Query         048567
Match_columns 352
No_of_seqs    118 out of 1208
Neff          9.5 
Searched_HMMs 46136
Date          Fri Mar 29 10:43:33 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048567.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048567hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.2E-53 2.7E-58  405.9  32.8  301   36-352    22-326 (489)
  2 PLN02971 tryptophan N-hydroxyl 100.0 1.4E-45   3E-50  361.1  33.5  307   37-352    54-367 (543)
  3 PLN03234 cytochrome P450 83B1; 100.0 3.4E-45 7.3E-50  355.8  32.4  322   17-352     5-328 (499)
  4 PLN03112 cytochrome P450 famil 100.0 1.1E-44 2.3E-49  353.5  34.0  329   16-352     8-336 (514)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 8.1E-45 1.8E-49  354.2  32.9  304   37-352    31-337 (517)
  6 PLN00110 flavonoid 3',5'-hydro 100.0 5.8E-44 1.3E-48  346.6  33.3  310   29-352    20-329 (504)
  7 PLN02183 ferulate 5-hydroxylas 100.0 5.1E-44 1.1E-48  348.5  31.9  320   14-352    13-344 (516)
  8 PLN02966 cytochrome P450 83A1  100.0 4.8E-43   1E-47  340.7  32.6  305   34-352    23-329 (502)
  9 KOG0158 Cytochrome P450 CYP3/C 100.0 2.4E-43 5.3E-48  331.6  26.7  307   25-352    16-334 (499)
 10 PLN00168 Cytochrome P450; Prov 100.0 3.2E-42   7E-47  336.0  31.9  306   35-352    30-346 (519)
 11 PLN02394 trans-cinnamate 4-mon 100.0 7.8E-42 1.7E-46  332.5  32.2  305   35-352    25-333 (503)
 12 PTZ00404 cytochrome P450; Prov 100.0 7.1E-42 1.5E-46  331.1  30.6  299   36-352    25-323 (482)
 13 PLN02655 ent-kaurene oxidase   100.0 6.4E-42 1.4E-46  329.8  28.5  297   44-352     1-302 (466)
 14 PLN02290 cytokinin trans-hydro 100.0 1.6E-41 3.5E-46  331.2  26.9  296   38-352    40-356 (516)
 15 PLN03018 homomethionine N-hydr 100.0 7.3E-40 1.6E-44  319.2  33.6  304   43-352    41-354 (534)
 16 PLN02500 cytochrome P450 90B1  100.0 7.4E-40 1.6E-44  317.5  27.6  282   34-352    32-319 (490)
 17 KOG0157 Cytochrome P450 CYP4/C 100.0 2.6E-39 5.7E-44  312.4  24.6  292   38-352    33-331 (497)
 18 PLN02169 fatty acid (omega-1)- 100.0 2.4E-38 5.2E-43  306.9  25.3  302   34-352    26-341 (500)
 19 PLN02196 abscisic acid 8'-hydr 100.0   7E-38 1.5E-42  301.4  26.3  298   11-352     3-304 (463)
 20 PLN02774 brassinosteroid-6-oxi 100.0 7.3E-38 1.6E-42  301.4  25.4  293   20-352    10-304 (463)
 21 PLN03195 fatty acid omega-hydr 100.0 1.1E-37 2.4E-42  304.1  25.9  298   36-352    27-332 (516)
 22 PF00067 p450:  Cytochrome P450 100.0 7.3E-39 1.6E-43  306.5  16.7  294   44-352     1-302 (463)
 23 KOG0159 Cytochrome P450 CYP11/ 100.0 3.8E-37 8.3E-42  284.3  24.9  296   43-352    51-356 (519)
 24 PLN03141 3-epi-6-deoxocathaste 100.0 3.6E-36 7.8E-41  288.9  25.0  281   37-352     4-291 (452)
 25 PLN02738 carotene beta-ring hy 100.0 5.3E-36 1.2E-40  295.8  26.1  283   53-352   142-431 (633)
 26 PLN02302 ent-kaurenoic acid ox 100.0 2.7E-35 5.8E-40  285.9  30.0  281   37-352    39-327 (490)
 27 PLN02987 Cytochrome P450, fami 100.0 1.3E-35 2.8E-40  285.5  26.7  284   29-352    19-307 (472)
 28 PLN02936 epsilon-ring hydroxyl 100.0   5E-35 1.1E-39  283.4  25.4  290   43-352    13-318 (489)
 29 PLN02426 cytochrome P450, fami 100.0 2.2E-30 4.8E-35  251.1  26.5  278   49-352    48-333 (502)
 30 PLN02648 allene oxide synthase  99.9   2E-26 4.2E-31  221.1  16.9  263   43-352    18-313 (480)
 31 COG2124 CypX Cytochrome P450 [  99.9 1.6E-24 3.5E-29  205.0  22.7  248   64-352    25-276 (411)
 32 KOG0684 Cytochrome P450 [Secon  99.9 3.5E-24 7.6E-29  194.3  21.9  278   43-352    32-313 (486)
 33 KOG0114 Predicted RNA-binding   79.3     8.6 0.00019   28.6   5.9   58   43-102    13-76  (124)
 34 PF05393 Hum_adeno_E3A:  Human   64.6      13 0.00027   26.6   3.8    8   47-54     64-71  (94)
 35 PF13893 RRM_5:  RNA recognitio  59.5      28 0.00062   22.1   4.8   35   68-102     2-40  (56)
 36 PF05952 ComX:  Bacillus compet  53.4      13 0.00028   24.4   2.1   17  335-351     5-21  (57)
 37 PF00076 RRM_1:  RNA recognitio  46.9      70  0.0015   20.9   5.3   49   52-102     2-58  (70)
 38 PLN03120 nucleic acid binding   46.7      79  0.0017   28.0   6.6   58   52-111     8-71  (260)
 39 PF03908 Sec20:  Sec20;  InterP  44.8      24 0.00051   25.7   2.7   21   10-30     69-89  (92)
 40 TIGR01661 ELAV_HUD_SF ELAV/HuD  44.0      55  0.0012   30.1   5.8   59   51-111   272-340 (352)
 41 PF14483 Cut8_M:  Cut8 dimerisa  43.2      47   0.001   19.8   3.3   13  339-351    23-35  (38)
 42 PHA02902 putative IMV membrane  42.2      55  0.0012   21.9   3.8    7   45-51     33-39  (70)
 43 PLN03134 glycine-rich RNA-bind  39.9   1E+02  0.0022   24.5   5.9   58   51-110    37-104 (144)
 44 PF13625 Helicase_C_3:  Helicas  39.6      48   0.001   25.7   3.9   39   63-103    76-114 (129)
 45 PF11395 DUF2873:  Protein of u  39.6      59  0.0013   19.0   3.2   18   13-30     13-30  (43)
 46 PF12273 RCR:  Chitin synthesis  39.4      15 0.00032   28.7   1.0   13   14-26      4-16  (130)
 47 PF15330 SIT:  SHP2-interacting  34.8      89  0.0019   23.5   4.5   11   49-59     45-55  (107)
 48 PF12554 MOZART1:  Mitotic-spin  34.7   1E+02  0.0022   19.4   4.0   40  312-351     6-45  (48)
 49 smart00362 RRM_2 RNA recogniti  31.3 1.4E+02  0.0031   18.9   5.8   39   64-102    13-58  (72)
 50 TIGR03063 srtB_target sortase   30.4   1E+02  0.0023   17.1   3.2   18    6-23      1-19  (29)
 51 PF03464 eRF1_2:  eRF1 domain 2  28.9      53  0.0011   25.6   2.6   30  322-351   104-133 (133)
 52 PF15106 TMEM156:  TMEM156 prot  28.2      79  0.0017   26.8   3.5   30    3-32    166-196 (226)
 53 PF14259 RRM_6:  RNA recognitio  28.1      94   0.002   20.5   3.5   41   64-104    12-60  (70)
 54 PF15206 FAM209:  FAM209 family  28.0      39 0.00084   26.5   1.6   12   43-54     67-78  (150)
 55 PF14316 DUF4381:  Domain of un  24.4 1.2E+02  0.0026   24.1   3.9   28    3-30      7-39  (146)
 56 cd01646 RT_Bac_retron_I RT_Bac  23.6      88  0.0019   25.0   3.1   57   37-101    50-107 (158)
 57 PF07912 ERp29_N:  ERp29, N-ter  22.7 3.4E+02  0.0073   21.1   5.7   43   68-110    71-125 (126)
 58 PRK13467 F0F1 ATP synthase sub  21.1 1.2E+02  0.0027   20.6   2.8   23  329-351    20-42  (66)
 59 PF07849 DUF1641:  Protein of u  20.4 1.1E+02  0.0023   18.7   2.2   17  333-349    13-29  (42)
 60 PHA02657 hypothetical protein;  20.1 1.7E+02  0.0038   20.8   3.4   16   13-28     27-42  (95)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.2e-53  Score=405.92  Aligned_cols=301  Identities=41%  Similarity=0.643  Sum_probs=260.4

Q ss_pred             cCcCCCCCCCCCCCCCcccccccCCCC-CcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCcc-c
Q 048567           36 RNKLNLLPPPGPKPWPLIGNLNLIGQL-PHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPA-L  113 (352)
Q Consensus        36 ~~~~~~~~~PGp~~~pi~G~l~~~~~~-~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~-~  113 (352)
                      +++++  +||||++||++||++++... +|..+.+|+++|||||++|+|+.++||++|+++++|+|++++..|++||. .
T Consensus        22 ~~~~~--lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~   99 (489)
T KOG0156|consen   22 RKRRN--LPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPT   99 (489)
T ss_pred             cCCCC--CCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCch
Confidence            34477  99999999999999999665 99999999999999999999999999999999999999999999999997 2


Q ss_pred             ccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHH
Q 048567          114 LAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYMF  193 (352)
Q Consensus       114 ~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~  193 (352)
                      ...+.+.+++.|++++++|+.||.+||+....+|+..+++++.....+|++.+++.+.+.    ..+ ++||+.+.+..+
T Consensus       100 ~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~----~~~-~~vdl~~~l~~~  174 (489)
T KOG0156|consen  100 ATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKS----KKG-EPVDLSELLDLL  174 (489)
T ss_pred             hhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhc----CCC-ceeeHHHHHHHH
Confidence            233556668899999999999999999999889999999999999999999999999751    223 899999999999


Q ss_pred             HHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccc-cccccC-ccchHHHHHHHHHHHHHHHHHHH
Q 048567          194 NLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIP-WLAFLD-LQGNVKRMKAVKKKADKFYEHVL  271 (352)
Q Consensus       194 t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i  271 (352)
                      +.|+||+++||.+++..+.   +...++.+.+.+.....+...+.+++| ++++++ ..+..++.+....++++++..+|
T Consensus       175 ~~nvI~~~~fG~rf~~~~~---~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i  251 (489)
T KOG0156|consen  175 VGNVICRMLFGRRFEEEDE---EEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERII  251 (489)
T ss_pred             HHHHHHHHHhCCccccCCc---hHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987432   345668888888888888888889999 677763 33667788888888999999999


Q ss_pred             HHHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhhh
Q 048567          272 DEHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKATE  351 (352)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~~  351 (352)
                      ++|++.. .   . ++.+||+|.||+..++++.. .+|+++|...+.++++||+||||+|+.|++.+|++|||||+|+|+
T Consensus       252 ~eh~~~~-~---~-~~~~D~vD~lL~~~~~~~~~-~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qe  325 (489)
T KOG0156|consen  252 DEHREKI-G---D-EEGRDFVDALLKLMKEEKAE-GLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQE  325 (489)
T ss_pred             HHHHhhh-c---c-CCCCcHHHHHHHhhcccccC-CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            9998764 1   1 23389999999987643212 299999999999999999999999999999999999999999999


Q ss_pred             C
Q 048567          352 E  352 (352)
Q Consensus       352 E  352 (352)
                      |
T Consensus       326 E  326 (489)
T KOG0156|consen  326 E  326 (489)
T ss_pred             H
Confidence            8


No 2  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.4e-45  Score=361.09  Aligned_cols=307  Identities=27%  Similarity=0.432  Sum_probs=229.4

Q ss_pred             CcCCCCCCCCCCCCCcccccccC-CCC-CcHHHHHHHhhcC-CeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCccc
Q 048567           37 NKLNLLPPPGPKPWPLIGNLNLI-GQL-PHVSLHSLSQKYG-PIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPAL  113 (352)
Q Consensus        37 ~~~~~~~~PGp~~~pi~G~l~~~-~~~-~~~~~~~~~~kYG-~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~~  113 (352)
                      ++.+  +||||+++|++||++++ .+. .+..+.+|+++|| +||++++|+.++|+++||++++++|.+++..|++||..
T Consensus        54 r~~~--lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~  131 (543)
T PLN02971         54 KLHP--LPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLT  131 (543)
T ss_pred             CCCC--CCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcc
Confidence            3446  89999999999999987 333 3677899999999 89999999999999999999999999999899999864


Q ss_pred             ccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHH
Q 048567          114 LAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYMF  193 (352)
Q Consensus       114 ~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~  193 (352)
                      .....+..+..++++..+|+.||++||+++.+++++..++.+.+.++++++.+++.+.+.    ...++++|+.+.+.++
T Consensus       132 ~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~vd~~~~~~~~  207 (543)
T PLN02971        132 YAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNM----VKNSEPVDLRFVTRHY  207 (543)
T ss_pred             cchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh----ccCCCceehHHHHHHH
Confidence            333333322234677788999999999997667888778888999999999998887653    2345689999999999


Q ss_pred             HHHHHHHHHHhccccccccc-chhhHHHHHHHHHHHHHhhc---CCCcccccccccccCccchHHHHHHHHHHHHHHHHH
Q 048567          194 NLATMSRMLLGKRYTEDNQN-NIVTAKEFTEIVDEVFFISG---ILDIGDAIPWLAFLDLQGNVKRMKAVKKKADKFYEH  269 (352)
Q Consensus       194 t~~vi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~  269 (352)
                      |+|+|+.++||.++...... .+.....+.+.+..++....   ...+.+++|++++++..+..+..++..+.+.+++..
T Consensus       208 t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~  287 (543)
T PLN02971        208 CGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDP  287 (543)
T ss_pred             HHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHH
Confidence            99999999999987321100 00011122233333333221   122345677766653234455566677788889999


Q ss_pred             HHHHHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHh
Q 048567          270 VLDEHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKA  349 (352)
Q Consensus       270 ~i~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl  349 (352)
                      +|+++++.. .. .....+.|+++.||+..++++ ...+++++|.+++.++++||+||||+|++|++++|++|||||+|+
T Consensus       288 ~i~~~~~~~-~~-~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl  364 (543)
T PLN02971        288 IIDERIKMW-RE-GKRTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKA  364 (543)
T ss_pred             HHHHHHHHH-hc-cCCCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHH
Confidence            998887643 11 011235799999998643221 224999999999999999999999999999999999999999999


Q ss_pred             hhC
Q 048567          350 TEE  352 (352)
Q Consensus       350 ~~E  352 (352)
                      |+|
T Consensus       365 ~~E  367 (543)
T PLN02971        365 MEE  367 (543)
T ss_pred             HHH
Confidence            998


No 3  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=3.4e-45  Score=355.81  Aligned_cols=322  Identities=33%  Similarity=0.548  Sum_probs=245.7

Q ss_pred             HHHHHHHHHHHHHHhhhhhcCcCCCCCCCCCCCCCcccccccCC-CCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHH
Q 048567           17 SIILCFPPVLLLLFHRLFSRNKLNLLPPPGPKPWPLIGNLNLIG-QLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEV   95 (352)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~PGp~~~pi~G~l~~~~-~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~   95 (352)
                      +|++++++++++++.+...+++.+  .||||+++|++||++++. .+++..+.+|+++||++|++++|+.++|+++||++
T Consensus         5 ~~~~~l~~~~~~~~~~~~~~~~~~--~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~   82 (499)
T PLN03234          5 LIIAALVAAAAFFFLRSTTKKSLR--LPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAEL   82 (499)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCC--CCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHH
Confidence            344444444555444444456667  899999999999999884 36788899999999999999999999999999999


Q ss_pred             HHHHHhhCCcccCCCcccccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCC
Q 048567           96 AELILKTHDLTFASRPALLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSS  175 (352)
Q Consensus        96 i~eil~~~~~~f~~r~~~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~  175 (352)
                      +++|+.+++..|..|+.......+...+.++.+...++.|+++||.+..++|++++++++.+.++++++++++.|.+.  
T Consensus        83 ~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~--  160 (499)
T PLN03234         83 AKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKA--  160 (499)
T ss_pred             HHHHHHhCCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHh--
Confidence            999999988889888754322222222333445566899999999865578999999999999999999999999754  


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccC-ccchHH
Q 048567          176 SSSPSSTPVHLKDRLYMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLD-LQGNVK  254 (352)
Q Consensus       176 ~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~  254 (352)
                        ..+++++|+.+.+..+++|+++.++||.+++...    ....++.+...+...........+.+|+++++. ..+..+
T Consensus       161 --~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~  234 (499)
T PLN03234        161 --ADQSGTVDLSELLLSFTNCVVCRQAFGKRYNEYG----TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSA  234 (499)
T ss_pred             --ccCCCeEEHHHHHHHHHHHHHHHHHhCCcccccc----hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHH
Confidence              3456789999999999999999999999886533    133455555555443333223344566654431 234456


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHH
Q 048567          255 RMKAVKKKADKFYEHVLDEHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEW  334 (352)
Q Consensus       255 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~  334 (352)
                      ++.++.+.+.+++..+|+++++.. .   .+....|+++.|++..++++.+..+++++|.+++.++++||+||||++|+|
T Consensus       235 ~~~~~~~~~~~~~~~~i~~~~~~~-~---~~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~  310 (499)
T PLN03234        235 RLKKAFKELDTYLQELLDETLDPN-R---PKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVW  310 (499)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc-c---cCCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHH
Confidence            778888999999999998876543 1   123467999999976543211236899999999999999999999999999


