BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048578
(519 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/543 (38%), Positives = 330/543 (60%), Gaps = 52/543 (9%)
Query: 6 VPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISD 65
P SQL+ +N+A + L LLQ+C+++ + +Q+H Q++K I
Sbjct: 7 TPTSQLSSESNAAQT-------------LHLLQRCSNMEELRQIHGQMLKTGLILDEIPA 53
Query: 66 TQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN 125
++L S NS +AYA VF++I P+TF +NT+IRGY+ + + LY M+ +
Sbjct: 54 SKLLAFCAS-PNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYH 112
Query: 126 GLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
+ +++T+P LLKAC L + + +H+ ++K F S I++ L+ Y GD+KS
Sbjct: 113 SVPHNAYTFPFLLKACSSMSALEETQQIHAHIIK-MGFGSEIYTTNSLLNVYSKSGDIKS 171
Query: 183 AQLLFDQ-------------------------------MTEKNVVTWTAMINGHVKQKNY 211
A+LLFDQ M E+N+++WT+MI+G V
Sbjct: 172 ARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKP 231
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
+E ++LF +M+ +G++++ + LVS L ACA+LG + GKW+H ++ K+ I ++ LG L
Sbjct: 232 KEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVL 291
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
DMYAKCG +EEA+ VF+ + EK V W ++I G AIHG G EA++ F +MQ +G++P+
Sbjct: 292 IDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQ 351
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
+T +LTACSHAGL+ + K +F +M R + +P+++HYGC+VDLL RA LL EA E+I
Sbjct: 352 MTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIE 411
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
NMP++PNA +WG+LL AC N+EL + + LI+++P + G Y+ +++I+AA +
Sbjct: 412 NMPVKPNAAIWGALLNAC---HIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGE 468
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
W+ A ++RR MKE+ + K PGCSVI +N HEF+ GD HP +EI MLE + LRE
Sbjct: 469 WNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLRE 528
Query: 512 ECY 514
E Y
Sbjct: 529 EGY 531
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/543 (38%), Positives = 330/543 (60%), Gaps = 52/543 (9%)
Query: 6 VPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISD 65
P SQL+ +N+A + L LLQ+C+++ + +Q+H Q++K I
Sbjct: 7 TPTSQLSSESNAAQT-------------LHLLQRCSNMEELRQIHGQMLKTGLILDEIPA 53
Query: 66 TQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN 125
++L S NS +AYA VF++I P+TF +NT+IRGY+ + + LY M+ +
Sbjct: 54 SKLLAFCAS-PNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYH 112
Query: 126 GLDPDSFTYPILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
+ +++T+P LLKAC + + + +H+ ++K F S I++ L+ Y GD+KS
Sbjct: 113 SVPHNAYTFPFLLKACSSMSASEETQQIHAHIIK-MGFGSEIYTTNSLLNVYSKSGDIKS 171
Query: 183 AQLLFDQ-------------------------------MTEKNVVTWTAMINGHVKQKNY 211
A+LLFDQ M E+N+++WT+MI+G V
Sbjct: 172 ARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKP 231
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
+E ++LF +M+ +G++++ + LVS L ACA+LG + GKW+H ++ K+ I ++ LG L
Sbjct: 232 KEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVL 291
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
DMYAKCG +EEA+ VF+ + EK V W ++I G AIHG G EA++ F +MQ +G++P+
Sbjct: 292 IDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQ 351
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
+T +LTACSHAGL+ + K +F +M R + +P+++HYGC+VDLL RA LL EA E+I
Sbjct: 352 MTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIE 411
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
NMP++PNA +WG+LL AC N+EL + + LI+++P + G Y+ +++I+AA +
Sbjct: 412 NMPVKPNAAIWGALLNAC---HIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGE 468
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
W+ A ++RR MKE+ + K PGCSVI +N HEF+ GD HP +EI MLE + LRE
Sbjct: 469 WNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLRE 528
Query: 512 ECY 514
E Y
Sbjct: 529 EGY 531
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/512 (39%), Positives = 318/512 (62%), Gaps = 38/512 (7%)
Query: 6 VPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISD 65
P SQL+ +N+A + L LLQ+C+++ + +Q+H Q++K I
Sbjct: 7 TPTSQLSSESNAAQT-------------LHLLQRCSNMEELRQIHGQMLKTGLILDEIPA 53
Query: 66 TQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN 125
++L S NS +AYA VF++I P+TF +NT+IRGY+ + + LY M+ +
Sbjct: 54 SKLLAFCAS-PNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYH 112
Query: 126 GLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
+ +++T+P LLKAC L + + +H+ ++K F S I++ L+ Y GD+KS
Sbjct: 113 SVPHNAYTFPFLLKACSSMSALEETQQIHAHIIK-MGFGSEIYTTNSLLNVYSKSGDIKS 171
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A+LLFDQ+ +++ E ++LF +M+ +G++++ + LVS L ACA+
Sbjct: 172 ARLLFDQVDQRDT-----------------EALNLFHRMQTAGIKLDNVALVSTLQACAD 214
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
LG + GKW+H ++ K+ I ++ LG L DMYAKCG +EEA+ VF+ + EK V W ++
Sbjct: 215 LGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAM 274
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
I G AIHG G EA++ F +MQ +G++P+ +T +LTACSHAGL+ + K +F +M R +
Sbjct: 275 ISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHG 334
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
+P+++HYGC+VDLL RA LL EA E+I NMP++PNA +WG+LL AC N+EL +
Sbjct: 335 FKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNAC---HIHGNLELGK 391
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
+ LI+++P + G Y+ +++I+AA +W+ A ++RR MKE+ + K PGCSVI +N
Sbjct: 392 QIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTA 451
Query: 483 HEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
HEF+ GD HP +EI MLE + LREE Y
Sbjct: 452 HEFLAGDESHPQIKEIDHMLEQIVERLREEGY 483
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/516 (39%), Positives = 305/516 (59%), Gaps = 38/516 (7%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
LQ+C+ + KQ+HA+++K + + T+ S +S + YA +VF+ P T
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSL 153
F +N +IRG++ + R + LY +M+ + +++T+P LLKAC +L + +H+
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 154 VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD------------------------- 188
+ K + + ++++ LI Y G+ K A LLFD
Sbjct: 141 ITKL-GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199
Query: 189 ------QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
+M EKN ++WT MI+G+V+ +E + LF +M++S VE + ++L + LSACA
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQ 259
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
LGA E GKW+H ++NK I ++ LG L DMYAKCG +EEAL VFK + +K+V W ++
Sbjct: 260 LGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTAL 319
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
I G A HG G EA+ F +MQ GIKP+ +T AVLTACS+ GL+E+GK IFY+M RDY
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYN 379
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
++P ++HYGC+VDLL RA LLDEA I+ MP++PNAV+WG+LL AC N+EL E
Sbjct: 380 LKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH---KNIELGE 436
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
E LI ++P++ G YV +NI+A +WD A + RRLMKE+ + K PGCS I +
Sbjct: 437 EIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTT 496
Query: 483 HEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
HEF+ GD HP E+I S + L E Y +
Sbjct: 497 HEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPEL 532
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/473 (43%), Positives = 292/473 (61%), Gaps = 36/473 (7%)
Query: 74 SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFT 133
+L +S + YA LVFNQI NP+TF N++IRGY L + I Y M+ GLDPD FT
Sbjct: 21 ALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFT 80
Query: 134 YPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
+P L K+CG L + K +H K F S + L+ Y N G + SA+ +FD+M K
Sbjct: 81 FPSLFKSCGVLCEGKQLHCHSTK-LGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNK 139
Query: 194 NVVTWTA--------------------------------MINGHVKQKNYREGIDLFRKM 221
+VV+W MINGHV+ +Y E + LF +M
Sbjct: 140 SVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEM 199
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
+ SGV+ +++T+ S+L AC +LGA ELGKW+H ++ K I ++ LG AL DMYAKCG I
Sbjct: 200 QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSI 259
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
E A+RVF+ + EK+V TW ++I GLA+ G G +A+++F +MQMS +KPD +T + VL AC
Sbjct: 260 ESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAAC 319
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SHAGL+ +G F +M Y ++P+++HYGC+VD+L RA + EA ++I+NMPM P+ +
Sbjct: 320 SHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFV 379
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
LL+AC N+ +AE A ++LI+L+P N G YVL+SNIY++ W+ A KMR L
Sbjct: 380 LVGLLSACRIH---GNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMREL 436
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
M ERNI K PGCS IE+ VVHEF+ GD HP S EIY L+ + L+ Y
Sbjct: 437 MVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGY 489
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 126/286 (44%), Gaps = 42/286 (14%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASF-DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINP 94
L + C L + KQ+H K F + I +T L+ N + A VF++++N
Sbjct: 84 LFKSCGVLCEGKQLHCHSTKLGFASDAYIQNT----LMNMYSNCGCLVSARKVFDKMVNK 139
Query: 95 STFAFNTVIRGYAEAGLGHRGIQ--------------------------------LYTQM 122
S ++ T+I YA+ L H I+ L+ +M
Sbjct: 140 SVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEM 199
Query: 123 IGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
+G+ D T LL AC G L K +H + K K V T L+ Y G
Sbjct: 200 QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALG-TALVDMYAKCGS 258
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
++SA +F +M EK+V+TWTA+I G + ++LF +M+ S V+ + +T V VL+A
Sbjct: 259 IESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAA 318
Query: 240 CANLGASELG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
C++ G G + + NK I + + + DM + G I EA
Sbjct: 319 CSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEA 364
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/510 (39%), Positives = 299/510 (58%), Gaps = 38/510 (7%)
Query: 39 KCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFA 98
+C+ + KQ+HA+++K + + T+ S +S + YA +VF+ P TF
Sbjct: 52 RCSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFL 111
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVV 155
+N +IRG++ + R + LY +M+ +++T+P LLKAC +L + +H+ +
Sbjct: 112 WNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQIT 171
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD--------------------------- 188
K + + ++++ LI Y G+ K A LLFD
Sbjct: 172 KL-GYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIAL 230
Query: 189 ----QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
+M EKN ++WT MI+G+V+ ++E + LF +M++S VE + ++L + LSACA LG
Sbjct: 231 TLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLG 290
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
A E GKW+H ++ K I ++ LG L DMYAKCG + EAL VFK + K+V W ++I
Sbjct: 291 ALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALIS 350
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVE 364
G A HG G EA+ F +MQ GIKP+ +T VLTACS+ GL+E+GK IFYNM RDY ++
Sbjct: 351 GYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLK 410
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIA 424
P ++HYGC+VDLL RA LLDEA I+ MP++PNAV+WG+LL AC N+EL E
Sbjct: 411 PTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK---NIELGEEI 467
Query: 425 MERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHE 484
E LI ++P++ G YV +NI+A +WD A + RRLMKE+ + K PGCS I + HE
Sbjct: 468 GEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 527
Query: 485 FMVGDGRHPCSEEIYSMLEYVAISLREECY 514
F+ GD HP E+I S + + L E Y
Sbjct: 528 FLAGDRSHPEIEKIQSKWKIMRRKLEENGY 557
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/515 (37%), Positives = 323/515 (62%), Gaps = 44/515 (8%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+P+L+ C ++V+ K++HA I+K S S + K+++ + ++ YA+L+F ++ +
Sbjct: 18 VPILKNCPNIVELKKIHAHIVKFSLSQ---SSFLVTKMVDVCNHHAETEYANLLFKRVAD 74
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG-----NGLDPDSFTYPILLKACGDL---- 144
P+ F +N +IR Y + I +Y QM+G N + PD FT+P ++K+C L
Sbjct: 75 PNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYD 134
Query: 145 --RQVKG-VHSLVVKSK------------------DFNSVIHSLTR--------LITFYC 175
+QV G V KS D + V +T LI+ +
Sbjct: 135 LGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHV 194
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
G ++ A+ +F++M +K + +WTA+++G+ + Y + ++ FR+M+ G+E +E++LVS
Sbjct: 195 RLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVS 254
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
VL ACA LGA ELGKW+H + +K + N + AL +MYAKCG I+E R+F + E++
Sbjct: 255 VLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERD 314
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
V +W+++I GLA HG EA+++F +MQ + I+P+ +T + +L+AC+HAGL+ +G F
Sbjct: 315 VISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFE 374
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+M+RDY +EP V+HYGCLV+LL + LD+A E+I+ MPM+P++ +WGSLL++C S
Sbjct: 375 SMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSH--- 431
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
+N+E+A IAME L++LEP + GNYVL+SN+YA +WD +MR+LM+ +++ K PGCS
Sbjct: 432 SNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSS 491
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
IE++++V EF GD P S+ IY +L+ + + R
Sbjct: 492 IEVDNMVQEFASGDDSKPFSKAIYRVLKLLVMHQR 526
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/532 (37%), Positives = 312/532 (58%), Gaps = 54/532 (10%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L L + C + KQ+H++ IK I ++ S + YA +F+ I
Sbjct: 18 LSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSR-EFGDMCYARQLFDTIPE 76
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA------------- 140
PS F++N + +GY+ G+ LY +M+ + PD +TYP L K
Sbjct: 77 PSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGREL 136
Query: 141 -------------------------CGDLRQVKGVHSLVVKSK--DFNSVIH-------- 165
CG + +G+ + KS +N++I
Sbjct: 137 HCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKD 196
Query: 166 --SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
S T ++T + N G V +A+ F +M E++ V+WTAMI+G+++ Y+E + LFR+M+
Sbjct: 197 VISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQT 256
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
S ++ +E T+VSVL+ACA LGA ELG+W+ +++KN + + +G AL DMY KCG +E
Sbjct: 257 SKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEM 316
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
AL +F + +++ TW +++ GLAI+GCGEEA+ MF QM + + PD+VT + VL+AC+H
Sbjct: 317 ALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTH 376
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
G++++GK+ F +M + +EPN+ HYGC+VDLL +A L EA+E+I+NMPM+PN+++WG
Sbjct: 377 TGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWG 436
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL AC D E+AE A+E++++LEP N YVL NIYAA +WD ++R++M
Sbjct: 437 ALLGACRIHKDA---EMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMM 493
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
+R I K PGCS+IE+N +VHEF+ GD HP ++EIY L + L+ Y+
Sbjct: 494 DRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYS 545
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/504 (40%), Positives = 321/504 (63%), Gaps = 26/504 (5%)
Query: 34 LPLLQKCTHLVQ---------FKQVHAQIIKASFDNRTISDTQLAK----LIESLVNSSQ 80
LP+++KC +L+Q +Q+HA I+ +ISD +L K + SL +
Sbjct: 12 LPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGV---SISDAELGKHLIFYLVSLPSPPP 68
Query: 81 IAYAHLVFNQIINP-STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL-DPDSFTYPILL 138
++YAH VF++I P + F +NT+IRGYAE G LY +M +GL +PD+ TYP L+
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 139 KAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
KA D+R + +HS+V++S F S+I+ L+ Y N GDV SA +FD+M EK++
Sbjct: 129 KAVTTMADVRLGETIHSVVIRS-GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL 187
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V W ++ING + E + L+ +M G++ + T+VS+LSACA +GA LGK VH +
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
+ K + N L D+YA+CG +EEA +F +++KN +W S+I GLA++G G+EA
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 316 VKMFWQMQMS-GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
+++F M+ + G+ P ++T + +L ACSH G++++G E F MR +YK+EP ++H+GC+V
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
DLL RA + +AYE I++MPM+PN V+W +LL AC D +LAE A ++++LEP
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS---DLAEFARIQILQLEPN 424
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+ G+YVL+SN+YA++ +W D K+R+ M + K PG S++E+ + VHEF++GD HP
Sbjct: 425 HSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQ 484
Query: 495 SEEIYSMLEYVAISLREECYAARM 518
S+ IY+ L+ + LR E Y ++
Sbjct: 485 SDAIYAKLKEMTGRLRSEGYVPQI 508
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/518 (39%), Positives = 309/518 (59%), Gaps = 43/518 (8%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQII 92
L L+ CT L K +HA +I+A TI D A LI +N + + YA VF QI
Sbjct: 19 LSFLESCTTLSHLKIIHAHLIRA----HTIFDVFAASCLISISINKNLLDYAAQVFYQIQ 74
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKG 149
NP+ F +N+ IRG++ + + Y Q NGL PD+ TYP L+KAC G L
Sbjct: 75 NPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQ 134
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL------------------------ 185
H +++ F+S ++ L+T Y GD+KSA
Sbjct: 135 AHGQIIR-HGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSG 193
Query: 186 -------LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
LFD+M EKN+VTW+ MI+G+ K + + I+L+ ++ GV NE +VSV++
Sbjct: 194 DVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIA 253
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
+CA+LGA ELG+ H+++ +N + +N LG AL DMYA+CG I++A+ VF + ++ +
Sbjct: 254 SCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALS 313
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
W ++I G A+HG E+A++ F +M+ +G+ P ++T AVL+ACSH GL+E+G E+F +M+
Sbjct: 314 WTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMK 373
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
RDY++EP ++HYGC+VDLL RA L EA + + MPM+PNA +WG+LL AC N
Sbjct: 374 RDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHK---NS 430
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
E+AE A + LI+L+P + G YVL+SNIYA +W++ +R++MKER +VK PG ++ E+
Sbjct: 431 EIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEM 490
Query: 479 NDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
+ VH+F +GD HP ++I M E + +R Y
Sbjct: 491 DGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTG 528
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/507 (39%), Positives = 308/507 (60%), Gaps = 43/507 (8%)
Query: 36 LLQKCTHLVQFKQVHAQIIK-ASFDNRTISDTQLAKLIE-SLVNSSQIAYAHLVFNQIIN 93
LL++C+++ + Q+H Q++K + N+ T L LVN +AY +VF+ I +
Sbjct: 16 LLERCSNMKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELVN---LAYTRVVFDSISS 72
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGV 150
P+T +NT++R Y+ + + LY QM+ N + +S+T+P LLKAC L + + +
Sbjct: 73 PNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETQQI 132
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ--------------------- 189
H+ ++K + F +++ L+ Y G+++SA +LF+Q
Sbjct: 133 HAHIIK-RGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGN 191
Query: 190 ----------MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
M EKNV++WT MI G V+ ++E + L ++M +G++ + +TL LSA
Sbjct: 192 LDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSA 251
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
CA LGA E GKW+H ++ KN I ++ LG LTDMY KCG +E+AL VF + +K VC W
Sbjct: 252 CAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAW 311
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
+IIGGLAIHG G EA+ F QMQ +GI P+ +T A+LTACSHAGL E+GK +F +M
Sbjct: 312 TAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSS 371
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
Y ++P+++HYGC+VDL+ RA LL EA E I +MP++PNA +WG+LL AC + E
Sbjct: 372 VYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLHK---HFE 428
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
L + + LI+L+P + G Y+ +++IYAA +W+ ++R +K R ++ +PGCS I +N
Sbjct: 429 LGKEIGKILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSSITLN 488
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLEYVA 506
VVHEF GDG HP +EIY M +A
Sbjct: 489 GVVHEFFAGDGSHPHIQEIYGMPNLLA 515
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 136/301 (45%), Gaps = 37/301 (12%)
Query: 127 LDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF-YCNFGDVKSAQL 185
L P++ LL+ C +++++ +H ++K + + T L+++ ++ ++
Sbjct: 6 LPPNTEQTQALLERCSNMKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTRV 65
Query: 186 LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA 245
+FD ++ N V W M+ + + + L+ +M + V N T +L AC+ L A
Sbjct: 66 VFDSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSA 125
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN----- 300
E + +H + K L +L +YA G I+ A +F + +++ +WN
Sbjct: 126 FEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDG 185
Query: 301 --------------------------SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
++I G G +EA+ + QM ++GIKPD +TL
Sbjct: 186 YIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITL 245
Query: 335 IAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGC-LVDLLCRARLLDEAYEVIRN 392
L+AC+ G +E+GK I Y + + K++P + GC L D+ + +++A V
Sbjct: 246 SCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVL---GCVLTDMYVKCGEMEKALLVFSK 302
Query: 393 M 393
+
Sbjct: 303 L 303
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/520 (39%), Positives = 328/520 (63%), Gaps = 23/520 (4%)
Query: 15 TNSANSHKNSNTATKSHHHLP---LLQKCTHLV--------QFKQVHAQIIKASFDNRTI 63
T+S H + +T + P +L+KC L+ +F+Q+HA I+ +
Sbjct: 14 THSPRKHFSFTISTSTCPESPKSYILKKCIALLLSCASSKFKFRQIHAFSIRHGV---PL 70
Query: 64 SDTQLAK-LIESLVN-SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQ 121
++ + K LI +L++ S ++YAH +F+QI NP+ F +NT+IRGYAE+ ++LY Q
Sbjct: 71 TNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQ 130
Query: 122 MIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG 178
M + ++PD+ TYP LLKA D+R+ + VHS+ +++ F S++ L+ Y G
Sbjct: 131 MHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRN-GFESLVFVQNTLVHMYAACG 189
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
+SA LF+ M E+N+VTW ++ING+ E + LFR+M GVE + T+VS+LS
Sbjct: 190 HAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLS 249
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
ACA LGA LG+ H ++ K + N G AL D+YAKCG I +A +VF + EK+V +
Sbjct: 250 ACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVS 309
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
W S+I GLA++G G+EA+++F +++ G+ P ++T + VL ACSH G++++G + F M+
Sbjct: 310 WTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMK 369
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
+Y + P ++HYGC+VDLL RA L+ +A+E I+NMPM+PNAV+W +LL AC ++
Sbjct: 370 EEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIH---GHL 426
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
L E+A +L++LEP + G+YVL+SN+YA++ +W D K+RR M + K PG S++E+
Sbjct: 427 ALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVEL 486
Query: 479 NDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
+ +HEF++GD HP +EEIY L + L+ E Y +
Sbjct: 487 RNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHI 526
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/504 (40%), Positives = 321/504 (63%), Gaps = 26/504 (5%)
Query: 34 LPLLQKCTHLVQ---------FKQVHAQIIKASFDNRTISDTQLAK----LIESLVNSSQ 80
LP+++KC +L+Q +Q+HA I+ +ISD +L K + SL +
Sbjct: 12 LPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGV---SISDAELGKHLIFYLVSLPSPPP 68
Query: 81 IAYAHLVFNQIINP-STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL-DPDSFTYPILL 138
++YAH VF++I P + F +NT+IRGYAE G LY +M +GL +PD+ TYP L+
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 139 KAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
KA D+R + +HS+V++S F S+I+ L+ Y N GDV SA +FD+M EK++
Sbjct: 129 KAVTTMADVRLGETIHSVVIRS-GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL 187
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V W ++ING + E + L+ +M G++ + T+VS+LSACA +GA LGK VH +
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
+ K + N L D+YA+CG +EEA +F +++KN +W S+I GLA++G G+EA
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 316 VKMFWQMQMS-GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
+++F M+ + G+ P ++T + +L ACSH G++++G E F MR +YK+EP ++H+GC+V
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
DLL RA + +AYE I++MPM+PN V+W +LL AC D +LAE A ++++LEP
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS---DLAEFARIQILQLEPN 424
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+ G+YVL+SN+YA++ +W D K+R+ M + K PG S++E+ + VHEF++GD HP
Sbjct: 425 HSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQ 484
Query: 495 SEEIYSMLEYVAISLREECYAARM 518
S+ IY+ L+ + LR E Y ++
Sbjct: 485 SDAIYAKLKEMTGRLRSEGYVPQI 508
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/472 (41%), Positives = 300/472 (63%), Gaps = 12/472 (2%)
Query: 47 KQVHAQIIKASFDNRT-ISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
++VH Q IK + +S+T L+ I A VF+ ++ T+I+G
Sbjct: 145 EEVHGQAIKMGLASDVYVSNT----LMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQG 200
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNS 162
Y + G G+ L+ +M G L D T I+L +C GDLR + +H ++++ + N
Sbjct: 201 YVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNL 260
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ L+ Y GD A+ +F +M KNVV+W +MI+G ++ ++E + +FRKM+
Sbjct: 261 DVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQ 320
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
GV+ +++TLV+VL++CANLG ELGKWVH ++++N I + +G AL DMYAKCG I+
Sbjct: 321 RLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSID 380
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+A VF+ + K+V ++ ++I GLA+HG G +A+ +F +M GI+PD+VT + VLTACS
Sbjct: 381 QACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACS 440
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
H GL+E+G++ F +M Y + P ++HYGC+VDLL RA L++EA E IRNMP+EP+A +
Sbjct: 441 HVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVL 500
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL AC VEL E M+++ K+EP DG YVLMSNIY++ +W DA K+R+ M
Sbjct: 501 GALLGACKIH---GKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTM 557
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR-EEC 513
KERN+ K PGCS IE++ V+HEF GD HP +EIY +L+ + L+ EC
Sbjct: 558 KERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLKNNEC 609
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 216/383 (56%), Gaps = 20/383 (5%)
Query: 19 NSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKA--SFDNRTISDTQLAKL-IESL 75
N HK S +T LQ C + KQ+HA IIK S D + T+L+ L +SL
Sbjct: 19 NPHKLSFLST--------LQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSL 70
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH-RGIQLYTQMIGNGLDPDSFTY 134
+ YA + Q+ P+ +N +IRG A + G+ +Y QM+ G+ PD++T
Sbjct: 71 PIDPR--YALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTI 128
Query: 135 PILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
P +LKAC + R V+ VH +K S ++ L+ Y ++SA+ +FD
Sbjct: 129 PFVLKACAESRAVREGEEVHGQAIK-MGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSP 187
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
++++V+WT MI G+VK REG+ LF +M ++ + +TLV VLS+CA LG LG+
Sbjct: 188 QRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRK 247
Query: 252 VHEFVNKNC-IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
+H ++ +N + L+ +G AL DMY KCG A +VF+ + KNV +WNS+I GLA G
Sbjct: 248 LHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKG 307
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
+E++ MF +MQ G+KPDDVTL+AVL +C++ G++E GK + + R+ ++ +
Sbjct: 308 QFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRN-QIRADGFIG 366
Query: 371 GCLVDLLCRARLLDEAYEVIRNM 393
LVD+ + +D+A V + M
Sbjct: 367 NALVDMYAKCGSIDQACWVFQAM 389
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 140/288 (48%), Gaps = 5/288 (1%)
Query: 127 LDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG---DVKSA 183
+P ++ L+ C ++ +K +H+ ++K+ +++ ++ C D + A
Sbjct: 18 FNPHKLSFLSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYA 77
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYR-EGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
L Q+ N+ + A+I G N EG+ ++++M G+ + T+ VL ACA
Sbjct: 78 LSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAE 137
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
A G+ VH K + + + L MYA C I A +VF ++++ +W ++
Sbjct: 138 SRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTM 197
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
I G G E V +F++M ++ D +TL+ VL++C+ G + G+++ + R+
Sbjct: 198 IQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSN 257
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
V +V LVD+ + + A +V + MP++ N V W S+++ A
Sbjct: 258 VNLDVFVGNALVDMYLKCGDANFARKVFQEMPVK-NVVSWNSMISGLA 304
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/485 (41%), Positives = 302/485 (62%), Gaps = 13/485 (2%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L+ C L+ + ++H ++K FD T L L + AH VF+ I
Sbjct: 118 VLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCL---YAKCGYLEDAHKVFDDIP 174
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKG 149
+ + ++ +I GY G I ++ +++ L PDSFT +L AC GDL +
Sbjct: 175 DKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEW 234
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H +++ +V T L+ Y G+++ A+ +FD M EK++V+W AMI G+
Sbjct: 235 IHKCIMEMGMVRNVFVG-TSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNG 293
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+E IDLF +M+ V+ + T+V VLSACA LGA ELG+WV V++N + N LG
Sbjct: 294 LPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGT 353
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL D+YAKCG + A VFK + EK+ WN+II GLA++G + + +F Q++ GIKP
Sbjct: 354 ALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKP 413
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D T I +L C+HAGL+++G+ F +M R + + P+++HYGC+VDLL RA LLDEA+++
Sbjct: 414 DGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQL 473
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
IRNMPME NA++WG+LL AC D +LAE+A+++LI+LEP+N GNYVL+SNIY+A
Sbjct: 474 IRNMPMEANAIVWGALLGACRIHRD---TQLAELALKQLIELEPWNSGNYVLLSNIYSAN 530
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+WD+A K+R M E+ I K PGCS IE++ +VHEF+VGD HP SE+IY+ L+ + +
Sbjct: 531 LKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKM 590
Query: 510 REECY 514
+ Y
Sbjct: 591 KVAGY 595
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 196/336 (58%), Gaps = 8/336 (2%)
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
S Y +F+QI P+ F +NT+IRG I+ Y M G P++FT+P +L
Sbjct: 60 SDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVL 119
Query: 139 KACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
KAC DL+ +H+LVVK F+ + T L+ Y G ++ A +FD + +KNV
Sbjct: 120 KACARLLDLQLGVKIHTLVVKG-GFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNV 178
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V+WTA+I+G++ +RE ID+FR++ + + + T+V VLSAC LG G+W+H+
Sbjct: 179 VSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKC 238
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
+ + ++ N +G +L DMYAKCG +E+A VF + EK++ +W ++I G A++G +EA
Sbjct: 239 IMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEA 298
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLV 374
+ +F QMQ +KPD T++ VL+AC+ G +E G+ + + R ++ P + L+
Sbjct: 299 IDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGT--ALI 356
