++-+.++
T Consensus 84 ~-----~r~~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 84 P-----SRTAFDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp S-----SHHHHHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred c-----chhhccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 1 1123456677888999999999987643 4555666677778887443
No 62
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=88.97 E-value=2.7 Score=37.36 Aligned_cols=104 Identities=12% Similarity=0.109 Sum_probs=62.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCC--cEEEEeCCc-ch---hhhhhhhhhccCCCCCeEEEEecCCCCCCCCCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGA--KSTIITSPK-HA---LSFQKSINRNQQSGLPITIKTLHLPDDIEIPDT 80 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh--~Vt~~~~~~-~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (464)
|+||+|+..++. ..+..+.+.|.+.+| +|..+.+.. .. +...+. ++.+..+.. .
T Consensus 1 m~rI~vl~SG~g---~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~---------gIp~~~~~~--------~ 60 (216)
T 2ywr_A 1 MLKIGVLVSGRG---SNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH---------NVECKVIQR--------K 60 (216)
T ss_dssp CEEEEEEECSCC---HHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH---------TCCEEECCG--------G
T ss_pred CCEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc---------CCCEEEeCc--------c
Confidence 568998877654 346777888888888 776555432 22 222222 444444320 0
Q ss_pred CCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 81 DMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
.. . ..+...+.+.+.|++.+||+||+=.+.. ....+-..+...++-++++
T Consensus 61 ~~-~----~r~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 61 EF-P----SKKEFEERMALELKKKGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp GS-S----SHHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred cc-c----chhhhhHHHHHHHHhcCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 01 0 1123456677888999999999987643 4555666666778887544
No 63
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=88.89 E-value=3 Score=36.35 Aligned_cols=98 Identities=13% Similarity=0.130 Sum_probs=62.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcc------hhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKH------ALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDT 80 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (464)
+-.|++++..+.|-..-.+++|-..+.+|++|.|+..-.. .+.+... ++.+.... .++.+...
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L---------~v~~~~~g--~gf~~~~~ 96 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH---------GVEFQVMA--TGFTWETQ 96 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG---------TCEEEECC--TTCCCCGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC---------CcEEEEcc--cccccCCC
Confidence 4578888888999999999999999999999999954332 1222222 35665543 23322111
Q ss_pred CCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch
Q 048562 81 DMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH 116 (464)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~ 116 (464)
. ...-...........++.+.+.++|+||.|....
T Consensus 97 ~-~~~~~~~a~~~l~~a~~~l~~~~yDlvILDEi~~ 131 (196)
T 1g5t_A 97 N-READTAACMAVWQHGKRMLADPLLDMVVLDELTY 131 (196)
T ss_dssp G-HHHHHHHHHHHHHHHHHHTTCTTCSEEEEETHHH
T ss_pred C-cHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCc
Confidence 1 0111112233455666777788999999998743
No 64
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=85.54 E-value=5.6 Score=35.10 Aligned_cols=108 Identities=8% Similarity=0.078 Sum_probs=63.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSA 84 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (464)
|+||.++..++.+ .+..+.++|.+. +|+|..+.+......+...... .++.+..++. ..+.
T Consensus 3 m~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~-----~gIp~~~~~~--------~~~~- 65 (212)
T 3av3_A 3 MKRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAAR-----ENVPAFVFSP--------KDYP- 65 (212)
T ss_dssp CEEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHH-----TTCCEEECCG--------GGSS-
T ss_pred CcEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHH-----cCCCEEEeCc--------cccc-
Confidence 6788888776543 366777888877 7899776654221111111111 1444444320 0110
Q ss_pred cHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 85 TPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
.-+...+.+.+.|++.+||+||+=.+.. ....+-..+...++-++++
T Consensus 66 ----~~~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 66 ----SKAAFESEILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ----SHHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ----chhhhHHHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 1122355677888999999999987643 4555666677778887544
No 65
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=83.19 E-value=6.1 Score=38.34 Aligned_cols=89 Identities=12% Similarity=0.116 Sum_probs=56.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc-chhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCc
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK-HALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMS 83 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (464)
|+++|||++..+.. .+.+++++++.|++|.++..+. ........ . .++.++. .
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~~~~~~~~~a---------d-~~~~~~~-----------~ 58 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPNAHKPCLNLA---------D-EISYMDI-----------S 58 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSSCCHHHHHHC---------S-EEEECCT-----------T
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCCCCCcchhhC---------C-eEEEecC-----------C
Confidence 57889999977654 3669999999999999986543 32222111 1 2233220 0
Q ss_pred ccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCc---hhhHHHHHHcCCC
Q 048562 84 ATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFH---HWSADVINSMNIP 128 (464)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~---~~~~~~A~~~giP 128 (464)
-.+.+.+++++.++|.|+..... .....+++.+|+|
T Consensus 59 ---------d~~~l~~~~~~~~~d~v~~~~~~~~~~~~a~~~~~~gl~ 97 (403)
T 4dim_A 59 ---------NPDEVEQKVKDLNLDGAATCCLDTGIVSLARICDKENLV 97 (403)
T ss_dssp ---------CHHHHHHHTTTSCCSEEECCSCSTTHHHHHHHHHHHTCS
T ss_pred ---------CHHHHHHHHHHcCCCEEEeCCcchhHHHHHHHHHHcCcC
Confidence 13567778888899999973222 2455677788985
No 66
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=82.93 E-value=8.3 Score=36.35 Aligned_cols=104 Identities=9% Similarity=0.033 Sum_probs=56.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhh------h-hhhccCCCCCeEEEEecCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQK------S-INRNQQSGLPITIKTLHLPDDIEI 77 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~------~-~~~~~~~g~~~~~~~~~~~~~~~~ 77 (464)
|+++||+|+..+. ..+...++|.++||+|..+.+......-.. . ...+.. .++.+.. +
T Consensus 5 ~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~--~gIpv~~-~------- 69 (318)
T 3q0i_A 5 SQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALE--HNVPVYQ-P------- 69 (318)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHH--TTCCEEC-C-------
T ss_pred ccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHH--cCCCEEc-c-------
Confidence 5688999998763 344567888889999987766432211000 0 000000 1222211 0
Q ss_pred CCCCCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 78 PDTDMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
..+. .+++.+.|++.+||++|+=.+.. ....+.......++-++++
T Consensus 70 ---~~~~---------~~~~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpS 116 (318)
T 3q0i_A 70 ---ENFK---------SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGS 116 (318)
T ss_dssp ---SCSC---------SHHHHHHHHTTCCSEEEESSCCSCCCHHHHTSSTTCEEEEESS
T ss_pred ---CcCC---------CHHHHHHHHhcCCCEEEEeCccccCCHHHHhhCcCCEEEeCCc
Confidence 0010 13566788899999999986643 3444555555567777654
No 67
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=82.59 E-value=4.3 Score=42.53 Aligned_cols=43 Identities=12% Similarity=0.023 Sum_probs=30.5
Q ss_pred EEecCcccH---------HHHhcccCceeeccc---cc-hhhHHHHHHcCCceeeccc
Q 048562 323 LIIRGWAPQ---------LLILEHTAVGGFMTH---CG-WNSTLESVSAGVPMVTWPI 367 (464)
Q Consensus 323 v~v~~~vpq---------~~lL~~~~~~~~ItH---GG-~~s~~Eal~~GvP~v~~P~ 367 (464)
+.+-.|++. .+++..+++ ||.- =| ..+.+||+++|+|+|+.-.
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred EEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 334566655 457878887 5543 23 4699999999999998654
No 68
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=82.53 E-value=20 Score=29.87 Aligned_cols=110 Identities=10% Similarity=0.056 Sum_probs=64.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCccc
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSAT 85 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (464)
++.||++.+.++..|-....-++..|..+|++|.+.+.....+.+.....+. +..+-..+. ....
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~---~~diV~lS~------------~~~~ 81 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQE---DVDVIGVSI------------LNGA 81 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHT---TCSEEEEEE------------SSSC
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhc---CCCEEEEEe------------echh
Confidence 4689999999999999999999999999999999987654444433332221 233333332 1112
Q ss_pred HHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEE
Q 048562 86 PRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIV 131 (464)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~ 131 (464)
....+..+.+.+++.-. .+.-+++.......-...++..|+-.++
T Consensus 82 ~~~~~~~~i~~L~~~g~-~~i~v~vGG~~~~~~~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 82 HLHLMKRLMAKLRELGA-DDIPVVLGGTIPIPDLEPLRSLGIREIF 126 (161)
T ss_dssp HHHHHHHHHHHHHHTTC-TTSCEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred hHHHHHHHHHHHHhcCC-CCCEEEEeCCCchhcHHHHHHCCCcEEE
Confidence 22333333333333210 1244666664443333456788887544
No 69
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=81.79 E-value=3.9 Score=37.03 Aligned_cols=115 Identities=18% Similarity=0.280 Sum_probs=61.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcccHH
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSATPR 87 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (464)
||||+.---+. |---+..|+++|.+.| +|+++.+...+..+.....- ...+++..+...++. ..+.....-.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl----~~pl~~~~~~~~~~~--~~~~v~GTPa 72 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITI----HVPLWMKKVFISERV--VAYSTTGTPA 72 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCC----SSCCCEEECCCSSSE--EEEEESSCHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccC----CCCeEEEEeccCCCC--ceEEECCcHH
Confidence 46777765554 3344778899999888 89999987665443332110 112333333210000 0000000111
Q ss_pred HHHhhhHHHHHHhhhhCCCCEEEeCC----------Cch---hhHHHHHHcCCCeEEEec
Q 048562 88 TDTSMLQEPLKSLLVDSRPDCIVHDM----------FHH---WSADVINSMNIPRIVFNG 134 (464)
Q Consensus 88 ~~~~~~~~~l~~~l~~~~pD~Vi~D~----------~~~---~~~~~A~~~giP~v~~~~ 134 (464)
+ -..=.+..++ ..+||+||+-. .++ .++.=|..+|||.|.++.
T Consensus 73 D---CV~lal~~l~-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 73 D---CVKLAYNVVM-DKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp H---HHHHHHHTTS-TTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred H---HHHHHHHhhc-cCCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 1 1233455555 46899999853 222 344455568999999975
No 70
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=81.19 E-value=2.2 Score=37.95 Aligned_cols=110 Identities=8% Similarity=0.027 Sum_probs=65.9
Q ss_pred CcEEEEEcCCCccCHHH----HHHHHHHHHhC-CCcEEEEeCCcc-hhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCC
Q 048562 7 PVEMFFFPYVGGGHQIP----MVDIARIFAAH-GAKSTIITSPKH-ALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDT 80 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p----~l~la~~L~~r-Gh~Vt~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (464)
|..|+++.--..|.+++ ++.-|++|++. |-+|+.++-... .+..... .. .|..- .+.+..+
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~-~~---~Gad~-v~~v~~~-------- 69 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQI-LP---YGVDK-LHVFDAE-------- 69 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHH-GG---GTCSE-EEEEECG--------
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHH-Hh---cCCCE-EEEecCc--------
Confidence 66799988766676655 57778888774 777776654322 2222222 11 13332 2222110
Q ss_pred CCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch---hhHHHHHHcCCCeEEE
Q 048562 81 DMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH---WSADVINSMNIPRIVF 132 (464)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~---~~~~~A~~~giP~v~~ 132 (464)
.+..+ ........+.+++++.+||+|++-.... .+..+|.++++|+++-
T Consensus 70 -~~~~~--~~~~~a~~l~~~i~~~~p~~Vl~g~t~~G~~laprlAa~L~~~~~sd 121 (217)
T 3ih5_A 70 -GLYPY--TSLPHTSILVNLFKEEQPQICLMGATVIGRDLGPRVSSALTSGLTAD 121 (217)
T ss_dssp -GGSSC--CHHHHHHHHHHHHHHHCCSEEEEECSHHHHHHHHHHHHHTTCCCBCS
T ss_pred -ccccC--CHHHHHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHHHHhCCCccce
Confidence 11111 1123456677778888999999997654 4777999999999874
No 71
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=80.85 E-value=8.8 Score=36.37 Aligned_cols=106 Identities=7% Similarity=0.041 Sum_probs=58.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC-Ccc---hhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS-PKH---ALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDT 80 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~-~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (464)
|.++||+|+.. -+....+.++|.++||+|..+.+ +.. ...+.....+ .++.+....
T Consensus 20 ~~~mrIvf~G~-----~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~-----~gIpv~~~~---------- 79 (329)
T 2bw0_A 20 FQSMKIAVIGQ-----SLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEK-----DGVPVFKYS---------- 79 (329)
T ss_dssp -CCCEEEEECC-----HHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHH-----HTCCEEECS----------
T ss_pred CCCCEEEEEcC-----cHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHH-----cCCCEEecC----------
Confidence 34579999831 24444677899999999986654 211 0111111010 134333321
Q ss_pred CCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 81 DMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
.... -....+.+.+.|++.+||++|+=.+.. ....+-......++-++++
T Consensus 80 ~~~~-----~~~~~~~~~~~l~~~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpS 130 (329)
T 2bw0_A 80 RWRA-----KGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPS 130 (329)
T ss_dssp CCEE-----TTEECHHHHHHHHTTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESS
T ss_pred cccc-----cccccHHHHHHHHhcCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCC
Confidence 0000 011234566778889999999887643 4555666666778887655
No 72
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=80.31 E-value=6.4 Score=35.78 Aligned_cols=111 Identities=14% Similarity=0.200 Sum_probs=60.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCc-ccH
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMS-ATP 86 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ 86 (464)
||||+.---+. |---+..|+++|.+.| +|+++.+...+.-+.....- ...+++.... ...+... ..-
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~aiTl----~~Pl~~~~~~------~~~~~v~~GTP 69 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSLTL----ESSLRTFTFD------NGDIAVQMGTP 69 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCC----SSCCEEEECT------TSCEEEETCCH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCcCC----CCCeEEEEeC------CCCeEECCCCH
Confidence 57887776555 4445778899998876 99999987665443332111 1233333331 0011111 111
Q ss_pred HHHHhhhHHHHHHhhhhCCCCEEEeCC----------Cchh---hHHHHHHcCCCeEEEec
Q 048562 87 RTDTSMLQEPLKSLLVDSRPDCIVHDM----------FHHW---SADVINSMNIPRIVFNG 134 (464)
Q Consensus 87 ~~~~~~~~~~l~~~l~~~~pD~Vi~D~----------~~~~---~~~~A~~~giP~v~~~~ 134 (464)
.+ -..=.+..++ ..+||+||+-. +++. ++.=|..+|||.|.++.
T Consensus 70 aD---CV~lal~~ll-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 70 TD---CVYLGVNALM-RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp HH---HHHHHHHTTS-SSCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred HH---HHHHHHhhcc-CCCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 11 1233455555 56899999853 2222 22233457999999975
No 73
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=79.96 E-value=0.88 Score=46.59 Aligned_cols=39 Identities=18% Similarity=0.272 Sum_probs=28.9
Q ss_pred CCcEEEEEcC---C---CccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 6 SPVEMFFFPY---V---GGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 6 ~~~~vl~~~~---~---~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
..|||||++. | +.|=-.-+-.|.++|+++||+|+++++.
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 5799999963 1 2222234668899999999999999854
No 74
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=79.07 E-value=10 Score=34.13 Aligned_cols=116 Identities=13% Similarity=0.112 Sum_probs=61.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCC-CCCCCCCcccH
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDI-EIPDTDMSATP 86 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~ 86 (464)
||||+.---+. |---+..|+++|.+.| +|+++.+...+..+..... ....+++..++..... ....+.....-
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siT----l~~pl~~~~~~~~~~~~~~~~~~v~GTP 74 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAIT----IAHPVRAYPHPSPLHAPHFPAYRVRGTP 74 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCC----CSSCBEEEECCCCTTSCCCCEEEEESCH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccccc----CCCCeEEEEeccCcCCCCCceEEEcCcH
Confidence 46777765554 3344778899999888 8999998766543333211 1224555554321000 00001111111
Q ss_pred HHHHhhhHHHHHHhhhhCCCCEEEeCC----------Cch---hhHHHHHHcCCCeEEEecc
Q 048562 87 RTDTSMLQEPLKSLLVDSRPDCIVHDM----------FHH---WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 87 ~~~~~~~~~~l~~~l~~~~pD~Vi~D~----------~~~---~~~~~A~~~giP~v~~~~~ 135 (464)
.+.. .=.+. + ..+||+||+-. .++ .++.=|..+|||.|.++..
T Consensus 75 aDCV---~lal~--l-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 130 (244)
T 2e6c_A 75 ADCV---ALGLH--L-FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVP 130 (244)
T ss_dssp HHHH---HHHHH--H-SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHH---HHHHc--C-CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEecc
Confidence 1111 11222 3 56899999853 222 3444555689999999753
No 75
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=78.95 E-value=19 Score=32.56 Aligned_cols=117 Identities=9% Similarity=0.064 Sum_probs=65.0
Q ss_pred CcEEEEEcCC-CccCHHHHHHHHHHHHhCCCcEEEEeC----C--cch--hhhhhhhhhccCCCCCeEEEEecCCCCCCC
Q 048562 7 PVEMFFFPYV-GGGHQIPMVDIARIFAAHGAKSTIITS----P--KHA--LSFQKSINRNQQSGLPITIKTLHLPDDIEI 77 (464)
Q Consensus 7 ~~~vl~~~~~-~~GH~~p~l~la~~L~~rGh~Vt~~~~----~--~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 77 (464)
|..+++.... +-|=..-.+.|++.|+++|++|.++=+ . ... ..+... .|.......+-+....
T Consensus 26 m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~------~g~~~~~~~~~~~~p~-- 97 (251)
T 3fgn_A 26 MTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRL------AGVTQLAGLARYPQPM-- 97 (251)
T ss_dssp CEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHH------HCCCEEEEEEECSSSS--
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHH------cCCCCCCCCeeECCCC--
Confidence 4445555544 888999999999999999999999731 1 111 111111 1211111111111000
Q ss_pred CCCCCcccHHHHH----hhhHHHHHHhhhh--CCCCEEEeCCCc----------hhhHHHHHHcCCCeEEEeccc
Q 048562 78 PDTDMSATPRTDT----SMLQEPLKSLLVD--SRPDCIVHDMFH----------HWSADVINSMNIPRIVFNGNC 136 (464)
Q Consensus 78 ~~~~~~~~~~~~~----~~~~~~l~~~l~~--~~pD~Vi~D~~~----------~~~~~~A~~~giP~v~~~~~~ 136 (464)
........ ....+.+.+.+++ .++|+||+|... .....+|+.++.|+|.+....
T Consensus 98 -----sP~~aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~ 167 (251)
T 3fgn_A 98 -----APAAAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTAD 167 (251)
T ss_dssp -----CHHHHHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSS
T ss_pred -----ChHHHHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCC
Confidence 00111111 1123445555543 579999999731 245679999999999987654
No 76
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=78.92 E-value=6.9 Score=36.14 Aligned_cols=114 Identities=12% Similarity=0.149 Sum_probs=61.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcccHH
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSATPR 87 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (464)
||||+.---|. +---+..|+++|.+.| +|+++.+...+..+...... ...+++...+.. +. ..+.....-.
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siTl----~~pl~~~~~~~~-~~--~~~~v~GTPa 71 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITL----HKPLRMYEVDLC-GF--RAIATSGTPS 71 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCC----SSCBCEEEEECS-SS--EEEEESSCHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccC----CCCeEEEEeccC-CC--ceEEECCcHH
Confidence 46777765554 3344778899999988 89999987665443332111 123344443211 00 0000011111
Q ss_pred HHHhhhHHHHHHhhhhCCCCEEEeCC-----------Cch---hhHHHHHHcCCCeEEEecc
Q 048562 88 TDTSMLQEPLKSLLVDSRPDCIVHDM-----------FHH---WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 88 ~~~~~~~~~l~~~l~~~~pD~Vi~D~-----------~~~---~~~~~A~~~giP~v~~~~~ 135 (464)
+. ..=.+..+ ..+||+||+.. +++ .++.=|..+|||.|.++..
T Consensus 72 DC---V~lal~~l--~~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 72 DT---VYLATFGL--GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp HH---HHHHHHHH--TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HH---HHHHHhcC--CCCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 11 12234333 57899999742 222 3444455689999999864
No 77
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=77.95 E-value=2.4 Score=37.38 Aligned_cols=47 Identities=11% Similarity=0.106 Sum_probs=38.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhh
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKS 53 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 53 (464)
+++||++...|+.|-+. ...|.+.|.++|++|.++.++.....+...
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~e 49 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMATE 49 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHHH
Confidence 46789888888777666 899999999999999999998766665543
No 78
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=77.67 E-value=2.5 Score=34.71 Aligned_cols=105 Identities=10% Similarity=0.091 Sum_probs=59.2
Q ss_pred CCCCCCCcEEEEEcCC-CccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCC
Q 048562 1 MDSKSSPVEMFFFPYV-GGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPD 79 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~-~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 79 (464)
|..+..|.-++++..| ....+.-.+=+...|.++||+|++++++.....++-. -|+++-
T Consensus 1 ~~~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva-----------------DPe~~Y--- 60 (157)
T 1kjn_A 1 MKTESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA-----------------DPEGIY--- 60 (157)
T ss_dssp -----CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH-----------------STTCCS---
T ss_pred CccccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc-----------------CCCcch---
Confidence 3334444444555566 5555556788899999999999999998765555543 011111
Q ss_pred CCCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch----hhHHHHHHcCCCeEEEe
Q 048562 80 TDMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH----WSADVINSMNIPRIVFN 133 (464)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~----~~~~~A~~~giP~v~~~ 133 (464)
.... ..+.+.+.++.+ ..+|++++-.+-- .+.......+.+.+.+.
T Consensus 61 ---~~~~----~diD~~l~~i~e-~~~d~~~~FvHNDAgvsY~~T~~~i~~~~~~aiV 110 (157)
T 1kjn_A 61 ---TDEM----VDLESCINELAE-GDYEFLAGFVPNDAAAAYLVTFAGILNTETLAII 110 (157)
T ss_dssp ---CSEE----EEHHHHHHHCCT-TSCSEEEEEESSHHHHHHHHHHHHHHCSEEEEEE
T ss_pred ---hcce----eeHHHHHhhhhh-cCCCEEEEEEecchhHHHHHHHHHhcCCCeEEEE
Confidence 1111 123444544444 6789888765432 23444556677766654
No 79
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=77.65 E-value=2.8 Score=34.21 Aligned_cols=47 Identities=13% Similarity=0.012 Sum_probs=38.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhh
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQK 52 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 52 (464)
++.||++.+.++-.|-....-++..|..+|++|.+.+.....+.+..
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~ 48 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIK 48 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 45789999999999999999999999999999998876544444433
No 80
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=77.50 E-value=6.5 Score=37.36 Aligned_cols=41 Identities=12% Similarity=0.137 Sum_probs=33.5
Q ss_pred CcEEEEEc-CCCccCHHHHHHHHHHHHhCCCcEEEEeCCcch
Q 048562 7 PVEMFFFP-YVGGGHQIPMVDIARIFAAHGAKSTIITSPKHA 47 (464)
Q Consensus 7 ~~~vl~~~-~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~ 47 (464)
+++|+|+. -||.|-..-...+|..|+++|++|.++..+...
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 45565554 569999999999999999999999999887543
No 81
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=77.46 E-value=21 Score=31.40 Aligned_cols=107 Identities=12% Similarity=0.068 Sum_probs=62.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCccc
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSAT 85 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (464)
+||+++..+..+ .+..|.+.+.+. +|+|..+.+............ ..++.+..++. ..+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~-----~~gIp~~~~~~--------~~~~-- 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERAR-----QAGIATHTLIA--------SAFD-- 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHH-----HTTCEEEECCG--------GGCS--
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHH-----HcCCcEEEeCc--------cccc--
Confidence 378887776553 366677777665 688877665432211111111 12555554320 0010
Q ss_pred HHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 86 PRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
..+...+.+.+.|++.+||+||+=.+.. ....+-..+...++-++++
T Consensus 63 ---~r~~~~~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 63 ---SREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ---SHHHHHHHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---chhhccHHHHHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 1123456778889999999999987643 4555666677778887544
No 82
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=76.12 E-value=10 Score=35.64 Aligned_cols=100 Identities=9% Similarity=0.077 Sum_probs=58.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchh----------hhhhhhhhccCCCCCeEEEEecCCCCC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHAL----------SFQKSINRNQQSGLPITIKTLHLPDDI 75 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~----------~~~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (464)
+++||+|+..+.. .....++|.+.||+|..+.+..... .+.....+ .++.+.. |
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~-----~gIpv~~---~--- 65 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEE-----KGLPVFQ---P--- 65 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHH-----TTCCEEC---C---
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHH-----cCCcEEe---c---
Confidence 4689999987542 3555677888899998766542211 01111000 1222211 1
Q ss_pred CCCCCCCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 76 EIPDTDMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
..+. .+.+.+.|++.+||++|+=.+.. ....+-......++-++++
T Consensus 66 -----~~~~---------~~~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 112 (314)
T 1fmt_A 66 -----VSLR---------PQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGS 112 (314)
T ss_dssp -----SCSC---------SHHHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESS
T ss_pred -----CCCC---------CHHHHHHHHhcCCCEEEEeeccccCCHHHHhhccCCEEEEcCC
Confidence 0110 24566778889999999976643 4555556666778888655
No 83
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=75.53 E-value=14 Score=34.83 Aligned_cols=35 Identities=14% Similarity=0.037 Sum_probs=29.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
.|+||.|+-.++.| +-.+|+.|.++||+|+..=..
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 47899999998877 557999999999999987543
No 84
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=75.24 E-value=3.7 Score=35.61 Aligned_cols=45 Identities=7% Similarity=0.093 Sum_probs=37.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhh
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQK 52 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 52 (464)
|+||++...|+.|- .-...+.+.|.++|++|.++.++...+.+..
T Consensus 1 mk~IllgvTGs~aa-~k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 1 MQKIALCITGASGV-IYGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CCEEEEEECSSTTH-HHHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCEEEEEEECHHHH-HHHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 36899998888884 4689999999999999999999876666655
No 85
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=75.22 E-value=5.7 Score=35.16 Aligned_cols=110 Identities=9% Similarity=0.115 Sum_probs=60.8
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCC
Q 048562 4 KSSPVEMFFFPYVGGGHQIPMVDIARIFAA-HGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDM 82 (464)
Q Consensus 4 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~-rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (464)
.+.|+||+|+.++..+-+ ..|.+++.. .+++|..+.+.......+.. . . .++.+..++. ..
T Consensus 9 ~~~~~ri~vl~SG~gsnl---~all~~~~~~~~~eI~~Vis~~~a~~~~~A-~---~--~gIp~~~~~~---------~~ 70 (215)
T 3da8_A 9 PSAPARLVVLASGTGSLL---RSLLDAAVGDYPARVVAVGVDRECRAAEIA-A---E--ASVPVFTVRL---------AD 70 (215)
T ss_dssp CCSSEEEEEEESSCCHHH---HHHHHHSSTTCSEEEEEEEESSCCHHHHHH-H---H--TTCCEEECCG---------GG
T ss_pred CCCCcEEEEEEeCChHHH---HHHHHHHhccCCCeEEEEEeCCchHHHHHH-H---H--cCCCEEEeCc---------cc
Confidence 356789999988665433 344444433 34688777665432211111 0 0 1444444320 00
Q ss_pred cccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 83 SATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
+. ..+...+++.+.|++.+||+||+=.+.. ....+...+...++-++++
T Consensus 71 ~~----~r~~~d~~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 71 HP----SRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp SS----SHHHHHHHHHHHHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred cc----chhhhhHHHHHHHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 00 1122356788899999999999976643 4455556666667777443
No 86
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=73.99 E-value=17 Score=34.23 Aligned_cols=104 Identities=12% Similarity=0.139 Sum_probs=58.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhh------h-hhccCCCCCeEEEEecCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKS------I-NRNQQSGLPITIKTLHLPDDIEI 77 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~------~-~~~~~~g~~~~~~~~~~~~~~~~ 77 (464)
.+|+||+|+..+..+ +...+.|.++||+|..+.+......-... + ..+.. .++.+...
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~--~gIpv~~~-------- 66 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEK--HGIPVLQP-------- 66 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCCCCEETTTTEECCCHHHHHHHH--TTCCEECC--------
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCCCcccCCCcccCCCHHHHHHHH--cCCCEEcc--------
Confidence 468999999888554 34567888899999887764332110000 0 00000 12221110
Q ss_pred CCCCCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 78 PDTDMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
.... .+...+.|++.+||++|+=.+.. ....+-......++-++++
T Consensus 67 --~~~~----------~~~~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpS 113 (317)
T 3rfo_A 67 --LRIR----------EKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHAS 113 (317)
T ss_dssp --SCTT----------SHHHHHHHHHHCCSEEEESSCCSCCCHHHHHSSTTCEEEEESS
T ss_pred --ccCC----------CHHHHHHHHhcCCCEEEEcCchhhCCHHHHhhCcCCEEEECCc
Confidence 0110 12334667888999999987643 4455556666678888655
No 87
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=73.96 E-value=32 Score=29.18 Aligned_cols=45 Identities=18% Similarity=0.082 Sum_probs=28.8
Q ss_pred EecCcccH-HHHhcccCceeeccccchhhHHHH---HHcCCceeecccc
Q 048562 324 IIRGWAPQ-LLILEHTAVGGFMTHCGWNSTLES---VSAGVPMVTWPIT 368 (464)
Q Consensus 324 ~v~~~vpq-~~lL~~~~~~~~ItHGG~~s~~Ea---l~~GvP~v~~P~~ 368 (464)
.+.+..++ ..++..-+...++--||.||+.|+ +.+++|++.+|.+
T Consensus 92 i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred EEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 34455443 333333233356677999886655 6799999999984
No 88
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=73.66 E-value=2 Score=41.65 Aligned_cols=37 Identities=14% Similarity=0.180 Sum_probs=30.7
Q ss_pred CcEEEEEc-CCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 7 PVEMFFFP-YVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 7 ~~~vl~~~-~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
|++|+++. -++.|-..-...+|..|+++|++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 46676655 45888999999999999999999999987
No 89
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=73.20 E-value=11 Score=36.83 Aligned_cols=97 Identities=11% Similarity=0.064 Sum_probs=55.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcc
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSA 84 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (464)
.+..|++++..+ ..+ ..+.+++++.|++|+++.+...... ... ..--.++.++ .+.
T Consensus 3 ~~~k~l~Il~~~-~~~----~~i~~aa~~lG~~vv~v~~~~~~~~--~~~------~~~d~~~~~~-----------~~~ 58 (425)
T 3vot_A 3 KRNKNLAIICQN-KHL----PFIFEEAERLGLKVTFFYNSAEDFP--GNL------PAVERCVPLP-----------LFE 58 (425)
T ss_dssp CCCCEEEEECCC-TTC----CHHHHHHHHTTCEEEEEEETTSCCC--CSC------TTEEEEEEEC-----------TTT
T ss_pred CCCcEEEEECCC-hhH----HHHHHHHHHCCCEEEEEECCCcccc--cCH------hhccEEEecC-----------CCC
Confidence 355677777654 322 2356788889999998865432110 000 0011233332 111
Q ss_pred cHHHHHhhhHHHHHHhhhhCCCCEEEeCC--CchhhHHHHHHcCCCe
Q 048562 85 TPRTDTSMLQEPLKSLLVDSRPDCIVHDM--FHHWSADVINSMNIPR 129 (464)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~--~~~~~~~~A~~~giP~ 129 (464)
..+.+.+.+.++.++.++|.|+.-. ....+..+++.+|+|.
T Consensus 59 ----d~~~~~~~~~~~~~~~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 59 ----DEEAAMDVVRQTFVEFPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp ----CHHHHHHHHHHHHHHSCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred ----CHHHHHHHHHHhhhhcCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 1223455677777888999998642 2235667889999984
No 90
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=73.12 E-value=16 Score=32.26 Aligned_cols=106 Identities=12% Similarity=0.118 Sum_probs=61.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCcEEEEeCCcc-h---hhhhhhhhhccCCCCCeEEEEecCCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAA-HGAKSTIITSPKH-A---LSFQKSINRNQQSGLPITIKTLHLPDDIEIPD 79 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~-rGh~Vt~~~~~~~-~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 79 (464)
.+++||+++..+..+-+ ..|.+...+ .+++|..+.+... . ++.++. ++.+..++.
T Consensus 3 ~~~~riavl~SG~Gsnl---~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~---------gIp~~~~~~-------- 62 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNL---QAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQA---------DIPTHIIPH-------- 62 (215)
T ss_dssp -CCEEEEEEESSCCHHH---HHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHT---------TCCEEECCG--------
T ss_pred CCCcEEEEEEeCCcHHH---HHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHc---------CCCEEEeCc--------
Confidence 35789998888655443 344444444 3688887766422 1 122222 455444420
Q ss_pred CCCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 80 TDMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
..+. .......++.+.|++.+||+||+-.+.- ....+...+...++-++++
T Consensus 63 -~~~~----~r~~~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 63 -EEFP----SRTDFESTLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp -GGSS----SHHHHHHHHHHHHHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -cccC----chhHhHHHHHHHHHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 0011 1112356788899999999999987643 4555666666678887544
No 91
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=72.65 E-value=35 Score=27.23 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=22.2
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEe
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIIT 42 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~ 42 (464)
|+..+++.+|+++-- +-.-...+...|.+.|++|..+.
T Consensus 1 Ms~~~~~~~iLivdd----~~~~~~~l~~~L~~~g~~v~~~~ 38 (154)
T 2rjn_A 1 MSLNYKNYTVMLVDD----EQPILNSLKRLIKRLGCNIITFT 38 (154)
T ss_dssp ---CCSCCEEEEECS----CHHHHHHHHHHHHTTTCEEEEES
T ss_pred CCCCCCCCeEEEEcC----CHHHHHHHHHHHHHcCCeEEEeC
Confidence 665567778877754 34445566666777777766443
No 92
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=72.64 E-value=4 Score=35.77 Aligned_cols=45 Identities=11% Similarity=-0.093 Sum_probs=36.1
Q ss_pred CCCcEEEEEcCCCccCHH-HHHHHHHHHHhCCCcEEEEeCCcchhhh
Q 048562 5 SSPVEMFFFPYVGGGHQI-PMVDIARIFAAHGAKSTIITSPKHALSF 50 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~-p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 50 (464)
.+++||++-..|+ +..+ -.+.+.+.|.++|++|.++.+....+.+
T Consensus 5 l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 5 FAGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp CTTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred cCCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 4567898888877 5555 8999999999999999999887654443
No 93
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=72.03 E-value=4.2 Score=35.86 Aligned_cols=47 Identities=4% Similarity=0.011 Sum_probs=37.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhh
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKS 53 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 53 (464)
++++||++...++.+-+. ...+.+.|.++| +|.++.++...+.+...
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCGG
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCHH
Confidence 456789999998887665 899999999999 99999998766555443
No 94
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=71.61 E-value=15 Score=32.32 Aligned_cols=106 Identities=17% Similarity=0.143 Sum_probs=62.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCc-ch---hhhhhhhhhccCCCCCeEEEEecCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPK-HA---LSFQKSINRNQQSGLPITIKTLHLPDDIEIP 78 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~-~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 78 (464)
|++.||+++..+..+- +..|.+++.+. .++|..+.++. .. +..++. ++.+..++.
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~---------gIp~~~~~~------- 65 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA---------GIATQVFKR------- 65 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT---------TCCEEECCG-------
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc---------CCCEEEeCc-------
Confidence 6678898888765433 55566666554 37888776542 21 122222 454444320
Q ss_pred CCCCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 79 DTDMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
..+. .-+...+++.+.|++.+||+||+=.+.- ....+...+...++-++++
T Consensus 66 --~~~~----~r~~~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 66 --KDFA----SKEAHEDAILAALDVLKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp --GGSS----SHHHHHHHHHHHHHHHCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred --cccC----CHHHHHHHHHHHHHhcCCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 0010 1122356788889999999999987653 4555666666677777443
No 95
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=70.43 E-value=35 Score=29.62 Aligned_cols=48 Identities=15% Similarity=0.056 Sum_probs=40.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhh
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKS 53 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 53 (464)
++.+|++.+.++..|-....-++..|..+|++|.+++.....+.+...
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~ 134 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEA 134 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 356899999999999999999999999999999998876554444443
No 96
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=70.26 E-value=7.7 Score=36.37 Aligned_cols=34 Identities=3% Similarity=0.054 Sum_probs=25.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-C-CcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH-G-AKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r-G-h~Vt~~~~~ 44 (464)
|++++||++..+.. ..+++.|++. | ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 45689999866544 4789999886 7 888777554
No 97
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=68.10 E-value=6.8 Score=37.43 Aligned_cols=41 Identities=17% Similarity=0.215 Sum_probs=34.0
Q ss_pred CCcEEEEEc-CCCccCHHHHHHHHHHHHhCCCcEEEEeCCcc
Q 048562 6 SPVEMFFFP-YVGGGHQIPMVDIARIFAAHGAKSTIITSPKH 46 (464)
Q Consensus 6 ~~~~vl~~~-~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 46 (464)
+|.+|+|+. -++-|-..-...+|..|+++|++|.++..+..
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 455665554 45999999999999999999999999998763
No 98
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=67.79 E-value=24 Score=31.09 Aligned_cols=101 Identities=13% Similarity=0.117 Sum_probs=60.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCc-ch---hhhhhhhhhccCCCCCeEEEEecCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPK-HA---LSFQKSINRNQQSGLPITIKTLHLPDDIEIP 78 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~-~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 78 (464)
.+|+||+++..+..+- +..|.+++.+. +++|..+.++. .. +...+. ++.+..++.
T Consensus 6 ~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~---------gIp~~~~~~------- 66 (215)
T 3kcq_A 6 KKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY---------GIPTFVVKR------- 66 (215)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT---------TCCEEECCB-------
T ss_pred CCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc---------CCCEEEeCc-------
Confidence 4578998888755433 45566666554 37888776642 21 122222 454444321
Q ss_pred CCCCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 79 DTDMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
..+. .+++.+.|++.+||+||+-.+.- ....+...+...++-++++
T Consensus 67 --~~~~---------~~~~~~~L~~~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 67 --KPLD---------IEHISTVLREHDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp --TTBC---------HHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --ccCC---------hHHHHHHHHHhCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 0111 16677888999999999987753 4555666667777887544
No 99
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=67.55 E-value=34 Score=29.93 Aligned_cols=107 Identities=12% Similarity=0.087 Sum_probs=58.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCccc
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSAT 85 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (464)
+||+++..+..+-+ -.|.+.+.+. +|+|..+.+............+ .++.+..++. ..+.
T Consensus 1 ~riaVl~SG~Gs~L---~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~-----~gIp~~~~~~--------~~~~-- 62 (209)
T 1meo_A 1 ARVAVLISGTGSNL---QALIDSTREPNSSAQIDIVISNKAAVAGLDKAER-----AGIPTRVINH--------KLYK-- 62 (209)
T ss_dssp CEEEEEESSSCTTH---HHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHH-----TTCCEEECCG--------GGSS--
T ss_pred CeEEEEEECCchHH---HHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHH-----cCCCEEEECc--------cccC--
Confidence 37878777655443 3444555544 7999877654332111111010 1444443320 0111
Q ss_pred HHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 86 PRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
..+...+.+.+.|++.+||+||+=.+.. ....+-..+...++-+.++
T Consensus 63 ---~r~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 63 ---NRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp ---SHHHHHHHHHHHHHHTTCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---chhhhhHHHHHHHHhcCCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 1122345677888899999999887643 4555566666778887544
No 100
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=66.28 E-value=2.9 Score=36.42 Aligned_cols=47 Identities=2% Similarity=-0.121 Sum_probs=36.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhh
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQK 52 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 52 (464)
.++.||++...|+.|=+ -...+.+.|.++|++|.++.++...+.+..