Q ss_pred             HHHHHhhChHHHHHhhhC
Q 048567          335 AMSELLKNPRVIQKATEE  352 (352)
Q Consensus       335 ~l~~L~~~Pevq~kl~~E  352 (352)
                      ++|+|++||++|+|+|+|
T Consensus       311 ~l~~L~~~P~v~~kl~~E  328 (499)
T PLN03234        311 AMTYLIKYPEAMKKAQDE  328 (499)
T ss_pred             HHHHHHhCHHHHHHHHHH
Confidence            999999999999999987


No 4  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.1e-44  Score=353.48  Aligned_cols=329  Identities=36%  Similarity=0.622  Sum_probs=246.2

Q ss_pred             HHHHHHHHHHHHHHHhhhhhcCcCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHH
Q 048567           16 YSIILCFPPVLLLLFHRLFSRNKLNLLPPPGPKPWPLIGNLNLIGQLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEV   95 (352)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PGp~~~pi~G~l~~~~~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~   95 (352)
                      +.|++++++++++.+.+...++..+  .||||+++|++||++++...++..+.+|+++|||+|++++|+.++|+++||++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~--~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~   85 (514)
T PLN03112          8 LLFSVLIFNVLIWRWLNASMRKSLR--LPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPEL   85 (514)
T ss_pred             HHHHHHHHHHHHHHHccccccCCCC--CccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHH
Confidence            3444555555555443333344556  89999999999999988666788899999999999999999999999999999


Q ss_pred             HHHHHhhCCcccCCCcccccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCC
Q 048567           96 AELILKTHDLTFASRPALLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSS  175 (352)
Q Consensus        96 i~eil~~~~~~f~~r~~~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~  175 (352)
                      +++++.+++..|++|+..........+..++++..+|+.||++||++..+.|++++++.+.+.+.++++.+++.+.+.  
T Consensus        86 ~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~--  163 (514)
T PLN03112         86 IREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEA--  163 (514)
T ss_pred             HHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHh--
Confidence            999999988889887754222221122234556678999999999976578999999999999999999999988653  


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccCccchHHH
Q 048567          176 SSSPSSTPVHLKDRLYMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKR  255 (352)
Q Consensus       176 ~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~  255 (352)
                        ...++++|+.+.+.++++|+++.++||.++.............+..++..+..........+++|+++++...+..++
T Consensus       164 --~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  241 (514)
T PLN03112        164 --AQTGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKK  241 (514)
T ss_pred             --hccCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHH
Confidence              234668999999999999999999999987432110001234566666655543322233456677666532334566


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHH
Q 048567          256 MKAVKKKADKFYEHVLDEHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWA  335 (352)
Q Consensus       256 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~  335 (352)
                      +++..+.+.+++..+++++++.. .......+..|+++.++++..+++ +..+++++|.+++.++++||+||||++|+|+
T Consensus       242 ~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~  319 (514)
T PLN03112        242 MREVEKRVDEFHDKIIDEHRRAR-SGKLPGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWA  319 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhh-cccccCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHH
Confidence            77788888999999998877643 110012345699999998643221 2358999999999999999999999999999


Q ss_pred             HHHHhhChHHHHHhhhC
Q 048567          336 MSELLKNPRVIQKATEE  352 (352)
Q Consensus       336 l~~L~~~Pevq~kl~~E  352 (352)
                      +|+|++||++|+|+++|
T Consensus       320 l~~L~~~P~vq~kl~~E  336 (514)
T PLN03112        320 MAEVIKNPRVLRKIQEE  336 (514)
T ss_pred             HHHHHhChHHHHHHHHH
Confidence            99999999999999998


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=8.1e-45  Score=354.16  Aligned_cols=304  Identities=34%  Similarity=0.653  Sum_probs=240.8

Q ss_pred             CcCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCcccccc
Q 048567           37 NKLNLLPPPGPKPWPLIGNLNLIGQLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPALLAG  116 (352)
Q Consensus        37 ~~~~~~~~PGp~~~pi~G~l~~~~~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~~~~~  116 (352)
                      ++.+  +||||+++|++||++++..+++..+.+|+++||+||++++|+.++|+++||++++++|.++...|.+|+.....
T Consensus        31 ~~~~--~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~  108 (517)
T PLN02687         31 HKRP--LPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGA  108 (517)
T ss_pred             CCCC--CCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccch
Confidence            3445  78999999999999988666888999999999999999999999999999999999999988889988764433


Q ss_pred             cccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHHHH
Q 048567          117 KHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYMFNLA  196 (352)
Q Consensus       117 ~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~t~~  196 (352)
                      ..+...+.+++++.+|+.||++||++..++|+.++++++.+.++++++.+++.|.+.     ..++++|+.+.+..+++|
T Consensus       109 ~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-----~~~~~vd~~~~~~~~t~d  183 (517)
T PLN02687        109 EHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ-----HGTAPVNLGQLVNVCTTN  183 (517)
T ss_pred             hhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh-----cCCCceeHHHHHHHHHHH
Confidence            333333456778878999999999986478999999999999999999999999763     245689999999999999


Q ss_pred             HHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 048567          197 TMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKRMKAVKKKADKFYEHVLDEHER  276 (352)
Q Consensus       197 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  276 (352)
                      +|+.++||.++...+.  +.....+.+.+..+..........+.+|+++++..++..++..+..+.+.+++..+|+++++
T Consensus       184 vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~  261 (517)
T PLN02687        184 ALGRAMVGRRVFAGDG--DEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKA  261 (517)
T ss_pred             HHHHHHhCccccccCC--cchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998753221  01344566666666554332223356777666533333456677778888899999988876


Q ss_pred             HhccccCCCCCCccHHHHHHhccCCC---CcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhhhC
Q 048567          277 HAKRKSFNEHGTKDMVDVLLQLADDP---TLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKATEE  352 (352)
Q Consensus       277 ~~~~~~~~~~~~~d~l~~lL~~~~~~---~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~~E  352 (352)
                      .. ..  .+....|+++.||+..+++   ..+..+++++|.+++.++++||+||||++++|++|+|++||++|+|+++|
T Consensus       262 ~~-~~--~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~E  337 (517)
T PLN02687        262 AG-QT--GSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEE  337 (517)
T ss_pred             hc-cc--cCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            54 10  1234579999999865421   11346999999999999999999999999999999999999999999987


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=5.8e-44  Score=346.63  Aligned_cols=310  Identities=34%  Similarity=0.613  Sum_probs=241.0

Q ss_pred             HHhhhhhcCcCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccC
Q 048567           29 LFHRLFSRNKLNLLPPPGPKPWPLIGNLNLIGQLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFA  108 (352)
Q Consensus        29 ~~~~~~~~~~~~~~~~PGp~~~pi~G~l~~~~~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~  108 (352)
                      ++++....++.+  +||||+++|++||++++...++..+.+|+++|||||++++|+.++|+++||+++++++.+++..|+
T Consensus        20 ~~~~~~~~~~~~--~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~   97 (504)
T PLN00110         20 FIRSLLPKPSRK--LPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFS   97 (504)
T ss_pred             HHHHHhhcccCC--CcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhc
Confidence            333344456677  899999999999998886567889999999999999999999999999999999999999888899


Q ss_pred             CCcccccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHH
Q 048567          109 SRPALLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKD  188 (352)
Q Consensus       109 ~r~~~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~  188 (352)
                      +|+..........++.+++++.+|+.||++||.++.+.|++++++.+.+.+.+++..+++.+.+.    ...|+++|+.+
T Consensus        98 ~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~----~~~g~~~~~~~  173 (504)
T PLN00110         98 NRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLEL----SQRGEPVVVPE  173 (504)
T ss_pred             CCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHh----ccCCCcEeHHH
Confidence            88754322222223345677778999999999997558999999999999999999999998764    23567899999


Q ss_pred             HHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccCccchHHHHHHHHHHHHHHHH
Q 048567          189 RLYMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKRMKAVKKKADKFYE  268 (352)
Q Consensus       189 ~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~  268 (352)
                      .+..+++|+||.++||.++.....   .....+.+++..++.........+.+|++.++..++..++..+..+.+.+++.
T Consensus       174 ~~~~~~~~vi~~~~fg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~  250 (504)
T PLN00110        174 MLTFSMANMIGQVILSRRVFETKG---SESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLT  250 (504)
T ss_pred             HHHHHHHHHHHHHHhCCcccccCc---hhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHH
Confidence            999999999999999998621111   12345666666665443333334567776665333344566667778888888


Q ss_pred             HHHHHHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHH
Q 048567          269 HVLDEHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQK  348 (352)
Q Consensus       269 ~~i~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~k  348 (352)
                      .+++++++.. .   ....+.|+++.+++..+.++ +..+++++|.+++.++++||+||||++++|++++|++||++|+|
T Consensus       251 ~~i~~~~~~~-~---~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~k  325 (504)
T PLN00110        251 RMIEEHTASA-H---ERKGNPDFLDVVMANQENST-GEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKR  325 (504)
T ss_pred             HHHHHHHhhc-c---ccccCCChhhHHhhcccccC-CCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHH
Confidence            8888776543 1   11235799999997643221 44699999999999999999999999999999999999999999


Q ss_pred             hhhC
Q 048567          349 ATEE  352 (352)
Q Consensus       349 l~~E  352 (352)
                      +|+|
T Consensus       326 l~~E  329 (504)
T PLN00110        326 AHEE  329 (504)
T ss_pred             HHHH
Confidence            9997


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=5.1e-44  Score=348.47  Aligned_cols=320  Identities=33%  Similarity=0.571  Sum_probs=239.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcCcCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCH
Q 048567           14 MWYSIILCFPPVLLLLFHRLFSRNKLNLLPPPGPKPWPLIGNLNLIGQLPHVSLHSLSQKYGPIIQLKFGLETVVVASSA   93 (352)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PGp~~~pi~G~l~~~~~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~   93 (352)
                      |++.+++++++++.+   ++..+++.+  +||||+++|++||++++....+..+.+|+++||++|++++|+.++|+++||
T Consensus        13 ~~~~~~~~~~~~~~~---~~~~~~~~~--~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp   87 (516)
T PLN02183         13 SFFLILISLFLFLGL---ISRLRRRLP--YPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSP   87 (516)
T ss_pred             hHHHHHHHHHHHHHH---HhhccCCCC--CCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCH
Confidence            454444333333333   223345677  899999999999998875556778999999999999999999999999999


Q ss_pred             HHHHHHHhhCCcccCCCcccccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhc
Q 048567           94 EVAELILKTHDLTFASRPALLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKS  173 (352)
Q Consensus        94 ~~i~eil~~~~~~f~~r~~~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~  173 (352)
                      +++++++.+++..|+.|+.......+..++.++++..+|+.|+++||++..++|+.++++.+.+++ ++++.++++|.+ 
T Consensus        88 ~~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~-  165 (516)
T PLN02183         88 EVARQVLQVQDSVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSS-  165 (516)
T ss_pred             HHHHHHHHhhhhhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHh-
Confidence            999999999888888887543333332223456777789999999999545789999999888864 688999999864 


Q ss_pred             CCCCCCCCCCcchHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccCccchH
Q 048567          174 SSSSSPSSTPVHLKDRLYMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNV  253 (352)
Q Consensus       174 ~~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~  253 (352)
                           ..++++|+.+.+..+++|+++.++||.+.+..       ...+.+.+..+............+|++.++...+.+
T Consensus       166 -----~~~~~v~~~~~~~~~~~~vi~~~~fG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  233 (516)
T PLN02183        166 -----NIGKPVNIGELIFTLTRNITYRAAFGSSSNEG-------QDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLN  233 (516)
T ss_pred             -----cCCCcEeHHHHHHHHHHHHHHhHhhcCcccch-------HHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHH
Confidence                 24678999999999999999999999876532       234555555554433333334567776655222345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccccC---CCCCCccHHHHHHhccCCCC---------cCCCCCHHHHHHHHHHHh
Q 048567          254 KRMKAVKKKADKFYEHVLDEHERHAKRKSF---NEHGTKDMVDVLLQLADDPT---------LEVKVERDHIKAAIQDLL  321 (352)
Q Consensus       254 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~d~l~~lL~~~~~~~---------~~~~~~~~~i~~~~~~l~  321 (352)
                      ++..+..+.+.+++..+|+++++..+..+.   .+....|+++.+|+...++.         .+..+++++|.+++.+++
T Consensus       234 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~  313 (516)
T PLN02183        234 KRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVM  313 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHH
Confidence            677778888999999988887654411100   01134699999998543210         123589999999999999


Q ss_pred             cccccchHHHHHHHHHHHhhChHHHHHhhhC
Q 048567          322 LGGIETSAITTEWAMSELLKNPRVIQKATEE  352 (352)
Q Consensus       322 ~aG~dTta~tl~~~l~~L~~~Pevq~kl~~E  352 (352)
                      +||+||||++++|++|+|++||++|+|+++|
T Consensus       314 ~AG~dTTa~tl~~~l~~La~~Pevq~kl~~E  344 (516)
T PLN02183        314 FGGTETVASAIEWAMAELMKSPEDLKRVQQE  344 (516)
T ss_pred             HcchhhHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            9999999999999999999999999999998


No 8  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=4.8e-43  Score=340.66  Aligned_cols=305  Identities=31%  Similarity=0.529  Sum_probs=230.0

Q ss_pred             hhcCcCCCCCCCCCCCCCcccccccC-CCCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCcc
Q 048567           34 FSRNKLNLLPPPGPKPWPLIGNLNLI-GQLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPA  112 (352)
Q Consensus        34 ~~~~~~~~~~~PGp~~~pi~G~l~~~-~~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~  112 (352)
                      ..+++.+  +||||+++|++||++++ ..+++..+.+|+++||++|++++|+.++|+++||+++++|+.+++..|.+++.
T Consensus        23 ~~~~~~~--~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~  100 (502)
T PLN02966         23 PKTKRYK--LPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPP  100 (502)
T ss_pred             cccCCCC--CCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCC
Confidence            3345567  89999999999999988 45688899999999999999999999999999999999999988877877654


Q ss_pred             cccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHH
Q 048567          113 LLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYM  192 (352)
Q Consensus       113 ~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~  192 (352)
                      .........+..++.+..+|+.|+++||++..++|++++++.+.+.++++++++++.|.+.    ..+++++|+.+.+..
T Consensus       101 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~----~~~~~~vdl~~~~~~  176 (502)
T PLN02966        101 HRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKA----ADKSEVVDISELMLT  176 (502)
T ss_pred             CccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh----ccCCCceeHHHHHHH
Confidence            3222222222234445567999999999955689999999999999999999999999764    235668999999999


Q ss_pred             HHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccC-ccchHHHHHHHHHHHHHHHHHHH
Q 048567          193 FNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLD-LQGNVKRMKAVKKKADKFYEHVL  271 (352)
Q Consensus       193 ~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i  271 (352)
                      +|+|+|+.++||.+++..+    .....+.+++...............+|++..+. .+++.+...+..+...+++..++
T Consensus       177 ~t~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  252 (502)
T PLN02966        177 FTNSVVCRQAFGKKYNEDG----EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVV  252 (502)
T ss_pred             HHHHHHHHHHhCCccCccc----hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999886533    133455555555444333333344566543331 12223334455566777777777


Q ss_pred             HHHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhhh
Q 048567          272 DEHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKATE  351 (352)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~~  351 (352)
                      +++.+.. .   ...+..|+++.+++..+++..+..++++++.+++.++++||+||||++|+|++|+|++||++|+|+|+
T Consensus       253 ~~~~~~~-~---~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~  328 (502)
T PLN02966        253 NETLDPK-R---VKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQA  328 (502)
T ss_pred             HHHHhcc-c---cccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHH
Confidence            7654422 1   12245789999997654321123589999999999999999999999999999999999999999999


Q ss_pred             C
Q 048567          352 E  352 (352)
Q Consensus       352 E  352 (352)
                      |
T Consensus       329 E  329 (502)
T PLN02966        329 E  329 (502)
T ss_pred             H
Confidence            7


No 9  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.4e-43  Score=331.59  Aligned_cols=307  Identities=22%  Similarity=0.316  Sum_probs=217.0

Q ss_pred             HHHHHHhhh-hhcCcCCCCCCCCCCCCCcccccccC--CCCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHh
Q 048567           25 VLLLLFHRL-FSRNKLNLLPPPGPKPWPLIGNLNLI--GQLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILK  101 (352)
Q Consensus        25 ~~~~~~~~~-~~~~~~~~~~~PGp~~~pi~G~l~~~--~~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~  101 (352)
                      ++++++.|. .+|++++   +|||+|+|++||+..+  .+.......+...+|||+++++.|..|.++|+|||.||+|++
T Consensus        16 l~y~~~~~~~~yw~rrG---i~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~i   92 (499)
T KOG0158|consen   16 LLYLWLRWTYSYWRRRG---IPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILI   92 (499)
T ss_pred             HHHHHHHhhhhhhccCC---CCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHH
Confidence            333344443 3565555   9999999999999987  222344444444455999999999999999999999999999


Q ss_pred             hCCcccCCCcccccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 048567          102 THDLTFASRPALLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSS  181 (352)
Q Consensus       102 ~~~~~f~~r~~~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~  181 (352)
                      ++.++|.+|......+.-...+...+|..+|+.||++|..++ |.|++.++++|.|++++.++++++.+.+.    ...+
T Consensus        93 k~F~~F~~r~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~----~~~~  167 (499)
T KOG0158|consen   93 KDFDNFYNRKRPIYGDPEDPLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRK----SEGG  167 (499)
T ss_pred             HhCccCcCCCCCCcCCCCCcccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHh----hccc
Confidence            999999995411111111012234567778999999999985 89999999999999999999999999874    2223