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
DL + + A+EV + M E + V+W ++++ A
Sbjct: 357 DLYAKCGSMSRAWEVFKGMK-EKDRVVWNAIISGLA 391
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 119/235 (50%), Gaps = 2/235 (0%)
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
+F D + LF Q+ + N+ W MI G V + + I+ + MR G N T
Sbjct: 58 DFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPF 117
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
VL ACA L +LG +H V K + + +L +YAKCGY+E+A +VF + +KN
Sbjct: 118 VLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKN 177
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
V +W +II G G EA+ MF ++ + PD T++ VL+AC+ G + G+ I +
Sbjct: 178 VVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWI-H 236
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ + NV LVD+ + +++A V MP E + V WG+++ A
Sbjct: 237 KCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP-EKDIVSWGAMIQGYA 290
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/474 (42%), Positives = 302/474 (63%), Gaps = 18/474 (3%)
Query: 40 CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAF 99
CT + + KQ HA +++ + + ++L + +L +S + YA +F Q+ NP F
Sbjct: 21 CTSISKTKQAHALLLRTHLLHNPLFSSKLISFL-ALSHSGDLNYARKLFTQMQNPDPFIC 79
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVK 156
NT+IRGYA + + + LY M+ G+ D++TYP +L AC L VK H V+K
Sbjct: 80 NTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLK 139
Query: 157 SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID 216
+ F S + + LI FY N G A +FD+ T ++VVTW MIN H+ + + D
Sbjct: 140 N-GFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFD 198
Query: 217 LFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK------NCIILNDKLGA 269
L +M + + +E+T+VS++ ACA LG E GK++H + + NC ++ L
Sbjct: 199 LLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLV---LET 255
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG I+ AL+VF+ + +NV TWN++IGGLA+HG GE+A+ +F QM+ + P
Sbjct: 256 ALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMP 315
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
DDVT IA+L ACSHAGL+++G +F M+ +++EP ++HYGC+VDLLCRAR +D+A
Sbjct: 316 DDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAF 375
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I NMP++ N+VLW +LL AC S G + +LAE R+I+LEP + G YV++SN+YA
Sbjct: 376 IENMPIKANSVLWATLLGACRS---GGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGV 432
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
+QWD A K+R+ MK + I K PGCS IE+N ++H+F+ GD H +E+IY+M+E
Sbjct: 433 SQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIE 486
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/504 (39%), Positives = 320/504 (63%), Gaps = 26/504 (5%)
Query: 34 LPLLQKCTHLVQ---------FKQVHAQIIKASFDNRTISDTQLAK----LIESLVNSSQ 80
LP+++KC +L+Q +Q+HA I+ + +ISD +L K + SL +
Sbjct: 12 LPMVEKCINLLQTYGVSSLTKLRQIHAFSIR---NGVSISDAELGKHLIFYLVSLPSPPP 68
Query: 81 IAYAHLVFNQIINP-STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDPDSFTYPILL 138
++YAH VF++I P + F +NT+IRGYAE G + LY +M +G ++PD+ TYP LL
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLL 128
Query: 139 KACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
KA G D+R + +HS+V++S F S+I+ L+ Y N GDV SA +FD+M EK++
Sbjct: 129 KAVGKMADVRLGETIHSVVIRS-GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL 187
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V W ++ING + E + L+ +M G++ + T+VS+LSACA +GA LGK H +
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVY 247
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
+ K + N L D+YA+CG +EEA +F +++KN +W S+I GLA++G G+EA
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEA 307
Query: 316 VKMFWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
+++F M+ G+ P ++T + +L ACSH G++++G E F M +YK+EP ++H+GC+V
Sbjct: 308 IELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMV 367
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
DLL RA + +AYE I MPM+PN V+W +LL AC D +LAE+A ++++LEP
Sbjct: 368 DLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDS---DLAELARMKILQLEPN 424
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+ G+YVL+SN+YA++ +W D K+R+ M + K PG S++E+ + VHEF++GD HP
Sbjct: 425 HSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQ 484
Query: 495 SEEIYSMLEYVAISLREECYAARM 518
++ IY+ L+ + LR E Y ++
Sbjct: 485 NDMIYAKLKEMTDRLRLEGYVPQI 508
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/512 (39%), Positives = 310/512 (60%), Gaps = 37/512 (7%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPS 95
L+ C+ L K +HA +I+ + ++L A ++ +S I YA +F+QI NP+
Sbjct: 24 LETCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPN 83
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHS 152
F FN +IRG++ + + Y Q GL PD+ T+P L+K+C L + H
Sbjct: 84 LFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHG 143
Query: 153 LVVK---SKDF---NSVIH------------------------SLTRLITFYCNFGDVKS 182
++K KD NS++H S T +I + GDV+S
Sbjct: 144 HIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVES 203
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A+ LFDQM EKN+VTW+ MI+G+ + ++ + ++LF+ ++ GV NE +VSV+S+CA+
Sbjct: 204 ARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAH 263
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
LGA ELG+ H++V KN + LN LG AL DMYA+CG I++A+ VF+ + E++ +W ++
Sbjct: 264 LGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTAL 323
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
I GLA+HG E ++K F M +G+ P D+T AVL+ACSH GL+E+G +IF +M+RD++
Sbjct: 324 IAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHR 383
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
VEP ++HYGC+VDLL RA L+EA + MP++PNA +WG+LL AC N E+ E
Sbjct: 384 VEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHK---NAEIGE 440
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
+ LI+L P + G YVL+SNIYA +W+ +MR++MK + + K PG S+IE++ V
Sbjct: 441 RVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRV 500
Query: 483 HEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
H+F +GD HP ++I M E + + +R Y
Sbjct: 501 HKFTIGDSSHPEMDKIERMWEEILMRIRAAGY 532
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/491 (39%), Positives = 302/491 (61%), Gaps = 9/491 (1%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
NSN+ T H L LL KCT L + KQ+ A IK + T+ ++ +
Sbjct: 15 NSNSNTT--HPLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQ 72
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG 142
+AH +F+QI P FNT+ RGYA R L+TQ++ +GL PD +T+P LLKAC
Sbjct: 73 HAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACA 132
Query: 143 D---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
L + + +H L +K + ++ LI Y ++ A+ +FD++ E VVT+
Sbjct: 133 SCKALEEGRQLHCLAIK-LGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYN 191
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
AMI G+ + E + LFR+++ ++ ++T++SVLS+CA LGA +LGKW+HE+V KN
Sbjct: 192 AMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKN 251
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
K+ AL DMYAKCG +++A+ VF+ + ++ W+++I AIHG G +AV +F
Sbjct: 252 GFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLF 311
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
+M+ +G +PD++T + +L ACSH GL+E+G E FY MR Y V P +KHYGC+VDLL R
Sbjct: 312 KEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGR 371
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
A L+EAYE I +P+ P +LW +LL+AC S NVEL + +E++ +L+ + G+Y
Sbjct: 372 AGRLEEAYEFIVGLPIRPTPILWRTLLSACGSH---GNVELGKRVIEQIFELDDSHGGDY 428
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
+++SN+ A +W+D +R+LM ER +VK PGCS +E+N+VVHEF GDG H S +++
Sbjct: 429 IILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLH 488
Query: 500 SMLEYVAISLR 510
L+ + L+
Sbjct: 489 QALDELVKELK 499
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/506 (38%), Positives = 304/506 (60%), Gaps = 37/506 (7%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+ LL++C+++ + KQ+H Q++K ++ ++L S+ S + YA +VF++I +
Sbjct: 15 MSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASM-EFSNLTYARMVFDRISS 73
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSL 153
P+T +NT+IR Y+ + + LY QM+ + + +++T+P LLKAC L + H +
Sbjct: 74 PNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQI 133
Query: 154 VVK--SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD----------------------- 188
V+ + F S +++ L+ Y G +KSA +LFD
Sbjct: 134 HVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNV 193
Query: 189 --------QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
M EKNV++WT+MI G V+ ++E + L ++M +G++ +++TL LSAC
Sbjct: 194 EMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSAC 253
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A LGA E GKW+H ++ KN I ++ LG AL DMY KCG +++AL VF + +K V TW
Sbjct: 254 AGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWT 313
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
+IIGG A+HG G EA+ F QMQ +GIKP T AVLTACSH GL+E+GK +F +M
Sbjct: 314 AIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTF 373
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
Y ++P ++HYGC+VDLL RA L EA E + +MP++PNA +WGSLL AC ++EL
Sbjct: 374 YNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHK---HLEL 430
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
+ + LI+L+P +DG Y+ +++I+AA +WD+A ++R +K + ++ PGCS I +N
Sbjct: 431 GKEIGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNG 490
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVA 506
V HEF G HP E+Y M +A
Sbjct: 491 VAHEFFAGAEPHPHVREMYDMSNLIA 516
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 36/215 (16%)
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY--IEE 283
+++N +S+L C+N+G EL K +H + K I + + L YA + +
Sbjct: 7 LQLNVEQTMSLLERCSNIG--EL-KQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTY 63
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS- 342
A VF + N WN++I + EEA+ ++ QM I + T +L ACS
Sbjct: 64 ARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSA 123
Query: 343 ----------HAGLIEK--GKEIFY--NMRRDYKVEPNVKHYGCLVDLLCRARL------ 382
H +I++ G E++ ++ R Y + ++K L DLL +
Sbjct: 124 LSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTM 183
Query: 383 ---------LDEAYEVIRNMPMEPNAVLWGSLLTA 408
++ AY++ + MP E N + W S++
Sbjct: 184 IDGYIKCGNVEMAYKIFQAMP-EKNVISWTSMIVG 217
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/484 (39%), Positives = 305/484 (63%), Gaps = 11/484 (2%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L+ C+ L +Q+HA I+K F + L I N ++ A VF+++
Sbjct: 130 ILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTL---IHMYANCGEVEVARRVFDEMS 186
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHS 152
+ +N++ GY ++G ++L+ +M+ + D T +L ACG L ++
Sbjct: 187 ERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEW 246
Query: 153 L--VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
+ V+ K +T L+ Y G V +A+ LFDQM ++VV W+AMI+G+ +
Sbjct: 247 INRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASR 306
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
RE +DLF +M+ + ++ NE+T+VS+LS+CA LGA E GKWVH F+ K + L LG A
Sbjct: 307 CREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTA 366
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L D YAKCG +E ++ VF + KNV +W +I GLA +G G++A++ F+ M ++P+
Sbjct: 367 LMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPN 426
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
DVT I VL+ACSHAGL+++G+++F +M RD+ +EP ++HYGC+VD+L RA L++EA++ I
Sbjct: 427 DVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFI 486
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+NMP++PNAV+W +LL +C NVE+ E ++++LI LEP + G+Y+L+SNIYA+
Sbjct: 487 KNMPIQPNAVIWRTLLASCKVH---KNVEIGEESLKQLIILEPTHSGDYILLSNIYASVG 543
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+W+DA K+R MKE+ I K PGCS+IE++ V+HEF D H SEEIY+ +E + ++
Sbjct: 544 RWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIK 603
Query: 511 EECY 514
Y
Sbjct: 604 SAGY 607
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 235/412 (57%), Gaps = 17/412 (4%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK-LIES--LVNSSQIAYAHLVFNQII 92
+L++C + ++HA +IK R + ++A+ L+ES ++ + + YA +F QI
Sbjct: 30 ILEQCKTIRDLNEIHAHLIK----TRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQID 85
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
P + A+N +IRG+ H I L+ +M N + PD FT+P +LK C L+ + +
Sbjct: 86 EPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQ 145
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H+L++K F S LI Y N G+V+ A+ +FD+M+E+NV TW +M G+ K
Sbjct: 146 IHALIMKC-GFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSG 204
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
N+ E + LF +M + + +E+TLVSVL+AC L ELG+W++ +V + + N L
Sbjct: 205 NWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLIT 264
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
+L DMYAKCG ++ A R+F + ++V W+++I G + EA+ +F +MQ + I P
Sbjct: 265 SLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDP 324
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+++T++++L++C+ G +E GK + + +++ +++ V L+D + ++ + EV
Sbjct: 325 NEITMVSILSSCAVLGALETGKWVHFFIKKK-RMKLTVTLGTALMDFYAKCGSVESSIEV 383
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGAN-VELAEIAMERLIKLEPFNDGNYV 440
MP++ N + W L+ AS G +E + +E+ +EP ND ++
Sbjct: 384 FGKMPVK-NVLSWTVLIQGLASNGQGKKALEYFYLMLEK--NVEP-NDVTFI 431
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/527 (39%), Positives = 300/527 (56%), Gaps = 50/527 (9%)
Query: 30 SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
+H + L Q L K VHA +++ D + L K++ N Y+H +F+
Sbjct: 10 AHIKIRLFQGFNSLKHLKHVHAALLRLGLDEDSY---LLNKVLRFSFNFGNTNYSHRIFH 66
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK- 148
Q P+ F FNT+I G I++Y M GL PDSFT+P LLKAC L K
Sbjct: 67 QTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKL 126
Query: 149 --GVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
+H LVVK+ + ++ ++ T L++ Y G + +A +FD + EKNV WTA+I+G+
Sbjct: 127 GIKLHGLVVKAGCESDAFVN--TSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGY 184
Query: 206 VKQKNYREGIDLFR--------------------------------------KMRDSGVE 227
+ RE ID+FR KM + G
Sbjct: 185 IGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFR 244
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+ +V VL ACA LGA ELG W +++N + N LG AL DMYAKCG ++ A V
Sbjct: 245 PDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEV 304
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
F+ + +K++ WN+ I GLA+ G + A +F QM+ SGI+PD T + +L AC+HAGL+
Sbjct: 305 FRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLV 364
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
++G++ F +M R + + P ++HYGC+VDLL RA LDEA++++++MPME NA++WG+LL
Sbjct: 365 DEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLG 424
Query: 408 ACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
C D +L E +++LI LEP N GNYVL+SNIY+A +W+DA K+R +M ER I
Sbjct: 425 GCRLHRD---TQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGI 481
Query: 468 VKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
K PG S IE++ VVHEF+VGD HP SE+IY+ L + L+ Y
Sbjct: 482 KKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGY 528
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/501 (37%), Positives = 305/501 (60%), Gaps = 8/501 (1%)
Query: 6 VPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISD 65
+P Q T T +++ + H L LL KCT L + KQ+ A IK + +
Sbjct: 6 IPTCQFT-LTKPSSAFSKNEFVINQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSDISVL 64
Query: 66 TQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN 125
T+L +S + +AH +F+QI++ FN + RGYA + + L+ +++ +
Sbjct: 65 TKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCS 124
Query: 126 GLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
GL PD +T+ LLKAC LR+ G+H VK N I+ LI Y D+ +
Sbjct: 125 GLLPDDYTFSSLLKACASSKALREGMGLHCFAVK-LGLNHNIYICPTLINMYAECNDMNA 183
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A+ +FD+M + +V++ A+I G+ + E + LFR+++ S +E ++T++SV+ +CA
Sbjct: 184 ARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCAL 243
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
LGA +LGKW+HE+V K K+ AL DM+AKCG + +A+ +F+ + ++ W+++
Sbjct: 244 LGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAM 303
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
I A HG G +A+ MF +M+ G++PD++T + +L ACSHAGL+E+G+ FY+M + Y
Sbjct: 304 IVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYG 363
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
+ P +KHYGC+VDLL RA LDEAY + + ++ +LW +LL+AC++ NVE+A+
Sbjct: 364 ITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTH---GNVEMAK 420
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
+ER+ +L+ + G+YV++SN+YA +W+D +R+LMK+R +VK PGCS +E+N+VV
Sbjct: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
Query: 483 HEFMVGDGRHPCSEEIYSMLE 503
HEF GDG H S E+ L+
Sbjct: 481 HEFFSGDGVHCVSVELRRALD 501
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/491 (40%), Positives = 312/491 (63%), Gaps = 20/491 (4%)
Query: 37 LQKCTHLVQF--------KQVHAQIIKASFDNRTISDTQLAK-LIESLVN-SSQIAYAHL 86
L KC L+QF KQ+HA I+ ++++ + K LI ++V+ S+ ++YA+
Sbjct: 17 LTKCISLLQFCASSKHKLKQIHAFSIRHGV---SLNNPDMGKHLIFTIVSLSAPMSYAYN 73
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---D 143
VF I NP+ F +NT+IRGYAE+ Y QM+ + ++PD+ TYP LLKA +
Sbjct: 74 VFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLN 133
Query: 144 LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
+R+ + +HS+ +++ F S++ L+ Y GD +SA +F+ M E+++V W +MIN
Sbjct: 134 VREGEAIHSVTIRN-GFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMIN 192
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
G E + LFR+M GVE + T+VS+LSA A LGA ELG+ VH ++ K +
Sbjct: 193 GFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSK 252
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
N + +L D+YAKCG I EA RVF + E+N +W S+I GLA++G GEEA+++F +M+
Sbjct: 253 NSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEME 312
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
G+ P ++T + VL ACSH G++++G E F M+ + + P ++HYGC+VDLL RA L+
Sbjct: 313 GQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLV 372
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
+AYE I+NMP++PNAV+W +LL AC ++ L EIA L+ LEP + G+YVL+S
Sbjct: 373 KQAYEYIQNMPVQPNAVIWRTLLGACTIH---GHLGLGEIARSHLLNLEPKHSGDYVLLS 429
Query: 444 NIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
N+YA++ +W D +RR M + + K PG S++E+ + V+EF +GD HP S+++Y++LE
Sbjct: 430 NLYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLE 489
Query: 504 YVAISLREECY 514
+ L+ E Y
Sbjct: 490 KITELLKLEGY 500
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/504 (37%), Positives = 306/504 (60%), Gaps = 46/504 (9%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
L+ C + + K++HA I+K S T++ L ++L S + YA ++F Q+ NP+
Sbjct: 14 LRNCPKIAELKKIHAHIVKLSLSQSNFLVTKMLDLCDNL---SHVDYATMIFQQLENPNV 70
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKACGDL---RQVKGVHS 152
F++N +IR Y I ++ QM+ PD FT+P ++K+C L R + VH+
Sbjct: 71 FSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQVHA 130
Query: 153 LVVKSKDFNSVIHSLTR---------------------------------LITFYCNFGD 179
V K F H++T LI+ + G
Sbjct: 131 HVCK---FGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRLGQ 187
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
+KSA+ +FD+M + +V+WT MING+ + Y + + +FR+M+ G+E +E++++SVL A
Sbjct: 188 MKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVLPA 247
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
CA LGA E+GKW+H++ K+ + N + AL +MYAKCG I+EA +F ++EK+V +W
Sbjct: 248 CAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISW 307
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
+++IGGLA HG G A+++F MQ +G+ P+ VT + VL+AC+HAGL +G F MR
Sbjct: 308 STMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRYFDVMRV 367
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
DY +EP ++HYGCLVDLL R+ +++A + I MPM+P++ W SLL++C N+E
Sbjct: 368 DYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRIHH---NLE 424
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
+A +AME+L+KLEP GNYVL++NIYA +W+ +R+L++ + I K PGCS+IE+N
Sbjct: 425 IAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTPGCSLIEVN 484
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLE 503
++V EF+ GD P S+E++ +L+
Sbjct: 485 NLVQEFVSGDDSKPFSQEVFWILK 508
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/485 (38%), Positives = 312/485 (64%), Gaps = 19/485 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+P+L+ C ++V+ K++HA I+K S S + K+++ + + YA+L+F + +
Sbjct: 63 VPILKDCPNIVELKKIHAHIVKFSLSQ---SSFLVTKMVDVCNHYGETEYANLLFKGVAD 119
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-----LDPDSFTYPILLKACGDLRQV- 147
P+ F +N +IR Y + I +Y QM+GN + PD FT+P ++K+C L
Sbjct: 120 PNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYD 179
Query: 148 --KGVHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN--VVTWTAMI 202
K VH V K + N+V+ + L+ Y + A +F++MTE++ + +WTA++
Sbjct: 180 LGKQVHGHVFKFGQKSNTVVEN--SLVEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIV 237
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
+G+ + Y + ++ FR+M+ G+E +E++LVSVL CA LGA ELGKW+H + +K +
Sbjct: 238 SGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFL 297
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
N + AL +MYAKCG I++ R+F + E++V +W+++I GLA HG EA+++F +M
Sbjct: 298 RNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEM 357
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
Q + I+P +T + +LTAC+HAGL+ +G F +M+RDY +EP V+HYGCLV+LL +
Sbjct: 358 QKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGR 417
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLM 442
LD+A E+++ MP +P++ +WGSLL++C S N+++A IAME L++LEP + GNYVL+
Sbjct: 418 LDQALELVKKMPRKPDSPIWGSLLSSCRSH---GNLKIAVIAMEHLLELEPADTGNYVLL 474
Query: 443 SNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
SN+YA +WD +MR+LM+ +++ K PGCS IE++++V EF GD P S+ I +L
Sbjct: 475 SNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDDSKPFSKAICRVL 534
Query: 503 EYVAI 507
+ + +
Sbjct: 535 KLLVM 539
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/511 (37%), Positives = 316/511 (61%), Gaps = 40/511 (7%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L + CT + +++HAQ+IK TI+ +++ S + I YA+LVF QI NP+
Sbjct: 2 LDKNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFCTS--PAGDINYAYLVFTQIRNPN 59
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG--LDPDSFTYPILLKACGDL---RQVKGV 150
F +NT+IRG++++ H I L+ M+ P TYP + KA L + +
Sbjct: 60 LFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQL 119
Query: 151 HSLVVK-SKDFNSVIHSLTRLITFYCNF-----------------------------GDV 180
H V+K + + I + + C F G++
Sbjct: 120 HGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEI 179
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
++ LFD+M +N V+W +MI+G+V++ + E ++LF +M++ G++ +E T+VS+L+AC
Sbjct: 180 DKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNAC 239
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A LGA G+W+H+++ KN LN + A+ DMY+KCG I++AL+VFK +K + WN
Sbjct: 240 ACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWN 299
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
S+I GLA+ G G EAV++F +++ S +KPD V+ I VLTAC+HAG++++ K+ F M
Sbjct: 300 SLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSET 359
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
YK+EP++KHY C+VD+L RA LL+EA E+I++MP+ P+A++WGSLL++C + N+E+
Sbjct: 360 YKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCR---EYGNIEM 416
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
A+ A +R+ +L+P +++L+SN+YAA +++A + R +KE+ + K PGCS+IE+N
Sbjct: 417 AKQAAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVNG 476
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
VHEF+ G HP S++IY L+ + ++L+E
Sbjct: 477 EVHEFVAGGRLHPRSKDIYHALDDLGLTLKE 507
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/484 (42%), Positives = 301/484 (62%), Gaps = 14/484 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASF-DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINP 94
L + C L + KQ+H K F + I +T L+ N + A VF++++N
Sbjct: 146 LFKSCGVLCEGKQLHCHSTKLGFASDAYIQNT----LMNMYSNCGCLVSARKVFDKMVNK 201
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVH 151
S ++ T+I YA+ L H I+L+ +M + P+ T +L AC DL K VH
Sbjct: 202 SVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVH 261
Query: 152 SLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
+ ++ F++V+ S L+ YC G A+ LF++M EKN+ W MINGHV+ +
Sbjct: 262 KYIDETGIGFHTVLTS--ALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSD 319
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
Y E + LF +M+ SGV+ +++T+ S+L AC +LGA ELGKW+H ++ K I ++ LG A
Sbjct: 320 YEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTA 379
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMYAKCG IE A+RVF+ + EK+V TW ++I GLA+ G G +A+++F +MQMS +KPD
Sbjct: 380 LVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPD 439
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+T + VL ACSHAGL+ +G F +M Y ++P+++HYGC+VD+L RA + EA ++I
Sbjct: 440 AITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLI 499
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+NMPM P+ + LL+AC N+ +AE A ++LI+L+P N G YVL+SNIY++
Sbjct: 500 QNMPMAPDYFVLVGLLSACRIH---GNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMK 556
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
W+ A KMR LM ERNI K PGCS IE+ VVHEF+ GD HP S EIY L+ + L+
Sbjct: 557 NWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLK 616
Query: 511 EECY 514
Y
Sbjct: 617 SAGY 620
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 217/385 (56%), Gaps = 4/385 (1%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
H L L+KCT + Q KQ+HAQ+++ S +++ +L +S + YA LVFNQ
Sbjct: 41 HPCLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFC-ALHDSGSLPYARLVFNQ 99
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGV 150
I NP+TF N++IRGY L + I Y M+ GLDPD FT+P L K+CG L + K +
Sbjct: 100 IPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCEGKQL 159
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H K F S + L+ Y N G + SA+ +FD+M K+VV+W MI + +
Sbjct: 160 HCHSTK-LGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDL 218
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E I LFR+M + V+ NE+TLV+VL+ACA E K VH+++++ I + L +A
Sbjct: 219 PHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSA 278
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L D+Y KCG A +F + EKN+ WN +I G EEA+ +F +MQ+SG+K D
Sbjct: 279 LMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGD 338
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
VT+ ++L AC+H G +E GK + + ++ K+E +V LVD+ + ++ A V
Sbjct: 339 KVTMASLLIACTHLGALELGKWLHVYIEKE-KIEVDVALGTALVDMYAKCGSIESAMRVF 397
Query: 391 RNMPMEPNAVLWGSLLTACASADDG 415
+ MP E + + W +L+ A G
Sbjct: 398 QEMP-EKDVMTWTALIVGLAMCGQG 421
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/507 (38%), Positives = 304/507 (59%), Gaps = 41/507 (8%)
Query: 30 SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
S+H L LL++C++L Q H ++ D I L++ IE+ + Y+H +F
Sbjct: 41 SYHLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNI---LLSRFIEACSSLGFSHYSHSIFT 97
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-- 147
P + +NT+I+ + L I LY +++ + L D+++ P +LKA L +
Sbjct: 98 HKTRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHV 157
Query: 148 -KGVHSLVVKSKDFNSVIHSLTRLITFYCN------------------------------ 176
+ +H + + S IH +T LI Y +
Sbjct: 158 GRQIHCQAIGT-GLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYA 216
Query: 177 -FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
GDV +A+ LF++M E+NV++WTA+I G+ + E I +FR+M+ VE +E+ +++
Sbjct: 217 KVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLA 276
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
LSACA+LGA ELG+W+H +++K+ + L AL DMYAKCG IE+AL VFK + K+
Sbjct: 277 ALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKS 336
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
V TW S+I GLA+HG G EA++MF M+ + IKP+++T +A+L+AC H GL+E G+ F
Sbjct: 337 VITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFK 396
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
M Y ++P ++HYGC++DLL RA L EA E++R MP E NA +WGSLL A+A
Sbjct: 397 CMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLL---AAARIH 453
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
+ EL + A++ LIK+EP N GNY L+SNIYA +++W++AG +R++M++ + K PG S
Sbjct: 454 GDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSC 513
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSML 502
IE+N+ VHEF+ GD HP SE I+ +L
Sbjct: 514 IEVNNRVHEFVAGDKLHPQSERIFEVL 540
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/507 (38%), Positives = 304/507 (59%), Gaps = 41/507 (8%)
Query: 30 SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
S+H L LL++C++L Q H ++ D I L++ IE+ + Y+H +F
Sbjct: 41 SYHLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNI---LLSRFIEACSSLGFSHYSHSIFT 97
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-- 147
P + +NT+I+ + L I LY +++ + L D+++ P +LKA L +
Sbjct: 98 HKTRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHV 157
Query: 148 -KGVHSLVVKSKDFNSVIHSLTRLITFYCN------------------------------ 176
+ +H + + S IH +T LI Y +
Sbjct: 158 GRQIHCQAIGT-GLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYA 216
Query: 177 -FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
GDV +A+ LF++M E+NV++WTA+I G+ + E I +FR+M+ VE +E+ +++
Sbjct: 217 KVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLA 276
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
LSACA+LGA ELG+W+H +++K+ + L AL DMYAKCG IE+AL VFK + K+
Sbjct: 277 ALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKS 336
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
V TW S+I GLA+HG G EA++MF M+ + IKP+++T +A+L+AC H GL+E G+ F
Sbjct: 337 VITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFK 396
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
M Y ++P ++HYGC++DLL RA L EA E++R MP E NA +WGSLL A+A
Sbjct: 397 CMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLL---AAARIH 453
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
+ EL + A++ LIK+EP N GNY L+SNIYA +++W++AG +R++M++ + K PG S
Sbjct: 454 GDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSC 513
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSML 502
IE+N+ VHEF+ GD HP SE I+ +L
Sbjct: 514 IEVNNRVHEFVAGDKLHPQSERIFEVL 540
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/507 (38%), Positives = 310/507 (61%), Gaps = 39/507 (7%)
Query: 31 HHHLPLLQK-CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
H HL +L+K CT + +++HA ++K ++ + + + I YA+LVF
Sbjct: 24 HPHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCAT-SPGGDINYAYLVFT 82
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDPDSFTYPILLKACGDLRQV- 147
QI +P+ F++NT+IRG++++ H I L+ M I + + P TYP + KA L
Sbjct: 83 QIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAH 142
Query: 148 --KGVHSLVVK-SKDFNSVIHSLTRLITFYCNF--------------------------- 177
+H V+K F+ I + + C F
Sbjct: 143 YGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLA 202
Query: 178 --GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
G+V ++ LFD+M +N V+W +MI+G+V+ RE +DLF +M++ ++ +E T+VS
Sbjct: 203 KCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVS 262
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
+L+A A LGA + G+W+H+++ KN LN + A++ DMY KCG I EA +VF++ K
Sbjct: 263 LLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKG 322
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
+ +WN++I GLA++GC EA+++F +++ S ++PDDVT + VLTAC+++GL++K KE F
Sbjct: 323 LSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFS 382
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
M + YK+EP++KHY C+VD L RA LL+EA E+IRNMP+ P+A++W SLL+AC
