BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>048574
MGTIKINRITSPFASADSEPSAYDVLQEYDFPVGILPKGVTRYALNAETGELIFGTYEQQ
LQLHH

High Scoring Gene Products

Symbol, full name Information P value
AT1G02816 protein from Arabidopsis thaliana 2.3e-07
AT4G02370 protein from Arabidopsis thaliana 6.1e-07
AT4G02360 protein from Arabidopsis thaliana 2.1e-06
AT5G16380 protein from Arabidopsis thaliana 3.3e-05
AT1G02813 protein from Arabidopsis thaliana 0.00013

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  048574
        (65 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006096 - symbol:AT1G02816 "AT1G02816" speci...   118  2.3e-07   1
TAIR|locus:2133264 - symbol:AT4G02370 "AT4G02370" species...   114  6.1e-07   1
TAIR|locus:2133254 - symbol:AT4G02360 "AT4G02360" species...   109  2.1e-06   1
TAIR|locus:2171297 - symbol:AT5G16380 "AT5G16380" species...   100  3.3e-05   1
TAIR|locus:505006095 - symbol:AT1G02813 species:3702 "Ara...    92  0.00013   1


>TAIR|locus:505006096 [details] [associations]
            symbol:AT1G02816 "AT1G02816" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005773 "vacuole"
            evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
            EMBL:CP002684 GO:GO:0005774 EMBL:AC009525 Gene3D:2.30.240.10
            InterPro:IPR007493 Pfam:PF04398 SUPFAM:SSF141562
            ProtClustDB:CLSN2687629 EMBL:AF386977 EMBL:AY072513 EMBL:AY086837
            EMBL:DQ446222 IPI:IPI00520001 PIR:C86158 RefSeq:NP_563664.1
            UniGene:At.11715 ProteinModelPortal:Q9SRX5 PRIDE:Q9SRX5
            EnsemblPlants:AT1G02816.1 GeneID:839308 KEGG:ath:AT1G02816
            KEGG:dosa:Os05t0362300-01 KEGG:dosa:Os05t0362500-01 TAIR:At1g02816
            InParanoid:Q9SRX5 OMA:ENFLECP PhylomeDB:Q9SRX5
            Genevestigator:Q9SRX5 Uniprot:Q9SRX5
        Length = 166

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 25/46 (54%), Positives = 31/46 (67%)

Query:     9 ITSPFASA---DSEPSAYDVLQEYDFPVGILPKGVTRYALNAETGE 51
             I SP  +A   D  P+AY +LQ Y+FPVGILPKGV  Y L+  TG+
Sbjct:    16 IPSPLIAAANDDDIPTAYTLLQSYNFPVGILPKGVVSYDLDKSTGQ 61


>TAIR|locus:2133264 [details] [associations]
            symbol:AT4G02370 "AT4G02370" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0005773 "vacuole" evidence=IDA]
            [GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0048767 "root
            hair elongation" evidence=RCA] GO:GO:0005774 EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL161494 EMBL:AF069298
            Gene3D:2.30.240.10 InterPro:IPR007493 Pfam:PF04398 SUPFAM:SSF141562
            EMBL:AF360333 EMBL:AY056340 IPI:IPI00541862 PIR:T01313
            RefSeq:NP_567230.1 UniGene:At.22062 UniGene:At.74049
            ProteinModelPortal:O81296 PaxDb:O81296 PRIDE:O81296
            EnsemblPlants:AT4G02370.1 GeneID:828057 KEGG:ath:AT4G02370
            TAIR:At4g02370 eggNOG:NOG308814 HOGENOM:HOG000238027
            InParanoid:O81296 OMA:NGDEMEF PhylomeDB:O81296
            ProtClustDB:CLSN2687629 Genevestigator:O81296 Uniprot:O81296
        Length = 167

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 22/38 (57%), Positives = 30/38 (78%)

Query:    15 SADSE-PSAYDVLQEYDFPVGILPKGVTRYALNAETGE 51
             +A+S+ P+AY +LQ Y+FPVGILPKGV  Y L+  TG+
Sbjct:    24 AAESDTPTAYSLLQSYNFPVGILPKGVVAYDLDTTTGK 61