Q ss_pred             CCcchHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHh-hcCCC----cccccccccccCccchHHHH
Q 048567          182 TPVHLKDRLYMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFI-SGILD----IGDAIPWLAFLDLQGNVKRM  256 (352)
Q Consensus       182 ~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~l~~~~~~~~~  256 (352)
                      +.+++.+.+.++|.|||++++||.+.+...+    ....+.......+.. .....    ....+|.+...      .+.
T Consensus       168 ~~~~~~dl~~~yT~DVI~~~AfG~~~~s~~d----~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~------l~~  237 (499)
T KOG0158|consen  168 QEGEIKDLCARYTTDVIGSCAFGLDANSLRD----PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP------LRV  237 (499)
T ss_pred             CCccHHHHHHHHHHHHHhHhhcccchhhhcC----chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh------hhc
Confidence            6889999999999999999999998876542    223343323333222 11111    11223433221      011


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHhccCC---CCcCC-CCCHHHHHHHHHHHhcccccchHHHH
Q 048567          257 KAVKKKADKFYEHVLDEHERHAKRKSFNEHGTKDMVDVLLQLADD---PTLEV-KVERDHIKAAIQDLLLGGIETSAITT  332 (352)
Q Consensus       257 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~---~~~~~-~~~~~~i~~~~~~l~~aG~dTta~tl  332 (352)
                      ........+++..++.++.+.+ .  ..+..+.||+|.||+...+   +.... .+|.+||..+|+.|++||+||||+||
T Consensus       238 ~~~~~~~~~~~~~~v~~~v~~R-~--~~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tl  314 (499)
T KOG0158|consen  238 KLFPEDVTDFFRKLVNSRVEQR-E--KENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTL  314 (499)
T ss_pred             ccChHHHHHHHHHHHHHHHHHH-H--hcCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHH
Confidence            1222333444444444444433 1  1346889999999998753   11112 59999999999999999999999999


Q ss_pred             HHHHHHHhhChHHHHHhhhC
Q 048567          333 EWAMSELLKNPRVIQKATEE  352 (352)
Q Consensus       333 ~~~l~~L~~~Pevq~kl~~E  352 (352)
                      ++++|+||+|||||+|||+|
T Consensus       315 sf~lYeLA~~PdvQ~kLreE  334 (499)
T KOG0158|consen  315 SFALYELAKNPDVQDKLREE  334 (499)
T ss_pred             HHHHHHHhcChHHHHHHHHH
Confidence            99999999999999999998


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=3.2e-42  Score=336.04  Aligned_cols=306  Identities=20%  Similarity=0.350  Sum_probs=227.1

Q ss_pred             hcCcCCCCCCCCCCCCCcccccccCC---CCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCc
Q 048567           35 SRNKLNLLPPPGPKPWPLIGNLNLIG---QLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRP  111 (352)
Q Consensus        35 ~~~~~~~~~~PGp~~~pi~G~l~~~~---~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~  111 (352)
                      .+++++  +||||+++|++||++++.   ..++..+.+|+++||++|++++|+.++|+++||+++++++.+++..|++|+
T Consensus        30 ~~~~~~--lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp  107 (519)
T PLN00168         30 GKKGRR--LPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRP  107 (519)
T ss_pred             CCCCCC--CCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCC
Confidence            344566  899999999999998762   246778899999999999999999999999999999999999888899887


Q ss_pred             ccccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHH
Q 048567          112 ALLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLY  191 (352)
Q Consensus       112 ~~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~  191 (352)
                      .......+..++..+.+..+|+.||++||.+..++|++++++++.+.++++++.++++|.+.    ...++++|+.+.+.
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~----~~~~~~v~~~~~~~  183 (519)
T PLN00168        108 AVASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRRE----AEDAAAPRVVETFQ  183 (519)
T ss_pred             cccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCCCcCHHHHHH
Confidence            64332222221122333367999999998555689999999999999999999999999763    23445789999999


Q ss_pred             HHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhc-CCCcccccccccccCccchHHHHHHHHHHHHHHHHHH
Q 048567          192 MFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISG-ILDIGDAIPWLAFLDLQGNVKRMKAVKKKADKFYEHV  270 (352)
Q Consensus       192 ~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~  270 (352)
                      .++.++|+.++||.+++..      ....+......+..... ...+..++|++.+....+..++..+..+.+.+++..+
T Consensus       184 ~~~~~ii~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (519)
T PLN00168        184 YAMFCLLVLMCFGERLDEP------AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPL  257 (519)
T ss_pred             HHHHHHHHHHHcCCCcChh------hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987532      12233333333322221 1223345665432211222345567788889999999


Q ss_pred             HHHHHHHhccc-c-C-CC----CCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhCh
Q 048567          271 LDEHERHAKRK-S-F-NE----HGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNP  343 (352)
Q Consensus       271 i~~~~~~~~~~-~-~-~~----~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~P  343 (352)
                      |+++++..... + . ..    ....|+++.||+....++.+..+++++|.+++.++++||+||||++++|++++|++||
T Consensus       258 i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P  337 (519)
T PLN00168        258 IDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNP  337 (519)
T ss_pred             HHHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCH
Confidence            98887643100 0 0 00    1156999999986532221346999999999999999999999999999999999999


Q ss_pred             HHHHHhhhC
Q 048567          344 RVIQKATEE  352 (352)
Q Consensus       344 evq~kl~~E  352 (352)
                      ++|+|+++|
T Consensus       338 ~~q~kl~~E  346 (519)
T PLN00168        338 SIQSKLHDE  346 (519)
T ss_pred             HHHHHHHHH
Confidence            999999997


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=7.8e-42  Score=332.52  Aligned_cols=305  Identities=26%  Similarity=0.441  Sum_probs=219.1

Q ss_pred             hcCcCCCCCCCCCCCCCcccccccCCC-CCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCccc
Q 048567           35 SRNKLNLLPPPGPKPWPLIGNLNLIGQ-LPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPAL  113 (352)
Q Consensus        35 ~~~~~~~~~~PGp~~~pi~G~l~~~~~-~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~~  113 (352)
                      .+++.+  .||||+++|++|+++++.. ..+..+.+|+++|||||++++|+.++|+++||+.+++++.+++..|.+|+..
T Consensus        25 ~~~~~~--~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~  102 (503)
T PLN02394         25 RGKKLK--LPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRN  102 (503)
T ss_pred             hcCcCC--CCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCc
Confidence            356677  8999999999999988843 3578889999999999999999999999999999999999887778877643


Q ss_pred             ccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHH
Q 048567          114 LAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYMF  193 (352)
Q Consensus       114 ~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~  193 (352)
                      .....+...+.+++++.+|+.|+++||.+..++|++++++.+.+.++++++++++.|.+..   ...++.+|+.+.+..+
T Consensus       103 ~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~---~~~~~~v~~~~~~~~~  179 (503)
T PLN02394        103 VVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANP---EAATEGVVIRRRLQLM  179 (503)
T ss_pred             chHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhh---hccCCcEecHHHHHHH
Confidence            3333332234456777789999999999865889999999999999999999999997531   1134569999999999


Q ss_pred             HHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcC--CCcccccccccccCccchHHHHHHHHHHHHH-HHHHH
Q 048567          194 NLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGI--LDIGDAIPWLAFLDLQGNVKRMKAVKKKADK-FYEHV  270 (352)
Q Consensus       194 t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~-~~~~~  270 (352)
                      ++|+++.++||.+++..++   .....+.....+.......  ..+..++|++..+ ..++.+........... +...+
T Consensus       180 ~~dvi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  255 (503)
T PLN02394        180 MYNIMYRMMFDRRFESEDD---PLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKDYF  255 (503)
T ss_pred             HHHHHHHHHhCCCcccccc---hhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998865331   1222332333322222111  1122345544332 11212222222222222 33445


Q ss_pred             HHHHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhh
Q 048567          271 LDEHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKAT  350 (352)
Q Consensus       271 i~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~  350 (352)
                      ++++++.....+.+.....|+++.|++...+    +.++++++..++.++++||+||||+||+|++|+|++||++|+|||
T Consensus       256 i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~  331 (503)
T PLN02394        256 VDERKKLMSAKGMDKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLR  331 (503)
T ss_pred             HHHHHHHhhhccCCcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHH
Confidence            6666543200000122457999999986542    358999999999999999999999999999999999999999999


Q ss_pred             hC
Q 048567          351 EE  352 (352)
Q Consensus       351 ~E  352 (352)
                      +|
T Consensus       332 ~E  333 (503)
T PLN02394        332 DE  333 (503)
T ss_pred             HH
Confidence            98


No 12 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=7.1e-42  Score=331.14  Aligned_cols=299  Identities=24%  Similarity=0.335  Sum_probs=221.3

Q ss_pred             cCcCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCccccc
Q 048567           36 RNKLNLLPPPGPKPWPLIGNLNLIGQLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPALLA  115 (352)
Q Consensus        36 ~~~~~~~~~PGp~~~pi~G~l~~~~~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~~~~  115 (352)
                      +.+.+  .+|||+++|++||++++...++..+.+|+++|||||++++|+.++|+++||+++++++.++...|..|+....
T Consensus        25 ~~~~~--~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~  102 (482)
T PTZ00404         25 KIHKN--ELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPS  102 (482)
T ss_pred             hccCC--CCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcce
Confidence            34455  7999999999999998866788899999999999999999999999999999999999987777887765433


Q ss_pred             ccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHHH
Q 048567          116 GKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYMFNL  195 (352)
Q Consensus       116 ~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~t~  195 (352)
                      .... ..+.|+++ .+|+.|+++||++. +.|++++++++.+.+.+.++.+++.|.+.    ..+++.+|+.+.+.++++
T Consensus       103 ~~~~-~~~~~l~~-~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~----~~~~~~vd~~~~~~~~~~  175 (482)
T PTZ00404        103 IKHG-TFYHGIVT-SSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKI----ESSGETFEPRYYLTKFTM  175 (482)
T ss_pred             eeee-ccCCceec-cChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHH----HhcCCccCHHHHHHHHHH
Confidence            2211 12455554 56999999999995 88999999999999999999999999753    234667999999999999


Q ss_pred             HHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHH
Q 048567          196 ATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKRMKAVKKKADKFYEHVLDEHE  275 (352)
Q Consensus       196 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  275 (352)
                      |+|+.++||.+++..+...+.....+...+..++.........+.+|++..+ ...+.+...+..+.+.+++.+.+++++
T Consensus       176 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~  254 (482)
T PTZ00404        176 SAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHL  254 (482)
T ss_pred             HHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999876422100012345666666665543322222333333221 111122334455667777777776655


Q ss_pred             HHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhhhC
Q 048567          276 RHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKATEE  352 (352)
Q Consensus       276 ~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~~E  352 (352)
                      +..     +...+.|+++.|+++..+.   ...+.++|.+++.++++||+||||++|+|++|+|++||++|+|+++|
T Consensus       255 ~~~-----~~~~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~E  323 (482)
T PTZ00404        255 KTI-----DPEVPRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNE  323 (482)
T ss_pred             Hcc-----CCCCcccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence            432     1234679999999864221   12233458899999999999999999999999999999999999997


No 13 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=6.4e-42  Score=329.82  Aligned_cols=297  Identities=20%  Similarity=0.283  Sum_probs=225.4

Q ss_pred             CCCCCCCCcccccccCC-CCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCcccccccccccC
Q 048567           44 PPGPKPWPLIGNLNLIG-QLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPALLAGKHANFN  122 (352)
Q Consensus        44 ~PGp~~~pi~G~l~~~~-~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~~~~~~~~~~~  122 (352)
                      ||||+++|++||++++. .+++..+.+|+++||+||++++|+.++|+|+||++++++|.++...|++|+.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999999984 55888999999999999999999999999999999999999998899888644332323222


Q ss_pred             CceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 048567          123 YLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYMFNLATMSRML  202 (352)
Q Consensus       123 g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~t~~vi~~~~  202 (352)
                      +.++.+.++|+.|+++||.+..++|+..+++.+.+.+++.++.+++.+.+.+.  ...++++|+.+.+.++|+|+++.++
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~~~~t~dvi~~~~  158 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVK--DDPHSPVNFRDVFENELFGLSLIQA  158 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhcc--ccCCCceeHHHHHHHHHHHHHHHHH
Confidence            33455556799999999988777899888899999999999999999875421  1246789999999999999999999


Q ss_pred             Hhcccccccccc-hhh---HHHHHHHHHHHHHhhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048567          203 LGKRYTEDNQNN-IVT---AKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKRMKAVKKKADKFYEHVLDEHERHA  278 (352)
Q Consensus       203 fG~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  278 (352)
                      ||.+++...... ...   ...+......++.......+.+++|++++++...+.+...+......+++..++++++++.
T Consensus       159 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  238 (466)
T PLN02655        159 LGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRI  238 (466)
T ss_pred             hccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999876422100 000   1223333444444332223345788777663222333444444555678888888777654


Q ss_pred             ccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhhhC
Q 048567          279 KRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKATEE  352 (352)
Q Consensus       279 ~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~~E  352 (352)
                       .   .+..+.|+++.+|...      ..+++++|.+++.++++||+||||++|+|++++|++||++|+|+|+|
T Consensus       239 -~---~~~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~E  302 (466)
T PLN02655        239 -A---RGEERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYRE  302 (466)
T ss_pred             -c---CCCCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence             1   2234569999999753      25899999999999999999999999999999999999999999987


No 14 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.6e-41  Score=331.25  Aligned_cols=296  Identities=17%  Similarity=0.232  Sum_probs=217.1

Q ss_pred             cCCCCCCCCCCCCCcccccccCCC-------------------CCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHH
Q 048567           38 KLNLLPPPGPKPWPLIGNLNLIGQ-------------------LPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAEL   98 (352)
Q Consensus        38 ~~~~~~~PGp~~~pi~G~l~~~~~-------------------~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~e   98 (352)
                      +++  .||||+++|++||++++..                   .....+.+|+++|||+|++++|+.++|+++||+++++
T Consensus        40 ~~~--~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~  117 (516)
T PLN02290         40 ERQ--GVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKE  117 (516)
T ss_pred             HHc--CCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHH
Confidence            455  5999999999999988621                   1223468899999999999999999999999999999


Q ss_pred             HHhhCCcccCCCcccccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCC
Q 048567           99 ILKTHDLTFASRPALLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSS  178 (352)
Q Consensus        99 il~~~~~~f~~r~~~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~  178 (352)
                      ++.++. .+.+|+...........|.++.+ .+|+.||++||++. +.|++++++.+.+.+.++++.+++.|.+.    .
T Consensus       118 il~~~~-~~~~r~~~~~~~~~~~~g~~l~~-~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~----~  190 (516)
T PLN02290        118 LLTKYN-TVTGKSWLQQQGTKHFIGRGLLM-ANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKA----V  190 (516)
T ss_pred             HHhcCC-CCCCCcchhhhHHHHHhcCCccc-cCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHH----H
Confidence            999874 45666532111111112445544 56999999999985 88999999999999999999999999763    2


Q ss_pred             C-CCCCcchHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccCccchHHHHH
Q 048567          179 P-SSTPVHLKDRLYMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKRMK  257 (352)
Q Consensus       179 ~-~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~  257 (352)
                      . +++++|+.+.+.++++|+|+.++||.+++..+        .+...+..+............+|++++++ .+..++++
T Consensus       191 ~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~  261 (516)
T PLN02290        191 ESGQTEVEIGEYMTRLTADIISRTEFDSSYEKGK--------QIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIK  261 (516)
T ss_pred             hcCCceEEhHHHHHHHHHHHHHHHHcCCccccch--------HHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHH
Confidence            2 33589999999999999999999999875322        12222222222111111112345555442 23345566


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHhccCCC-CcCCCCCHHHHHHHHHHHhcccccchHHHHHHHH
Q 048567          258 AVKKKADKFYEHVLDEHERHAKRKSFNEHGTKDMVDVLLQLADDP-TLEVKVERDHIKAAIQDLLLGGIETSAITTEWAM  336 (352)
Q Consensus       258 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~-~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l  336 (352)
                      +..+.+.+++.++|+++++.. ..+.++....|+++.+|+...+. +++..+++++|.+++.++++||+|||+++++|++
T Consensus       262 ~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l  340 (516)
T PLN02290        262 SLKGEVERLLMEIIQSRRDCV-EIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTL  340 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh-hcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            677888999999998887654 11111224579999999864321 1133589999999999999999999999999999


Q ss_pred             HHHhhChHHHHHhhhC
Q 048567          337 SELLKNPRVIQKATEE  352 (352)
Q Consensus       337 ~~L~~~Pevq~kl~~E  352 (352)
                      ++|++||++|+|+|+|
T Consensus       341 ~~L~~~P~vq~kl~~E  356 (516)
T PLN02290        341 MLLASNPTWQDKVRAE  356 (516)
T ss_pred             HHHhcCHHHHHHHHHH
Confidence            9999999999999997


No 15 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=7.3e-40  Score=319.16  Aligned_cols=304  Identities=26%  Similarity=0.398  Sum_probs=215.4

Q ss_pred             CCCCCCCCCcccccccC-CCCCc-HHHHHHHhhc-CCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCccccccccc
Q 048567           43 PPPGPKPWPLIGNLNLI-GQLPH-VSLHSLSQKY-GPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPALLAGKHA  119 (352)
Q Consensus        43 ~~PGp~~~pi~G~l~~~-~~~~~-~~~~~~~~kY-G~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~~~~~~~~  119 (352)
                      +||||+++|++||++++ ...++ ..+.++.++| |+||++++|+.++|+++||++++++|.+++..|++|+.......+
T Consensus        41 ~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l  120 (534)
T PLN03018         41 LPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMETI  120 (534)
T ss_pred             CCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhh
Confidence            79999999999999997 33332 3455666666 799999999999999999999999999988889998865443333


Q ss_pred             ccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHHHHHHH
Q 048567          120 NFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYMFNLATMS  199 (352)
Q Consensus       120 ~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~t~~vi~  199 (352)
                      ..++.++++..+|+.||++||++++.+++....+.+.+.++.+++.+++.+.+.    ...++++|+.+.+.++++|+|+
T Consensus       121 ~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~vd~~~~~~~~t~~vi~  196 (534)
T PLN03018        121 GDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSM----YQRSETVDVRELSRVYGYAVTM  196 (534)
T ss_pred             ccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh----cccCCceeHHHHHHHHHHHHHH
Confidence            333345777777999999999997434456555566667777889999999753    2345679999999999999999