Sbjct: 383 LMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKH--- 439
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
NVELA+ A + ++ L+ + YVL+SNIYAA Q+++A + R MKE+ I K PGCS+
Sbjct: 440 GNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPGCSL 499
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSML 502
IE+N +HEF+ G HP ++E+YS+L
Sbjct: 500 IEVNGEIHEFVAGGRLHPQAQEVYSLL 526
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/525 (37%), Positives = 304/525 (57%), Gaps = 21/525 (4%)
Query: 6 VPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISD 65
+P S N + N++ +H L L+ +C+ Q KQ+HAQ+++ S
Sbjct: 11 LPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSA 70
Query: 66 TQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN 125
++L +L + YA VF+QI +P+ + +NT+IR YA + H+ + ++ +M+
Sbjct: 71 SRLIT-AAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQ 129
Query: 126 GLD-PDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
D PD FT+P L+KA +L ++ K H +V+K S + L LI FY G++
Sbjct: 130 SPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVL-LGSDVFILNSLIHFYAKCGELG 188
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
+F ++VV+W +MI V+ E ++LF++M V+ N +T+V VLSACA
Sbjct: 189 LGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACA 248
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
E G+WVH ++ +N I + L A+ DMY KCG +E+A R+F + EK++ +W +
Sbjct: 249 KKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTT 308
Query: 302 II------------GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
++ GLA+HG G++A+ +F +MQ +KP+ VT +L ACSH GL+E+
Sbjct: 309 MLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEE 368
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
G+ F M Y V P VKHY C+VD+L RA LL+EA E+I MPM P A +WG+LL AC
Sbjct: 369 GRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGAC 428
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
+ NV LAE A +LI+LEP N G YVL+SNIYA +WD +R+LM++ + K
Sbjct: 429 TIHE---NVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKK 485
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
PGCS IE++ +VHEF+VGD HP +++IY+ L+ + L Y
Sbjct: 486 EPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGY 530
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/516 (38%), Positives = 302/516 (58%), Gaps = 46/516 (8%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSS---QIAYAHLVFNQIIN 93
L C L Q+HAQ I SD +A I S S I YA +F +I
Sbjct: 42 LSSCKTLKDLTQIHAQTITTGI----FSDNFVASRILSFAALSPHGSIPYARFLFYRIRK 97
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL-DPDSFTYPILLKACGD---LRQVKG 149
P F NT+IR YA + + Y++M + + PD T+P+LLKAC + LR +
Sbjct: 98 PDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEA 157
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ-------------------- 189
+HS V K ++S + L+ Y + G ++SA L+FD+
Sbjct: 158 IHSHVFK-LGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCG 216
Query: 190 -----------MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
M +++VV+W+ MING+V++ ++EG+ LF+ M +E NE LV+ LS
Sbjct: 217 VFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALS 276
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
ACA+LGA E G+W+ ++ + + L +LG AL DMY+KCG +E AL VF + EKNV
Sbjct: 277 ACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLA 336
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
W+++I GLAI+G G++A+ +F QM+M G+KP++VT I +L ACSH+ L+++G F++M
Sbjct: 337 WSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMT 396
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
Y ++PN H+ C+VDL RA +LD+A VI++MP +PN+ +WG+LL AC D
Sbjct: 397 SIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGD---T 453
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
EL E +RL++L+P + G YVL+SNIYAA +WD ++RR+M+ER + K PGCS I++
Sbjct: 454 ELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDL 513
Query: 479 NDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
D +HEF+ GD HP E IY+ L ++ L+ Y
Sbjct: 514 GDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGY 549
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/512 (36%), Positives = 315/512 (61%), Gaps = 44/512 (8%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+P+L+ C ++V+ K++HA I+K S S + K+++ + + YA+L+F + +
Sbjct: 18 VPILKDCPNIVELKKIHAHIVKFSLSQ---SSFLVTKMVDVCNHYGETEYANLLFKGVAD 74
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-----LDPDSFTYPILLKACGDL---- 144
P+ F +N +IR Y + I +Y QM+GN + PD FT+P ++K+C L
Sbjct: 75 PNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYD 134
Query: 145 --RQVKG-VHSLVVKSK------------------DFNSVIHSLTR--------LITFYC 175
+QV G V KS D + V +T LI+ +
Sbjct: 135 LGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHV 194
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
G ++ A+ +F++M +K + +WTA+++G+ + Y + ++ FR+M+ G+E +E++LVS
Sbjct: 195 RLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVS 254
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
VL CA LGA ELGKW+H + +K + N + AL +MYAKCG I++ R+F + E++
Sbjct: 255 VLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERD 314
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
V +W+++I GLA HG EA+++F +MQ + I+P +T + +LTAC+HAGL+ +G F
Sbjct: 315 VISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFE 374
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+M+RDY +EP V+HYGCLV+LL + LD+A E+++ MP +P++ +WGSLL++C S
Sbjct: 375 SMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSH--- 431
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
N+++A IAME L++LEP + GNYVL+SN+YA +WD +MR+LM+ +++ K PGCS
Sbjct: 432 GNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSS 491
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
IE++++V EF GD P S+ I +L+ + +
Sbjct: 492 IEVDNMVQEFASGDDSKPFSKAICRVLKLLVM 523
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 313/513 (61%), Gaps = 14/513 (2%)
Query: 10 QLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA 69
+L N+ + N + L LLQ C L + Q+H I+K N + T+ A
Sbjct: 9 KLLRTINNVLASSTPNPRAPEQNCLALLQACNALPKLTQIHTHILKLGLHNNPLVLTKFA 68
Query: 70 KLIESLVNSSQIAYAHLVFNQIINP---STFAFNTVIRGYAEAGLGH-RGIQLYTQMIGN 125
I SL++++ A A +F+ + F FNT+IR YA+ G + + LY M+ +
Sbjct: 69 S-ISSLIHATDYA-ASFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHD 126
Query: 126 GLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFY-CNFGDVK 181
+ P+ FTYP +LKAC L + + VH VVK F+ IH ++ Y C G +
Sbjct: 127 AILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKF-GFDCDIHVQNTMVHMYSCCAGGIN 185
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
SA+ +FD+M + + VTW+AMI G+ + E + LFR+M+ + V +E+T+VS+LSAC
Sbjct: 186 SARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACT 245
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
+LGA ELGKW+ ++ ++ I ++ AL DM+AKCG I +AL++F+ + EK + +W S
Sbjct: 246 DLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTS 305
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+I G+A+HG G+EA +F +M SG+ PDDV I +L+ACSH+GL+E+G+E F +M + Y
Sbjct: 306 VIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKY 365
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
K+ P ++HYGC+VD+ CR L+ EA E +RNMP+EPN V+ +L++AC + +L
Sbjct: 366 KLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGE---FKLG 422
Query: 422 EIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
E + L+K EP ++ NYVL+SNIYA W+ K+R +M+ + + K PG ++IEI++
Sbjct: 423 EKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNE 482
Query: 482 VHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
++EF+ GD H +EIY M++ + +++ Y
Sbjct: 483 IYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGY 515
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/537 (39%), Positives = 321/537 (59%), Gaps = 47/537 (8%)
Query: 21 HKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ 80
HK S + P + +C KQ+HA IK + ++ +L K + +L +
Sbjct: 6 HKPSPSPNHPSSLFPQISRCKTTRHLKQIHAHFIKTGQIHHPLAAAELLKFL-TLSTQRE 64
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAG---LGH----RGIQLYTQMIGNGL-DPDSF 132
I YA F+QI +P+ F++NT+IR A++ L H + ++ M+ +GL +P+ F
Sbjct: 65 IKYARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKF 124
Query: 133 TYPILLKACGDLRQV---KGVHSLVVK----SKDF-----------------NSVIHSLT 168
T+P +LKAC L ++ K +H VVK S +F V+ T
Sbjct: 125 TFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQT 184
Query: 169 RL----------ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
RL I Y GD+++++ LFD M K+VV+W MI+G + +++E I++F
Sbjct: 185 RLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMF 244
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
M+ V N +TLVSVL A + LGA ELGKWVH F KN I ++D LG+AL DMY+KC
Sbjct: 245 HDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKC 304
Query: 279 GYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
G I++A++VF+ I +KN TW++IIGGLA+HG +A+ FW+MQ +G+ P DV I V
Sbjct: 305 GSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGV 364
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
L+ACSHAGL+E+G+ I+Y+M + P ++HYGC+VDLL RA L+EA ++I NMP++P
Sbjct: 365 LSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKP 424
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
+ V+ +LL AC N+E+ E + L+ P + G+YV +SN++A++ W+ K
Sbjct: 425 DDVILKALLGACKMH---GNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVK 481
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+R MKE +I K+PGCS IE++ V+HEF+V D HP +E I+SMLE ++ LR Y
Sbjct: 482 VRLKMKELDIRKDPGCSWIELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGY 538
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/475 (41%), Positives = 302/475 (63%), Gaps = 15/475 (3%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASF-DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
+L+ C+ + + QVHA I+K+ F N + +T LI+ N QI A VF+ +
Sbjct: 127 VLKACSRMKALREGEQVHALILKSGFKSNEFVENT----LIQMYANCGQIGVARHVFDGM 182
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVH 151
S A+N+++ GY + GL ++L+ +++ ++ D T +L ACG L ++ +
Sbjct: 183 PERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLE-IG 241
Query: 152 SLV---VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
L+ + SK T LI Y G V +A+ LFD+M +++VV W+AMI+G+ +
Sbjct: 242 ELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQA 301
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+E ++LF +M+ V NE+T+VSVL +CA LGA E GKWVH ++ K + L LG
Sbjct: 302 DRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLG 361
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
L D YAKCGYI+ ++ VFK + KNV TW ++I GLA +G G+ A++ F M + +K
Sbjct: 362 TQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVK 421
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
P+DVT I VL+ACSHA L+++G+ +F +MRRD+ +EP ++HYGC+VD+L RA L+EAY+
Sbjct: 422 PNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQ 481
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
I NMP PNAV+W +LL +C + N+E+AE ++E + +LEP + G+Y+L+SN YA
Sbjct: 482 FIDNMPFPPNAVVWRTLLASCRAH---KNIEMAEKSLEHITRLEPAHSGDYILLSNTYAL 538
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
+ +DA ++R L+KE+ I K PGCS+IE++ VVHEF DG H S+EI+ L+
Sbjct: 539 VGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALD 593
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 220/415 (53%), Gaps = 22/415 (5%)
Query: 6 VPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISD 65
+PN LT T + K+ +LQ+C +QVHA ++K R +
Sbjct: 8 LPNISLTSITQFPENPKSL-----------ILQQCKTPKDLQQVHAHLLKT---RRLLDP 53
Query: 66 TQLAKLIES--LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI 123
++ES L+ I YA +FN I P + A+N +IRG A + L+ +M
Sbjct: 54 IITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMH 113
Query: 124 GNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
+ D FT+ +LKAC LR+ + VH+L++KS F S LI Y N G +
Sbjct: 114 EKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKS-GFKSNEFVENTLIQMYANCGQI 172
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
A+ +FD M E+++V W +M++G+ K + E + LFRK+ + +E +++T++SVL AC
Sbjct: 173 GVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMAC 232
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
L E+G+ + E++ + N+ L +L DMYAKCG ++ A ++F + +++V W+
Sbjct: 233 GRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWS 292
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
++I G A +EA+ +F +MQ + P++VT+++VL +C+ G E GK + + +++
Sbjct: 293 AMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKK 352
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
K++ V L+D + +D + EV + M + N W +L+ A+ +G
Sbjct: 353 -KMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFK-NVFTWTALIQGLANNGEG 405
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/536 (38%), Positives = 314/536 (58%), Gaps = 43/536 (8%)
Query: 16 NSANSHKNSNTATKSHHHLP--LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE 73
S N ++ N +S L LL+ + +QVHAQIIK N +S L ++
Sbjct: 12 QSPNRNQIHNVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKT---NAPLSILPLTRVGL 68
Query: 74 SLVNSSQIAYAHLVFNQI--INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS 131
+ YA +F + P TF +N+ ++ AE I L+ ++ + PD+
Sbjct: 69 VCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDT 128
Query: 132 FTYPILLKACGDLRQVKGVHSL--VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
FT +L+AC +L + L VV+ F S ++ ++ Y + G++ A+LLF++
Sbjct: 129 FTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEK 188
Query: 190 MTEKNVVTW-------------------------------TAMINGHVKQKNYREGIDLF 218
M +++VVTW T+MI G+V+ +E I LF
Sbjct: 189 MPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLF 248
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
KM ++GV+ NE+T+V+VL+ACA+LGA +LG +HE+ N++ N ++ L DMY KC
Sbjct: 249 AKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKC 308
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G +EEA +VF+ + E+ V +W+++IGGLA+HG EEA+++F M GI+P+ VT I +L
Sbjct: 309 GCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLL 368
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
ACSH GLI +G+ F +M RDY + P ++HYGC+VDLL RA LL EA+E I NMPM+PN
Sbjct: 369 HACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPN 428
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
V+WG+LL AC NVE+AE A++ L++L+P NDG YV++SNIYA +W+D ++
Sbjct: 429 GVVWGALLGACRVHK---NVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARV 485
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
R+ MK+R + K PG S I ++ VVHEF+ G+ HP +E+I+ E + +R + Y
Sbjct: 486 RKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGY 541
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/489 (39%), Positives = 293/489 (59%), Gaps = 21/489 (4%)
Query: 40 CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYA--------HLVFNQI 91
C L + Q+HA I+K N + L K + N + I YA H
Sbjct: 28 CNTLSKLTQIHAFILKTGLQNNPLI---LTKFTSTSSNLNSIHYATSFLFPPSHTTSTPT 84
Query: 92 INPSTFAFNTVIRGYAEA-GLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQV 147
+ F FNT+IR Y++ Y M+ G+ P+ FT+P +LK C G LR
Sbjct: 85 PSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLG 144
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD--VKSAQLLFDQMTEKNVVTWTAMINGH 205
K VH VVK F +H L LI YC G+ + A+ +FD + + VTW+AMI G
Sbjct: 145 KCVHGCVVKF-GFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGF 203
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
V+ +DLFR+M+ GV +E+T+VSVLSACA+LGA ELGKWV +V K I +
Sbjct: 204 VRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSV 263
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
+L AL DM+AKCG +++A+++F+ + + + +W S+I GLA+HG G +AV +F +M +
Sbjct: 264 ELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVEN 323
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
GI PDDV I VL+ACSH+GL++KG+ F +M R++ + P V+HYGC+VDLLCR + E
Sbjct: 324 GITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKE 383
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
A+E ++ MP EPN ++W +++TAC + + ++L E + LIK EP ++ NYVL+SNI
Sbjct: 384 AFEFVQKMPFEPNQIIWRTIITACHATGE---LKLGESISKELIKSEPMHESNYVLLSNI 440
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
YA QW+ K+R +M R + K PG ++IE+N+ ++EF+ GD H +EIY M++ +
Sbjct: 441 YAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEM 500
Query: 506 AISLREECY 514
+++ Y
Sbjct: 501 GREIKKAGY 509
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/514 (38%), Positives = 306/514 (59%), Gaps = 41/514 (7%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI--IN 93
LL+ + +QVHAQIIK N +S L ++ + YA +F +
Sbjct: 34 LLRNFNSPFELRQVHAQIIKT---NAPLSILPLTRVGLVCAFTPSFHYAQQIFECVEKQK 90
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSL 153
P TF +N+ ++ AE I L+ ++ + PD+FT +L+AC +L + L
Sbjct: 91 PETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRIL 150
Query: 154 --VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW------------- 198
VV+ F S ++ ++ Y + G++ A+LLF++M +++VVTW
Sbjct: 151 HGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDH 210
Query: 199 ------------------TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
T+MI G+V+ +E I LF KM ++GV+ NE+T+V+VL+AC
Sbjct: 211 EGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAAC 270
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A+LGA +LG +HE+ N++ N ++ L DMY KCG +EEA +VF+ + E+ V +W+
Sbjct: 271 ADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWS 330
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
++IGGLA+HG EEA+++F M GI+P+ VT I +L ACSH GLI +G+ F +M RD
Sbjct: 331 AMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRD 390
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
Y + P ++HYGC+VDLL RA LL EA+E I NMPM+PN V+WG+LL AC NVE+
Sbjct: 391 YGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHK---NVEM 447
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
AE A++ L++L+P NDG YV++SNIYA +W+D ++R+ MK+R + K PG S I ++
Sbjct: 448 AEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDG 507
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
VVHEF+ G+ HP +E+I+ E + +R + Y
Sbjct: 508 VVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGY 541
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/530 (38%), Positives = 313/530 (59%), Gaps = 62/530 (11%)
Query: 40 CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAF 99
C KQ+HA IK ++ ++ K +S I YA VF Q+ P+ F +
Sbjct: 29 CKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCA--FSSRDIDYARAVFRQMPEPNCFCW 86
Query: 100 NTVIRGYAEAGLGH---RGIQLYTQMIGNG-LDPDSFTYPILLKACGD---LRQVKGVHS 152
NT++R AE H + L++ M+ +G + P+ FT+P +LKAC LR+ K +H
Sbjct: 87 NTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHG 146
Query: 153 LVVK----SKDFNSVIHSLTRLI----------TFYCN---------------------- 176
L+VK +F VI +L R+ + +C
Sbjct: 147 LIVKFGFHEDEF--VISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNV 204
Query: 177 ------------FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
GD+KSA+ LFD+M +++VV+W MI+G+ + ++ E I+LF++M+ S
Sbjct: 205 VLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSS 264
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
++ N +TLVSVL A A +GA ELGKW+H + KN I ++D LG+AL DMY+KCG I+EA
Sbjct: 265 NIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEA 324
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
L+VF+ + ++N TW++IIG A+HG E+A+ F M +G+ P+DV I +L+ACSHA
Sbjct: 325 LQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHA 384
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
GL+E+G+ F +M + ++P ++HYGC+VDLL RA L+EA E+IRNMP+EP+ V+W +
Sbjct: 385 GLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKA 444
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL AC N+++ E E L++L P + G+YV +SN+YA+ W+ ++R MK
Sbjct: 445 LLGACKMHK---NLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKG 501
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+I K+PGCS IEI+ ++HEF+V D H ++EI +ML +++ LR Y
Sbjct: 502 MDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGY 551
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/515 (39%), Positives = 301/515 (58%), Gaps = 28/515 (5%)
Query: 22 KNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQI 81
K NT + H + LLQ C H Q ++A+II+ +L ++ +L + I
Sbjct: 24 KPKNTPNRRRHFISLLQNCKHNNQIPPIYAKIIRNHHHQDPFVVFELLRVCSNL---NSI 80
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
YA +F+ NP+ + + +I G + GI LY QMI + L PDS+ +LKAC
Sbjct: 81 GYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKAC 140
Query: 142 G---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVT- 197
G L++ + VHS V+K +S +LI Y G + A+ +FD+M E++VV
Sbjct: 141 GCHLALKEGREVHSQVLK-LGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVAS 199
Query: 198 -----------------WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
WTAMI+G V+ +++FR M+ V NE+T+V VLSAC
Sbjct: 200 TVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSAC 259
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
+ LGA +LG+WV +++K+ I LN +G AL +MY++CG I+EA RVF+ + EKNV T+N
Sbjct: 260 SELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYN 319
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
S+I G A+HG EAV++F + G P VT + VL ACSH GL E G EIF++M +D
Sbjct: 320 SMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKD 379
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
Y +EP ++HYGC+VDLL R L+EAY IR M + P+ V+ G+LL+AC N+EL
Sbjct: 380 YGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIH---GNLEL 436
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
AE + L+ + + G Y+L+SN Y++ +W +A ++R M+E I K PGCS IE+N+
Sbjct: 437 AERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNN 496
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
+HEF++GD RHP E+IY LE + LR E Y
Sbjct: 497 EIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGYT 531
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 196/518 (37%), Positives = 301/518 (58%), Gaps = 41/518 (7%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+ +L CT Q KQVHA II+ + T+L +++ + V+ +Y LVF Q+
Sbjct: 46 MSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRML-TKVDVPMGSYPLLVFGQVNY 104
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGV 150
P+ F + +IRGYA GL YT+M +G+ P SFT+ L KACG ++ K V
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164
Query: 151 HSLVVKSKDFNSVIH-------------------------------SLTRLITFYCNFGD 179
H+ + F S ++ S T LI Y +GD
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGD 224
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
++SA LFD + K++V WTAM+ G+ + +E ++ F+KM+D G+E +E+TL V+SA
Sbjct: 225 MESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISA 284
Query: 240 CANLGASELGKWVHEFVNKNCIIL--NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
CA LGA + W+ + ++ N +G+AL DMY+KCG +EA +VF+++ E+NV
Sbjct: 285 CAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVF 344
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
+++S+I G A+HG A+++F M + I+P+ VT I +L+ACSHAGL+E+G+++F M
Sbjct: 345 SYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKM 404
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ + V P+ HY C+VDLL RA L+EA ++++ MPMEPN +WG+LL AC N
Sbjct: 405 EKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIH---GN 461
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
++A+IA L KLEP GNY+L+SNIYA+ +W++ K+R++++E+ KNPGCS E
Sbjct: 462 PDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFE 521
Query: 478 -INDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
N +H+F GD HP S EI L+ + LR Y
Sbjct: 522 GKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGY 559
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 203/523 (38%), Positives = 301/523 (57%), Gaps = 43/523 (8%)
Query: 32 HHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF-NQ 90
H+L LQKC V+ KQ+HA+++K+ + + K + ++SS +YAH VF N
Sbjct: 13 HNLSCLQKCPTEVELKQIHARMLKSGLLQDPYA---MTKFLSFCLSSSFSSYAHDVFFNG 69
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQV 147
P TF +N +IRG + + R + LY +M+ +++T+P LLKAC +L ++
Sbjct: 70 FDRPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQET 129
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE--------------- 192
+H+ + K + I+++ LI Y G+ K A LLFD++ E
Sbjct: 130 TQIHAHITKF-GYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVK 188
Query: 193 -----------------KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
N ++WT MI+G+V+ +E + LF +M++S V + ++L S
Sbjct: 189 AGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLAS 248
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
LSAC+ LGA E GKW+H + NK ++ L L DMYAKCG +EEAL VFK + K+
Sbjct: 249 ALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKS 308
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
V W ++I G A HG G EA+ F +MQ G+KP+ +T AVLTACS+ GL+E+GK +F
Sbjct: 309 VQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFN 368
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+ RDY ++P ++HYGC+VDLL RA LL+EA I+ MP++PNAV+WGSLL AC
Sbjct: 369 TIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHK-- 426
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
N+EL E E LI+++ + G YV M+NI+A +WD A + RRLM+E+ +VK PGCS
Sbjct: 427 -NIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSA 485
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
I + HEF+ GD H +EI + +V L E Y +
Sbjct: 486 ISLEGTTHEFLAGDRSHAEIQEIRTKWRFVRRKLEENGYVPEL 528
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/500 (38%), Positives = 301/500 (60%), Gaps = 40/500 (8%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
+L++C+ L Q K+VHAQI + + T+L +L+ +L + +Y L+F+Q+ P+
Sbjct: 14 ILERCSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPN 73
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHS 152
FA+ +IR YA G + + Y+ M + P SFT+ L AC +R +H+
Sbjct: 74 PFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHA 133
Query: 153 LVVKSKDFNSVIH-------------------------------SLTRLITFYCNFGDVK 181
+ F+S ++ S T LI Y GD++
Sbjct: 134 QTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMR 193
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
+A+ LFD + K++VTWTAM+ G+ + + +++FR++RD GVE++E+TLV V+SACA
Sbjct: 194 AARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACA 253
Query: 242 NLGASELGKWVHEFVNKNCIILNDKL--GAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
LGAS+ W+ + + + D + G+AL DMY+KCG +EEA VFK + E+NV ++
Sbjct: 254 QLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSY 313
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
+S+I G AIHG A+K+F+ M +G+KP+ VT + VLTACSHAGL+++G+++F +M +
Sbjct: 314 SSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEK 373
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
Y V P + Y C+ DLL RA L++A +++ MPME + +WG+LL A + N +
Sbjct: 374 CYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGA---SHVHGNPD 430
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI- 478
+AEIA +RL +LEP N GNY+L+SN YA+ +WDD K+R+L++E+N+ KNPG S +E
Sbjct: 431 VAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAK 490
Query: 479 NDVVHEFMVGDGRHPCSEEI 498
N ++H+F+ GD HP EI
Sbjct: 491 NGMIHKFVAGDVSHPKINEI 510
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 191/481 (39%), Positives = 302/481 (62%), Gaps = 14/481 (2%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIES--LVNSSQIAYAHLVFNQIINP 94
+++CT + K + A +++A+ T + KLIES + S +AYAH +F+ +P
Sbjct: 14 IKRCTRVGDLKAIQAHMVRANLTQDTFLTS---KLIESSAVTLSGHVAYAHRIFSCTHHP 70
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL-RQVKG--VH 151
+ F +NT+IRGY+ + I LY M G+ P+S+T+ +LKAC L R +G +H
Sbjct: 71 NLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELH 130
Query: 152 SLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
S +VK DF + + + LI Y G + A ++FD+M E + +W+ M++G+ +
Sbjct: 131 SQIVKVGLDFETPL--VNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQ 188
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E + LFR+M+ V + TL SV+ C +LGA +LGKWVH +++K + ++ LG A
Sbjct: 189 AVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTA 248
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L MY+KCG ++ AL+VF+ + E++V W+++I G AIHG GE+A+++F M+ S P+
Sbjct: 249 LVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPN 308
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
VT +VL+ACSH+GL+EKG +IF M +YK+ P +KHYGC+VDL CRA ++ A++ I
Sbjct: 309 CVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFI 368
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+ MP+EPN VLW +LL AC + +L E +++KL+P + NYVL+SN+YA+
Sbjct: 369 QTMPIEPNVVLWRTLLGACKTH---GYKDLGEHISRKILKLDPSSPENYVLVSNVYASLG 425
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+W ++R LMK++ K G S IEIN +VH+F++GD HP E+IY ML +A L+
Sbjct: 426 RWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLK 485
Query: 511 E 511
+
Sbjct: 486 Q 486
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/511 (36%), Positives = 308/511 (60%), Gaps = 48/511 (9%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
L+ C + Q K++HA ++K S S+ + K+++S N ++YA L+F Q+++P+
Sbjct: 17 LKNCFKITQLKKIHAHVVKLSLSQ---SNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNI 73
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIG---NGLDPDSFTYPILLKACGDL---RQVKGV 150
F +N +IR YA I ++ QM+ N + PD FT+P ++K+C + R V
Sbjct: 74 FTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQV 133
Query: 151 HSLVVKSKDFNSVIHSLTR--LITFYCNFGDV---------------------------- 180
H LV K F + H +T LI Y FGD+
Sbjct: 134 HGLVYK---FGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKL 190
Query: 181 ---KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
SA+ LFD M + +V+WT MI G+ + Y + +D+FR+M+ G+E +E+++++VL
Sbjct: 191 GQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVL 250
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
ACA LGA E+GKW+H + +KN + + AL +MYAKCG I+EA +F ++EK+V
Sbjct: 251 PACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVI 310
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
+W+++IGGLA HG G EA+++F +M + P+++T + VL ACSH GL ++G + F M
Sbjct: 311 SWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVM 370
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
Y +EP ++HYGCL+DLL R+ L +A + I MP++P++ +W SLL++C N
Sbjct: 371 SASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIH---RN 427
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
+++A IA+++L++LEP GNYVL++N+YA +W+D +R+L++ + I K PG S IE
Sbjct: 428 LQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIE 487
Query: 478 INDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
+N+VV EF+ D P S+E++ +LE +A++
Sbjct: 488 VNNVVQEFVSSDDSKPFSQEVFWILEGLALN 518
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/518 (37%), Positives = 300/518 (57%), Gaps = 41/518 (7%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+ +L CT Q KQVHA II+ + T+L +++ V+ +Y LVF Q+
Sbjct: 46 MSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTK-VDVPMGSYPLLVFGQVNY 104
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGV 150
P+ F + +IRGYA GL YT+M +G+ P SFT+ L KACG ++ K V
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164
Query: 151 HSLVVKSKDFNSVIH-------------------------------SLTRLITFYCNFGD 179
H+ + F S ++ S T LI Y +GD
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGD 224
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
++SA LFD + K++V WTAM+ G+ + +E ++ F+KM+D G+E +E+TL V+SA
Sbjct: 225 MESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISA 284
Query: 240 CANLGASELGKWVHEFVNKNCI--ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
CA LGA + W+ + ++ N +G+AL DMY+KCG +EA +VF+++ E+NV
Sbjct: 285 CAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVF 344
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
+++S+I G A+HG A+++F M + I+P+ VT I +L+ACSHAGL+E+G+++F M
Sbjct: 345 SYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKM 404
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ + V P+ HY C+VDLL RA L+EA ++++ MPMEPN +WG+LL AC N
Sbjct: 405 EKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIH---GN 461
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
++A+IA L KLEP GNY+L+SNIYA+ +W++ K+R++++E+ KNPGCS E