T Consensus 6 l~~k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSV-GISSYLLYFKSFFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GGGCEEEEEECSCGGGG-GTHHHHHHHTTTSSEEEEEECHHHHHHSCH
T ss_pred cCCCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 35578888888776655 479999999999999999998866555544
No 101
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=65.81 E-value=16 Score=36.12 Aligned_cols=103 Identities=13% Similarity=-0.015 Sum_probs=55.0
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhh-hhhhhhhccCCCCCeEEEEecCCCCCCCCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALS-FQKSINRNQQSGLPITIKTLHLPDDIEIPD 79 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 79 (464)
|+..| |.|||++.. |. -.+.+++++.+.|++|..+.+...... .... .. ..+.++.+ .
T Consensus 1 m~~~~-~k~ILI~g~---g~--~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~--------ad-~~~~i~~~----~-- 59 (461)
T 2dzd_A 1 METRR-IRKVLVANR---GE--IAIRVFRACTELGIRTVAIYSKEDVGSYHRYK--------AD-EAYLVGEG----K-- 59 (461)
T ss_dssp --CCC-CSEEEECSC---HH--HHHHHHHHHHHHTCEEEEEECGGGTTCTHHHH--------SS-SEEECSTT----S--
T ss_pred CCCCc-CcEEEEECC---cH--HHHHHHHHHHHcCCEEEEEECCcccccchhhh--------CC-EEEEcCCC----C--
Confidence 66533 678888743 32 357899999999999998876533211 1111 01 12223210 0
Q ss_pred CCCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCc----hhhHHHHHHcCCCeE
Q 048562 80 TDMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFH----HWSADVINSMNIPRI 130 (464)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~----~~~~~~A~~~giP~v 130 (464)
.....+. -.+.+.+++++.++|+|+...-+ ......++.+|+|++
T Consensus 60 -~~~~~y~-----d~~~l~~~~~~~~id~v~~~~g~~~E~~~~~~~~~~~gi~~~ 108 (461)
T 2dzd_A 60 -KPIEAYL-----DIEGIIEIAKAHDVDAIHPGYGFLSENIQFAKRCREEGIIFI 108 (461)
T ss_dssp -CTTGGGT-----CHHHHHHHHHHTTCCEEECCSSSSTTCHHHHHHHHHTTCEES
T ss_pred -Ccccccc-----CHHHHHHHHHHhCCCEEEECCCccccCHHHHHHHHHcCCEEE
Confidence 0000000 13556677778899999975311 123456667898854
No 102
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=65.71 E-value=6.7 Score=33.47 Aligned_cols=44 Identities=5% Similarity=-0.077 Sum_probs=35.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhh
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQK 52 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 52 (464)
+||++...|+.|=+ -...+.+.|+++|++|.++.++.-.+.+..
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGGGGSCH
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHHHHhhH
Confidence 57888777765554 589999999999999999999876655544
No 103
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=64.97 E-value=8.7 Score=34.62 Aligned_cols=21 Identities=5% Similarity=0.143 Sum_probs=17.5
Q ss_pred hhHHHHHHhhhhCCCCEEEeC
Q 048562 92 MLQEPLKSLLVDSRPDCIVHD 112 (464)
Q Consensus 92 ~~~~~l~~~l~~~~pD~Vi~D 112 (464)
.....+.++|++.+||+|+.-
T Consensus 84 ~~~~~l~~~ir~~~PdvV~t~ 104 (242)
T 2ixd_A 84 EYIREIVKVIRTYKPKLVFAP 104 (242)
T ss_dssp HHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEC
Confidence 456788889999999999974
No 104
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=64.64 E-value=48 Score=29.00 Aligned_cols=47 Identities=13% Similarity=0.032 Sum_probs=39.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhh
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQK 52 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 52 (464)
++.||++.+.++..|-....-++..|..+|++|.+++..-..+.+..
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~ 137 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVE 137 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHH
Confidence 46899999999999999999999999999999999987655444433
No 105
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=64.02 E-value=6.4 Score=34.29 Aligned_cols=45 Identities=7% Similarity=0.075 Sum_probs=36.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEeCCcchhhhhhh
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAH-GAKSTIITSPKHALSFQKS 53 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~~~ 53 (464)
+||++-..|+.|-+. ...+.+.|.++ |++|.++.+....+.+...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 478888887766654 99999999999 9999999998766665543
No 106
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=63.76 E-value=31 Score=32.29 Aligned_cols=102 Identities=12% Similarity=0.112 Sum_probs=56.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhh------h-hhccCCCCCeEEEEecCCCCCCCCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKS------I-NRNQQSGLPITIKTLHLPDDIEIPD 79 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~------~-~~~~~~g~~~~~~~~~~~~~~~~~~ 79 (464)
++||+|+..+..+ +...++|.++||+|..+.+......-... . ..+.. .++.+.. +
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~--~gIpv~~-~--------- 64 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQ--NEIPIIQ-P--------- 64 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCCC----------CCHHHHHHHH--TTCCEEC-C---------
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCCCCccccCCccCCCHHHHHHHH--cCCCEEC-c---------
Confidence 4689999887555 34568888899999877664332110000 0 00000 1222111 0
Q ss_pred CCCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 80 TDMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
.... .+++.+.|++.+||++|+=.+.. ....+-......++-++++
T Consensus 65 ~~~~----------~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpS 111 (314)
T 3tqq_A 65 FSLR----------DEVEQEKLIAMNADVMVVVAYGLILPKKALNAFRLGCVNVHAS 111 (314)
T ss_dssp SCSS----------SHHHHHHHHTTCCSEEEEESCCSCCCHHHHTSSTTCEEEEESS
T ss_pred ccCC----------CHHHHHHHHhcCCCEEEEcCcccccCHHHHhhCcCCEEEecCc
Confidence 0110 13566788899999999986643 4445555555567887654
No 107
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=63.12 E-value=37 Score=28.78 Aligned_cols=38 Identities=18% Similarity=0.432 Sum_probs=30.4
Q ss_pred EEEEE-cCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcc
Q 048562 9 EMFFF-PYVGGGHQIPMVDIARIFAAHGAKSTIITSPKH 46 (464)
Q Consensus 9 ~vl~~-~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 46 (464)
.|.|. +-++-|=..-...||..|+++|++|.++-....
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 34444 355889999999999999999999999976543
No 108
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=62.60 E-value=6.9 Score=33.60 Aligned_cols=46 Identities=9% Similarity=-0.017 Sum_probs=35.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhh
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKS 53 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 53 (464)
+.||++...|+.+=+ -...+.+.|.++|++|.++.++.-.+.+...
T Consensus 2 ~k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~ 47 (181)
T 1g63_A 2 YGKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINTD 47 (181)
T ss_dssp CCCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCGG
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHHH
Confidence 346877777665554 7899999999999999999998766555443
No 109
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=62.08 E-value=7 Score=34.36 Aligned_cols=42 Identities=12% Similarity=-0.080 Sum_probs=32.6
Q ss_pred CCCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEeCCcch
Q 048562 5 SSPVEMFFFPYVGGGHQIP-MVDIARIFAAHGAKSTIITSPKHA 47 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p-~l~la~~L~~rGh~Vt~~~~~~~~ 47 (464)
.+.+||++...|+ +..+- ...+.+.|+++|++|.++.++...
T Consensus 3 l~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 3 LKGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp CTTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 4567898888876 45665 899999999999999999887554
No 110
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=62.05 E-value=6.2 Score=34.66 Aligned_cols=47 Identities=4% Similarity=0.041 Sum_probs=35.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCcEEEEeCCcchhhhhh
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAA-HGAKSTIITSPKHALSFQK 52 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~-rGh~Vt~~~~~~~~~~~~~ 52 (464)
+++.||++...|+.+ .+-...+.+.|.+ +|++|.++.++...+.+..
T Consensus 17 l~~k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~ 64 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERAKHFYSP 64 (206)
T ss_dssp CSSEEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGGGGSSCG
T ss_pred cCCCEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhHHHHhCH
Confidence 456788888887766 4556999999999 8999999999876655544
No 111
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=61.36 E-value=38 Score=33.77 Aligned_cols=109 Identities=20% Similarity=0.175 Sum_probs=64.1
Q ss_pred EE-ecCcccHHH---HhcccCceeecc---ccch-hhHHHHHHcCC-----ceeecccccccchhHHHHHhhhcceEEec
Q 048562 323 LI-IRGWAPQLL---ILEHTAVGGFMT---HCGW-NSTLESVSAGV-----PMVTWPITAEQFSNEKLISDVLKIGVKVG 389 (464)
Q Consensus 323 v~-v~~~vpq~~---lL~~~~~~~~It---HGG~-~s~~Eal~~Gv-----P~v~~P~~~DQ~~na~~v~~~~G~G~~l~ 389 (464)
+. +..++++.+ ++..+++ ||. .=|+ .+..||+++|+ |+|+--..+ .+. ...-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~----~l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AAN----ELTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGG----TCTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHH----HhCCeEEEC
Confidence 44 457787665 5566777 543 3354 58999999998 666543322 111 122467775
Q ss_pred cccccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Q 048562 390 SVNWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDAEALLQELKSV 461 (464)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~~~~~ 461 (464)
. .+.++++++|.++|+++++ .-+++.++.++..+ + -+...-++.+++.+++.
T Consensus 403 p-------------~d~~~lA~ai~~lL~~~~~--~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 P-------------YDRDEVAAALDRALTMSLA--ERISRHAEMLDVIV----K-NDINHWQECFISDLKQI 454 (482)
T ss_dssp T-------------TCHHHHHHHHHHHHTCCHH--HHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHHS
T ss_pred C-------------CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHhc
Confidence 5 4789999999999986521 12233333333333 2 23444556777766654
No 112
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=61.28 E-value=83 Score=27.45 Aligned_cols=108 Identities=9% Similarity=0.071 Sum_probs=59.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSA 84 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (464)
|+||+++..+. | ..+-.|.++..+. ..+|..+.++.....+..... ..++.+..++. ..+.
T Consensus 2 m~riavl~Sg~-G--snl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~-----~~gIp~~~~~~---------~~~~ 64 (211)
T 3p9x_A 2 MKRVAIFASGS-G--TNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVK-----VHEIPVCALDP---------KTYP 64 (211)
T ss_dssp -CEEEEECCTT-C--HHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHH-----TTTCCEEECCG---------GGSS
T ss_pred CCEEEEEEeCC-c--hHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHH-----HcCCCEEEeCh---------hhcC
Confidence 67899888865 4 3355666655443 257877766432111111111 12454444320 0010
Q ss_pred cHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 85 TPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
.-+....++.+.|++.+||+||+=.+.. ....+-..+...++-+.++
T Consensus 65 ----~r~~~d~~~~~~l~~~~~Dliv~agy~~Il~~~~l~~~~~~~iNiHpS 112 (211)
T 3p9x_A 65 ----SKEAYEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPS 112 (211)
T ss_dssp ----SHHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred ----chhhhHHHHHHHHHhcCCCEEEEeCchhhcCHHHHhhccCCeEEECCc
Confidence 1122356778889999999999987643 4555566666677777443
No 113
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=59.32 E-value=37 Score=34.01 Aligned_cols=110 Identities=15% Similarity=0.060 Sum_probs=66.4
Q ss_pred cEEecCcccHHH---HhcccCceeecc--ccchh-hHHHHHHcC---CceeecccccccchhHHHHHhhhc-ceEEeccc
Q 048562 322 GLIIRGWAPQLL---ILEHTAVGGFMT--HCGWN-STLESVSAG---VPMVTWPITAEQFSNEKLISDVLK-IGVKVGSV 391 (464)
Q Consensus 322 nv~v~~~vpq~~---lL~~~~~~~~It--HGG~~-s~~Eal~~G---vP~v~~P~~~DQ~~na~~v~~~~G-~G~~l~~~ 391 (464)
.|.....+|+.+ ++..+++- +++ .=|+| +..|++++| .|+|+--+.+ .+ +.+| -|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv~-vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~----~~l~~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADLL-IFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AA----EVLGEYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSEE-EECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----TH----HHHGGGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccEE-EECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CH----HHhCCCEEEECC-
Confidence 466667777644 45557772 222 45776 569999996 5665543222 22 2333 4788866
Q ss_pred cccCCCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q 048562 392 NWVSWSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEEGGSSFIDAEALLQELKS 460 (464)
Q Consensus 392 ~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~~~~ 460 (464)
.+.+.++++|.++|+++. ++-+++.+++.+..+ . -....-++.+++.|+.
T Consensus 423 ------------~D~~~lA~AI~~aL~m~~--~er~~r~~~~~~~V~----~-~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 ------------FDLVEQAEAISAALAAGP--RQRAEAAARRRDAAR----P-WTLEAWVQAQLDGLAA 472 (496)
T ss_dssp ------------TBHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHT----T-CBHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHH----H-CCHHHHHHHHHHHHhh
Confidence 489999999999998762 133444445555444 2 2233445677777764
No 114
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=59.28 E-value=65 Score=28.42 Aligned_cols=151 Identities=13% Similarity=0.075 Sum_probs=75.3
Q ss_pred ccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEE
Q 048562 245 FLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLI 324 (464)
Q Consensus 245 ~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~ 324 (464)
|++-. .+.+++|..|.+. ...++.|.+.|..+.++... +.+.+.+... ..++.
T Consensus 26 fl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~-----------------~~~~l~~l~~--~~~i~ 78 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT-----------------VSAEINEWEA--KGQLR 78 (223)
T ss_dssp EECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS-----------------CCHHHHHHHH--TTSCE
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC-----------------CCHHHHHHHH--cCCcE
Confidence 45543 4668888877554 44456666778887665432 2222222221 22333
Q ss_pred ecCcccHHHHhcccCceeeccccchhhHHHHHHc----CCceeecccccccchhHH-----HHHhhhcceEEeccccccC
Q 048562 325 IRGWAPQLLILEHTAVGGFMTHCGWNSTLESVSA----GVPMVTWPITAEQFSNEK-----LISDVLKIGVKVGSVNWVS 395 (464)
Q Consensus 325 v~~~vpq~~lL~~~~~~~~ItHGG~~s~~Eal~~----GvP~v~~P~~~DQ~~na~-----~v~~~~G~G~~l~~~~~~~ 395 (464)
....--+.+.|..+++ +|.--|.-.+.+.++. |+|+-+ .|.+..+. .+ ++-++-+.+...
T Consensus 79 ~i~~~~~~~dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv-~rg~l~iaIST~---- 147 (223)
T 3dfz_A 79 VKRKKVGEEDLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQF-SRGRLSLAISTD---- 147 (223)
T ss_dssp EECSCCCGGGSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEE-EETTEEEEEECT----
T ss_pred EEECCCCHhHhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEE-EeCCEEEEEECC----
Confidence 3222222344555565 7776676555555443 444322 34433332 12 222233333322
Q ss_pred CCCCCCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 048562 396 WSTEPSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKN 439 (464)
Q Consensus 396 ~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~ 439 (464)
|.. -.-+..|++.|.+++. +....+.+.+.++++++++
T Consensus 148 -G~s---P~la~~iR~~ie~~lp--~~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 148 -GAS---PLLTKRIKEDLSSNYD--ESYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp -TSC---HHHHHHHHHHHHHHSC--THHHHHHHHHHHHHHHHHH
T ss_pred -CCC---cHHHHHHHHHHHHHcc--HHHHHHHHHHHHHHHHHHH
Confidence 111 1334568888888884 3344788888888888874
No 115
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=58.67 E-value=8.3 Score=31.58 Aligned_cols=35 Identities=9% Similarity=0.080 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+..|++++.. |++- ..+++.|.++||+|+++...
T Consensus 1 ~~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 34678888843 5444 67899999999999999875
No 116
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=57.09 E-value=71 Score=25.63 Aligned_cols=113 Identities=11% Similarity=0.102 Sum_probs=60.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhh--hhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSF--QKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSA 84 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (464)
..++++++.+. =+.|++.+++.|.++|.+|+++ .....+.+ ...+.+. +..+.+...... ......
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~~~~~~~~~el~~l---~~~~~~~~~~~~------~~~~~~ 85 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTFEPMVILKEELEKA---VTRHIVEPVPLN------PNQDFL 85 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEEGGGCCSHHHHHTT---SSEEEEEEECCC------TTSCHH
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCCHHHhhHHHHHHHH---HhheEEEEeecc------cccCCC
Confidence 46788887654 3799999999999999999998 54433221 2222111 112322221100 000000
Q ss_pred cHHH-HHhhhHHHHHHhhhhCCCC-EEEeCCCch--hhHHHHHHcCCCeEE
Q 048562 85 TPRT-DTSMLQEPLKSLLVDSRPD-CIVHDMFHH--WSADVINSMNIPRIV 131 (464)
Q Consensus 85 ~~~~-~~~~~~~~l~~~l~~~~pD-~Vi~D~~~~--~~~~~A~~~giP~v~ 131 (464)
.-.. ......+.+.+++.+.+.| +.+|-+-.. ....+++.+|+|..-
T Consensus 86 d~~~g~~G~v~~~l~~~~~~~~~~~vy~CGP~~Mm~av~~~l~~~~~~~~~ 136 (142)
T 3lyu_A 86 ANMKNVSQRLKEKVRELLESEDWDLVFMVGPVGDQKQVFEVVKEYGVPMLE 136 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCSEEEEESCHHHHHHHHHHHHHHTCCBC-
T ss_pred CCCCCCccchhHHHHHhcccCCCCEEEEECCHHHHHHHHHHHHHcCCchhh
Confidence 0011 1111234455666555666 567776433 566688888998754
No 117
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=56.54 E-value=35 Score=33.80 Aligned_cols=34 Identities=6% Similarity=0.147 Sum_probs=28.2
Q ss_pred HHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEE
Q 048562 96 PLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVF 132 (464)
Q Consensus 96 ~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~ 132 (464)
.+.+++++.+||++|.... ...+|+++|||++.+
T Consensus 366 ~le~~i~~~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARAGQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHHTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHhcCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 4667888899999999854 456899999999986
No 118
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=56.41 E-value=15 Score=33.05 Aligned_cols=41 Identities=12% Similarity=0.195 Sum_probs=29.5
Q ss_pred CCCcEEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 5 SSPVEMFFFPYVGGG-----------HQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 5 ~~~~~vl~~~~~~~G-----------H~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
|.|+|||++.....+ ...=++.....|.+.|++|+++++..
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 347789988875322 23457777889999999999999753
No 119
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=56.37 E-value=56 Score=32.97 Aligned_cols=95 Identities=12% Similarity=0.156 Sum_probs=53.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchh----hhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHAL----SFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDM 82 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (464)
..|++++. .-.-.+++++.|.+-|.+|..+....... .+...... .+.|.+..+..-
T Consensus 364 GKrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~~~------------- 424 (523)
T 3u7q_B 364 GKRFALWG-----DPDFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAA-SPYGKNATVYIG------------- 424 (523)
T ss_dssp TCEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHT-SGGGTTCEEEES-------------
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHHHHHhh-ccCCCCcEEEEC-------------
Confidence 35677762 33456788888888999988876543322 12222110 000111111110
Q ss_pred cccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHc-------CCCeEEE
Q 048562 83 SATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSM-------NIPRIVF 132 (464)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~-------giP~v~~ 132 (464)
.-...+.+++++.+||+||.....- .+|+.+ |||++.+
T Consensus 425 ---------~D~~~l~~~i~~~~pDLlig~s~~k---~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 425 ---------KDLWHLRSLVFTDKPDFMIGNSYGK---FIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp ---------CCHHHHHHHHHHTCCSEEEECTTHH---HHHHHHHHHCGGGCCCEEEC
T ss_pred ---------CCHHHHHHHHHhcCCCEEEECccHH---HHHHHhhcccccCCCceEEe
Confidence 0134566778889999999996542 345544 9999986
No 120
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=55.84 E-value=14 Score=33.47 Aligned_cols=45 Identities=13% Similarity=0.054 Sum_probs=38.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhh
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSF 50 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 50 (464)
+..+|++.+.++..|-....-++..|..+|++|.+++.....+.+
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l 166 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEV 166 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHH
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 467899999999999999999999999999999988765443333
No 121
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=55.78 E-value=22 Score=32.02 Aligned_cols=38 Identities=8% Similarity=-0.006 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCc-----------cCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGG-----------GHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~-----------GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+|||++..... -+..=++.-...|.+.|++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 678999887632 23555778889999999999999975
No 122
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=55.06 E-value=11 Score=35.71 Aligned_cols=41 Identities=12% Similarity=0.070 Sum_probs=30.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhh
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQ 51 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~ 51 (464)
+++||+++-.|..| ..+|..|++.||+|+++......+.+.
T Consensus 2 ~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~ 42 (335)
T 3ghy_A 2 SLTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQ 42 (335)
T ss_dssp CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHH
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHH
Confidence 46789999877666 467899999999999998753333333
No 123
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=54.88 E-value=73 Score=29.56 Aligned_cols=40 Identities=13% Similarity=0.219 Sum_probs=28.7
Q ss_pred HHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 96 PLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 96 ~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
.+.+.|++.+||++|+=.+.. ....+-......++-++++
T Consensus 66 ~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 66 LWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp HHHHHHHHTCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 456778889999999976643 4555666666778888665
No 124
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=54.74 E-value=1.3e+02 Score=27.74 Aligned_cols=101 Identities=13% Similarity=0.057 Sum_probs=57.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcc--hhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKH--ALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDM 82 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (464)
|++++|++.. +.|.+- ..|++.|.++||+|+.++-... .+..... .... ..++.++..+.
T Consensus 8 M~~~~IlVtG--atG~iG--~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~l~--~~~v~~~~~Dl----------- 69 (346)
T 3i6i_A 8 SPKGRVLIAG--ATGFIG--QFVATASLDAHRPTYILARPGPRSPSKAKIF-KALE--DKGAIIVYGLI----------- 69 (346)
T ss_dssp ---CCEEEEC--TTSHHH--HHHHHHHHHTTCCEEEEECSSCCCHHHHHHH-HHHH--HTTCEEEECCT-----------
T ss_pred CCCCeEEEEC--CCcHHH--HHHHHHHHHCCCCEEEEECCCCCChhHHHHH-HHHH--hCCcEEEEeec-----------
Confidence 4456776664 344333 5688999999999999887541 1221110 0000 12555555421
Q ss_pred cccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch------hhHHHHHHcC-CCeEEE
Q 048562 83 SATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH------WSADVINSMN-IPRIVF 132 (464)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~------~~~~~A~~~g-iP~v~~ 132 (464)
.. ...+.+.+++.++|+||.-.... ....+|+..| ++.+.+
T Consensus 70 ~d---------~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 70 NE---------QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp TC---------HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred CC---------HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 10 34455666667899999865431 3556777778 887764
No 125
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=54.49 E-value=26 Score=30.98 Aligned_cols=22 Identities=18% Similarity=0.202 Sum_probs=17.9
Q ss_pred hhHHHHHHhhhhCCCCEEEeCC
Q 048562 92 MLQEPLKSLLVDSRPDCIVHDM 113 (464)
Q Consensus 92 ~~~~~l~~~l~~~~pD~Vi~D~ 113 (464)
.....+.++|++.+||+|+.-.
T Consensus 82 ~~~~~l~~~ir~~~P~~V~t~~ 103 (227)
T 1uan_A 82 EQRLKLAQALRRLRPRVVFAPL 103 (227)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCC
Confidence 4567888899999999999743
No 126
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=54.46 E-value=43 Score=32.79 Aligned_cols=100 Identities=10% Similarity=0.023 Sum_probs=54.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcc
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSA 84 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (464)
|.|.|||++.. |. -.+.+++++++.|++|..+.+........... .. ..+.++. ......+.
T Consensus 4 m~~~kiLI~g~---g~--~a~~i~~aa~~~G~~~v~v~~~~~~~~~~~~~-------ad-~~~~i~~-----~~~~~~~~ 65 (446)
T 3ouz_A 4 MEIKSILIANR---GE--IALRALRTIKEMGKKAICVYSEADKDALYLKY-------AD-ASICIGK-----ARSSESYL 65 (446)
T ss_dssp TCCCEEEECCC---HH--HHHHHHHHHHHTTCEEEEEEEGGGTTCTHHHH-------SS-EEEEEEC-----CTTTTGGG
T ss_pred cccceEEEECC---CH--HHHHHHHHHHHcCCEEEEEEcCcccccchHhh-------CC-EEEEcCC-----CCcccccc
Confidence 44678888543 32 56789999999999998886543322111110 01 2233320 00001111
Q ss_pred cHHHHHhhhHHHHHHhhhhCCCCEEEeCC--Cc--hhhHHHHHHcCCCeE
Q 048562 85 TPRTDTSMLQEPLKSLLVDSRPDCIVHDM--FH--HWSADVINSMNIPRI 130 (464)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~--~~--~~~~~~A~~~giP~v 130 (464)
-.+.+.+++++.++|+|+... .. .......+.+|+|++
T Consensus 66 --------d~~~l~~~~~~~~~d~i~p~~g~~~e~~~~~~~~~~~g~~~~ 107 (446)
T 3ouz_A 66 --------NIPAIIAAAEIAEADAIFPGYGFLSENQNFVEICAKHNIKFI 107 (446)
T ss_dssp --------CHHHHHHHHHHHTCSEEECCSSTTTTCHHHHHHHHHTTCEES
T ss_pred --------CHHHHHHHHHHhCcCEEEECCcccccCHHHHHHHHHCCCceE
Confidence 135667777778899999532 21 223445666788864
No 127
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=53.64 E-value=1.2e+02 Score=27.84 Aligned_cols=34 Identities=15% Similarity=0.187 Sum_probs=20.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEe
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIIT 42 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~ 42 (464)
+++++||+.. +.|.+- ..|++.|.++|+++.+++
T Consensus 22 ~~~~~vlVtG--atG~iG--~~l~~~L~~~g~~~~v~~ 55 (346)
T 4egb_A 22 SNAMNILVTG--GAGFIG--SNFVHYMLQSYETYKIIN 55 (346)
T ss_dssp --CEEEEEET--TTSHHH--HHHHHHHHHHCTTEEEEE
T ss_pred cCCCeEEEEC--CccHHH--HHHHHHHHhhCCCcEEEE
Confidence 4567776654 445443 478999999995544443
No 128
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=53.34 E-value=23 Score=28.37 Aligned_cols=46 Identities=7% Similarity=-0.014 Sum_probs=32.6
Q ss_pred CcEEEEEcCC---CccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhh
Q 048562 7 PVEMFFFPYV---GGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQK 52 (464)
Q Consensus 7 ~~~vl~~~~~---~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 52 (464)
+.|++|+... +.......+.+|...++.||+|+++-.......+.+
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l~k 63 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLLDX 63 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGGBH
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHHhh
Confidence 4566555543 456677888999999999999998877655444443
No 129
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=52.77 E-value=14 Score=33.82 Aligned_cols=41 Identities=17% Similarity=0.194 Sum_probs=31.4
Q ss_pred CCCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 5 SSPVEMFFFPY--VGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 5 ~~~~~vl~~~~--~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
|+|+|++.+.. ++-|=..-...||..|+++|++|.++=...
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 34666666553 588999999999999999999999986654
No 130
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=52.63 E-value=16 Score=33.28 Aligned_cols=35 Identities=20% Similarity=0.235 Sum_probs=26.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+|++||+.. + |. --..|++.|.++||+|+.++-.
T Consensus 1 M~~~~ilVtG--a-G~--iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAG--C-GD--LGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEEC--C-SH--HHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEEC--C-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 3467888873 4 63 3457899999999999988764
No 131
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=52.18 E-value=53 Score=31.16 Aligned_cols=39 Identities=15% Similarity=0.185 Sum_probs=32.4
Q ss_pred cEEEEE-cCCCccCHHHHHHHHHHHH--hCCCcEEEEeCCcc
Q 048562 8 VEMFFF-PYVGGGHQIPMVDIARIFA--AHGAKSTIITSPKH 46 (464)
Q Consensus 8 ~~vl~~-~~~~~GH~~p~l~la~~L~--~rGh~Vt~~~~~~~ 46 (464)
++|+|+ .-+|-|-..-...+|..|+ ++|++|.++.....
T Consensus 18 ~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 18 LKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 455555 4569999999999999999 89999999988743
No 132
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=51.87 E-value=7.6 Score=36.14 Aligned_cols=39 Identities=13% Similarity=-0.009 Sum_probs=26.8
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+...+++||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 1 M~~~~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp ------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCCCCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 5555667899999776555 46899999999999988543
No 133
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=51.84 E-value=9.9 Score=30.23 Aligned_cols=36 Identities=19% Similarity=0.106 Sum_probs=25.8
Q ss_pred HHhhhhCCCCEEEeCCCch--hhHHHHHH---cCCCeEEEe
Q 048562 98 KSLLVDSRPDCIVHDMFHH--WSADVINS---MNIPRIVFN 133 (464)
Q Consensus 98 ~~~l~~~~pD~Vi~D~~~~--~~~~~A~~---~giP~v~~~ 133 (464)
.+++++.+||+||.|...+ .+..+++. .++|.|.++
T Consensus 46 l~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 46 LDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 3566778999999998765 35555543 578877764
No 134
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=51.36 E-value=25 Score=26.94 Aligned_cols=39 Identities=26% Similarity=0.336 Sum_probs=26.6
Q ss_pred HHhhhhCCCCEEEeCCCch--hhHHHHHHc-------CCCeEEEeccc
Q 048562 98 KSLLVDSRPDCIVHDMFHH--WSADVINSM-------NIPRIVFNGNC 136 (464)
Q Consensus 98 ~~~l~~~~pD~Vi~D~~~~--~~~~~A~~~-------giP~v~~~~~~ 136 (464)
.+.+++.+||+||.|...+ .+..+++.+ ++|.|.++...
T Consensus 39 l~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 39 LEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 3456678899999997655 355555433 57888876543
No 135
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=51.14 E-value=14 Score=30.30 Aligned_cols=46 Identities=11% Similarity=-0.034 Sum_probs=34.4
Q ss_pred CcEEEEEc-CCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhh
Q 048562 7 PVEMFFFP-YVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQK 52 (464)
Q Consensus 7 ~~~vl~~~-~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 52 (464)
+.|++++. .+..-.+++.+.+|...++.|++|+++-+......+.+
T Consensus 7 ~~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 7 KKKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp CCEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred cCCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 34554444 44677788999999999999999999988766555554
No 136
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=50.71 E-value=18 Score=29.06 Aligned_cols=38 Identities=16% Similarity=0.338 Sum_probs=27.7
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHHc-------CCCeEEEeccc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINSM-------NIPRIVFNGNC 136 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~~-------giP~v~~~~~~ 136 (464)
+.+++.+||+||.|...+ -+..+++.. ++|.|.++...
T Consensus 51 ~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 51 PMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 455667899999998876 466666653 58888876554
No 137
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=50.53 E-value=22 Score=31.68 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=35.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
+.+|++..-||-|-..-++.+|..|+++|++|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 678899999999999999999999999999998877654
No 138
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=50.28 E-value=23 Score=33.48 Aligned_cols=73 Identities=11% Similarity=-0.003 Sum_probs=52.9
Q ss_pred CCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeec
Q 048562 265 LSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFM 344 (464)
Q Consensus 265 ~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~I 344 (464)
...+....+.+++.+...+.||.+.+. .. -.++.++++...+-++|+. ||
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG----------~g------------------~~rlL~~lD~~~i~~~PK~--~~ 111 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGG----------YN------------------SNGLLKYLDYDLIRENPKF--FC 111 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCC----------SC------------------GGGGGGGCCHHHHHTSCCE--EE
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccc----------cc------------------HHHHHhhcChhHHHhCCeE--EE
Confidence 346678889999999999999998776 11 1234566666666666766 88
Q ss_pred cccchhhHHHHHH--cCCceeeccc
Q 048562 345 THCGWNSTLESVS--AGVPMVTWPI 367 (464)
Q Consensus 345 tHGG~~s~~Eal~--~GvP~v~~P~ 367 (464)
-......+.-+++ .|+..+--|.
T Consensus 112 GySDiTaL~~al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 112 GYSDITALNNAIYTKTGLVTYSGPH 136 (331)
T ss_dssp ECGGGHHHHHHHHHHHCBCEEECCC
T ss_pred EecchHHHHHHHHHhhCCcEEEccc
Confidence 8888888887776 4777776665
No 139
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=49.82 E-value=1e+02 Score=26.66 Aligned_cols=123 Identities=11% Similarity=0.116 Sum_probs=68.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHH-HhCCCcEEEEeCCcchhhhhhhhhhccCCCC---------CeEEEEecCCCCCCCC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIF-AAHGAKSTIITSPKHALSFQKSINRNQQSGL---------PITIKTLHLPDDIEIP 78 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L-~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~---------~~~~~~~~~~~~~~~~ 78 (464)
-+++...|+.|-..-++.+|... .+.|..|.|++.....+.+....... +. .+.+.... .......
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~-~~~~~~~ 107 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLRREMASF---GWDFEKYEKEGKIAIVDGV-SSVVGLP 107 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHHHHTT---TCCHHHHHHTTSEEEEC----------
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHHHHHHHc---CCChHHHHhcCcchhhhhH-HHHhhcc
Confidence 36777778999999999988764 55688999998876655544332211 11 12222110 0000000
Q ss_pred CCCCcccH-HHHHhhhHHHHHHhhhhCCCCEEEeCCCch----------------hhHHHHHHcCCCeEEEecc
Q 048562 79 DTDMSATP-RTDTSMLQEPLKSLLVDSRPDCIVHDMFHH----------------WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 79 ~~~~~~~~-~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~----------------~~~~~A~~~giP~v~~~~~ 135 (464)
....+... ......+...+.+.++..++++||.|.... ....+|+.+|+|.+.++..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vviD~~~~l~~~~~~~~~~~~~~~~L~~~a~~~~i~vi~~~q~ 181 (251)
T 2zts_A 108 SEEKFVLEDRFNVDNFLRYIYRVVKAINAKRLVIDSIPSIALRLEEERKIREVLLKLNTILLEMGVTTILTTEA 181 (251)
T ss_dssp ----------CCHHHHHHHHHHHHHHTTCSEEEEECHHHHHHHSSSGGGHHHHHHHHHHHHHHHCCEEEEEECC
T ss_pred cchhccccccccHHHHHHHHHHHHHhcCCcEEEEEcHHHHhhhccChHHHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 00000000 001223456677777889999999997632 2345677889999888543
No 140
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=49.76 E-value=21 Score=27.49 Aligned_cols=44 Identities=5% Similarity=0.003 Sum_probs=30.0
Q ss_pred CcEEEEEcCC---CccCHHHHHHHHHHHHhC-CC-cEEEEeCCcchhhh
Q 048562 7 PVEMFFFPYV---GGGHQIPMVDIARIFAAH-GA-KSTIITSPKHALSF 50 (464)
Q Consensus 7 ~~~vl~~~~~---~~GH~~p~l~la~~L~~r-Gh-~Vt~~~~~~~~~~~ 50 (464)
|+|++++-.. +.......+.+|..+.+. || +|.++-........
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 3455544433 345566789999999999 99 99888776554433
No 141
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=49.73 E-value=1.2e+02 Score=28.71 Aligned_cols=88 Identities=9% Similarity=0.064 Sum_probs=51.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCccc
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSAT 85 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (464)
+++||+++..+ .....+++++.+.||+|..+............ . .++.++ .. .
T Consensus 10 ~~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~---------d-~~~~~~-----------~~-d 62 (391)
T 1kjq_A 10 AATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRYADAPAMHVA---------H-RSHVIN-----------ML-D 62 (391)
T ss_dssp TCCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESSTTCGGGGGS---------S-EEEECC-----------TT-C
T ss_pred CCCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECCCCCchhhhc---------c-ceEECC-----------CC-C
Confidence 46789998543 24577899999999999888765332111110 1 222222 00 0
Q ss_pred HHHHHhhhHHHHHHhhhhCCCCEEEeCCCch--hhHHHHHHcCCC
Q 048562 86 PRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH--WSADVINSMNIP 128 (464)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~--~~~~~A~~~giP 128 (464)
.+.+.+++++.++|+|+...-.. .....++.+|++
T Consensus 63 --------~~~l~~~~~~~~~d~v~~~~e~~~~~~~~~l~~~gi~ 99 (391)
T 1kjq_A 63 --------GDALRRVVELEKPHYIVPEIEAIATDMLIQLEEEGLN 99 (391)
T ss_dssp --------HHHHHHHHHHHCCSEEEECSSCSCHHHHHHHHHTTCE
T ss_pred --------HHHHHHHHHHcCCCEEEECCCcCCHHHHHHHHhCCCC
Confidence 13555666677899999865332 233345667883
No 142
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=49.61 E-value=30 Score=30.89 Aligned_cols=40 Identities=8% Similarity=0.105 Sum_probs=29.7
Q ss_pred CCcEEEEEcCCCc-----------cCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 6 SPVEMFFFPYVGG-----------GHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 6 ~~~~vl~~~~~~~-----------GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
.|+|||++..... -...=+....+.|.+.|++|+++++..
T Consensus 2 ~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 2 APKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3568988886422 244567777888999999999998764
No 143
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=49.53 E-value=64 Score=32.50 Aligned_cols=96 Identities=16% Similarity=0.249 Sum_probs=55.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhh---ccCCCCCeEEEEecCCCCCCCCCCCCc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINR---NQQSGLPITIKTLHLPDDIEIPDTDMS 83 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (464)
..|++++. .-.-.++|++.|.+.|-+|..+......+...+.... ..+.+.+..+..=
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~~v~~~-------------- 420 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVFIN-------------- 420 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEEES--------------
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCCEEEEC--------------
Confidence 45777773 3345678888899999999876554333222221110 0000111111110
Q ss_pred ccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHc-------CCCeEEE
Q 048562 84 ATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSM-------NIPRIVF 132 (464)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~-------giP~v~~ 132 (464)
. -...+.+++++.+||++|.+.. ...+|+.+ |+|++.+
T Consensus 421 ~--------d~~~l~~~i~~~~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 421 C--------DLWHFRSLMFTRQPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp C--------CHHHHHHHHHHHCCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred C--------CHHHHHHHHhhcCCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 0 1334566777779999999853 45677778 9999876
No 144
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=49.06 E-value=1e+02 Score=27.12 Aligned_cols=39 Identities=8% Similarity=-0.055 Sum_probs=32.4
Q ss_pred CcEEEEEcCC-CccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 7 PVEMFFFPYV-GGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 7 ~~~vl~~~~~-~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
+..+.++..+ +.|=..-++.++..+..+|..|.++.+..
T Consensus 11 ~G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 11 IGWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp CCEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CcEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 4456666666 99999999999999999999999887654
No 145
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=48.92 E-value=15 Score=33.62 Aligned_cols=33 Identities=15% Similarity=0.305 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
||||+. |+.|.+- ..|++.|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 567655 3455544 45789999999999998754
No 146
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=48.42 E-value=1.2e+02 Score=25.55 Aligned_cols=148 Identities=14% Similarity=0.147 Sum_probs=80.3
Q ss_pred CcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccH
Q 048562 252 NSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQ 331 (464)
Q Consensus 252 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq 331 (464)
+|+|-|-+||.. +....+++.+.|++++..+-..+-.- ++ .|+.+.+ |+-.
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA------HR--------tp~~l~~-------------~~~~ 72 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HR--------TPDYMFE-------------YAET 72 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TT--------SHHHHHH-------------HHHH
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc------cc--------ChHHHHH-------------HHHH
Confidence 568888899987 56678888899999888766665443 21 3432221 1100
Q ss_pred HHHhcccCceeeccccch----hhHHHHHHcCCceeeccccc---ccchhHHHHHhhhcceEEeccccccCCCCCCCCcc
Q 048562 332 LLILEHTAVGGFMTHCGW----NSTLESVSAGVPMVTWPITA---EQFSNEKLISDVLKIGVKVGSVNWVSWSTEPSAAV 404 (464)
Q Consensus 332 ~~lL~~~~~~~~ItHGG~----~s~~Eal~~GvP~v~~P~~~---DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~ 404 (464)
...-.++++|.=.|. -++.-+ ..-+|+|.+|... +-.+...-++ +.--|+-+-.-. .+. .+..