Q ss_pred             HHHHhccccccccc---chhhHHHHHHHHHHHHH---hhcCCCcccccc-cccccCccchHHHHHHHHHHHHHHHHHHHH
Q 048567          200 RMLLGKRYTEDNQN---NIVTAKEFTEIVDEVFF---ISGILDIGDAIP-WLAFLDLQGNVKRMKAVKKKADKFYEHVLD  272 (352)
Q Consensus       200 ~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~  272 (352)
                      .++||.++...+..   .......+.........   ........+.+| |++++...+..++.....+.+.+++..+++
T Consensus       197 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  276 (534)
T PLN03018        197 RMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIID  276 (534)
T ss_pred             HHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence            99999987432110   00111112212221111   111112223444 444332233345555666778888999998


Q ss_pred             HHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhhhC
Q 048567          273 EHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKATEE  352 (352)
Q Consensus       273 ~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~~E  352 (352)
                      ++++..+.. .....+.|+++.||+..++++ ...+++++|.+++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       277 ~~~~~~~~~-~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~E  354 (534)
T PLN03018        277 ERVELWREK-GGKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKE  354 (534)
T ss_pred             HHHHHhhhc-cCCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            887643110 011235799999998653221 124899999999999999999999999999999999999999999987


No 16 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=7.4e-40  Score=317.49  Aligned_cols=282  Identities=18%  Similarity=0.200  Sum_probs=207.1

Q ss_pred             hhcCcCCCCCCCCCCCCCcccccccC-C----CCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccC
Q 048567           34 FSRNKLNLLPPPGPKPWPLIGNLNLI-G----QLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFA  108 (352)
Q Consensus        34 ~~~~~~~~~~~PGp~~~pi~G~l~~~-~----~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~  108 (352)
                      ..+++.+  +||||+++|++||++++ .    +.++..+.+|+++||++|++++|+.++|+++||++++++|.+++..|+
T Consensus        32 ~~~~~~~--~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~  109 (490)
T PLN02500         32 PKQKRFN--LPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFE  109 (490)
T ss_pred             cccCCCC--CCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEE
Confidence            3455667  89999999999998654 2    245677899999999999999999999999999999999999887776


Q ss_pred             CCcccccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhh-hHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchH
Q 048567          109 SRPALLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQ-SEYIRVEERKALLFKMYKSSSSSSPSSTPVHLK  187 (352)
Q Consensus       109 ~r~~~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~  187 (352)
                      ++........+  ++.++++ .+|+.||++||+++ +.|++.+++. +.+.+++.+..+++.|.        .++++|+.
T Consensus       110 ~~~~~~~~~~~--g~~~~~~-~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~--------~~~~vd~~  177 (490)
T PLN02500        110 CSYPRSIGGIL--GKWSMLV-LVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWK--------ENSTFSAQ  177 (490)
T ss_pred             eeCchHHHHHh--Ccccccc-cCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhC--------CCCCEEeh
Confidence            54321111111  2234544 46999999999986 7899988887 56777777777777663        23479999


Q ss_pred             HHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccCccchHHHHHHHHHHHHHHH
Q 048567          188 DRLYMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKRMKAVKKKADKFY  267 (352)
Q Consensus       188 ~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~  267 (352)
                      +.+.++++|+||+++||.+.+..+      ...+.....++.......  ...+|..      . .++..++.+.+.+++
T Consensus       178 ~~~~~~~~~vi~~~~fg~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~p~~------~-~~~~~~~~~~~~~~~  242 (490)
T PLN02500        178 DEAKKFTFNLMAKHIMSMDPGEEE------TEQLKKEYVTFMKGVVSA--PLNFPGT------A-YRKALKSRATILKFI  242 (490)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCchH------HHHHHHHHHHHHhhhhcc--hhcCCCc------c-cHHHHHHHHHHHHHH
Confidence            999999999999999998754321      222322222222211110  0112211      1 245566778889999


Q ss_pred             HHHHHHHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHH
Q 048567          268 EHVLDEHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQ  347 (352)
Q Consensus       268 ~~~i~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~  347 (352)
                      .++++++++..+.. .....+.|+++.+++.       ..+++++|.+++.++++||+||||+|++|++|+|++|||+|+
T Consensus       243 ~~~i~~~~~~~~~~-~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~  314 (490)
T PLN02500        243 ERKMEERIEKLKEE-DESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQ  314 (490)
T ss_pred             HHHHHHHHHhhhcc-cCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHH
Confidence            99998887644111 1112357999999973       248999999999999999999999999999999999999999


Q ss_pred             HhhhC
Q 048567          348 KATEE  352 (352)
Q Consensus       348 kl~~E  352 (352)
                      |+|+|
T Consensus       315 kl~~E  319 (490)
T PLN02500        315 ELREE  319 (490)
T ss_pred             HHHHH
Confidence            99998


No 17 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.6e-39  Score=312.39  Aligned_cols=292  Identities=23%  Similarity=0.344  Sum_probs=219.0

Q ss_pred             cCCCCCCCCCCCCCcccccccC-CC--CCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCcccc
Q 048567           38 KLNLLPPPGPKPWPLIGNLNLI-GQ--LPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPALL  114 (352)
Q Consensus        38 ~~~~~~~PGp~~~pi~G~l~~~-~~--~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~~~  114 (352)
                      +.+  .||||+++|++|+++++ ..  .....+.++..+||++|+.|+|+.++|+++||+.+++||.++..++..-+...
T Consensus        33 ~~~--~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~  110 (497)
T KOG0157|consen   33 KKK--LPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYP  110 (497)
T ss_pred             Hhc--cCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHH
Confidence            455  79999999999999998 22  45667789999999999999999999999999999999976554444333222


Q ss_pred             -cccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHH
Q 048567          115 -AGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYMF  193 (352)
Q Consensus       115 -~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~  193 (352)
                       ....  ..|.|++++. |+.|+++||+++ ++|+.+.++++.+.+.+.+..+...+...     ..++.+|+.+.+.++
T Consensus       111 ~~~~~--~lG~gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~-----~~~~~vd~~~~~~~~  181 (497)
T KOG0157|consen  111 ESLKP--WLGDGLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELA-----ASGEEVDLQDLLKRL  181 (497)
T ss_pred             HHHHH--HhcCccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHh-----hcCCeEcHHHHHHHH
Confidence             2222  2355888777 999999999986 89999999999999999999888887653     223339999999999


Q ss_pred             HHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccc-cccccCccchHHHHHHHHHHHHHHHHHHHH
Q 048567          194 NLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIP-WLAFLDLQGNVKRMKAVKKKADKFYEHVLD  272 (352)
Q Consensus       194 t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~  272 (352)
                      |+|+||.++||......+.   ....++..++..........   ...| +..++...+..++..++.+.++++++++|+
T Consensus       182 tld~i~~~~~G~~~~~~~~---~~~~~~~~a~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~  255 (497)
T KOG0157|consen  182 TLDIICKTAMGPESLDAEG---PELFEYVQAFDDLTELISKR---INLPLGTKFLYGLKSERKLKKARKILHDFLEKIIR  255 (497)
T ss_pred             HHHHHHHHhcCCccccccC---CcccHHHHHHHHHHHHHHHH---HcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999932211111   12334555555444333211   1234 333332123568889999999999999999


Q ss_pred             HHHHHhccccCCC--CCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhh
Q 048567          273 EHERHAKRKSFNE--HGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKAT  350 (352)
Q Consensus       273 ~~~~~~~~~~~~~--~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~  350 (352)
                      ++++.. .++..+  ....|+++.+....     +..+++++|++++.+|++||+||||++++|+++.|+.||+||+|++
T Consensus       256 ~rr~~~-~~~~~~~~~~~~d~L~~~~~~~-----~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~  329 (497)
T KOG0157|consen  256 ERREEL-EKEGSGEEKKRLDFLDTLLLEE-----DKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLR  329 (497)
T ss_pred             HHHHHH-HhcCCcccchhhhHHHHHHHhc-----cCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHH
Confidence            998765 211111  34678888633322     2469999999999999999999999999999999999999999999


Q ss_pred             hC
Q 048567          351 EE  352 (352)
Q Consensus       351 ~E  352 (352)
                      +|
T Consensus       330 eE  331 (497)
T KOG0157|consen  330 EE  331 (497)
T ss_pred             HH
Confidence            98


No 18 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=2.4e-38  Score=306.91  Aligned_cols=302  Identities=15%  Similarity=0.168  Sum_probs=211.1

Q ss_pred             hhcCcCCCCCCCCCCCCCcccccccCCCCC---cHHHHHHHhhcCCeeE---EeecCeeEEEeCCHHHHHHHHhhCCccc
Q 048567           34 FSRNKLNLLPPPGPKPWPLIGNLNLIGQLP---HVSLHSLSQKYGPIIQ---LKFGLETVVVASSAEVAELILKTHDLTF  107 (352)
Q Consensus        34 ~~~~~~~~~~~PGp~~~pi~G~l~~~~~~~---~~~~~~~~~kYG~i~~---i~~g~~~~vvv~~~~~i~eil~~~~~~f  107 (352)
                      .+|++++   .|||+++|++||++++.++.   +..+.+..++||..++   +|+|+.++|+++||+++++||.++..+|
T Consensus        26 ~~~~~~~---~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~  102 (500)
T PLN02169         26 IHKKPHG---QPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNY  102 (500)
T ss_pred             HHhccCC---CCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccC
Confidence            4466666   89999999999998772222   2233333344886655   6789999999999999999999987777


Q ss_pred             CCCcccccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhh--hHHHHHHHHHHHHHHHHhcCCCCCCCCCCcc
Q 048567          108 ASRPALLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQ--SEYIRVEERKALLFKMYKSSSSSSPSSTPVH  185 (352)
Q Consensus       108 ~~r~~~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~--~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd  185 (352)
                      .+++.......  ..|.|++++ +|+.||++||+++ |+|+.++++.  +.+.+++.++.+++.+.+.    +..++++|
T Consensus       103 ~k~~~~~~~~~--~~g~gl~~~-~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~vd  174 (500)
T PLN02169        103 PKGPEFKKIFD--VLGEGILTV-DFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNA----AHENIIID  174 (500)
T ss_pred             CCcHHHHHHHH--hhcCccccc-CcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH----HhcCCeEe
Confidence            76543211111  235666665 5999999999996 8999887764  3467778888888888653    23566899


Q ss_pred             hHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccc-----cccCccchHHHHHHHH
Q 048567          186 LKDRLYMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWL-----AFLDLQGNVKRMKAVK  260 (352)
Q Consensus       186 ~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-----~~l~~~~~~~~~~~~~  260 (352)
                      +.+.+.++|+|+||.++||.+.+.....  .....+..++.........   ..++|++     .++ ..+..++..++.
T Consensus       175 ~~~~~~~~t~dvi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~-~~~~~~~~~~~~  248 (500)
T PLN02169        175 LQDVFMRFMFDTSSILMTGYDPMSLSIE--MLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWI-GIGLERKMRTAL  248 (500)
T ss_pred             HHHHHHHHHHHHHHhheeCCCccccCCC--CCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHh-CCchhhHHHHHH
Confidence            9999999999999999999877532210  0112344333333221111   1123321     122 123457778899


Q ss_pred             HHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHhccCCC-CcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHH
Q 048567          261 KKADKFYEHVLDEHERHAKRKSFNEHGTKDMVDVLLQLADDP-TLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSEL  339 (352)
Q Consensus       261 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~-~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L  339 (352)
                      +.+++++..+|+++++....+.+......|+++.+++....+ ..+..+++++|.+++.++++||+||||+||+|++|+|
T Consensus       249 ~~~~~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~L  328 (500)
T PLN02169        249 ATVNRMFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLL  328 (500)
T ss_pred             HHHHHHHHHHHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHH
Confidence            999999999998887642010001122479999999864321 1123478999999999999999999999999999999


Q ss_pred             hhChHHHHHhhhC
Q 048567          340 LKNPRVIQKATEE  352 (352)
Q Consensus       340 ~~~Pevq~kl~~E  352 (352)
                      ++||+||+|+++|
T Consensus       329 a~~Pevq~kl~~E  341 (500)
T PLN02169        329 SKHPQVMAKIRHE  341 (500)
T ss_pred             HCCHHHHHHHHHH
Confidence            9999999999998


No 19 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=7e-38  Score=301.40  Aligned_cols=298  Identities=18%  Similarity=0.250  Sum_probs=216.1

Q ss_pred             chHHHHHHHH-HHHHHHHHHHhhh--hhcCcCCCCCCCCCCCCCcccccccC-CCCCcHHHHHHHhhcCCeeEEeecCee
Q 048567           11 DSVMWYSIIL-CFPPVLLLLFHRL--FSRNKLNLLPPPGPKPWPLIGNLNLI-GQLPHVSLHSLSQKYGPIIQLKFGLET   86 (352)
Q Consensus        11 ~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~PGp~~~pi~G~l~~~-~~~~~~~~~~~~~kYG~i~~i~~g~~~   86 (352)
                      -|-|++++++ ++++++..++.++  ..+++.+  .||||+++|++||++++ .++++..+.+++++||++|++++|+.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~   80 (463)
T PLN02196          3 FSALFLTLFAGALFLCLLRFLAGFRRSSSTKLP--LPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCP   80 (463)
T ss_pred             hHhhhhHHHHHHHHHHHHHHHHHhccCCCCCCC--CCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCc
Confidence            3456654443 3333333333332  2334566  78999999999999886 567888999999999999999999999


Q ss_pred             EEEeCCHHHHHHHHhhCCcccCCCcccccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHH
Q 048567           87 VVVASSAEVAELILKTHDLTFASRPALLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKAL  166 (352)
Q Consensus        87 ~vvv~~~~~i~eil~~~~~~f~~r~~~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l  166 (352)
                      +|+++||+++++++.++...|  ++..........++.++ +..+|+.|+++||+++ +.|++++++.+.+.+++.++++
T Consensus        81 ~v~v~~p~~~~~vl~~~~~~~--~~~~~~~~~~~~g~~~l-~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~  156 (463)
T PLN02196         81 CVMISSPEAAKFVLVTKSHLF--KPTFPASKERMLGKQAI-FFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQES  156 (463)
T ss_pred             eEEEcCHHHHHHHHhCCCCcc--cccCchHHHHHcCcccc-cccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHH
Confidence            999999999999999877656  33322111111222344 4456999999999996 7899999999999999999988


Q ss_pred             HHHHHhcCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccc
Q 048567          167 LFKMYKSSSSSSPSSTPVHLKDRLYMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAF  246 (352)
Q Consensus       167 ~~~l~~~~~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~  246 (352)
                      ++.|.         ++++|+.+.+..+++|+++.++||.+....       ...+......+.    ..  ...+|+  .
T Consensus       157 ~~~~~---------~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~-------~~~~~~~~~~~~----~~--~~~~~~--~  212 (463)
T PLN02196        157 LNSWE---------GTQINTYQEMKTYTFNVALLSIFGKDEVLY-------REDLKRCYYILE----KG--YNSMPI--N  212 (463)
T ss_pred             HHcCC---------CCeEEeHHHHHHHHHHHHHHHHcCCCCchH-------HHHHHHHHHHHh----cc--hhcccc--c
Confidence            87762         347899999999999999999999874321       112222111111    10  112332  1


Q ss_pred             cCccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhccccc
Q 048567          247 LDLQGNVKRMKAVKKKADKFYEHVLDEHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIE  326 (352)
Q Consensus       247 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~d  326 (352)
                      ++. ...++..++.+.+.+++.++|+++++..       .++.|+++.+++.      +..+++++|.+++.++++||+|
T Consensus       213 ~p~-~~~~~~~~a~~~~~~~~~~~i~~~~~~~-------~~~~d~l~~ll~~------~~~l~~~ei~~~~~~~~~Ag~d  278 (463)
T PLN02196        213 LPG-TLFHKSMKARKELAQILAKILSKRRQNG-------SSHNDLLGSFMGD------KEGLTDEQIADNIIGVIFAARD  278 (463)
T ss_pred             CCC-ccchHHHHHHHHHHHHHHHHHHHHhhcC-------CCcccHHHHHHhc------CCCCCHHHHHHHHHHHHHhhhH
Confidence            211 1134566777788888888887765422       3467999999863      2358999999999999999999


Q ss_pred             chHHHHHHHHHHHhhChHHHHHhhhC
Q 048567          327 TSAITTEWAMSELLKNPRVIQKATEE  352 (352)
Q Consensus       327 Tta~tl~~~l~~L~~~Pevq~kl~~E  352 (352)
                      ||+++++|++++|++||++|+|+++|
T Consensus       279 Tta~~l~~~l~~L~~~P~vq~kl~~E  304 (463)
T PLN02196        279 TTASVLTWILKYLAENPSVLEAVTEE  304 (463)
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            99999999999999999999999987


No 20 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=7.3e-38  Score=301.38  Aligned_cols=293  Identities=17%  Similarity=0.186  Sum_probs=212.2

Q ss_pred             HHHHHHHHHHHhhh-hhcCcCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHH
Q 048567           20 LCFPPVLLLLFHRL-FSRNKLNLLPPPGPKPWPLIGNLNLIGQLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAEL   98 (352)
Q Consensus        20 ~~~~~~~~~~~~~~-~~~~~~~~~~~PGp~~~pi~G~l~~~~~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~e   98 (352)
                      +.++++++++..|. .++++++  +||||+++|++||++.+.++++..+.+|+++||++|++++|+.++++++||+++++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~r~~--~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~   87 (463)
T PLN02774         10 VIIVCLCSALLRWNEVRYSKKG--LPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRY   87 (463)
T ss_pred             HHHHHHHHHHHHHHhhccCCCC--CCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHH
Confidence            33333333333333 3445667  78999999999999887445667889999999999999999999999999999999