Sbjct: 462 PDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFE 521
Query: 478 -INDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
N +H+F GD HP S EI L+ + LR Y
Sbjct: 522 GKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGY 559
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 307/505 (60%), Gaps = 24/505 (4%)
Query: 28 TKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL- 86
+ +H L LL+KC L KQVHA +I T +++ L+ SS I + H
Sbjct: 7 SSNHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRI------LLISSTIVFTHAL 60
Query: 87 -VFNQIINPSTFAFNTVIRGYAE-AGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKACGD 143
+FN I NP+ F +NT+I A H LY++++ + L P+ FT+P L KACG
Sbjct: 61 SIFNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGS 120
Query: 144 ---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
LR + +H+ V+K + L+ +Y G V + + LF+Q+++ ++ +W +
Sbjct: 121 QPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNS 180
Query: 201 MINGHVKQKN--------YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
+++ +V E + LF +M+ S ++ NE+TLV+++SACA LGA G W
Sbjct: 181 ILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWA 240
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG 312
H +V K+ + LN +G AL DMY+KCG ++ A ++F + ++ +N++IGG AIHG G
Sbjct: 241 HVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYG 300
Query: 313 EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC 372
+A+ +F +M + G+ PDDVTL+ + +CSH GL+E+G ++F +M+ Y VEP ++HYGC
Sbjct: 301 HQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGC 360
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLE 432
LVDLL RA L EA E + NMPM+PNAV+W SLL A A N+E+ E+ ++ LI+LE
Sbjct: 361 LVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGA---ARVHGNLEIGEVVLKHLIQLE 417
Query: 433 PFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRH 492
P GNYVL+SN+YA+ +WDD ++R+LMK+ I K PG S++E+ +HEF++GD H
Sbjct: 418 PETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTH 477
Query: 493 PCSEEIYSMLEYVAISLREECYAAR 517
P S+EIY LE ++ L E + R
Sbjct: 478 PRSKEIYLKLEEMSRRLHEYGHKPR 502
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 192/513 (37%), Positives = 295/513 (57%), Gaps = 39/513 (7%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L+ K + Q+HA + + D+ I + +L + SL ++ Y+ +F + NPS
Sbjct: 36 LIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASL---GRLDYSVALFGRTQNPS 92
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVV 155
F + +I G+A GL + + Y QM+ G++P++FT+ +LK C + K +HS V
Sbjct: 93 VFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC-PIEPGKALHSQAV 151
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVT------------------ 197
K F+S ++ T L+ Y GDV SAQ LFD M EK++V+
Sbjct: 152 K-LGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAAR 210
Query: 198 -------------WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
W MI+G+ + E + LFR+M + + NE+T++SVLSAC LG
Sbjct: 211 VLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLG 270
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
A E G+WVH ++ N I N +G AL DMY+KCG +E+A VF + +K+V WNS+I
Sbjct: 271 ALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIV 330
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVE 364
G A+HG +EA+++F M G+ P ++T I +L+AC H+G + +G +IF M+ +Y +E
Sbjct: 331 GYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIE 390
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIA 424
P ++HYGC+V+LL RA +++AYE+++NM +EP+ VLWG+LL AC + L E
Sbjct: 391 PKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLH---GKIALGEKI 447
Query: 425 MERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHE 484
+E L+ N G Y+L+SNIYAA WD ++R +MK+ + K PGCS IE+N+ VHE
Sbjct: 448 VELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHE 507
Query: 485 FMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
F+ G HP +EIY MLE + L+ Y +
Sbjct: 508 FLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQ 540
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 191/491 (38%), Positives = 300/491 (61%), Gaps = 17/491 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYA-HLVFN--- 89
L +LQ C L + Q+H IIK F N + L K + N I YA LVF+
Sbjct: 11 LDILQACNTLPKLAQLHTHIIKLGFQNNPLV---LTKFTSASSNLDAIPYAMSLVFSVED 67
Query: 90 -QIINPSTFAFNTVIRGYAEAGLG-HRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV 147
++ + F F+T+IR YAE+ H I Y M+G G+ P+ + +P +LKAC LR +
Sbjct: 68 ARVYD--AFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDL 125
Query: 148 ---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMING 204
K VH +VK + + T + + C G ++ A+ LFD+M + + VTWTAMI G
Sbjct: 126 NLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGG 185
Query: 205 HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
+ + + LFRKM+ +GV +++T+VSVLSAC +LGA ELGKW+ ++ K ++
Sbjct: 186 YARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKT 245
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
+L AL DM+AKCG +++AL +F+ + ++ + +W S+I GLA+HG G EAV +F +M+
Sbjct: 246 VELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKA 305
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
SG+ P+D+ I +L+ACSH+GL+E+G++ F M R + + P ++HYGC+VDLL RA L+
Sbjct: 306 SGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVT 365
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSN 444
EA E + MP+EPN ++W +L++AC + ++L E ++LI+ EP ++ NYVL+SN
Sbjct: 366 EALEFVERMPIEPNPIIWRTLISACRVHGE---LKLGESISKQLIRNEPMHESNYVLLSN 422
Query: 445 IYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEY 504
IY W+ K+R M ++ I K PG ++IE+++ +HEF+VGD H EI M+
Sbjct: 423 IYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNE 482
Query: 505 VAISLREECYA 515
+ ++ YA
Sbjct: 483 MGREMKRAGYA 493
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 200/530 (37%), Positives = 312/530 (58%), Gaps = 62/530 (11%)
Query: 40 CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAF 99
C KQ+HA IK ++ ++ K +S I YA VF Q+ P+ F +
Sbjct: 29 CKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCA--FSSRDIDYARAVFRQMPEPNCFCW 86
Query: 100 NTVIRGYAEAGLGH---RGIQLYTQMIGNG-LDPDSFTYPILLKACGD---LRQVKGVHS 152
NT++R AE H + L++ M+ +G + P+ FT+P +LKAC LR+ K +H
Sbjct: 87 NTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHG 146
Query: 153 LVVK----SKDFNSVIHSLTRLI----------TFYCN---------------------- 176
L+VK +F VI +L R+ + +C
Sbjct: 147 LIVKFGFHEDEF--VISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNV 204
Query: 177 ------------FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
GD+KSA+ LFD+M ++VV+W MI+G+ + ++ E I+LF++M+ S
Sbjct: 205 VLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSS 264
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
++ N +TLVSVL A A +GA ELGKW+H + KN + ++D LG+AL DMY+KCG I++A
Sbjct: 265 NIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKA 324
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
L+VF+ + ++N TW++IIG A+HG E+A+ F M +G+ P+DV I +L+ACSHA
Sbjct: 325 LQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHA 384
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
GL+E+G+ F +M + ++P ++HYGC+VDLL RA L+EA E+IRNMP+EP+ V+W +
Sbjct: 385 GLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKA 444
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL AC N+++ E E L++L P + G+YV +SN+YA+ W+ ++R MK
Sbjct: 445 LLGACKMHK---NLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKG 501
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+I K+PGCS IEI+ ++HEF+V D H ++EI +ML +++ LR Y
Sbjct: 502 MDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGY 551
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/517 (37%), Positives = 306/517 (59%), Gaps = 41/517 (7%)
Query: 28 TKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLV 87
T S LL C H + Q+H ++ + D + +Q SL SS YA +
Sbjct: 22 TSSLQFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLSQFIDACTSLGLSS---YAFSI 78
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV 147
F+ +P +NT I+ ++ I LYT++ +GL PDS++ P +LKA L V
Sbjct: 79 FSNKTHPDLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAV 138
Query: 148 ---KGVHSLVVKSKDFNSVIHSLTRLITFY--CNF------------------------- 177
+ +H+ V S + ++ T LI Y C F
Sbjct: 139 EVGRQIHTQTVSSA-LDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAG 197
Query: 178 ----GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
G++KSA+ +F++M ++NV++WT +I G+ + E I+LFRKM+ VE +E+ +
Sbjct: 198 YVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAM 257
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
++VLSACA+LGA ELG+W+H ++ K+ + L AL DMYAK G I AL VF+ + +
Sbjct: 258 LAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQ 317
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K+V TW+++I LA+HG G EA+ MF +M+ + ++P++VT +A+L+ACSH G+++ G+
Sbjct: 318 KSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYY 377
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F M+ YK+EP ++HYGC++DLL RA L EA +++ +MP E NA++WGSLL A +
Sbjct: 378 FDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHR 437
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
D ELA++A++ L KLEP N GNYVL+SN YAA +W+++G +R+LM+ + K PG
Sbjct: 438 DA---ELAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVRKLMRNAGVKKAPGG 494
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
SVIEIN++V+EF+ GD EIY +L + + L+
Sbjct: 495 SVIEINNIVYEFLAGDMSDSQVHEIYHVLCKIILQLK 531
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 192/513 (37%), Positives = 311/513 (60%), Gaps = 16/513 (3%)
Query: 10 QLTHFTNSANSHKNSNTATK--SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQ 67
LT A H+ + A + S L L+ KCT L + KQ+ A IK +N T+
Sbjct: 13 SLTKLNTEAPRHEPNTAALEPPSSSILSLIPKCTSLRELKQIQAYTIKTHQNNPTV---- 68
Query: 68 LAKLIESLVNSSQIA---YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
L KLI ++ IA +AH +F++I P FNT+ RGYA R I L +Q++
Sbjct: 69 LTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLC 128
Query: 125 NGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
+GL PD +T+ LLKAC L+ + K +H L VK ++ LI Y DV
Sbjct: 129 SGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVK-LGVGDNMYVCPTLINMYTACNDVD 187
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
+A+ +FD++ E VV + A+I + E + LFR++++SG++ ++T++ LS+CA
Sbjct: 188 AARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCA 247
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
LGA +LG+W+HE+V KN K+ AL DMYAKCG +++A+ VFK + ++ W++
Sbjct: 248 LLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSA 307
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+I A HG G +A+ M +M+ + ++PD++T + +L ACSH GL+E+G E F++M +Y
Sbjct: 308 MIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEY 367
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
+ P++KHYGC++DLL RA L+EA + I +P++P +LW +LL++C+S NVE+A
Sbjct: 368 GIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSH---GNVEMA 424
Query: 422 EIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
++ ++R+ +L+ + G+YV++SN+ A +WDD +R++M ++ +K PGCS IE+N+V
Sbjct: 425 KLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNV 484
Query: 482 VHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
VHEF GDG H S ++ L+ + L+ Y
Sbjct: 485 VHEFFSGDGVHSTSTILHHALDELVKELKLAGY 517
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 309/507 (60%), Gaps = 40/507 (7%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
++ +P LQ+ ++K++HA II + T++ L + L + YA +FNQ
Sbjct: 11 NYFIPFLQRVKSRNEWKKIHACIIVHGLSQSSFMVTKMVDLCDKL---GDMDYATRLFNQ 67
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD-PDSFTYPILLKACGDL----- 144
+ NP+ F +N++IR Y L I++Y Q++ ++ PD FT+P + K+C L
Sbjct: 68 VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYL 127
Query: 145 -RQVKG-----------------------VHSLVVKSKDFNSV----IHSLTRLITFYCN 176
+QV G LV K F+ + + S L++ Y
Sbjct: 128 GKQVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYAR 187
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
G +K A+ LF M +K +V+WTAMI+G+ Y E +D FR+M+ +G+E +E++L+SV
Sbjct: 188 LGQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 247
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
L +CA+LG+ ELGKW+H + + ++ + AL +MY+KCG + +A+++F+ K+V
Sbjct: 248 LPSCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDV 307
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
+W+++I G A HG A + F +MQ + +KP+ +T + +L+ACSH GL ++G + F
Sbjct: 308 ISWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLKYFDM 367
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
MR+DY++EP ++HYGCL+D+L RA L+ A E+ + MP++P++ +WGSLL++C +
Sbjct: 368 MRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTK---G 424
Query: 417 NVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
N+++A +AM+ L+++EP + GNYVL++NIYA +W+D ++R+++++ N+ K PGCS+I
Sbjct: 425 NLDVALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKKTPGCSLI 484
Query: 477 EINDVVHEFMVGDGRHPCSEEIYSMLE 503
E+N++V EF+ GD P EI +L+
Sbjct: 485 EVNNIVQEFVAGDNSKPFWTEISLVLQ 511
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/521 (37%), Positives = 308/521 (59%), Gaps = 41/521 (7%)
Query: 23 NSNTATKSHHH--LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ 80
+SNT S + +L+ C ++ +HA+II+ D +L ++ +L
Sbjct: 20 DSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTL---DS 76
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
+ YA+ VF+ + NP+ + + +I G+ +G G+ LY +MI N + PD++ +LKA
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA 136
Query: 141 CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE-------- 192
C DL+ + +H+ V+K F S +++ Y G++ +A+ +FD+M +
Sbjct: 137 C-DLKVCREIHAQVLK-LGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATV 194
Query: 193 -----------------------KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
K+ V WTAMI+G V+ K + ++LFR+M+ V N
Sbjct: 195 MINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSAN 254
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
E T V VLSAC++LGA ELG+WVH FV + L++ +G AL +MY++CG I EA RVF+
Sbjct: 255 EFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFR 314
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
++ +K+V ++N++I GLA+HG EA+ F M G +P+ VTL+A+L ACSH GL++
Sbjct: 315 VMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDI 374
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
G E+F +M+R + VEP ++HYGC+VDLL R L+EAY I N+P+EP+ ++ G+LL+AC
Sbjct: 375 GLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSAC 434
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
N+EL E +RL + E + G YVL+SN+YA+ +W ++ ++R M++ I K
Sbjct: 435 KIH---GNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEK 491
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
PGCS IE+++ +HEF+VGD HP E IY L+ + LR
Sbjct: 492 EPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 200/522 (38%), Positives = 313/522 (59%), Gaps = 44/522 (8%)
Query: 30 SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLI--ESLVNSSQIAYAHLV 87
SH+ L LL KC +++ KQ+HA +I D ++K++ +L NS I Y++ V
Sbjct: 14 SHNLLSLLDKCKSILELKQLHAVVISCGLSQ---DDPFISKILCFSALSNSGDINYSYRV 70
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL-RQ 146
F+Q+ +P+ F++NT+IRGY+ + + + ++ +M+ G+ PD TYP L+KA L Q
Sbjct: 71 FSQLSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLVKASARLLNQ 130
Query: 147 VKGV--HSLVVK----SKDF--NSVIH------------------------SLTRLITFY 174
GV H+ ++K S F NS+IH S ++ Y
Sbjct: 131 ETGVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQKNVVSWNSMLDGY 190
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
G++ AQ F+ M+EK+V +W+++I+G+VK Y E + +F KM+ +G + NE+T+V
Sbjct: 191 AKCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKANEVTMV 250
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV--L 292
SV ACA++GA E G+ +++++ N + L L +L DMYAKCG IEEAL +F+ V
Sbjct: 251 SVSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLIFRRVSKS 310
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
+ +V WN++IGGLA HG EE++K+F +MQ+ GI PD+VT + +L AC+H GL+++
Sbjct: 311 QTDVLIWNAVIGGLATHGLVEESLKLFKEMQIVGICPDEVTYLCLLAACAHGGLVKEAWF 370
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
F ++ + + P +HY C+VD+L RA L AY+ I MP EP A + G+LL+ C
Sbjct: 371 FFESLSK-CGMTPTSEHYACMVDVLARAGQLTTAYQFICQMPTEPTASMLGALLSGCI-- 427
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
+ N+ LAEI +LI+LEP +DG Y+ +SN+YA +WDDA MR M+ R + K+PG
Sbjct: 428 -NHRNLALAEIVGRKLIELEPNHDGRYIGLSNMYAVDKRWDDARSMREAMERRGVKKSPG 486
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
S +EI+ V+H F+ D HP SEE Y ML +V ++ C+
Sbjct: 487 FSFVEISGVLHRFIAHDKTHPDSEETYFMLNFVVYQMKLSCH 528
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/520 (37%), Positives = 307/520 (59%), Gaps = 13/520 (2%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFK---QVHAQIIKAS 57
M++ LV N +S + + S +L+ C ++ + ++H+ ++KA
Sbjct: 79 MIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAG 138
Query: 58 FDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQ 117
+ L L I A VF+ I + + ++ I GY G I
Sbjct: 139 CEADAFVKISLINL---YTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAID 195
Query: 118 LYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFY 174
++ +++ GL PDSF+ +L AC GDLR + + + ++ +V + T L+ FY
Sbjct: 196 MFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVA-TALVDFY 254
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
G+++ A+ +FD M EKN+V+W++MI G+ +E +DLF KM + G++ + +V
Sbjct: 255 GKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMV 314
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
VL +CA LGA ELG W +N N + N LG AL DMYAKCG ++ A VF+ + +K
Sbjct: 315 GVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKK 374
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
+ WN+ I GLA+ G ++A+ +F QM+ SGIKPD T + +L AC+HAGL+E+G+ F
Sbjct: 375 DRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYF 434
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
+M + + P ++HYGC+VDLL RA LDEA+++I++MPME NA++WG+LL C D
Sbjct: 435 NSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRD 494
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
+L E+ +++LI LEP++ GNYVL+SNIYAA +W++A K+R +M ER + K PG S
Sbjct: 495 ---TQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYS 551
Query: 475 VIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
IE++ VVH+F+VGD HP SE+IY+ L +A L+ Y
Sbjct: 552 WIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGY 591
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 204/378 (53%), Gaps = 9/378 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L+Q + L K +HA +++ D T L K++ N Y+ + +Q P+
Sbjct: 16 LIQGFSCLKHLKHIHAALLRLGLDEDTY---LLNKVLRFSFNFGNTNYSFRILDQTKEPN 72
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK-GV--HS 152
F FNT+IRG I++Y M GL PDSFT+P +LKAC + + GV HS
Sbjct: 73 IFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHS 132
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
LVVK+ ++ LI Y G + +A +FD + +KN +WTA I+G+V R
Sbjct: 133 LVVKAGCEADAFVKIS-LINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCR 191
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E ID+FR++ + G+ + +LV VLSAC G G+W+ E++ +N ++ N + AL
Sbjct: 192 EAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALV 251
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
D Y KCG +E A VF +LEKN+ +W+S+I G A +G +EA+ +F++M G+KPD
Sbjct: 252 DFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCY 311
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
++ VL +C+ G +E G + N+ + N L+D+ + +D A+EV R
Sbjct: 312 AMVGVLCSCARLGALELG-DWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRG 370
Query: 393 MPMEPNAVLWGSLLTACA 410
M + + V+W + ++ A
Sbjct: 371 M-RKKDRVVWNAAISGLA 387
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 139/275 (50%), Gaps = 3/275 (1%)
Query: 137 LLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVV 196
L++ L+ +K +H+ +++ + + L +++ F NFG+ + + DQ E N+
Sbjct: 16 LIQGFSCLKHLKHIHAALLR-LGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIF 74
Query: 197 TWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV 256
+ MI G V ++E I+++ MR G+ + T VL ACA + SELG +H V
Sbjct: 75 LFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLV 134
Query: 257 NKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAV 316
K + + +L ++Y KCG+I+ A +VF + +KN +W + I G G EA+
Sbjct: 135 VKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAI 194
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDL 376
MF ++ G++PD +L+ VL+AC G + G+ I + + V NV LVD
Sbjct: 195 DMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVR-NVFVATALVDF 253
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
+ ++ A V M +E N V W S++ AS
Sbjct: 254 YGKCGNMERARSVFDGM-LEKNIVSWSSMIQGYAS 287
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/506 (38%), Positives = 307/506 (60%), Gaps = 47/506 (9%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+++H I+K F + L L SL S +++ A VF++ +N +I GY
Sbjct: 139 RELHDHIVKLGFSSNVFVQNALIHLY-SL--SGEVSVARGVFDRSSKGDVVTWNVMISGY 195
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLV--------- 154
+ ++L+ +M + P S T +L AC L+ + K VH V
Sbjct: 196 NRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVR 255
Query: 155 -------------------------VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
+KS+D + S T ++T + N G V A+ FD+
Sbjct: 256 VLENALIDMYAACGDMDTALGIFDNMKSRD----VISWTAIVTGFTNLGQVGLARNYFDK 311
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
M E++ V+WTAMI+G+++ ++E + LFR+M+ + ++ +E T+VS+L+ACA+LGA ELG
Sbjct: 312 MPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELG 371
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
+W+ +++KN I ++ +G AL DMY CG +E+A+R+F + ++ +W ++I GLAI+
Sbjct: 372 EWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAIN 431
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
G GEEA+ MF QM + I PD+VT I VL AC+H+G+++KGK+ F M + +EPNV H
Sbjct: 432 GYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAH 491
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
YGC+VDLL RA L EA+EVI+NMP++PN+++WGSLL AC D E+AE+A ++++
Sbjct: 492 YGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDE---EMAEMAAQQIL 548
Query: 430 KLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGD 489
+LEP N YVL+ NIYAA +W+ ++R+LM +R I K PGCS+IE+N VHEF+ GD
Sbjct: 549 ELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGD 608
Query: 490 GRHPCSEEIYSMLEYVAISLREECYA 515
HP S+EIYS L+ +++ L+ Y+
Sbjct: 609 QVHPQSKEIYSKLDEMSVDLKFAGYS 634
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 206/412 (50%), Gaps = 40/412 (9%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L L++ C + Q KQ+H+Q I + I Q+ + YA +VF+ +
Sbjct: 23 LSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFC-CKHELGDMEYARMVFDTMPG 81
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GV 150
P+ F +N +I+GY+ G + + +Y +M+ G+ PD +TYP LLK VK +
Sbjct: 82 PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGREL 141
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H +VK F+S + LI Y G+V A+ +FD+ ++ +VVTW MI+G+ + K
Sbjct: 142 HDHIVK-LGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQ 200
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
+ E + LF +M V + +TLVSVLSAC+ L +GK VH +V I L A
Sbjct: 201 FDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENA 260
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG-CG----------------- 312
L DMYA CG ++ AL +F + ++V +W +I+ G G G
Sbjct: 261 LIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSW 320
Query: 313 -------------EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMR 358
+E + +F +MQ + IKPD+ T++++LTAC+H G +E G+ I Y +
Sbjct: 321 TAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDK 380
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ K++ V + L+D+ +++A + MP + + W +++ A
Sbjct: 381 NEIKIDSFVGN--ALIDMYFNCGNVEKAIRIFNAMPHR-DKISWTAVIFGLA 429
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 105/267 (39%), Gaps = 44/267 (16%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA--KLIESLVNSSQIAYAHLVFNQIIN 93
+L C HL + + IKA D I LI+ N + A +FN + +
Sbjct: 358 ILTACAHLGALEL--GEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPH 415
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHS- 152
++ VI G A G G + +++QM+ + PD T +L AC HS
Sbjct: 416 RDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCAC--------THSG 467
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
+V K K F R+ T E NV + M++ + + +
Sbjct: 468 MVDKGKKF------FARMTT---------------QHGIEPNVAHYGCMVDLLGRAGHLK 506
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA-- 270
E ++ + M V+ N + S+L AC E+ E + + L + GA
Sbjct: 507 EAHEVIKNM---PVKPNSIVWGSLLGACRVHRDEEMA----EMAAQQILELEPENGAVYV 559
Query: 271 -LTDMYAKCGYIEEALRVFKIVLEKNV 296
L ++YA C E+ V K+++++ +
Sbjct: 560 LLCNIYAACNRWEKLHEVRKLMMDRGI 586
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/511 (40%), Positives = 295/511 (57%), Gaps = 40/511 (7%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L L C L KQVHAQII + N + LA L + +AYA +F+ + N
Sbjct: 71 LSLFNPCKTLRHLKQVHAQII--THHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQN 128
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---V 150
P +N++IR + + + LY M+ +GL PD TYP ++KAC + V
Sbjct: 129 PPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLV 188
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ-- 208
H+ VVKS F + ++ LI Y N D+ +A+ LF+ + ++VV+W AMI+G+VK
Sbjct: 189 HTHVVKS-GFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVE 247
Query: 209 -----------------------------KNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
E + LF +MR GV+ E T+VS+LSA
Sbjct: 248 MGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSA 307
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
CA+LGA + G +H ++N N I +N +G AL DMYAKCG I A +VF + K+V W
Sbjct: 308 CAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAW 367
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N+II G+AIHG +EA ++F +M+ +G++P+D+T +A+L+ACSHAG++++G+++ M
Sbjct: 368 NTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSS 427
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
Y +EP V+HYGC++DLL RA L+EA E+I MPMEPN G+LL C N E
Sbjct: 428 SYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIH---GNFE 484
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
L E+ +RLI L+P + G Y+L+SNIYAA +WDDA K+R LMK I K PG SVIE+
Sbjct: 485 LGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELK 544
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+VH F+ GD HP S +IY L + L+
Sbjct: 545 GMVHRFVAGDWSHPESNKIYEKLNEIHTRLK 575
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 187/510 (36%), Positives = 310/510 (60%), Gaps = 46/510 (9%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+P+LQ C ++V+ K +HA +IK S S + K+++ + + YA L+F Q+
Sbjct: 18 VPILQNCKNIVELKSIHAHVIKYSLSQ---SSFLVTKMVDVCDKTEDLGYASLLFKQVKE 74
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-------GNGLDPDSFTYPILLKACGDL-- 144
P+ + +N +IR + + I Y +M+ N + PD FT+P ++K+C L
Sbjct: 75 PNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVC 134
Query: 145 -RQVKGVH--------------------------SLVVKSKDFNSVIH----SLTRLITF 173
K VH SL+ K F+ ++ S +I+
Sbjct: 135 YNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISG 194
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
+ G ++ A LFD M + +V+WTAMI+G+ + +Y + + +FR+M+ GVE +E+++
Sbjct: 195 HVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISI 254
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
+SVL ACA LGA E+GKW+H + ++N ++ + AL +MY+KCG I +A ++F + +
Sbjct: 255 ISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSK 314
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
+V +W+++IGGLA HG EA+++F +M+ + I+P+ +T + +L+AC+HAG +G
Sbjct: 315 GDVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAY 374
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F +M +DY +EP V+HYGCLVD+L RA L +A +VI MPM+P++ +WGSLL++C +
Sbjct: 375 FDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTH- 433
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
+N+++A IAME L +LEP + GNYVL+SNIYA A+WD +MR+L+K +++ K PG
Sbjct: 434 --SNLDIAIIAMEHLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGS 491
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
S+I+IN+VV EF+ D P S +I+ +LE
Sbjct: 492 SLIDINNVVQEFVSWDDSKPFSRDIFWLLE 521
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 156/356 (43%), Gaps = 77/356 (21%)
Query: 130 DSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
++F PIL + C ++ ++K +H+ V+K S +T+++ D+ A LLF Q
Sbjct: 14 ENFFVPIL-QNCKNIVELKSIHAHVIKYSLSQSSF-LVTKMVDVCDKTEDLGYASLLFKQ 71
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-------RDSGVEVNELTLVSVLSACAN 242
+ E N + AMI H K Y I +++M ++ + + T V+ +C+
Sbjct: 72 VKEPNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSG 131
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
L LGK VH + K N + AL DMY KC + +A +VF ++E++ +WNSI
Sbjct: 132 LVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSI 191
Query: 303 IGGLAIHGCGE---------------------------------EAVKMFWQMQMSGIKP 329
I G G G+ +A+ +F QMQ+ G++P
Sbjct: 192 ISGHV--GVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEP 249
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRR------------------------------ 359
D++++I+VL AC+ G +E GK I R
Sbjct: 250 DEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLF 309
Query: 360 DYKVEPNVKHYGCLVDLLC---RARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
D + +V + ++ L +AR E ++ ++ +EPN + + LL+ACA A
Sbjct: 310 DQMSKGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHA 365
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 192/506 (37%), Positives = 299/506 (59%), Gaps = 15/506 (2%)
Query: 16 NSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQ-LAKLIES 74
S + H + T L L KCT L + KQ+ A IK N D Q L KLI S
Sbjct: 12 QSPSQHSSYYNTTYPSSLLSCLPKCTSLKELKQIQAFSIKTHLQN----DLQILTKLINS 67
Query: 75 LVNSSQIA---YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS 131
+ A YAH +F I P FN++ RGY+ + + I L+ + + L PD
Sbjct: 68 CTQNPTTASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDD 127
Query: 132 FTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
+T+P LLKAC +Q K +H L +K N + LI Y DV AQ +FD
Sbjct: 128 YTFPSLLKACVVAKAFQQGKQLHCLAIK-LGLNENPYVCPTLINMYAGCNDVDGAQRVFD 186
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
++ E VV++ A+I G+ + E + LFR+++ ++ N++T++SVLS+CA LGA +L
Sbjct: 187 EILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDL 246
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
GKW+HE+V KN + K+ AL DMYAKCG ++ A+ VF+ + ++ W+++I A+
Sbjct: 247 GKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAM 306
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
HG G++ + MF +M + ++PD++T + +L ACSH GL+++G FY+M Y + P +K
Sbjct: 307 HGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIK 366
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HYGC+VDLL RA LL EAY+ I +P++P +LW +LL++C+S N+ELA+ M ++
Sbjct: 367 HYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSH---GNLELAKQVMNQI 423
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
++L+ + G+YV++SN+ A +W+D +R+LM + VK PGCS IE+++VVHEF G
Sbjct: 424 LELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSG 483
Query: 489 DGRHPCSEEIYSMLEYVAISLREECY 514
DG H S ++ L+ + L+ Y
Sbjct: 484 DGVHYVSTALHRALDELVKELKSVGY 509
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 204/544 (37%), Positives = 311/544 (57%), Gaps = 50/544 (9%)
Query: 5 LVPNSQLTHFTNSANSHKNSNTATKSHHHLP-LLQKCTHLV---QFKQVHAQIIKASFDN 60
L P L F S N+ T P LL+ C L + KQ+HA ++K F
Sbjct: 108 LSPALALVFFVRMIYSGVEPNSYT-----FPFLLKSCAKLASAHEGKQIHAHVLKLGF-- 160
Query: 61 RTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLY 119
+SD + LI S ++ A LVF+Q +F +I GYA G R QL+
Sbjct: 161 --VSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLF 218
Query: 120 TQM-----------------IGNG--------------LDPDSFTYPILLKACGDLRQVK 148
+M +G + P+ T +L AC +
Sbjct: 219 DEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALD 278