T Consensus 73 ---a~~~g~~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSiv-QMP~GvpVaTva---ig~--~ga~ 142 (181)
T 4b4k_A 73 ---ARERGLKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVA---IGK--AGST 142 (181)
T ss_dssp ---TTTTTCCEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHH-TCCTTCCCEECC---SSH--HHHH
T ss_pred ---HHhcCceEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHH-hCCCCCceEEEe---cCC--ccHH
Confidence 011123336655553 344444 4568999999854 3344444554 555555443220 000 0012
Q ss_pred ChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhc
Q 048562 405 GRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEE 443 (464)
Q Consensus 405 ~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~ 443 (464)
++.-++..|-. +.|+ .++++.+.+++..++.+++
T Consensus 143 NAallA~qILa-~~d~----~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 143 NAGLLAAQILG-SFHD----DIHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHHHHHHT-TTCH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-cCCH----HHHHHHHHHHHHHHHHHHH
Confidence 23334433332 3444 7888888888887765443
No 147
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=48.19 E-value=12 Score=30.04 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
+|.||+++.. |.+ -..+++.|.++||+|+++...
T Consensus 5 ~~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 4678888865 433 457899999999999988764
No 148
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=47.55 E-value=98 Score=26.50 Aligned_cols=39 Identities=13% Similarity=-0.005 Sum_probs=29.5
Q ss_pred HHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEEeccc
Q 048562 95 EPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVFNGNC 136 (464)
Q Consensus 95 ~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~~~ 136 (464)
....+.+++..+|+||.|.. .+.+|+++|+|.+.+.++.
T Consensus 132 ~~~i~~l~~~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 132 TTLISKVKTENIKIVVSGKT---VTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp HHHHHHHHHTTCCEEEECHH---HHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHHHCCCeEEECCHH---HHHHHHHcCCcEEEEecCH
Confidence 33445566789999999833 5778999999999987643
No 149
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=47.41 E-value=65 Score=29.91 Aligned_cols=105 Identities=9% Similarity=0.085 Sum_probs=62.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCc--chhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPK--HALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDT 80 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (464)
.+|+||+++..+. || .+..|..+-.+- +.+|..+.++. .....++ .++.+..++..
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~---------~gIp~~~~~~~-------- 162 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEW---------HDIPYYHVPVD-------- 162 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHT---------TTCCEEECCCC--------
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHH---------cCCCEEEcCCC--------
Confidence 4578998888765 54 455555554432 47888776542 2222222 25655555411
Q ss_pred CCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 81 DMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
.. .......++.+.|++.+||+||.=.+.- ....+...+.-.+|-+.++
T Consensus 163 -~~-----~r~~~~~~~~~~l~~~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 163 -PK-----DKEPAFAEVSRLVGHHQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp -SS-----CCHHHHHHHHHHHHHTTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred -cC-----CHHHHHHHHHHHHHHhCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 00 0112356778889999999999987653 4445556666667777443
No 150
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=47.33 E-value=20 Score=29.31 Aligned_cols=35 Identities=14% Similarity=0.196 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
...++|+++.. |.+- ..+++.|.++|++|+++...
T Consensus 17 ~~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 17 QKSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 45678888854 4333 55789999999999988764
No 151
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=46.59 E-value=73 Score=28.24 Aligned_cols=40 Identities=20% Similarity=0.053 Sum_probs=24.4
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|++..+. |+++++.++.| --..+|+.|+++|++|.++.-.
T Consensus 1 M~~~~~~-k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 1 MSLTPRN-ATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp ----CCS-CEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcCCCC-CEEEEECCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 5543433 45555554432 3468899999999999887654
No 152
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=46.55 E-value=18 Score=29.29 Aligned_cols=43 Identities=9% Similarity=0.086 Sum_probs=27.9
Q ss_pred CcEEEEEc-CCCccC--HHHHHHHHHHHHhCCCcEEEEeCCcchhh
Q 048562 7 PVEMFFFP-YVGGGH--QIPMVDIARIFAAHGAKSTIITSPKHALS 49 (464)
Q Consensus 7 ~~~vl~~~-~~~~GH--~~p~l~la~~L~~rGh~Vt~~~~~~~~~~ 49 (464)
|.|++|+- .+-+|+ ..-.+.+|..+.+.||+|.++-.......
T Consensus 5 Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV~~ 50 (136)
T 2hy5_B 5 VKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVYQ 50 (136)
T ss_dssp CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGGG
T ss_pred hhEEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHH
Confidence 33454443 334454 34468889999999999998876654433
No 153
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=45.93 E-value=1.9e+02 Score=27.88 Aligned_cols=87 Identities=13% Similarity=0.019 Sum_probs=51.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcccH
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSATP 86 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (464)
++||+++..+ .....+++++.++||+|..+............ . ..+..+ .. .
T Consensus 19 ~~~ili~g~g-----~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~~a---------d-~~~~~~-----------~~-d- 70 (433)
T 2dwc_A 19 AQKILLLGSG-----ELGKEIAIEAQRLGVEVVAVDRYANAPAMQVA---------H-RSYVGN-----------MM-D- 70 (433)
T ss_dssp CCEEEEESCS-----HHHHHHHHHHHHTTCEEEEEESSTTCHHHHHS---------S-EEEESC-----------TT-C-
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEECCCCChhhhhc---------c-eEEECC-----------CC-C-
Confidence 5689988542 24567899999999999888765432211111 1 222222 00 0
Q ss_pred HHHHhhhHHHHHHhhhhCCCCEEEeCCCch--hhHHHHHHcCCC
Q 048562 87 RTDTSMLQEPLKSLLVDSRPDCIVHDMFHH--WSADVINSMNIP 128 (464)
Q Consensus 87 ~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~--~~~~~A~~~giP 128 (464)
.+.+.+++++.++|+|+...-.. .....++.+|++
T Consensus 71 -------~~~l~~~~~~~~~d~V~~~~e~~~~~~~~~l~~~gi~ 107 (433)
T 2dwc_A 71 -------KDFLWSVVEREKPDAIIPEIEAINLDALFEFEKDGYF 107 (433)
T ss_dssp -------HHHHHHHHHHHCCSEEEECSSCSCHHHHHHHHHTTCC
T ss_pred -------HHHHHHHHHHcCCCEEEECcccCCHHHHHHHHhcCCe
Confidence 13555666677899999865432 233445677883
No 154
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=45.43 E-value=29 Score=28.25 Aligned_cols=97 Identities=11% Similarity=0.093 Sum_probs=58.5
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcccHHHHH
Q 048562 11 FFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSATPRTDT 90 (464)
Q Consensus 11 l~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (464)
+|++.. ..+=.-++.+|+.|.+.|+++. +|. .....++.. |..++.+.-. +++ . +
T Consensus 27 vliSv~-d~dK~~l~~~a~~l~~lGf~i~-AT~-GTa~~L~~~-------Gi~v~~v~k~-~eg------g------~-- 81 (143)
T 2yvq_A 27 ILIGIQ-QSFRPRFLGVAEQLHNEGFKLF-ATE-ATSDWLNAN-------NVPATPVAWP-SQE------G------Q-- 81 (143)
T ss_dssp EEEECC-GGGHHHHHHHHHHHHTTTCEEE-EEH-HHHHHHHHT-------TCCCEEECCG-GGC----------------
T ss_pred EEEEec-ccchHHHHHHHHHHHHCCCEEE-ECc-hHHHHHHHc-------CCeEEEEEec-cCC------C------c--
Confidence 444442 3456679999999999999843 443 344555554 3333332211 000 0 0
Q ss_pred hhhHHHHHHhhhhCCCCEEEeCCCc--------hhhHHHHHHcCCCeEEE
Q 048562 91 SMLQEPLKSLLVDSRPDCIVHDMFH--------HWSADVINSMNIPRIVF 132 (464)
Q Consensus 91 ~~~~~~l~~~l~~~~pD~Vi~D~~~--------~~~~~~A~~~giP~v~~ 132 (464)
....+.+.+++++.+.|+||.-..- ......|-.+|||+++.
T Consensus 82 ~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 82 NPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp ---CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred ccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 0001457788999999999996533 13566788899999874
No 155
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=45.35 E-value=1.6e+02 Score=28.81 Aligned_cols=42 Identities=5% Similarity=-0.084 Sum_probs=35.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhh
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSF 50 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 50 (464)
-+++...|+.|-..-++.+|...+.+|..|.|++.+...+.+
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql 240 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKEN 240 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHH
Confidence 467777889999999999999999999999999987655443
No 156
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=45.27 E-value=24 Score=30.08 Aligned_cols=40 Identities=25% Similarity=0.289 Sum_probs=26.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHH-HHHHHHhCCCcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVD-IARIFAAHGAKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~-la~~L~~rGh~Vt~~~~~ 44 (464)
|.|+||+++-....|+..-+.. +++.|.+.|++|.++--.
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 4577888877766777665443 566777789999877543
No 157
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=44.96 E-value=33 Score=31.80 Aligned_cols=40 Identities=5% Similarity=0.017 Sum_probs=30.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhh
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKS 53 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 53 (464)
+||+++-.|+.|- .+|..|.+.||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAGN 42 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHHT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHhC
Confidence 5799998888874 46889999999999998765 3444443
No 158
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=44.66 E-value=1.1e+02 Score=28.09 Aligned_cols=105 Identities=12% Similarity=0.139 Sum_probs=61.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCc--c-hhhhhhhhhhccCCCCCeEEEEecCCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPK--H-ALSFQKSINRNQQSGLPITIKTLHLPDDIEIPD 79 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~--~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 79 (464)
.+|+||+++..+. || .+..|..+-.+- ..+|..+.++. . .+..++ .++.+..+|.. .
T Consensus 87 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~---------~gIp~~~~~~~------~ 148 (288)
T 3obi_A 87 ETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDF---------GDIPFYHFPVN------K 148 (288)
T ss_dssp TSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTT---------TTCCEEECCCC------T
T ss_pred CCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHH---------cCCCEEEeCCC------c
Confidence 4578998888754 54 344555554432 24777666543 1 122121 35666665421 0
Q ss_pred CCCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 80 TDMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
. .......++.+.|++.++|+||.=.+.- ....+...+.-.++-++++
T Consensus 149 ----~----~r~~~~~~~~~~l~~~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 149 ----D----TRRQQEAAITALIAQTHTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp ----T----THHHHHHHHHHHHHHHTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred ----c----cHHHHHHHHHHHHHhcCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 0 1122356778889999999999987653 4555666666677877433
No 159
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=43.61 E-value=15 Score=33.92 Aligned_cols=34 Identities=12% Similarity=0.114 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
+|+||+|+..|..| ..+|..|.++||+|+++...
T Consensus 2 ~~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 2 NAMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 36789999776555 36789999999999998753
No 160
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=43.34 E-value=1.9e+02 Score=26.51 Aligned_cols=108 Identities=13% Similarity=0.057 Sum_probs=62.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDM 82 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (464)
.+|+||+++..+. || .+..|.++-... ..+|..+.++.... +... + ...++.+..+|..
T Consensus 86 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~~---A--~~~gIp~~~~~~~---------- 146 (287)
T 3nrb_A 86 TDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPRE-ALSV---S--LVGDIPFHYLPVT---------- 146 (287)
T ss_dssp TCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGG-GCCC---C--CCTTSCEEECCCC----------
T ss_pred CCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHH-HHHH---H--HHcCCCEEEEecc----------
Confidence 4578998888755 44 444555554443 36777776543211 1111 0 1125555555410
Q ss_pred cccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 83 SATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
. ........++.+.|++.++|+||.=.+.- ....+.+.+.-.+|-++++
T Consensus 147 ~----~~r~~~~~~~~~~l~~~~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 147 P----ATKAAQESQIKNIVTQSQADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp G----GGHHHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred C----cchhhHHHHHHHHHHHhCCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 0 11122356778889999999999987753 4555666666777877443
No 161
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=43.23 E-value=31 Score=33.79 Aligned_cols=91 Identities=8% Similarity=0.012 Sum_probs=51.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCC-cEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcc
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGA-KSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSA 84 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh-~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (464)
.|||||++..+++-| +||+.|.+.++ +-.++. +.+....... ....+.+. . .
T Consensus 2 ~~mkvlviG~ggre~-----ala~~l~~s~~v~~v~~~-pgn~g~~~~~---------~~~~~~~~-----------~-~ 54 (431)
T 3mjf_A 2 NAMNILIIGNGGREH-----ALGWKAAQSPLADKIYVA-PGNAGTALEP---------TLENVDIA-----------A-T 54 (431)
T ss_dssp -CEEEEEEECSHHHH-----HHHHHHTTCTTEEEEEEE-ECCHHHHHCT---------TCEECCCC-----------T-T
T ss_pred CCcEEEEECCCHHHH-----HHHHHHHhCCCCCEEEEE-CCCHHHhhhc---------ccceecCC-----------c-C
Confidence 478999998876544 68999998865 323333 3332221110 11111111 0 0
Q ss_pred cHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch---hhHHHHHHcCCCeEE
Q 048562 85 TPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH---WSADVINSMNIPRIV 131 (464)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~---~~~~~A~~~giP~v~ 131 (464)
-.+.+.+++++.++|+||...-.. ......+.+|+|++.
T Consensus 55 --------d~~~l~~~a~~~~id~vv~g~e~~l~~~~~~~l~~~Gi~~~G 96 (431)
T 3mjf_A 55 --------DIAGLLAFAQSHDIGLTIVGPEAPLVIGVVDAFRAAGLAIFG 96 (431)
T ss_dssp --------CHHHHHHHHHHTTEEEEEECSHHHHHTTHHHHHHHTTCCEES
T ss_pred --------CHHHHHHHHHHhCcCEEEECCchHHHHHHHHHHHhcCCCeeC
Confidence 135566777788999999764322 245566678999873
No 162
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=43.13 E-value=1.3e+02 Score=24.92 Aligned_cols=137 Identities=11% Similarity=0.055 Sum_probs=75.5
Q ss_pred cEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHH
Q 048562 253 SVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQL 332 (464)
Q Consensus 253 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~ 332 (464)
+.|-|-+||.. +....++....++.++..+-..+.+- ++ +|+.+.+ |+...
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR--------~p~~~~~-------------~~~~a 53 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA------HK--------TAEHVVS-------------MLKEY 53 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TT--------CHHHHHH-------------HHHHH
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc------cC--------CHHHHHH-------------HHHHh
Confidence 45667778776 56667888888888888766555443 21 4433221 11111
Q ss_pred HHhcccCceeeccccch----hhHHHHHHcCCceeeccccc---ccchhHHHHHhhh--cceEEeccccccCCCCCCCCc
Q 048562 333 LILEHTAVGGFMTHCGW----NSTLESVSAGVPMVTWPITA---EQFSNEKLISDVL--KIGVKVGSVNWVSWSTEPSAA 403 (464)
Q Consensus 333 ~lL~~~~~~~~ItHGG~----~s~~Eal~~GvP~v~~P~~~---DQ~~na~~v~~~~--G~G~~l~~~~~~~~~~~~~~~ 403 (464)
. ..-..++||.=+|. .++.-++ .-+|+|.+|... +-.+ ..-++ +. |+.+.-- . +.
T Consensus 54 ~--~~~~~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~v-qmp~GvpVatv-~----------~~ 117 (159)
T 3rg8_A 54 E--ALDRPKLYITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSL-RMPSGISPALV-L----------EP 117 (159)
T ss_dssp H--TSCSCEEEEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHH-CCCTTCCCEEC-C----------SH
T ss_pred h--hcCCCcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHH-hCCCCCceEEe-c----------Cc
Confidence 1 11123447776664 3555544 568999999643 2233 33332 32 4332211 1 24
Q ss_pred cChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 048562 404 VGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKN 439 (464)
Q Consensus 404 ~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~ 439 (464)
.++.-++..|-.+ .|+ .++++.+.++++.++
T Consensus 118 ~nAa~lA~~Il~~-~d~----~l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 118 KNAALLAARIFSL-YDK----EIADSVKSYMESNAQ 148 (159)
T ss_dssp HHHHHHHHHHHTT-TCH----HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhC-CCH----HHHHHHHHHHHHHHH
Confidence 5666666555543 445 788888888887764
No 163
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=43.11 E-value=16 Score=34.58 Aligned_cols=35 Identities=14% Similarity=0.079 Sum_probs=26.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+++||+++..|..| ..+|..|.++||+|+++...
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 456899999776555 34788899999999988653
No 164
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=43.07 E-value=34 Score=32.24 Aligned_cols=72 Identities=10% Similarity=-0.042 Sum_probs=48.4
Q ss_pred CHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeecc
Q 048562 266 SPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMT 345 (464)
Q Consensus 266 ~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~It 345 (464)
..+....+.++|.+...+.||...+. .. -.++.++++...+-.+|+. ||-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG----------~g------------------~~rlL~~LD~~~i~~~PK~--~~G 112 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGG----------FN------------------SNQLLPYLDYDLISENPKI--LCG 112 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCC----------SC------------------GGGGGGGCCHHHHHHSCCE--EEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCc----------hh------------------HHHHhhhcchhhhccCCeE--EEe
Confidence 45678889999999999999998776 11 1234566666666666665 777
Q ss_pred ccchhhHHHHHH--cCCceeeccc
Q 048562 346 HCGWNSTLESVS--AGVPMVTWPI 367 (464)
Q Consensus 346 HGG~~s~~Eal~--~GvP~v~~P~ 367 (464)
.....++.-+++ .|+..+.-|.
T Consensus 113 ySDiT~L~~al~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 113 FSDITALATAIYTQTELITYSGAH 136 (327)
T ss_dssp CTTHHHHHHHHHHHHCBCEEECCC
T ss_pred cccccHHHHHHHHhcCeEEEeCcc
Confidence 777777766664 3555554443
No 165
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=42.81 E-value=96 Score=31.65 Aligned_cols=48 Identities=10% Similarity=0.037 Sum_probs=40.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhh
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKS 53 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 53 (464)
++.+|++.+.++..|-....-++..|..+|++|.+++..--.+.+...
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~a 144 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRT 144 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 367899999999999999999999999999999999876555554443
No 166
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=42.78 E-value=15 Score=34.27 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=28.0
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 3 SKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 3 ~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
....++||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 5 ~~~~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp CCCCSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred cccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 33457899999776555 36899999999999987543
No 167
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=42.26 E-value=94 Score=30.62 Aligned_cols=35 Identities=14% Similarity=0.289 Sum_probs=28.5
Q ss_pred HHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEE
Q 048562 95 EPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVF 132 (464)
Q Consensus 95 ~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~ 132 (464)
..+.+++++.+||++|.+.. ...+|+++|+|++.+
T Consensus 375 ~~l~~~i~~~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 375 FDVHQWIKNEGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHHSCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHHhcCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 34677888889999998854 466788999999986
No 168
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=42.09 E-value=34 Score=32.40 Aligned_cols=72 Identities=13% Similarity=0.025 Sum_probs=53.1
Q ss_pred CHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeecc
Q 048562 266 SPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFMT 345 (464)
Q Consensus 266 ~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~It 345 (464)
..+....+.+++.+...+.||.+.+. .. -.++.++++...+-++|+. ||-
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG----------~g------------------~~rlL~~lD~~~i~~~PK~--~~G 113 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGG----------MN------------------SNSLLPYIDYDAFQNNPKI--MIG 113 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCC----------SC------------------GGGGGGGSCHHHHHHSCCE--EEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccc----------cc------------------HHHHhhhcChhHHhhCCeE--EEE
Confidence 46678889999999999999998776 11 1234566666666667766 888
Q ss_pred ccchhhHHHHHH--cCCceeeccc
Q 048562 346 HCGWNSTLESVS--AGVPMVTWPI 367 (464)
Q Consensus 346 HGG~~s~~Eal~--~GvP~v~~P~ 367 (464)
+.....+.-+++ .|+..+--|.
T Consensus 114 ySDiTaL~~al~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 114 YSDATALLLGIYAKTGIPTFYGPA 137 (336)
T ss_dssp CGGGHHHHHHHHHHHCCCEEECCC
T ss_pred echHHHHHHHHHHhcCceEEECCh
Confidence 888888888876 4787777775
No 169
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=41.91 E-value=1.3e+02 Score=28.19 Aligned_cols=99 Identities=14% Similarity=0.122 Sum_probs=58.2
Q ss_pred cEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCc
Q 048562 8 VEMFFFPYVGGG--H--QIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMS 83 (464)
Q Consensus 8 ~~vl~~~~~~~G--H--~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (464)
.-|++.|..+.. . ..-+..+++.|.++|++|.+.+++...+..+...... .-....+. . .
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~-----~~~~~~l~--------g---~ 249 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQM-----ETKPIVAT--------G---K 249 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTC-----SSCCEECT--------T---C
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhc-----ccccEEee--------C---C
Confidence 456666665433 1 3468999999999999999877765554444331111 00111110 0 0
Q ss_pred ccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEEec
Q 048562 84 ATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVFNG 134 (464)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~ 134 (464)
....++..+++ +-|++|+-. +....+|..+|+|+|.+..
T Consensus 250 --------~sl~e~~ali~--~a~~~i~~D--sG~~HlAaa~g~P~v~lfg 288 (349)
T 3tov_A 250 --------FQLGPLAAAMN--RCNLLITND--SGPMHVGISQGVPIVALYG 288 (349)
T ss_dssp --------CCHHHHHHHHH--TCSEEEEES--SHHHHHHHTTTCCEEEECS
T ss_pred --------CCHHHHHHHHH--hCCEEEECC--CCHHHHHHhcCCCEEEEEC
Confidence 11334555664 458888852 3356678889999999854
No 170
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=41.78 E-value=27 Score=31.89 Aligned_cols=43 Identities=16% Similarity=0.136 Sum_probs=34.5
Q ss_pred CCCcEEEEEcCC---CccCHHHHHHHHHHHHhCCCcEEEEeCCcch
Q 048562 5 SSPVEMFFFPYV---GGGHQIPMVDIARIFAAHGAKSTIITSPKHA 47 (464)
Q Consensus 5 ~~~~~vl~~~~~---~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~ 47 (464)
|..+|.+|++.+ +.|-=.-.-.|+..|..||++|+..=-+++.
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYl 65 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYI 65 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSS
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccce
Confidence 457789998866 6677778899999999999999998655554
No 171
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=41.67 E-value=46 Score=31.05 Aligned_cols=74 Identities=8% Similarity=0.080 Sum_probs=56.4
Q ss_pred CCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhc-ccCceee
Q 048562 265 LSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILE-HTAVGGF 343 (464)
Q Consensus 265 ~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~-~~~~~~~ 343 (464)
...+....+.+++.+...+.||...+. .. -.++.++++...+-. +|+. |
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGG----------yg------------------a~rlLp~LD~~~i~~a~PK~--~ 113 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGG----------YG------------------CGQLLPGLDWGRLQAASPRP--L 113 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCS----------SC------------------GGGGTTTCCHHHHHHSCCCC--E
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCC----------cC------------------HHHHhhccchhhhhccCCCE--E
Confidence 356778889999999999999999776 11 123556777666666 7877 9
Q ss_pred ccccchhhHHHHHH-cCCceeecccc
Q 048562 344 MTHCGWNSTLESVS-AGVPMVTWPIT 368 (464)
Q Consensus 344 ItHGG~~s~~Eal~-~GvP~v~~P~~ 368 (464)
|-+.....+.-+++ .|++.+--|..
T Consensus 114 iGySDiTaL~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 114 IGFSDISVLLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp EECGGGHHHHHHHHHTTCCEEECCCG
T ss_pred EEEchhHHHHHHHHHcCCcEEECHhh
Confidence 99999999999887 48888877753
No 172
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=41.59 E-value=1.7e+02 Score=26.84 Aligned_cols=105 Identities=9% Similarity=0.066 Sum_probs=62.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCc-c-hhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPK-H-ALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDT 80 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (464)
.+++||+++..+. || .+..|..+-.+- ..+|..+.++. . ....++ .++.+..+|..
T Consensus 88 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~---------~gIp~~~~~~~-------- 147 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHW---------HKIPYYHFALD-------- 147 (286)
T ss_dssp TCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHH---------TTCCEEECCCB--------
T ss_pred CCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHH---------cCCCEEEeCCC--------
Confidence 4578998888765 43 445555554332 47887776543 2 222222 25666655410
Q ss_pred CCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 81 DMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
. . .......++.+.|++.++|+||.=.+.- ....+...+.-.++-++++
T Consensus 148 -~-~----~r~~~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 148 -P-K----DKPGQERKVLQVIEETGAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp -T-T----BHHHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred -c-C----CHHHHHHHHHHHHHhcCCCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 0 0 1112356778889999999999987653 4555666666677877443
No 173
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=41.52 E-value=87 Score=28.94 Aligned_cols=22 Identities=18% Similarity=0.336 Sum_probs=18.3
Q ss_pred HhhhHHHHHHhhhhCCCCEEEe
Q 048562 90 TSMLQEPLKSLLVDSRPDCIVH 111 (464)
Q Consensus 90 ~~~~~~~l~~~l~~~~pD~Vi~ 111 (464)
.......+.++|++.+||+|+.
T Consensus 114 ~~~~~~~l~~~ir~~rP~vV~t 135 (303)
T 1q74_A 114 PRQTVGALVAIIRELRPHVVVT 135 (303)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEE
Confidence 3456788889999999999997
No 174
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=41.51 E-value=90 Score=25.37 Aligned_cols=90 Identities=13% Similarity=0.013 Sum_probs=53.0
Q ss_pred cEEEEEcCCCcc---CHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcc
Q 048562 8 VEMFFFPYVGGG---HQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSA 84 (464)
Q Consensus 8 ~~vl~~~~~~~G---H~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (464)
..++++..|+.+ ...-+..+.++|.+.++++.+++.....+.+ +.++.+..+ ..
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~----------~~~v~~~~~-------------~~ 77 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTL----------GLNTRLYKW-------------IP 77 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTC----------CTTEEEESS-------------CC
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcccC----------CCcEEEecC-------------CC
Confidence 356777777776 4556677888888778888888765432110 123443322 00
Q ss_pred cHHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEEe
Q 048562 85 TPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVFN 133 (464)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~ 133 (464)
. .+++.-..-|++|+-.... ...=|-.+|+|.|.+-
T Consensus 78 ---------~---~~~l~~~~ad~~I~~~G~~-t~~Ea~~~G~P~i~~p 113 (170)
T 2o6l_A 78 ---------Q---NDLLGHPKTRAFITHGGAN-GIYEAIYHGIPMVGIP 113 (170)
T ss_dssp ---------H---HHHHTSTTEEEEEECCCHH-HHHHHHHHTCCEEECC
T ss_pred ---------H---HHHhcCCCcCEEEEcCCcc-HHHHHHHcCCCEEecc
Confidence 0 1223225679999864433 3444556799999973
No 175
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=41.46 E-value=54 Score=31.26 Aligned_cols=38 Identities=11% Similarity=0.084 Sum_probs=31.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcch
Q 048562 10 MFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHA 47 (464)
Q Consensus 10 vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~ 47 (464)
++++..++.|=..-++.++..+...|..|.|+......
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~ 101 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHAL 101 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 45566678899999999999999999999999876543
No 176
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=40.36 E-value=42 Score=25.37 Aligned_cols=39 Identities=18% Similarity=0.347 Sum_probs=25.8
Q ss_pred HHhhhhCCCCEEEeCCCch--hhHHHHH----HcCCCeEEEeccc
Q 048562 98 KSLLVDSRPDCIVHDMFHH--WSADVIN----SMNIPRIVFNGNC 136 (464)
Q Consensus 98 ~~~l~~~~pD~Vi~D~~~~--~~~~~A~----~~giP~v~~~~~~ 136 (464)
.+.+++.+||+||.|...+ .+..+++ ..++|.|.++...
T Consensus 39 l~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 39 VEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 3556678899999997654 3444443 3468888776543
No 177
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=40.21 E-value=23 Score=32.39 Aligned_cols=28 Identities=7% Similarity=0.022 Sum_probs=23.6
Q ss_pred ceeeccccchhhHHHHHHc------CCceeeccc
Q 048562 340 VGGFMTHCGWNSTLESVSA------GVPMVTWPI 367 (464)
Q Consensus 340 ~~~~ItHGG~~s~~Eal~~------GvP~v~~P~ 367 (464)
+.++|.=||=||+.++... ++|++++|.
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 3459999999999999765 899999974
No 178
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=40.11 E-value=41 Score=26.21 Aligned_cols=38 Identities=11% Similarity=0.288 Sum_probs=25.1
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHHc-------CCCeEEEeccc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINSM-------NIPRIVFNGNC 136 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~~-------giP~v~~~~~~ 136 (464)
+.+.+.+||+||.|...+ .+..+++.+ ++|.|.++...
T Consensus 42 ~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 42 QQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 455668899999997654 344444432 57888876543
No 179
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=40.06 E-value=62 Score=31.63 Aligned_cols=97 Identities=13% Similarity=0.034 Sum_probs=53.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhh-hhhhhhccCCCCCeEEEEecCCCCCCCCCCCCccc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSF-QKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSAT 85 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (464)
|.|||++.. | ...+.+++++.+.|++|+++.+....... ... .. ..+.++ | ......+.
T Consensus 1 ~k~ilI~g~---g--~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~--------ad-~~~~i~-~----~~~~~~~~- 60 (451)
T 2vpq_A 1 MKKVLIANR---G--EIAVRIIRACRDLGIQTVAIYSEGDKDALHTQI--------AD-EAYCVG-P----TLSKDSYL- 60 (451)
T ss_dssp -CEEEECCC---H--HHHHHHHHHHHHTTCEEEEEEEGGGTTCHHHHH--------SS-EEEEEE-C----SSGGGTTT-
T ss_pred CceEEEeCC---C--HHHHHHHHHHHHcCCEEEEEecccccccchhhh--------CC-EEEEcC-C----CCcccccc-
Confidence 357777652 3 35678999999999999988754332111 111 01 222222 1 00000000
Q ss_pred HHHHHhhhHHHHHHhhhhCCCCEEEeCCCc----hhhHHHHHHcCCCeE
Q 048562 86 PRTDTSMLQEPLKSLLVDSRPDCIVHDMFH----HWSADVINSMNIPRI 130 (464)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~----~~~~~~A~~~giP~v 130 (464)
-.+.+.+++++.++|+|+...-+ .....+++.+|+|++
T Consensus 61 -------d~~~l~~~~~~~~~d~v~~~~g~~~e~~~~~~~~~~~gi~~~ 102 (451)
T 2vpq_A 61 -------NIPNILSIATSTGCDGVHPGYGFLAENADFAELCEACQLKFI 102 (451)
T ss_dssp -------CHHHHHHHHHHTTCSEEECCSSTTTTCHHHHHHHHTTTCEES
T ss_pred -------CHHHHHHHHHHcCCCEEEECCCccccCHHHHHHHHHcCCeEE
Confidence 02556677778899999976321 123456667888864
No 180
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=39.95 E-value=20 Score=31.54 Aligned_cols=37 Identities=14% Similarity=0.120 Sum_probs=32.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|||.|..-||-|=..-...||..|+++|++|.++-..
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4688877778899999999999999999999998544
No 181
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=39.90 E-value=1.6e+02 Score=25.17 Aligned_cols=37 Identities=14% Similarity=0.070 Sum_probs=25.7
Q ss_pred HHHHhcccCceeeccccchhhHHHH---HHcCCceeeccc
Q 048562 331 QLLILEHTAVGGFMTHCGWNSTLES---VSAGVPMVTWPI 367 (464)
Q Consensus 331 q~~lL~~~~~~~~ItHGG~~s~~Ea---l~~GvP~v~~P~ 367 (464)
...++..-+...++--||.||+.|+ +.+|+|+++++.
T Consensus 111 Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 111 RSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 4444433333467778999987664 779999999973
No 182
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=39.58 E-value=1.1e+02 Score=29.20 Aligned_cols=63 Identities=10% Similarity=0.149 Sum_probs=46.7
Q ss_pred cccHHHHhcccCceeecc----ccchh--hHHHHHHcCCceee-cccccccchhHHHHHhhhcceEEecc
Q 048562 328 WAPQLLILEHTAVGGFMT----HCGWN--STLESVSAGVPMVT-WPITAEQFSNEKLISDVLKIGVKVGS 390 (464)
Q Consensus 328 ~vpq~~lL~~~~~~~~It----HGG~~--s~~Eal~~GvP~v~-~P~~~DQ~~na~~v~~~~G~G~~l~~ 390 (464)
|-...+++...++.++.+ |++.+ -..++|.+|+++++ -|+..|+-.-..+++++.|+=..+..
T Consensus 57 ~~~~~~l~~~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~~~v~~ 126 (372)
T 4gmf_A 57 YTSPEQITGMPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCCYWINT 126 (372)
T ss_dssp ESSGGGCCSCCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred ECCHHHHhcCCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCEEEEcC
Confidence 445667787777765553 66643 47889999999999 88877777777776678888777754
No 183
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=39.46 E-value=1.5e+02 Score=26.60 Aligned_cols=35 Identities=23% Similarity=0.184 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
+.|+++++.++.| --..+|+.|+++|++|.++...
T Consensus 23 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 23 RPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp --CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3456667665543 3467899999999999877654
No 184
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=39.46 E-value=29 Score=30.79 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=30.4
Q ss_pred CcEEEEEc--CCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 7 PVEMFFFP--YVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 7 ~~~vl~~~--~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
|+|++.+. -++-|-..-...||..|+++|++|.++-...
T Consensus 1 M~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 1 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp -CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 34555554 4488889999999999999999999986554
No 185
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=39.24 E-value=31 Score=27.26 Aligned_cols=38 Identities=13% Similarity=0.336 Sum_probs=25.1
Q ss_pred HHhhhhCCCCEEEeCCCch--hhHHHHHHc---------CCCeEEEecc
Q 048562 98 KSLLVDSRPDCIVHDMFHH--WSADVINSM---------NIPRIVFNGN 135 (464)
Q Consensus 98 ~~~l~~~~pD~Vi~D~~~~--~~~~~A~~~---------giP~v~~~~~ 135 (464)
.+.+++.+||+||.|...+ .+..+++.+ .+|.|.++..
T Consensus 51 l~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 51 LDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 3455678899999997654 355554433 3788877654
No 186
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=39.04 E-value=37 Score=31.64 Aligned_cols=40 Identities=8% Similarity=0.125 Sum_probs=30.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhh
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKS 53 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 53 (464)
+||+++-.|+.|- .+|..|.+.||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 6899998777663 57889999999999998765 3555544
No 187
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=38.91 E-value=1.9e+02 Score=25.16 Aligned_cols=35 Identities=14% Similarity=0.018 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
+.|.++++.++.| --..+|+.|+++|++|.+....
T Consensus 3 ~~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 3 MTKSALVTGASRG---IGRSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp CSCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3456666655432 3467899999999999887653
No 188
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=38.80 E-value=33 Score=29.98 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=29.9
Q ss_pred cEEEEEc--CCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 8 VEMFFFP--YVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 8 ~~vl~~~--~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
+|++.+. -++-|-..-...||..|+++|++|.++-...
T Consensus 2 ~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 3444443 4588889999999999999999999986653
No 189
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=38.79 E-value=1.8e+02 Score=26.67 Aligned_cols=101 Identities=15% Similarity=0.135 Sum_probs=55.9
Q ss_pred cEEEEEcCCCcc---C--HHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCC--CeEEEEecCCCCCCCCCC
Q 048562 8 VEMFFFPYVGGG---H--QIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGL--PITIKTLHLPDDIEIPDT 80 (464)
Q Consensus 8 ~~vl~~~~~~~G---H--~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~ 80 (464)
..|++.|....+ . ..-+..+++.|.++|++|.+++++...+......... +. ......+. .
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~---~~~~~~~~~~l~--------g- 248 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAAL---NTEQQAWCRNLA--------G- 248 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTS---CHHHHTTEEECT--------T-
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhh---hhccccceEecc--------C-
Confidence 346666654222 2 3368899999999999998877665443332221100 00 00111211 0
Q ss_pred CCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEEec
Q 048562 81 DMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVFNG 134 (464)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~ 134 (464)
. .-..++..+++ +-|++|+-. +..+.+|..+|+|+|.+..
T Consensus 249 --~--------~sl~e~~ali~--~a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 249 --E--------TQLDQAVILIA--ACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp --T--------SCHHHHHHHHH--TSSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred --c--------CCHHHHHHHHH--hCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 0 01234445554 458888753 3456678889999999853
No 190
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=38.54 E-value=26 Score=32.67 Aligned_cols=43 Identities=14% Similarity=0.254 Sum_probs=30.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhh
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKS 53 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 53 (464)
.++||+++..|+.| ..+|..|++.||+|+++..+...+.+.+.
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~~ 60 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEAT 60 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHHH
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHhC
Confidence 57899999887776 46789999999999999433334444443
No 191
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=38.32 E-value=20 Score=33.64 Aligned_cols=38 Identities=16% Similarity=0.154 Sum_probs=26.7
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+ .+++.||.|+-.|..| ..+|..|+++||+|+++...
T Consensus 1 m~-~~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 1 MA-SPAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -------CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CC-CCCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 54 3677899999877665 47899999999999998654
No 192
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=37.63 E-value=24 Score=29.20 Aligned_cols=37 Identities=14% Similarity=0.150 Sum_probs=29.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKH 46 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 46 (464)
..++++++.+.. +.|++.+++.|.++|.+|+++ ....
T Consensus 23 ~~~~llIaGG~G--ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGAYTG--IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEETTH--HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCeEEEEEccCc--HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 457888877543 899999999999999999999 5443
No 193
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=37.62 E-value=18 Score=31.80 Aligned_cols=34 Identities=21% Similarity=0.100 Sum_probs=26.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
|+|+||.|+-.|..| ..+|+.|.+.||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 567899999765544 4688999999999998444
No 194
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=37.51 E-value=15 Score=35.06 Aligned_cols=35 Identities=9% Similarity=-0.000 Sum_probs=27.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+|+||.|+-.|..| ..+|..|+++||+|+++...
T Consensus 13 m~M~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 13 LYLNKAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp CCEEEEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred hccCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 334489999887666 46789999999999988654
No 195
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=37.51 E-value=1.7e+02 Score=26.22 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
-|+++++.++.| --..+|+.|+++|++|.++.-.
T Consensus 9 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 9 GKTMFISGGSRG---IGLAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 345666655443 3457899999999999887654
No 196
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=37.47 E-value=1.8e+02 Score=24.30 Aligned_cols=143 Identities=13% Similarity=0.121 Sum_probs=79.9
Q ss_pred CcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccH
Q 048562 252 NSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQ 331 (464)
Q Consensus 252 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq 331 (464)
+|.|-|-+||.. +.+..++....|+.++..+-..+..- ++ +|+.+.+ |..+
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR--------~p~~l~~-------------~~~~ 61 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HR--------TPDYMFE-------------YAET 61 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TT--------SHHHHHH-------------HHHH
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cC--------CHHHHHH-------------HHHH
Confidence 567888888887 56677888888888888766555443 21 4433221 1110
Q ss_pred HHHhcccCceeeccccch----hhHHHHHHcCCceeecccccc--cc-hhHHHHHhh--hcceEE---eccccccCCCCC
Q 048562 332 LLILEHTAVGGFMTHCGW----NSTLESVSAGVPMVTWPITAE--QF-SNEKLISDV--LKIGVK---VGSVNWVSWSTE 399 (464)
Q Consensus 332 ~~lL~~~~~~~~ItHGG~----~s~~Eal~~GvP~v~~P~~~D--Q~-~na~~v~~~--~G~G~~---l~~~~~~~~~~~ 399 (464)
...-.+++||.=+|. .++.-++ .-+|+|.+|.... .- +-..-++ + .|+.+. ++..