Q ss_pred             HHhhCCcccCCCcccccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhh-hHHHHHHHHHHHHHHHHhcCCCC
Q 048567           99 ILKTHDLTFASRPALLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQ-SEYIRVEERKALLFKMYKSSSSS  177 (352)
Q Consensus        99 il~~~~~~f~~r~~~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~  177 (352)
                      ++.++...|..+........+  ++.++. ..+|+.|+++|++++ +.|++..++. +.+.+.+.+++++++|.      
T Consensus        88 il~~~~~~~~~~~~~~~~~~l--g~~~~~-~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  157 (463)
T PLN02774         88 ILMNEGKGLVPGYPQSMLDIL--GTCNIA-AVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWD------  157 (463)
T ss_pred             HHcCCCCeEEecCCHHHHHHh--Cccchh-hcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhC------
Confidence            999877666432211111111  222444 456999999999985 7899998875 78998888888877763      


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccCccchHHHHH
Q 048567          178 SPSSTPVHLKDRLYMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKRMK  257 (352)
Q Consensus       178 ~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~  257 (352)
                        .++++|+.+.+..+++++++.++||.+.+..       ...+......+.   ... .  .+|.  +++.+ ..++..
T Consensus       158 --~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~-------~~~~~~~~~~~~---~~~-~--~~~~--~lp~~-~~~~~~  219 (463)
T PLN02774        158 --GLKTIDIQEKTKEMALLSALKQIAGTLSKPI-------SEEFKTEFFKLV---LGT-L--SLPI--DLPGT-NYRSGV  219 (463)
T ss_pred             --CCCCEEeeHHHHHHHHHHHHHHHcCCCChHH-------HHHHHHHHHHHh---ccc-c--cCCc--CCCCh-hhhHHH
Confidence              2357999999999999999999999764321       122222222221   110 0  1221  22111 134556


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHH
Q 048567          258 AVKKKADKFYEHVLDEHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMS  337 (352)
Q Consensus       258 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~  337 (352)
                      ++.+.+.+++.+.|+++++..       ..++|+++.++....+   +..+++++|.+++.++++||+|||+++++|+++
T Consensus       220 ~~~~~~~~~~~~~i~~r~~~~-------~~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~  289 (463)
T PLN02774        220 QARKNIVRMLRQLIQERRASG-------ETHTDMLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVK  289 (463)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC-------CCcccHHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence            777888888888888875422       3457999999974321   335899999999999999999999999999999


Q ss_pred             HHhhChHHHHHhhhC
Q 048567          338 ELLKNPRVIQKATEE  352 (352)
Q Consensus       338 ~L~~~Pevq~kl~~E  352 (352)
                      +|++||++|+|+|+|
T Consensus       290 ~L~~~P~~q~kl~~E  304 (463)
T PLN02774        290 YLHDHPKALQELRKE  304 (463)
T ss_pred             HHHcCHHHHHHHHHH
Confidence            999999999999987


No 21 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.1e-37  Score=304.10  Aligned_cols=298  Identities=18%  Similarity=0.239  Sum_probs=209.1

Q ss_pred             cCcCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHhhc---CCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCcc
Q 048567           36 RNKLNLLPPPGPKPWPLIGNLNLIGQLPHVSLHSLSQKY---GPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPA  112 (352)
Q Consensus        36 ~~~~~~~~~PGp~~~pi~G~l~~~~~~~~~~~~~~~~kY---G~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~  112 (352)
                      |++++   +|||+++|++||++++... +..+.+|.++|   |++|++++|+.++|+++||+++++|+.++...|..++.
T Consensus        27 ~~~~~---~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~  102 (516)
T PLN03195         27 WSQRN---RKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEV  102 (516)
T ss_pred             hhccc---cCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHh
Confidence            44445   8999999999998765222 44577888888   89999999999999999999999999886555654322


Q ss_pred             cc-cccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHH-HHHHHHHHHHHHhcCCCCCCCCCCcchHHHH
Q 048567          113 LL-AGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIR-VEERKALLFKMYKSSSSSSPSSTPVHLKDRL  190 (352)
Q Consensus       113 ~~-~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i-~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~  190 (352)
                      .. ....+  .|.++ ++.+|+.|+++||++. +.|++++++.+.+.+ .+.++.+++.+.+.    ...++++|+.+.+
T Consensus       103 ~~~~~~~~--~g~~l-~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~----~~~~~~vd~~~~~  174 (516)
T PLN03195        103 YHSYMEVL--LGDGI-FNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQA----SFANQVVDMQDLF  174 (516)
T ss_pred             HHHHHHHH--hcCee-eccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH----HhcCCeEcHHHHH
Confidence            11 01111  24454 4567999999999985 789999999999986 55566777777642    2345689999999


Q ss_pred             HHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCccccccc--ccccCccchHHHHHHHHHHHHHHHH
Q 048567          191 YMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPW--LAFLDLQGNVKRMKAVKKKADKFYE  268 (352)
Q Consensus       191 ~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~l~~~~~~~~~~~~~~~~~~~~~  268 (352)
                      ..+++|+|+.++||.+++..+..  .....+...+..........   ...|+  +..+...+..+++.+..+.+++++.
T Consensus       175 ~~~~~dvi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (516)
T PLN03195        175 MRMTLDSICKVGFGVEIGTLSPS--LPENPFAQAFDTANIIVTLR---FIDPLWKLKKFLNIGSEALLSKSIKVVDDFTY  249 (516)
T ss_pred             HHHHHHHHHHHHhCCCccccccC--CCccHHHHHHHHHHHHHHHH---HhcchhhHHHhcccchHHHHHHHHHHHHHHHH
Confidence            99999999999999988653311  01123333333322111100   01121  1111011223455667778888888


Q ss_pred             HHHHHHHHHhccccC-CCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHH
Q 048567          269 HVLDEHERHAKRKSF-NEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQ  347 (352)
Q Consensus       269 ~~i~~~~~~~~~~~~-~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~  347 (352)
                      ++++++++.....+. ......|+++.+++..++.  +..+++++|.+++.++++||+|||++|++|++|+|++||++|+
T Consensus       250 ~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~  327 (516)
T PLN03195        250 SVIRRRKAEMDEARKSGKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAE  327 (516)
T ss_pred             HHHHHHHHHHhccccccccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHH
Confidence            888888765311000 1123579999999764321  3469999999999999999999999999999999999999999


Q ss_pred             HhhhC
Q 048567          348 KATEE  352 (352)
Q Consensus       348 kl~~E  352 (352)
                      |||+|
T Consensus       328 kl~~E  332 (516)
T PLN03195        328 KLYSE  332 (516)
T ss_pred             HHHHH
Confidence            99997


No 22 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=7.3e-39  Score=306.54  Aligned_cols=294  Identities=31%  Similarity=0.500  Sum_probs=230.8

Q ss_pred             CCCCCCCCcccccccCC--CCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCcccccccc--c
Q 048567           44 PPGPKPWPLIGNLNLIG--QLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPALLAGKH--A  119 (352)
Q Consensus        44 ~PGp~~~pi~G~l~~~~--~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~~~~~~~--~  119 (352)
                      ||||+++|++||++++.  +.++..+.+|+++|||||++++|+.++++|+||+++++|+.+++..|..++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999984  5678889999999999999999999999999999999999999877776543222221  1


Q ss_pred             ccCCceeEecCCChhHHHhhhhhhhhcCChh-hhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHHHHHH
Q 048567          120 NFNYLVMATAPYGPHWRQTRKTFKTQILSPK-RLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYMFNLATM  198 (352)
Q Consensus       120 ~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~-~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~t~~vi  198 (352)
                      ...+.++.+. +|+.|+++|+++. +.|+.. ++ .+.+.+++.++.+++.|.+.    ...++++|+.+.+..+++|++
T Consensus        81 ~~~~~~l~~~-~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~----~~~~~~vd~~~~~~~~~~d~i  153 (463)
T PF00067_consen   81 PFGGKGLFFS-DGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKK----AGSSGPVDLFDWLRRFALDVI  153 (463)
T ss_dssp             HHTTTSSTTS-SHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHT----TTSESEEEHHHHHHHHHHHHH
T ss_pred             cccccccccc-ccccccccccccc-ccccccccc-cccccccccccccccccccc----ccccceeeeeccccccccccc
Confidence            1234555544 4899999999996 677777 66 89999999999999999875    233347999999999999999


Q ss_pred             HHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCC--CcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 048567          199 SRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGIL--DIGDAIPWLAFLDLQGNVKRMKAVKKKADKFYEHVLDEHER  276 (352)
Q Consensus       199 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  276 (352)
                      +.++||.+++..+.   .....+.+.+.++.......  .+...+|++.++ .....++..++.+.+.+++..+++++++
T Consensus       154 ~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~  229 (463)
T PF00067_consen  154 GRVLFGKDFGSLDD---EDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERRE  229 (463)
T ss_dssp             HHHHHSSHHHGTTH---HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccceeeeccc---cccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence            99999999874331   23445666666665433221  123456766665 2334566777888899999999999887


Q ss_pred             HhccccCCCCCCccHHHHHHhcc-CCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhhhC
Q 048567          277 HAKRKSFNEHGTKDMVDVLLQLA-DDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKATEE  352 (352)
Q Consensus       277 ~~~~~~~~~~~~~d~l~~lL~~~-~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~~E  352 (352)
                      .. ..  ......|+++.+|... +.++ +..+++++|.+++.++++||+|||+++++|++++|++||++|+||++|
T Consensus       230 ~~-~~--~~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~E  302 (463)
T PF00067_consen  230 EL-DD--GDESRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREE  302 (463)
T ss_dssp             SH-HS--SSSSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             cc-cc--ccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            66 21  1246789999999986 3221 237999999999999999999999999999999999999999999987


No 23 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.8e-37  Score=284.29  Aligned_cols=296  Identities=21%  Similarity=0.296  Sum_probs=234.6

Q ss_pred             CCCCCCCCCcccccccC----CCCCcHHHHHHHhhcCCeeEEe-ecCeeEEEeCCHHHHHHHHhhCCcccCCCc-ccccc
Q 048567           43 PPPGPKPWPLIGNLNLI----GQLPHVSLHSLSQKYGPIIQLK-FGLETVVVASSAEVAELILKTHDLTFASRP-ALLAG  116 (352)
Q Consensus        43 ~~PGp~~~pi~G~l~~~----~~~~~~~~~~~~~kYG~i~~i~-~g~~~~vvv~~~~~i~eil~~~~~~f~~r~-~~~~~  116 (352)
                      .+|||+++|++|.++..    ..+.|+...+.+++|||||+.. +|+.+.|.+.+|+.++.++.+++. +.-|| .....
T Consensus        51 ~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~~~w  129 (519)
T KOG0159|consen   51 EIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLIEPW  129 (519)
T ss_pred             hcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccccchh
Confidence            68999999999999844    2467888999999999999999 899999999999999999998873 56675 21111


Q ss_pred             ---cccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHH
Q 048567          117 ---KHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYMF  193 (352)
Q Consensus       117 ---~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~  193 (352)
                         +.. .++.+.++..+|++|++.|..+++.+++|+.++.|.|.++..+++++..+.+.+.. ..+..+.|+.+.+.++
T Consensus       130 ~~~rd~-~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~-~~~~~~~D~~~~l~~w  207 (519)
T KOG0159|consen  130 VAYRDF-RGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDP-ERGELVPDFAQELYRW  207 (519)
T ss_pred             hhhHHh-hccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcc-cccccchhHHHHHHHH
Confidence               222 23333455667999999999998778999999999999999999999999876411 1245588999999999


Q ss_pred             HHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCccccc-ccccccCccchHHHHHHHHHHHHHHHHHHHH
Q 048567          194 NLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAI-PWLAFLDLQGNVKRMKAVKKKADKFYEHVLD  272 (352)
Q Consensus       194 t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~  272 (352)
                      +++.||.++||.+++......+++...+.+++..++..+....   +. ++++++ .++.+|++-++-+.+.++...+|+
T Consensus       208 slEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~---~~p~l~r~~-~t~~wk~~~~~~D~i~~~~~~~Id  283 (519)
T KOG0159|consen  208 SLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLM---LMPSLWRYF-PTKVWKDFVRAWDQIFDVGDKYID  283 (519)
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHH---hcchHHHhC-CChHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987654445678889999999987654332   33 455666 456678899999999999999999


Q ss_pred             HHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhhhC
Q 048567          273 EHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKATEE  352 (352)
Q Consensus       273 ~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~~E  352 (352)
                      ...+..+.+...+.+...++-.+|..       +.++.+++..+++++++||.||||+|+.|++|+|++||++|+|+++|
T Consensus       284 ~~l~~l~~~~~~~~~~~~~l~~~L~~-------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~E  356 (519)
T KOG0159|consen  284 NALEELEKQDSAGSEYTGSLLELLLR-------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREE  356 (519)
T ss_pred             HHHHHHHhccccccchhHHHHHHHHH-------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHH
Confidence            88877622111112333444444442       24788999999999999999999999999999999999999999998


No 24 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=3.6e-36  Score=288.89  Aligned_cols=281  Identities=20%  Similarity=0.209  Sum_probs=202.3

Q ss_pred             CcCCCCCCCCCCCCCcccccccCC-----CCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCc
Q 048567           37 NKLNLLPPPGPKPWPLIGNLNLIG-----QLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRP  111 (352)
Q Consensus        37 ~~~~~~~~PGp~~~pi~G~l~~~~-----~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~  111 (352)
                      ++++  +||||+++|++||++++.     ..++..+.+|+++||+||++++|+.++||++||++++++|.+++..|+.+.
T Consensus         4 ~~~~--~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          4 KKSR--LPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCC--CCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            5566  899999999999999872     357788899999999999999999999999999999999999887777653


Q ss_pred             ccccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhh-HHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHH
Q 048567          112 ALLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQS-EYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRL  190 (352)
Q Consensus       112 ~~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~-~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~  190 (352)
                      ... ...+. ++.++. ..+|+.||++|+++. +.|+..++..+ .+.+.+.++.+++.+        ..++++|+.+.+
T Consensus        82 ~~~-~~~l~-g~~~~~-~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~  149 (452)
T PLN03141         82 PKS-LTELM-GKSSIL-LINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSW--------RDDPPVLVQDET  149 (452)
T ss_pred             chh-HHHHh-Cccccc-ccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhc--------cCCCCEEhHHHH
Confidence            211 11221 222444 456999999999986 67877766543 445544444444433        135679999999


Q ss_pred             HHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHH
Q 048567          191 YMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKRMKAVKKKADKFYEHV  270 (352)
Q Consensus       191 ~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~  270 (352)
                      ..++++++++++||.+.+.       ....+......+.....      .+|+  +++.+. .++..++.+.+.+++..+
T Consensus       150 ~~~~~~vi~~~~~G~~~~~-------~~~~~~~~~~~~~~~~~------~~~~--~~p~~~-~~~~~~~~~~l~~~~~~~  213 (452)
T PLN03141        150 KKIAFEVLVKALISLEPGE-------EMEFLKKEFQEFIKGLM------SLPI--KLPGTR-LYRSLQAKKRMVKLVKKI  213 (452)
T ss_pred             HHHHHHHHHHHHcCCCchH-------HHHHHHHHHHHHhhhHH------hCcc--CCCchH-hHHHHHHHHHHHHHHHHH
Confidence            9999999999999976532       12233333333322111      1221  111111 234456788899999999


Q ss_pred             HHHHHHHhccccC-CCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHh
Q 048567          271 LDEHERHAKRKSF-NEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKA  349 (352)
Q Consensus       271 i~~~~~~~~~~~~-~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl  349 (352)
                      |++++...+.... .+..+.|+++.+++..     +..+++++|..++.++++||+|||+++++|++++|++||++|+|+
T Consensus       214 i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl  288 (452)
T PLN03141        214 IEEKRRAMKNKEEDETGIPKDVVDVLLRDG-----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQL  288 (452)
T ss_pred             HHHHHHHHhccCccccCChhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHH
Confidence            9888765411000 0012579999999753     235899999999999999999999999999999999999999999


Q ss_pred             hhC
Q 048567          350 TEE  352 (352)
Q Consensus       350 ~~E  352 (352)
                      ++|
T Consensus       289 ~~E  291 (452)
T PLN03141        289 TEE  291 (452)
T ss_pred             HHH
Confidence            987


No 25 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=5.3e-36  Score=295.83  Aligned_cols=283  Identities=17%  Similarity=0.222  Sum_probs=199.9

Q ss_pred             ccccccC-CCCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCcccccccccccCCceeEecCC
Q 048567           53 IGNLNLI-GQLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPALLAGKHANFNYLVMATAPY  131 (352)
Q Consensus        53 ~G~l~~~-~~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~~~~~~~~~~~g~~~~~~~~  131 (352)
                      +||+..+ .+..+..+.+|+++|||||++++|+.++|+++||+.+++|+.+++..|.+++.......  ..+.++++ .+
T Consensus       142 ~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~--~~g~~l~~-~d  218 (633)
T PLN02738        142 KGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEF--VMGKGLIP-AD  218 (633)
T ss_pred             cCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhh--ccCCceec-CC
Confidence            4666565 45567889999999999999999999999999999999999987766766543211111  12445554 56


Q ss_pred             ChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhccccccc
Q 048567          132 GPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYMFNLATMSRMLLGKRYTEDN  211 (352)
Q Consensus       132 g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~  211 (352)
                      |+.||++|+.+. +.|+.++++.+.+.+.++++.++++|.+.    ...++++|+.+.+..+|+|+|+.++||.+++...
T Consensus       219 ge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~----~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~  293 (633)
T PLN02738        219 GEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAA----ASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLS  293 (633)
T ss_pred             cHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccc
Confidence            999999999996 89999999999999999999999999764    2457789999999999999999999999887432


Q ss_pred             ccchhhHHHHHHHHHHHHHhhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----C-CC
Q 048567          212 QNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKRMKAVKKKADKFYEHVLDEHERHAKRKS-----F-NE  285 (352)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~-~~  285 (352)
                      .. +.....+...+..+............+|++..+  ++..+++.+..+.+..++..+++.++......+     . ..
T Consensus       294 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~  370 (633)
T PLN02738        294 ND-TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMN  370 (633)
T ss_pred             cc-hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccc
Confidence            10 011222222222221111010000112222222  222345555566666666666665443210000     0 01