Query: 149 GVHSLV--VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+S+ ++ + S + + LI Y GD+++A+ LFD M E++V++W MI G+
Sbjct: 279 LGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYT 338
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+Y+E + LFR+M SGVE E+T +S+L +CA+LGA +LGKW+H ++NKN ++
Sbjct: 339 HMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTS 398
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
L +L D+YAKCG I A +VF + K++ +WN++I GLA+HG ++A ++F +M G
Sbjct: 399 LSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDG 458
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
I+P+++T + +L+AC HAGL++ G++ F +M +DYK+ P +HYGC++DLL RA L +EA
Sbjct: 459 IEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEA 518
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
+++NM ++P+ +WGSLL AC D VEL E+ ERL +LEP N G YVL+SNIY
Sbjct: 519 ESLLQNMEVKPDGAIWGSLLGACR---DHGRVELGELVAERLFELEPDNPGAYVLLSNIY 575
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
A +WDD ++R + +R + K PGC+ IE+++VVHEF+VGD HP SE+IY MLE V
Sbjct: 576 AGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVD 635
Query: 507 ISLR 510
L+
Sbjct: 636 EQLK 639
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/454 (31%), Positives = 229/454 (50%), Gaps = 75/454 (16%)
Query: 29 KSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHL 86
+ H L LL KC + FKQ+HA IIK N + L+KLIE ++ S I+YA
Sbjct: 28 QEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFA---LSKLIEFSAVSRSGDISYAIS 84
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL-- 144
+FN I P+ F +N++IRG + + + + +MI +G++P+S+T+P LLK+C L
Sbjct: 85 LFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLAS 144
Query: 145 -RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ-------------- 189
+ K +H+ V+K F S + T LI Y G++ +AQL+FDQ
Sbjct: 145 AHEGKQIHAHVLK-LGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIA 203
Query: 190 -----------------MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
M K+VV+W AMI G+ + +E + LF MR + V NE T
Sbjct: 204 GYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNEST 263
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
+VSVLSACA A +LG + ++ + N KL AL DMY+KCG ++ A +F +L
Sbjct: 264 IVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDML 323
Query: 293 EKNVCTWNSIIGGLAIHGCG-EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
E++V +WN +IGG H C +EA+ +F +M SG++P ++T +++L +C+H G I+ GK
Sbjct: 324 ERDVISWNVMIGGYT-HMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGK 382
Query: 352 EIFYNMRRDYKVEP---------------------------NVKHYGCLVDLLCRARL-- 382
I + +++ +K ++C +
Sbjct: 383 WIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHG 442
Query: 383 -LDEAYEVIRNMP---MEPNAVLWGSLLTACASA 412
D+A+E+ M +EPN + + +L+AC A
Sbjct: 443 QADKAFELFSKMSSDGIEPNEITFVGILSACKHA 476
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 203/518 (39%), Positives = 296/518 (57%), Gaps = 48/518 (9%)
Query: 38 QKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTF 97
K TH Q+HA +++ + I + +L + SL + ++ +F++ NP+ F
Sbjct: 33 SKSTH--HLLQIHAALLRRGLHHHPILNFKLQRSYASL---GHLHHSVTLFHRTPNPNVF 87
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKS 157
+ +I +A L H + Y+QM+ + + P++FT LLKAC L + VHS +K
Sbjct: 88 LWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKAC-TLHPARAVHSHAIKF 146
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE------------------------- 192
+S ++ T L+ Y GDV SAQ LFD M E
Sbjct: 147 -GLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVL 205
Query: 193 ------KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG-------VEVNELTLVSVLSA 239
K+VV W MI+G+ + E + FRKM V NE+T+V+VLS+
Sbjct: 206 FEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSS 265
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
C +GA E GKWVH +V N I +N ++G AL DMY KCG +E+A +VF ++ K+V W
Sbjct: 266 CGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAW 325
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
NS+I G IHG +EA+++F +M G+KP D+T +AVLTAC+HAGL+ KG E+F +M+
Sbjct: 326 NSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKD 385
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
Y +EP V+HYGC+V+LL RA + EAY+++R+M +EP+ VLWG+LL AC +NV
Sbjct: 386 GYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIH---SNVS 442
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
L E E L+ + G YVL+SN+YAA W K+R +MK + K PGCS IE+
Sbjct: 443 LGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVK 502
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
+ VHEF+ GD RHP S++IYSMLE + L+E Y +
Sbjct: 503 NRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPK 540
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 201/533 (37%), Positives = 313/533 (58%), Gaps = 60/533 (11%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+P ++ C + + KQVHA ++K + T++ +L + + I YA VF+Q+
Sbjct: 19 VPQIKACKSMRELKQVHAFLVKTGQTHDNAIATEILRL-SATSDFRDIGYALSVFDQLPE 77
Query: 94 PSTFAFNTVIRGYAEAGLGH-RGIQLYTQMIGNG-LDPDSFTYPILLKACG---DLRQVK 148
+ FA+NTVIR AE H + ++ QM+ ++P+ FT+P +LKAC L + K
Sbjct: 78 RNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGK 137
Query: 149 GVHSLVVK------------------------------------------------SKDF 160
VH L++K ++F
Sbjct: 138 QVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREF 197
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
N V+ ++ ++ Y G++K+A+ LFD+M +++VV+W MI+G+ + Y+E I++F +
Sbjct: 198 NVVLCNV--MVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHR 255
Query: 221 MRDSG-VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
M G V N +TLVSVL A + LG ELGKWVH + KN I ++D LG+AL DMYAKCG
Sbjct: 256 MMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCG 315
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
IE+A++VF+ + + NV TWN++IGGLA+HG + +M+ GI P DVT IA+L+
Sbjct: 316 SIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILS 375
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSHAGL+++G+ F +M ++P ++HYGC+VDLL RA L+EA E+I NMPM+P+
Sbjct: 376 ACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDD 435
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
V+W +LL A N+++ A E L+++ P + G YV +SN+YA+ WD +R
Sbjct: 436 VIWKALLGASKMH---KNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVR 492
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
+MK+ +I K+PGCS IEI+ V+HEF+V D H +++I+SMLE ++ L E
Sbjct: 493 LMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLE 545
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/508 (38%), Positives = 294/508 (57%), Gaps = 45/508 (8%)
Query: 36 LLQKCTHL---VQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ-- 90
LL+ C + + KQ+H ++K ++ T L I + ++ YA LVF++
Sbjct: 138 LLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSL---INMYAQNGELGYAELVFSKSS 194
Query: 91 ---------IINPSTF--------------------AFNTVIRGYAEAGLGHRGIQLYTQ 121
+I T ++N +I GYA++G + + +
Sbjct: 195 LRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQE 254
Query: 122 MIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG 178
M + P+ T +L AC G L V S + + S + + LI Y G
Sbjct: 255 MKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWI-EDHGLGSNLRLVNALIDMYSKCG 313
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
D+ A+ LF+ + EK++++W MI G+ +Y+E + LFRKM+ S VE N++T VS+L
Sbjct: 314 DLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILP 373
Query: 239 ACANLGASELGKWVHEFVNKNCIIL-NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
ACA LGA +LGKW+H +++K + L N L +L DMYAKCG IE A +VF + K++
Sbjct: 374 ACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG 433
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
+WN++I GLA+HG A+++F QM+ G +PDD+T + VL+ACSHAGL+E G++ F +M
Sbjct: 434 SWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSM 493
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
DY + P ++HYGC++DLL RA L DEA +++NM M+P+ +WGSLL AC N
Sbjct: 494 VEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVH---GN 550
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
VEL E A + L +LEP N G YVL+SNIYA +WDD ++R + ++ + K PGCS IE
Sbjct: 551 VELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIE 610
Query: 478 INDVVHEFMVGDGRHPCSEEIYSMLEYV 505
++ VVHEF+VGD H S++IY ML+ +
Sbjct: 611 VDSVVHEFLVGDKVHEQSQDIYKMLDEI 638
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 229/418 (54%), Gaps = 41/418 (9%)
Query: 29 KSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHL 86
++H L LL C KQ+H+QIIK N + L+KLIE ++ ++YA L
Sbjct: 31 QNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFA---LSKLIEFCAISPFGNLSYALL 87
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GD 143
+F I P+ F +NT+IRG + + I Y +M+ G++P+S+T+P LLK+C G
Sbjct: 88 LFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGA 147
Query: 144 LRQVKGVHSLVVK----SKDF--NSVIH------------------------SLTRLITF 173
++ K +H V+K S F S+I+ S T LIT
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y G + A+ LF+++ ++ V+W AMI G+ + + E + F++M+ + V NE T+
Sbjct: 208 YTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
V+VLSACA G+ ELG WV ++ + + N +L AL DMY+KCG +++A +F+ + E
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K++ +WN +IGG + +EA+ +F +MQ S ++P+DVT +++L AC++ G ++ GK I
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV-LWGSLLTACA 410
+ + + N + L+D+ + ++ A +V M+P ++ W ++++ A
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAG--MKPKSLGSWNAMISGLA 443
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 189/461 (40%), Positives = 293/461 (63%), Gaps = 11/461 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
++ H +++K F + + LI+ N A VF++ +N +I +
Sbjct: 131 RRFHCEVLKNGFGSDLFV---INALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAH 187
Query: 107 AEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNS 162
GL + L +M + L PD T L+ AC G+L + K +HS K +
Sbjct: 188 LNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHS-YSKELGLDE 246
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ ++ YC D++SAQ +F+++ EK+V++WT+M++G K ++E + LF+KM+
Sbjct: 247 NLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQ 306
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ +E++E+TLV VLSACA GA + GK++H ++K I + L AL DMYAKCG I+
Sbjct: 307 LNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSID 366
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
AL+VF+ + +NV TWN++IGGLA+HG GE+A+ +F QM+ + PDDVT IA+L ACS
Sbjct: 367 LALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACS 426
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
HAGL+++G +F M+ +++EP ++HYGC+VDLLCRAR +D+A I NMP++ N+VLW
Sbjct: 427 HAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLW 486
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
+LL AC S G + +LAE R+I+LEP + G YV++SN+YA +QWD A K+R+ M
Sbjct: 487 ATLLGACRS---GGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQM 543
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
K + I K PGCS IE+N ++H+F+ GD H +E+IY+M+E
Sbjct: 544 KNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIE 584
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 213/382 (55%), Gaps = 8/382 (2%)
Query: 40 CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAF 99
CT + + KQ HA +++ + + ++L + +L +S + YA +F Q+ NP F
Sbjct: 21 CTSISKTKQAHALLLRTHLLHNPLFSSKLISFL-ALSHSGDLNYARKLFTQMQNPDPFIC 79
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVK 156
NT+IRGYA + + + LY M+ G+ D++TYP +L AC L VK H V+K
Sbjct: 80 NTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLK 139
Query: 157 SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID 216
+ F S + + LI FY N G A +FD+ T ++VVTW MIN H+ + + D
Sbjct: 140 N-GFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFD 198
Query: 217 LFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
L +M + + +E+T+VS++ ACA LG E GK++H + + + N ++ A+ DMY
Sbjct: 199 LLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMY 258
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
KC IE A VF + EK+V +W S++ GLA G +EA+ +F +MQ++ I+ D++TL+
Sbjct: 259 CKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLV 318
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
VL+AC+ G +++GK I + + +++ ++ LVD+ + +D A +V R M +
Sbjct: 319 GVLSACAQTGALDQGKYIHLLIDK-FEINCDLVLETALVDMYAKCGSIDLALQVFRRMRV 377
Query: 396 EPNAVLWGSLLTACASADDGAN 417
N W +L+ A G +
Sbjct: 378 R-NVFTWNALIGGLAMHGHGED 398
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 290/490 (59%), Gaps = 15/490 (3%)
Query: 21 HKNSNTATKSHHHLPLLQKCTHLVQF---KQVHAQIIKASFDNRTISDT-QLAKLIESLV 76
H S H L+ C+ + + V A +K ++D L+ LI
Sbjct: 111 HAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGL----VADRFVLSSLIHMYA 166
Query: 77 NSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPI 136
+ +A A LVF+ +N ++ Y + G ++++ M+ G+ D T
Sbjct: 167 SCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVS 226
Query: 137 LLKACGDLRQVKGVHSLVVKSKDFNSVIHS---LTRLITFYCNFGDVKSAQLLFDQMTEK 193
++ ACG + K + V D + + +T L+ Y G++ A+ LFD M +
Sbjct: 227 VVTACGRIGDAK-LGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSR 285
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
+VV W+AMI+G+ + RE + LF +M+ + VE N++T+VSVLSACA LGA E GKWVH
Sbjct: 286 DVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVH 345
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
+V + + L LG AL D YAKCG I++A+ F+ + KN TW ++I G+A +G G
Sbjct: 346 SYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGR 405
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
EA+++F M+ +GI+P DVT I VL ACSH+ L+E+G+ F +M RDY ++P V+HYGC+
Sbjct: 406 EALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCM 465
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
VDLL RA L+DEAY+ IR MP+EPNAV+W +LL++CA NV + E A++++I L P
Sbjct: 466 VDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHR---NVGIGEEALKQIISLNP 522
Query: 434 FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHP 493
+ G+YVL+SNIYA+ QW DA +R+ MK+R I K PGCS+IE++ VV EF D HP
Sbjct: 523 SHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHP 582
Query: 494 CSEEIYSMLE 503
EIY +E
Sbjct: 583 ELREIYQKVE 592
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 193/496 (38%), Positives = 299/496 (60%), Gaps = 20/496 (4%)
Query: 17 SANSHKNSNTATKSHHHL------PLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK 70
S H NSN+ KS L LLQ+ H+ Q +HAQ+I+ + + + +
Sbjct: 20 SPKPHPNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIR---NGHSQDPFMVFE 76
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
L+ S I YA +F NP+ + + +I G+ +G IQLY++M+ + PD
Sbjct: 77 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPD 136
Query: 131 SFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
++ +LKACG LR+ + VHS +K F+S R++ Y G++ A+ +F
Sbjct: 137 NYLMASILKACGSQLALREGREVHSRALK-LGFSSNRLVRLRIMELYGKCGELGDARRVF 195
Query: 188 DQMTE----KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
++M E K+ V WTAMI+G V+ + ++ FR M+ V NE T+V VLSAC+ L
Sbjct: 196 EEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQL 255
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
GA E+G+WVH ++ K I LN +G AL +MY++CG I+EA VF + +++V T+N++I
Sbjct: 256 GALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMI 315
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
GL+++G +A+++F M ++P +VT + VL ACSH GL++ G EIF++M RDY+V
Sbjct: 316 SGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRV 375
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
EP ++HYGC+VDLL R L+EAY++IR M M P+ ++ G+LL+AC N+EL E
Sbjct: 376 EPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHK---NLELGEQ 432
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVH 483
+ L + G YVL+S++YA+ +W +A ++R MKE + K PGCS IE+N+ +H
Sbjct: 433 VAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIH 492
Query: 484 EFMVGDGRHPCSEEIY 499
EF++GD RHP E IY
Sbjct: 493 EFLLGDLRHPQKERIY 508
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/534 (36%), Positives = 316/534 (59%), Gaps = 58/534 (10%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKL-IESLVNSSQIAYAHLVFNQII 92
P + C + Q+HA IK+ T++ ++ + S ++ + YAH +FNQ+
Sbjct: 27 FPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 86
Query: 93 NPSTFAFNTVIRGYAEAGLGHR--GIQLYTQMIGNG-LDPDSFTYPILLKAC---GDLRQ 146
+ F++NT+IRG++E+ I L+ +M+ + ++P+ FT+P +LKAC G +++
Sbjct: 87 QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 147 VKGVHSLVVK----SKDFNSVIHSLTRL-----------ITFYCN--------------- 176
K +H L +K +F V+ +L R+ + FY N
Sbjct: 147 GKQIHGLALKYGFGGDEF--VMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204
Query: 177 ----------------FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
GD K+A++LFD+M +++VV+W MI+G+ +++ +++FR+
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M+ + N +TLVSVL A + LG+ ELG+W+H + + I ++D LG+AL DMY+KCG
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
IE+A+ VF+ + +NV TW+++I G AIHG +A+ F +M+ +G++P DV I +LTA
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
CSH GL+E+G+ F M +EP ++HYGC+VDLL R+ LLDEA E I NMP++P+ V
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 401 LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRR 460
+W +LL AC NVE+ + L+ + P + G YV +SN+YA++ W + +MR
Sbjct: 445 IWKALLGACRMQ---GNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRL 501
Query: 461 LMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
MKE++I K+PGCS+I+I+ V+HEF+V D HP ++EI SML ++ LR Y
Sbjct: 502 RMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY 555
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 194/517 (37%), Positives = 316/517 (61%), Gaps = 19/517 (3%)
Query: 14 FTNSANSHKNSNTATKSHHHLPLLQKCTHLVQF--------KQVHAQIIKASFDNRTISD 65
FT+ + +S+ H +L+KC LVQ KQ+HA I+ +
Sbjct: 11 FTSRTITSNSSSQNFLDCHLSFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDF 70
Query: 66 TQLAKLIESLVN-SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM-I 123
+ LI +LV+ S+ +++A +FNQI P+ F +NT+IRG+AE+ ++L++QM
Sbjct: 71 NK--HLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHA 128
Query: 124 GNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
+ + PD+ T+P L KA L V +G+HS+VV++ F+S+ L+ Y FG
Sbjct: 129 ASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRN-GFDSLRFVQNSLVHMYSVFGFA 187
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
+SA +F+ M+ ++ V W ++ING E + L+R+M GVE + T+VS+LSAC
Sbjct: 188 ESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSAC 247
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
LGA LG+ VH ++ K ++ N AL D+Y+KCG +A +VF + E++V +W
Sbjct: 248 VELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWT 307
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
S+I GLA++G G EA+K+F +++ G+KP ++T + VL ACSH G++++G F M+ +
Sbjct: 308 SLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEE 367
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
Y + P ++H+GC+VDLLCRA + +AY+ IRNMP+ PNAV+W +LL AC ++EL
Sbjct: 368 YGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIH---GHLEL 424
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
E+A + +LE + G++VL+SN+YA++ +W D +R++M + + K PG S++E+ +
Sbjct: 425 GEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKN 484
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
V+EF++GD HP SEE Y+ML + L+ E Y R
Sbjct: 485 RVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPR 521
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 201/526 (38%), Positives = 305/526 (57%), Gaps = 43/526 (8%)
Query: 25 NTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSS----- 79
NT H L LLQ C+ K +H +++ + ++L L + +S+
Sbjct: 7 NTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPT 66
Query: 80 -QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
+ YA+ +F+QI NP+ F FN +IR ++ + YTQM+ + + PD+ T+P L+
Sbjct: 67 NLLGYAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI 126
Query: 139 KACGDLRQV---KGVHSLVVK---SKDF---NSVIH------------------------ 165
KA ++ V + HS +V+ D NS++H
Sbjct: 127 KASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVV 186
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
S T ++ YC G V+ A+ +FD+M +N+ TW+ MING+ K + + IDLF M+ G
Sbjct: 187 SWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREG 246
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
V NE +VSV+S+CA+LGA E G+ HE+V K+ + +N LG AL DMY +CG IE+A+
Sbjct: 247 VVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAI 306
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
RVF+ + +K+ +W+SII GLA+HG +A+ F QM G P D+TL AVL+ACSH G
Sbjct: 307 RVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGG 366
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
L++KG EI+ NM+RDY +EP ++HYGC+VD+L RA L EA I MP++PNA + G+L
Sbjct: 367 LVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGAL 426
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L AC N E+AE LI+++P + G YVL+SNIYA QW+ +R +MKE+
Sbjct: 427 LGACKIYK---NTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEK 483
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDG-RHPCSEEIYSMLEYVAISLR 510
+ K PG S+IEI+ +++F +GD +HP +I + E + +R
Sbjct: 484 LVKKPPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIR 529
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 197/507 (38%), Positives = 294/507 (57%), Gaps = 45/507 (8%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL--VNSSQIAYAHLVFNQIIN 93
+L CTH+ Q KQVHA I + + LAKL+ +L ++ Y LVF Q+
Sbjct: 45 VLHGCTHINQVKQVHAHIFRKGLEQCCFV---LAKLLRTLTKLDVPMDPYPRLVFQQVEY 101
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGV 150
P+ F + +IRGYA G + LY M G+ P SFT+ LLKAC D+ + V
Sbjct: 102 PNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQV 161
Query: 151 HSLVVKSKDFNSVIH-------------------------------SLTRLITFYCNFGD 179
H+ + F S ++ S T LI Y G+
Sbjct: 162 HTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGN 221
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
+++A LFD + K++V WTAM+ G+ + RE +++F +M+ +GV+ +E+TLV V+SA
Sbjct: 222 MEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISA 281
Query: 240 CANLGASELGKWVHEFVNKNCI--ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
CA LGA++ WV + ++ N +G+AL DMYAKCG +E+A +VF+ + E+NV
Sbjct: 282 CAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVY 341
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
+++S+I G A+HG A+++F +M + IKP+ VT I VLTACSHAG++E+G+++F M
Sbjct: 342 SYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMM 401
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ V P+ HY C+VDLL RA L+EA +++ MPM P+ +WG+LL AC N
Sbjct: 402 EECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIH---GN 458
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
++A+IA L +LEP GNY+L+SNIYA+ +WDD K+R+LM+ + + KNPGCS +E
Sbjct: 459 PDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVE 518
Query: 478 -INDVVHEFMVGDGRHPCSEEIYSMLE 503
++HEF GD HP S EI LE
Sbjct: 519 GKKGIIHEFFAGDMSHPKSREIKQALE 545
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 190/512 (37%), Positives = 295/512 (57%), Gaps = 39/512 (7%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKAS---------------------------FDNRTISD 65
LL+ C F +Q+HAQ++K FD + D
Sbjct: 89 LLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRD 148
Query: 66 T-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
LI + + A VF+ I ++N +I GY E ++L+ +M+
Sbjct: 149 VVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMR 208
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
+ PD T +L AC G + + +H+LV F S + + I Y GDV+
Sbjct: 209 TNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVE 268
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
A LF+ ++ K+VV+W +I G+ Y+E + LF++M SG N++T++SVL ACA
Sbjct: 269 IASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 328
Query: 242 NLGASELGKWVHEFVNKNC--IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
+LGA ++G+W+H +++K + L +L DMYAKCG IE A +VF ++ K++ +W
Sbjct: 329 HLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSW 388
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N++I G A+HG A +F +M+ +GI+PDD+TL+ +L+ACSH+GL++ G+ IF ++ +
Sbjct: 389 NAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQ 448
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
DY + P ++HYGC++DLL A L EA E+I MPMEP+ V+W SLL AC N+E
Sbjct: 449 DYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMH---GNLE 505
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
LAE ++L+++EP N G+YVL+SNIYA +W+D ++R ++ + + K PGCS IEI+
Sbjct: 506 LAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEID 565
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
VVHEF++GD HP S EIY MLE + + L E
Sbjct: 566 SVVHEFIIGDKLHPQSREIYRMLEEMDVLLEE 597
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 214/400 (53%), Gaps = 42/400 (10%)
Query: 49 VHAQIIKASFDNRTISDTQLAKLIESLVNSSQ---IAYAHLVFNQIINPSTFAFNTVIRG 105
HAQ++K N ++ L+KL+E V S + YA VF P+ +NT++RG
Sbjct: 1 THAQMVKTGLHN---TNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRG 57
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVK------ 156
A + +++Y +M+ G P+++T+P LLK+C + + +H+ V+K
Sbjct: 58 LASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELD 117
Query: 157 --------------------SKDFNSV----IHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
K F+ + S T LIT Y + GDV+SA+ +FD +TE
Sbjct: 118 RYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITE 177
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
++VV+W AMI G+V+ Y E ++LF++M + V +E TLVSVLSACA G+ ELG+ +
Sbjct: 178 RDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREI 237
Query: 253 HEFVNKNCIILND-KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
H V+ + + K+ A +Y+KCG +E A +F+ + K+V +WN++IGG
Sbjct: 238 HTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNL 297
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHY 370
+EA+ +F +M SG P+DVT+++VL AC+H G I+ G+ I Y +R V
Sbjct: 298 YKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALR 357
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
L+D+ + ++ A++V +M M + W +++ A
Sbjct: 358 TSLIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNAMIFGFA 396
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 190/515 (36%), Positives = 306/515 (59%), Gaps = 40/515 (7%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LL KC +++ K++HA I + ++ +L NS I Y++ VF+QI +
Sbjct: 18 LSLLDKCKSMLELKKLHAIGISYGLSHEYSFIFKILSF-SALSNSGDIDYSYRVFSQISS 76
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---V 150
P+ F++N +IRGY+ + + ++ +M+ +G+ PD TYP L+KA L + K V
Sbjct: 77 PTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQKSGVSV 136
Query: 151 HSLVVK----SKDF--NSVIH------------------------SLTRLITFYCNFGDV 180
H+ ++K S F NS+IH S ++ Y G++
Sbjct: 137 HAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAKCGEM 196
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
AQ +F+ M E++V +W++ I+G+VK YRE + +F KMR G + NE+T+VSVLSAC
Sbjct: 197 AMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSAC 256
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV--LEKNVCT 298
A+LGA + G+ +H+++ N + + L +L DMYAKCG IEEAL VF+ + + +V
Sbjct: 257 AHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFI 316
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
WN++IGGLA HG EE++K+F +MQM+GI+ D++T + +L AC+H GL+++ F ++
Sbjct: 317 WNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFFESLV 376
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
+ + P +HY C+VD+L RA L AY+ I +P+EP A + G++ + C + N
Sbjct: 377 KR-GMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCI---NHRNF 432
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
+LAE +LI+L+P NDG Y+ +SN+YA +WDD+ MR M+ R + K+PG S +EI
Sbjct: 433 DLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFSFVEI 492
Query: 479 NDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREEC 513
+++ H F+ D HP S+E YSML +V ++ C
Sbjct: 493 SEIHHRFIAHDKTHPDSDETYSMLHFVVCQMKHGC 527
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 194/508 (38%), Positives = 293/508 (57%), Gaps = 42/508 (8%)
Query: 32 HHLP---LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF 88
HH P LL T + KQ+HA ++K N +S L+++ +S +YA L+F
Sbjct: 14 HHRPSTHLLHNFTSPFELKQLHAHLLKT---NSPLSSLPLSRVASVCAFNSSFSYAKLIF 70
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLR 145
+ +NT +R +AE I L+ ++ + PD +T +LKAC D+R
Sbjct: 71 QLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVR 130
Query: 146 QVKGVHSLV----VKSKDF--NSVIH------------------------SLTRLITFYC 175
K VH V ++S F N ++H + +I
Sbjct: 131 NGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLV 190
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
GD + A LF +M E+NV +WT+MI G+ + +E IDLF +M D+G+ NE+T+V+
Sbjct: 191 KMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVA 250
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
VL ACA++G LG+ +H+F N++ N ++ L DMY KCG +E+A R+F + E+
Sbjct: 251 VLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERT 310
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
V +W+++I GLA HG E+A+ +F +M +G+KP+ VT I +L ACSH G++EKG++ F
Sbjct: 311 VVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFA 370
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+M RDY + P ++HYGC+VDL RA LL EA+E I NMP+ PN V+WG+LL C
Sbjct: 371 SMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHK-- 428
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
N++LAE A L KL+P NDG YV++SNIYA +W+D ++R+LM++R + K PG S
Sbjct: 429 -NIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSS 487
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLE 503
I + VV+ F+ GD HP +EEI+ E
Sbjct: 488 IMVEGVVYNFVAGDDTHPQTEEIFQTWE 515
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 193/517 (37%), Positives = 315/517 (60%), Gaps = 19/517 (3%)
Query: 14 FTNSANSHKNSNTATKSHHHLPLLQKCTHLVQF--------KQVHAQIIKASFDNRTISD 65
FT+ + +S+ H +L+KC LVQ KQ+HA I+ +
Sbjct: 11 FTSRTITSNSSSQNFLDCHLSFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDF 70
Query: 66 TQLAKLIESLVN-SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM-I 123
+ LI +LV+ S+ +++A +FNQI P+ F +NT+IRG+AE+ ++L++QM
Sbjct: 71 NK--HLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHA 128
Query: 124 GNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
+ + PD+ T+P L KA L V +G+HS+VV++ F+S+ L+ Y G +
Sbjct: 129 ASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRN-GFDSLRFVQNSLVHMYSVLGSL 187
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
SA +F+ M+ ++ V W ++ING E + L+R+M GVE + T+VS+LSAC
Sbjct: 188 XSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSAC 247
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
LGA LG+ VH ++ K ++ N AL D+Y+KCG +A +VF + E++V +W
Sbjct: 248 VELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWT 307
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
S+I GLA++G G EA+K+F +++ G+KP ++T + VL ACSH G++++G F M+ +
Sbjct: 308 SLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEE 367
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
Y + P ++H+GC+VDLLCRA + +AY+ IRNMP+ PNAV+W +LL AC ++EL
Sbjct: 368 YGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIH---GHLEL 424
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
E+A + +LE + G++VL+SN+YA++ +W D +R++M + + K PG S++E+ +
Sbjct: 425 GEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKN 484
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
V+EF++GD HP SEE Y+ML + L+ E Y R
Sbjct: 485 RVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPR 521
>gi|296087773|emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 191/489 (39%), Positives = 306/489 (62%), Gaps = 24/489 (4%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQI 91
+ L Q C+++ QFK +HA I + +++ ++KLI +L NS ++YA L+F+QI
Sbjct: 8 ISLAQSCSNMRQFKAIHALFI---VNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQI 64
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKACGD---LRQV 147
NP+ FA+NT+IR Y+ + + + M+ + + PD T+P ++ AC + +
Sbjct: 65 QNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLG 124
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFY---CNFGDVKSAQLLFDQMTEKNVVTWTAMING 204
K +H+ V+K+ +S H T L+ FY C GD A+ LFD++ +VV W ++NG