T Consensus 62 ---a~~~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSiv-qmP~GvpVatV~I~~a-------- 128 (170)
T 1xmp_A 62 ---ARERGLKVIIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVAIGKA-------- 128 (170)
T ss_dssp ---TTTTTCCEEEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHH-CCCTTCCCEECCSSHH--------
T ss_pred ---HHhCCCcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecCCc--------
Confidence 001112336666553 3444443 3689999998542 12 2222343 4 455421 1100
Q ss_pred CCCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhc
Q 048562 400 PSAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEE 443 (464)
Q Consensus 400 ~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~ 443 (464)
+..++.-++..|-. +.|+ .++++.+.++++.++.+.+
T Consensus 129 --~~~nAallAaqIla-~~d~----~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 129 --GSTNAGLLAAQILG-SFHD----DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp --HHHHHHHHHHHHHH-TTCH----HHHHHHHHHHHHHHHHHHC
T ss_pred --chHHHHHHHHHHHc-cCCH----HHHHHHHHHHHHHHHHHHh
Confidence 13556666655553 4555 7999999999988865544
No 197
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=37.14 E-value=2e+02 Score=24.68 Aligned_cols=42 Identities=12% Similarity=0.062 Sum_probs=34.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhh
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSF 50 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 50 (464)
-+++...++.|-..-++.++..++..|..|.|++.....+.+
T Consensus 25 ~~~i~G~~GsGKTtl~~~~~~~~~~~~~~v~~~~~e~~~~~~ 66 (247)
T 2dr3_A 25 VVLLSGGPGTGKTIFSQQFLWNGLKMGEPGIYVALEEHPVQV 66 (247)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEESSSCHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEEccCCHHHH
Confidence 456667779999888899999999999999999887654443
No 198
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=37.05 E-value=37 Score=30.92 Aligned_cols=42 Identities=14% Similarity=0.218 Sum_probs=33.0
Q ss_pred hHHHHHHhhhhCCCCEEEeCCCch------hhHHHHHHcCCCeEEEec
Q 048562 93 LQEPLKSLLVDSRPDCIVHDMFHH------WSADVINSMNIPRIVFNG 134 (464)
Q Consensus 93 ~~~~l~~~l~~~~pD~Vi~D~~~~------~~~~~A~~~giP~v~~~~ 134 (464)
....+.+++++.+||+|++-.... .+..+|.++|+|+++...
T Consensus 100 ~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 100 VGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 355666677777899999987652 688899999999998743
No 199
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=36.93 E-value=95 Score=24.92 Aligned_cols=98 Identities=8% Similarity=0.001 Sum_probs=63.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcchhhhhh-hhhhccCCCCCeEEEEecCCCCCCCCCCCC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKHALSFQK-SINRNQQSGLPITIKTLHLPDDIEIPDTDM 82 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (464)
.|++|.+... ..+=.-++.+|+.|.+. ||++. +| ......+.. . ++....+. ..
T Consensus 2 ~~~~ialsv~--D~dK~~~v~~a~~~~~ll~Gf~l~-AT-~gTa~~L~e~~---------Gl~v~~v~----------k~ 58 (134)
T 2xw6_A 2 HMRALALIAH--DAKKEEMVAFCQRHREVLARFPLV-AT-GTTGRRIEEAT---------GLTVEKLL----------SG 58 (134)
T ss_dssp CSCEEEEEEC--GGGHHHHHHHHHHTHHHHTTSCEE-EC-HHHHHHHHHHH---------CCCCEECS----------CG
T ss_pred CccEEEEEEe--cccHHHHHHHHHHHHHHhCCCEEE-Ec-cHHHHHHHHhh---------CceEEEEE----------ec
Confidence 4677777765 34446789999999999 99743 44 434455555 4 33333321 00
Q ss_pred cccHHHHHhhhHHHHHHhhhhCCCCEEEeCCC--c--------hhhHHHHHHcCCCeEEEe
Q 048562 83 SATPRTDTSMLQEPLKSLLVDSRPDCIVHDMF--H--------HWSADVINSMNIPRIVFN 133 (464)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~--~--------~~~~~~A~~~giP~v~~~ 133 (464)
. . .-.+.+.+++++.+.|+||.-.- . .....+|-..+||+++..
T Consensus 59 ~------~-eG~p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l 112 (134)
T 2xw6_A 59 P------L-GGDQQMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNP 112 (134)
T ss_dssp G------G-THHHHHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECSH
T ss_pred C------C-CCcchHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcCH
Confidence 0 0 12567889999999999998543 1 136678888999999853
No 200
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=36.83 E-value=26 Score=32.54 Aligned_cols=32 Identities=13% Similarity=0.057 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
|.||.|+-.+..|. ++|+.|.++||+|+++--
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 67899999998874 689999999999998843
No 201
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=36.81 E-value=29 Score=27.24 Aligned_cols=33 Identities=12% Similarity=0.163 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
.+||+++.. |.+- ..+++.|.++||+|+++...
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 468888843 5553 35789999999999988764
No 202
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=36.32 E-value=52 Score=32.86 Aligned_cols=41 Identities=10% Similarity=-0.039 Sum_probs=34.3
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEeCCcchhhh
Q 048562 10 MFFFPYVGGGHQIPMVDIARIFAAH-GAKSTIITSPKHALSF 50 (464)
Q Consensus 10 vl~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~~~~~ 50 (464)
+++...|+.|-..-++.+|..++.+ |..|.|++.+...+.+
T Consensus 245 ~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l 286 (503)
T 1q57_A 245 IMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEET 286 (503)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHH
T ss_pred EEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHH
Confidence 5666777999999999999999987 9999999987665443
No 203
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=35.99 E-value=1.5e+02 Score=26.24 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=23.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+++++.++.| --..+|+.|+++|++|.+....
T Consensus 12 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 12 KVVVISGVGPA---LGTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp CEEEEESCCTT---HHHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeCC
Confidence 45566654433 3467899999999999887654
No 204
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=35.85 E-value=68 Score=28.32 Aligned_cols=29 Identities=14% Similarity=0.166 Sum_probs=24.3
Q ss_pred ceeeccccchhhHHHHHHcCCceeeccccc
Q 048562 340 VGGFMTHCGWNSTLESVSAGVPMVTWPITA 369 (464)
Q Consensus 340 ~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~ 369 (464)
++++|+.||...+...- .++|+|-++..+
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 44599999999999975 689999999754
No 205
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=35.83 E-value=68 Score=24.47 Aligned_cols=39 Identities=8% Similarity=0.069 Sum_probs=28.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
|+|+||++++..|.|==.-.-.+=+.+.++|.++.+...
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 457899999977555445555788888899998876543
No 206
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=35.82 E-value=22 Score=32.82 Aligned_cols=34 Identities=18% Similarity=0.090 Sum_probs=27.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
+|.||.|+-.|..|+ .||..|+++||+|+++...
T Consensus 14 ~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 467899998876665 5889999999999988654
No 207
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=35.77 E-value=23 Score=31.51 Aligned_cols=30 Identities=13% Similarity=0.141 Sum_probs=23.3
Q ss_pred CCCcEEEEEcCC-Ccc-CHHHHHHHHHHHHhC
Q 048562 5 SSPVEMFFFPYV-GGG-HQIPMVDIARIFAAH 34 (464)
Q Consensus 5 ~~~~~vl~~~~~-~~G-H~~p~l~la~~L~~r 34 (464)
++|+|||+..++ ..| -+||...++++|...
T Consensus 21 ~~mk~VLvTGF~PF~g~~~NPS~~~v~~L~~~ 52 (228)
T 4hps_A 21 QSMKTILVTAFDPFGGEAINPSWEAIKPLQGS 52 (228)
T ss_dssp CCCEEEEEEEECCCTTCSCCHHHHHHGGGTTC
T ss_pred CCCCEEEEEeccCCCCCCCChHHHHHHHhcCc
Confidence 348899988876 333 579999999999875
No 208
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=35.77 E-value=35 Score=30.58 Aligned_cols=37 Identities=11% Similarity=0.136 Sum_probs=31.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
|+.|.|..-||-|-..-...||..|+++|++|.++=.
T Consensus 1 M~vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~ 37 (269)
T 1cp2_A 1 MRQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGC 37 (269)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcC
Confidence 3456676677899999999999999999999999743
No 209
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=35.34 E-value=1e+02 Score=28.59 Aligned_cols=32 Identities=13% Similarity=0.062 Sum_probs=22.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
|+++++..+.| --..+|+.|+++|++|....-
T Consensus 6 k~vlVTGas~G---IG~aia~~L~~~G~~V~~~~r 37 (324)
T 3u9l_A 6 KIILITGASSG---FGRLTAEALAGAGHRVYASMR 37 (324)
T ss_dssp CEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEecC
Confidence 46666665443 346889999999999987543
No 210
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=35.10 E-value=1.4e+02 Score=26.88 Aligned_cols=33 Identities=21% Similarity=0.139 Sum_probs=23.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
.|+++++.++.| --..+|+.|+++|++|.+...
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356666665443 346889999999999987765
No 211
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=35.01 E-value=2.1e+02 Score=24.88 Aligned_cols=34 Identities=21% Similarity=0.102 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
-|+++++.++.| --..+|+.|+++|++|.+....
T Consensus 7 ~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 7 GKVALVTGASRG---IGRAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeCC
Confidence 356667665544 3568899999999999886543
No 212
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=34.97 E-value=41 Score=30.38 Aligned_cols=42 Identities=12% Similarity=0.090 Sum_probs=32.7
Q ss_pred hHHHHHHhhhhCCCCEEEeCCCch------hhHHHHHHcCCCeEEEec
Q 048562 93 LQEPLKSLLVDSRPDCIVHDMFHH------WSADVINSMNIPRIVFNG 134 (464)
Q Consensus 93 ~~~~l~~~l~~~~pD~Vi~D~~~~------~~~~~A~~~giP~v~~~~ 134 (464)
....+.+++++.+||+|++-.... .+..+|.++|+|+++...
T Consensus 104 ~A~~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 104 VARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 355666667767899999987552 588899999999998743
No 213
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=34.94 E-value=67 Score=30.70 Aligned_cols=88 Identities=14% Similarity=0.081 Sum_probs=54.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcccHHH
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSATPRT 88 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (464)
-+++...++.|-..-++.++..++.+|..|.|+..+...+..... +. |.+..-..+. . . . .
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~~~~~a~--~~---g~d~~~l~i~------~-~-~---~--- 136 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYAR--AL---GVNTDELLVS------Q-P-D---N--- 136 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHH--HT---TCCGGGCEEE------C-C-S---S---
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCChhHHHHH--Hc---CCCHHHceee------c-C-C---c---
Confidence 456677779999999999999999999999999987544332111 00 1111000000 0 0 0 1
Q ss_pred HHhhhHHHHHHhhhhCCCCEEEeCCCch
Q 048562 89 DTSMLQEPLKSLLVDSRPDCIVHDMFHH 116 (464)
Q Consensus 89 ~~~~~~~~l~~~l~~~~pD~Vi~D~~~~ 116 (464)
.+.....+..++++.++|+||.|....
T Consensus 137 -~e~~l~~l~~l~~~~~~~lVVIDsl~~ 163 (366)
T 1xp8_A 137 -GEQALEIMELLVRSGAIDVVVVDSVAA 163 (366)
T ss_dssp -HHHHHHHHHHHHTTTCCSEEEEECTTT
T ss_pred -HHHHHHHHHHHHhcCCCCEEEEeChHH
Confidence 122334455666678899999997764
No 214
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=34.87 E-value=34 Score=29.07 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCccCHHHHHH-HHHHHHhCCCcEEEEeC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVD-IARIFAAHGAKSTIITS 43 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~-la~~L~~rGh~Vt~~~~ 43 (464)
+|+||+++-.. .|+..-+.. +++.|.+.|++|.++--
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 36789888877 887665544 45666667999887754
No 215
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=34.76 E-value=26 Score=33.43 Aligned_cols=35 Identities=14% Similarity=0.116 Sum_probs=28.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
+.++||.|+-.|..|. .+|..|+++||+|+++...
T Consensus 27 ~~~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSC
T ss_pred ccCCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 3467899998877664 6899999999999998875
No 216
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=34.57 E-value=1e+02 Score=27.17 Aligned_cols=34 Identities=15% Similarity=0.087 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
|+++++.++ |- --..+++.|+++|++|.++....
T Consensus 3 k~vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r~~ 36 (258)
T 3a28_C 3 KVAMVTGGA-QG--IGRGISEKLAADGFDIAVADLPQ 36 (258)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHHTCEEEEEECGG
T ss_pred CEEEEeCCC-cH--HHHHHHHHHHHCCCEEEEEeCCc
Confidence 455555543 32 34678999999999998876543
No 217
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=34.49 E-value=1.7e+02 Score=26.09 Aligned_cols=33 Identities=18% Similarity=0.020 Sum_probs=24.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+++++.++.| --..+|+.|+++|++|.++...
T Consensus 11 k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGARG---MGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeCC
Confidence 56666665543 3467899999999999887654
No 218
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=34.41 E-value=35 Score=29.48 Aligned_cols=34 Identities=9% Similarity=0.069 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|++|++.. +.|.+ -..|++.|.++||+|+.++-.
T Consensus 4 m~~ilItG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLIG--ASGFV--GSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEET--CCHHH--HHHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEEc--CCchH--HHHHHHHHHHCCCEEEEEEcC
Confidence 67777663 44443 357899999999999988765
No 219
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=34.28 E-value=82 Score=30.68 Aligned_cols=97 Identities=12% Similarity=-0.023 Sum_probs=52.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhh-hhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCccc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALS-FQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSAT 85 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (464)
|.|||++.. | ...+.+++++.+.|++|+++.+...... .... .. .++.++ | ......+.
T Consensus 2 ~k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~--------ad-~~~~~~-p----~~~~~~~~- 61 (449)
T 2w70_A 2 LDKIVIANR---G--EIALRILRACKELGIKTVAVHSSADRDLKHVLL--------AD-ETVCIG-P----APSVKSYL- 61 (449)
T ss_dssp CSEEEECCC---H--HHHHHHHHHHHHHTCEEEEEEEGGGTTCHHHHH--------SS-EEEEEE-C----SSGGGTTT-
T ss_pred CceEEEeCC---c--HHHHHHHHHHHHcCCeEEEEeccccccCchhhh--------CC-EEEEcC-C----CCcccccc-
Confidence 457887753 3 3467899999999999998865322111 1111 01 222221 1 00000000
Q ss_pred HHHHHhhhHHHHHHhhhhCCCCEEEeCCCc----hhhHHHHHHcCCCeE
Q 048562 86 PRTDTSMLQEPLKSLLVDSRPDCIVHDMFH----HWSADVINSMNIPRI 130 (464)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~----~~~~~~A~~~giP~v 130 (464)
-.+.+.+++++.++|+|+...-+ .....+++.+|+|++
T Consensus 62 -------d~~~l~~~~~~~~~d~v~~~~g~~~e~~~~~~~~e~~gi~~~ 103 (449)
T 2w70_A 62 -------NIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFI 103 (449)
T ss_dssp -------CHHHHHHHHHHHTCCEEECCSSTTTTCHHHHHHHHHTTCEES
T ss_pred -------CHHHHHHHHHHcCCCEEEECCCCcccCHHHHHHHHHcCCceE
Confidence 13556667777889999975321 123456677898864
No 220
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=34.15 E-value=2.2e+02 Score=25.07 Aligned_cols=33 Identities=12% Similarity=-0.099 Sum_probs=23.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
-|+++++.++. - --..+|+.|+++|++|.+...
T Consensus 4 ~k~vlVTGas~-g--IG~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 4 NKCALVTGSSR-G--VGKAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp CCEEEESSCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCc-h--HHHHHHHHHHHCCCEEEEEcC
Confidence 35666665443 2 346789999999999998633
No 221
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=34.15 E-value=61 Score=27.82 Aligned_cols=32 Identities=9% Similarity=0.213 Sum_probs=25.8
Q ss_pred cCceeeccccchhhHHHHHHcCCceeecccccc
Q 048562 338 TAVGGFMTHCGWNSTLESVSAGVPMVTWPITAE 370 (464)
Q Consensus 338 ~~~~~~ItHGG~~s~~Eal~~GvP~v~~P~~~D 370 (464)
..++++|+.||...+.... .++|+|-++..+-
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~~ 81 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTRF 81 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCHH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCHh
Confidence 3444599999999999875 6899999998653
No 222
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=34.06 E-value=1.3e+02 Score=27.30 Aligned_cols=33 Identities=21% Similarity=0.102 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+++++.++.| --..+|+.|+++|++|.+....
T Consensus 50 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 50 RKALVTGGDSG---IGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEECCG
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56666665432 3468899999999999887654
No 223
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=34.02 E-value=97 Score=26.68 Aligned_cols=34 Identities=9% Similarity=0.007 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Q 048562 424 AEMRRRAGELGEKAKNAVEEGGSSFIDAEALLQELKSV 461 (464)
Q Consensus 424 ~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~~~~~ 461 (464)
+.|.++|+++.+++.. +.......++.|+.|..|
T Consensus 140 ~~f~~~a~~~~~~~a~----~~~~~~~~eekV~~l~~M 173 (201)
T 3k9o_A 140 EMFKQTARLWAHVYAG----APVSSPEYTKKIENLCAM 173 (201)
T ss_dssp HHHHHHHHHHHHHHHC----CCCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcc----cccccchhHHHHHHHHHc
Confidence 4789999999888773 233334567788887765
No 224
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=33.99 E-value=2.2e+02 Score=24.15 Aligned_cols=142 Identities=16% Similarity=0.160 Sum_probs=78.5
Q ss_pred CcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccH
Q 048562 252 NSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQ 331 (464)
Q Consensus 252 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq 331 (464)
-|+|-|-+||.. +....++....|+.++..+-..+.+- ++ +|+.+.+- +.+
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR--------~p~~l~~~-------------~~~ 63 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA------HR--------TPDRMFEY-------------AKN 63 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TT--------CHHHHHHH-------------HHH
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cC--------CHHHHHHH-------------HHH
Confidence 458888888887 56677888888888888766555443 21 44332211 110
Q ss_pred HHHhcccCceeeccccc----hhhHHHHHHcCCceeecccccc--cchhH-HHHHhhh--cceEEe-ccccccCCCCCCC
Q 048562 332 LLILEHTAVGGFMTHCG----WNSTLESVSAGVPMVTWPITAE--QFSNE-KLISDVL--KIGVKV-GSVNWVSWSTEPS 401 (464)
Q Consensus 332 ~~lL~~~~~~~~ItHGG----~~s~~Eal~~GvP~v~~P~~~D--Q~~na-~~v~~~~--G~G~~l-~~~~~~~~~~~~~ 401 (464)
...-.+++||.=+| +.++.-++ .-+|+|.+|.... .-..+ .-++ +. |+.+.. ...
T Consensus 64 ---a~~~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~Id---------- 128 (183)
T 1o4v_A 64 ---AEERGIEVIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIV-QMPGGVPVATVAIN---------- 128 (183)
T ss_dssp ---TTTTTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-TCCTTCCCEECCTT----------
T ss_pred ---HHhCCCcEEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecC----------
Confidence 00111233666555 34555554 5789999997442 22222 2343 44 533221 111
Q ss_pred CccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 048562 402 AAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVE 442 (464)
Q Consensus 402 ~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~ 442 (464)
+..++.-++..|-. +.|+ .++++.+.+++..++.+.
T Consensus 129 ~~~nAa~lAaqIla-~~d~----~l~~kL~~~r~~~~~~v~ 164 (183)
T 1o4v_A 129 NAKNAGILAASILG-IKYP----EIARKVKEYKERMKREVL 164 (183)
T ss_dssp CHHHHHHHHHHHHH-TTCH----HHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHh-cCCH----HHHHHHHHHHHHHHHHHH
Confidence 24566666666653 3455 788888888887775443
No 225
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=33.98 E-value=43 Score=31.21 Aligned_cols=34 Identities=15% Similarity=0.171 Sum_probs=27.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
+++||.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 46799999887777 56889999999999987543
No 226
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=33.48 E-value=49 Score=30.21 Aligned_cols=40 Identities=20% Similarity=0.308 Sum_probs=24.9
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|.....+++||+.. +.|.+ -..|++.|.++||+|+.++-.
T Consensus 1 M~~~~~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 1 MQRNTLKHRILITG--GAGFI--GGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp ------CCEEEEET--TTSHH--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCcccCCCeEEEEC--CCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 44334467777664 34443 347899999999999988654
No 227
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=33.35 E-value=44 Score=29.56 Aligned_cols=28 Identities=11% Similarity=0.165 Sum_probs=21.8
Q ss_pred CcEEEEEcCC-Ccc-CHHHHHHHHHHHHhC
Q 048562 7 PVEMFFFPYV-GGG-HQIPMVDIARIFAAH 34 (464)
Q Consensus 7 ~~~vl~~~~~-~~G-H~~p~l~la~~L~~r 34 (464)
|+|||+..++ ..| .+||...++++|...
T Consensus 2 m~~VLvTGF~PF~~~~~NPS~~~v~~L~~~ 31 (223)
T 3ro0_A 2 EKKVLLTGFDPFGGETVNPSWEAVKRLNGA 31 (223)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHHTTTC
T ss_pred CCEEEEEeCCCCCCCCCChHHHHHHHhccc
Confidence 6789888866 223 579999999999874
No 228
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=33.17 E-value=68 Score=31.39 Aligned_cols=42 Identities=17% Similarity=0.027 Sum_probs=33.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHh-CCCcEEEEeCCcchhhh
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAA-HGAKSTIITSPKHALSF 50 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~-rGh~Vt~~~~~~~~~~~ 50 (464)
-+++...|+.|-..-++.+|...+. .|..|.|++.....+.+
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l 244 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQL 244 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHH
Confidence 3567777899999999999999987 49999999887655433
No 229
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=33.12 E-value=55 Score=29.13 Aligned_cols=30 Identities=20% Similarity=0.222 Sum_probs=23.3
Q ss_pred CCCCEEEeCCCch-------hhHHHHHHcCCCeEEEe
Q 048562 104 SRPDCIVHDMFHH-------WSADVINSMNIPRIVFN 133 (464)
Q Consensus 104 ~~pD~Vi~D~~~~-------~~~~~A~~~giP~v~~~ 133 (464)
.+||+|++|.... .++.+.-.+|+|+|.+.
T Consensus 106 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 106 CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 5799999998742 35556667899999984
No 230
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=33.10 E-value=32 Score=31.62 Aligned_cols=34 Identities=12% Similarity=0.035 Sum_probs=27.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
+|+||.|+-.+..|. .+|+.|+++||+|+++...
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 478999998877664 6789999999999988543
No 231
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=32.81 E-value=60 Score=25.15 Aligned_cols=37 Identities=16% Similarity=0.390 Sum_probs=23.7
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHHc-------CCCeEEEecc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINSM-------NIPRIVFNGN 135 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~~-------giP~v~~~~~ 135 (464)
+.+.+.+||+||.|...+ .+..+++.+ .+|.|.++..
T Consensus 41 ~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 41 EALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 445567899999997654 344444332 5788877543
No 232
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=32.78 E-value=1.8e+02 Score=25.74 Aligned_cols=35 Identities=20% Similarity=0.078 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|.|.++++.++.| --..+|+.|+++|++|.+....
T Consensus 25 ~~k~vlVTGas~g---IG~~la~~l~~~G~~v~i~~~r 59 (267)
T 4iiu_A 25 MSRSVLVTGASKG---IGRAIARQLAADGFNIGVHYHR 59 (267)
T ss_dssp CCCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3456666665433 3468899999999999876654
No 233
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=32.77 E-value=22 Score=33.29 Aligned_cols=37 Identities=11% Similarity=-0.062 Sum_probs=27.5
Q ss_pred EEEEcCCCccCH--------------HHHHHHHHHHHhCCCcEEEEeCCcc
Q 048562 10 MFFFPYVGGGHQ--------------IPMVDIARIFAAHGAKSTIITSPKH 46 (464)
Q Consensus 10 vl~~~~~~~GH~--------------~p~l~la~~L~~rGh~Vt~~~~~~~ 46 (464)
||+...|+.=.+ ..-..||+++.++|++|+|+..+..
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 666666665444 2567889999999999999987643
No 234
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=32.61 E-value=42 Score=30.26 Aligned_cols=41 Identities=7% Similarity=0.042 Sum_probs=32.0
Q ss_pred hHHHHHHhhhhCCCCEEEeCCCch------hhHHHHHHcCCCeEEEe
Q 048562 93 LQEPLKSLLVDSRPDCIVHDMFHH------WSADVINSMNIPRIVFN 133 (464)
Q Consensus 93 ~~~~l~~~l~~~~pD~Vi~D~~~~------~~~~~A~~~giP~v~~~ 133 (464)
....+.+++++..||+|++-.... .+..+|.++|+|+++..
T Consensus 101 ~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v 147 (252)
T 1efp_B 101 VAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFA 147 (252)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccE
Confidence 345566666667899999987552 68889999999999874
No 235
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=32.37 E-value=2.1e+02 Score=25.36 Aligned_cols=34 Identities=15% Similarity=0.029 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
-|+++++.++.| --..+|+.|+++|++|.++...
T Consensus 10 gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 10 DKVVLVTGGARG---QGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEccc
Confidence 356666665442 3468899999999999987643
No 236
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=32.29 E-value=84 Score=29.67 Aligned_cols=36 Identities=19% Similarity=0.154 Sum_probs=23.6
Q ss_pred EEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccC
Q 048562 254 VLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKI 291 (464)
Q Consensus 254 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~ 291 (464)
+|+.+.||-+ .---...++++|.+.|+.++|.....
T Consensus 5 i~i~~GGTgG--Hi~palala~~L~~~g~~V~~vg~~~ 40 (365)
T 3s2u_A 5 VLIMAGGTGG--HVFPALACAREFQARGYAVHWLGTPR 40 (365)
T ss_dssp EEEECCSSHH--HHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEcCCCHH--HHHHHHHHHHHHHhCCCEEEEEECCc
Confidence 5555555543 12224567889999999999987543
No 237
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=32.28 E-value=43 Score=29.94 Aligned_cols=37 Identities=19% Similarity=0.225 Sum_probs=29.7
Q ss_pred CCCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCcEEEE
Q 048562 5 SSPVEMFFFPY--VGGGHQIPMVDIARIFAAHGAKSTII 41 (464)
Q Consensus 5 ~~~~~vl~~~~--~~~GH~~p~l~la~~L~~rGh~Vt~~ 41 (464)
.+|++.+|++. .+-|=..-.+.|++.|+++|.+|.++
T Consensus 18 ~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~f 56 (242)
T 3qxc_A 18 YFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILL 56 (242)
T ss_dssp -CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEE
Confidence 35666666553 37888889999999999999999998
No 238
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=32.22 E-value=61 Score=25.82 Aligned_cols=38 Identities=24% Similarity=0.252 Sum_probs=24.8
Q ss_pred HHhhhhCCCCEEEeCCCch--hhHHHHHH-------cCCCeEEEecc
Q 048562 98 KSLLVDSRPDCIVHDMFHH--WSADVINS-------MNIPRIVFNGN 135 (464)
Q Consensus 98 ~~~l~~~~pD~Vi~D~~~~--~~~~~A~~-------~giP~v~~~~~ 135 (464)
.+.+++.+||+||.|.... .+..+++. .++|.|.++..
T Consensus 44 l~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 44 VRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp HHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC
T ss_pred HHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC
Confidence 3556678899999997654 24444432 36788887654
No 239
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=32.13 E-value=39 Score=31.29 Aligned_cols=35 Identities=20% Similarity=0.129 Sum_probs=27.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
.+|+||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 19 ~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 19 SHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred ccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 467899999776554 57899999999999987554
No 240
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=32.08 E-value=67 Score=24.28 Aligned_cols=39 Identities=26% Similarity=0.441 Sum_probs=25.3
Q ss_pred HHhhhhCCCCEEEeCCCch--hhHHHHHH-----cCCCeEEEeccc
Q 048562 98 KSLLVDSRPDCIVHDMFHH--WSADVINS-----MNIPRIVFNGNC 136 (464)
Q Consensus 98 ~~~l~~~~pD~Vi~D~~~~--~~~~~A~~-----~giP~v~~~~~~ 136 (464)
.+.+.+.+||+||.|...+ .+..+++. .++|.|.++...
T Consensus 40 ~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 40 LAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp HHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred HHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 3556677899999997654 34444433 257888876543
No 241
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=31.85 E-value=42 Score=26.93 Aligned_cols=38 Identities=13% Similarity=0.247 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHH-HHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMV-DIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l-~la~~L~~rGh~Vt~~~~~ 44 (464)
|+|++++-....|+..-+. .|++.|.++|++|.++.-.
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 4567666655677765443 4677777889999887654
No 242
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=31.75 E-value=2.3e+02 Score=23.77 Aligned_cols=145 Identities=18% Similarity=0.177 Sum_probs=76.9
Q ss_pred cEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHH
Q 048562 253 SVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQL 332 (464)
Q Consensus 253 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~ 332 (464)
+.|-|-+||.. +....++....|+.++..+-..+..- ++ +|+.+.+ |+..
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa------HR--------~p~~~~~-------------~~~~- 62 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA------HR--------TPDRLFS-------------FAEQ- 62 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TT--------CHHHHHH-------------HHHH-
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc------cC--------CHHHHHH-------------HHHH-
Confidence 45667778776 56677888888888888766555443 21 4433221 1100
Q ss_pred HHhcccCceeeccccch----hhHHHHHHcCCceeecccccc---cchhHHHHHhhhcceEEeccccccCCCCCCC--Cc
Q 048562 333 LILEHTAVGGFMTHCGW----NSTLESVSAGVPMVTWPITAE---QFSNEKLISDVLKIGVKVGSVNWVSWSTEPS--AA 403 (464)
Q Consensus 333 ~lL~~~~~~~~ItHGG~----~s~~Eal~~GvP~v~~P~~~D---Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~~--~~ 403 (464)
...-.+++||.=+|. .++.-++ .-+|+|.+|...- -.+-..-++ +.--|+-+-.- ..+ +.
T Consensus 63 --a~~~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~v-qmP~GvPVatV-------~I~~a~~ 131 (174)
T 3kuu_A 63 --AEANGLHVIIAGNGGAAHLPGMLAAK-TLVPVLGVPVQSAALSGVDSLYSIV-QMPRGIPVGTL-------AIGKAGA 131 (174)
T ss_dssp --TTTTTCSEEEEEEESSCCHHHHHHHT-CSSCEEEEEECCTTTTTHHHHHHHH-TCCTTSCCEEC-------CSSHHHH
T ss_pred --HHhCCCcEEEEECChhhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHhh-hCCCCCeeEEE-------EeCCccc
Confidence 011122347776663 3444443 3689999998532 222223332 32223212111 000 12
Q ss_pred cChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhc
Q 048562 404 VGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEE 443 (464)
Q Consensus 404 ~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~ 443 (464)
.++.-+...|-.+ .|+ .++++.+.++++.++.+.+
T Consensus 132 ~nAa~lAa~ILa~-~d~----~l~~kl~~~r~~~~~~v~~ 166 (174)
T 3kuu_A 132 ANAALLAAQILAL-HDT----ELAGRLAHWRQSQTDDVLD 166 (174)
T ss_dssp HHHHHHHHHHHHT-TCH----HHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHcC-CCH----HHHHHHHHHHHHHHHHHHh
Confidence 3455555555443 455 7999999999988865544
No 243
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=31.72 E-value=76 Score=32.87 Aligned_cols=40 Identities=13% Similarity=0.219 Sum_probs=29.5
Q ss_pred HHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEecc
Q 048562 96 PLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 96 ~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~~ 135 (464)
.+.+.|++.+||+||+=.+.- ....+.......++-++++
T Consensus 66 ~~~~~l~~~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 66 LWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (660)
T ss_dssp HHHHHHHHHCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEcCcccccCHHHHhcCCCCeEEecCC
Confidence 456777888999999976643 4555666677778888876
No 244
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=31.71 E-value=48 Score=30.09 Aligned_cols=37 Identities=16% Similarity=0.189 Sum_probs=31.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
|..|.|..-|+-|-..-.+.||..|+++|++|.++=.
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~ 38 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGC 38 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEec
Confidence 4566776677999999999999999999999998843
No 245
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=31.67 E-value=50 Score=29.13 Aligned_cols=35 Identities=11% Similarity=0.132 Sum_probs=28.8
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEE
Q 048562 7 PVEMFFFPY-VGGGHQIPMVDIARIFAAHGAKSTII 41 (464)
Q Consensus 7 ~~~vl~~~~-~~~GH~~p~l~la~~L~~rGh~Vt~~ 41 (464)
|..+++... .+-|-..-...|++.|+++|++|.++
T Consensus 4 mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~ 39 (228)
T 3of5_A 4 MKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCL 39 (228)
T ss_dssp CEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEe
Confidence 445555554 38899999999999999999999997
No 246
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=31.62 E-value=73 Score=27.45 Aligned_cols=37 Identities=14% Similarity=0.126 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+||+|+..++.- ..-+....+.|.+.|++|++++..
T Consensus 9 ~~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 9 SKRILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp CCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcC
Confidence 4688888877554 455666778899999999999885
No 247
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=31.59 E-value=40 Score=30.06 Aligned_cols=32 Identities=19% Similarity=0.212 Sum_probs=27.5
Q ss_pred cCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 14 PYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 14 ~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
.-++-|-..-.+.||..|+++|++|.++-...
T Consensus 10 ~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 10 GKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp SSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 35588999999999999999999999986543
No 248
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=31.56 E-value=72 Score=24.22 Aligned_cols=38 Identities=18% Similarity=0.263 Sum_probs=23.3
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHH-----cCCCeEEEeccc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINS-----MNIPRIVFNGNC 136 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~-----~giP~v~~~~~~ 136 (464)
+.+++.+||+||.|.... .+..+.+. -++|.|.++...
T Consensus 45 ~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 45 ELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp HHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 455778899999997644 23333332 257888876544
No 249
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=31.54 E-value=28 Score=27.40 Aligned_cols=34 Identities=9% Similarity=0.032 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
++.+|+++.. |.+- ..+++.|.++|++|+++...
T Consensus 5 ~~~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred cCCcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4567888865 4332 46789999999999988654
No 250
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=31.53 E-value=37 Score=31.01 Aligned_cols=35 Identities=20% Similarity=0.003 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|++.||.|+-.+..| ..+|..|+++||+|+++...
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 456789999665544 46899999999999987554
No 251
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=31.48 E-value=75 Score=24.52 Aligned_cols=39 Identities=10% Similarity=0.086 Sum_probs=24.4
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
|+..+++.+||++-- +-.-...+.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~~iLivdd----~~~~~~~l~~~L~~~g~~v~~~~~ 39 (142)
T 3cg4_A 1 MSLAEHKGDVMIVDD----DAHVRIAVKTILSDAGFHIISADS 39 (142)
T ss_dssp -----CCCEEEEECS----CHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCCCCCCeEEEEcC----CHHHHHHHHHHHHHCCeEEEEeCC
Confidence 666667888888753 455566778888888988765443
No 252
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=31.47 E-value=57 Score=29.22 Aligned_cols=40 Identities=8% Similarity=0.101 Sum_probs=26.1
Q ss_pred CCCCcEEEEEcCCCc--cCHHHHHH-HHHHHHhCCCcEEEEeC
Q 048562 4 KSSPVEMFFFPYVGG--GHQIPMVD-IARIFAAHGAKSTIITS 43 (464)
Q Consensus 4 ~~~~~~vl~~~~~~~--GH~~p~l~-la~~L~~rGh~Vt~~~~ 43 (464)
.+.|+||+++....+ |...-++. +++.|.+.|++|.++--
T Consensus 31 ~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 31 STHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 356788888776533 55444444 56666677999887643
No 253
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=31.31 E-value=40 Score=30.01 Aligned_cols=35 Identities=14% Similarity=0.228 Sum_probs=28.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
..++||.|+..|..|- .||+.|+++||+|+.+...
T Consensus 4 ~~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 3567999999997774 5899999999999977663
No 254
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=31.21 E-value=65 Score=30.48 Aligned_cols=40 Identities=8% Similarity=0.123 Sum_probs=34.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
+..+|+++..++-|=-.-+..|+..|..+|++|.++....
T Consensus 78 ~~~~I~i~G~~G~GKSTl~~~L~~~l~~~g~kV~vi~~Dp 117 (355)
T 3p32_A 78 NAHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDP 117 (355)
T ss_dssp CSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEEEC-
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHHHhCCCceEEEecCC
Confidence 3567888888899999999999999999999999987653
No 255
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=30.77 E-value=36 Score=31.10 Aligned_cols=38 Identities=3% Similarity=-0.142 Sum_probs=27.9
Q ss_pred CcEEEEEcCCCcc-C--HHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGG-H--QIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~G-H--~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+||+++..+... + ......++++|.++||+|.++...
T Consensus 1 mm~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 1 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CCEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred CceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 3689998876321 1 234567999999999999988764
No 256
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=30.58 E-value=52 Score=30.19 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=23.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
+|+++. +.|.+ -..|+++|.++||+|+.++-..
T Consensus 13 ~ilVtG--atG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIFG--GTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEET--TTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEEC--CCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 566553 34444 3468899999999999887654
No 257
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=30.50 E-value=46 Score=29.22 Aligned_cols=68 Identities=7% Similarity=-0.003 Sum_probs=42.5
Q ss_pred CCcEEEEEcCCCcc--CHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCc
Q 048562 6 SPVEMFFFPYVGGG--HQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMS 83 (464)
Q Consensus 6 ~~~~vl~~~~~~~G--H~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (464)
+.+|||+..++-.| -+||...++++|... + . +..+....+|.
T Consensus 2 ~~m~VLvTGF~PF~~~~~NPS~~~v~~L~~~---i-----~----------------~~~i~~~~lPv------------ 45 (215)
T 3giu_A 2 NAMHILVTGFAPFDNQNINPSWEAVTQLEDI---I-----G----------------THTIDKLKLPT------------ 45 (215)
T ss_dssp --CEEEEEEECCCTTCSCCHHHHHHHHSCSE---E-----T----------------TEEEEEEEECS------------
T ss_pred CCcEEEEEecCCCCCCCCChHHHHHHHhccc---c-----C----------------CcEEEEEEece------------
Confidence 46789888876333 479999999999762 1 0 11233344542
Q ss_pred ccHHHHHhhhHHHHHHhhhhCCCCEEEeCCC
Q 048562 84 ATPRTDTSMLQEPLKSLLVDSRPDCIVHDMF 114 (464)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~ 114 (464)
.| ....+.+.+++++.+||+||+=..
T Consensus 46 -~~----~~~~~~l~~~i~~~~Pd~Vi~vG~ 71 (215)
T 3giu_A 46 -SF----KKVDNIINKTLASNHYDVVLAIGQ 71 (215)
T ss_dssp -CH----HHHHHHHHHHHHHSCCSEEEEEEE
T ss_pred -eh----HhHHHHHHHHHHHhCCCEEEEecc
Confidence 11 223566777888899999998644
No 258
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=30.38 E-value=79 Score=24.03 Aligned_cols=38 Identities=21% Similarity=0.280 Sum_probs=23.9
Q ss_pred HHhhhhCCCCEEEeCCCch--hhHHHHH---H----cCCCeEEEecc
Q 048562 98 KSLLVDSRPDCIVHDMFHH--WSADVIN---S----MNIPRIVFNGN 135 (464)
Q Consensus 98 ~~~l~~~~pD~Vi~D~~~~--~~~~~A~---~----~giP~v~~~~~ 135 (464)
.+.+.+.+||+||.|.... .+..+.+ . -++|.|.++..