>TAIR|locus:2133254 [details] [associations]
            symbol:AT4G02360 "AT4G02360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL161494 EMBL:AF069298
            Gene3D:2.30.240.10 InterPro:IPR007493 Pfam:PF04398 SUPFAM:SSF141562
            HOGENOM:HOG000238027 IPI:IPI00546789 PIR:T01314 RefSeq:NP_192145.1
            UniGene:At.43858 ProteinModelPortal:O81297 SMR:O81297 PaxDb:O81297
            PRIDE:O81297 EnsemblPlants:AT4G02360.1 GeneID:827767
            KEGG:ath:AT4G02360 TAIR:At4g02360 eggNOG:NOG266396 OMA:CEFTIQS
            PhylomeDB:O81297 ProtClustDB:CLSN2916011 ArrayExpress:O81297
            Genevestigator:O81297 Uniprot:O81297
        Length = 154

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 21/41 (51%), Positives = 28/41 (68%)

Query:    10 TSPFASADSEPSAYDVLQEYDFPVGILPKGVTRYALNAETG 50
             T  FA +  +P+AYD ++ Y+ P GILPKGV  Y LN +TG
Sbjct:    17 TVSFAVSGQKPTAYDAVKLYNLPPGILPKGVVDYELNPKTG 57


>TAIR|locus:2171297 [details] [associations]
            symbol:AT5G16380 "AT5G16380" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 Gene3D:2.30.240.10 InterPro:IPR007493
            Pfam:PF04398 SUPFAM:SSF141562 EMBL:AY063989 EMBL:AY117177
            IPI:IPI00522729 RefSeq:NP_568330.1 UniGene:At.27116
            ProteinModelPortal:Q8VZN3 SMR:Q8VZN3 STRING:Q8VZN3
            EnsemblPlants:AT5G16380.1 GeneID:831499 KEGG:ath:AT5G16380
            TAIR:At5g16380 InParanoid:Q8VZN3 OMA:DAKFENQ PhylomeDB:Q8VZN3
            ProtClustDB:CLSN2917649 ArrayExpress:Q8VZN3 Genevestigator:Q8VZN3
            Uniprot:Q8VZN3
        Length = 195

 Score = 100 (40.3 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 19/47 (40%), Positives = 31/47 (65%)

Query:     4 IKINRITSPFASADSEPSAYDVLQEYDFPVGILPKGVTRYALNAETG 50
             +  + I  P  S+  +PS YD L+E + P GI+PKGVT ++++ +TG
Sbjct:    13 VLFSSILFPQLSSLPDPSFYDYLRESNLPAGIVPKGVTNFSIDIKTG 59


>TAIR|locus:505006095 [details] [associations]
            symbol:AT1G02813 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0010584 "pollen exine
            formation" evidence=RCA] EMBL:CP002684 Gene3D:2.30.240.10
            InterPro:IPR007493 Pfam:PF04398 SUPFAM:SSF141562 IPI:IPI00523949
            RefSeq:NP_563663.1 UniGene:At.42578 ProteinModelPortal:F4HXM8
            SMR:F4HXM8 PRIDE:F4HXM8 EnsemblPlants:AT1G02813.1 GeneID:839360
            KEGG:ath:AT1G02813 OMA:CEFRVGD Uniprot:F4HXM8
        Length = 149

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 20/41 (48%), Positives = 23/41 (56%)

Query:    10 TSPFASADSEPSAYDVLQEYDFPVGILPKGVTRYALNAETG 50
             TS   S   + S Y VL+ Y  P GILP+GV  Y LN  TG
Sbjct:    13 TSVSVSGQKKRSVYQVLENYTLPRGILPEGVHDYDLNRRTG 53


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.136   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       65        65   0.00091  102 3  11 22  0.45    28
                                                     29  0.46    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  445 (47 KB)
  Total size of DFA:  76 KB (2063 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.70u 0.13s 7.83t   Elapsed:  00:00:01
  Total cpu time:  7.70u 0.13s 7.83t   Elapsed:  00:00:01
  Start:  Sat May 11 08:06:08 2013   End:  Sat May 11 08:06:09 2013

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