Sbjct: 125 KQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGD---ARKLFDEIPNLDVVQWNVLLNG 181
Query: 205 HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
+V++ E ++ FR M SGVE +E L + L CA LGA + GKW+HE+V K +
Sbjct: 182 YVRRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEA 241
Query: 265 DK-LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
D +G AL DMYAKCG I+ ++ VF+ + ++NV +W+++IGG A+HG +A++ +MQ
Sbjct: 242 DVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQ 301
Query: 324 M-SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
+ G++PD V L+ V+ AC+HAGL E+G+ + NM Y + P +HY C+VDLLCRA
Sbjct: 302 VEDGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQ 361
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN----DGN 438
LDEA ++IR MPM+P A +WG+LL+ C + + NV+LAE+A L+ + + DG
Sbjct: 362 LDEALKLIRRMPMKPRAAVWGALLSGCRTHN---NVDLAELAARELLMVGNGDGTEEDGA 418
Query: 439 YVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
YV +SNIY A + +DA ++RR++ ++ I PGCS+IE+ V++F+ GD HPC +I
Sbjct: 419 YVQLSNIYLAAQKCEDACRIRRMIGDKRIKTKPGCSLIEVEGEVNQFVSGDISHPCLAQI 478
Query: 499 YSMLEYVAI 507
+ ML+ V++
Sbjct: 479 HEMLDLVSL 487
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/503 (36%), Positives = 299/503 (59%), Gaps = 37/503 (7%)
Query: 47 KQVHAQIIKASF---------------------DNRTISDTQ-------LAKLIESLVNS 78
KQ+HAQI+K D + DT +I +
Sbjct: 98 KQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASR 157
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
+ A +F++I ++N +I GYAE G ++L+ +M+ + PD T +L
Sbjct: 158 GNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVL 217
Query: 139 KAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
C G++ + +HS + + F S + + LI Y G+++ A LF+ + K+V
Sbjct: 218 STCTHSGNVELGRQIHSWI-DNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDV 276
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
++W +I G+ +++E + +F++M G N++T++S+L ACA+LGA ++G+W+H +
Sbjct: 277 ISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVY 336
Query: 256 VNKNC--IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
++K II N L +L DMYAKCG IE A +VF +L K++ + N++I G A+HG +
Sbjct: 337 IDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRAD 396
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
A + +M+ GI+PDD+T + +L+ACSHAGL + G++IF +M DY++EP ++HYGC+
Sbjct: 397 AAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCM 456
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
+DLL R+ L EA E+I +M MEP+ V+WGSLL AC N+EL E+ ++L+K+EP
Sbjct: 457 IDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIH---KNLELGELIAQKLMKIEP 513
Query: 434 FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHP 493
N G+YVL+SNIYA A+WDD ++R L+ ++ + K PGCS IEI+ +VHEF++GD HP
Sbjct: 514 KNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHP 573
Query: 494 CSEEIYSMLEYVAISLREECYAA 516
++EIY MLE + L E + +
Sbjct: 574 QNKEIYKMLEEIDSLLAETGFVS 596
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 200/370 (54%), Gaps = 38/370 (10%)
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
+ YA VF I P+ ++NT+IRG+A + + LY MI GL P+S+T+P L K+
Sbjct: 28 LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87
Query: 141 CGDLR---QVKGVHSLVVK--------------------------SKDFNSVIH----SL 167
C + + K +H+ ++K K F++ H S
Sbjct: 88 CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
T +IT Y + G++ AQ +FD++ K+VV+W AMI+G+ + Y+E ++LF +M V+
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+E T+ +VLS C + G ELG+ +H +++ + N KL AL D+Y+KCG +E A +
Sbjct: 208 PDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGL 267
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
F+ + K+V +WN++IGG A +EA+ +F +M G P+DVT++++L AC+H G I
Sbjct: 268 FEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAI 327
Query: 348 EKGKEIFYNMRRDYK-VEPNVKHYGCLVDLLCRARLLDEA---YEVIRNMPMEP-NAVLW 402
+ G+ I + + K + N L+D+ + ++ A ++ I N + NA+++
Sbjct: 328 DIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIF 387
Query: 403 GSLLTACASA 412
G + A A
Sbjct: 388 GFAMHGRADA 397
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 191/520 (36%), Positives = 303/520 (58%), Gaps = 43/520 (8%)
Query: 32 HHLPL--LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLV 87
H LPL L C+ + + KQ H+QII+ + + + ++I+ ++ S + YA V
Sbjct: 20 HKLPLYGLDSCSTMAELKQYHSQIIRLGL---SADNDAMGRVIKFCAISKSGDLNYALEV 76
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DL 144
F++I +P + +NT+ RGY L I +Y++M+ + P+ FTYP L++AC +
Sbjct: 77 FDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAI 136
Query: 145 RQVKGVHSLVVK------SKDFNSVIH------------------------SLTRLITFY 174
+ K +H+ V+K N++IH S T LIT Y
Sbjct: 137 EEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGY 196
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
+G V A+ +F+ M E+N V+W AMI +V+ E LF +MR V +++
Sbjct: 197 SQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAA 256
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
S+LSAC LGA E GKW+H ++ K+ I L+ KL + DMY KCG +E+A VF + +K
Sbjct: 257 SMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQK 316
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
+ +WN +IGGLA+HG GE A+++F +M+ + PD +T + VL+AC+H+GL+E+GK F
Sbjct: 317 GISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYF 376
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
M ++P ++H+GC+VDLL RA LL+EA ++I MP+ P+A + G+L+ AC
Sbjct: 377 QYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIH-- 434
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
N EL E +++I+LEP N G YVL++N+YA+ +W+D K+R+LM +R + K PG S
Sbjct: 435 -GNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFS 493
Query: 475 VIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+IE V EF+ G HP ++EIY+ L+ + ++R Y
Sbjct: 494 MIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGY 533
>gi|225452668|ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/486 (38%), Positives = 304/486 (62%), Gaps = 18/486 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQI 91
+ L Q C+++ QFK +HA I + +++ ++KLI +L NS ++YA L+F+QI
Sbjct: 8 ISLAQSCSNMRQFKAIHALFI---VNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQI 64
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKACGD---LRQV 147
NP+ FA+NT+IR Y+ + + + M+ + + PD T+P ++ AC + +
Sbjct: 65 QNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLG 124
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
K +H+ V+K+ +S H T L+ FY + A+ LFD++ +VV W ++NG+V+
Sbjct: 125 KQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVR 184
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK- 266
+ E ++ FR M SGVE +E L + L CA LGA + GKW+HE+V K + D
Sbjct: 185 RGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVF 244
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS- 325
+G AL DMYAKCG I+ ++ VF+ + ++NV +W+++IGG A+HG +A++ +MQ+
Sbjct: 245 IGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVED 304
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G++PD V L+ V+ AC+HAGL E+G+ + NM Y + P +HY C+VDLLCRA LDE
Sbjct: 305 GLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDE 364
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN----DGNYVL 441
A ++IR MPM+P A +WG+LL+ C + + NV+LAE+A L+ + + DG YV
Sbjct: 365 ALKLIRRMPMKPRAAVWGALLSGCRTHN---NVDLAELAARELLMVGNGDGTEEDGAYVQ 421
Query: 442 MSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSM 501
+SNIY A + +DA ++RR++ ++ I PGCS+IE+ V++F+ GD HPC +I+ M
Sbjct: 422 LSNIYLAAQKCEDACRIRRMIGDKRIKTKPGCSLIEVEGEVNQFVSGDISHPCLAQIHEM 481
Query: 502 LEYVAI 507
L+ V++
Sbjct: 482 LDLVSL 487
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 192/501 (38%), Positives = 299/501 (59%), Gaps = 22/501 (4%)
Query: 29 KSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLI--ESLVNSSQIAYAHL 86
+ H LP L +CT L Q+HA +K+ T+L L + +Q++YA
Sbjct: 30 QQHPLLPYLPQCTTLRALAQLHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQ 89
Query: 87 VFNQIINPSTFA-FNTVIRGYAE--AGLGHR-----GIQLYTQMIGNGLDPDSFTYPILL 138
VF++I P +NT++RGYA A G R +++ +M+ G+ PD++T+ LL
Sbjct: 90 VFDRIPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLL 149
Query: 139 KACGDLR---QVKGVHSLVVKSKDFNSVIHS--LTRLITFYCNFGDVKSAQLLFDQMTEK 193
KAC R + + H + VK + H L LI Y GD ++A+ +F ++ +
Sbjct: 150 KACAAARAGEEGRQAHGVAVK---VGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGE 206
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
VV++ AMI V+ E + LFR+M+ G+++ +TL+SVLSACA LGA ELG+W+H
Sbjct: 207 CVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIH 266
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
E+V K + K+ AL DMY KCG +E+A+ VF+ + ++ W+ +I A H G
Sbjct: 267 EYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGR 326
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
EA+ +F +M+ GIKPDDVT + VL ACSH+GL+ +G + F +M R++ + P +KHYGC+
Sbjct: 327 EAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSM-REFGLVPGIKHYGCV 385
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
DLL R+ LD AYE I +P++P A+LW +LL+AC S D +L + ER+++L+
Sbjct: 386 ADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDA---DLGKQVFERILELDD 442
Query: 434 FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHP 493
+ G+YV+ SN+ A +W++ ++R+LM E+ +VK PGCS IE+++ VHEF GDGRHP
Sbjct: 443 SHGGDYVIFSNLCANTGRWEEMNRVRKLMNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHP 502
Query: 494 CSEEIYSMLEYVAISLREECY 514
S + M++ V L+ Y
Sbjct: 503 KSLDARRMVDGVIEQLKLAGY 523
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 177/507 (34%), Positives = 303/507 (59%), Gaps = 40/507 (7%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
++ +P LQ+ ++K+++A II + T++ + + + YA +FNQ
Sbjct: 11 NYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKI---EDMDYATRLFNQ 67
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD-PDSFTYPILLKACGDL----- 144
+ NP+ F +N++IR Y L I++Y Q++ + PD FT+P + K+C L
Sbjct: 68 VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 127
Query: 145 -RQVKG-----------------------VHSLVVKSKDFNSV----IHSLTRLITFYCN 176
+QV G LV K F+ + + S L++ Y
Sbjct: 128 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 187
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
G +K A+ LF M +K +V+WTAMI+G+ Y E +D FR+M+ +G+E +E++L+SV
Sbjct: 188 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 247
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
L +CA LG+ ELGKW+H + + + + AL +MY+KCG I +A+++F + K+V
Sbjct: 248 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 307
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
+W+++I G A HG A++ F +MQ + +KP+ +T + +L+ACSH G+ ++G F
Sbjct: 308 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDM 367
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
MR+DY++EP ++HYGCL+D+L RA L+ A E+ + MPM+P++ +WGSLL++C +
Sbjct: 368 MRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTP---G 424
Query: 417 NVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
N+++A +AM+ L++LEP + GNYVL++NIYA +W+D ++R++++ N+ K PG S+I
Sbjct: 425 NLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 484
Query: 477 EINDVVHEFMVGDGRHPCSEEIYSMLE 503
E+N++V EF+ GD P EI +L+
Sbjct: 485 EVNNIVQEFVSGDNSKPFWTEISIVLQ 511
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 196/486 (40%), Positives = 279/486 (57%), Gaps = 45/486 (9%)
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL 127
L ++ L+ Q A LV + + S N +IR A + H + LY ++ G
Sbjct: 146 LKTRLQELIGEDQAA---LVTSGWLRRSADLHNALIRALAGSARPHLALPLYAHLLRAGH 202
Query: 128 DPDSFTYPILLKACGDLRQVKG-------VHSLVVKS--KDFNSVIHSLTR--------- 169
P T P LLK+ V G VH+ VK F V ++L R
Sbjct: 203 HPTPHTLPSLLKSLALSPAVPGARGLALAVHAHAVKLGLAGFLLVSNALIRVHAGILGRL 262
Query: 170 --------------------LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
LIT Y G V A+ LFD+M +N V+W+AM+NG+V+
Sbjct: 263 SDALVLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAG 322
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ RE + LF +M+ GV ++ LV VL+ACA LG E GKWVH ++ N I + LG
Sbjct: 323 DGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGT 382
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG ++ A+ VFK++ EKNV W ++I GLA+HG G EA+++F QM+ G+KP
Sbjct: 383 ALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKP 442
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
DD+ I L AC+H GL++KG+E+F +M R Y ++P ++HYGC+VDLL R LL+EA E+
Sbjct: 443 DDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREM 502
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
+ MPM+P+A++WG+L+ C NVELAE ++ I+LEP G YVL+ NIYAA
Sbjct: 503 VEKMPMKPDALIWGALMAGCRFHK---NVELAEYVVKHWIELEPDKSGAYVLLGNIYAAS 559
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+ A ++R LM+E+ + K PGCS +EI V+H+F+VGD HP EEI S + + +
Sbjct: 560 GRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKWDEIDSRI 619
Query: 510 R-EECY 514
R EE Y
Sbjct: 620 RLEEGY 625
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 188/500 (37%), Positives = 288/500 (57%), Gaps = 40/500 (8%)
Query: 36 LLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQL------------------------ 68
LL+ C L++ +Q+H ++K +D +T L
Sbjct: 71 LLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRH 130
Query: 69 ----AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
LI + I A +F++I ++N +I GY E ++LY M+
Sbjct: 131 VVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMK 190
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
+ PD T ++ AC G + + +HS + + F S I + LI Y G+V+
Sbjct: 191 TNVKPDESTMVTVVSACAQSGSIELGRQLHSWI-EDHGFGSNIKIVNVLIDLYSKCGEVE 249
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
+A LF + +K+V++W +I GH Y+E + LF++M SG N++T++SVL ACA
Sbjct: 250 TACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 309
Query: 242 NLGASELGKWVHEFVNKNC--IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
+LGA ++G+W+H ++NK + L +L DMYAKCG IE A +VF +L +++ +W
Sbjct: 310 HLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSW 369
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N++I G A+HG A +F +M+ +GI PDD+T + +L+ACSH+G+++ G+ IF +M +
Sbjct: 370 NAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQ 429
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
DYK+ P ++HYGC++DLL L EA E+IR MPMEP+ V+W SLL AC + NVE
Sbjct: 430 DYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHN---NVE 486
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
L E + LIK+EP N G+YVL+SNIYA +WD K+R L+ ++ I K PGCS IEI+
Sbjct: 487 LGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEID 546
Query: 480 DVVHEFMVGDGRHPCSEEIY 499
VVHEF++GD HP + EIY
Sbjct: 547 SVVHEFIIGDKFHPRNREIY 566
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 203/370 (54%), Gaps = 38/370 (10%)
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
++YA +F I P+ +NT+ RG+A ++LY MI GL P+S+++P LLK+
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 141 CGD---LRQVKGVHSLVVK--------------------------SKDFNSVIH----SL 167
C L + + +H V+K K F+ H S
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
T LIT Y + G + +A+ LFD+++ K+VV+W AMI+G+V+ N++E ++L++ M + V+
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+E T+V+V+SACA G+ ELG+ +H ++ + N K+ L D+Y+KCG +E A +
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
F+ + +K+V +WN++IGG +EA+ +F +M SG P+DVT+++VL AC+H G I
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314
Query: 348 EKGKEIFYNMRRDYKVEPNVKH-YGCLVDLLCRARLLDEAYEVIRNMPMEP----NAVLW 402
+ G+ I + + K N L+D+ + ++ A +V +M NA+++
Sbjct: 315 DIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIF 374
Query: 403 GSLLTACASA 412
G + A+A
Sbjct: 375 GFAMHGKANA 384
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 121/262 (46%), Gaps = 33/262 (12%)
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
+F + A +F+ + E N++ W M GH + + L+ M G+ N +
Sbjct: 11 HFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPF 70
Query: 236 VLSACANLGASELGKWVHE-----------FVNKNCIILNDKLG---------------- 268
+L +CA A G+ +H +VN + I + + G
Sbjct: 71 LLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRH 130
Query: 269 ----AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
AL YA GYI A ++F + K+V +WN++I G +EA++++ M
Sbjct: 131 VVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMK 190
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
+ +KPD+ T++ V++AC+ +G IE G+++ ++ D+ N+K L+DL + ++
Sbjct: 191 TNVKPDESTMVTVVSACAQSGSIELGRQL-HSWIEDHGFGSNIKIVNVLIDLYSKCGEVE 249
Query: 385 EAYEVIRNMPMEPNAVLWGSLL 406
A + + + + + + W +L+
Sbjct: 250 TACGLFQGLA-KKDVISWNTLI 270
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 8/176 (4%)
Query: 34 LPLLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
L +L C HL + +H I K T + + L LI+ I A VF+
Sbjct: 302 LSVLPACAHLGAIDIGRWIHVYINK-RLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDS 360
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK-G 149
++ S ++N +I G+A G + L+++M NG+DPD T+ LL AC + G
Sbjct: 361 MLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLG 420
Query: 150 VHSLVVKSKDFNSV--IHSLTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMI 202
H S+D+ + +I + G K A+ + M E + V W +++
Sbjct: 421 RHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLL 476
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 181/492 (36%), Positives = 296/492 (60%), Gaps = 39/492 (7%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L + T + + Q HA I+K+ + T + ++L + + ++ I YAH +F++I N
Sbjct: 11 LSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPN 70
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGV 150
P+++ +NT+IR YA + + ++ QM+ + PD +T+ LK+CG V + +
Sbjct: 71 PNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQI 130
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE------------------ 192
H V+K+ + + T LI Y + G ++ A+ L D+M E
Sbjct: 131 HGHVLKTGLGDDLFIQNT-LIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGL 189
Query: 193 --------------KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
KNVV+W AMI G+ + E + LF M+ +GV+ + TLVSVLS
Sbjct: 190 MELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLS 249
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
ACA++GA G+WVH +++KN I ++ + AL DMY+KCG IE+AL VF L K++ T
Sbjct: 250 ACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDIST 309
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
WNSII GL+ HG G+ A+++F +M + G KP++VT + VL+ACS AGL+++G+E+F M
Sbjct: 310 WNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMV 369
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
+ ++P ++HYGC+VDLL R LL+EA E+++ MP + +V+W SLL AC + NV
Sbjct: 370 HVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGAC---RNHGNV 426
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
ELAE ++L++L P ++V +SN+YA+ +W D ++R+ M+ + + K+PGCS+IE+
Sbjct: 427 ELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEV 486
Query: 479 NDVVHEFMVGDG 490
+ V+EF+ G+G
Sbjct: 487 DGTVYEFLAGEG 498
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 197/523 (37%), Positives = 295/523 (56%), Gaps = 42/523 (8%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
H + LL CT L + KQ+HAQ++ N Q I +L N++ + YA+ + N
Sbjct: 10 HPTISLLNSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVATI-ALHNTTNLDYANKLLNH 68
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI---GNGLDPDSFTYPILLKACGDLR-Q 146
NP+ F N++IR Y+++ + Y ++ N L PD++T+ L++ C L+
Sbjct: 69 NNNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAH 128
Query: 147 VKG--VHSLVVKSKDFNSVIHSLTRLITFYCNFG-------------------------- 178
V G VH V+K F H T L+ Y G
Sbjct: 129 VTGLCVHGAVIK-HGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNA 187
Query: 179 -----DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
D+ A+ +FD+M E++ VTW AMI G+ + RE +D+F M+ GV++NE+++
Sbjct: 188 CAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSM 247
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
V VLSAC +L + G+WVH +V + + + LG AL DMYAKCG ++ A++VF + E
Sbjct: 248 VLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKE 307
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
+NV TW+S IGGLA++G GEE++ +F M+ G++P+ +T I+VL CS GL+E+G++
Sbjct: 308 RNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKH 367
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F +MR Y + P ++HYG +VD+ RA L EA I +MPM P+ W +LL AC
Sbjct: 368 FDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMY- 426
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
N EL EIA ++++LE NDG YVL+SNIYA W+ +R+ MK + + K PGC
Sbjct: 427 --KNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGC 484
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
SVIE++ VHEF+VGD HP +EI LE ++ LR Y A
Sbjct: 485 SVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVA 527
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 183/511 (35%), Positives = 307/511 (60%), Gaps = 56/511 (10%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
+ + K+ HA +IK + S+ + K+I+ + + YA +F ++I+P+ + +N +
Sbjct: 1 MAELKKNHALVIKYALSQ---SNFLVTKMIDVCDRNEDMDYASFLFKEVIDPNAYLYNAM 57
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLD---------PDSFTYPILLKACGDLRQVKGVHSL 153
IR + I Y QM+ + PD FT+P ++KAC L G+H+L
Sbjct: 58 IRACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARL----GLHNL 113
Query: 154 --VVKSKDF-----------NSVIHSLTR------------------------LITFYCN 176
V ++ F N++I T+ +I+ +
Sbjct: 114 GKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVR 173
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
G ++ A+ LFD+M + +V+WTA+I+G+ + +Y + +D+FR+M+ +G+E +E +++SV
Sbjct: 174 LGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISV 233
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
L ACA LGA E GKW+H F +N ++ + AL +MY KCG I++A ++F + ++V
Sbjct: 234 LPACAKLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDV 293
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
+W+++IGGLA HG EA+ +F +M+ + IKP+ +T + +L+AC+HAG E+G F
Sbjct: 294 ISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDT 353
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
M++D+ +EP ++HYG LVDLL RA L +A +++ MPM+P++ +WGSLL++C +
Sbjct: 354 MKKDFHIEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTH---C 410
Query: 417 NVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
N+E+A IAME L +LEP + GNYVL+SNIYA +WDD +MR+L++ + + K PGCS+I
Sbjct: 411 NIEVAVIAMEHLEELEPDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLI 470
Query: 477 EINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
E+N+V EF+ GD P S+EI+ +LE +A
Sbjct: 471 EVNNVAQEFVSGDDSKPYSKEIFWLLELLAF 501
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 186/490 (37%), Positives = 283/490 (57%), Gaps = 36/490 (7%)
Query: 59 DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQL 118
D + + L KL S + ++ Y+ +F + NPS F + +I G+A GL + +
Sbjct: 3 DKKPPAXVPLDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNF 62
Query: 119 YTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG 178
Y QM+ G++P++FT+ +LK C + K +HS VK F+S ++ T L+ Y G
Sbjct: 63 YAQMLTQGVEPNAFTFSSILKLC-PIEPGKALHSQAVKL-GFDSDLYVRTGLLDVYARGG 120
Query: 179 DVKSAQLLFDQMTEKNVVT-------------------------------WTAMINGHVK 207
DV SAQ LFD M EK++V+ W MI+G+ +
Sbjct: 121 DVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQ 180
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
E + LFR+M + + NE+T++SVLSAC LGA E G+WVH ++ N I N +
Sbjct: 181 NGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHV 240
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
G AL DMY+KCG +E+A VF + +K+V WNS+I G A+ G +EA+++F M G+
Sbjct: 241 GTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGL 300
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
P ++T I +L+AC H+G + +G +IF M+ +Y +EP ++HYGC+V+LL RA +++AY
Sbjct: 301 HPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAY 360
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
E+++NM +EP+ VLWG+LL AC + L E +E L+ N G Y+L+SNIYA
Sbjct: 361 ELVKNMNIEPDPVLWGTLLGACRLH---GKIALGEKIVELLVDQNLANSGTYILLSNIYA 417
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
A WD ++R +MK+ + K PGCS IE+N+ VHEF+ G HP +EIY MLE +
Sbjct: 418 AVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEING 477
Query: 508 SLREECYAAR 517
L+ Y +
Sbjct: 478 WLKSHGYTPQ 487
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 146/320 (45%), Gaps = 59/320 (18%)
Query: 47 KQVHAQIIKASFDN---------------------RTISDTQLAKLIESLV-------NS 78
K +H+Q +K FD+ + + DT K + SL
Sbjct: 91 KALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKH 150
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
++ A ++F+ + +N +I GY + G+ + + L+ +M+ P+ T +L
Sbjct: 151 GELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVL 210
Query: 139 KACGDLRQVKG---VHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
ACG L ++ VHS + + FN +H T L+ Y G ++ A+L+FD++ +K+
Sbjct: 211 SACGQLGALESGRWVHSYIENNGIQFN--VHVGTALVDMYSKCGSLEDARLVFDKIDDKD 268
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
VV W +MI G+ +E + LF+ M G+ +T + +LSAC + G WV E
Sbjct: 269 VVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSG------WVTE 322
Query: 255 ---FVNKNCIILNDKLG--------AALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSI 302
NK + D+ G + ++ + G++E+A + K + +E + W ++
Sbjct: 323 GWDIFNK----MKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTL 378
Query: 303 IGGLAIHG---CGEEAVKMF 319
+G +HG GE+ V++
Sbjct: 379 LGACRLHGKIALGEKIVELL 398
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 78/205 (38%), Gaps = 14/205 (6%)
Query: 6 VPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQF---KQVHAQIIKASFDNRT 62
+PN L F + N T L +L C L + VH+ I
Sbjct: 183 MPNEALVLFRRMLKAKAKPNEVTV----LSVLSACGQLGALESGRWVHSYIENNGIQFNV 238
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
T L++ + A LVF++I + A+N++I GYA G +QL+ M
Sbjct: 239 HVGT---ALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSM 295
Query: 123 IGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSV---IHSLTRLITFYCNFGD 179
GL P + T+ +L ACG V + K KD + I ++ G
Sbjct: 296 CRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGH 355
Query: 180 VKSAQLLFDQMT-EKNVVTWTAMIN 203
V+ A L M E + V W ++
Sbjct: 356 VEQAYELVKNMNIEPDPVLWGTLLG 380
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 196/521 (37%), Positives = 319/521 (61%), Gaps = 57/521 (10%)
Query: 40 CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAF 99
C + KQ+HAQ+IK + ++ +L + ++ + + YA +F + P+ F++
Sbjct: 21 CKTMQDLKQLHAQMIKTAQIRDPLAAAELLRF-SAVSDHRDLDYARKIFRSMHRPNCFSY 79
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKACGD---LRQVKGVHSLVV 155
NT+IR +E+ + ++ +M+ + ++P+ FT+P + KACG LR+ + VH L V
Sbjct: 80 NTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAV 139
Query: 156 K----SKDFNSVIHSLTRL----------------------------------------- 170
K S +F V+ ++ R+
Sbjct: 140 KFGLDSDEF--VVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWN 197
Query: 171 --ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV 228
I Y G+++ A+ LFD+M +++VV+W MI G+ + +++E +++FR+M+ + V
Sbjct: 198 VMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPP 257
Query: 229 NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
N +TLVSVL A + LGA ELGKWVH + +N I ++D LG+AL DMYAKCG IE+AL+VF
Sbjct: 258 NYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVF 317
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
+ + ++NV TW++II GLA+HG ++ + F M+ +G+ P DVT I +L+ACSHAGL+
Sbjct: 318 EGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVN 377
Query: 349 KGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+G+ F +M R +EP ++HYGC+VDLL RA LL+E+ E+I NMP++P+ V+W +LL A
Sbjct: 378 EGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGA 437
Query: 409 CASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIV 468
C NVE+ + E L++L P + G+YV +SNIYA+ W+ K+R +MKE ++
Sbjct: 438 CKMH---GNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVR 494
Query: 469 KNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
K+PGCS IE++ V+HEF+V D HP S++I+SML+ ++ +L
Sbjct: 495 KDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNL 535
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 194/512 (37%), Positives = 292/512 (57%), Gaps = 36/512 (7%)
Query: 40 CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAF 99
CT L KQ+HA I + + + T L + I +L + Y HL+F+Q+ +P+ F +
Sbjct: 21 CTTLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLY 80
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY-------------------PILLKA 140
+ +IR YA G H I+LYT M+ N + P SFT+ L
Sbjct: 81 SALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPSLGSQLHLHAFLFGF 140
Query: 141 CGDLRQVKGVHSLVVK-------SKDFNSVIH----SLTRLITFYCNFGDVKSAQLLFDQ 189
DL + + VK K F+ + H + T LI Y GD+ SA LF
Sbjct: 141 VNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVG 200
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
+ K++V WT+M+ G+ + ++ + FRKMR++GV +E+TLV +SACA LG S
Sbjct: 201 LPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYA 260
Query: 250 KWVHEFVNKNCIIL--NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
W+ E + N +G+AL DMY+KCG +EEA VFK + E NV +++S+I G A
Sbjct: 261 DWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFA 320
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
+HG A+K+F++M +GIKP+ VT + + TACSHAG++E+G+++F M+ Y V P
Sbjct: 321 VHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTA 380
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
HY C+ DLL RA L++A ++++ MPMEPN +WG+LL A + N ++AEIA
Sbjct: 381 DHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGA---SHIHGNPDVAEIASRS 437
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI-NDVVHEFM 486
L +LEP N GNY+L+S YA A+WDD ++R+LM+E+ + KNPGCS +E N ++HEF
Sbjct: 438 LFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFF 497
Query: 487 VGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
GD +HP EI L+ + L+ Y ++
Sbjct: 498 AGDVKHPEINEIKKALDDLLQRLKCTGYQPKL 529
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 42/311 (13%)
Query: 136 ILLKACGDLRQVKGVHSLVVKSKDFNS--VIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
I+ C L K +H+ + ++ S VI +L R IT + LLF Q+
Sbjct: 16 IIESHCTTLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSP 75
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
N ++A+I + + + I L+ M ++ V T ++ S N LG +H
Sbjct: 76 NPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKN---PSLGSQLH 132
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT--------------- 298
+ + +G + MY K G ++ A +VF + ++V T
Sbjct: 133 LHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMD 192
Query: 299 ----------------WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
W S++ G + + ++A++ F +M+ +G+ D++TL+ ++AC+
Sbjct: 193 SACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACA 252
Query: 343 H---AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
+G + +EI + R + NV L+D+ + ++EAY V + M E N
Sbjct: 253 QLGVSGYADWIREIAESSR--FGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMK-EMNV 309
Query: 400 VLWGSLLTACA 410
+ S++ A
Sbjct: 310 FSYSSMIVGFA 320
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 191/524 (36%), Positives = 304/524 (58%), Gaps = 45/524 (8%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLV--NSSQIAYAHLV 87
H + +++ CT L + KQ+H Q++ N ++D QL + + S+ N + + Y++ V
Sbjct: 10 HPTISMVEPCTTLRELKQIHTQLLI----NGLLNDPQLVGQFVASIALNNPNNLHYSNQV 65
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG--LDPDSFTYPILLKACGDL- 144
+ NP+ F FN++IR ++++ HR Y++++ + L PD++T+ L++ L
Sbjct: 66 LDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLL 125
Query: 145 --RQVKGVHSLVVK--------------------------SKDFNSVIHS----LTRLIT 172
VH VK + F+S+ T +++
Sbjct: 126 AHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVS 185
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
GDV A+ LFD+M+ K+ + W AMI+G+V+ RE + LF M+ GV+VNE++
Sbjct: 186 ACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVS 245
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
+VSVLSAC++LGA + G+W H ++ +N + + LG AL DMYAKCG + +A+ VF +
Sbjct: 246 MVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMK 305