T Consensus 40 ~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 40 LQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp HHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 3456667899999997654 2333332 2 26788887543
No 259
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=30.36 E-value=23 Score=35.12 Aligned_cols=31 Identities=13% Similarity=-0.017 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEe
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIIT 42 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~ 42 (464)
|+||+++-.+-. -+.-|..|+++||+|+++=
T Consensus 1 Mk~VvVIGaG~~-----GL~aA~~La~~G~~V~VlE 31 (501)
T 4dgk_A 1 MKPTTVIGAGFG-----GLALAIRLQAAGIPVLLLE 31 (501)
T ss_dssp CCCEEEECCHHH-----HHHHHHHHHHTTCCEEEEC
T ss_pred CCCEEEECCcHH-----HHHHHHHHHHCCCcEEEEc
Confidence 677888865432 3677889999999999984
No 260
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=30.35 E-value=2.2e+02 Score=24.14 Aligned_cols=103 Identities=17% Similarity=0.098 Sum_probs=54.4
Q ss_pred cccccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCC
Q 048562 240 GKILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGES 319 (464)
Q Consensus 240 ~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 319 (464)
.++.++|... +..+|+.|... -......++..+.+-+++=++... |... +...+.
T Consensus 23 ~~lg~~La~~---g~~lV~GGg~~----GiM~aa~~gA~~~gG~~iGv~p~~----------------l~~~--e~~~~~ 77 (191)
T 1t35_A 23 AELGVYMAEQ---GIGLVYGGSRV----GLMGTIADAIMENGGTAIGVMPSG----------------LFSG--EVVHQN 77 (191)
T ss_dssp HHHHHHHHHT---TCEEEECCCCS----HHHHHHHHHHHTTTCCEEEEEETT----------------CCHH--HHTTCC
T ss_pred HHHHHHHHHC---CCEEEECCCcc----cHHHHHHHHHHHcCCeEEEEeCch----------------hccc--ccccCC
Confidence 4555555544 25666665442 144455555555566655554332 2211 000000
Q ss_pred CCcEEecCccc-HHHHhcccCceeeccccchhhHHHH---H------HcCCceeeccc
Q 048562 320 KRGLIIRGWAP-QLLILEHTAVGGFMTHCGWNSTLES---V------SAGVPMVTWPI 367 (464)
Q Consensus 320 ~~nv~v~~~vp-q~~lL~~~~~~~~ItHGG~~s~~Ea---l------~~GvP~v~~P~ 367 (464)
-.+..+++..+ ...++..-+...++--||.||+-|. + .+++|++.+-.
T Consensus 78 ~~~~~~~~~~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 78 LTELIEVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp CSEEEEESHHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred CCccccCCCHHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 22334445555 3444433333468889999998776 4 37899999864
No 261
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=30.29 E-value=2.1e+02 Score=25.77 Aligned_cols=48 Identities=10% Similarity=0.009 Sum_probs=38.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHH--------HHhC-CCcEEEEeCCcchhhhhhh
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARI--------FAAH-GAKSTIITSPKHALSFQKS 53 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~--------L~~r-Gh~Vt~~~~~~~~~~~~~~ 53 (464)
++.+|++.+.++-.|-....-++.. |..+ |++|.+++..-..+.+...
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~a 175 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKK 175 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHH
Confidence 4678999999999999998888877 9999 9999998876555444443
No 262
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=30.23 E-value=23 Score=32.72 Aligned_cols=33 Identities=21% Similarity=0.359 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC-----C-CcEEEEeC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAH-----G-AKSTIITS 43 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~r-----G-h~Vt~~~~ 43 (464)
.|+||.|+..|..|. .+|..|.+. | |+|+++..
T Consensus 7 ~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 457999998776663 568888888 9 99999876
No 263
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=30.10 E-value=59 Score=31.18 Aligned_cols=73 Identities=10% Similarity=-0.005 Sum_probs=47.0
Q ss_pred CCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHHHHhcccCceeec
Q 048562 265 LSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQLLILEHTAVGGFM 344 (464)
Q Consensus 265 ~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~~lL~~~~~~~~I 344 (464)
...+....+.++|.+...+.||.+.+. .... ++.++++...|-++|+. ||
T Consensus 93 td~~Ra~dL~~af~Dp~i~aI~~~rGG----------yga~------------------rlLp~LD~~~i~~~PK~--fi 142 (371)
T 3tla_A 93 TIKERAQEFNELVYNPDITCIMSTIGG----------DNSN------------------SLLPFLDYDAIIANPKI--II 142 (371)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEESCCC----------SCGG------------------GGGGGSCHHHHHHSCCE--EE
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccc----------ccHH------------------HHHhhcChhhHHhCCcE--EE
Confidence 346678889999999999999998776 1222 24455555555555555 66
Q ss_pred cccchhhHHHHHH--cCCceeeccc
Q 048562 345 THCGWNSTLESVS--AGVPMVTWPI 367 (464)
Q Consensus 345 tHGG~~s~~Eal~--~GvP~v~~P~ 367 (464)
-......+.-|++ .|++.+--|.
T Consensus 143 GySDiTaL~~ai~~k~Gl~T~hGP~ 167 (371)
T 3tla_A 143 GYSDTTALLAGIYAKTGLITFYGPA 167 (371)
T ss_dssp ECGGGHHHHHHHHHHHCBCEEECCC
T ss_pred EechHHHHHHHHHHHcCCEEEECcc
Confidence 6666666666554 3666655553
No 264
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=29.75 E-value=1.3e+02 Score=29.11 Aligned_cols=96 Identities=16% Similarity=0.041 Sum_probs=54.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhh-hhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCccc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALS-FQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSAT 85 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (464)
+.|||++.. | ...+.+++++.+.|++|.++.+...... .... --.++.++ | .....
T Consensus 2 ~k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~---------ad~~~~~~-p--------~~~~~ 58 (451)
T 1ulz_A 2 VNKVLVANR---G--EIAVRIIRACKELGIPTVAIYNEVESTARHVKL---------ADEAYMIG-T--------DPLDT 58 (451)
T ss_dssp CSSEEECCC---H--HHHHHHHHHHHHHTCCEEEEECGGGTTCHHHHH---------SSEEEECC-S--------STTHH
T ss_pred CceEEEECC---c--HHHHHHHHHHHHcCCeEEEEechhhcccchhhh---------CcEEEEcC-C--------Ccccc
Confidence 356887753 3 3467899999999999998876433211 1111 01222221 1 00001
Q ss_pred HHHHHhhhHHHHHHhhhhCCCCEEEeCCCc----hhhHHHHHHcCCCeE
Q 048562 86 PRTDTSMLQEPLKSLLVDSRPDCIVHDMFH----HWSADVINSMNIPRI 130 (464)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~----~~~~~~A~~~giP~v 130 (464)
+. -.+.+.+++++.++|+|+...-+ .....+++.+|+|++
T Consensus 59 ~~-----d~~~l~~~~~~~~~d~v~~~~g~~~e~~~~~~~~~~~gi~~~ 102 (451)
T 1ulz_A 59 YL-----NKQRIINLALEVGADAIHPGYGFLAENAEFAKMCEEAGITFI 102 (451)
T ss_dssp HH-----CHHHHHHHHHHTTCCEEECCSSTTTTCHHHHHHHHHTTCEES
T ss_pred cC-----CHHHHHHHHHHcCCCEEEECCCccccCHHHHHHHHHCCCeEE
Confidence 10 13567777888899999976321 123456677898865
No 265
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=29.74 E-value=2.1e+02 Score=25.40 Aligned_cols=32 Identities=22% Similarity=0.119 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
|+++++.++.| --..+|+.|+++|++|.++.-
T Consensus 16 k~~lVTGas~g---IG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAARG---QGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEec
Confidence 56666655432 346789999999999998754
No 266
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=29.65 E-value=48 Score=30.67 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=27.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKH 46 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 46 (464)
++||+++..+ ....+++++.++||+|.++.....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 4689888775 567899999999999998887643
No 267
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=29.64 E-value=92 Score=22.90 Aligned_cols=37 Identities=11% Similarity=0.117 Sum_probs=23.4
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHH-----cCCCeEEEecc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINS-----MNIPRIVFNGN 135 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~-----~giP~v~~~~~ 135 (464)
+.+.+.+||+||.|...+ .+..+.+. -++|.+.++..
T Consensus 39 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 39 KKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 455567899999997654 34444333 25787777543
No 268
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=29.57 E-value=1.6e+02 Score=27.73 Aligned_cols=90 Identities=10% Similarity=-0.048 Sum_probs=54.2
Q ss_pred cEEEEEcCCCcc----CHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCc
Q 048562 8 VEMFFFPYVGGG----HQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMS 83 (464)
Q Consensus 8 ~~vl~~~~~~~G----H~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (464)
.+++++..++.+ ...-+..+.+.|.+.+.+|.+++.....+.+... ..++.+..+ .
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~-------~~~v~~~~~-------------~ 291 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTL-------PRNVRAVGW-------------T 291 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCSC-------CTTEEEESS-------------C
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhccC-------CCcEEEEcc-------------C
Confidence 456777777663 3345778888898889999988876543332221 123443322 0
Q ss_pred ccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEE
Q 048562 84 ATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVF 132 (464)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~ 132 (464)
. +.+++.. -|++|+..... ...=|-.+|+|.|.+
T Consensus 292 -~-----------~~~ll~~--ad~~v~~~G~~-t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 292 -P-----------LHTLLRT--CTAVVHHGGGG-TVMTAIDAGIPQLLA 325 (398)
T ss_dssp -C-----------HHHHHTT--CSEEEECCCHH-HHHHHHHHTCCEEEC
T ss_pred -C-----------HHHHHhh--CCEEEECCCHH-HHHHHHHhCCCEEEc
Confidence 1 1233332 69999876543 344455679999996
No 269
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=29.56 E-value=68 Score=28.35 Aligned_cols=30 Identities=23% Similarity=0.286 Sum_probs=22.5
Q ss_pred CCCCEEEeCCCch-------hhHHHHHHcCCCeEEEe
Q 048562 104 SRPDCIVHDMFHH-------WSADVINSMNIPRIVFN 133 (464)
Q Consensus 104 ~~pD~Vi~D~~~~-------~~~~~A~~~giP~v~~~ 133 (464)
.+||+|++|.... .+..+.-.+|+|+|.+.
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 4799999998754 24445666799999984
No 270
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=29.43 E-value=70 Score=23.80 Aligned_cols=38 Identities=21% Similarity=0.199 Sum_probs=24.2
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHH-----cCCCeEEEeccc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINS-----MNIPRIVFNGNC 136 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~-----~giP~v~~~~~~ 136 (464)
+.+.+.+||+||.|...+ .+..+++. -++|.+.++...
T Consensus 41 ~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 41 EKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp HHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred HHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 344556899999997654 34444443 257888876543
No 271
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=29.35 E-value=1.5e+02 Score=26.38 Aligned_cols=33 Identities=21% Similarity=0.123 Sum_probs=23.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+++++.++.| --..+|+.|+++|++|.++.-.
T Consensus 14 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 14 KVAFITGAARG---QGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCeEEEEecc
Confidence 45666654432 3457899999999999887643
No 272
>1a2z_A Pyrrolidone carboxyl peptidase; N-pyroglutamate hydrolysis; 1.73A {Thermococcus litoralis} SCOP: c.56.4.1
Probab=29.23 E-value=53 Score=28.91 Aligned_cols=28 Identities=21% Similarity=0.406 Sum_probs=21.0
Q ss_pred CcEEEEEcCC--CccCHHHHHHHHHHHHhC
Q 048562 7 PVEMFFFPYV--GGGHQIPMVDIARIFAAH 34 (464)
Q Consensus 7 ~~~vl~~~~~--~~GH~~p~l~la~~L~~r 34 (464)
|.+||+..++ +.--+||...++++|...
T Consensus 1 mk~VLvTGF~PF~~~~~NPS~~~v~~L~~~ 30 (220)
T 1a2z_A 1 MKKVLITGFEPFGGDSKNPTEQIAKYFDRK 30 (220)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHHHTTC
T ss_pred CCEEEEeeccCCCCCCCCcHHHHHHHhhcc
Confidence 4458877765 334568999999999986
No 273
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=29.03 E-value=2.1e+02 Score=25.57 Aligned_cols=33 Identities=24% Similarity=0.124 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
.|+++++.++.| --..+|+.|+++|++|.++..
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 356666665442 346789999999999998764
No 274
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=28.92 E-value=3.2e+02 Score=24.51 Aligned_cols=31 Identities=19% Similarity=0.189 Sum_probs=22.9
Q ss_pred CCCCEEEeCC-Cch-hhHHHHHHcCCCeEEEec
Q 048562 104 SRPDCIVHDM-FHH-WSADVINSMNIPRIVFNG 134 (464)
Q Consensus 104 ~~pD~Vi~D~-~~~-~~~~~A~~~giP~v~~~~ 134 (464)
..||+||+-. ..- .+..=|..+|||.|.+.-
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivD 189 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALAD 189 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCC
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEec
Confidence 4799888644 332 577778899999999853
No 275
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=28.85 E-value=2e+02 Score=26.33 Aligned_cols=104 Identities=8% Similarity=0.055 Sum_probs=62.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcc--hhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKH--ALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDT 80 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (464)
.+++||+++..+. || .+..|..+-.+- ..+|..+.++.. ....++ .++.+..+|..
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~---------~gIp~~~~~~~-------- 152 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQ---------HGLPFRHFPIT-------- 152 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHH---------TTCCEEECCCC--------
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHH---------cCCCEEEeCCC--------
Confidence 4578998888754 54 455555554443 468877765432 222222 25666665421
Q ss_pred CCcccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEec
Q 048562 81 DMSATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNG 134 (464)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~ 134 (464)
. . .......++.+.|++.++|+||.=.+.- ....+...+.-.++-+++
T Consensus 153 -~-~----~r~~~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHp 201 (292)
T 3lou_A 153 -A-D----TKAQQEAQWLDVFETSGAELVILARYMQVLSPEASARLANRAINIHH 201 (292)
T ss_dssp -S-S----CHHHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred -c-C----CHHHHHHHHHHHHHHhCCCEEEecCchhhCCHHHHhhhcCCeEEeCC
Confidence 0 0 1112346778889999999999987653 455566666667787743
No 276
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=28.84 E-value=74 Score=23.75 Aligned_cols=39 Identities=13% Similarity=0.229 Sum_probs=24.7
Q ss_pred HHhhhhCCCCEEEeCCCch--hhHHHHHHc----CCCeEEEeccc
Q 048562 98 KSLLVDSRPDCIVHDMFHH--WSADVINSM----NIPRIVFNGNC 136 (464)
Q Consensus 98 ~~~l~~~~pD~Vi~D~~~~--~~~~~A~~~----giP~v~~~~~~ 136 (464)
.+.+.+.+||+||.|...+ .+..+++.+ .+|.|.++...
T Consensus 39 ~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 39 REIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred HHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 3455667899999997654 344444433 57777776543
No 277
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=28.78 E-value=71 Score=26.64 Aligned_cols=40 Identities=8% Similarity=-0.125 Sum_probs=30.9
Q ss_pred hhHHHHHHhhhhCCCCEEEeCCCch---hhHHHHHHcCCCeEEEe
Q 048562 92 MLQEPLKSLLVDSRPDCIVHDMFHH---WSADVINSMNIPRIVFN 133 (464)
Q Consensus 92 ~~~~~l~~~l~~~~pD~Vi~D~~~~---~~~~~A~~~giP~v~~~ 133 (464)
...+.+.++++ +||+|++-.... .+..+|.++++|+++-.
T Consensus 58 ~~a~~l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~sdv 100 (166)
T 3fet_A 58 AVSEGILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTATEI 100 (166)
T ss_dssp HHHHHHHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCceeeE
Confidence 34556666666 899999987543 47779999999999864
No 278
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=28.76 E-value=1.1e+02 Score=23.15 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=28.4
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
|+..+++.||+++-- +-.-...+.+.|.+.|++|+.+..
T Consensus 1 M~~~~~~~~ilivdd----~~~~~~~l~~~L~~~g~~v~~~~~ 39 (130)
T 3eod_A 1 MTQPLVGKQILIVED----EQVFRSLLDSWFSSLGATTVLAAD 39 (130)
T ss_dssp --CTTTTCEEEEECS----CHHHHHHHHHHHHHTTCEEEEESC
T ss_pred CCCCCCCCeEEEEeC----CHHHHHHHHHHHHhCCceEEEeCC
Confidence 666677889999854 555567788889999999987554
No 279
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=28.75 E-value=54 Score=29.27 Aligned_cols=41 Identities=17% Similarity=0.063 Sum_probs=31.6
Q ss_pred CCcEEEEEc--CCCccCHHHHHHHHHHHHhCCCcEEEEeCCcc
Q 048562 6 SPVEMFFFP--YVGGGHQIPMVDIARIFAAHGAKSTIITSPKH 46 (464)
Q Consensus 6 ~~~~vl~~~--~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 46 (464)
+|++++.+. -++-|=..-...||..|+++|++|.++=....
T Consensus 16 ~~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~ 58 (262)
T 2ph1_A 16 KIKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFL 58 (262)
T ss_dssp TCSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred cCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 355555444 44888899999999999999999999865543
No 280
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=28.64 E-value=64 Score=28.31 Aligned_cols=42 Identities=12% Similarity=0.049 Sum_probs=23.1
Q ss_pred CCCCCCcEEEEEc-CCCc----cCHHH-HH-HHHHHHHhCCCcEEEEeC
Q 048562 2 DSKSSPVEMFFFP-YVGG----GHQIP-MV-DIARIFAAHGAKSTIITS 43 (464)
Q Consensus 2 ~~~~~~~~vl~~~-~~~~----GH~~p-~l-~la~~L~~rGh~Vt~~~~ 43 (464)
.....|+|||++. .|-. +-++- ++ .+++.|.+.||+|.++--
T Consensus 20 ~~~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 20 FQSNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp ----CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred cccccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 3445688887776 4432 23443 22 345566678999987654
No 281
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=28.62 E-value=3.2e+02 Score=24.41 Aligned_cols=34 Identities=18% Similarity=0.136 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
.|+++++.++.| --..+|+.|+++|++|.++...
T Consensus 28 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 28 SPVALITGAGSG---IGRATALALAADGVTVGALGRT 61 (283)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356666665443 3467899999999999887654
No 282
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=28.37 E-value=47 Score=29.59 Aligned_cols=39 Identities=15% Similarity=0.229 Sum_probs=30.2
Q ss_pred CcEEEEEc--CCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 7 PVEMFFFP--YVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 7 ~~~vl~~~--~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
+++++.+. -++-|-..-...||..|+++|++|.++-...
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 44444443 4578888899999999999999999986554
No 283
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=28.36 E-value=2.6e+02 Score=23.28 Aligned_cols=145 Identities=12% Similarity=0.124 Sum_probs=78.1
Q ss_pred cEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHH
Q 048562 253 SVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQL 332 (464)
Q Consensus 253 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~ 332 (464)
|.|-|-+||.. +....++....|+.++..+-..+..- ++ .|+.+.+ |+..
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HR--------tp~~l~~-------------~~~~- 55 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA------HR--------TPDKMFD-------------YAET- 55 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TT--------CHHHHHH-------------HHHH-
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC------cC--------CHHHHHH-------------HHHH-
Confidence 46777788876 56667888888888888665555443 21 4433222 1111
Q ss_pred HHhcccCceeeccccch----hhHHHHHHcCCceeecccccc---cchhHHHHHhhhcceEEeccccccCCCCCCC--Cc
Q 048562 333 LILEHTAVGGFMTHCGW----NSTLESVSAGVPMVTWPITAE---QFSNEKLISDVLKIGVKVGSVNWVSWSTEPS--AA 403 (464)
Q Consensus 333 ~lL~~~~~~~~ItHGG~----~s~~Eal~~GvP~v~~P~~~D---Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~~--~~ 403 (464)
+....+++||.=+|. .++.-++ .-+|+|.+|...- -.+-..-++ +.--|+-+..-. .+ +.
T Consensus 56 --~~~~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~v-qmp~gvpVatV~-------I~~ag~ 124 (166)
T 3oow_A 56 --AKERGLKVIIAGAGGAAHLPGMVAAK-TTLPVLGVPVKSSTLNGQDSLLSIV-QMPAGIPVATFA-------IGMAGA 124 (166)
T ss_dssp --TTTTTCCEEEEEECSSCCHHHHHHHT-CSSCEEEEECCCTTTTTHHHHHHHH-TCCTTSCCEECC-------STHHHH
T ss_pred --HHhCCCcEEEEECCcchhhHHHHHhc-cCCCEEEeecCcCCCCCHHHHHHHh-cCCCCCceEEEe-------cCCccc
Confidence 111123447776664 3444443 3689999998432 222233332 443332221110 00 02
Q ss_pred cChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhc
Q 048562 404 VGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEE 443 (464)
Q Consensus 404 ~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~ 443 (464)
.++.-+...|-.+ .|+ .++++.+.++++.++.+.+
T Consensus 125 ~nAa~lAa~Il~~-~d~----~l~~kl~~~r~~~~~~v~~ 159 (166)
T 3oow_A 125 KNAALFAASILQH-TDI----NIAKALAEFRAEQTRFVLE 159 (166)
T ss_dssp HHHHHHHHHHHGG-GCH----HHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHcC-CCH----HHHHHHHHHHHHHHHHHHh
Confidence 3444555444433 455 7999999999988865544
No 284
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=28.34 E-value=47 Score=33.94 Aligned_cols=45 Identities=18% Similarity=0.211 Sum_probs=36.3
Q ss_pred CCCCCCCcEEEEEc-CCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 1 MDSKSSPVEMFFFP-YVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 1 m~~~~~~~~vl~~~-~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
|.+..++.+++|+. -++-|-..-...+|..|+++|++|.++..+.
T Consensus 1 ~~~~~~~~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 1 MQFLQNIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp CGGGSSCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCCCCEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 55545556665555 5599999999999999999999999998875
No 285
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=28.23 E-value=45 Score=25.06 Aligned_cols=94 Identities=10% Similarity=0.033 Sum_probs=52.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCccc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHG-AKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSAT 85 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rG-h~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (464)
+++|+++.. |.+ -..+++.|.++| |+|+++..... ...... ..++.+..... ..
T Consensus 5 ~~~v~I~G~---G~i--G~~~~~~l~~~g~~~v~~~~r~~~--~~~~~~------~~~~~~~~~d~-----------~~- 59 (118)
T 3ic5_A 5 RWNICVVGA---GKI--GQMIAALLKTSSNYSVTVADHDLA--ALAVLN------RMGVATKQVDA-----------KD- 59 (118)
T ss_dssp CEEEEEECC---SHH--HHHHHHHHHHCSSEEEEEEESCHH--HHHHHH------TTTCEEEECCT-----------TC-
T ss_pred cCeEEEECC---CHH--HHHHHHHHHhCCCceEEEEeCCHH--HHHHHH------hCCCcEEEecC-----------CC-
Confidence 567888744 433 246889999999 99988765432 222210 12344433321 00
Q ss_pred HHHHHhhhHHHHHHhhhhCCCCEEEeCCCch---hhHHHHHHcCCCeEEEecc
Q 048562 86 PRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH---WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~---~~~~~A~~~giP~v~~~~~ 135 (464)
...+.+.++ ++|+||.-.-.. .....+...|++++.++..
T Consensus 60 --------~~~~~~~~~--~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 102 (118)
T 3ic5_A 60 --------EAGLAKALG--GFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTED 102 (118)
T ss_dssp --------HHHHHHHTT--TCSEEEECSCGGGHHHHHHHHHHTTCEEECCCSC
T ss_pred --------HHHHHHHHc--CCCEEEECCCchhhHHHHHHHHHhCCCEEEecCc
Confidence 123334443 689988765332 2444566678887766543
No 286
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=28.20 E-value=47 Score=30.20 Aligned_cols=33 Identities=15% Similarity=0.022 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+||.|+-.+..|. .+|+.|+++||+|+++...
T Consensus 1 M~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 1 MTTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHHHHTCCEEEECSS
T ss_pred CCeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcCC
Confidence 46799998777664 5789999999999988654
No 287
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=28.20 E-value=64 Score=30.12 Aligned_cols=36 Identities=28% Similarity=0.371 Sum_probs=25.1
Q ss_pred HhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEEec
Q 048562 99 SLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVFNG 134 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~ 134 (464)
+.|...+||+||..........-.+..|+|++.+..
T Consensus 110 E~i~al~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 110 EACVAATPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp HHHHHTCCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred HHHHhcCCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 445568999999975433344445678999999853
No 288
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=28.16 E-value=46 Score=26.51 Aligned_cols=34 Identities=12% Similarity=0.115 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
+.||+++.++..| ..+|+.|.++||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 5678888765444 478999999999999998754
No 289
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=28.11 E-value=63 Score=29.57 Aligned_cols=38 Identities=13% Similarity=0.159 Sum_probs=31.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
+..|.|..-||-|=..-...||..|+++|++|.++-..
T Consensus 41 ~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 41 AKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 44566666668899999999999999999999998544
No 290
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=28.03 E-value=54 Score=28.74 Aligned_cols=34 Identities=12% Similarity=-0.085 Sum_probs=23.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
.|.++++..+.| --..+++.|+++|++|.++.-.
T Consensus 7 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 7 ARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeCC
Confidence 344555543332 3467899999999999887654
No 291
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=27.96 E-value=81 Score=24.77 Aligned_cols=42 Identities=14% Similarity=0.079 Sum_probs=27.0
Q ss_pred HHHHHhhhhCCCCEEEeCCCch--hhHHHHHH-----cCCCeEEEeccc
Q 048562 95 EPLKSLLVDSRPDCIVHDMFHH--WSADVINS-----MNIPRIVFNGNC 136 (464)
Q Consensus 95 ~~l~~~l~~~~pD~Vi~D~~~~--~~~~~A~~-----~giP~v~~~~~~ 136 (464)
....+.+++.+||+||.|.... .+..+++. -++|.|.++...
T Consensus 56 ~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 104 (150)
T 4e7p_A 56 QEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFK 104 (150)
T ss_dssp HHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 3444667778999999997653 34444433 257877776543
No 292
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=27.87 E-value=56 Score=29.73 Aligned_cols=35 Identities=14% Similarity=0.189 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
|++|+++. +.|.+- ..|++.|.++||+|+.++-..
T Consensus 4 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIVG--GTGYIG--KRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEEc--CCcHHH--HHHHHHHHhCCCcEEEEECCC
Confidence 56677664 344442 467899999999999887653
No 293
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=27.67 E-value=2e+02 Score=26.65 Aligned_cols=37 Identities=16% Similarity=0.178 Sum_probs=25.7
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHh--CCCcEEEEeCC
Q 048562 4 KSSPVEMFFFPYVGGGHQIPMVDIARIFAA--HGAKSTIITSP 44 (464)
Q Consensus 4 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~--rGh~Vt~~~~~ 44 (464)
.+++++||+.. +.|-+ -..|++.|.+ +||+|+.+.-.
T Consensus 7 ~~~~~~vlVTG--atG~I--G~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 7 ELENQTILITG--GAGFV--GSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CCTTCEEEEET--TTSHH--HHHHHHHHHHHCTTSEEEEEECC
T ss_pred hcCCCEEEEEC--CCCHH--HHHHHHHHHhhCCCCeEEEEECC
Confidence 34567777763 33332 3478899999 99999998753
No 294
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=27.57 E-value=1.7e+02 Score=24.05 Aligned_cols=96 Identities=7% Similarity=0.019 Sum_probs=62.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcchhhhhh-hhhhccCCCCCeEEEEecCCCCCCCCCCCCc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKHALSFQK-SINRNQQSGLPITIKTLHLPDDIEIPDTDMS 83 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (464)
..+|++... ..+=.-++.+|+.|.+. ||++. +|.. ....+.. . |..++ .+. ...
T Consensus 11 ~g~V~lsv~--D~dK~~~v~~ak~~~~ll~Gf~l~-AT~g-Ta~~L~e~~-------Gl~v~--~v~----------k~~ 67 (152)
T 1b93_A 11 RKHIALVAH--DHCKQMLMSWVERHQPLLEQHVLY-ATGT-TGNLISRAT-------GMNVN--AML----------SGP 67 (152)
T ss_dssp SCEEEEEEC--GGGHHHHHHHHHHTHHHHTTSEEE-EETT-HHHHHHHHH-------CCCCE--EEC----------CGG
T ss_pred CCEEEEEEe--hhhHHHHHHHHHHHHHHhCCCEEE-EccH-HHHHHHHHh-------CceeE--EEE----------ecC
Confidence 356666654 34456789999999999 99754 5544 3445554 4 33333 321 000
Q ss_pred ccHHHHHhhhHHHHHHhhhhCCCCEEEeCCC--ch--------hhHHHHHHcCCCeEEE
Q 048562 84 ATPRTDTSMLQEPLKSLLVDSRPDCIVHDMF--HH--------WSADVINSMNIPRIVF 132 (464)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~--~~--------~~~~~A~~~giP~v~~ 132 (464)
+.-.+++.+++++.+.|+||.-.- .. ....+|-..+||++..
T Consensus 68 -------eGG~p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 119 (152)
T 1b93_A 68 -------MGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATN 119 (152)
T ss_dssp -------GTHHHHHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESS
T ss_pred -------CCCCchHHHHHHCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeC
Confidence 002567889999999999998654 11 2566888899999975
No 295
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=27.38 E-value=1.1e+02 Score=26.78 Aligned_cols=40 Identities=13% Similarity=0.012 Sum_probs=29.5
Q ss_pred CCCcEEEEEcC-----CCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 5 SSPVEMFFFPY-----VGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 5 ~~~~~vl~~~~-----~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
+.|+||+|+.+ ++. ...=+....+.|.+.|++|++++...
T Consensus 4 ~~m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~ag~~v~~~s~~g 48 (232)
T 1vhq_A 4 ITMKKIGVILSGCGVYDGS-EIHEAVLTLLAISRSGAQAVCFAPDK 48 (232)
T ss_dssp --CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred ccCCeEEEEEccCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 45778999887 433 45556667788999999999998764
No 296
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=27.25 E-value=47 Score=29.08 Aligned_cols=39 Identities=13% Similarity=0.099 Sum_probs=30.9
Q ss_pred CcEEEEEc--CCCccCHHHHHHHHHHHHhC-CCcEEEEeCCc
Q 048562 7 PVEMFFFP--YVGGGHQIPMVDIARIFAAH-GAKSTIITSPK 45 (464)
Q Consensus 7 ~~~vl~~~--~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~ 45 (464)
++|++.+. -++-|-..-...||..|+++ |++|.++-...
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~ 44 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISL 44 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 45554443 45889999999999999999 99999986653
No 297
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=27.13 E-value=1.2e+02 Score=26.96 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
|+|||+.. + |.+- ..|++.|.++||+|+.++-..
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcCh
Confidence 46777774 4 6554 467999999999999987654
No 298
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=27.08 E-value=1.2e+02 Score=28.77 Aligned_cols=39 Identities=8% Similarity=0.097 Sum_probs=33.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcch
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHA 47 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~ 47 (464)
-+++...++.|-..-++.++..++++|..|.|+......
T Consensus 65 ii~I~G~pGsGKTtLal~la~~~~~~g~~vlyid~E~s~ 103 (356)
T 1u94_A 65 IVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHAL 103 (356)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 466777779999999999999999999999999886543
No 299
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=27.05 E-value=2.9e+02 Score=23.38 Aligned_cols=142 Identities=12% Similarity=0.113 Sum_probs=79.8
Q ss_pred cEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccHH
Q 048562 253 SVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQL 332 (464)
Q Consensus 253 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq~ 332 (464)
+.|-|-+||.. +....++....|+.++..+-..+..- ++ +|+.+.+ |+.+
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR--------~p~~l~~-------------~~~~- 71 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA------HR--------TPDRLAD-------------YART- 71 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TT--------CHHHHHH-------------HHHH-
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cC--------CHHHHHH-------------HHHH-
Confidence 45777788876 56677888888888888766555443 21 4432211 1110
Q ss_pred HHhcccCceeeccccch----hhHHHHHHcCCceeecccccc---cchhHHHHHhh--hcceEEe---ccccccCCCCCC
Q 048562 333 LILEHTAVGGFMTHCGW----NSTLESVSAGVPMVTWPITAE---QFSNEKLISDV--LKIGVKV---GSVNWVSWSTEP 400 (464)
Q Consensus 333 ~lL~~~~~~~~ItHGG~----~s~~Eal~~GvP~v~~P~~~D---Q~~na~~v~~~--~G~G~~l---~~~~~~~~~~~~ 400 (464)
...-.+++||.=+|. .++.-++ .-+|+|.+|.... -.+-..-++ + .|+.+.. +..
T Consensus 72 --a~~~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~I~~a--------- 138 (182)
T 1u11_A 72 --AAERGLNVIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIV-QMPGGVPVGTLAIGAS--------- 138 (182)
T ss_dssp --TTTTTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-CCCTTSCCEECCSSHH---------
T ss_pred --HHhCCCcEEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCceEEEecCCc---------
Confidence 001112337766653 4555554 4799999998542 122222343 5 5555221 100
Q ss_pred CCccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhc
Q 048562 401 SAAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVEE 443 (464)
Q Consensus 401 ~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~ 443 (464)
+..++.-+...|- -+.|+ .++++.+.+++..++.+.+
T Consensus 139 -~~~nAallAaqIl-a~~d~----~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 139 -GAKNAALLAASIL-ALYNP----ALAARLETWRALQTASVPN 175 (182)
T ss_dssp -HHHHHHHHHHHHH-GGGCH----HHHHHHHHHHHHHHHHSCS
T ss_pred -cchHHHHHHHHHH-ccCCH----HHHHHHHHHHHHHHHHHHH
Confidence 1355666665555 34555 8999999999988865544
No 300
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=27.05 E-value=74 Score=28.84 Aligned_cols=38 Identities=3% Similarity=-0.046 Sum_probs=27.2
Q ss_pred CcEEEEEcCCC-ccCHH---HHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVG-GGHQI---PMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~-~GH~~---p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
++||+++..+. .-|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 46788887642 22322 3467999999999999988765
No 301
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=27.04 E-value=3.3e+02 Score=24.10 Aligned_cols=33 Identities=21% Similarity=0.152 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+++++.++.| --..+|+.|+++|++|.+....
T Consensus 32 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~~ 64 (271)
T 3v2g_A 32 KTAFVTGGSRG---IGAAIAKRLALEGAAVALTYVN 64 (271)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56666655432 3468899999999999887543
No 302
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=27.03 E-value=1.9e+02 Score=29.07 Aligned_cols=91 Identities=14% Similarity=0.232 Sum_probs=54.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHH-HhCCCcEEEEeCCcch--hhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIF-AAHGAKSTIITSPKHA--LSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMS 83 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L-~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (464)
..|++++. .-.-.+.+++.| .+.|-+|..+++.... +.++...... +..+.+ .
T Consensus 280 GKrv~i~g-----d~~~~~~la~~L~~ElGm~vv~~gt~~~~~~~~~~~~~~~~---~~~v~i----------------~ 335 (525)
T 3aek_B 280 GKRVFIFG-----DGTHVIAAARIAAKEVGFEVVGMGCYNREMARPLRTAAAEY---GLEALI----------------T 335 (525)
T ss_dssp TCEEEECS-----SHHHHHHHHHHHHHTTCCEEEEEEESCGGGHHHHHHHHHHT---TCCCEE----------------C
T ss_pred CCEEEEEc-----CchHHHHHHHHHHHHcCCeeEEEecCchhHHHHHHHHHHhc---CCcEEE----------------e
Confidence 35677653 235578899999 7889999876654321 1222111110 111110 0
Q ss_pred ccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEE
Q 048562 84 ATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVF 132 (464)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~ 132 (464)
.. ...+.+++++.+||++|.+. ....+|+++|||++.+
T Consensus 336 ~D--------~~el~~~i~~~~pDL~ig~~---~~~~~a~~~giP~~~i 373 (525)
T 3aek_B 336 DD--------YLEVEKAIEAAAPELILGTQ---MERNIAKKLGLPCAVI 373 (525)
T ss_dssp SC--------HHHHHHHHHHHCCSEEEECH---HHHHHHHHHTCCEEEC
T ss_pred CC--------HHHHHHHHhhcCCCEEEecc---hhHHHHHHcCCCEEEe
Confidence 01 13456777788999999873 3566789999999985
No 303
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=26.94 E-value=79 Score=24.42 Aligned_cols=39 Identities=15% Similarity=0.220 Sum_probs=0.0
Q ss_pred HHHHHhhhhCCCCEEEeCCCch--hhHHHHHHc-----CCCeEEEec
Q 048562 95 EPLKSLLVDSRPDCIVHDMFHH--WSADVINSM-----NIPRIVFNG 134 (464)
Q Consensus 95 ~~l~~~l~~~~pD~Vi~D~~~~--~~~~~A~~~-----giP~v~~~~ 134 (464)
....+.+.+.+||+||.|. .. .+..+.+.+ ++|+|.++.
T Consensus 38 ~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~ 83 (142)
T 2qxy_A 38 QEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSA 83 (142)
T ss_dssp HHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEEC
No 304
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=26.88 E-value=95 Score=25.87 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
++|+++. +.|-+ -..|++.|.++||+|+.++-.
T Consensus 4 ~~ilVtG--atG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFG--ATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEES--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEc--CCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 5666653 34433 467899999999999988764
No 305
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=26.85 E-value=1.1e+02 Score=26.48 Aligned_cols=46 Identities=13% Similarity=-0.007 Sum_probs=32.6
Q ss_pred cccccCcCCCCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEE
Q 048562 242 ILSFLDSKETNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWV 287 (464)
Q Consensus 242 l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~ 287 (464)
+.+|+.....+.++||..+|......+.+..+.++|+++|..+.+.
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 4456544334669999988765444567888999999999876543
No 306
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=26.68 E-value=72 Score=24.45 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=24.0
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHHc-----CCCeEEEeccc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINSM-----NIPRIVFNGNC 136 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 136 (464)
+.+++.+||+||.|...+ .+..+++.+ ++|.|.++...
T Consensus 43 ~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (133)
T 3b2n_A 43 KLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFK 87 (133)
T ss_dssp HHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCC
Confidence 445566899999997654 344444332 57777776543
No 307
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=26.64 E-value=53 Score=31.36 Aligned_cols=38 Identities=5% Similarity=-0.025 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCcEEEEeC
Q 048562 6 SPVEMFFFPYVGGG-H---QIPMVDIARIF-AAHGAKSTIITS 43 (464)
Q Consensus 6 ~~~~vl~~~~~~~G-H---~~p~l~la~~L-~~rGh~Vt~~~~ 43 (464)
+++||+++..+-.+ | +.....++++| .++||+|+.+..
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 46789888765333 3 23468889999 999999998854
No 308
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=26.58 E-value=1.3e+02 Score=26.21 Aligned_cols=91 Identities=8% Similarity=-0.086 Sum_probs=0.0
Q ss_pred CcEEEEecCCC-CCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCccc
Q 048562 252 NSVLYISFGSL-ARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAP 330 (464)
Q Consensus 252 ~~~V~vs~GS~-~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vp 330 (464)
++..+|+.|.. . .+....++..+.+-+++=+.... +-+....... -.++.++...+
T Consensus 40 ~g~~lV~GGg~~G-----lM~aa~~gA~~~GG~~iGv~p~~----------------l~~~e~~~~~--~~~~~~~~~~~ 96 (216)
T 1ydh_A 40 RKIDLVYGGGSVG-----LMGLISRRVYEGGLHVLGIIPKA----------------LMPIEISGET--VGDVRVVADMH 96 (216)
T ss_dssp TTCEEEECCCSSH-----HHHHHHHHHHHTTCCEEEEEEGG----------------GHHHHCCSSC--CSEEEEESSHH
T ss_pred CCCEEEECCCccc-----HhHHHHHHHHHcCCcEEEEechh----------------cCccccccCC--CCcccccCCHH
Q ss_pred -HHHHhcccCceeeccccchhhHHHHH---------HcCCceeec
Q 048562 331 -QLLILEHTAVGGFMTHCGWNSTLESV---------SAGVPMVTW 365 (464)
Q Consensus 331 -q~~lL~~~~~~~~ItHGG~~s~~Eal---------~~GvP~v~~ 365 (464)
...++..-+...++--||.||+-|.. .+++|++.+
T Consensus 97 ~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll 141 (216)
T 1ydh_A 97 ERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLL 141 (216)
T ss_dssp HHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred HHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEe
No 309
>2hh6_A BH3980 protein; 10176605, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI, unknown; 2.04A {Bacillus halodurans} SCOP: a.69.4.1
Probab=26.52 E-value=72 Score=24.82 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=25.0
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 048562 409 VEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVE 442 (464)
Q Consensus 409 l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~ 442 (464)
+.+.|..++.+..+.+.|..|+++|-+..+.+++
T Consensus 4 ~~~~i~~~~~~Kke~k~~~aR~k~LP~dY~~ay~ 37 (113)
T 2hh6_A 4 FIEKMIGSLNDKREWKAMEARAKALPKEYHHAYK 37 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHCCHHHHHHHH
Confidence 4567788887777778888888887776665544
No 310
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=26.43 E-value=40 Score=32.01 Aligned_cols=30 Identities=27% Similarity=0.233 Sum_probs=23.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEe
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIIT 42 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~ 42 (464)
+||+++-.+-.| +.+|..|+++||+|+++=
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 688888665333 778899999999999983
No 311
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=26.40 E-value=77 Score=23.89 Aligned_cols=38 Identities=8% Similarity=0.057 Sum_probs=23.3
Q ss_pred HHHhhhhCCCCEEEeCCCch--hhHHHHHH-------cCCCeEEEec
Q 048562 97 LKSLLVDSRPDCIVHDMFHH--WSADVINS-------MNIPRIVFNG 134 (464)
Q Consensus 97 l~~~l~~~~pD~Vi~D~~~~--~~~~~A~~-------~giP~v~~~~ 134 (464)
..+.+++.+||+||.|.... .+..+++. .++|.|.++.