Q ss_pred             CCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhhhC
Q 048567          286 HGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKATEE  352 (352)
Q Consensus       286 ~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~~E  352 (352)
                      ....|+++.|++..      ..+++++|.+++.++++||+||||++|+|++|+|++||++|+|||+|
T Consensus       371 ~~~~dil~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreE  431 (633)
T PLN02738        371 ERDPSILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEE  431 (633)
T ss_pred             cccchHHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            23468999999752      24899999999999999999999999999999999999999999997


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=2.7e-35  Score=285.95  Aligned_cols=281  Identities=21%  Similarity=0.248  Sum_probs=205.3

Q ss_pred             CcCCCCCCCCCCCCCcccccccC-----CCCCcHHHHHHHhhcCC--eeEEeecCeeEEEeCCHHHHHHHHhhCCcccCC
Q 048567           37 NKLNLLPPPGPKPWPLIGNLNLI-----GQLPHVSLHSLSQKYGP--IIQLKFGLETVVVASSAEVAELILKTHDLTFAS  109 (352)
Q Consensus        37 ~~~~~~~~PGp~~~pi~G~l~~~-----~~~~~~~~~~~~~kYG~--i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~  109 (352)
                      ++.+  +||||+++|++||++++     .++++..+.+++++||+  +|++++|+.++|+++||+++++++.+++ .|.+
T Consensus        39 ~~~~--lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~  115 (490)
T PLN02302         39 GQPP--LPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEP  115 (490)
T ss_pred             CCCC--CcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-cccc
Confidence            3445  89999999999999876     23578889999999997  7999999999999999999999998764 4554


Q ss_pred             CcccccccccccCCceeEecCCChhHHHhhhhhhhhcC-ChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHH
Q 048567          110 RPALLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQIL-SPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKD  188 (352)
Q Consensus       110 r~~~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~  188 (352)
                      +........   .|.+.++..+|+.|+++||.+. +.| ++++++.+.+.++++++.+++.+..        ++.+|+.+
T Consensus       116 ~~~~~~~~~---~g~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--------~~~v~~~~  183 (490)
T PLN02302        116 GWPESTVEL---IGRKSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK--------MGEIEFLT  183 (490)
T ss_pred             CCchhHHHH---hccccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC--------CCCEehHH
Confidence            322111111   1223333446999999999996 667 5788999999999999999988742        23699999


Q ss_pred             HHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccCccchHHHHHHHHHHHHHHHH
Q 048567          189 RLYMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKRMKAVKKKADKFYE  268 (352)
Q Consensus       189 ~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~  268 (352)
                      .+..+++++++.++||.+....       ...+......+......  ....+|.      .. .++..++.+.+.+++.
T Consensus       184 ~~~~~~~~vi~~~~~G~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~~p~------~~-~~~~~~~~~~l~~~~~  247 (490)
T PLN02302        184 ELRKLTFKIIMYIFLSSESELV-------MEALEREYTTLNYGVRA--MAINLPG------FA-YHRALKARKKLVALFQ  247 (490)
T ss_pred             HHHHHHHHHHHHHHcCCCChHH-------HHHHHHHHHHHHHHhhh--CCcCCCc------hh-hHHHHHHHHHHHHHHH
Confidence            9999999999999999875431       12222222211111100  0001121      11 2344456677888888


Q ss_pred             HHHHHHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHH
Q 048567          269 HVLDEHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQK  348 (352)
Q Consensus       269 ~~i~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~k  348 (352)
                      ..++++++.. .. .......|+++.+++..+++  +..+++++|.+++.++++||+|||+++++|++++|++||++|+|
T Consensus       248 ~~i~~~~~~~-~~-~~~~~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~k  323 (490)
T PLN02302        248 SIVDERRNSR-KQ-NISPRKKDMLDLLLDAEDEN--GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQK  323 (490)
T ss_pred             HHHHHHHHhh-hc-cCCCCcCCHHHHHHhhhccC--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHH
Confidence            8888876543 11 11134679999999865432  34689999999999999999999999999999999999999999


Q ss_pred             hhhC
Q 048567          349 ATEE  352 (352)
Q Consensus       349 l~~E  352 (352)
                      +|+|
T Consensus       324 l~~E  327 (490)
T PLN02302        324 AKAE  327 (490)
T ss_pred             HHHH
Confidence            9987


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.3e-35  Score=285.51  Aligned_cols=284  Identities=16%  Similarity=0.175  Sum_probs=203.5

Q ss_pred             HHhhhhhcCcCCCCCCCCCCCCCcccccccC-C----CCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhC
Q 048567           29 LFHRLFSRNKLNLLPPPGPKPWPLIGNLNLI-G----QLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTH  103 (352)
Q Consensus        29 ~~~~~~~~~~~~~~~~PGp~~~pi~G~l~~~-~----~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~  103 (352)
                      ++.++...++.+  +||||.++|++||++++ .    .+++..+.+|+++||++|++++|+.++|+++||+++++++.++
T Consensus        19 ~~~~~~~~~~~~--lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~   96 (472)
T PLN02987         19 LLLRRTRYRRMR--LPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNE   96 (472)
T ss_pred             HHHHhhccCCCC--CcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCC
Confidence            333343345566  78999999999999886 2    3467788999999999999999999999999999999999998


Q ss_pred             CcccCCCcccccccccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 048567          104 DLTFASRPALLAGKHANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTP  183 (352)
Q Consensus       104 ~~~f~~r~~~~~~~~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~  183 (352)
                      ...|..+........+  ++.|+++. +|+.||++||++. ++++.+.++.+.   ..++.++++...+.|      +++
T Consensus        97 ~~~f~~~~~~~~~~~l--g~~~l~~~-~g~~wr~~R~~~~-~f~~~~~~~~~~---~~~~~~~~~~~~~~~------~~~  163 (472)
T PLN02987         97 GKLFECSYPGSISNLL--GKHSLLLM-KGNLHKKMHSLTM-SFANSSIIKDHL---LLDIDRLIRFNLDSW------SSR  163 (472)
T ss_pred             CceEEecCcHHHHHHh--Cccccccc-CcHHHHHHHHHHH-HhcChHHHHHHH---HHHHHHHHHHHHHhh------ccc
Confidence            8778655322111222  23456555 6999999999974 544555554432   233445544433321      136


Q ss_pred             cchHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccCccchHHHHHHHHHHH
Q 048567          184 VHLKDRLYMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKRMKAVKKKA  263 (352)
Q Consensus       184 vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~  263 (352)
                      +++.+.+.+++++++++++||.+.+..       .+.+...+.......    ....+|++.     +.+++..+..+++
T Consensus       164 v~~~~~~~~~t~~vi~~~~fg~~~~~~-------~~~~~~~~~~~~~~~----~~~~~p~l~-----~~~~~~~~~~~~~  227 (472)
T PLN02987        164 VLLMEEAKKITFELTVKQLMSFDPGEW-------TESLRKEYVLVIEGF----FSVPLPLFS-----TTYRRAIQARTKV  227 (472)
T ss_pred             eehHHHHHHHHHHHHHHHHcCCCChHH-------HHHHHHHHHHHHhhh----hcCCCcCCC-----chHHHHHHHHHHH
Confidence            999999999999999999999865421       122222222221111    122345431     2246677888999


Q ss_pred             HHHHHHHHHHHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhCh
Q 048567          264 DKFYEHVLDEHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNP  343 (352)
Q Consensus       264 ~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~P  343 (352)
                      .+++..+|+++++.. ..  +.....|+++.|++..      ..+++++|.+++.++++||+|||+++++|++++|++||
T Consensus       228 ~~~~~~~i~~r~~~~-~~--~~~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P  298 (472)
T PLN02987        228 AEALTLVVMKRRKEE-EE--GAEKKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETP  298 (472)
T ss_pred             HHHHHHHHHHHHhhh-hc--cCcccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhCh
Confidence            999999998887644 10  1124579999999752      24899999999999999999999999999999999999


Q ss_pred             HHHHHhhhC
Q 048567          344 RVIQKATEE  352 (352)
Q Consensus       344 evq~kl~~E  352 (352)
                      ++|+|+++|
T Consensus       299 ~~~~~l~~E  307 (472)
T PLN02987        299 LALAQLKEE  307 (472)
T ss_pred             HHHHHHHHH
Confidence            999999987


No 28 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=5e-35  Score=283.39  Aligned_cols=290  Identities=16%  Similarity=0.213  Sum_probs=215.1

Q ss_pred             CCCCCCCCCcccccccC-----CCCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCccccccc
Q 048567           43 PPPGPKPWPLIGNLNLI-----GQLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPALLAGK  117 (352)
Q Consensus        43 ~~PGp~~~pi~G~l~~~-----~~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~~~~~~  117 (352)
                      +--|-.|||++|+.++.     .+.++..+.+|+++|||||++++|+.++|+++||+++++|+.+.+..|.+++......
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            56788999999987775     3567889999999999999999999999999999999999998777787664322111


Q ss_pred             ccccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHH-HHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHHHH
Q 048567          118 HANFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEY-IRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYMFNLA  196 (352)
Q Consensus       118 ~~~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~t~~  196 (352)
                      .+  .+.++++ .+|+.||++||+++ +.|+.+++.++.+ ++.++++.+++.|.+.    ..+++++|+.+.+.++++|
T Consensus        93 ~~--~~~~i~~-~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~----~~~g~~vd~~~~~~~~~~d  164 (489)
T PLN02936         93 FL--FGSGFAI-AEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPV----ALSGEAVNMEAKFSQLTLD  164 (489)
T ss_pred             HH--hcCcccc-CCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCCceeHHHHHHHHHHH
Confidence            11  2345554 56999999999985 8899888888755 7888999999999764    2356789999999999999


Q ss_pred             HHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccc--c-CccchHHHHHHHHHHHHHHHHHHHHH
Q 048567          197 TMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAF--L-DLQGNVKRMKAVKKKADKFYEHVLDE  273 (352)
Q Consensus       197 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--l-~~~~~~~~~~~~~~~~~~~~~~~i~~  273 (352)
                      +||.++||.+++....    . .++...+...+..... .....+|++..  + ...+..++..++.+.+.+++.+++++
T Consensus       165 vi~~~~fG~~~~~~~~----~-~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~  238 (489)
T PLN02936        165 VIGLSVFNYNFDSLTT----D-SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDK  238 (489)
T ss_pred             HHHHHHcCCCcccccc----C-cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999875431    1 2233333333222111 11223443211  1 01123456677788888898888888


Q ss_pred             HHHHhccccCC-------CCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHH
Q 048567          274 HERHAKRKSFN-------EHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVI  346 (352)
Q Consensus       274 ~~~~~~~~~~~-------~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq  346 (352)
                      +++........       +....|+++.|++..+      .+++++|.+++.++++||+||||++|+|++|+|++||++|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~  312 (489)
T PLN02936        239 CKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEAL  312 (489)
T ss_pred             HHHHHhhcccccccccccccCchHHHHHHHhccc------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHH
Confidence            77543110000       1234789999997532      4889999999999999999999999999999999999999


Q ss_pred             HHhhhC
Q 048567          347 QKATEE  352 (352)
Q Consensus       347 ~kl~~E  352 (352)
                      +|+|+|
T Consensus       313 ~kl~~E  318 (489)
T PLN02936        313 RKAQEE  318 (489)
T ss_pred             HHHHHH
Confidence            999997


No 29 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.98  E-value=2.2e-30  Score=251.14  Aligned_cols=278  Identities=17%  Similarity=0.147  Sum_probs=197.5

Q ss_pred             CCCcccccccCCCCCcHHHHHHHhhcC-CeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCcccc-cccccccCCcee
Q 048567           49 PWPLIGNLNLIGQLPHVSLHSLSQKYG-PIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPALL-AGKHANFNYLVM  126 (352)
Q Consensus        49 ~~pi~G~l~~~~~~~~~~~~~~~~kYG-~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~~~-~~~~~~~~g~~~  126 (352)
                      ..++.|++.....+.+..+..+.++|+ .+++++.++.  ++++||+++++|+.++..+|.+.+... ....+  .|.|+
T Consensus        48 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~--~g~gi  123 (502)
T PLN02426         48 RAYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL--LGRGI  123 (502)
T ss_pred             CCCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh--cCCce
Confidence            466889887653446777777888887 5777775443  899999999999998776776433221 11111  24566


Q ss_pred             EecCCChhHHHhhhhhhhhcCChhhhhhhH--HHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHHHHHHHHHHHh
Q 048567          127 ATAPYGPHWRQTRKTFKTQILSPKRLVQSE--YIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYMFNLATMSRMLLG  204 (352)
Q Consensus       127 ~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~--~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG  204 (352)
                      .+ .+|+.||++||++. +.|+.++++.+.  +.+++.++.+++.|.+..  ....++++|+.+.++++|+|+||.++||
T Consensus       124 ~~-~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~vd~~~~~~~~t~dvi~~~~fG  199 (502)
T PLN02426        124 FN-VDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAA--DDGEGAVLDLQDVFRRFSFDNICKFSFG  199 (502)
T ss_pred             ee-cCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCCCceEcHHHHHHHHHHHHHHHHHhC
Confidence            54 56999999999985 889999888774  677777788888886531  0122467999999999999999999999


Q ss_pred             cccccccccchhhHHHHHHHHHHHHHhhcCCCccccccccc----ccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 048567          205 KRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLA----FLDLQGNVKRMKAVKKKADKFYEHVLDEHERHAKR  280 (352)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~----~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  280 (352)
                      .+++..+..  ....++.++++.+....... ....+|+++    +++ .+..+++.+..+.+.+++.++|+++++..  
T Consensus       200 ~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~I~~r~~~~--  273 (502)
T PLN02426        200 LDPGCLELS--LPISEFADAFDTASKLSAER-AMAASPLLWKIKRLLN-IGSERKLKEAIKLVDELAAEVIRQRRKLG--  273 (502)
T ss_pred             CCCcccCCC--CCccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhcc-cchhHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence            988654310  11234444444433221110 011223222    221 23356777888899999999998876532  


Q ss_pred             ccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhhhC
Q 048567          281 KSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKATEE  352 (352)
Q Consensus       281 ~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~~E  352 (352)
                          .....|+++.+++..        .+++++.+++.++++||+||||++|+|++|+|++||++|+|+++|
T Consensus       274 ----~~~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~E  333 (502)
T PLN02426        274 ----FSASKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREE  333 (502)
T ss_pred             ----cCCcchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence                124579999999742        267899999999999999999999999999999999999999997


No 30 
>PLN02648 allene oxide synthase
Probab=99.94  E-value=2e-26  Score=221.13  Aligned_cols=263  Identities=13%  Similarity=0.100  Sum_probs=172.2

Q ss_pred             CCCCCCCCCcccccccC-----CCCCcHHHHHHHhhcCC-eeEEeecCeeE-------EEeCCHHHHHHHHhh----CCc
Q 048567           43 PPPGPKPWPLIGNLNLI-----GQLPHVSLHSLSQKYGP-IIQLKFGLETV-------VVASSAEVAELILKT----HDL  105 (352)
Q Consensus        43 ~~PGp~~~pi~G~l~~~-----~~~~~~~~~~~~~kYG~-i~~i~~g~~~~-------vvv~~~~~i~eil~~----~~~  105 (352)
                      .|||+.|||++|.+.++     ..++..++.+..+|||+ ||++++++.|+       |+++||++++.+|.+    +..
T Consensus        18 ~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~~   97 (480)
T PLN02648         18 EIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKRD   97 (480)
T ss_pred             CCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccccc
Confidence            69999999999999865     23457889999999999 99999987555       999999999999975    433


Q ss_pred             ccCCCcccccccccccCCc--eeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 048567          106 TFASRPALLAGKHANFNYL--VMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTP  183 (352)
Q Consensus       106 ~f~~r~~~~~~~~~~~~g~--~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~  183 (352)
                      .|..... .... + .++.  -+++..+|+.|+++||++. +.|+. +++.|.+.|.+.+..+++.|...    ...+++
T Consensus        98 ~~~~~~~-~~~~-l-~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~~-~~~~~~~~m~~~~~~~~~~w~~~----~~~~~~  168 (480)
T PLN02648         98 VFTGTYM-PSTA-F-TGGYRVLSYLDPSEPKHAKLKSFLF-ELLKS-RHRRFIPEFRAAFAELFDTWEAE----LAKKGK  168 (480)
T ss_pred             cceeeec-cCcc-c-cCCceeeeecCCCCchHHHHHHHHH-HHHHH-hhhhhhhHHHHHHHHHHHHHHHH----HhhCCC
Confidence            3433111 1112 2 1222  1445567999999999996 88984 67889999999999999999542    124457


Q ss_pred             cchHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccCccchHHH--------
Q 048567          184 VHLKDRLYMFNLATMSRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKR--------  255 (352)
Q Consensus       184 vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~--------  255 (352)
                      +|+.+.++++|+|+++.++||.+.+...     ..+.+......+...       ..+|..+.. .+...++        
T Consensus       169 vdv~~~~~~lt~~vi~~~lfG~~~~~~~-----l~~~~~~~~~~~~~~-------~~~p~~~~~-l~~~~~~~i~~~~~~  235 (480)
T PLN02648        169 AEFNDPLDQMAFNFLCKALTGKDPSETA-----LGSDGPALIQKWLAL-------QLAPLASTG-LPHVLEELLLHTFPL  235 (480)
T ss_pred             ccccchHHHHHHHHHHHHHcCCCcchhh-----hccchhHHHHHHHHH-------HhhHHHHcC-chHHHHHHhhcccCC
Confidence            9999999999999999999998655411     111122222221110       011211110 0000000        