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
EKNV TW+S IGGLA++G GE+ +++F M+ ++P+++T ++VL CS GL+E+G++
Sbjct: 306 EKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRK 365
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
F +M + Y +EP ++HYGC+VDL RA LDEA I +MP+ P+ WG+LL AC
Sbjct: 366 HFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIY 425
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
N+E+ E+A ++++LE N G YVL+SNIYA WD +R+ M + + K PG
Sbjct: 426 R---NMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPG 482
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
CSVIE+ VHEF VGD HP EI ML ++ L+ Y A
Sbjct: 483 CSVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVA 526
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 196/486 (40%), Positives = 279/486 (57%), Gaps = 45/486 (9%)
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL 127
L ++ L+ Q A LV + + S N +IR A + H + LY ++ G
Sbjct: 146 LKTRLQELIGEDQAA---LVTSGWLRRSADLHNALIRALAGSARPHLALPLYAHLLRAGH 202
Query: 128 DPDSFTYPILLKACGDLRQVKG-------VHSLVVKS--KDFNSVIHSLTR--------- 169
P T P LLK+ V G VH+ VK F V ++L R
Sbjct: 203 HPTPHTLPSLLKSLALSPAVPGARGLALAVHAHAVKLGLAGFLLVSNALIRVHAGILGRL 262
Query: 170 --------------------LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
LIT Y G V A+ LFD+M +N V+W+AM+NG+V+
Sbjct: 263 SDALVLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAG 322
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ RE + LF +M+ GV ++ LV VL+ACA LG E GKWVH ++ N I + LG
Sbjct: 323 DGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGT 382
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG ++ A+ VFK++ EKNV W ++I GLA+HG G EA+++F QM+ G+KP
Sbjct: 383 ALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKP 442
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
DD+ I L AC+H GL++KG+E+F +M R Y ++P ++HYGC+VDLL R LL+EA E+
Sbjct: 443 DDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREM 502
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
+ MPM+P+A++WG+L+ C NVELAE ++ I+LEP G YVL+ NIYAA
Sbjct: 503 VEKMPMKPDALIWGALMAGCRFHK---NVELAEYVVKHWIELEPDKSGAYVLLGNIYAAS 559
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+ A ++R LM+E+ + K PGCS +EI V+H+F+VGD HP EEI S + + +
Sbjct: 560 GRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKWDEIDSRI 619
Query: 510 R-EECY 514
R EE Y
Sbjct: 620 RLEEGY 625
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 181/439 (41%), Positives = 277/439 (63%), Gaps = 7/439 (1%)
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL 127
L+ LI + +A A L+F+ + +N +I Y + G ++++ M+ G+
Sbjct: 157 LSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGV 216
Query: 128 DPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHS---LTRLITFYCNFGDVKSAQ 184
D T ++ ACG + K + V + D ++ + +T LI Y G++ A+
Sbjct: 217 AFDEITLVSVVTACGRIGDAK-LGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKAR 275
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
LFD M ++VV W+AMI+G+ + RE + LF +M+ + VE N++T+VSVLSACA LG
Sbjct: 276 RLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLG 335
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
A E GKWVH ++ + + L LG AL D YAKCG I++A+ F+ + KN TW ++I
Sbjct: 336 ALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIK 395
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVE 364
G+A +G G EA+++F M+ + I+P DVT I VL ACSH+ L+E+G+ F +M +DY ++
Sbjct: 396 GMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIK 455
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIA 424
P +HYGC+VDLL RA L+DEAY+ IR MP+EPNAV+W +LL++CA NVE+ E A
Sbjct: 456 PRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHK---NVEIGEEA 512
Query: 425 MERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHE 484
+++++ L P + G+Y+L+SNIYA+ QW +A +R+ MK+R I K PGCS+IE++ VV E
Sbjct: 513 LKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVE 572
Query: 485 FMVGDGRHPCSEEIYSMLE 503
F D HP +EIY +E
Sbjct: 573 FFAEDSDHPQLKEIYQKVE 591
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 114/239 (47%), Gaps = 8/239 (3%)
Query: 213 EGIDLFRKMRD-SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
+ + LF +M D + V ++ T+ L +C+ + ++G+ + + K ++ + + ++L
Sbjct: 101 DALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSL 160
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
MYA C + A +F V E V WN+II +G E V+MF M G+ D+
Sbjct: 161 IHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDE 220
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
+TL++V+TAC G + GK + + V N L+D+ + L +A +
Sbjct: 221 ITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVR-NRNLMTALIDMYAKCGELGKARRLFD 279
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
M + V W ++++ AD LA + +L ++EP N V M ++ +A A
Sbjct: 280 GM-QSRDVVAWSAMISGYTQADQ-CREALALFSEMQLAEVEP----NDVTMVSVLSACA 332
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 191/496 (38%), Positives = 300/496 (60%), Gaps = 20/496 (4%)
Query: 17 SANSHKNSNTATKSHHHL------PLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK 70
S H NSN+ KS L LLQ+ H+ Q +HAQ+I+ + + + +
Sbjct: 13 SPKPHPNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIR---NGHSQDPFMVFE 69
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
L+ S I YA +F NP+ + + +I G+ +G IQLY++M+ + + PD
Sbjct: 70 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPD 129
Query: 131 SFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
++ +LKACG LR+ + VHS +K ++ + L R++ Y G++ A+ +F
Sbjct: 130 NYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRL-RIMELYGKCGELGDARRVF 188
Query: 188 DQMTE----KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
++M E K+ V WTAMI+G V+ + ++ FR M+ V NE T+V VLSAC+ L
Sbjct: 189 EEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQL 248
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
GA E+G+WVH ++ K I LN +G AL +MY++CG I+EA VF + +++V T+N++I
Sbjct: 249 GALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMI 308
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
GL+++G +A+++F M ++P +VT + VL ACSH GL++ G +IF++M RDY V
Sbjct: 309 SGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGV 368
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
EP ++HYGC+VDLL R L+EAY++IR M M P+ ++ G+LL+AC N+EL E
Sbjct: 369 EPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMH---KNLELGEQ 425
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVH 483
+ L + G YVL+S++YA+ +W +A ++R MKE + K PGCS IE+N+ +H
Sbjct: 426 VAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIH 485
Query: 484 EFMVGDGRHPCSEEIY 499
EF++GD RHP E IY
Sbjct: 486 EFLLGDLRHPRKERIY 501
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 194/529 (36%), Positives = 302/529 (57%), Gaps = 49/529 (9%)
Query: 33 HLP-------LLQKCTHLVQF---KQVHAQIIKASF---------------------DNR 61
HLP LL+ C F +Q+HAQ++K D R
Sbjct: 60 HLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDAR 119
Query: 62 TISDTQLAK-------LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHR 114
+ D + LI + A VF++I ++N +I GY E G
Sbjct: 120 KVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEE 179
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSK---DFNSVIHSLT 168
++L+ +M+ + PD T ++ AC G + + VHS V F+S + +
Sbjct: 180 ALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVN 239
Query: 169 RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV 228
LI Y GDV++A LF+ ++ K+VV+W +I G+ Y+E + LF++M SG
Sbjct: 240 ALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECP 299
Query: 229 NELTLVSVLSACANLGASELGKWVHEFVNKNC--IILNDKLGAALTDMYAKCGYIEEALR 286
N++TL+SVL ACA+LGA ++G+W+H +++K + L +L DMYAKCG IE A +
Sbjct: 300 NDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQ 359
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF +L +++ +WN++I G A+HG A +F +M+ + ++PDD+T + +L+ACSH+GL
Sbjct: 360 VFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGL 419
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
++ G++IF +M +DY + P ++HYGC++DLL + L EA E+I MPMEP+ V+W SLL
Sbjct: 420 LDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLL 479
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
AC N+ELAE ++LIK+EP N G+YVL+SNIYA +W+D ++R ++ +
Sbjct: 480 KACKKH---GNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKG 536
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
+ K PGCS IE++ VVHEF++GD HP EIY MLE + + L E +A
Sbjct: 537 MKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFA 585
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 206/374 (55%), Gaps = 42/374 (11%)
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
+ YA VF I P+ +NT++RG+A + +++Y +M+ G P+S+++P LLK+
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73
Query: 141 CGD---LRQVKGVHSLVVK--------------------------SKDFNSVIH----SL 167
C + + +H+ V+K K F++ H S
Sbjct: 74 CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSC 133
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
T LIT Y + GD +SA+ +FD++TE++VV+W AMI G+V+ Y E ++LF++M + V
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFV----NKNCIILNDKLGAALTDMYAKCGYIEE 283
+E TLVSV+SACA G+ ELG+ VH +V + + + K+ AL D+Y+KCG +E
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A +F+ + K+V +WN++IGG +EA+ +F +M SG P+DVTL++VL AC+H
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAH 313
Query: 344 AGLIEKGKEIFYNMRRDYK-VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP----N 398
G I+ G+ I + + K V L+D+ + ++ A++V +M N
Sbjct: 314 LGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWN 373
Query: 399 AVLWGSLLTACASA 412
A+++G + A+A
Sbjct: 374 AMIFGFAMHGRANA 387
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 128/265 (48%), Gaps = 35/265 (13%)
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
+F + A +F+ + E N++ W M+ GH + ++++ +M G N +
Sbjct: 10 HFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPF 69
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI----- 290
+L +CA A E G+ +H V K L+ + +L MYA+ G +E+A +VF
Sbjct: 70 LLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRD 129
Query: 291 --------------------------VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
+ E++V +WN++I G +G EEA+++F +M
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR 189
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEI---FYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
+ ++PD+ TL++V++AC+ +G IE G+++ + D+ ++K L+DL +
Sbjct: 190 TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLL 406
++ A+ + + + + V W +L+
Sbjct: 250 DVETAFGLFEGLSCK-DVVSWNTLI 273
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 195/532 (36%), Positives = 310/532 (58%), Gaps = 22/532 (4%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATK---SHHHLP-------LLQKCTHLVQFKQ-- 48
+L L NS L F NS + + T+ ++P LL+ C L++FK
Sbjct: 40 VLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGK 99
Query: 49 -VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
+H Q++K + +T L + + + A +F ++ + + + ++I GY
Sbjct: 100 VLHGQVVKYMLHSDLYIETTLLNMYAA---CGDLKSARFLFERMGHRNKVVWTSMISGYM 156
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSL 167
+ + + LY +M +G PD T L+ AC +L+ + L ++ + I ++
Sbjct: 157 KNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAV 216
Query: 168 --TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD-S 224
+ L+ Y GD+K+A+ +FDQ+++K+V W+A+I G+VK E + LFR++ S
Sbjct: 217 LGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGS 276
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
+ NE+T+++V+SACA LG E G+WVH+++ + + L +L DM++KCG I+ A
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAA 336
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
R+F + K++ +WNS++ GLA+HG G EA+ F MQ + ++PD++T I VLTACSHA
Sbjct: 337 KRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHA 396
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
GL+++GK++FY + Y V +HYGC+VDLLCRA LL EA E IR MP++P+ +WGS
Sbjct: 397 GLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGS 456
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
+L AC + N+EL E A L++LEP NDG Y+L+SNIYA + W++ K+R LM E
Sbjct: 457 MLGACRVYN---NLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNE 513
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
+ I K PGCS + I+++ H F+ GD HP EI ML V L+ Y A
Sbjct: 514 KGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVA 565
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 207/373 (55%), Gaps = 11/373 (2%)
Query: 68 LAKLIESLVN--SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN 125
L KLI +++ S + YA+ VF +N+++R + + + R +Q YT+M+
Sbjct: 13 LNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLER 72
Query: 126 GLD-PDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
+ PD FT+P LLK C L + K +H VVK +S ++ T L+ Y GD+K
Sbjct: 73 SRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYM-LHSDLYIETTLLNMYAACGDLK 131
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
SA+ LF++M +N V WT+MI+G++K E + L++KM + G +E+T+ +++SACA
Sbjct: 132 SARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACA 191
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
L +G +H + + + + LG+AL +MYAKCG ++ A +VF + +K+V W++
Sbjct: 192 ELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSA 251
Query: 302 IIGGLAIHGCGEEAVKMFWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
+I G + EA+++F ++ S ++P++VT++AV++AC+ G +E G+ + + R
Sbjct: 252 LIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT 311
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
K +V L+D+ + +D A + +M + + + W S++ A G L
Sbjct: 312 QKGH-SVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGLALHGLGREA-L 368
Query: 421 AEIAMERLIKLEP 433
A+ + + L+P
Sbjct: 369 AQFHLMQTTDLQP 381
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/479 (39%), Positives = 299/479 (62%), Gaps = 19/479 (3%)
Query: 36 LLQKCTHLV---QFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQI 91
+L+ CT + + +QVH +K F + D + L+ + A VF+++
Sbjct: 111 VLKACTKFLGVQEGEQVHGVAVKMGF----LCDLYVQNSLLHFYSVCGKWGGAGRVFDEM 166
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVK 148
+ ++ +I GY GL I L+ +M + P+ T+ +L ACG L K
Sbjct: 167 LVRDVVSWTGLISGYVRTGLFDEAINLFLKM---DVVPNVATFVSVLVACGRMGYLSMGK 223
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
GVH LV K + F + L+ Y + A+ LFD++ ++++V+WT++I+G V+
Sbjct: 224 GVHGLVYK-RAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQC 282
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
K ++ ++LF M+ SGVE + + L SVLSACA+LGA + G+WV E++ + I + +G
Sbjct: 283 KQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIG 342
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
AL DMYAKCG IE AL +F + +N+ TWN+++GGLA+HG G EA+K F M +GI+
Sbjct: 343 TALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIR 402
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
P++VT +A+LTAC H+GL+ +G+ FY M + + P ++HYGC++DLLCRA LLDEAY
Sbjct: 403 PNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAY 462
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
+ IRNMP+ P+ ++WG+LL+AC + NVEL++ + L++L+ + G YVL+SNIYA
Sbjct: 463 KFIRNMPLPPDVLIWGALLSACKA---NGNVELSQEILSHLLELKSQDSGVYVLLSNIYA 519
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
+WDD ++RRLMK++ I K PG SVIE++ HEF+VGD H +E+I+ +L +A
Sbjct: 520 TNERWDDVTRVRRLMKDKGIRKFPGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLNILA 578
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 200/383 (52%), Gaps = 12/383 (3%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI-INPS 95
+ +C + KQ+HA +I + + +++++ + + YA NQ ++
Sbjct: 12 IHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGF--VDYAFDFLNQTDLHVG 69
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHS 152
T +NT+I YA + +Y +++GNG PD +T+P++LKAC V+ VH
Sbjct: 70 TLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHG 129
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
+ VK F ++ L+ FY G A +FD+M ++VV+WT +I+G+V+ +
Sbjct: 130 VAVK-MGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFD 188
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E I+LF KM V N T VSVL AC +G +GK VH V K + +G AL
Sbjct: 189 EAINLFLKMD---VVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALV 245
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
DMY KC + EA ++F + ++++ +W SII GL ++++++F+ MQ+SG++PD +
Sbjct: 246 DMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRI 305
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
L +VL+AC+ G ++ G+ + + R +E ++ LVD+ + ++ A +
Sbjct: 306 ILTSVLSACASLGALDYGRWVQEYIERQ-GIEWDIHIGTALVDMYAKCGCIEMALHIFNG 364
Query: 393 MPMEPNAVLWGSLLTACASADDG 415
+P N W +LL A G
Sbjct: 365 IP-NRNIFTWNALLGGLAMHGHG 386
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/531 (36%), Positives = 308/531 (58%), Gaps = 22/531 (4%)
Query: 2 LKQLVPNSQLTHFTNSANSHKNSNTATK---SHHHLP-------LLQKCTHLVQFKQ--- 48
L L NS L F NS + + T+ ++P LL+ C L++FK
Sbjct: 41 LDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKV 100
Query: 49 VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE 108
+H Q++K + +T L + + + A +F ++ + + + ++I GY +
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNMYAA---CGDLKSARFLFERMGHRNKVVWTSMISGYMK 157
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSL- 167
+ + LY +M +G PD T L+ AC +L+ + L ++ + I ++
Sbjct: 158 NHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVL 217
Query: 168 -TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD-SG 225
+ L+ Y GD+K+A+ +FD++++K+V W+A+I G+VK E + LFR++ S
Sbjct: 218 GSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSN 277
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
+ NE+T+++V+SACA LG E G+WVH+++ + + L +L DM++KCG I+ A
Sbjct: 278 MRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAK 337
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
R+F + K++ +WNS++ G A+HG G EA+ F MQ + ++PD++T I VLTACSHAG
Sbjct: 338 RIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAG 397
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
L+++GK++FY + Y V +HYGC+VDLLCRA LL EA E IR MP++P+ +WGS+
Sbjct: 398 LVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSM 457
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L AC + N+EL E A L+KLEP NDG Y+L+SNIYA + W++ K+R LM E+
Sbjct: 458 LGACRVYN---NLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEK 514
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
I K PGCS + I+++ H F+ GD HP EI ML V L+ Y A
Sbjct: 515 GIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVA 565
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 207/373 (55%), Gaps = 11/373 (2%)
Query: 68 LAKLIESLVN--SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN 125
L KLI +++ S + YA+ VF +N+++R + + + R +Q YT+M+
Sbjct: 13 LNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLER 72
Query: 126 GLD-PDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
+ PD FT+P LLK C L + K +H VVK +S ++ T L+ Y GD+K
Sbjct: 73 SRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYM-LHSDLYIETTLLNMYAACGDLK 131
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
SA+ LF++M +N V WT+MI+G++K E + L++KM + G +E+T+ +++SACA
Sbjct: 132 SARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACA 191
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
L +G +H + + + + LG+AL +MYAKCG ++ A +VF + +K+V W++
Sbjct: 192 ELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSA 251
Query: 302 IIGGLAIHGCGEEAVKMFWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
+I G + EA+++F ++ S ++P++VT++AV++AC+ G +E G+ + + R
Sbjct: 252 LIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT 311
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
K +V L+D+ + +D A + +M + + + W S++ A G L
Sbjct: 312 QKGH-SVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGFALHGLGREA-L 368
Query: 421 AEIAMERLIKLEP 433
A+ + + L+P
Sbjct: 369 AQFRLMQTTDLQP 381
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/522 (37%), Positives = 315/522 (60%), Gaps = 14/522 (2%)
Query: 5 LVPNSQLTHFTNSANSHKNSNTATKSHHHLPLL--QKCTHLVQFKQVHA---QIIKASFD 59
L S L+ +T++ +S +A + P + K +HL + HA Q++
Sbjct: 9 LQARSNLSQWTHNLTIRPSSTSALTLCENPPQITESKHSHLTKSISNHAHMNQMLSQMIM 68
Query: 60 NR-TISDTQLAKLIESLVNSSQIAYAHLVFNQIIN-PSTFAFNTVIRGYAEAGLGHRGIQ 117
N I L KLI+ V+S A + L+F Q + N++IR Y ++ +
Sbjct: 69 NYIPIDHLNLMKLIDFSVSSHGFAASALLFTQFYGFIDSDLCNSMIRCYTDSNKHLHSVF 128
Query: 118 LYTQMIGNGLDPDSFTYPILLKACGDL-RQV--KGVHSLVVKSKDFNSVIHSLTRLITFY 174
+YTQM NG+ PDS T+P +LK+ L RQ K +H +++ F S ++ T L+ Y
Sbjct: 129 IYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQ-MGFESNVYVSTALVNMY 187
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
V A+ +FD++ ++N+V+W A+I G+ + +R+ ID+FR+M+ +G + E+T+V
Sbjct: 188 GTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMV 247
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
VL ACA+LGA G+W+ ++++ N + LN +G AL DMYAKCG ++EA ++FK + K
Sbjct: 248 GVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVK 307
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
NV TWN +I G A++G GE A++ F +M M KPD+VT + VL AC H GL+ +G+ F
Sbjct: 308 NVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYF 367
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
+M+ ++ + P ++HYGC+VDLL RA LDEA ++I+ M M+P+ ++W LL AC
Sbjct: 368 TSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIH-- 425
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
N++L E A+++L++LEP N NYVL++N+YA +WD G++R +M R + K PGCS
Sbjct: 426 -GNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCS 484
Query: 475 VIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
IEI++VV+EF+V + P EE+Y +L + L+ Y A
Sbjct: 485 SIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVA 526
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 192/503 (38%), Positives = 302/503 (60%), Gaps = 33/503 (6%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA--YAHLVFNQIINP 94
LQKC +L KQVHAQ++ +T + L L SS+ A YA +FN I NP
Sbjct: 12 LQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHL------LNTSSKFASTYAFTIFNHIPNP 65
Query: 95 STFAFNTVIRGYAE-AGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKACGD---LRQVKG 149
+ F +NT+I + H LY ++ + L P+SFT+P L KAC L+
Sbjct: 66 TLFLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPP 125
Query: 150 VHSLVVK--SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+H+ V+K ++ + + L+ FY +G + ++ LFDQ++E ++ TW M+ + +
Sbjct: 126 LHAHVLKFLQPPYDPFVQN--SLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQ 183
Query: 208 QKNY-------------REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
++ E + LF M+ S ++ NE+TLV+++SAC+NLGA G W H
Sbjct: 184 SASHVSYSTSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHG 243
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+V +N + LN +G AL DMY+KCG + A ++F + +++ +N++IGG A+HG G +
Sbjct: 244 YVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQ 303
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A++++ M++ + PD T++ + ACSH GL+E+G EIF +M+ + +EP ++HYGCL+
Sbjct: 304 ALELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLI 363
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
DLL RA L EA E +++MPM+PNA+LW SLL A A N+E+ E A++ LI+LEP
Sbjct: 364 DLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGA---AKLHGNLEMGEAALKHLIELEPE 420
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
GNYVL+SN+YA+ +W+D ++R LMK+ + K PG S++EIN +HEF+ GD HP
Sbjct: 421 TSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTGDKAHPF 480
Query: 495 SEEIYSMLEYVAISLREECYAAR 517
S+EIYS + + L E + R
Sbjct: 481 SKEIYSKIGEINRRLLEYGHKPR 503
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 185/466 (39%), Positives = 299/466 (64%), Gaps = 11/466 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSS--QIAYAHLVFNQIINPSTFAFNTVIRG 105
++HA+++K N ++ L +L+ S S+ ++YA +F+ I P TFAFNT+IR
Sbjct: 6 KLHARLLKTGHHNHPLA---LRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRA 62
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIH 165
+A++ + L+++M G+ PD FT+P +LKAC L+ +HSL+ K F+S ++
Sbjct: 63 HADSSPSFS-LSLFSKMAMAGVSPDHFTFPFVLKACARLQTGLDLHSLLFK-LGFDSDVY 120
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
LI FY G + A +F++M E+++V+W++MI K E + LF++M+ G
Sbjct: 121 VQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVG 180
Query: 226 -VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
V+ +E+ ++SV+SA + LG ELGKW+ F+++N + LG AL DM+++CG IEE+
Sbjct: 181 TVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEES 240
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
+RVF + E+NV TW ++I GLA+HG EA++MF++M+ G +PD VT VL ACSH
Sbjct: 241 MRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHG 300
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
GL+ +G +F ++R +Y +EP +HYGC+VDLL RA LL+EA + + MP+ PN+++W +
Sbjct: 301 GLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRT 360
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL AC + + +ELAE E++ +L+ ++DG+YVL+SN+Y +W + +R M+E
Sbjct: 361 LLGACVNHN---YIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMRE 417
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+ I K PGCS+I +N ++HEF+ GD HP E I L + SL+
Sbjct: 418 KRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLK 463
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/484 (38%), Positives = 294/484 (60%), Gaps = 13/484 (2%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
+ Q Q+ AQ+I + + + +A KLI + + + + A L+F + +P+ FA N
Sbjct: 1 MAQVLQIQAQLITSPIPSSVVDPNLIAVKLIGACADHANVRQAALIFAHLASPNIFAHNA 60
Query: 102 VIRGYAEAGLGHRGIQLYTQMIG--NGLDPDSFTYPILLKACGDLRQV---KGVHSLVVK 156
++ A+ IQ + + N +PD FT+ +LKAC L V + +H++V K
Sbjct: 61 TLKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTK 120
Query: 157 SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM--TEKNVVTWTAMINGHVKQKNYREG 214
+ F S + LI Y G + A+ LFD+M ++NVV W AMI G+ + + Y +
Sbjct: 121 -QGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDA 179
Query: 215 IDLFRKMRD-SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTD 273
I++FR M+ GV N++TLVSVL ACA+LGA +LGKW+ F+++ + L LG AL D
Sbjct: 180 IEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALGLFLGNALAD 239
Query: 274 MYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVT 333
MYAKCG I EA RVF + E++V +W+ II GLA++G +EA F++M G KP+DV
Sbjct: 240 MYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVV 299
Query: 334 LIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
+ +LTAC+HAGL++KG F M ++Y V P V+HYGC+VDLL RA LD+A ++I +M
Sbjct: 300 FMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSM 359
Query: 394 PMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWD 453
PM+PN ++WG+LL C D + ++ +++L+ + G+YV ++N+Y++ + D
Sbjct: 360 PMKPNVIIWGALLGGCRIYRDSGR---GQRVVQHILELDSDHSGSYVYLANVYSSMGRLD 416
Query: 454 DAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREEC 513
DA K R M+E ++K PGCS IE+++ VHEF +GD HP S +IYSM+ + ++
Sbjct: 417 DAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIRELMWKMKLAG 476
Query: 514 YAAR 517
Y +
Sbjct: 477 YKPK 480
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 149/340 (43%), Gaps = 36/340 (10%)
Query: 2 LKQLVPNSQLTHFTNSANSHKNSNTATKSHHHL--PLLQKCT---HLVQFKQVHAQIIKA 56
LK L NS H N +S A +L+ C H+V +++HA + K
Sbjct: 62 LKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQ 121
Query: 57 SFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII--NPSTFAFNTVIRGYAEAGLGHR 114
F++ LI+ + + A +F+++ + + +N +I GYA+
Sbjct: 122 GFESNLFVRNS---LIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSD 178
Query: 115 GIQLYTQMIG-NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRL 170
I+++ M G+ P+ T +L AC G L K + + + ++ + L
Sbjct: 179 AIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISR-REMALGLFLGNAL 237
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNE 230
Y G + A+ +F++M E++V++W+ +I G + E F +M D G + N+
Sbjct: 238 ADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPND 297
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK-LGAA--------LTDMYAKCGYI 281
+ + +L+AC + G + G NC DK G + + D+ ++ G +
Sbjct: 298 VVFMGLLTACTHAGLVKKG--------LNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGEL 349
Query: 282 EEALRVF-KIVLEKNVCTWNSIIGGLAIH---GCGEEAVK 317
++A + + ++ NV W +++GG I+ G G+ V+
Sbjct: 350 DKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQ 389
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 185/466 (39%), Positives = 298/466 (63%), Gaps = 11/466 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSS--QIAYAHLVFNQIINPSTFAFNTVIRG 105
++HA+++K N ++ L +L+ S S+ ++YA +F+ I P TFAFNT+IR
Sbjct: 6 KLHARLLKTGHHNHPLA---LRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRA 62
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIH 165
+A++ + L+++M G+ PD FT+P +LKAC L+ +HSL+ K F+S ++
Sbjct: 63 HADSSPSFS-LSLFSKMTMAGVSPDHFTFPFVLKACARLQTGLDLHSLLFK-LGFDSDVY 120
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
LI FY G + A F++M E+++V+W++MI K E + LF++M+ G
Sbjct: 121 VQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVG 180
Query: 226 -VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
V+ +E+ ++SV+SA + LG ELGKW+ F+++N + LG AL DM+++CG IEE+
Sbjct: 181 TVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEES 240
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
+RVF + E+NV TW ++I GLA+HG EA++MF++M+ G +PD VT VL ACSH
Sbjct: 241 MRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHG 300
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
GL+ +G +F ++R +Y +EP +HYGC+VDLL RA LL+EA + + MP+ PN+++W +
Sbjct: 301 GLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRT 360
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL AC + + +ELAE E++ +L+ ++DG+YVL+SN+Y +W + +R M+E
Sbjct: 361 LLGACVNHN---YIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMRE 417
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+ I K PGCS+I +N ++HEF+ GD HP E I L + SL+
Sbjct: 418 KRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLK 463
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/504 (39%), Positives = 298/504 (59%), Gaps = 39/504 (7%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQII 92
L LL+ C++ K +HA +++ + ++L A I+S N + YA V +QI
Sbjct: 21 LVLLECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTN--LLHYAIRVASQIQ 78
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---G 149
NP+ F +N +IRG + + Y + + GL PD+ T+P L+KAC L
Sbjct: 79 NPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQ 138
Query: 150 VHSLVVK---SKDF---NSVIH------------------------SLTRLITFYCNFGD 179
H +K +DF NS++H S T +I Y GD
Sbjct: 139 THGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGD 198
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
KSA+ LFD+M E+N+VTW+ MI+G+ + + + ++ F ++ GV NE +V V+S+
Sbjct: 199 AKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISS 258
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
CA+LGA +G+ HE+V +N + LN LG A+ DMYA+CG +E+A+ VF+ + EK+V W
Sbjct: 259 CAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCW 318
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
++I GLA+HG E+A+ F +M G P D+T AVLTACSHAG++E+G EIF +M+R
Sbjct: 319 TALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKR 378
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
D+ VEP ++HYGC+VDLL RA L +A + + MP++PNA +W +LL AC NVE
Sbjct: 379 DHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHK---NVE 435
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
+ E + L++++P G+YVL+SNIYA +W D MR++MK++ + K PG S+IEI+
Sbjct: 436 VGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEID 495
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLE 503
VHEF +GD HP E+I + E
Sbjct: 496 GKVHEFTIGDKTHPEIEKIERIWE 519
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 187/472 (39%), Positives = 287/472 (60%), Gaps = 12/472 (2%)
Query: 34 LPLLQKCTHLVQF----KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
+PL+ K L+Q +Q+HA+ IK + + + S+ S I VF+
Sbjct: 113 IPLVLKALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGS--IHDVQKVFD 170
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQ 146
+ + ++ T+I+ + +AGL R ++ + +M L D T ++L AC GDL