T Consensus 39 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 85 (127)
T 3i42_A 39 ALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSG 85 (127)
T ss_dssp HHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEEC
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEEC
Confidence 33555668899999997653 34444332 3467776643
No 312
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=26.34 E-value=97 Score=23.06 Aligned_cols=38 Identities=11% Similarity=0.149 Sum_probs=24.3
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHH----cCCCeEEEeccc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINS----MNIPRIVFNGNC 136 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~----~giP~v~~~~~~ 136 (464)
+.+.+.+||+||.|...+ .+..+++. -++|.+.++...
T Consensus 41 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 84 (123)
T 1xhf_A 41 QILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRD 84 (123)
T ss_dssp HHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCC
T ss_pred HHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCC
Confidence 455567899999997654 24444433 367777776543
No 313
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=26.34 E-value=90 Score=23.04 Aligned_cols=38 Identities=16% Similarity=0.330 Sum_probs=24.2
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHH----HcCCCeEEEeccc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVIN----SMNIPRIVFNGNC 136 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~----~~giP~v~~~~~~ 136 (464)
+.+.+.+||+||.|...+ .+..+++ ...+|.+.++...
T Consensus 39 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 39 EQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp HHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred HHHHhCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 344556899999997653 2443333 3468888876543
No 314
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=26.24 E-value=3.3e+02 Score=23.93 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=21.9
Q ss_pred CCCEEEeCCC-ch-hhHHHHHHcCCCeEEEec
Q 048562 105 RPDCIVHDMF-HH-WSADVINSMNIPRIVFNG 134 (464)
Q Consensus 105 ~pD~Vi~D~~-~~-~~~~~A~~~giP~v~~~~ 134 (464)
.||+||+-.- .- .+..=|..+|||.|.+.-
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivD 188 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLID 188 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCC
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEec
Confidence 5998886443 32 566678889999999853
No 315
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=26.22 E-value=86 Score=24.19 Aligned_cols=38 Identities=8% Similarity=0.068 Sum_probs=24.7
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHHc----CCCeEEEeccc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINSM----NIPRIVFNGNC 136 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~~----giP~v~~~~~~ 136 (464)
+.+.+.+||+||.|...+ .+..+++.+ .+|.|.++...
T Consensus 42 ~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 42 GKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp HHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 455667899999997654 344444432 67888776543
No 316
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=26.13 E-value=1.1e+02 Score=22.49 Aligned_cols=39 Identities=18% Similarity=0.247 Sum_probs=24.9
Q ss_pred HHhhhhCCCCEEEeCCCch--hhHHHHHH-----cCCCeEEEeccc
Q 048562 98 KSLLVDSRPDCIVHDMFHH--WSADVINS-----MNIPRIVFNGNC 136 (464)
Q Consensus 98 ~~~l~~~~pD~Vi~D~~~~--~~~~~A~~-----~giP~v~~~~~~ 136 (464)
.+.+.+.+||+||.|...+ .+..+.+. ..+|.|.++...
T Consensus 37 ~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (121)
T 2pl1_A 37 DYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARE 82 (121)
T ss_dssp HHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCC
T ss_pred HHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCC
Confidence 3455667899999997654 24433332 257888876543
No 317
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=25.97 E-value=42 Score=33.01 Aligned_cols=36 Identities=8% Similarity=-0.059 Sum_probs=25.3
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 3 SKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 3 ~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
.+.+++||.|+..|..| +.+|..|++ ||+|+.+-..
T Consensus 32 r~~~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 32 RGSEFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp ---CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECSC
T ss_pred cccCCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEecC
Confidence 34567899999776555 356778887 9999988653
No 318
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=25.88 E-value=53 Score=29.18 Aligned_cols=36 Identities=6% Similarity=0.057 Sum_probs=24.5
Q ss_pred HhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEec
Q 048562 99 SLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFNG 134 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~~ 134 (464)
+.+.+.+||+||...... ......+..|||++.+..
T Consensus 54 E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 54 EAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp HHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred HHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 445568999999865432 234455667999998754
No 319
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=25.86 E-value=71 Score=26.44 Aligned_cols=38 Identities=13% Similarity=0.130 Sum_probs=25.3
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHH-----cCCCeEEEeccc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINS-----MNIPRIVFNGNC 136 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~-----~giP~v~~~~~~ 136 (464)
+.+++.+||+||.|...+ .+..+++. -++|.|.++...
T Consensus 45 ~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 45 KLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp HHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 556678899999997654 34444443 257888776543
No 320
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=25.79 E-value=83 Score=29.11 Aligned_cols=34 Identities=15% Similarity=0.096 Sum_probs=23.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
.|.++++..+. -+ -..||+.|+++|++|.++.-.
T Consensus 8 ~k~vlVTGas~-gI--G~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 8 GRTAFVTGGAN-GV--GIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp TCEEEEETTTS-TH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEcCCch-HH--HHHHHHHHHHCCCEEEEEECC
Confidence 34555555443 33 457899999999998877654
No 321
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=25.79 E-value=45 Score=29.68 Aligned_cols=26 Identities=23% Similarity=0.293 Sum_probs=21.1
Q ss_pred ccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 18 GGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 18 ~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
.|. --..||++|+++|++|++++.+.
T Consensus 28 SG~--mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGH--LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCH--HHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCH--HHHHHHHHHHHCCCEEEEEeCCc
Confidence 453 34678999999999999998864
No 322
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=25.76 E-value=78 Score=25.01 Aligned_cols=39 Identities=15% Similarity=0.228 Sum_probs=24.8
Q ss_pred HHhhhhCCCCEEEeCCCch--hhHHHHHH-----cCCCeEEEeccc
Q 048562 98 KSLLVDSRPDCIVHDMFHH--WSADVINS-----MNIPRIVFNGNC 136 (464)
Q Consensus 98 ~~~l~~~~pD~Vi~D~~~~--~~~~~A~~-----~giP~v~~~~~~ 136 (464)
.+.+++.+||+||.|.... .+..+.+. -++|.|.++...
T Consensus 51 ~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 51 LQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 3455677899999997654 24444433 257877775543
No 323
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=25.75 E-value=46 Score=31.14 Aligned_cols=33 Identities=12% Similarity=0.221 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
++||.|+-.|..| ..+|..|.+.||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 5789999877666 47899999999999998764
No 324
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=25.75 E-value=2.9e+02 Score=24.30 Aligned_cols=35 Identities=20% Similarity=0.166 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
+.|+++++.++.| --..+|+.|+++|++|.+....
T Consensus 24 ~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 24 AKRVAFVTGGMGG---LGAAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp CCCEEEETTTTSH---HHHHHHHHHHTTTCEEEEEECS
T ss_pred cCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcCC
Confidence 3466677665432 3467899999999999887644
No 325
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=25.74 E-value=1.4e+02 Score=22.94 Aligned_cols=39 Identities=10% Similarity=0.053 Sum_probs=30.7
Q ss_pred CCCCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEe
Q 048562 4 KSSPVEMFFFPYVGGGHQIP-MVDIARIFAAHGAKSTIIT 42 (464)
Q Consensus 4 ~~~~~~vl~~~~~~~GH~~p-~l~la~~L~~rGh~Vt~~~ 42 (464)
..+|.||++++..|.|.-.- .-.|-+.+.+.|.++.+-.
T Consensus 18 ~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 18 QGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 35678999999999999774 6777788888999875544
No 326
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=25.72 E-value=59 Score=29.49 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=24.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEe
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIIT 42 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~ 42 (464)
.|+||.|+-.|..|. .+|+.|.+.||+|+++.
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp --CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 357899997776664 47888999999998765
No 327
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=25.66 E-value=22 Score=32.79 Aligned_cols=35 Identities=17% Similarity=-0.062 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
++.+|+++-.+..| +..|..|+++|++|+++-...
T Consensus 6 ~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 6 KVYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred ccceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 45688888776444 678889999999999997654
No 328
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=25.64 E-value=35 Score=31.73 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCC-cEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGA-KSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh-~Vt~~~~~ 44 (464)
++|+||.|+-.|..| ..+|+.|++.|| +|+++...
T Consensus 22 ~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECSS
T ss_pred CCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcCC
Confidence 357899999776555 478999999999 99988664
No 329
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=25.52 E-value=95 Score=26.99 Aligned_cols=40 Identities=18% Similarity=0.073 Sum_probs=25.6
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+..++.. .++++. +.|- --..+++.|+++||+|+++...
T Consensus 1 m~~~~~~~-~vlVtG-asgg--iG~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 1 MEIKLQGK-VSLVTG-STRG--IGRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp CCCCCTTC-EEEETT-CSSH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CccccCCC-EEEEEC-CCch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 55444444 444444 3332 3456899999999999988654
No 330
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=25.51 E-value=1.2e+02 Score=26.90 Aligned_cols=40 Identities=23% Similarity=0.135 Sum_probs=25.6
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|++.++.++ ++++.++ |- --..+++.|+++|++|.++.-.
T Consensus 1 m~~~l~~k~-vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 1 MDMGISGKV-AVITGSS-SG--IGLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp CCCCCTTCE-EEEESCS-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCCCE-EEEECCC-ch--HHHHHHHHHHHCCCEEEEEcCC
Confidence 554444444 4444433 32 3467899999999999887654
No 331
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=25.51 E-value=74 Score=23.88 Aligned_cols=38 Identities=21% Similarity=0.348 Sum_probs=23.8
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHH-----cCCCeEEEeccc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINS-----MNIPRIVFNGNC 136 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~-----~giP~v~~~~~~ 136 (464)
+.+.+.+||+||.|...+ .+..+++. -++|.|.++...
T Consensus 41 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 41 DIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp HHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 344456899999997654 24444433 257888776543
No 332
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=25.46 E-value=68 Score=29.21 Aligned_cols=33 Identities=12% Similarity=0.115 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
+++||.|+-.+..|. .+++.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 467899998776664 468889999999987654
No 333
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=25.38 E-value=45 Score=30.65 Aligned_cols=33 Identities=9% Similarity=0.066 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
++||.|+-.+..|. .+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 46899998877664 6899999999999988653
No 334
>4gxh_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 2.70A {Xenorhabdus bovienii}
Probab=25.33 E-value=43 Score=29.43 Aligned_cols=27 Identities=11% Similarity=0.144 Sum_probs=19.5
Q ss_pred CcEEEEEcCC-CccC-HHHHHHHHHHHHh
Q 048562 7 PVEMFFFPYV-GGGH-QIPMVDIARIFAA 33 (464)
Q Consensus 7 ~~~vl~~~~~-~~GH-~~p~l~la~~L~~ 33 (464)
|++||+..++ ..|| +||...++++|..
T Consensus 2 MktVLvTGF~PF~~~~~NPS~~~v~~L~~ 30 (216)
T 4gxh_A 2 MKTILVTAFDPFGGEAINPSWEAIKPLQG 30 (216)
T ss_dssp -CEEEEEEECCCTTSSSCHHHHHHGGGTT
T ss_pred CCEEEEeeccCCCCCCCChhHHHHHhhhc
Confidence 6789888776 3333 6999999998854
No 335
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=25.31 E-value=51 Score=31.04 Aligned_cols=35 Identities=20% Similarity=0.401 Sum_probs=23.9
Q ss_pred HhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEe
Q 048562 99 SLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFN 133 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~ 133 (464)
|.|.+.+||+||...... ....+.+.+|+|++.+.
T Consensus 90 E~Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 90 ESLITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp HHHHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred HHHhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 344457899999875432 23345677899999873
No 336
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=25.29 E-value=62 Score=28.65 Aligned_cols=35 Identities=9% Similarity=0.141 Sum_probs=25.3
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHHcCCCeEEEe
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINSMNIPRIVFN 133 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~~giP~v~~~ 133 (464)
+.|.+.+||+||...... ....-.+..|+|++.+.
T Consensus 53 E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 53 EGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp HHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 555678999999987653 23445567899999884
No 337
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=25.28 E-value=55 Score=28.26 Aligned_cols=34 Identities=24% Similarity=0.218 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
.+++|.|+..+..| ..+|..|.++||+|+++...
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 46789988765555 56789999999999988643
No 338
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=25.24 E-value=2.2e+02 Score=25.40 Aligned_cols=33 Identities=18% Similarity=0.070 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+++++.++.| --..+|+.|+++|++|.+..-.
T Consensus 34 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 66 (275)
T 4imr_A 34 RTALVTGSSRG---IGAAIAEGLAGAGAHVILHGVK 66 (275)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEcCC
Confidence 56777665442 3467899999999999887654
No 339
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=25.16 E-value=67 Score=28.61 Aligned_cols=39 Identities=13% Similarity=0.194 Sum_probs=30.2
Q ss_pred CCcEEEEEc--CCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 6 SPVEMFFFP--YVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 6 ~~~~vl~~~--~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
++++++.+. -+|-|=..-.+.||..|+ +|++|.++-...
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~ 65 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDT 65 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECT
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 456666554 348888899999999999 999999986543
No 340
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=25.14 E-value=72 Score=26.46 Aligned_cols=29 Identities=28% Similarity=0.211 Sum_probs=23.7
Q ss_pred EEEEecCCCCCCCHHhHHHHHHHHhhCCC
Q 048562 254 VLYISFGSLARLSPEQLLEIAYGLEASNH 282 (464)
Q Consensus 254 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~ 282 (464)
.+|+++||....+.+.+...+.+|.+.+.
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~ 30 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPE 30 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCCC
Confidence 68999999997777778888888887643
No 341
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=25.10 E-value=57 Score=30.20 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=24.5
Q ss_pred HhhhhCCCCEEEeCCCch-hhHHHHHHcCCCeEEEe
Q 048562 99 SLLVDSRPDCIVHDMFHH-WSADVINSMNIPRIVFN 133 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~-~~~~~A~~~giP~v~~~ 133 (464)
+.|.+.+||+||...... ....-.+..|||++.+.
T Consensus 78 E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~ 113 (326)
T 3psh_A 78 ESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAIS 113 (326)
T ss_dssp HHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEEC
T ss_pred HHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEe
Confidence 445568999999875432 33445567899999984
No 342
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=25.06 E-value=39 Score=33.81 Aligned_cols=36 Identities=8% Similarity=0.119 Sum_probs=28.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcc
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKH 46 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 46 (464)
.+.||+++-.+..| +.+|+.|.++|++||++....+
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCCC
Confidence 46799999776444 5789999999999999987543
No 343
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=24.99 E-value=84 Score=26.84 Aligned_cols=39 Identities=23% Similarity=0.340 Sum_probs=26.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHH-HHHHHHhCCCcEEEEeC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVD-IARIFAAHGAKSTIITS 43 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~-la~~L~~rGh~Vt~~~~ 43 (464)
++|+||+++-....|+..-+.. +++.|.+.|++|.++--
T Consensus 4 ~~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 4 TAPVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp -CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 4578888887766777665444 46666778988877654
No 344
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=24.96 E-value=68 Score=28.71 Aligned_cols=40 Identities=20% Similarity=0.257 Sum_probs=27.0
Q ss_pred hhHHHHHHhhhhCCCCEEEeCCCch-------hhHHHHHHcCCCeEEEe
Q 048562 92 MLQEPLKSLLVDSRPDCIVHDMFHH-------WSADVINSMNIPRIVFN 133 (464)
Q Consensus 92 ~~~~~l~~~l~~~~pD~Vi~D~~~~-------~~~~~A~~~giP~v~~~ 133 (464)
.+.++++++ +.+||+|++|.... .++.+.-.+|+|+|.+.
T Consensus 98 ~ll~al~~L--~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 98 LIIEAAKKL--ETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIA 144 (246)
T ss_dssp HHHHHHHHC--SSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHhc--CCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeee
Confidence 344444333 25799999998642 35556667899999983
No 345
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=24.95 E-value=3.9e+02 Score=24.41 Aligned_cols=111 Identities=9% Similarity=0.050 Sum_probs=59.9
Q ss_pred cEEEEecCCCCCCCHHhHHHHHHHHhhC-CCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccH
Q 048562 253 SVLYISFGSLARLSPEQLLEIAYGLEAS-NHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQ 331 (464)
Q Consensus 253 ~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq 331 (464)
.+.+|..|.+. ..++.++.+. +..++.++... .+ -...+.++. ++ ..-+-..
T Consensus 7 ~igiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~----------~~----~~~~~~~~~-----~~-~~~~~~~ 59 (330)
T 3e9m_A 7 RYGIMSTAQIV-------PRFVAGLRESAQAEVRGIASRR----------LE----NAQKMAKEL-----AI-PVAYGSY 59 (330)
T ss_dssp EEEECSCCTTH-------HHHHHHHHHSSSEEEEEEBCSS----------SH----HHHHHHHHT-----TC-CCCBSSH
T ss_pred EEEEECchHHH-------HHHHHHHHhCCCcEEEEEEeCC----------HH----HHHHHHHHc-----CC-CceeCCH
Confidence 37778888775 2356666664 44555454433 11 011222221 11 1124466
Q ss_pred HHHhcccCceeeccccc----hhhHHHHHHcCCceee-ccccc--ccchhHHHHHhhhcceEEecc
Q 048562 332 LLILEHTAVGGFMTHCG----WNSTLESVSAGVPMVT-WPITA--EQFSNEKLISDVLKIGVKVGS 390 (464)
Q Consensus 332 ~~lL~~~~~~~~ItHGG----~~s~~Eal~~GvP~v~-~P~~~--DQ~~na~~v~~~~G~G~~l~~ 390 (464)
.++|..+++.+++---- ..-+.+++.+|+++++ -|+.. ++-.....++++.|+-..+..
T Consensus 60 ~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~ 125 (330)
T 3e9m_A 60 EELCKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQ 125 (330)
T ss_dssp HHHHHCTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECC
T ss_pred HHHhcCCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 77887555444443222 2347788999999987 56543 444444443357777666654
No 346
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=24.94 E-value=3.1e+02 Score=22.99 Aligned_cols=148 Identities=13% Similarity=0.194 Sum_probs=77.7
Q ss_pred CCcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCccc
Q 048562 251 TNSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAP 330 (464)
Q Consensus 251 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vp 330 (464)
+.|.|-|-+||.. +....++....++.++..+-..+-.- ++ +|+.+.+ |+-
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR--------~p~~l~~-------------~~~ 61 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA------HR--------MPDEMFD-------------YAE 61 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TT--------SHHHHHH-------------HHH
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc------cc--------CHHHHHH-------------HHH
Confidence 4668888899987 56678888888888888766555443 21 4433221 111
Q ss_pred HHHHhcccCceeeccccc----hhhHHHHHHcCCceeeccccccc---chhHHHHHhhhcceEEeccccccCCCCCCCCc
Q 048562 331 QLLILEHTAVGGFMTHCG----WNSTLESVSAGVPMVTWPITAEQ---FSNEKLISDVLKIGVKVGSVNWVSWSTEPSAA 403 (464)
Q Consensus 331 q~~lL~~~~~~~~ItHGG----~~s~~Eal~~GvP~v~~P~~~DQ---~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~ 403 (464)
.. ..-.++++|.=.| +.++.-+ ..-+|+|.+|....- .+-..-++ ..=-|+-+-.- -.+ .++.
T Consensus 62 ~a---~~~g~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSiv-qMP~Gvpvatv---~i~--~~~a 131 (173)
T 4grd_A 62 KA---RERGLRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIV-QMPKGVPVATF---AIG--EAGA 131 (173)
T ss_dssp HH---TTTTCSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHH-CCCTTSCCEEC---CSS--HHHH
T ss_pred HH---HhcCCeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHH-hCCCCCCceEE---ecC--Ccch
Confidence 10 1112233665555 3355555 447999999975432 22222332 32223222111 000 0012
Q ss_pred cChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 048562 404 VGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNAVE 442 (464)
Q Consensus 404 ~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~ 442 (464)
.++.-++..|-. +.|+ .+++|.++++++.++.+.
T Consensus 132 ~NAallA~~ILa-~~d~----~l~~kl~~~r~~~~~~v~ 165 (173)
T 4grd_A 132 ANAALFAVSILS-GNSV----DYANRLAAFRVRQNEAAH 165 (173)
T ss_dssp HHHHHHHHHHHT-TSCH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCH----HHHHHHHHHHHHHHHHHH
Confidence 334444444432 3455 789999888888775443
No 347
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=24.86 E-value=3.6e+02 Score=23.85 Aligned_cols=33 Identities=18% Similarity=0.097 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
-|+++++.++.| --..+|+.|+++|++|.++.-
T Consensus 11 ~k~~lVTGas~g---IG~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 11 GKVAFVTGAARG---QGRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEec
Confidence 356666665543 356889999999999988754
No 348
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=24.84 E-value=1.6e+02 Score=26.14 Aligned_cols=33 Identities=9% Similarity=-0.088 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
-|+++++.++.| --..+|+.|+++|++|.++..
T Consensus 11 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 11 NKVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 356667665544 356889999999999998753
No 349
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=24.83 E-value=73 Score=26.40 Aligned_cols=29 Identities=28% Similarity=0.211 Sum_probs=23.0
Q ss_pred EEEEecCCCCCCCHHhHHHHHHHHhhCCC
Q 048562 254 VLYISFGSLARLSPEQLLEIAYGLEASNH 282 (464)
Q Consensus 254 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~ 282 (464)
+.|+++||....+.+.++..+.++.+...
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~~ 30 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPE 30 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCCC
Confidence 67999999987667777878888877544
No 350
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=24.75 E-value=1.5e+02 Score=24.70 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=30.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
++++||+++.+++.. ..-+....+.|.+.|++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 567899999876554 3456667788889999999998753
No 351
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=24.68 E-value=62 Score=29.30 Aligned_cols=41 Identities=17% Similarity=0.172 Sum_probs=32.5
Q ss_pred CCcEEEEEcCC---CccCHHHHHHHHHHHHhCCCcEEEEeCCcc
Q 048562 6 SPVEMFFFPYV---GGGHQIPMVDIARIFAAHGAKSTIITSPKH 46 (464)
Q Consensus 6 ~~~~vl~~~~~---~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 46 (464)
.++|.+|++.+ +.|-=.-.-.|+..|.+||++|+..=-.++
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPY 64 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECB
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCc
Confidence 45688888865 666667889999999999999998654444
No 352
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=24.66 E-value=1.1e+02 Score=26.40 Aligned_cols=40 Identities=23% Similarity=0.199 Sum_probs=25.0
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|...++.+++++.- +.|.+ -..+++.|+++||+|.++...
T Consensus 1 m~~~~~~~~vlVTG--asggi--G~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 1 MKLNFSGLRALVTG--AGKGI--GRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp --CCCTTCEEEEES--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CccCCCCCEEEEeC--CCchH--HHHHHHHHHHCCCEEEEEeCC
Confidence 44445555555543 33433 457899999999999887654
No 353
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=24.61 E-value=2.8e+02 Score=24.66 Aligned_cols=33 Identities=12% Similarity=0.051 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+++++.++. .--..+|+.|+++|++|.++...
T Consensus 33 k~~lVTGas~---GIG~aia~~la~~G~~V~~~~r~ 65 (276)
T 3r1i_A 33 KRALITGAST---GIGKKVALAYAEAGAQVAVAARH 65 (276)
T ss_dssp CEEEEESTTS---HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCC---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4555655443 23467899999999999887654
No 354
>4dhx_B Enhancer of yellow 2 transcription factor homolog, 80 kDa MCM3-associated protein; mRNA export, transport protein-DNA binding protein complex; 2.10A {Homo sapiens}
Probab=24.53 E-value=62 Score=24.64 Aligned_cols=55 Identities=15% Similarity=0.300 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHhcCChHHHHHHHHHH----------HHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q 048562 406 RDKVEVAVKRLMGTGEEAAEMRRRAG----------ELGEKAKNAVEEGGSSFIDAEALLQELKS 460 (464)
Q Consensus 406 ~~~l~~ai~~il~~~~~~~~~~~~a~----------~l~~~~~~~~~~gg~~~~~~~~l~~~~~~ 460 (464)
..++.+.|+.-|-.+++.+.+++-.+ ++++.+++..++.|....++++|++++..
T Consensus 9 e~~lka~I~~~LveSGe~erL~~lL~~rL~EcGW~Devr~~~r~~i~~~g~~~vt~~~L~~~I~P 73 (101)
T 4dhx_B 9 DAQMRAAINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITP 73 (101)
T ss_dssp CHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHcCCCCCCHHHHHHHHhH
Confidence 35677777755543433333322222 24444554445555444567777777764
No 355
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=24.52 E-value=94 Score=29.42 Aligned_cols=34 Identities=3% Similarity=-0.239 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
|+||+++..+ .....++++|.+.||+|.++.+..
T Consensus 1 M~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 1 MKKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp CCEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4678888754 345678889999999999887753
No 356
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=24.49 E-value=91 Score=25.86 Aligned_cols=29 Identities=21% Similarity=0.242 Sum_probs=24.5
Q ss_pred EEEEecCCCCCCCHHhHHHHHHHHhhCCC
Q 048562 254 VLYISFGSLARLSPEQLLEIAYGLEASNH 282 (464)
Q Consensus 254 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~ 282 (464)
.+|+++||....+.+.+...+.++++.+.
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~ 31 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLPR 31 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCTT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCCC
Confidence 58999999998888888888888888654
No 357
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=24.44 E-value=1.1e+02 Score=23.38 Aligned_cols=38 Identities=5% Similarity=0.117 Sum_probs=24.0
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHH-----cCCCeEEEeccc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINS-----MNIPRIVFNGNC 136 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~-----~giP~v~~~~~~ 136 (464)
+.+.+.+||+||.|...+ .+..+++. -++|.|.++...
T Consensus 41 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (132)
T 3crn_A 41 AKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYA 85 (132)
T ss_dssp HHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCC
T ss_pred HHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccc
Confidence 445567899999997654 34433332 257887776543
No 358
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=24.40 E-value=76 Score=29.84 Aligned_cols=34 Identities=6% Similarity=-0.257 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
|.+|+++..+ .....++++|.+.||+|.++.+..
T Consensus 1 M~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 34 (365)
T 2z04_A 1 MLTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDKE 34 (365)
T ss_dssp -CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSSS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4678888543 456788999999999999887653
No 359
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=24.38 E-value=81 Score=22.60 Aligned_cols=49 Identities=14% Similarity=0.152 Sum_probs=31.3
Q ss_pred cCCceeecccccccchhH-HHH-HhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhc
Q 048562 358 AGVPMVTWPITAEQFSNE-KLI-SDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMG 418 (464)
Q Consensus 358 ~GvP~v~~P~~~DQ~~na-~~v-~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~ 418 (464)
.|+|++++--.+.|-+.- ..- +..-|+..-+-. ..++++|...+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydvlk------------stdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLK------------STDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEE------------CCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhhhc------------cCCHHHHHHHHHHHHH
Confidence 588988887766654432 222 034455544433 5789999999998874
No 360
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=24.27 E-value=2.8e+02 Score=25.76 Aligned_cols=111 Identities=14% Similarity=0.113 Sum_probs=62.1
Q ss_pred cEEEEecCCCCCCCHHhHHHHHHHHhhC-CCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccH
Q 048562 253 SVLYISFGSLARLSPEQLLEIAYGLEAS-NHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQ 331 (464)
Q Consensus 253 ~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq 331 (464)
.+.+|..|.+. ...+.++.+. +..++.++... .+ -.+.+.++. ++ ..+-..
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~----------~~----~~~~~~~~~-----g~--~~~~~~ 58 (354)
T 3db2_A 7 GVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRT----------ED----KREKFGKRY-----NC--AGDATM 58 (354)
T ss_dssp EEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSS----------HH----HHHHHHHHH-----TC--CCCSSH
T ss_pred eEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCC----------HH----HHHHHHHHc-----CC--CCcCCH
Confidence 37778887765 3456777766 55666555443 11 011222221 22 225567
Q ss_pred HHHhcccCceeecc--ccc--hhhHHHHHHcCCceee-ccccc--ccchhHHHHHhhhcceEEeccc
Q 048562 332 LLILEHTAVGGFMT--HCG--WNSTLESVSAGVPMVT-WPITA--EQFSNEKLISDVLKIGVKVGSV 391 (464)
Q Consensus 332 ~~lL~~~~~~~~It--HGG--~~s~~Eal~~GvP~v~-~P~~~--DQ~~na~~v~~~~G~G~~l~~~ 391 (464)
.++|..+++.+++- .-. ..-+.+++.+|+++++ -|+.. +|-.-...++++.|+-..+...
T Consensus 59 ~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~ 125 (354)
T 3db2_A 59 EALLAREDVEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHS 125 (354)
T ss_dssp HHHHHCSSCCEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECG
T ss_pred HHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeec
Confidence 78886655444442 222 3457789999999987 56543 4444444443677877666553
No 361
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=24.25 E-value=44 Score=31.39 Aligned_cols=39 Identities=8% Similarity=-0.018 Sum_probs=27.4
Q ss_pred CCcEEEEEcCCCccCHH----HHHHHHHHHHhCCCcEEEEeCC
Q 048562 6 SPVEMFFFPYVGGGHQI----PMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~----p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
+++||+++..+..+-.. ....++++|.+.||+|..+...
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 46788888754222222 4567899999999999987643
No 362
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=24.22 E-value=1.3e+02 Score=26.61 Aligned_cols=40 Identities=15% Similarity=0.026 Sum_probs=25.3
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|.+.++.. +++++..+ |- --..+++.|+++|++|.++...
T Consensus 1 m~~~l~~k-~vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 1 MDLGIQGK-LAVVTAGS-SG--LGFASALELARNGARLLLFSRN 40 (260)
T ss_dssp CCCCCTTC-EEEEETTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCCC-EEEEECCC-ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 54433333 44454433 32 3467899999999999887654
No 363
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=24.22 E-value=1e+02 Score=30.75 Aligned_cols=40 Identities=15% Similarity=0.176 Sum_probs=26.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhh
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKS 53 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 53 (464)
.++|+.. ++=.-++.+|+.|.+.|.++. ++......++..
T Consensus 11 ~~aLISV----sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~ 50 (523)
T 3zzm_A 11 RRALISV----YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT 50 (523)
T ss_dssp CEEEEEE----SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT
T ss_pred cEEEEEE----eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc
Confidence 3455554 234458899999999999865 444455555555
No 364
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=24.21 E-value=55 Score=29.49 Aligned_cols=32 Identities=6% Similarity=-0.073 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|||.|+..|..| ..+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 368888766555 36899999999999998654
No 365
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=24.21 E-value=50 Score=31.43 Aligned_cols=35 Identities=11% Similarity=0.135 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
++++||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 456899999766444 47899999999999988553
No 366
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=24.19 E-value=3.5e+02 Score=23.99 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=26.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
=|+++++.++.| --..+|+.|+++|.+|.++.-.
T Consensus 7 gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 7 NKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEECC
Confidence 467888876665 3577899999999999887543
No 367
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=24.15 E-value=3e+02 Score=22.55 Aligned_cols=48 Identities=8% Similarity=-0.085 Sum_probs=33.0
Q ss_pred cCCceeecccccccchhHHHHHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHhcC
Q 048562 358 AGVPMVTWPITAEQFSNEKLISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGT 419 (464)
Q Consensus 358 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~ 419 (464)
..+|+|++--..| ...+..+ -+.|+--++.+ -++.++|..+|+.++..
T Consensus 78 ~~~~ii~lt~~~~-~~~~~~a-~~~ga~~~l~K------------P~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 78 PRTTLVALVEYES-PAVLSQI-IELECHGVITQ------------PLDAHRVLPVLVSARRI 125 (196)
T ss_dssp TTCEEEEEECCCS-HHHHHHH-HHHTCSEEEES------------SCCGGGHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCC-hHHHHHH-HHcCCCeeEec------------CcCHHHHHHHHHHHHHH
Confidence 4688887754444 3455566 37887666654 47889999999988764
No 368
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=24.08 E-value=1.2e+02 Score=26.85 Aligned_cols=40 Identities=13% Similarity=0.026 Sum_probs=24.5
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+.+++. |.++++.++ | .--..+++.|+++||+|.++.-.
T Consensus 1 M~~m~~~-k~vlVTGas-~--gIG~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 1 MAHMVNG-KVALVTGAA-Q--GIGRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp -CCCCTT-CEEEEETTT-S--HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcccCC-CEEEEECCC-C--cHHHHHHHHHHHCCCEEEEEECC
Confidence 5543333 344454433 2 23457899999999999987654
No 369
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=24.03 E-value=1.3e+02 Score=23.62 Aligned_cols=29 Identities=7% Similarity=-0.002 Sum_probs=23.0
Q ss_pred cCHHHHHHHHHHHHhCCCcE-EEEeCCcch
Q 048562 19 GHQIPMVDIARIFAAHGAKS-TIITSPKHA 47 (464)
Q Consensus 19 GH~~p~l~la~~L~~rGh~V-t~~~~~~~~ 47 (464)
-.....+.+|..+.+.||+| .++-.....
T Consensus 15 ~~~~~al~~a~a~~~~g~~v~~vff~~dGV 44 (130)
T 2hy5_A 15 QASDSAYQFAKAALEKGHEIFRVFFYHDGV 44 (130)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred HHHHHHHHHHHHHHhcCCeeCEEEEechHH
Confidence 34567899999999999999 887766543
No 370
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=23.97 E-value=1.9e+02 Score=27.64 Aligned_cols=86 Identities=10% Similarity=-0.071 Sum_probs=49.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcccH
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAH-GAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSATP 86 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (464)
|||+++..++ ....+++.|+++ |++++++.+.. ... ... ..+ ++ + . .
T Consensus 1 mkililG~g~-----r~~a~a~~l~~~~g~~~v~~~~~~-~~~-~~~----------~~~--~~-~----~---~----- 48 (417)
T 2ip4_A 1 MKVLVVGSGG-----REHALLWKAAQSPRVKRLYAAPGN-AGM-EAL----------AEL--VP-W----N---G----- 48 (417)
T ss_dssp CEEEEEESSH-----HHHHHHHHHHTCSSCCEEEEEECC-TTG-GGT----------SEE--CC-C----C---S-----
T ss_pred CEEEEECCCH-----HHHHHHHHHHhCCCCCEEEEECCC-cch-hhh----------ccc--CC-C----c---c-----
Confidence 4788887763 467889999775 89988776432 111 111 111 11 0 0 0
Q ss_pred HHHHhhhHHHHHHhhhhCCCCEEEeCCCch---hhHHHHHHcCCCeEE
Q 048562 87 RTDTSMLQEPLKSLLVDSRPDCIVHDMFHH---WSADVINSMNIPRIV 131 (464)
Q Consensus 87 ~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~---~~~~~A~~~giP~v~ 131 (464)
-.+.+.+++++.++|+|+...-.. .....++.+|+|++.
T Consensus 49 ------d~~~l~~~~~~~~~d~v~~~~E~~~~~~~~~~l~~~gi~~~g 90 (417)
T 2ip4_A 49 ------DVEALADWALAEGIDLTLVGPEAPLVEGIADAFQARGLLLFG 90 (417)
T ss_dssp ------CHHHHHHHHHHHTCCEEEECSSHHHHTTHHHHHHHHTCCEES
T ss_pred ------CHHHHHHHHHHcCCCEEEECCchHHHHHHHHHHHHCCCCEEC
Confidence 123456667777899999864322 233445678999763
No 371
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=23.96 E-value=87 Score=26.55 Aligned_cols=36 Identities=14% Similarity=0.044 Sum_probs=29.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
..++++.++..|+-..+..+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 456777777777778899999999999999887755
No 372
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=23.96 E-value=73 Score=29.15 Aligned_cols=35 Identities=14% Similarity=0.128 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
|++|+++. +.|.+- ..|++.|.++||+|+.++-..
T Consensus 4 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYG--GTGYIG--KFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEET--TTSTTH--HHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEc--CCchhH--HHHHHHHHhCCCcEEEEECCc
Confidence 55666653 445443 368899999999999987654
No 373
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=23.77 E-value=68 Score=29.54 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=24.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEe
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIIT 42 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~ 42 (464)
||.|+-.+..|. ++|+.|.++||+|+++-
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred cEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 799999887774 68999999999998763
No 374
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=23.75 E-value=92 Score=24.21 Aligned_cols=36 Identities=11% Similarity=0.354 Sum_probs=22.9
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHHc-----CCCeEEEec
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINSM-----NIPRIVFNG 134 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~~-----giP~v~~~~ 134 (464)
+.+.+.+||+||.|...+ .+..+++.+ ++|.|.++.
T Consensus 43 ~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 43 QIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp HHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred HHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 455667899999997654 344444432 467776643
No 375
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=23.64 E-value=96 Score=24.45 Aligned_cols=42 Identities=12% Similarity=0.178 Sum_probs=0.0
Q ss_pred HHHHHhhhhCCCCEEEeCCCch--hhHHHHHHc-----CCCeEEEeccc
Q 048562 95 EPLKSLLVDSRPDCIVHDMFHH--WSADVINSM-----NIPRIVFNGNC 136 (464)
Q Consensus 95 ~~l~~~l~~~~pD~Vi~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 136 (464)
....+.+.+.+||+||.|.... .+..+.+.+ ++|.|.++...
T Consensus 37 ~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (155)
T 1qkk_A 37 TEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHG 85 (155)
T ss_dssp HHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGG
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCC
No 376
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=23.56 E-value=68 Score=25.00 Aligned_cols=42 Identities=10% Similarity=-0.100 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCccCH--HHHHHHHHHHHhCC--CcEEEEeCCcchh
Q 048562 7 PVEMFFFPYVGGGHQ--IPMVDIARIFAAHG--AKSTIITSPKHAL 48 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~--~p~l~la~~L~~rG--h~Vt~~~~~~~~~ 48 (464)
.+|++|+-+.+.-.. +-.+..|..+.++| |+|.++-......
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVK 52 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHH
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeee
Confidence 367777666532222 34777899999999 8999998765544
No 377
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=23.55 E-value=3.3e+02 Score=25.29 Aligned_cols=33 Identities=24% Similarity=0.131 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+++++..+.| --..+|+.|+++|++|.++.-.