Q ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHH-HhcccccchHH
Q 048567          256 ----MKAVKKKADKFYEHVLDEHERHAKRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQD-LLLGGIETSAI  330 (352)
Q Consensus       256 ----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~-l~~aG~dTta~  330 (352)
                          ..+..+.+.+++.                     +.++.+++..++    ..++++|+.++++. +.++|++||++
T Consensus       236 ~~~~~~~~~~~~~~~~~---------------------~~~~~ll~~~~~----~~l~~~ei~~~~l~~~~~~t~~~~~~  290 (480)
T PLN02648        236 PFFLVKSDYDKLYDFFR---------------------ASATEALDLAEK----FGISREEALHNLLFVLGFNAFGGFKI  290 (480)
T ss_pred             chhhhhccHHHHHHHHH---------------------HHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHhhHHHHH
Confidence                0000011111111                     112234433221    23999999999875 34567777788


Q ss_pred             HHHHHHHHHhhChH-HHHHhhhC
Q 048567          331 TTEWAMSELLKNPR-VIQKATEE  352 (352)
Q Consensus       331 tl~~~l~~L~~~Pe-vq~kl~~E  352 (352)
                      +++|++|+|++||+ +|+|+++|
T Consensus       291 ~l~~~l~~L~~~p~~v~~klr~E  313 (480)
T PLN02648        291 FFPALLKWVGRAGEELQARLAEE  313 (480)
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHH
Confidence            99999999999995 99999998


No 31 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.93  E-value=1.6e-24  Score=204.95  Aligned_cols=248  Identities=21%  Similarity=0.245  Sum_probs=184.0

Q ss_pred             cHHHHHHHhhcCCeeEEeecCee--EEEeCCHHHHHHHHhhCCcccCCCccccccc--ccccCCceeEecCCChhHHHhh
Q 048567           64 HVSLHSLSQKYGPIIQLKFGLET--VVVASSAEVAELILKTHDLTFASRPALLAGK--HANFNYLVMATAPYGPHWRQTR  139 (352)
Q Consensus        64 ~~~~~~~~~kYG~i~~i~~g~~~--~vvv~~~~~i~eil~~~~~~f~~r~~~~~~~--~~~~~g~~~~~~~~g~~Wk~~R  139 (352)
                      ......+.+.||.+++++..+..  ++++++++.+++++.++. .++++.......  .....|.+.++..+|+.|+++|
T Consensus        25 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~R  103 (411)
T COG2124          25 RFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLR  103 (411)
T ss_pred             hhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHH
Confidence            34455678889998887754333  799999999999998874 222222111111  1112234435556799999999


Q ss_pred             hhhhhhcCChhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhcccccccccchhhHH
Q 048567          140 KTFKTQILSPKRLVQSEYIRVEERKALLFKMYKSSSSSSPSSTPVHLKDRLYMFNLATMSRMLLGKRYTEDNQNNIVTAK  219 (352)
Q Consensus       140 r~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~  219 (352)
                      |+++ +.|+++.++++.+.|.+.++++++.+ +.      + +..++.+....+++++|| .+||...+...        
T Consensus       104 kl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~~------~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~--------  165 (411)
T COG2124         104 KLLA-PAFTPRALRGYRPLIREIADRLLDDL-WQ------G-GADLVLDFAAELTLRVIA-ELLGVPLEDRP--------  165 (411)
T ss_pred             HHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-cc------C-CchhHHHHhhhhhHHHHH-HHhCCCHHHHH--------
Confidence            9996 89999999999999999999999998 42      3 678899999999999999 99998765421        


Q ss_pred             HHHHHHHHHHHhhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHhcc
Q 048567          220 EFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKRMKAVKKKADKFYEHVLDEHERHAKRKSFNEHGTKDMVDVLLQLA  299 (352)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~lL~~~  299 (352)
                      .+..........        ..|....   .....+..++...+.+++..+|++++  .       .+..|+++.|+...
T Consensus       166 ~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~~a~~~~~~~~~~li~~rR--~-------~~~~dlls~l~~a~  225 (411)
T COG2124         166 QLLRWSDALLLR--------LDPDLGP---EEPWRRARAARRELDAYLRALIAERR--A-------APRDDLLSLLLSAE  225 (411)
T ss_pred             HHHHHHHHHHhc--------cCcccCC---cccHHHHHHHHHHHHHHHHHHHHHhc--c-------CCcccHHHHHHHHh
Confidence            222222211110        0022111   11235667888899999999998886  2       56789999999987


Q ss_pred             CCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhhhC
Q 048567          300 DDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKATEE  352 (352)
Q Consensus       300 ~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~~E  352 (352)
                      +++  +..+|++||.++++++++||||||+++|+|++|.|++||++++++++|
T Consensus       226 ~~~--~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e  276 (411)
T COG2124         226 DDG--GGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAE  276 (411)
T ss_pred             hCC--CCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhC
Confidence            653  226999999999999999999999999999999999999999999886


No 32 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93  E-value=3.5e-24  Score=194.26  Aligned_cols=278  Identities=18%  Similarity=0.198  Sum_probs=201.8

Q ss_pred             CCCCCCC-CCcccccccCCCCCcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhCCcccCCCccccccccc--
Q 048567           43 PPPGPKP-WPLIGNLNLIGQLPHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTHDLTFASRPALLAGKHA--  119 (352)
Q Consensus        43 ~~PGp~~-~pi~G~l~~~~~~~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~~~~f~~r~~~~~~~~~--  119 (352)
                      .||--++ .|++|...++++++..++.+..+|||+||++.++|..+.++.+|+....++......++-+.   ....+  
T Consensus        32 ~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~---~~~~l~~  108 (486)
T KOG0684|consen   32 EPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEE---AYSKLTT  108 (486)
T ss_pred             CCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHH---HHHHhhh
Confidence            4776665 69999999999999999999999999999999999999999999999999876533332111   11111  


Q ss_pred             ccCCceeEecCCChhHHHhhhhhhhhcCChhhhhhhHHHHHHHHHHHHHH-HHhcCCCCCCCCCCcchHHHHHHHHHHHH
Q 048567          120 NFNYLVMATAPYGPHWRQTRKTFKTQILSPKRLVQSEYIRVEERKALLFK-MYKSSSSSSPSSTPVHLKDRLYMFNLATM  198 (352)
Q Consensus       120 ~~~g~~~~~~~~g~~Wk~~Rr~~~~~~fs~~~l~~~~~~i~~~~~~l~~~-l~~~~~~~~~~~~~vd~~~~~~~~t~~vi  198 (352)
                      ..-|.|++..-.++..-.+.+.+. ..+....++++.+.|.++..+.++. |.+        ....|....+...++=.+
T Consensus       109 ~vFg~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~--------s~~~d~l~~~~~~ii~tA  179 (486)
T KOG0684|consen  109 PVFGKGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE--------SGETDGLYTFCRLIIFTA  179 (486)
T ss_pred             hhcCCCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc--------ccchhHhhhhhHHHhhhh
Confidence            123566766555666677777774 6788899999999999998877766 322        335565556666666666


Q ss_pred             HHHHHhcccccccccchhhHHHHHHHHHHHHHhhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048567          199 SRMLLGKRYTEDNQNNIVTAKEFTEIVDEVFFISGILDIGDAIPWLAFLDLQGNVKRMKAVKKKADKFYEHVLDEHERHA  278 (352)
Q Consensus       199 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  278 (352)
                      +.++.|.+.-..      ..........++...+..  +...||.  +++.+. .++..++++.+.+.+...|.++++..
T Consensus       180 s~~ll~~e~r~~------~d~~~a~l~~dLd~~F~~--~d~~FP~--~LP~~~-~r~~~ra~~~i~k~f~~~i~~rr~s~  248 (486)
T KOG0684|consen  180 SRLLLGGEVRDQ------LDADVAKLYHDLDQGFQP--FDFLFPY--NLPIPL-LRRRDRARKKISKIFSKIILDRRASI  248 (486)
T ss_pred             HHHhhhhhhhhh------hcchHHHHHHHHhccccc--hHhhccc--CCCcch-hhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence            666666543221      112233445555544433  2345774  443333 34556888899999998888887655


Q ss_pred             ccccCCCCCCccHHHHHHhccCCCCcCCCCCHHHHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhhhC
Q 048567          279 KRKSFNEHGTKDMVDVLLQLADDPTLEVKVERDHIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKATEE  352 (352)
Q Consensus       279 ~~~~~~~~~~~d~l~~lL~~~~~~~~~~~~~~~~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~~E  352 (352)
                            .....|+++.+++ ...+  +.+.+++|+....+.++.||..||+.|..|++++|++|||+|+.+++|
T Consensus       249 ------s~~~~dmlq~l~~-~y~d--g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE  313 (486)
T KOG0684|consen  249 ------SKWDNDMLQSLME-KYKD--GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREE  313 (486)
T ss_pred             ------ccccHHHHHHHHH-Hhhc--CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHH
Confidence                  2355689999998 3332  567999999999999999999999999999999999999999999987


No 33 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=79.34  E-value=8.6  Score=28.64  Aligned_cols=58  Identities=26%  Similarity=0.277  Sum_probs=40.4

Q ss_pred             CCCCCCCCCcccccccCCCCCcHHHHHHHhhcCCeeEEeecC------eeEEEeCCHHHHHHHHhh
Q 048567           43 PPPGPKPWPLIGNLNLIGQLPHVSLHSLSQKYGPIIQLKFGL------ETVVVASSAEVAELILKT  102 (352)
Q Consensus        43 ~~PGp~~~pi~G~l~~~~~~~~~~~~~~~~kYG~i~~i~~g~------~~~vvv~~~~~i~eil~~  102 (352)
                      +||-...+-++-||+.-  -...-+-+++-+||+|..|++|.      .-+||-.|-..++.+...
T Consensus        13 lppevnriLyirNLp~~--ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   13 LPPEVNRILYIRNLPFK--ITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CChhhheeEEEecCCcc--ccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            55555556666666431  12344567888999999999985      347787888888888765


No 34 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=64.65  E-value=13  Score=26.60  Aligned_cols=8  Identities=50%  Similarity=0.866  Sum_probs=5.2

Q ss_pred             CCCCCccc
Q 048567           47 PKPWPLIG   54 (352)
Q Consensus        47 p~~~pi~G   54 (352)
                      |.--|++|
T Consensus        64 PIYrPvI~   71 (94)
T PF05393_consen   64 PIYRPVIG   71 (94)
T ss_pred             Cccccccc
Confidence            44467787


No 35 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=59.52  E-value=28  Score=22.14  Aligned_cols=35  Identities=23%  Similarity=0.252  Sum_probs=24.9

Q ss_pred             HHHHhhcCCeeEEeecCe----eEEEeCCHHHHHHHHhh
Q 048567           68 HSLSQKYGPIIQLKFGLE----TVVVASSAEVAELILKT  102 (352)
Q Consensus        68 ~~~~~kYG~i~~i~~g~~----~~vvv~~~~~i~eil~~  102 (352)
                      .++..+||+|..+.+...    =.|-..+++.++.+...
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            467789999999886542    24446799998888763


No 36 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=53.44  E-value=13  Score=24.45  Aligned_cols=17  Identities=35%  Similarity=0.622  Sum_probs=14.6

Q ss_pred             HHHHHhhChHHHHHhhh
Q 048567          335 AMSELLKNPRVIQKATE  351 (352)
Q Consensus       335 ~l~~L~~~Pevq~kl~~  351 (352)
                      .+-||.+||++.+|+.+
T Consensus         5 iV~YLv~nPevl~kl~~   21 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKE   21 (57)
T ss_pred             HHHHHHHChHHHHHHHc
Confidence            46799999999999865


No 37 
>PF00076 RRM_1:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);  InterPro: IPR000504 Many eukaryotic proteins containing one or more copies of a putative RNA-binding domain of about 90 amino acids are known to bind single-stranded RNAs [, , ]. The largest group of single strand RNA-binding proteins is the eukaryotic RNA recognition motif (RRM) family that contains an eight amino acid RNP-1 consensus sequence [, ]. RRM proteins have a variety of RNA binding preferences and functions, and include heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing (SR, U2AF, Sxl), protein components of small nuclear ribonucleoproteins (U1 and U2 snRNPs), and proteins that regulate RNA stability and translation (PABP, La, Hu) [, , ]. The RRM in heterodimeric splicing factor U2 snRNP auxiliary factor (U2AF) appears to have two RRM-like domains with specialised features for protein recognition []. The motif also appears in a few single stranded DNA binding proteins. The typical RRM consists of four anti-parallel beta-strands and two alpha-helices arranged in a beta-alpha-beta-beta-alpha-beta fold with side chains that stack with RNA bases. Specificity of RNA binding is determined by multiple contacts with surrounding amino acids. A third helix is present during RNA binding in some cases []. The RRM is reviewed in a number of publications [, , ].; GO: 0003676 nucleic acid binding; PDB: 2RNE_A 2DGO_A 2DO4_A 1YTY_B 2VOO_B 2VOP_A 2VON_B 1ZH5_B 2VOD_A 1S79_A ....
Probab=46.88  E-value=70  Score=20.87  Aligned_cols=49  Identities=27%  Similarity=0.296  Sum_probs=33.0

Q ss_pred             cccccccCCCCCcHHHHHHHhhcCCeeEEeecC--------eeEEEeCCHHHHHHHHhh
Q 048567           52 LIGNLNLIGQLPHVSLHSLSQKYGPIIQLKFGL--------ETVVVASSAEVAELILKT  102 (352)
Q Consensus        52 i~G~l~~~~~~~~~~~~~~~~kYG~i~~i~~g~--------~~~vvv~~~~~i~eil~~  102 (352)
                      ++||++.  .-....+.++..+||++..+++-.        .-+|...+++.++.++..
T Consensus         2 ~v~nlp~--~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~a~V~F~~~~~a~~a~~~   58 (70)
T PF00076_consen    2 YVGNLPP--DVTEEELRDFFSQFGKIESIKVMRNSSGKSKGYAFVEFESEEDAEKALEE   58 (70)
T ss_dssp             EEESETT--TSSHHHHHHHHHTTSTEEEEEEEEETTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred             EEcCCCC--cCCHHHHHHHHHHhhhcccccccccccccccceEEEEEcCHHHHHHHHHH
Confidence            3566543  223456788899999987766533        124557899999999874


No 38 
>PLN03120 nucleic acid binding protein; Provisional
Probab=46.74  E-value=79  Score=27.98  Aligned_cols=58  Identities=16%  Similarity=0.134  Sum_probs=42.4

Q ss_pred             cccccccCCCCCcHHHHHHHhhcCCeeEEeec------CeeEEEeCCHHHHHHHHhhCCcccCCCc
Q 048567           52 LIGNLNLIGQLPHVSLHSLSQKYGPIIQLKFG------LETVVVASSAEVAELILKTHDLTFASRP  111 (352)
Q Consensus        52 i~G~l~~~~~~~~~~~~~~~~kYG~i~~i~~g------~~~~vvv~~~~~i~eil~~~~~~f~~r~  111 (352)
                      ++||+..  .--..-+.+++..||+|..+++.      +.-+|...+++.++.++.-++..+.+|+
T Consensus         8 fVgNLs~--~tTE~dLrefFS~~G~I~~V~I~~d~~~~GfAFVtF~d~eaAe~AllLnG~~l~gr~   71 (260)
T PLN03120          8 KVSNVSL--KATERDIKEFFSFSGDIEYVEMQSENERSQIAYVTFKDPQGAETALLLSGATIVDQS   71 (260)
T ss_pred             EEeCCCC--CCCHHHHHHHHHhcCCeEEEEEeecCCCCCEEEEEeCcHHHHHHHHHhcCCeeCCce
Confidence            4566643  22345677888999999998872      3456778899999999987777777665


No 39 
>PF03908 Sec20:  Sec20;  InterPro: IPR005606 Sec20 is a membrane glycoprotein associated with secretory pathway.
Probab=44.77  E-value=24  Score=25.67  Aligned_cols=21  Identities=14%  Similarity=0.528  Sum_probs=10.9

Q ss_pred             CchHHHHHHHHHHHHHHHHHH
Q 048567           10 SDSVMWYSIILCFPPVLLLLF   30 (352)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~   30 (352)
                      |+..+|+.+.+++++++++++
T Consensus        69 D~~li~~~~~~f~~~v~yI~~   89 (92)
T PF03908_consen   69 DRILIFFAFLFFLLVVLYILW   89 (92)
T ss_pred             hHHHHHHHHHHHHHHHHHHhh
Confidence            344566555555555555544


No 40 
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=44.03  E-value=55  Score=30.07  Aligned_cols=59  Identities=17%  Similarity=0.203  Sum_probs=40.2

Q ss_pred             CcccccccCCCCCcHHHHHHHhhcCCeeEEeecCee---------EEEeCCHHHHHHHHhh-CCcccCCCc
Q 048567           51 PLIGNLNLIGQLPHVSLHSLSQKYGPIIQLKFGLET---------VVVASSAEVAELILKT-HDLTFASRP  111 (352)
Q Consensus        51 pi~G~l~~~~~~~~~~~~~~~~kYG~i~~i~~g~~~---------~vvv~~~~~i~eil~~-~~~~f~~r~  111 (352)
                      -++|||..-  --...+.++..+||+|.++++-..+         +|...+++.+..++.. ++..+.+|+
T Consensus       272 lfV~NL~~~--~~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~lnG~~~~gr~  340 (352)
T TIGR01661       272 IFVYNLSPD--TDETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILSLNGYTLGNRV  340 (352)
T ss_pred             EEEeCCCCC--CCHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHHhCCCEECCeE
Confidence            467777542  2345677888999999998864322         6778888888888764 555555543


No 41 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=43.18  E-value=47  Score=19.77  Aligned_cols=13  Identities=15%  Similarity=0.307  Sum_probs=10.5

Q ss_pred             HhhChHHHHHhhh
Q 048567          339 LLKNPRVIQKATE  351 (352)
Q Consensus       339 L~~~Pevq~kl~~  351 (352)
                      +.+|||+++.++.
T Consensus        23 ~~~HPei~~~i~~   35 (38)
T PF14483_consen   23 CERHPEIQQEIRS   35 (38)
T ss_dssp             HHHSTHHHHHHHT
T ss_pred             HHhChhHHHHHHh
Confidence            3499999998875