T Consensus 46 k~vlVTGas~G---IG~aia~~La~~Ga~Vvl~~r~ 78 (346)
T 3kvo_A 46 CTVFITGASRG---IGKAIALKAAKDGANIVIAAKT 78 (346)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESC
T ss_pred CEEEEeCCChH---HHHHHHHHHHHCCCEEEEEECC
Confidence 56666665543 3467899999999999988654
No 378
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=23.52 E-value=1.3e+02 Score=23.29 Aligned_cols=65 Identities=9% Similarity=0.035 Sum_probs=42.6
Q ss_pred hcccCceeeccccchhh---------HHHHHHcCCceeecccccccchhHHHHHhhhcceEEeccccccCCCCCCCCccC
Q 048562 335 LEHTAVGGFMTHCGWNS---------TLESVSAGVPMVTWPITAEQFSNEKLISDVLKIGVKVGSVNWVSWSTEPSAAVG 405 (464)
Q Consensus 335 L~~~~~~~~ItHGG~~s---------~~Eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~ 405 (464)
+..+++ +|--.|..| +..|...|+|+|++=.++.+.. -..+ ++.+.- .+ ..+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~-P~~l-~~~a~~-iV--------------~Wn 96 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENV-PPEL-EAVSSE-VV--------------GWN 96 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCC-CTTH-HHHCSE-EE--------------CSC
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcC-CHHH-HhhCce-ec--------------cCC
Confidence 344555 777777666 6677889999999877765521 1113 233332 22 478
Q ss_pred hHHHHHHHHHHhc
Q 048562 406 RDKVEVAVKRLMG 418 (464)
Q Consensus 406 ~~~l~~ai~~il~ 418 (464)
.+.|.++|+..+.
T Consensus 97 ~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 97 PHCIRDALEDALD 109 (111)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHhccC
Confidence 9999999998764
No 379
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=23.51 E-value=1.8e+02 Score=26.06 Aligned_cols=34 Identities=9% Similarity=-0.008 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Q 048562 424 AEMRRRAGELGEKAKNAVEEGGSSFIDAEALLQELKSV 461 (464)
Q Consensus 424 ~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~~~~~ 461 (464)
+.|.++|+++.+++.. +.......++.|+.|..|
T Consensus 192 ~~f~~~ar~~t~~yA~----~~~~~~~~~~~v~~l~~m 225 (253)
T 3e46_A 192 EMFKQTARLWAHVYAG----APVSSPEYTKKIENLCAA 225 (253)
T ss_dssp HHHHHHHHHHHHHHHC----CSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcc----cccCcchHHHHHHHHHHc
Confidence 4788999999888773 222334557777777664
No 380
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=23.48 E-value=81 Score=23.56 Aligned_cols=36 Identities=22% Similarity=0.356 Sum_probs=22.0
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHH-------cCCCeEEEec
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINS-------MNIPRIVFNG 134 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~-------~giP~v~~~~ 134 (464)
+.+++.+||+||.|...+ .+..+++. ..+|.+.++.
T Consensus 39 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 83 (124)
T 1mb3_A 39 SIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTA 83 (124)
T ss_dssp HHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC-
T ss_pred HHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEEC
Confidence 445556899999997654 24444432 2577777744
No 381
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=23.48 E-value=2.9e+02 Score=25.16 Aligned_cols=32 Identities=22% Similarity=0.151 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
|+++++.++.| --..+|+.|+++|++|.++..
T Consensus 47 k~~lVTGas~G---IG~aia~~la~~G~~Vv~~~~ 78 (317)
T 3oec_A 47 KVAFITGAARG---QGRTHAVRLAQDGADIVAIDL 78 (317)
T ss_dssp CEEEESSCSSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCeEEEEec
Confidence 56777765543 346889999999999998754
No 382
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=23.40 E-value=4.4e+02 Score=24.30 Aligned_cols=129 Identities=21% Similarity=0.120 Sum_probs=70.8
Q ss_pred CcEEEEecCCCCCCCHHhHHHHHHHHhhC--CCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcc
Q 048562 252 NSVLYISFGSLARLSPEQLLEIAYGLEAS--NHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWA 329 (464)
Q Consensus 252 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~v 329 (464)
-.+.+|..|.+. ...+.++.+. +..++.++... .+ -.+.+.++. ++ ..+-
T Consensus 14 ~rvgiiG~G~~g-------~~~~~~l~~~~~~~~lvav~d~~----------~~----~~~~~~~~~-----~~--~~~~ 65 (354)
T 3q2i_A 14 IRFALVGCGRIA-------NNHFGALEKHADRAELIDVCDID----------PA----ALKAAVERT-----GA--RGHA 65 (354)
T ss_dssp EEEEEECCSTTH-------HHHHHHHHHTTTTEEEEEEECSS----------HH----HHHHHHHHH-----CC--EEES
T ss_pred ceEEEEcCcHHH-------HHHHHHHHhCCCCeEEEEEEcCC----------HH----HHHHHHHHc-----CC--ceeC
Confidence 348889998886 2345666665 55666565443 11 011222221 22 2345
Q ss_pred cHHHHhcccCceeecc--ccc--hhhHHHHHHcCCceee-ccccc--ccchhHHHHHhhhcceEEeccccccCCCCCCCC
Q 048562 330 PQLLILEHTAVGGFMT--HCG--WNSTLESVSAGVPMVT-WPITA--EQFSNEKLISDVLKIGVKVGSVNWVSWSTEPSA 402 (464)
Q Consensus 330 pq~~lL~~~~~~~~It--HGG--~~s~~Eal~~GvP~v~-~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~ 402 (464)
...++|..+++.+++- .-. ..-+.+++.+|+++++ -|+.. ++-.....++++.|+-..+... .
T Consensus 66 ~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~----------~ 135 (354)
T 3q2i_A 66 SLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQ----------N 135 (354)
T ss_dssp CHHHHHHHCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCG----------G
T ss_pred CHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEc----------c
Confidence 6777887555444442 222 2356789999999988 57643 3443433333677877766543 1
Q ss_pred ccChHHHHHHHHHHhcCC
Q 048562 403 AVGRDKVEVAVKRLMGTG 420 (464)
Q Consensus 403 ~~~~~~l~~ai~~il~~~ 420 (464)
...+ ....+++++.++
T Consensus 136 r~~p--~~~~~k~~i~~g 151 (354)
T 3q2i_A 136 RRNA--TLQLLKRAMQEK 151 (354)
T ss_dssp GGSH--HHHHHHHHHHTT
T ss_pred cCCH--HHHHHHHHHhcC
Confidence 3444 345666666544
No 383
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=23.38 E-value=3e+02 Score=24.33 Aligned_cols=94 Identities=13% Similarity=-0.021 Sum_probs=49.2
Q ss_pred cEEEEEcCCCccCH-HHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcccH
Q 048562 8 VEMFFFPYVGGGHQ-IPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSATP 86 (464)
Q Consensus 8 ~~vl~~~~~~~GH~-~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (464)
|||+++..-+.-++ ..+...++.+..-|.+|.+++.+.... .+ +.....
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~~gp~-------------------~i-----------~~~~d~ 51 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPRAGVP-------------------SI-----------EGHFDE 51 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCSSSCS-------------------SC-----------CSHHHH
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCch-------------------hh-----------cChhHH
Confidence 46666655544444 455667776666677777766541100 00 111111
Q ss_pred HHHHhhhHHHHHHhhhhCCCCEEEeCCCchh-hHHHHHHcCCCeEEE
Q 048562 87 RTDTSMLQEPLKSLLVDSRPDCIVHDMFHHW-SADVINSMNIPRIVF 132 (464)
Q Consensus 87 ~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~~-~~~~A~~~giP~v~~ 132 (464)
......+.+.++ .+++..+|.|+.--+... .-.+-+.+++|++.+
T Consensus 52 ~~a~~~l~~~~~-~l~~~g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 52 AIAAVGVLEQIR-AGREQGVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp HHHHHHHHHHHH-HHHHHTCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred HHHHHHHHHHHH-HHHHCCCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 222222333332 233568999988866553 334555679999875
No 384
>3lac_A Pyrrolidone-carboxylate peptidase; alpha beta class, three layer sandwich, hydrolase, protease, thiol protease, structural genomics; 2.00A {Bacillus anthracis}
Probab=23.38 E-value=79 Score=27.67 Aligned_cols=27 Identities=15% Similarity=0.218 Sum_probs=21.1
Q ss_pred CcEEEEEcCC-Ccc-CHHHHHHHHHHHHh
Q 048562 7 PVEMFFFPYV-GGG-HQIPMVDIARIFAA 33 (464)
Q Consensus 7 ~~~vl~~~~~-~~G-H~~p~l~la~~L~~ 33 (464)
|+|||+..++ ..| -+||...++++|..
T Consensus 1 m~~VLvTGF~PF~~~~~NPS~~~v~~L~~ 29 (215)
T 3lac_A 1 MKTVLLTGFDPFGGESINPAWEVAKSLHE 29 (215)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHTTTT
T ss_pred CCEEEEEecCCCCCCCCChHHHHHHHhcc
Confidence 5788888876 333 47999999999987
No 385
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=23.34 E-value=82 Score=26.46 Aligned_cols=37 Identities=19% Similarity=0.202 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCccCHHHHHH-HHHHHHh-CCCcEEEEeC
Q 048562 7 PVEMFFFPYVGGGHQIPMVD-IARIFAA-HGAKSTIITS 43 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~-la~~L~~-rGh~Vt~~~~ 43 (464)
|+||+++-....|+..-+.. +++.|.+ .|++|.++--
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l 39 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRV 39 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEEC
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEc
Confidence 46787777666777665544 4666666 7888887654
No 386
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=23.33 E-value=38 Score=32.18 Aligned_cols=39 Identities=5% Similarity=-0.009 Sum_probs=27.0
Q ss_pred CCcEEEEEcCCCccCH----HHHHHHHHHHHhCCCcEEEEeCC
Q 048562 6 SPVEMFFFPYVGGGHQ----IPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~----~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
+++||+++..+-.+-. .-...++++|.++||+|..+...
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 4678888876533222 23477889999999999988643
No 387
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=23.28 E-value=1.3e+02 Score=23.61 Aligned_cols=39 Identities=15% Similarity=0.182 Sum_probs=24.8
Q ss_pred HHhhhhCCCCEEEeCCCch--hhHHHHHH-----cCCCeEEEeccc
Q 048562 98 KSLLVDSRPDCIVHDMFHH--WSADVINS-----MNIPRIVFNGNC 136 (464)
Q Consensus 98 ~~~l~~~~pD~Vi~D~~~~--~~~~~A~~-----~giP~v~~~~~~ 136 (464)
.+.+++.+||+||.|.... .+..+++. -++|.|.++...
T Consensus 44 ~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 44 YRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp HHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 3556677899999997643 23333332 257888876543
No 388
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=23.26 E-value=3.3e+02 Score=23.10 Aligned_cols=43 Identities=9% Similarity=-0.016 Sum_probs=28.0
Q ss_pred EEecCccc-HHHH-hcccCceeeccccchhhHHHHH---------HcCCceeecc
Q 048562 323 LIIRGWAP-QLLI-LEHTAVGGFMTHCGWNSTLESV---------SAGVPMVTWP 366 (464)
Q Consensus 323 v~v~~~vp-q~~l-L~~~~~~~~ItHGG~~s~~Eal---------~~GvP~v~~P 366 (464)
+.++++.. ...+ +.+++. .++--||.||+-|.. .+++|++.+-
T Consensus 92 ~i~~~~~~~Rk~~m~~~sda-~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 92 LVVTETMWERKQVMEDRANA-FITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred eEEcCCHHHHHHHHHHHCCE-EEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 34445544 3333 445554 677889999998874 2689999884
No 389
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=23.17 E-value=65 Score=29.75 Aligned_cols=41 Identities=15% Similarity=0.040 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcc-hhhhhhh
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKH-ALSFQKS 53 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~-~~~~~~~ 53 (464)
++||+|+..|+.|- .+|..|. .||+|+++..... .+.+.+.
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~~ 43 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQSE 43 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHhC
Confidence 36899998877664 5688888 9999999987643 3444444
No 390
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=23.10 E-value=91 Score=25.80 Aligned_cols=51 Identities=6% Similarity=0.154 Sum_probs=36.3
Q ss_pred cHHHHHhhhHHHHHHhhhhCCCCEEEeCCCch---------------hhHHHHHHcCCCeEEEecc
Q 048562 85 TPRTDTSMLQEPLKSLLVDSRPDCIVHDMFHH---------------WSADVINSMNIPRIVFNGN 135 (464)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~~---------------~~~~~A~~~giP~v~~~~~ 135 (464)
.+...+..+...+.+++.+.+||.+..+..+. ....++...|+|+.-+.+.
T Consensus 39 ~~~~Rl~~i~~~l~~~i~~~~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp~ 104 (158)
T 1hjr_A 39 DLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAAR 104 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 34444556788899999999999999887542 1234556678998888554
No 391
>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli}
Probab=23.03 E-value=1.8e+02 Score=34.67 Aligned_cols=90 Identities=14% Similarity=0.091 Sum_probs=57.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCccc
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSAT 85 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (464)
+...++++-.++.|-..-.+.++.+.+++|+.|.|+............ . .|.++.-..+..| ..
T Consensus 1426 ~g~~vll~GppGtGKT~LA~ala~ea~~~G~~v~Fi~~e~~~~~l~a~--~---~G~dl~~l~v~~~--------~~--- 1489 (2050)
T 3cmu_A 1426 MGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAR--K---LGVDIDNLLCSQP--------DT--- 1489 (2050)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEECTTSCCCHHHHH--H---TTCCTTTCEEECC--------SS---
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEEEcccccCHHHHH--H---cCCCchhceeecC--------Ch---
Confidence 345678888889999999999999999999999999987543222211 0 0211110011001 00
Q ss_pred HHHHHhhhHHHHHHhhhhCCCCEEEeCCCc
Q 048562 86 PRTDTSMLQEPLKSLLVDSRPDCIVHDMFH 115 (464)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~ 115 (464)
.+.....++.++++.+||+||.|...
T Consensus 1490 ----~E~~l~~~~~lvr~~~~~lVVIDsi~ 1515 (2050)
T 3cmu_A 1490 ----GEQALEICDALARSGAVDVIVVDSVA 1515 (2050)
T ss_dssp ----HHHHHHHHHHHHHHTCCSEEEESCGG
T ss_pred ----HHHHHHHHHHHHhcCCCCEEEEcChh
Confidence 12334566677788999999999874
No 392
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=23.02 E-value=1.4e+02 Score=26.23 Aligned_cols=40 Identities=13% Similarity=0.070 Sum_probs=25.6
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|...++..+++ ++.++ |- --..+++.|+++|++|+++...
T Consensus 1 m~~~~~~k~vl-ITGas-gg--iG~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 1 MQNRLRSALAL-VTGAG-SG--IGRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CCCCCTTCEEE-EETTT-SH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CccccCCCEEE-EECCC-Ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 55445444444 44333 32 3467899999999999987654
No 393
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=22.96 E-value=49 Score=30.34 Aligned_cols=31 Identities=6% Similarity=0.041 Sum_probs=24.7
Q ss_pred hcccCceeeccccchhhHHHHHHc----CCceeeccc
Q 048562 335 LEHTAVGGFMTHCGWNSTLESVSA----GVPMVTWPI 367 (464)
Q Consensus 335 L~~~~~~~~ItHGG~~s~~Eal~~----GvP~v~~P~ 367 (464)
-..+++ +|+=||=||+.+++.. ++|+++++.
T Consensus 61 ~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 61 GQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred ccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 334555 9999999999999753 789999873
No 394
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=22.80 E-value=3e+02 Score=32.12 Aligned_cols=104 Identities=16% Similarity=0.121 Sum_probs=0.0
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcccHHHH
Q 048562 10 MFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSATPRTD 89 (464)
Q Consensus 10 vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (464)
+++...|+.|-..-++.++...+++|..|.|++.+...+.+..... |.+..-..+-.++ .
T Consensus 386 ilI~G~pGsGKTtLaLq~a~~~~~~G~~vlyis~E~s~~~~~a~~l-----Gvd~~~L~i~~~~---------------~ 445 (1706)
T 3cmw_A 386 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKL-----GVDIDNLLCSQPD---------------T 445 (1706)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEECTTSCCCHHHHHHT-----TCCGGGCEEECCS---------------S
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHc-----CCCHHHeEEcCCC---------------C
Q ss_pred HhhhHHHHHHhhhhCCCCEEEeCCCchhh----------------------------HHHHHHcCCCeEEEe
Q 048562 90 TSMLQEPLKSLLVDSRPDCIVHDMFHHWS----------------------------ADVINSMNIPRIVFN 133 (464)
Q Consensus 90 ~~~~~~~l~~~l~~~~pD~Vi~D~~~~~~----------------------------~~~A~~~giP~v~~~ 133 (464)
.+.....+..++++.++|+||.|...... ..+|+.+|+|++.++
T Consensus 446 ~e~~l~~l~~lv~~~~~~lVVIDSL~al~~~~e~e~~~g~~~~~~q~r~~s~~Lr~L~~~ak~~~v~VI~in 517 (1706)
T 3cmw_A 446 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFIN 517 (1706)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEESCSTTCCCHHHHHSCTTCCCTTHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCEEEEEe
No 395
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=22.80 E-value=39 Score=33.84 Aligned_cols=39 Identities=15% Similarity=0.314 Sum_probs=26.7
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|.+.+.+.+|+++-.+-.| +.+|..|+++|++|+++-..
T Consensus 1 M~~~~~~~dVvIVGgG~aG-----l~aA~~La~~G~~V~liE~~ 39 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGG-----STLASFVAMRGHRVLLLERE 39 (512)
T ss_dssp ----CEEEEEEEECCSHHH-----HHHHHHHHTTTCCEEEECSS
T ss_pred CCCCCccCCEEEECcCHHH-----HHHHHHHHhCCCCEEEEccC
Confidence 5544445678888776444 67788899999999999654
No 396
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=22.72 E-value=92 Score=23.46 Aligned_cols=37 Identities=5% Similarity=0.194 Sum_probs=23.0
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHHc-------CCCeEEEecc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINSM-------NIPRIVFNGN 135 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~~-------giP~v~~~~~ 135 (464)
+.+++.+||+||.|...+ .+..+++.+ ++|.+.++..
T Consensus 45 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 90 (129)
T 1p6q_A 45 KIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 90 (129)
T ss_dssp HHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSC
T ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCC
Confidence 455667899999997654 344444433 3556665443
No 397
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=22.69 E-value=2.3e+02 Score=24.64 Aligned_cols=88 Identities=11% Similarity=0.087 Sum_probs=0.0
Q ss_pred CcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEE---EccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCc
Q 048562 252 NSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWV---VGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGW 328 (464)
Q Consensus 252 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~---~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~ 328 (464)
++..+||.|... ......++..+.+-+++=+ +... +...+.+ ...+.+..+
T Consensus 68 ~g~~lVsGGg~G-----iM~aa~~gAl~~gG~~iGV~~~~P~~----------~~~~~~~-----------t~~~~~~~f 121 (217)
T 1wek_A 68 AGFGVVTGGGPG-----VMEAVNRGAYEAGGVSVGLNIELPHE----------QKPNPYQ-----------THALSLRYF 121 (217)
T ss_dssp HTCEEEECSCSH-----HHHHHHHHHHHTTCCEEEEEECCTTC----------CCCCSCC-----------SEEEEESCH
T ss_pred CCCEEEeCChhh-----HHHHHHHHHHHcCCCEEEEeeCCcch----------hhccccC-----------CcCcccCCH
Q ss_pred ccHHHHhcccCceeeccccchhhHHHHHH----------cCCceeec
Q 048562 329 APQLLILEHTAVGGFMTHCGWNSTLESVS----------AGVPMVTW 365 (464)
Q Consensus 329 vpq~~lL~~~~~~~~ItHGG~~s~~Eal~----------~GvP~v~~ 365 (464)
--...++..-+...++--||.||+-|... +++|++.+
T Consensus 122 ~~Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll 168 (217)
T 1wek_A 122 FVRKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLL 168 (217)
T ss_dssp HHHHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEE
T ss_pred HHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEe
No 398
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=22.68 E-value=1.3e+02 Score=22.59 Aligned_cols=37 Identities=8% Similarity=0.195 Sum_probs=23.9
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHHc-------CCCeEEEecc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINSM-------NIPRIVFNGN 135 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~~-------giP~v~~~~~ 135 (464)
+.+.+.+||+||.|...+ .+..+++.+ .+|.+.++..
T Consensus 43 ~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~ 88 (128)
T 1jbe_A 43 NKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAE 88 (128)
T ss_dssp HHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESS
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecC
Confidence 455667899999997654 344444432 4677777654
No 399
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=22.65 E-value=2.2e+02 Score=25.41 Aligned_cols=33 Identities=21% Similarity=0.115 Sum_probs=23.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+++++.++.| --..+|+.|+++|++|.++...
T Consensus 32 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 32 RTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcCH
Confidence 55666655432 3467899999999999988743
No 400
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=22.61 E-value=3.1e+02 Score=30.55 Aligned_cols=99 Identities=13% Similarity=0.008 Sum_probs=55.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcccH
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSATP 86 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (464)
+.|||++. .|. -.+.+++++.+.|+++..+.+.......... .--..+.++.+ ... ...+
T Consensus 4 ~kkVLIag---rGe--ia~riiraa~elGi~vVav~s~~d~~s~~~~--------~ADe~~~ig~~----~~~---~~sy 63 (1150)
T 3hbl_A 4 IKKLLVAN---RGE--IAIRIFRAAAELDISTVAIYSNEDKSSLHRY--------KADESYLVGSD----LGP---AESY 63 (1150)
T ss_dssp CCEEEECC---CHH--HHHHHHHHHHHTTCEEEEEECGGGTTCGGGG--------TSSEEEECCTT----SCT---TGGG
T ss_pred CCEEEEEC---CCH--HHHHHHHHHHHCCCEEEEEEcCCcccchhhh--------hcceeeecCCC----CCc---cccc
Confidence 56777743 232 4578999999999999988765443222111 01133333311 000 0010
Q ss_pred HHHHhhhHHHHHHhhhhCCCCEEEeCCCc----hhhHHHHHHcCCCeE
Q 048562 87 RTDTSMLQEPLKSLLVDSRPDCIVHDMFH----HWSADVINSMNIPRI 130 (464)
Q Consensus 87 ~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~----~~~~~~A~~~giP~v 130 (464)
.-.+.+.+++++.++|+|+...-+ .....+++.+|+|++
T Consensus 64 -----ld~~~Ii~~a~~~~~DaI~pg~gflsE~~~~a~~le~~Gi~~i 106 (1150)
T 3hbl_A 64 -----LNIERIIDVAKQANVDAIHPGYGFLSENEQFARRCAEEGIKFI 106 (1150)
T ss_dssp -----TCHHHHHHHHHHTTCSEEECTTTTSTTCHHHHHHHHHTTCEES
T ss_pred -----cCHHHHHHHHHHhCCCEEEECCCcccccHHHHHHHHHCCCCee
Confidence 013566677888899999954221 124456667888876
No 401
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=22.59 E-value=88 Score=27.93 Aligned_cols=36 Identities=14% Similarity=0.102 Sum_probs=25.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
|.+.|+++++.++.| --..+|+.|+++|++|.+...
T Consensus 23 m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 344567777765442 346889999999999987644
No 402
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=22.55 E-value=1.1e+02 Score=26.85 Aligned_cols=41 Identities=20% Similarity=0.138 Sum_probs=26.8
Q ss_pred CCCCCC-CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSS-PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~-~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|...+. +-|+++++.++.| --..+|+.|+++|++|.+....
T Consensus 1 M~~~~~l~gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 1 MSQFMNLEGKVALVTGASRG---IGKAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp -CCTTCCTTCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CccccCCCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 454332 3456677665432 3467899999999999887654
No 403
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=22.52 E-value=1.3e+02 Score=22.68 Aligned_cols=25 Identities=24% Similarity=0.165 Sum_probs=16.9
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHH
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVIN 123 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~ 123 (464)
+.+++.+||+||.|.... .+..+++
T Consensus 44 ~~l~~~~~dlii~d~~l~~~~g~~~~~ 70 (132)
T 3lte_A 44 IKLSTFEPAIMTLDLSMPKLDGLDVIR 70 (132)
T ss_dssp HHHHHTCCSEEEEESCBTTBCHHHHHH
T ss_pred HHHHhcCCCEEEEecCCCCCCHHHHHH
Confidence 455678899999997654 3444443
No 404
>1x10_A Pyrrolidone-carboxylate peptidase; stability of protein, hydrolase; 2.00A {Pyrococcus furiosus} PDB: 1z8t_A 1z8x_A 1ioi_A 1x12_A 1z8w_A 2eo8_A 1iof_A 2df5_A
Probab=22.51 E-value=76 Score=27.63 Aligned_cols=27 Identities=19% Similarity=0.301 Sum_probs=20.0
Q ss_pred cEEEEEcCC--CccCHHHHHHHHHHHHhC
Q 048562 8 VEMFFFPYV--GGGHQIPMVDIARIFAAH 34 (464)
Q Consensus 8 ~~vl~~~~~--~~GH~~p~l~la~~L~~r 34 (464)
||||+..+. +.=-+||...++++|...
T Consensus 1 m~VLvTGF~PF~~~~~NPS~~~v~~L~~~ 29 (208)
T 1x10_A 1 MKVLVTGFEPFGGEKINPTERIAKDLDGI 29 (208)
T ss_dssp CEEEEEEECCCTTCSCCHHHHHHHHHTTC
T ss_pred CEEEEEeecCCCCCCCChHHHHHHHhhcc
Confidence 457777655 223568999999999976
No 405
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=22.50 E-value=4.4e+02 Score=24.04 Aligned_cols=93 Identities=16% Similarity=0.139 Sum_probs=54.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC------CCcEEEEeCCcc--hhhhhhhhhhccCCCCCe-----EEEEecCCCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAH------GAKSTIITSPKH--ALSFQKSINRNQQSGLPI-----TIKTLHLPDD 74 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~r------Gh~Vt~~~~~~~--~~~~~~~~~~~~~~g~~~-----~~~~~~~~~~ 74 (464)
.-+++...++.|-..-++.++...+.. |..|.|++.... .+.+.....+. |... ++....
T Consensus 108 ~i~~i~G~~GsGKT~la~~la~~~~~~~~~gg~~~~vlyi~~e~~~~~~~l~~~~~~~---g~~~~~~~~~l~~~~---- 180 (324)
T 2z43_A 108 TMTEFFGEFGSGKTQLCHQLSVNVQLPPEKGGLSGKAVYIDTEGTFRWERIENMAKAL---GLDIDNVMNNIYYIR---- 180 (324)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHTTSCGGGTCCSCEEEEEESSSCCCHHHHHHHHHHT---TCCHHHHHHTEEEEE----
T ss_pred cEEEEECCCCCCHhHHHHHHHHHHhcccccCCCCCeEEEEECCCCCCHHHHHHHHHHh---CCCHHHHhccEEEEe----
Confidence 346677777999999999998887655 889999988764 33333221111 1111 001000
Q ss_pred CCCCCCCCcccHHHHHhhhHHHHHHhhhh-CCCCEEEeCCCch
Q 048562 75 IEIPDTDMSATPRTDTSMLQEPLKSLLVD-SRPDCIVHDMFHH 116 (464)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~pD~Vi~D~~~~ 116 (464)
. ... .....+...+.+++++ .++++||.|....
T Consensus 181 ----~-~~~----~~~~~~l~~l~~~~~~~~~~~lvVIDsl~~ 214 (324)
T 2z43_A 181 ----A-INT----DHQIAIVDDLQELVSKDPSIKLIVVDSVTS 214 (324)
T ss_dssp ----C-CSH----HHHHHHHHHHHHHHHHCTTEEEEEETTTTH
T ss_pred ----C-CCH----HHHHHHHHHHHHHHHhccCCCEEEEeCcHH
Confidence 0 000 1111234556667777 7899999998764
No 406
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=22.46 E-value=2.2e+02 Score=29.52 Aligned_cols=98 Identities=12% Similarity=0.001 Sum_probs=53.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCcccH
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSATP 86 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (464)
+.|||++.- |. -.+.+++.+++.|+++..+.+........... .+ ..+.++.. .....+.
T Consensus 28 ~~kILI~g~---Ge--ia~~iiraar~lGi~~vav~s~~d~~a~~~~~-------AD-~~~~i~~~-----~~~~syl-- 87 (675)
T 3u9t_A 28 IQRLLVANR---GE--IACRVMRSARALGIGSVAVHSDIDRHARHVAE-------AD-IAVDLGGA-----KPADSYL-- 87 (675)
T ss_dssp CSEEEECCC---HH--HHHHHHHHHHHHTCEEEEEECSGGGGCHHHHT-------CS-EEEECCCS-----SGGGTTT--
T ss_pred CCEEEEECC---CH--HHHHHHHHHHHCCCEEEEEECCCCCCchhHhh-------CC-EEEEcCCC-----ccccCcc--
Confidence 456777643 33 37888999999999998887654433221110 01 23333210 0000010
Q ss_pred HHHHhhhHHHHHHhhhhCCCCEEEeCC-Cch---hhHHHHHHcCCCeE
Q 048562 87 RTDTSMLQEPLKSLLVDSRPDCIVHDM-FHH---WSADVINSMNIPRI 130 (464)
Q Consensus 87 ~~~~~~~~~~l~~~l~~~~pD~Vi~D~-~~~---~~~~~A~~~giP~v 130 (464)
-.+.+.+++++.++|+|+... +.. ....+.+..|++++
T Consensus 88 ------d~~~i~~~a~~~~~daI~pg~gflsE~~~~a~~le~~Gi~~i 129 (675)
T 3u9t_A 88 ------RGDRIIAAALASGAQAIHPGYGFLSENADFARACEEAGLLFL 129 (675)
T ss_dssp ------CHHHHHHHHHHTTCSEEECCSSTTTTCHHHHHHHHTTTCEES
T ss_pred ------CHHHHHHHHHHhCcCEEEeCCcccccCHHHHHHHHHcCCcee
Confidence 135667777888899998443 211 23345556787765
No 407
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=22.37 E-value=1.3e+02 Score=22.76 Aligned_cols=40 Identities=5% Similarity=0.023 Sum_probs=25.1
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+...++.+|+++-- +-.-...+.+.|.+.|++|..+...
T Consensus 1 Ms~~~~~~~ilivdd----~~~~~~~l~~~L~~~g~~v~~~~~~ 40 (136)
T 3hdv_A 1 MSLVAARPLVLVVDD----NAVNREALILYLKSRGIDAVGADGA 40 (136)
T ss_dssp ------CCEEEEECS----CHHHHHHHHHHHHHTTCCEEEESSH
T ss_pred CCCCCCCCeEEEECC----CHHHHHHHHHHHHHcCceEEEeCCH
Confidence 665566888988764 4555667788888889998876543
No 408
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.33 E-value=97 Score=23.90 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=23.1
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHH-----cCCCeEEEecc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINS-----MNIPRIVFNGN 135 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~-----~giP~v~~~~~ 135 (464)
+.+.+.+||+||.|...+ .+..+++. ..+|.|.++..
T Consensus 42 ~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~ 85 (137)
T 3cfy_A 42 QFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAH 85 (137)
T ss_dssp HHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEec
Confidence 445566899999997654 34444433 24677776554
No 409
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=22.31 E-value=80 Score=29.36 Aligned_cols=38 Identities=21% Similarity=0.245 Sum_probs=32.2
Q ss_pred cEEEEEc-CCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 8 VEMFFFP-YVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 8 ~~vl~~~-~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
.+|+|+. -++-|-..-...+|..|+++|++|.++....
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4555554 5699999999999999999999999998876
No 410
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=22.29 E-value=68 Score=29.03 Aligned_cols=35 Identities=9% Similarity=0.031 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
|++|+++. +.|.+- ..|+++|.++||+|+.++-..
T Consensus 2 ~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILG--PTGAIG--RHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEEC--CCchHH--HHHHHHHHhCCCcEEEEECCC
Confidence 45666653 444443 467899999999999887653
No 411
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=22.28 E-value=1.4e+02 Score=26.48 Aligned_cols=40 Identities=15% Similarity=-0.003 Sum_probs=24.3
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|...++.+++ +++.++ |- --..+++.|+++||+|.+..-.
T Consensus 1 M~~~l~~k~v-lVTGas-~g--IG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 1 MSGRLTGKVA-LVSGGA-RG--MGASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp -CCTTTTCEE-EEETTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCCCEE-EEeCCC-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 5433434444 444433 32 3457899999999999887654
No 412
>1iu8_A Pyrrolidone-carboxylate peptidase; hydrolase, thiol protease, complete proteome; 1.60A {Pyrococcus horikoshii} SCOP: c.56.4.1
Probab=22.26 E-value=1.2e+02 Score=26.40 Aligned_cols=63 Identities=21% Similarity=0.353 Sum_probs=40.0
Q ss_pred cEEEEEcCC--CccCHHHHHHHHHHHHhCCCcEEEEeCCcchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCCccc
Q 048562 8 VEMFFFPYV--GGGHQIPMVDIARIFAAHGAKSTIITSPKHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDMSAT 85 (464)
Q Consensus 8 ~~vl~~~~~--~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (464)
||||+..++ +.--+||...++++|... + . .+....+|. .
T Consensus 1 m~VLvTGF~PF~~~~~NPS~~~v~~L~~~---i--------------~---------~i~~~~lPv-------------~ 41 (206)
T 1iu8_A 1 MKILLTGFEPFGGDDKNPTMDIVEALSER---I--------------P---------EVVGEILPV-------------S 41 (206)
T ss_dssp CCEEEEEECCCTTCSCCHHHHHHHHHHHH---C--------------T---------TEEEEEECS-------------C
T ss_pred CEEEEEeecCCCCCCCCcHHHHHHHhccc---e--------------e---------EEEEEEEEe-------------E
Confidence 347776655 333578999999999875 1 1 244455552 1
Q ss_pred HHHHHhhhHHHHHHhhhhCCCCEEEeCC
Q 048562 86 PRTDTSMLQEPLKSLLVDSRPDCIVHDM 113 (464)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~~~pD~Vi~D~ 113 (464)
+. ...+.+.+++++.+||+||+=.
T Consensus 42 ~~----~~~~~l~~~~~~~~Pd~vi~vG 65 (206)
T 1iu8_A 42 FK----RAREKLLKVLDDVRPDITINLG 65 (206)
T ss_dssp HH----HHHHHHHHHHHHHCCSEEEEEE
T ss_pred HH----HHHHHHHHHHHHhCCCEEEEcc
Confidence 11 2345566777778999998764
No 413
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=22.25 E-value=79 Score=28.61 Aligned_cols=34 Identities=9% Similarity=0.108 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|++|+++. +.|.+- ..|++.|.++||+|+.++-.
T Consensus 4 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLIG--ATGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEEc--CCcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 56676664 334332 46789999999999987764
No 414
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=21.98 E-value=66 Score=27.81 Aligned_cols=40 Identities=10% Similarity=-0.066 Sum_probs=30.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEeCCcc
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAH-GAKSTIITSPKH 46 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~ 46 (464)
.|.||+|+..++...+. +...++.|.++ |++|++++....
T Consensus 2 ~m~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~~ 42 (206)
T 3f5d_A 2 SLKKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDPI 42 (206)
T ss_dssp -CEEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSSE
T ss_pred CccEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCCC
Confidence 47889999888776654 44667788887 999999988653
No 415
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=21.96 E-value=1e+02 Score=23.51 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=23.8
Q ss_pred HhhhhCCCCEEEeCCCch---hhHHHHHH----cCCCeEEEeccc
Q 048562 99 SLLVDSRPDCIVHDMFHH---WSADVINS----MNIPRIVFNGNC 136 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~---~~~~~A~~----~giP~v~~~~~~ 136 (464)
+.+.+.+||+||.|.... .+..+++. .++|.|.++...
T Consensus 48 ~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 48 RCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp HHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred HHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 444556799999996542 23333333 478888886543
No 416
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=21.95 E-value=87 Score=31.16 Aligned_cols=36 Identities=14% Similarity=-0.030 Sum_probs=29.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CC-cEEEEeCCc
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAH-GA-KSTIITSPK 45 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~r-Gh-~Vt~~~~~~ 45 (464)
++++||.|+..|..| ..+|..|+++ || +|+++....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 357899999888777 4789999999 99 999986543
No 417
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=21.93 E-value=37 Score=29.40 Aligned_cols=33 Identities=12% Similarity=0.118 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
|||+++.. |.+ -..+|+.|.++||+|+++....
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECCH
Confidence 35777754 332 4578999999999999997643
No 418
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=21.82 E-value=65 Score=32.11 Aligned_cols=36 Identities=8% Similarity=0.017 Sum_probs=28.2
Q ss_pred HHHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEE
Q 048562 94 QEPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVF 132 (464)
Q Consensus 94 ~~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~ 132 (464)
...+.+++++.+||++|.... ...+|+++|||++.+
T Consensus 390 ~~el~~~i~~~~pDL~ig~~~---~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 390 ARVLLKTVDEYQADILIAGGR---NMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHHHTTCSEEECCGG---GHHHHHHTTCCBCCC
T ss_pred HHHHHHHHHhcCCCEEEECCc---hhHHHHHcCCCEEEe
Confidence 345667788899999998643 556899999999865
No 419
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=21.82 E-value=90 Score=25.97 Aligned_cols=29 Identities=21% Similarity=0.138 Sum_probs=23.4
Q ss_pred EEEEecCCCCCCCHHhHHHHHHHHhhCCC
Q 048562 254 VLYISFGSLARLSPEQLLEIAYGLEASNH 282 (464)
Q Consensus 254 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~ 282 (464)
.+|+++||....+.+.+...+.+|.+.+.
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~~~ 34 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEYDG 34 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHSTT
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCCC
Confidence 69999999997677778888888887543
No 420
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=21.81 E-value=1.1e+02 Score=27.07 Aligned_cols=33 Identities=12% Similarity=-0.096 Sum_probs=22.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|.++++.++. - --..+|+.|+++|++|.++.-.
T Consensus 10 k~vlVTGas~-g--iG~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 10 CTALVTGGSR-G--IGYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp CEEEEESCSS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc-H--HHHHHHHHHHHCCCEEEEEeCC
Confidence 4455554433 2 3457899999999999887654
No 421
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=21.80 E-value=74 Score=24.58 Aligned_cols=38 Identities=24% Similarity=0.267 Sum_probs=21.7
Q ss_pred HHhhhhCCCCEEEeCCCch--hhHHHHH----H---cCCCeEEEecc
Q 048562 98 KSLLVDSRPDCIVHDMFHH--WSADVIN----S---MNIPRIVFNGN 135 (464)
Q Consensus 98 ~~~l~~~~pD~Vi~D~~~~--~~~~~A~----~---~giP~v~~~~~ 135 (464)
.+.+++.+||+||.|.... .+..+++ . -++|.|.++..
T Consensus 39 ~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 39 LEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp HHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred HHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 3455667899999997643 2222222 2 36787777543
No 422
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=21.77 E-value=86 Score=28.37 Aligned_cols=35 Identities=9% Similarity=0.051 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
+.|+++++.++.| --..+|+.|+++|++|.+++-.
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3467777765543 3457899999999999888754
No 423
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=21.77 E-value=2.9e+02 Score=25.89 Aligned_cols=40 Identities=10% Similarity=0.062 Sum_probs=33.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcch
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHA 47 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~ 47 (464)
.-+++...++.|-..-++.++..++.+|..|.|++.....
T Consensus 62 ~iv~I~G~pGsGKTtLal~la~~~~~~g~~vlyi~~E~~~ 101 (349)
T 2zr9_A 62 RVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHAL 101 (349)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEECCCCc
Confidence 3467777779999999999999999999999999886543
No 424
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=21.72 E-value=95 Score=27.54 Aligned_cols=34 Identities=18% Similarity=0.071 Sum_probs=23.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
-|+++++.++.| --..+|+.|+++|++|.+....