No 42 
>PHA02902 putative IMV membrane protein; Provisional
Probab=42.25  E-value=55  Score=21.87  Aligned_cols=7  Identities=14%  Similarity=0.183  Sum_probs=2.7

Q ss_pred             CCCCCCC
Q 048567           45 PGPKPWP   51 (352)
Q Consensus        45 PGp~~~p   51 (352)
                      |+-+.-+
T Consensus        33 P~~~d~~   39 (70)
T PHA02902         33 PDDRDER   39 (70)
T ss_pred             CCCcccc
Confidence            4333333


No 43 
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=39.86  E-value=1e+02  Score=24.47  Aligned_cols=58  Identities=17%  Similarity=0.156  Sum_probs=38.5

Q ss_pred             CcccccccCCCCCcHHHHHHHhhcCCeeEEeec---------CeeEEEeCCHHHHHHHHhh-CCcccCCC
Q 048567           51 PLIGNLNLIGQLPHVSLHSLSQKYGPIIQLKFG---------LETVVVASSAEVAELILKT-HDLTFASR  110 (352)
Q Consensus        51 pi~G~l~~~~~~~~~~~~~~~~kYG~i~~i~~g---------~~~~vvv~~~~~i~eil~~-~~~~f~~r  110 (352)
                      -++|||..-  --...+.++.++||+|..+++-         +.=+|-..+++.++.++.. ++..+.+|
T Consensus        37 lfVgnL~~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~lng~~i~Gr  104 (144)
T PLN03134         37 LFIGGLSWG--TDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGR  104 (144)
T ss_pred             EEEeCCCCC--CCHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHHcCCCEECCE
Confidence            356666532  2356688889999999887753         2235667899999999975 33334444


No 44 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=39.62  E-value=48  Score=25.72  Aligned_cols=39  Identities=13%  Similarity=0.265  Sum_probs=29.2

Q ss_pred             CcHHHHHHHhhcCCeeEEeecCeeEEEeCCHHHHHHHHhhC
Q 048567           63 PHVSLHSLSQKYGPIIQLKFGLETVVVASSAEVAELILKTH  103 (352)
Q Consensus        63 ~~~~~~~~~~kYG~i~~i~~g~~~~vvv~~~~~i~eil~~~  103 (352)
                      .-..+.+|.++||.+--  -.+...+.+.|++.+++++...
T Consensus        76 v~~~i~~w~~~~g~v~l--~~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   76 VEQSIEDWARRYGRVRL--YKGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHhcCCEEE--ecCeEEEEECCHHHHHHHHhCh
Confidence            34578999999998642  1235677799999999998653


No 45 
>PF11395 DUF2873:  Protein of unknown function (DUF2873);  InterPro: IPR021532 This entry is represented by the human SARS coronavirus, Orf7b; it is a family of uncharacterised viral proteins.
Probab=39.59  E-value=59  Score=19.05  Aligned_cols=18  Identities=11%  Similarity=0.410  Sum_probs=9.0

Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 048567           13 VMWYSIILCFPPVLLLLF   30 (352)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~   30 (352)
                      ++.+.++++++.++++.+
T Consensus        13 ~l~~llflv~imliif~f   30 (43)
T PF11395_consen   13 FLSFLLFLVIIMLIIFWF   30 (43)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            344445555555555544


No 46 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=39.37  E-value=15  Score=28.72  Aligned_cols=13  Identities=23%  Similarity=0.340  Sum_probs=5.1

Q ss_pred             HHHHHHHHHHHHH
Q 048567           14 MWYSIILCFPPVL   26 (352)
Q Consensus        14 ~~~~~~~~~~~~~   26 (352)
                      +|++|++++++++
T Consensus         4 l~~iii~~i~l~~   16 (130)
T PF12273_consen    4 LFAIIIVAILLFL   16 (130)
T ss_pred             eHHHHHHHHHHHH
Confidence            3444443333333


No 47 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=34.84  E-value=89  Score=23.53  Aligned_cols=11  Identities=45%  Similarity=0.513  Sum_probs=8.0

Q ss_pred             CCCcccccccC
Q 048567           49 PWPLIGNLNLI   59 (352)
Q Consensus        49 ~~pi~G~l~~~   59 (352)
                      .-|+-||+...
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            36888888665


No 48 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=34.69  E-value=1e+02  Score=19.45  Aligned_cols=40  Identities=20%  Similarity=0.311  Sum_probs=26.4

Q ss_pred             HHHHHHHHHhcccccchHHHHHHHHHHHhhChHHHHHhhh
Q 048567          312 HIKAAIQDLLLGGIETSAITTEWAMSELLKNPRVIQKATE  351 (352)
Q Consensus       312 ~i~~~~~~l~~aG~dTta~tl~~~l~~L~~~Pevq~kl~~  351 (352)
                      ++..++..++-.|-|-.+-.+...+...--||+....+-+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~   45 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIK   45 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence            4556666666677777666777777777777776665543


No 49 
>smart00362 RRM_2 RNA recognition motif.
Probab=31.31  E-value=1.4e+02  Score=18.92  Aligned_cols=39  Identities=31%  Similarity=0.329  Sum_probs=27.3

Q ss_pred             cHHHHHHHhhcCCeeEEeecC-------eeEEEeCCHHHHHHHHhh
Q 048567           64 HVSLHSLSQKYGPIIQLKFGL-------ETVVVASSAEVAELILKT  102 (352)
Q Consensus        64 ~~~~~~~~~kYG~i~~i~~g~-------~~~vvv~~~~~i~eil~~  102 (352)
                      ...+.++.++||++..+++-.       .-++-..+++.++.++..
T Consensus        13 ~~~l~~~~~~~g~v~~~~~~~~~~~~~~~~~v~f~~~~~a~~a~~~   58 (72)
T smart00362       13 EEDLKELFSKFGPIESVKIPKDTGKSKGFAFVEFESEEDAEKAIEA   58 (72)
T ss_pred             HHHHHHHHHhcCCEEEEEEecCCCCCCceEEEEeCCHHHHHHHHHH
Confidence            355678888999987766432       224557788888888754


No 50 
>TIGR03063 srtB_target sortase B cell surface sorting signal. Two different classes of sorting signal, both analogous to the sortase A signal LPXTG, may be recognized by the sortase SrtB. These are given as NXZTN and NPKXZ. Proteins sorted by this class of sortase are less common than the sortase A and LPXTG system. This model describes a number of cell surface protein C-terminal regions from Gram-positive bacteria that appear to be sortase B (SrtB) sorting signals.
Probab=30.36  E-value=1e+02  Score=17.13  Aligned_cols=18  Identities=17%  Similarity=0.204  Sum_probs=9.2

Q ss_pred             cCCCCchH-HHHHHHHHHH
Q 048567            6 TASPSDSV-MWYSIILCFP   23 (352)
Q Consensus         6 ~~~~~~~~-~~~~~~~~~~   23 (352)
                      ||.-+|.- |++++++++.
T Consensus         1 NPkT~D~a~i~ly~~l~~~   19 (29)
T TIGR03063         1 NPKTGDSAQIGLYAVLFLG   19 (29)
T ss_pred             CCCCccchhHHHHHHHHHH
Confidence            45556665 4545444433


No 51 
>PF03464 eRF1_2:  eRF1 domain 2;  InterPro: IPR005141  This domain is found in the release factor eRF1 which terminates protein biosynthesis by recognizing stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known []. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site []. This domain is also found in other proteins which may also be involved in translation termination ; PDB: 3AGK_A 2VGN_A 2VGM_A 3J16_A 3IZQ 3IR9_A 3OBW_A 3MCA_B 2QI2_A 3E1Y_D ....
Probab=28.85  E-value=53  Score=25.64  Aligned_cols=30  Identities=20%  Similarity=0.200  Sum_probs=24.9

Q ss_pred             cccccchHHHHHHHHHHHhhChHHHHHhhh
Q 048567          322 LGGIETSAITTEWAMSELLKNPRVIQKATE  351 (352)
Q Consensus       322 ~aG~dTta~tl~~~l~~L~~~Pevq~kl~~  351 (352)
                      ....+.|+++-...+.++.++|.+++++.+
T Consensus       104 ~i~~~~~s~~~~~gl~Evl~~~~v~~~l~d  133 (133)
T PF03464_consen  104 KIVVVDTSSGGESGLNEVLKRPEVQKILKD  133 (133)
T ss_dssp             EEEEEE-SSSCHHHHHHHHHSHHHHHHHCT
T ss_pred             EEEEEECCCCCHHHHHHHHHhhhHHHHhcC
Confidence            355888888999999999999999998754


No 52 
>PF15106 TMEM156:  TMEM156 protein family
Probab=28.22  E-value=79  Score=26.80  Aligned_cols=30  Identities=23%  Similarity=0.593  Sum_probs=16.2

Q ss_pred             ccccCCCCchHHHHHHH-HHHHHHHHHHHhh
Q 048567            3 DTATASPSDSVMWYSII-LCFPPVLLLLFHR   32 (352)
Q Consensus         3 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   32 (352)
                      |+.++-.++--.||+++ +++++++++++++
T Consensus       166 dvkn~~CsmKITWYvLVllVfiflii~iI~K  196 (226)
T PF15106_consen  166 DVKNSTCSMKITWYVLVLLVFIFLIILIIYK  196 (226)
T ss_pred             cccCceeehhhHHHHHHHHHHHHHHHHHHHH
Confidence            34555555556787655 4444555554443


No 53 
>PF14259 RRM_6:  RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); PDB: 2DNN_A 1WI6_A 2EVZ_A 2ADC_A 1QM9_A 2KG1_A 2HGN_A 1U2F_A 2G4B_A 2HZC_A ....
Probab=28.14  E-value=94  Score=20.52  Aligned_cols=41  Identities=22%  Similarity=0.314  Sum_probs=29.5

Q ss_pred             cHHHHHHHhhcCCeeEEeecCe--------eEEEeCCHHHHHHHHhhCC
Q 048567           64 HVSLHSLSQKYGPIIQLKFGLE--------TVVVASSAEVAELILKTHD  104 (352)
Q Consensus        64 ~~~~~~~~~kYG~i~~i~~g~~--------~~vvv~~~~~i~eil~~~~  104 (352)
                      ...+.++..+||+|-.+++...        =+|-..+++.++.++....
T Consensus        12 ~~~l~~~f~~~g~v~~v~~~~~~~~~~~~~a~v~f~~~~~a~~al~~~~   60 (70)
T PF14259_consen   12 EEDLRNFFSRFGPVEKVRLIKNKDGQSRGFAFVEFSSEEDAKRALELLN   60 (70)
T ss_dssp             HHHHHHHCTTSSBEEEEEEEESTTSSEEEEEEEEESSHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCcceEEEEeeeccccCCEEEEEeCCHHHHHHHHHHCC
Confidence            3557788889999877775322        2455889999999987643


No 54 
>PF15206 FAM209:  FAM209 family
Probab=28.05  E-value=39  Score=26.51  Aligned_cols=12  Identities=25%  Similarity=0.567  Sum_probs=8.1

Q ss_pred             CCCCCCCCCccc
Q 048567           43 PPPGPKPWPLIG   54 (352)
Q Consensus        43 ~~PGp~~~pi~G   54 (352)
                      .|||..+.|+-.
T Consensus        67 ~p~glrg~~frs   78 (150)
T PF15206_consen   67 SPPGLRGCSFRS   78 (150)
T ss_pred             CCCccCcccCCC
Confidence            678877766543


No 55 
>PF14316 DUF4381:  Domain of unknown function (DUF4381)
Probab=24.45  E-value=1.2e+02  Score=24.12  Aligned_cols=28  Identities=25%  Similarity=0.434  Sum_probs=12.5

Q ss_pred             ccccCCCCch-----HHHHHHHHHHHHHHHHHH
Q 048567            3 DTATASPSDS-----VMWYSIILCFPPVLLLLF   30 (352)
Q Consensus         3 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~   30 (352)
                      |+..|+|..-     --|+++++++++++.+++
T Consensus         7 DI~~P~~vswwP~a~GWwll~~lll~~~~~~~~   39 (146)
T PF14316_consen    7 DIHLPPPVSWWPLAPGWWLLLALLLLLLILLLW   39 (146)
T ss_pred             CCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence            4555555442     344444444444444433


No 56 
>cd01646 RT_Bac_retron_I RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.
Probab=23.62  E-value=88  Score=25.05  Aligned_cols=57  Identities=21%  Similarity=0.230  Sum_probs=35.5

Q ss_pred             CcCCCCCCCCCCCCCcccccccCCCCCcHHHHHHHhh-cCCeeEEeecCeeEEEeCCHHHHHHHHh
Q 048567           37 NKLNLLPPPGPKPWPLIGNLNLIGQLPHVSLHSLSQK-YGPIIQLKFGLETVVVASSAEVAELILK  101 (352)
Q Consensus        37 ~~~~~~~~PGp~~~pi~G~l~~~~~~~~~~~~~~~~k-YG~i~~i~~g~~~~vvv~~~~~i~eil~  101 (352)
                      ....  .|.|+...|+++|+...      .+.++..+ .+.+.-++.-..-+++..+.+.+++++.
T Consensus        50 ~~~G--lpqG~~lS~~L~~~~l~------~~d~~i~~~~~~~~~~RY~DD~~i~~~~~~~~~~~~~  107 (158)
T cd01646          50 QTNG--LPIGPLTSRFLANIYLN------DVDHELKSKLKGVDYVRYVDDIRIFADSKEEAEEILE  107 (158)
T ss_pred             CCce--EccCcchHHHHHHHHHH------HHHHHHHhccCCceEEEecCcEEEEcCCHHHHHHHHH
Confidence            4456  77799999999997642      24444444 5555555656555556677776655543


No 57 
>PF07912 ERp29_N:  ERp29, N-terminal domain;  InterPro: IPR012883 ERp29 (P52555 from SWISSPROT) is a ubiquitously expressed endoplasmic reticulum protein, and is involved in the processes of protein maturation and protein secretion in this organelle [, ]. The protein exists as a homodimer, with each monomer being composed of two domains. The N-terminal domain featured in this family is organised into a thioredoxin-like fold that resembles the a domain of human protein disulphide isomerase (PDI) []. However, this domain lacks the C-X-X-C motif required for the redox function of PDI; it is therefore thought that the function of ERp29 is similar to the chaperone function of PDI []. The N-terminal domain is exclusively responsible for the homodimerisation of the protein, without covalent linkages or additional contacts with other domains []. ; GO: 0009306 protein secretion, 0005788 endoplasmic reticulum lumen; PDB: 2QC7_B 1G7E_A 2C0G_B 1OVN_A 2C0F_A 2C0E_A 2C1Y_B.
Probab=22.67  E-value=3.4e+02  Score=21.10  Aligned_cols=43  Identities=23%  Similarity=0.308  Sum_probs=25.8

Q ss_pred             HHHHhhcC------CeeEEeecC-eeEEEe-----CCHHHHHHHHhhCCcccCCC
Q 048567           68 HSLSQKYG------PIIQLKFGL-ETVVVA-----SSAEVAELILKTHDLTFASR  110 (352)
Q Consensus        68 ~~~~~kYG------~i~~i~~g~-~~~vvv-----~~~~~i~eil~~~~~~f~~r  110 (352)
                      .++++|||      |++.+..|+ .+-|-.     -..+.++..+..++..|.++
T Consensus        71 ~~Laery~i~ke~fPv~~LF~~~~~~pv~~p~~~~~t~~~l~~fvk~~t~~yigl  125 (126)
T PF07912_consen   71 MELAERYKIDKEDFPVIYLFVGDKEEPVRYPFDGDVTADNLQRFVKSNTGLYIGL  125 (126)
T ss_dssp             HHHHHHTT-SCCC-SEEEEEESSTTSEEEE-TCS-S-HHHHHHHHHHTSS--TTS
T ss_pred             HHHHHHhCCCcccCCEEEEecCCCCCCccCCccCCccHHHHHHHHHhCCCeeecC
Confidence            68899997      788777644 333433     24567777777765555544


No 58 
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=21.10  E-value=1.2e+02  Score=20.57  Aligned_cols=23  Identities=9%  Similarity=0.156  Sum_probs=18.3

Q ss_pred             HHHHHHHHHHHhhChHHHHHhhh
Q 048567          329 AITTEWAMSELLKNPRVIQKATE  351 (352)
Q Consensus       329 a~tl~~~l~~L~~~Pevq~kl~~  351 (352)
                      .+..+-++-.++++||.+.+++.
T Consensus        20 G~v~~~a~e~iaRqPE~~~~i~~   42 (66)
T PRK13467         20 GFLMANLFKSAARQPEMIGQLRS   42 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHH
Confidence            45566677789999999999873


No 59 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=20.45  E-value=1.1e+02  Score=18.66  Aligned_cols=17  Identities=18%  Similarity=0.356  Sum_probs=13.4

Q ss_pred             HHHHHHHhhChHHHHHh
Q 048567          333 EWAMSELLKNPRVIQKA  349 (352)
Q Consensus       333 ~~~l~~L~~~Pevq~kl  349 (352)
                      .|-++-+.++||||+=+
T Consensus        13 l~gl~~~l~DpdvqrgL   29 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGL   29 (42)
T ss_pred             HHHHHHHHcCHHHHHHH
Confidence            56778889999999754


No 60 
>PHA02657 hypothetical protein; Provisional
Probab=20.08  E-value=1.7e+02  Score=20.82  Aligned_cols=16  Identities=13%  Similarity=0.459  Sum_probs=6.8

Q ss_pred             HHHHHHHHHHHHHHHH
Q 048567           13 VMWYSIILCFPPVLLL   28 (352)
Q Consensus        13 ~~~~~~~~~~~~~~~~   28 (352)
                      +|.+++.++.++.+.|
T Consensus        27 imVitvfv~vI~il~f   42 (95)
T PHA02657         27 ILVFTIFIFVVCILIY   42 (95)
T ss_pred             hhHHHHHHHHHHHHHH
Confidence            3555444443333333


Done!