T Consensus 8 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 8 NRTIVVAGAGRD---IGRACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECS
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcCC
Confidence 355666655443 3468899999999999887443
No 425
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=21.68 E-value=3.5e+02 Score=22.54 Aligned_cols=112 Identities=10% Similarity=0.078 Sum_probs=65.3
Q ss_pred cEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEec---Ccc
Q 048562 253 SVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIR---GWA 329 (464)
Q Consensus 253 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~---~~v 329 (464)
.+++.-.||.... ....+++.|.+.++.+-.+.... ..+++.....+.+. . .++.. .|+
T Consensus 7 ~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~------------A~~fi~~~~l~~l~--~-~v~~~~~~~~~ 68 (175)
T 3qjg_A 7 NVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTN------------GRKFINGEILKQFC--D-NYYDEFEDPFL 68 (175)
T ss_dssp EEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTG------------GGGGSCHHHHHHHC--S-CEECTTTCTTC
T ss_pred EEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcC------------HHHHhhHHHHHHhc--C-CEEecCCCCcc
Confidence 3777777777643 35567778877787766665443 22334333333332 2 33321 345
Q ss_pred cHHHHhcccCceeeccccchhhHHH-------------HHHcCCceeeccc-------ccccchhHHHHHhhhcc
Q 048562 330 PQLLILEHTAVGGFMTHCGWNSTLE-------------SVSAGVPMVTWPI-------TAEQFSNEKLISDVLKI 384 (464)
Q Consensus 330 pq~~lL~~~~~~~~ItHGG~~s~~E-------------al~~GvP~v~~P~-------~~DQ~~na~~v~~~~G~ 384 (464)
++.++-..+++ .+|.-+-.||+.- ++..++|++++|- +.=-..|..++ .+.|+
T Consensus 69 ~hi~l~~~aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L-~~~G~ 141 (175)
T 3qjg_A 69 NHVDIANKHDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLL-KDYGV 141 (175)
T ss_dssp CHHHHHHTCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHH-HHTTC
T ss_pred ccccccchhCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHH-HHCCC
Confidence 56665555555 5666666665433 4677999999993 22224677778 47775
No 426
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=21.58 E-value=3.5e+02 Score=22.51 Aligned_cols=142 Identities=11% Similarity=0.094 Sum_probs=75.8
Q ss_pred CcEEEEecCCCCCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCcccH
Q 048562 252 NSVLYISFGSLARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAPQ 331 (464)
Q Consensus 252 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vpq 331 (464)
+|.|-|-+||.. +....++....|+.++..+-..+..- ++ +|+.+.+ |+..
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HR--------~p~~~~~-------------~~~~ 56 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA------HR--------TPKETVE-------------FVEN 56 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TT--------SHHHHHH-------------HHHH
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc------cC--------CHHHHHH-------------HHHH
Confidence 346777788876 56677888888888888766655443 21 4432221 1111
Q ss_pred HHHhcccCceeeccccch----hhHHHHHHcCCceeecccccc---cchhHHHHHhh--hcceEEe-ccccccCCCCCCC
Q 048562 332 LLILEHTAVGGFMTHCGW----NSTLESVSAGVPMVTWPITAE---QFSNEKLISDV--LKIGVKV-GSVNWVSWSTEPS 401 (464)
Q Consensus 332 ~~lL~~~~~~~~ItHGG~----~s~~Eal~~GvP~v~~P~~~D---Q~~na~~v~~~--~G~G~~l-~~~~~~~~~~~~~ 401 (464)
. ..-.+++||.=+|. .++.-++ .-+|+|.+|...- -.+-..-++ + .|+.+.. ... +.
T Consensus 57 a---~~~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~v-qmp~GvPVatV~I~--------~a 123 (169)
T 3trh_A 57 A---DNRGCAVFIAAAGLAAHLAGTIAAH-TLKPVIGVPMAGGSLGGLDALLSTV-QMPGGVPVACTAIG--------KA 123 (169)
T ss_dssp H---HHTTEEEEEEEECSSCCHHHHHHHT-CSSCEEEEECCCSTTTTHHHHHHHH-CCCTTSCCEECCST--------HH
T ss_pred H---HhCCCcEEEEECChhhhhHHHHHhc-CCCCEEEeecCCCCCCCHHHHHHhh-cCCCCCceEEEecC--------Cc
Confidence 1 11223347776664 3444443 3689999998532 222223332 3 3432111 110 00
Q ss_pred CccChHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 048562 402 AAVGRDKVEVAVKRLMGTGEEAAEMRRRAGELGEKAKNA 440 (464)
Q Consensus 402 ~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~ 440 (464)
+..++.-+...|-.+ .|+ .++++.+.++++.++.
T Consensus 124 ~~~nAa~lAa~Il~~-~d~----~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 124 GAKNAAILAAQIIAL-QDK----SIAQKLVQQRTAKRET 157 (169)
T ss_dssp HHHHHHHHHHHHHHT-TCH----HHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHcC-CCH----HHHHHHHHHHHHHHHH
Confidence 123455555554433 445 7889998888888753
No 427
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=21.58 E-value=1.1e+02 Score=30.13 Aligned_cols=42 Identities=21% Similarity=0.389 Sum_probs=35.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCCcchh
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSPKHAL 48 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~ 48 (464)
+..|+++..++.|-..-+..||..|+++|++|.++..+.+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 445667777799999999999999999999999999876654
No 428
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=21.52 E-value=1.9e+02 Score=24.45 Aligned_cols=95 Identities=7% Similarity=0.093 Sum_probs=60.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCcEEEEeCCcchhhhhh-hhhhccCCCCCeEEEEecCCCCCCCCCCCCcc
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAH--GAKSTIITSPKHALSFQK-SINRNQQSGLPITIKTLHLPDDIEIPDTDMSA 84 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (464)
.+|+++.. ...=.-++.+|+.|.+. ||++. ++......+.. . | +....+. ...
T Consensus 28 g~V~lsv~--D~dK~~lv~~ak~~~~lL~Gf~L~--AT~gTa~~L~e~~-------G--l~v~~v~----------k~~- 83 (178)
T 1vmd_A 28 KRIALIAH--DRRKRDLLEWVSFNLGTLSKHELY--ATGTTGALLQEKL-------G--LKVHRLK----------SGP- 83 (178)
T ss_dssp CEEEEEEC--GGGHHHHHHHHHHSHHHHTTSEEE--ECHHHHHHHHHHH-------C--CCCEECS----------CGG-
T ss_pred CEEEEEEe--hhhHHHHHHHHHHHHHHhcCCEEE--EchHHHHHHHHHh-------C--ceeEEEe----------ecC-
Confidence 44555543 34446789999999999 99743 44444455555 4 3 3333321 000
Q ss_pred cHHHHHhhhHHHHHHhhhhCCCCEEEeCCC--c--------hhhHHHHHHcCCCeEEE
Q 048562 85 TPRTDTSMLQEPLKSLLVDSRPDCIVHDMF--H--------HWSADVINSMNIPRIVF 132 (464)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~--~--------~~~~~~A~~~giP~v~~ 132 (464)
+.-.+++.+++++.+.|+||.-.- . .....+|-..+||+++.
T Consensus 84 ------eGG~pqI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tn 135 (178)
T 1vmd_A 84 ------LGGDQQIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAIT 135 (178)
T ss_dssp ------GTHHHHHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESS
T ss_pred ------CCCCchHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeC
Confidence 002567889999999999998544 1 13667888999999975
No 429
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=21.51 E-value=4.4e+02 Score=23.59 Aligned_cols=34 Identities=21% Similarity=0.099 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
-|+++++.++.| --..+|+.|+++|++|.++...
T Consensus 28 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 28 GKVAFITGAARG---QGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEecc
Confidence 356666665543 3467899999999999987543
No 430
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=21.39 E-value=1.1e+02 Score=23.40 Aligned_cols=38 Identities=5% Similarity=-0.027 Sum_probs=24.7
Q ss_pred HHHHhhhh-CCCCEEEeCCCch--hhHHHHHHc-----CCCeEEEe
Q 048562 96 PLKSLLVD-SRPDCIVHDMFHH--WSADVINSM-----NIPRIVFN 133 (464)
Q Consensus 96 ~l~~~l~~-~~pD~Vi~D~~~~--~~~~~A~~~-----giP~v~~~ 133 (464)
...+.+++ .+||+||.|.... .+..+.+.+ ++|.|.++
T Consensus 50 ~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls 95 (138)
T 2b4a_A 50 AFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILT 95 (138)
T ss_dssp HHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEE
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE
Confidence 33456666 7899999997654 344454443 46777764
No 431
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=21.37 E-value=72 Score=31.87 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=27.9
Q ss_pred HHHHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEE
Q 048562 95 EPLKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVF 132 (464)
Q Consensus 95 ~~l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~ 132 (464)
..+.+++++.+||++|... ....+|+++|||++.+
T Consensus 407 ~el~~~i~~~~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 407 YEFEEFVKRIKPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHHHCCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHHHhcCCcEEEeCc---chhHHHHHcCCCEEec
Confidence 4566777888999999963 3567899999999964
No 432
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=21.36 E-value=1.1e+02 Score=28.15 Aligned_cols=38 Identities=3% Similarity=-0.179 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGG-H---QIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~G-H---~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
++||+++..+-.+ | +.....++++|.++||+|..+...
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678888775222 2 346788999999999999998754
No 433
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=21.29 E-value=88 Score=26.00 Aligned_cols=29 Identities=24% Similarity=0.272 Sum_probs=23.6
Q ss_pred EEEEecCCCCCCCHHhHHHHHHHHhhCCC
Q 048562 254 VLYISFGSLARLSPEQLLEIAYGLEASNH 282 (464)
Q Consensus 254 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~ 282 (464)
.+|+++||....+.+.+...+.++++.+.
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~ 31 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLSN 31 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCCC
Confidence 58999999997777778888888887644
No 434
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=21.29 E-value=53 Score=29.12 Aligned_cols=35 Identities=20% Similarity=0.090 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
..++||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 17 ~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 356889999666444 46799999999999988654
No 435
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=21.29 E-value=39 Score=30.52 Aligned_cols=51 Identities=20% Similarity=0.262 Sum_probs=36.4
Q ss_pred eeeccccchhhHHHHHHc---CCceeecccccccchhHHHHHhhhcceEEeccccccCCCCCCCCccChHHHHHHHHHHh
Q 048562 341 GGFMTHCGWNSTLESVSA---GVPMVTWPITAEQFSNEKLISDVLKIGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLM 417 (464)
Q Consensus 341 ~~~ItHGG~~s~~Eal~~---GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il 417 (464)
+++|+=||=||+.+++.. ++|+++++.. .+ ... ..+.++++.++++.++
T Consensus 43 D~vv~~GGDGTll~~a~~~~~~~PilGIn~G------------~~------Gfl----------~~~~~~~~~~al~~i~ 94 (258)
T 1yt5_A 43 DLIVVVGGDGTVLKAAKKAADGTPMVGFKAG------------RL------GFL----------TSYTLDEIDRFLEDLR 94 (258)
T ss_dssp SEEEEEECHHHHHHHHTTBCTTCEEEEEESS------------SC------CSS----------CCBCGGGHHHHHHHHH
T ss_pred CEEEEEeCcHHHHHHHHHhCCCCCEEEEECC------------CC------Ccc----------CcCCHHHHHHHHHHHH
Confidence 449999999999999876 8898888521 11 111 1345777888888887
Q ss_pred cC
Q 048562 418 GT 419 (464)
Q Consensus 418 ~~ 419 (464)
++
T Consensus 95 ~g 96 (258)
T 1yt5_A 95 NW 96 (258)
T ss_dssp TT
T ss_pred cC
Confidence 64
No 436
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=21.29 E-value=87 Score=28.43 Aligned_cols=42 Identities=12% Similarity=0.187 Sum_probs=28.9
Q ss_pred hhhHHHHHHhhhhCCCCEEEeCCCc---------h-hhHHHHHHcCCCeEEE
Q 048562 91 SMLQEPLKSLLVDSRPDCIVHDMFH---------H-WSADVINSMNIPRIVF 132 (464)
Q Consensus 91 ~~~~~~l~~~l~~~~pD~Vi~D~~~---------~-~~~~~A~~~giP~v~~ 132 (464)
..+...+.++|++.+||+||+-... . .+..+++..|+|.+.+
T Consensus 134 ~~l~~~l~~~ir~~~PdvV~t~~~~d~HpDH~~~~~a~~~A~~~~~~~~~~~ 185 (273)
T 3dff_A 134 GEVADDIRSIIDEFDPTLVVTCAAIGEHPDHEATRDAALFATHEKNVPVRLW 185 (273)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTCCHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCChHHHHHHHHHHHHHHHcCCCEEEe
Confidence 4567888899999999999985321 1 2334556678876654
No 437
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=21.29 E-value=83 Score=27.81 Aligned_cols=35 Identities=11% Similarity=0.159 Sum_probs=23.9
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHHcCCCeEEEe
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINSMNIPRIVFN 133 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~~giP~v~~~ 133 (464)
+.|.+.+||+||...... ....-.+..|||++.+.
T Consensus 53 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 53 EGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp HHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 445568999999875432 23444567899998873
No 438
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=21.24 E-value=1.6e+02 Score=25.40 Aligned_cols=40 Identities=13% Similarity=0.077 Sum_probs=25.2
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|.+..+..++++. .+ .|- --..+++.|+++|++|.++...
T Consensus 1 M~~~l~~k~vlIT-Ga-sgg--iG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 1 MELFLAGRRVLVT-GA-GKG--IGRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp CCCCCTTCEEEEE-ST-TSH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CccccCCcEEEEE-CC-CcH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 5544444455444 32 232 3467889999999999887654
No 439
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=21.08 E-value=80 Score=24.58 Aligned_cols=40 Identities=8% Similarity=-0.013 Sum_probs=24.6
Q ss_pred HHHHhhhh-CCCCEEEeCCCch--hhHHHHHH-----cCCCeEEEecc
Q 048562 96 PLKSLLVD-SRPDCIVHDMFHH--WSADVINS-----MNIPRIVFNGN 135 (464)
Q Consensus 96 ~l~~~l~~-~~pD~Vi~D~~~~--~~~~~A~~-----~giP~v~~~~~ 135 (464)
.+..+.+. ..||+||.|.... .+..+++. -++|.|.++..
T Consensus 57 ~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~ 104 (146)
T 4dad_A 57 QIVQRTDGLDAFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTD 104 (146)
T ss_dssp HHTTCHHHHTTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHhcCCCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCC
Confidence 44444445 8899999997654 23334332 25787777654
No 440
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=21.07 E-value=41 Score=31.23 Aligned_cols=32 Identities=9% Similarity=0.141 Sum_probs=0.0
Q ss_pred HHhcccCceeeccccchhhHHHHHHc----CCceeecc
Q 048562 333 LILEHTAVGGFMTHCGWNSTLESVSA----GVPMVTWP 366 (464)
Q Consensus 333 ~lL~~~~~~~~ItHGG~~s~~Eal~~----GvP~v~~P 366 (464)
.....+++ +|.-||=||+.+++.. ++|+++++
T Consensus 71 ~~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~ 106 (307)
T 1u0t_A 71 HAADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVN 106 (307)
T ss_dssp -----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ccccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEe
No 441
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=21.02 E-value=93 Score=26.01 Aligned_cols=37 Identities=16% Similarity=0.332 Sum_probs=28.4
Q ss_pred cEEEEEcCCC--cc-CHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVG--GG-HQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~--~G-H~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
.+|+++|.-+ .. -.++...|++.|.++|.+|.|+..+
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 5677777431 11 2458999999999999999999887
No 442
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=20.97 E-value=1.1e+02 Score=27.18 Aligned_cols=33 Identities=12% Similarity=-0.010 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+++++.++.| --..+|+.|+++|++|.+....
T Consensus 9 k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 9 KKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 55666655443 3467899999999999887654
No 443
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=20.93 E-value=1.4e+02 Score=27.24 Aligned_cols=37 Identities=5% Similarity=-0.038 Sum_probs=23.2
Q ss_pred CCCcEEEEE-cCCCccCHHHH--HHHHHHHHhCCCcEEEE
Q 048562 5 SSPVEMFFF-PYVGGGHQIPM--VDIARIFAAHGAKSTII 41 (464)
Q Consensus 5 ~~~~~vl~~-~~~~~GH~~p~--l~la~~L~~rGh~Vt~~ 41 (464)
|++||||++ ..|-...++-. -.+.+.|.++||+|+++
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~ 59 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVS 59 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEE
Confidence 556677555 45544444432 34677888999999986
No 444
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=20.90 E-value=1e+02 Score=26.31 Aligned_cols=21 Identities=5% Similarity=0.004 Sum_probs=17.5
Q ss_pred HHHHHHHHH-hCCCcEEEEeCC
Q 048562 24 MVDIARIFA-AHGAKSTIITSP 44 (464)
Q Consensus 24 ~l~la~~L~-~rGh~Vt~~~~~ 44 (464)
-..+++.|. ++||+|+.++-.
T Consensus 18 G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 18 AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp HHHHHHHHHHHCCCEEEEEESS
T ss_pred HHHHHHHHHhcCCceEEEEecC
Confidence 467899999 899999988764
No 445
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=20.87 E-value=2.1e+02 Score=25.04 Aligned_cols=35 Identities=11% Similarity=0.134 Sum_probs=27.2
Q ss_pred HHHhhhhCCCCEEEeCCCchhhHHHHHHcCCCeEEEec
Q 048562 97 LKSLLVDSRPDCIVHDMFHHWSADVINSMNIPRIVFNG 134 (464)
Q Consensus 97 l~~~l~~~~pD~Vi~D~~~~~~~~~A~~~giP~v~~~~ 134 (464)
..+.+++..+|+||.|.. .+.+|+++|+|.+.+.+
T Consensus 146 ~i~~l~~~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 146 QINELKANGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHTTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHCCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 334556688999999833 57789999999999873
No 446
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=20.86 E-value=99 Score=25.93 Aligned_cols=36 Identities=17% Similarity=0.288 Sum_probs=23.9
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHHc-----CCCeEEEec
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINSM-----NIPRIVFNG 134 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~~-----giP~v~~~~ 134 (464)
+.+.+.+||+||.|...+ .+..+++.+ ++|.|.++.
T Consensus 42 ~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~ 84 (208)
T 1yio_A 42 EHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITA 84 (208)
T ss_dssp HHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEES
T ss_pred HhhhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeC
Confidence 456677899999997654 344444432 578887754
No 447
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=20.83 E-value=1.2e+02 Score=26.19 Aligned_cols=35 Identities=11% Similarity=0.068 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|.|.++++.+ .|- --..+++.|.++||+|+++...
T Consensus 4 ~~k~vlVtGa-sgg--iG~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 4 MKGAVLITGA-SRG--IGEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp CCCEEEESST-TSH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECC-CcH--HHHHHHHHHHHCCCEEEEEECC
Confidence 3345555543 333 3467899999999999887654
No 448
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=20.82 E-value=4.4e+02 Score=23.29 Aligned_cols=106 Identities=8% Similarity=0.077 Sum_probs=58.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEeCC---cchhhhhhhhhhccCCCCCeEEEEecCCCCCCCCCCCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAH-GAKSTIITSP---KHALSFQKSINRNQQSGLPITIKTLHLPDDIEIPDTDM 82 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (464)
+.|||+..-++ .+-...+..|..|+++ |.+++++.-. ...+.+..........|..+......
T Consensus 7 ~~~ILv~~D~s-~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------------ 73 (290)
T 3mt0_A 7 IRSILVVIEPD-QLEGLALKRAQLIAGVTQSHLHLLVCEKRRDHSAALNDLAQELREEGYSVSTNQAW------------ 73 (290)
T ss_dssp CCEEEEECCSS-CSCCHHHHHHHHHHHHHCCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEEC------------
T ss_pred hceEEEEeCCC-ccchHHHHHHHHHHHhcCCeEEEEEeeCcHHHHHHHHHHHHHHhhCCCeEEEEEEe------------
Confidence 45666665543 4445677788878765 8888877532 22222222211111122233222210
Q ss_pred cccHHHHHhhhHHHHHHhhhhCCCCEEEeCCCc----------hhhHHHHHHcCCCeEEE
Q 048562 83 SATPRTDTSMLQEPLKSLLVDSRPDCIVHDMFH----------HWSADVINSMNIPRIVF 132 (464)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~D~~~----------~~~~~~A~~~giP~v~~ 132 (464)
. ......+.+..++...|+||..... .....+.+..++|++.+
T Consensus 74 ~-------g~~~~~i~~~a~~~~~dliV~G~~~~~~~~~~~~gs~~~~vl~~~~~PVlvv 126 (290)
T 3mt0_A 74 K-------DSLHQTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRFAPCPVLMT 126 (290)
T ss_dssp S-------SSHHHHHHHHHHHHTCSEEEEECCCSCTTSTTSCCHHHHHHHHHCSSCEEEE
T ss_pred C-------CCHHHHHHHHHHhcCCCEEEEecccCCchhhcccCHHHHHHHhcCCCCEEEe
Confidence 0 0124455666677889999986431 23456788889998887
No 449
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=20.79 E-value=85 Score=28.42 Aligned_cols=33 Identities=15% Similarity=0.104 Sum_probs=25.5
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPY-VGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~-~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+||.|+.. |..| ..+|+.|.++||+|+++...
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECCS
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 468999877 6555 46788999999999977543
No 450
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=20.78 E-value=1.5e+02 Score=27.13 Aligned_cols=36 Identities=11% Similarity=0.098 Sum_probs=24.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
++.++||+.. +.|.+ -..|++.|.++||+|+.+.-.
T Consensus 9 ~~~~~vlVTG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTG--ANGFV--ASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEEC--CccHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 3456666653 44444 356789999999999987654
No 451
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=20.72 E-value=1.6e+02 Score=24.67 Aligned_cols=39 Identities=10% Similarity=0.140 Sum_probs=25.6
Q ss_pred CCcEEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEeCCc
Q 048562 6 SPVEMFFFPY-VGGGHQIPMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 6 ~~~~vl~~~~-~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
++.|++++-. .+.=. .=++.-.+.|.+.|++|++++...
T Consensus 6 ~t~~~v~il~~~gFe~-~E~~~p~~~l~~ag~~V~~~s~~~ 45 (177)
T 4hcj_A 6 KTNNILYVMSGQNFQD-EEYFESKKIFESAGYKTKVSSTFI 45 (177)
T ss_dssp CCCEEEEECCSEEECH-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCCEEEEECCCCccH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 3455555443 33333 335667788999999999998754
No 452
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=20.70 E-value=4.1e+02 Score=22.95 Aligned_cols=91 Identities=8% Similarity=-0.040 Sum_probs=0.0
Q ss_pred CcEEEEecCCC-CCCCHHhHHHHHHHHhhCCCceEEEEccCCCCCCCCcCCcccccCCchhHHHhhcCCCCcEEecCccc
Q 048562 252 NSVLYISFGSL-ARLSPEQLLEIAYGLEASNHSFIWVVGKIFQSPGTRKENGIEENWLPSGFEERMGESKRGLIIRGWAP 330 (464)
Q Consensus 252 ~~~V~vs~GS~-~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~nv~v~~~vp 330 (464)
++..+||.|.. . ......++..+.+-++|=++... +......... ...+.+....+
T Consensus 44 ~G~~vVsGGg~~G-----iM~aa~~gAl~~GG~tiGVlP~~----------------~~~~e~~~~~--~~~~~~~~~f~ 100 (215)
T 2a33_A 44 RNIDLVYGGGSIG-----LMGLVSQAVHDGGRHVIGIIPKT----------------LMPRELTGET--VGEVRAVADMH 100 (215)
T ss_dssp TTCEEEECCCSSH-----HHHHHHHHHHHTTCCEEEEEESS----------------CC----------CCEEEEESSHH
T ss_pred CCCEEEECCChhh-----HhHHHHHHHHHcCCcEEEEcchH----------------hcchhhccCC--CCceeecCCHH
Q ss_pred -HHHHhcccCceeeccccchhhHHHHHHc---------CCceeec
Q 048562 331 -QLLILEHTAVGGFMTHCGWNSTLESVSA---------GVPMVTW 365 (464)
Q Consensus 331 -q~~lL~~~~~~~~ItHGG~~s~~Eal~~---------GvP~v~~ 365 (464)
...++..-+...++--||.||+-|.... ++|++.+
T Consensus 101 ~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll 145 (215)
T 2a33_A 101 QRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLL 145 (215)
T ss_dssp HHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEE
T ss_pred HHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEe
No 453
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=20.66 E-value=3.2e+02 Score=24.69 Aligned_cols=41 Identities=5% Similarity=0.031 Sum_probs=33.6
Q ss_pred HHHHHHhhhhCCCCEEEeCCCch--hhHHHHHHcCCCeEEEec
Q 048562 94 QEPLKSLLVDSRPDCIVHDMFHH--WSADVINSMNIPRIVFNG 134 (464)
Q Consensus 94 ~~~l~~~l~~~~pD~Vi~D~~~~--~~~~~A~~~giP~v~~~~ 134 (464)
...+.+.+++.+..+|+++..+. .+-.+|+..|++.+.+.+
T Consensus 217 l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 217 LKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp HHHHHHHHHHTTCCEEEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 56677888899999999998776 466789999999987643
No 454
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=20.59 E-value=95 Score=26.03 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=28.4
Q ss_pred cEEEEEcCC--Ccc-CHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYV--GGG-HQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~--~~G-H~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
.+|+++|.- +.. -.++...|++.|.++|.+|.|+..+
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 467777743 112 2458999999999999999999887
No 455
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=20.58 E-value=1.2e+02 Score=27.86 Aligned_cols=27 Identities=11% Similarity=0.090 Sum_probs=23.0
Q ss_pred eeeccccchhhHHHHHH------cCCceeeccc
Q 048562 341 GGFMTHCGWNSTLESVS------AGVPMVTWPI 367 (464)
Q Consensus 341 ~~~ItHGG~~s~~Eal~------~GvP~v~~P~ 367 (464)
+++|.-||=||+.|++. .++|+-++|.
T Consensus 65 d~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 65 DLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp SEEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CEEEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 34999999999999864 5789999997
No 456
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=20.53 E-value=1.1e+02 Score=25.66 Aligned_cols=37 Identities=8% Similarity=-0.072 Sum_probs=28.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 8 VEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 8 ~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
..++++.++..|...-+..+++.|+++|+.|..+-..
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 4456666667777778899999999999998776543
No 457
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=20.52 E-value=1.1e+02 Score=28.60 Aligned_cols=27 Identities=15% Similarity=0.115 Sum_probs=22.6
Q ss_pred eeeccccchhhHHHHHH------cCCceeeccc
Q 048562 341 GGFMTHCGWNSTLESVS------AGVPMVTWPI 367 (464)
Q Consensus 341 ~~~ItHGG~~s~~Eal~------~GvP~v~~P~ 367 (464)
+++|.=||=||+.|++. .++|+.++|.
T Consensus 82 d~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 82 DVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp SEEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CEEEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 34999999999999853 4689999997
No 458
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=20.45 E-value=65 Score=30.43 Aligned_cols=35 Identities=6% Similarity=-0.176 Sum_probs=25.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 5 SSPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 5 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|++.+|+++-.+-. -+.+|..|+++|++|+++-..
T Consensus 9 m~~~dVvIVGaG~a-----Gl~~A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 9 GKTRRAEVAGGGFA-----GLTAAIALKQNGWDVRLHEKS 43 (379)
T ss_dssp --CCEEEEECCSHH-----HHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCeEEEECCCHH-----HHHHHHHHHHCCCCEEEEecC
Confidence 44568888876533 377889999999999998543
No 459
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=20.36 E-value=1.3e+02 Score=26.47 Aligned_cols=35 Identities=11% Similarity=-0.032 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
++|.++++.++. - --..+|+.|+++|++|.++...
T Consensus 6 ~~k~vlVTGas~-g--IG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAGTK-G--LGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTTTS-H--HHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCCCc-h--hHHHHHHHHHHCCCEEEEEcCC
Confidence 456666665443 2 3468899999999999987554
No 460
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=20.35 E-value=1.5e+02 Score=22.76 Aligned_cols=25 Identities=12% Similarity=0.145 Sum_probs=16.5
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHH
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVIN 123 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~ 123 (464)
+.+.+.+||+||.|...+ .+..+++
T Consensus 48 ~~l~~~~~dlvllD~~lp~~~g~~~~~ 74 (140)
T 3c97_A 48 QAYQNRQFDVIIMDIQMPVMDGLEAVS 74 (140)
T ss_dssp HHHHHSCCSEEEECTTCCSSCHHHHHH
T ss_pred HHHhcCCCCEEEEeCCCCCCcHHHHHH
Confidence 445567899999997654 3444443
No 461
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=20.32 E-value=1.1e+02 Score=29.91 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=26.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
+..||+|+-.+..| +.+|+.|+++||+|+..=.
T Consensus 8 ~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 46799999886544 3469999999999998754
No 462
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=20.28 E-value=1.1e+02 Score=26.29 Aligned_cols=32 Identities=13% Similarity=0.109 Sum_probs=27.0
Q ss_pred EEEEc-CCCccCHHHHHHHHHHHHhCCCcEEEE
Q 048562 10 MFFFP-YVGGGHQIPMVDIARIFAAHGAKSTII 41 (464)
Q Consensus 10 vl~~~-~~~~GH~~p~l~la~~L~~rGh~Vt~~ 41 (464)
|++.. -++-|-..-.+.||..|+++|++|.++
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 44444 368999999999999999999999986
No 463
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=20.28 E-value=70 Score=27.66 Aligned_cols=34 Identities=9% Similarity=-0.028 Sum_probs=23.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 6 SPVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 6 ~~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
.++||+|+..|..| ..+++.|.+.||+|+++...
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 45789888654333 35788899999999887653
No 464
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=20.26 E-value=2.6e+02 Score=21.63 Aligned_cols=48 Identities=10% Similarity=-0.110 Sum_probs=31.0
Q ss_pred cCCceeecccccccchhHHHHHhhhc-ceEEeccccccCCCCCCCCccChHHHHHHHHHHhcC
Q 048562 358 AGVPMVTWPITAEQFSNEKLISDVLK-IGVKVGSVNWVSWSTEPSAAVGRDKVEVAVKRLMGT 419 (464)
Q Consensus 358 ~GvP~v~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~ 419 (464)
..+|+|++--..+ ........ +.| +--.+.+ .++.++|..+|+.++..
T Consensus 78 ~~~~ii~ls~~~~-~~~~~~~~-~~g~~~~~l~k------------P~~~~~L~~~i~~~~~~ 126 (154)
T 2rjn_A 78 PDIERVVISGYAD-AQATIDAV-NRGKISRFLLK------------PWEDEDVFKVVEKGLQL 126 (154)
T ss_dssp TTSEEEEEECGGG-HHHHHHHH-HTTCCSEEEES------------SCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCC-HHHHHHHH-hccchheeeeC------------CCCHHHHHHHHHHHHHH
Confidence 4788888754444 33334442 555 5445544 47999999999999864
No 465
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=20.22 E-value=5.1e+02 Score=24.00 Aligned_cols=63 Identities=14% Similarity=0.158 Sum_probs=39.4
Q ss_pred cccHHHHhcccCceeeccccch----hhHHHHHHcCCceee-ccccc--ccchhHHHHHhhhcceEEecc
Q 048562 328 WAPQLLILEHTAVGGFMTHCGW----NSTLESVSAGVPMVT-WPITA--EQFSNEKLISDVLKIGVKVGS 390 (464)
Q Consensus 328 ~vpq~~lL~~~~~~~~ItHGG~----~s~~Eal~~GvP~v~-~P~~~--DQ~~na~~v~~~~G~G~~l~~ 390 (464)
|-...++|..+++.+++--.-. .-+.+++.+|+++++ -|+.. ++-.....++++.|+-..+..
T Consensus 54 ~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~ 123 (359)
T 3e18_A 54 YESYEAVLADEKVDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQ 123 (359)
T ss_dssp CSCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEEC
T ss_pred eCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEe
Confidence 4567888886665555433332 347788999999998 56543 444444444467777666644
No 466
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=20.22 E-value=4.3e+02 Score=22.93 Aligned_cols=44 Identities=11% Similarity=0.049 Sum_probs=21.4
Q ss_pred CCCCCCCcEEEEEcCCCc-cCHHH-HHHHHHHHHhCCCcEEEEeCC
Q 048562 1 MDSKSSPVEMFFFPYVGG-GHQIP-MVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~~~-GH~~p-~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|+...+..+|.++..... ..+.. ...+-+++.++|+++.++...
T Consensus 1 ~s~~~~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~ 46 (276)
T 3jy6_A 1 MSLTQSSKLIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDAN 46 (276)
T ss_dssp ----CCCCEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CCcCCCCcEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 454445566655544322 22222 334556666778887776543
No 467
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=20.21 E-value=1.6e+02 Score=22.14 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=21.6
Q ss_pred CCCCEEEeCCCch--hhHHHHHH-------cCCCeEEEeccc
Q 048562 104 SRPDCIVHDMFHH--WSADVINS-------MNIPRIVFNGNC 136 (464)
Q Consensus 104 ~~pD~Vi~D~~~~--~~~~~A~~-------~giP~v~~~~~~ 136 (464)
.+||+||.|.... .+..+.+. .++|.|.++...
T Consensus 54 ~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~ 95 (140)
T 1k68_A 54 SRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSI 95 (140)
T ss_dssp CCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCC
T ss_pred CCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCC
Confidence 7899999997654 33333332 357888876543
No 468
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=20.20 E-value=4.5e+02 Score=23.13 Aligned_cols=32 Identities=22% Similarity=0.150 Sum_probs=23.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeC
Q 048562 9 EMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITS 43 (464)
Q Consensus 9 ~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 43 (464)
|+++++.++.| --..+|+.|+++|++|.++.-
T Consensus 12 k~~lVTGas~G---IG~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 12 RVAFITGAARG---QGRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCccH---HHHHHHHHHHHcCCEEEEEec
Confidence 55666654432 346789999999999998754
No 469
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=20.16 E-value=4e+02 Score=22.74 Aligned_cols=44 Identities=11% Similarity=0.003 Sum_probs=28.6
Q ss_pred EEecCccc-HHHH-hcccCceeeccccchhhHHHHHH---------cCCceeeccc
Q 048562 323 LIIRGWAP-QLLI-LEHTAVGGFMTHCGWNSTLESVS---------AGVPMVTWPI 367 (464)
Q Consensus 323 v~v~~~vp-q~~l-L~~~~~~~~ItHGG~~s~~Eal~---------~GvP~v~~P~ 367 (464)
+.+++... ...+ +.+++. .++--||.||+-|... +++|++.+-.
T Consensus 101 ~i~~~~~~~Rk~~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 101 LIVTDTMRERKREMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred eEEcCCHHHHHHHHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 44455554 3333 344554 6778899999988742 6899998853
No 470
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=20.11 E-value=95 Score=27.35 Aligned_cols=35 Identities=9% Similarity=0.058 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 048562 7 PVEMFFFPYVGGGHQIPMVDIARIFAAHGAKSTIITSP 44 (464)
Q Consensus 7 ~~~vl~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 44 (464)
|.|.++++.++.| --..||+.|+++|++|.++.-.
T Consensus 21 m~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 21 MSKNILVLGGSGA---LGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp -CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 5566667665432 3468899999999999887654
No 471
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=20.10 E-value=1.4e+02 Score=27.41 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=27.8
Q ss_pred CCCCCCCcEEEEEcCC--CccCHH-HHHHHHHHHHhCCCcEEEEeCCc
Q 048562 1 MDSKSSPVEMFFFPYV--GGGHQI-PMVDIARIFAAHGAKSTIITSPK 45 (464)
Q Consensus 1 m~~~~~~~~vl~~~~~--~~GH~~-p~l~la~~L~~rGh~Vt~~~~~~ 45 (464)
|. +.+|+|++++..| +.|... -.-.+...|.++|+++.+..+..
T Consensus 3 m~-~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~ 49 (304)
T 3s40_A 3 MT-KTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE 49 (304)
T ss_dssp ---CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS
T ss_pred Cc-cCCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC
Confidence 44 3446677666666 455532 34567788889999998886543
No 472
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=20.06 E-value=1.4e+02 Score=21.58 Aligned_cols=37 Identities=16% Similarity=0.102 Sum_probs=22.7
Q ss_pred HhhhhCCCCEEEeCCCch--hhHHHHHH-------cCCCeEEEecc
Q 048562 99 SLLVDSRPDCIVHDMFHH--WSADVINS-------MNIPRIVFNGN 135 (464)
Q Consensus 99 ~~l~~~~pD~Vi~D~~~~--~~~~~A~~-------~giP~v~~~~~ 135 (464)
+.+.+.+||+||.|.... .+..+.+. .++|+|.++..
T Consensus 39 ~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~ 84 (119)
T 2j48_A 39 DQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGE 84 (119)
T ss_dssp HHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESS
T ss_pred HHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCC
Confidence 444556899999997543 23333322 36788887654
No 473
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=20.06 E-value=99 Score=23.14 Aligned_cols=38 Identities=18% Similarity=0.290 Sum_probs=24.3
Q ss_pred HHhhhhCCCCEEEeCCCch--hhHHHHHH-------cCCCeEEEecc
Q 048562 98 KSLLVDSRPDCIVHDMFHH--WSADVINS-------MNIPRIVFNGN 135 (464)
Q Consensus 98 ~~~l~~~~pD~Vi~D~~~~--~~~~~A~~-------~giP~v~~~~~ 135 (464)
.+.+.+.+||+||.|...+ .+..+.+. -++|.|.++..
T Consensus 39 ~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (127)
T 2jba_A 39 VNQLNEPWPDLILLAWMLPGGSGIQFIKHLRRESMTRDIPVVMLTAR 85 (127)
T ss_dssp HTTCSSSCCSEEEEESEETTEEHHHHHHHHHTSTTTTTSCEEEEEET
T ss_pred HHHHhccCCCEEEEecCCCCCCHHHHHHHHHhCcccCCCCEEEEeCC
Confidence 3556667899999997654 24433332 25788877654
No 474
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=20.05 E-value=5e+02 Score=23.62 Aligned_cols=64 Identities=14% Similarity=0.013 Sum_probs=39.1
Q ss_pred cccHHHHhcccCceeecc--cc--chhhHHHHHHcCCceee-ccccc--ccchhHHHHHhhhcceEEeccc
Q 048562 328 WAPQLLILEHTAVGGFMT--HC--GWNSTLESVSAGVPMVT-WPITA--EQFSNEKLISDVLKIGVKVGSV 391 (464)
Q Consensus 328 ~vpq~~lL~~~~~~~~It--HG--G~~s~~Eal~~GvP~v~-~P~~~--DQ~~na~~v~~~~G~G~~l~~~ 391 (464)
+-...++|..+++.+++- .- -..-+.+++.+|+++++ -|+.. ++-.....++++.|+-..+...
T Consensus 52 ~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~ 122 (331)
T 4hkt_A 52 VRTIDAIEAAADIDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFN 122 (331)
T ss_dssp ECCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCG
T ss_pred cCCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEccc
Confidence 556778887555544442 11 23457789999999988 56543 4443333333677877777553
No 475
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=20.02 E-value=3.8e+02 Score=24.57 Aligned_cols=63 Identities=10% Similarity=0.104 Sum_probs=40.1
Q ss_pred cccHHHHhcccCceeeccccchh----hHHHHHHcCCceee-cccccc--cchhHHHHHhhhcce--EEecc
Q 048562 328 WAPQLLILEHTAVGGFMTHCGWN----STLESVSAGVPMVT-WPITAE--QFSNEKLISDVLKIG--VKVGS 390 (464)
Q Consensus 328 ~vpq~~lL~~~~~~~~ItHGG~~----s~~Eal~~GvP~v~-~P~~~D--Q~~na~~v~~~~G~G--~~l~~ 390 (464)
|-...++|..+++.+++----.. -+.+|+.+|+++++ -|+..+ +-.-...++++.|+- ..+..
T Consensus 56 ~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~ 127 (337)
T 3ip3_A 56 YNNWWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNEVFFTAMF 127 (337)
T ss_dssp CSSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTTCCEEECC
T ss_pred cCCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEecc
Confidence 55778888876665554433333 37889999999988 687653 444444443677765 55543
Done!