Sbjct: 171 ECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNL 230
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+ VHS + D + + L+ Y D+ SA +FD+M KNVVTW AMI+G
Sbjct: 231 GQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLA 290
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
Q YRE +D FR M+D GV+ +E+TLV VL++CANLG E+GKWVH ++ +N I+ +
Sbjct: 291 YQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKF 350
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+G AL DMYAKCG I+EA RVF+ + ++V ++ ++I GLA+HG A ++F +M G
Sbjct: 351 VGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVG 410
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
I+P++VT + +L ACSH GL+ +GK+ F+ M YK+ P +HYGC++DLL RA L+ EA
Sbjct: 411 IEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEA 470
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
E+I M + P+ G+LL AC NV++ E M++L +L+P +G Y+LM+N+Y
Sbjct: 471 EEIIHKMEIRPDVFACGALLGACRIH---GNVDIGESVMQKLTELDPDEEGTYILMTNLY 527
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
++ +W DA K+R+ MK + + K PGCS+IE++ VVHEF GD HP S+ I
Sbjct: 528 SSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVI 579
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 186/365 (50%), Gaps = 10/365 (2%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
L C + KQ+H IK + +L L S +S + Y + + +
Sbjct: 13 LNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSPDLFYIRSILLTHSHDAQ 72
Query: 97 FAF---NTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGV 150
F N +IR + + ++ +M+ GL+PD FT P++LKA +R+ + +
Sbjct: 73 FCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQI 132
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H+ +K+ ++ L+ Y G + Q +FD+ +++V+WT +I K
Sbjct: 133 HARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGL 192
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK-LGA 269
Y ++ F +M D + + TLV VLSAC+NLG LG+ VH ++ + D +G
Sbjct: 193 YSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGN 252
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMY KC + A +VF + KNV TWN++I GLA G EA+ F MQ G+KP
Sbjct: 253 ALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKP 312
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG-CLVDLLCRARLLDEAYE 388
D+VTL+ VL +C++ G++E GK + MRR++ + K G L+D+ + +DEA+
Sbjct: 313 DEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILAD--KFVGNALLDMYAKCGSIDEAFR 370
Query: 389 VIRNM 393
V +M
Sbjct: 371 VFESM 375
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 209/567 (36%), Positives = 314/567 (55%), Gaps = 85/567 (14%)
Query: 19 NSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKA--SFDNRTISDTQLAKL-IESL 75
N HK S +T LQ C + KQ+HA IIK S D + T+L+ L +SL
Sbjct: 34 NPHKLSFLST--------LQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSL 85
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA---------------------------- 107
+ YA + Q+ P+ +N +IRG A
Sbjct: 86 PIDPR--YALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTI 143
Query: 108 --------EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK---ACGDLRQVK-------- 148
E+ G +++ Q I GL D + L++ C +R +
Sbjct: 144 PFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQ 203
Query: 149 ---------------------GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
GV ++++ + N + L+ Y GD A+ +F
Sbjct: 204 RDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVF 263
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+M KNVV+W +MI+G ++ ++E + +FRKM+ GV+ +++TLV+VL++CANLG E
Sbjct: 264 QEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLE 323
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
LGKWVH ++++N I + +G AL DMYAKCG I++A VF+ + K+V ++ ++I GLA
Sbjct: 324 LGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLA 383
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
+HG G +A+ +F +M GI+PD+VT + VLTACSH GL+E+G++ F +M Y + P +
Sbjct: 384 MHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQL 443
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+HYGC+VDLL RA L++EA E IRNMP+EP+A + G+LL AC VEL E M++
Sbjct: 444 EHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIH---GKVELGESVMKK 500
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
+ K+EP DG YVLMSNIY++ +W DA K+R+ MKERN+ K PGCS IE++ V+HEF
Sbjct: 501 IEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQK 560
Query: 488 GDGRHPCSEEIYSMLEYVAISLR-EEC 513
GD HP +EIY +L+ + L+ EC
Sbjct: 561 GDKSHPKIKEIYKLLDEIMSHLKNNEC 587
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 302/547 (55%), Gaps = 78/547 (14%)
Query: 38 QKCTHLVQFKQVHAQIIKAS-FDNRTISDTQLAKLIESLVNS--SQIAYAHLVFNQIINP 94
+ T L KQVHA ++ F + +S T L++ N S + +A VF + NP
Sbjct: 38 KSSTSLHHLKQVHAVALRTGHFQDHYVSGT----LVKCYANPHFSNLNFALKVFEYVPNP 93
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC------------- 141
+ F FN +I+G + + I Y +M+ P+ FTYP L KAC
Sbjct: 94 NVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVH 153
Query: 142 ----------------------GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
G +V+G ++ +D NS + +I Y G+
Sbjct: 154 AHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRML--GEDGNSDVICFNAMIDGYLKCGE 211
Query: 180 VKSAQLLF-------------------------------DQMTEKNVVTWTAMINGHVKQ 208
V++A+ LF ++M EKN ++W+AMI+G++K
Sbjct: 212 VEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKG 271
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
Y+E +++F M+ + + L SVL+ACANLGA + G+W+H +VN N + LG
Sbjct: 272 GYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLG 331
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
AL DMYAKCG ++ A VF+ + +K V TWN++I GL +HG E+A+++F++MQ +
Sbjct: 332 TALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFR 391
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
P+ +TL+ VL+AC+H+G++++G IF +M Y +EP ++HYGC+VDLL RA LL EA E
Sbjct: 392 PNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEE 451
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
V+ +MPMEP+A +WG+LL AC D VEL E + L++LEP N G Y L+SNIYA
Sbjct: 452 VMYSMPMEPSAAVWGALLGACRKHGD---VELGERVGKILLELEPQNSGRYALLSNIYAR 508
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
+WDD +R+LMKER + + G S+I+ + VVHEF +GDG HP + IY ML+ +
Sbjct: 509 AGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKR 568
Query: 509 LREECYA 515
L+ E ++
Sbjct: 569 LKMEGFS 575
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 184/478 (38%), Positives = 296/478 (61%), Gaps = 17/478 (3%)
Query: 36 LLQKCTHLV---QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L+ C V + +QVH IIK F + L + A VF++++
Sbjct: 40 VLKSCAKFVGIGEGRQVHGVIIKMGFVCNIYVENSLVHFYSV---CKRFGDASRVFDEML 96
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKG 149
++ VI GY AGL + L+ +M ++P++ T+ +L ACG L KG
Sbjct: 97 VRDVVSWTGVISGYVRAGLFDEAVGLFLRM---DVEPNAATFVSVLVACGRKGYLSVGKG 153
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H L KS F + L+ Y G + A+ +FD++ EK++V+WT++I+G V+
Sbjct: 154 IHGLSFKSA-FGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCN 212
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+E ++LF+ M+ SG+E + + L SVLSACA LGA + G+WVHE +++ I + ++G
Sbjct: 213 CPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGT 272
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
A+ DMYAKCG IE ++++F + KNV TWN+++ GLA+HG + +++F +M G++P
Sbjct: 273 AMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRP 332
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMR-RDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
++VT +A+LTAC H GL+ +G++ F M+ + Y + P ++HYGC+VDLLCRARLLDEA E
Sbjct: 333 NEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALE 392
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
+ + MPM P+ + G+LL+AC + N EL + ++R ++L+ + G YVL+SNI+A
Sbjct: 393 LTKAMPMSPDVRIMGALLSAC---KENGNTELPQEILDRFVELDSHDSGVYVLLSNIHAI 449
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
+WDD ++RRLMKE+ I K PG +VIE++ HEF+VGD RHP + I +L+ ++
Sbjct: 450 NQRWDDVTRIRRLMKEKGIKKPPGSTVIELDGKAHEFIVGDTRHPQDKRIRLLLKILS 507
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 175/321 (54%), Gaps = 21/321 (6%)
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC------GDLRQVKGVHS 152
FN ++ GYA +Y +++ +G PD FT+P +LK+C G+ RQV G
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHG--- 58
Query: 153 LVVKSKDFNSVIHSLTRLITFYC---NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
V+ F I+ L+ FY FGD A +FD+M ++VV+WT +I+G+V+
Sbjct: 59 -VIIKMGFVCNIYVENSLVHFYSVCKRFGD---ASRVFDEMLVRDVVSWTGVISGYVRAG 114
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ E + LF +M VE N T VSVL AC G +GK +H K+ + ++
Sbjct: 115 LFDEAVGLFLRMD---VEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSN 171
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMY KCG + A +VF + EK++ +W SII GL C +EA+++F MQ SGI+P
Sbjct: 172 ALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEP 231
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D + L +VL+AC+ G ++ G+ + ++ R ++ +++ +VD+ + ++ + ++
Sbjct: 232 DGIILTSVLSACARLGALDYGRWVHEHIDRK-AIKWDIQIGTAMVDMYAKCGCIEMSMQI 290
Query: 390 IRNMPMEPNAVLWGSLLTACA 410
MP + N + W +LL A
Sbjct: 291 FNGMPHK-NVLTWNALLNGLA 310
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 293/488 (60%), Gaps = 42/488 (8%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
K++HA +I + + + L KLI + +SS + +A L+F+ I +PST+ +NT+ R
Sbjct: 5 KRLHAHLITSGLHQQ---ENHLRKLITLYTSSSSSSLHHARLLFDAIHHPSTYLYNTMFR 61
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDF---- 160
YA + + L+ M+ +G PD++T+P LLKAC L + L ++ F
Sbjct: 62 VYAASPTPLHALLLHRHMLRHGPPPDTYTFPFLLKACSALAHLPKGQELHCQALKFGLGG 121
Query: 161 -----NSVIH------------------------SLTRLITFYCNFGDVKSAQLLFDQMT 191
NS+IH S T L+ Y N VK+A+ +FD+M
Sbjct: 122 HVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIASWTTLLACYANSCSVKAARKVFDEMP 181
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
E++V++++AMI +V+ +RE +DLFR++ +E ++ ++SVL ACANLGA ++G+W
Sbjct: 182 ERSVISYSAMIAAYVRGNRFREALDLFRELFSVKIEPSDSCVMSVLCACANLGALDVGRW 241
Query: 252 VHEFV-NKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
V+ +V ++ ++ AL DM+ KCG IE AL VF+ EK+V W +++ GLA+HG
Sbjct: 242 VYSYVCQSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMHG 301
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
GE+ ++ F +M SG+KP+ VT +A+L+ CSH+GL+ +G F M D+ VEP V+H+
Sbjct: 302 LGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVEHF 361
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
GC+VDLL RA L+D+A ++I MP EPNA +WGSLL AC NVE+ E+A + LIK
Sbjct: 362 GCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYK---NVEIGELAAQWLIK 418
Query: 431 LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
EP+N Y+ + ++Y +WD+ K++ MKE K PGCS+IE+ + +EF+VGD
Sbjct: 419 DEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDK 478
Query: 491 RHPCSEEI 498
HPC+ EI
Sbjct: 479 SHPCAVEI 486
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 190/480 (39%), Positives = 282/480 (58%), Gaps = 20/480 (4%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
L +C+ L Q KQ+HAQ++KA+ + KLI + Q+ A VFNQI +P
Sbjct: 24 LHRCSSLNQVKQIHAQVLKANLHRESFVGQ---KLIAAFSLCRQMTLAVNVFNQIQDPDV 80
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSL 153
+NT+IR + ++ +M +G+ D+FTYP LLKAC +R V+ +H+
Sbjct: 81 LLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQ 140
Query: 154 VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYRE 213
V K F I LI Y G++ A+ LFD+M E++ V+W +++G+VK
Sbjct: 141 VEK-MGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNA 199
Query: 214 GIDLFRKM----------RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
+LF KM ++G++ ++ T++S+LSACA G LGK VH + +
Sbjct: 200 AFELFEKMPARNVVSWSTMEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKC 259
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+ + AL DMYAKCG +E AL +F ++ K+V +WN+II GLA+HG GE+A+++F +M+
Sbjct: 260 STPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMK 319
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
G PD VT + VL AC+HAG +++G F+ M RDY V P V+HYGC+VDLL R L
Sbjct: 320 GEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRL 379
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
EA+ ++ +MP+EPNA++WG+LL AC + LAE +RL+K E + GN ++S
Sbjct: 380 KEAFRLVHSMPLEPNAIIWGTLLGACRMH---SATGLAEEVFDRLVKSELSDSGNLSMLS 436
Query: 444 NIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
NIYAA WD+ +R MK +I K G S IE++D VHEF V D HP S+ IY ++
Sbjct: 437 NIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTID 496
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 183/497 (36%), Positives = 289/497 (58%), Gaps = 47/497 (9%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q KQ+HA ++ D+ LIE L+ + YA +F+QI PS + +N I+
Sbjct: 3 QLKQIHAYSLRNGLDHTKF-------LIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQ 55
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFN 161
++ G HR LY QM G P+ +++ L AC L V + +HS KS F
Sbjct: 56 TFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKS-GFA 114
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
S + ++T L+ Y G ++SA+ LFD+M +++ TW ++I G+ + + ++LF KM
Sbjct: 115 SDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKM 174
Query: 222 --------------------------------RDSGVEVNELTLVSVLSACANLGASELG 249
+ G + NE+++ SVL AC+ LGA ++G
Sbjct: 175 PVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIG 234
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGGLAI 308
K + + N N + A+ +++A+CG IEEA +VF +I ++N+C+WN++I GLA+
Sbjct: 235 KRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAV 294
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
HG +A++++ QM + ++PDDVT + +L AC+H G++ +G+++F +M ++V P ++
Sbjct: 295 HGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLE 354
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HYGCLVDLL RA L EAY +I+NMPM P++V+WG+LL AC+ NVEL E+A E L
Sbjct: 355 HYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFH---GNVELGEVAAESL 411
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
KLEP+N GNYV++SNIYA W ++R++MK +I K G S IE+ D +HEF+V
Sbjct: 412 FKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHEFIVE 471
Query: 489 DGRHPCSEEIYSMLEYV 505
D H S EIY++L +
Sbjct: 472 DRSHLKSGEIYALLHKI 488
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 127/299 (42%), Gaps = 38/299 (12%)
Query: 144 LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
+ Q+K +H+ ++ N + H+ LI D+ A LFDQ+ + +V + I
Sbjct: 1 MNQLKQIHAYSLR----NGLDHT-KFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQ 55
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
+ L+ +M G N+ + + ACA+L G+ +H K+
Sbjct: 56 TFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFAS 115
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+ AL DMYAK G + A ++F + +++ TWNS+I G A G E A+++F +M
Sbjct: 116 DMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMP 175
Query: 324 M--------------------------------SGIKPDDVTLIAVLTACSHAGLIEKGK 351
+ G KP++V++ +VL ACS G ++ GK
Sbjct: 176 VRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGK 235
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
I R+ N +++L R ++EA +V + + N W +++ A
Sbjct: 236 RI-EAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLA 293
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 299/522 (57%), Gaps = 46/522 (8%)
Query: 17 SANSHKNSNTATKSHHHL------PLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK 70
S H NSN+ KS L LLQ+ H+ Q +HAQ+I+ + + + +
Sbjct: 30 SPKPHPNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIR---NGHSQDPFMVFE 86
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
L+ S I YA +F NP+ + + +I G+ +G IQLY++M+ + PD
Sbjct: 87 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPD 146
Query: 131 SFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
++ +LKACG LR+ + VHS +K F+S R++ Y G++ A+ +F
Sbjct: 147 NYLMASILKACGSQLALREGREVHSRALK-LGFSSNRLVRLRIMELYGKCGELGDARRVF 205
Query: 188 DQMTE------------------------------KNVVTWTAMINGHVKQKNYREGIDL 217
++M E K+ V WTAMI+G V+ + ++
Sbjct: 206 EEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEA 265
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
FR M+ V NE T+V VLSAC+ LGA E+G+WVH ++ K I LN +G AL +MY++
Sbjct: 266 FRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSR 325
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG I+EA VF + +++V T+N++I GL+++G +A+++F M ++P +VT + V
Sbjct: 326 CGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGV 385
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
L ACSH GL++ G EIF++M RDY+VEP ++HYGC+VDLL R L+EAY++IR M M P
Sbjct: 386 LNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTP 445
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
+ ++ G+LL+AC N+EL E + L + G YVL+S++YA+ +W +A +
Sbjct: 446 DHIMLGTLLSACKMHK---NLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQ 502
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
+R MKE + K PGCS IE+N+ +HEF++GD RHP E IY
Sbjct: 503 VRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIY 544
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 191/503 (37%), Positives = 292/503 (58%), Gaps = 43/503 (8%)
Query: 16 NSANSHKNSNTATKSHHHLP--LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE 73
S N ++ N +S L LL+ + +QVHAQIIK N +S L ++
Sbjct: 45 QSPNRNQIHNVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKT---NAPLSILPLTRVGL 101
Query: 74 SLVNSSQIAYAHLVFNQI--INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS 131
+ YA +F + P TF +N+ ++ AE I L+ ++ + PD+
Sbjct: 102 VCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDT 161
Query: 132 FTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
FT +L+AC N D+ + ++L +
Sbjct: 162 FTCSSVLRAC---------------------------------LNLLDLSNGRILHGVVE 188
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+ +WT+MI G+V+ +E I LF KM ++GV+ NE+T+V+VL+ACA+LGA +LG
Sbjct: 189 KVGFRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMR 248
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+HE+ N++ N ++ L DMY KCG +EEA +VF+ + E+ V +W+++IGGLA+HG
Sbjct: 249 IHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGR 308
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
EEA+++F M GI+P+ VT I +L ACSH GLI +G+ F +M RDY + P ++HYG
Sbjct: 309 AEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYG 368
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VDLL RA LL EA+E I NMPM+PN V+WG+LL AC NVE+AE A++ L++L
Sbjct: 369 CMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHK---NVEMAEEAIKHLLEL 425
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
+P NDG YV++SNIYA +W+D ++R+ MK+R + K PG S I ++ VVHEF+ G+
Sbjct: 426 DPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEES 485
Query: 492 HPCSEEIYSMLEYVAISLREECY 514
HP +E+I+ E + +R + Y
Sbjct: 486 HPDTEQIFQRWEELLEEMRLKGY 508
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 197/514 (38%), Positives = 299/514 (58%), Gaps = 43/514 (8%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LL+KC ++ KQ HAQ+ D T + ++L S + YA VF +I +
Sbjct: 9 LVLLEKCKNVNHLKQAHAQVFTTGLDTNTFALSRLLAFCSHPYQGS-LTYACRVFERIHH 67
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGV 150
P+ NT+I+ + G + ++T+M+ NGL PD++T P +LKAC LR K V
Sbjct: 68 PTLCICNTIIKTFLVNGNFYGTFHVFTKMLHNGLGPDNYTIPYVLKACAALRDCSLGKMV 127
Query: 151 H----------------SLVVKSKDFNSVIH--------------SLTRLITFYCNFGDV 180
H SL+ VI S + +I+ Y GDV
Sbjct: 128 HGYSSKLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSWSVMISGYAKVGDV 187
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
SA+L FD+ EK+ W AMI+G+V+ ++EG+ LFR ++ + V +E VS+LSAC
Sbjct: 188 DSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVSILSAC 247
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A+LGA ++G W+H ++N+ + L+ +L +L DMYAKCG +E A R+F + E+++ WN
Sbjct: 248 AHLGALDIGIWIHRYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLFDSMPERDIVCWN 307
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
++I GLA+HG G A+KMF +M+ +GIKPDD+T IAV TACS++G+ +G ++ M
Sbjct: 308 AMISGLAMHGDGASALKMFSEMEKTGIKPDDITFIAVFTACSYSGMAHEGLQLLDKMSSL 367
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM-----EPNAVLWGSLLTACASADDG 415
Y++EP +HYGCLVDLL RA L EA +IR + + W + L+AC +
Sbjct: 368 YEIEPKSEHYGCLVDLLSRAGLFGEAMVMIRRITSTSWNGSEETLAWRAFLSACC---NH 424
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
+LAE A +RL++LE + G YVL+SN+YAA + DA ++R +M+ + + K PGCS
Sbjct: 425 GQAQLAERAAKRLLRLEN-HSGVYVLLSNLYAASGKHSDARRVRNMMRNKGVDKAPGCSS 483
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+EI+ VV EF+ G+ HP EEI+S+LE + + L
Sbjct: 484 VEIDGVVSEFIAGEETHPQMEEIHSVLEILHMQL 517
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 186/521 (35%), Positives = 301/521 (57%), Gaps = 67/521 (12%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L + T + + Q HA I+K+ + T + ++L + + ++ I YAH +F++I N
Sbjct: 11 LSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPN 70
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGV 150
P+++ +NT+IR YA + + ++ QM+ + PD +T+ LK+CG V + +
Sbjct: 71 PNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQI 130
Query: 151 HSLVVKS---KDF---NSVIH------------------------SLTRLITFYCNFGDV 180
H V+K+ D N++IH S L++ Y G +
Sbjct: 131 HGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLM 190
Query: 181 KSAQLLFDQMTE-------------------------------KNVVTWTAMINGHVKQK 209
+ A LFD+MTE KNVV+W AMI G+
Sbjct: 191 ELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAG 250
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ E + LF M+ +GV+ + TLVSVLSACA++GA G+WVH +++KN I ++ +
Sbjct: 251 RFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVAT 310
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMY+KCG IE+AL VF L K++ TWNSII GL+ HG G+ A+++F +M + G KP
Sbjct: 311 ALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKP 370
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
++VT + VL+ACS AGL+++G+E+F M + ++P ++HYGC+VDLL R LL+EA E+
Sbjct: 371 NEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEEL 430
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
++ MP + +V+W SLL AC + NVELAE ++L++L P ++V +SN+YA+
Sbjct: 431 VQKMPQKEASVVWESLLGAC---RNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASM 487
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
+W D ++R+ M+ + + K+PGCS+IE++ V+EF+ G+G
Sbjct: 488 GRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTVYEFLAGEG 528
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/478 (38%), Positives = 307/478 (64%), Gaps = 13/478 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIIN 93
L++KC + +Q+HA+++ + +IS L K+I +L I YA +F+QI
Sbjct: 63 LIRKCRSMRVLRQIHARLLTHAMPISSIS-FGLCKIIGFCALSPYGDIDYARKLFSQIQR 121
Query: 94 PSTFAFNTVIRGYAEAGLGHR-GIQLYTQMIGNGL-DPDSFTYPILLKACG---DLRQVK 148
P+ F++N++IRG +++ + + L+ +M+ G +P++FT +LKAC L + +
Sbjct: 122 PNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQ 181
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
VH+ V+KS F S T L+ FY D+ A +FD++T++N+V W+ MI+G+ +
Sbjct: 182 QVHANVLKS-GFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARI 240
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
E + LFR M+ +GV +E+T+VSV+SACA GA + GKWVH ++NK I + +L
Sbjct: 241 GLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELS 300
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
AL +MYAKCG IE A VF + K+ W+S+I GLAI+G E+A++ F++M+ + +K
Sbjct: 301 TALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVK 360
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
P+ VT I VL+AC+H+GL+ +G+ + +M ++ + P+++ YGC+VDLLCRA L+++A
Sbjct: 361 PNHVTFIGVLSACAHSGLVSEGRRYWSSM-LEFGIVPSMELYGCMVDLLCRASLVEDACT 419
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
++ MP+ PN V+W +LL C + N++ +E+ +RL++LEP N NY+L+SN+YA+
Sbjct: 420 LVETMPISPNPVIWRTLLVGCKKSK---NLDKSEVVAQRLLELEPHNAENYILLSNLYAS 476
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
+QW+ ++R+ MK I PGCS IE++ +VHEF++GD HP + E+ +L ++
Sbjct: 477 MSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDIS 534
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/498 (39%), Positives = 286/498 (57%), Gaps = 48/498 (9%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q KQ+H ++ D I LIE L+ + YAH V + P+ F +N +I+
Sbjct: 3 QVKQIHGYTLRNGIDQTKI-------LIEKLLEIPNLHYAHKVLHHSPKPTLFLYNKLIQ 55
Query: 105 GYAE-AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDF 160
Y+ H+ LY+QM+ + P+ T+ L AC L + +H+ +KS F
Sbjct: 56 AYSSHPQHQHQCFSLYSQMLLHSFLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKS-GF 114
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMT----------------------------- 191
+ + T L+ Y G ++ A+ LFDQM
Sbjct: 115 EPDLFAATALLDMYTKVGTLELARKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFRL 174
Query: 192 --EKNVVTWTAMINGHVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASEL 248
+NVV+WT MI+G+ + K Y E + LF +M ++ G+ N +TL S+ A ANLGA E+
Sbjct: 175 MPSRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEI 234
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGGLA 307
G+ V + KN N + A+ +MYAKCG I+ A +VF +I +N+C+WNS+I GLA
Sbjct: 235 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLA 294
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
+HG + +K++ QM G PDDVT + +L AC+H G++EKG+ IF +M + + P +
Sbjct: 295 VHGECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPKL 354
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+HYGC+VDLL RA L EAYEVI+ MPM+P++V+WG+LL AC+ D NVELAEIA E
Sbjct: 355 EHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHD---NVELAEIAAES 411
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L LEP+N GNYV++SNIYA+ QWD K+R++MK I K+ G S IE +H+F+V
Sbjct: 412 LFALEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGGQLHKFIV 471
Query: 488 GDGRHPCSEEIYSMLEYV 505
D HP S EI+++L+ V
Sbjct: 472 EDRSHPESNEIFALLDGV 489
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/510 (38%), Positives = 295/510 (57%), Gaps = 19/510 (3%)
Query: 5 LVPNSQLTHFT-NSANSHKNSNTATKSHHHL------PLLQKCTHLVQFKQVHAQIIKAS 57
L+PNS F S K + H H+ P L T L+ + ++ A
Sbjct: 62 LLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAH 121
Query: 58 --FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHR 114
FD + D LI +S I A +F++I ++N +I GYAE G
Sbjct: 122 KVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKE 181
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLI 171
++L+ +M+ + PD T +L AC R V + VHS + F S + + LI
Sbjct: 182 ALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWI-DDHGFGSNLKIVNALI 240
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
Y G V++A LF+ ++ K+VV+W +I G+ Y+E + LF++M SG N++
Sbjct: 241 DLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDV 300
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILND--KLGAALTDMYAKCGYIEEALRVFK 289
T+VS+L ACA+LGA ++G+W+H +++K + + L +L DMYAKCG IE A +VF
Sbjct: 301 TIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFN 360
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+L K++ +WN++I G A+HG +F +M+ +GI+PDD+T + +L+ACSH+G ++
Sbjct: 361 SMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDL 420
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
G+ IF +M +DY + P ++HYGC++DLL + L EA E+I+ MPMEP+ V+W SLL AC
Sbjct: 421 GRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKAC 480
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
N+ELAE L+K+EP N G+YVL+SNIYA +WD+ K+R L+ + + K
Sbjct: 481 RRH---GNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKK 537
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
PGCS IEI+ VHEF+VGD HP + EIY
Sbjct: 538 VPGCSSIEIDSEVHEFIVGDKLHPRNREIY 567
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 214/385 (55%), Gaps = 41/385 (10%)
Query: 69 AKLIESLVNSSQI---AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN 125
+KL+E V S YA VF I P+ +NT++RGYA + ++LY MI
Sbjct: 1 SKLLEFCVLSPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISL 60
Query: 126 GLDPDSFTYPILLKACG------DLRQVKG------------VHSLVVK----------- 156
GL P+S+T+P LLK+C + +Q+ G VH+ ++
Sbjct: 61 GLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDA 120
Query: 157 SKDFNSVIH----SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
K F+ H S T LIT Y + G+++SAQ +FD++ K+VV+W AMI+G+ + +Y+
Sbjct: 121 HKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYK 180
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E ++LF++M + V +E T+V+VLSACA + ELG+ VH +++ + N K+ AL
Sbjct: 181 EALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALI 240
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
D+Y+KCG +E A +F+ + K+V +WN++IGG +EA+ +F +M SG P+DV
Sbjct: 241 DLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDV 300
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY-GCLVDLLCRARLLDEAYEVIR 391
T++++L AC+H G I+ G+ I + + K N L+D+ + ++ A++V
Sbjct: 301 TIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFN 360
Query: 392 NMPMEP----NAVLWGSLLTACASA 412
+M + NA+++G + A+A
Sbjct: 361 SMLHKSLSSWNAMIFGFAMHGRANA 385
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/501 (37%), Positives = 298/501 (59%), Gaps = 41/501 (8%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ-IAYAHLVFNQIINPSTFAFNTVIRG 105
K++HA +I + + + L KLI +SS + +A L+F+ + +PST+ +NT+ R
Sbjct: 5 KRLHAHLITSGLHQQ---ENHLRKLITLYTSSSSSLHHARLLFDAVYHPSTYLYNTMFRV 61
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDF----- 160
YA + + L+ M +G PD++T+P LLKAC L + L ++ F
Sbjct: 62 YAASPTPLHALLLHRHMFRHGPPPDTYTFPFLLKACSALAHLLKGQELHCQALKFGLGGH 121
Query: 161 ----NSVIH------------------------SLTRLITFYCNFGDVKSAQLLFDQMTE 192
NS+IH S T L+ Y N V++A+ +FD+M E
Sbjct: 122 VFVENSLIHLYGSNSRMDSARRVFDGMGYRDIASWTTLLACYANSCSVEAARKVFDEMPE 181
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
++VV+++AM+ +V+ +RE ++LFR++ +E ++ ++SVL ACANLGA ++G+WV
Sbjct: 182 RSVVSYSAMLAAYVRGNRFREALELFRELFSVKIEPSDSCVMSVLCACANLGALDVGRWV 241
Query: 253 HEFV-NKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+ FV + ++ ++ AL DM+ KCG IE AL VF+ EK+V W +++ GLA+HG
Sbjct: 242 YSFVCHSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMHGL 301
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
GE+ ++ F +M SGIKPD+VT +A+L+ CSH+GL+ +G F M D+ VEP V+H+G
Sbjct: 302 GEQLIEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVEHFG 361
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VDLL RA L+D+A ++I MP EPNA +WG+LL AC NVE+ E+A + LIK
Sbjct: 362 CVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYK---NVEVGELAAQWLIKD 418
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
EP+N Y+ + ++Y +WD+ K++ MKE K PGCS+IE+ + +EF+VGD
Sbjct: 419 EPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDKS 478
Query: 492 HPCSEEIYSMLEYVAISLREE 512
HPC+ EI L + +E+
Sbjct: 479 HPCAVEICLNLSKANMEFKEQ 499
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 186/500 (37%), Positives = 288/500 (57%), Gaps = 40/500 (8%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFD---------------NRTISDTQ---------- 67
LL+ C FK Q+H Q++K FD N + D Q
Sbjct: 109 LLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRD 168
Query: 68 ---LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
LI + I AH +F++I ++N I GYAE G ++L+ +M+
Sbjct: 169 VVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMK 228
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
+ PD T +L AC G + + VHS + F + + LI Y G+++
Sbjct: 229 TNVRPDESTMVTVLSACAQSGSIELGRQVHSWI-NDHGFGXNLKIVNALIDLYSKCGELE 287
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
+A LF ++ K+V++W +I G+ Y+E + LF+ M SG + N++T++S+LSACA
Sbjct: 288 TACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACA 347
Query: 242 NLGASELGKWVHEFVNKNC--IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
+LGA ++G+W+H +++K + L +L DMYAKCG IE A +VF +L +++ +W
Sbjct: 348 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSW 407
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N++I G A+HG A +F +M+ +GI+PDD+T + +L+ACSH+G+++ G+ IF +M R
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTR 467
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
DYK+ P ++HYGC++DL + L EA ++I M MEP+ V+W SLL AC NVE
Sbjct: 468 DYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMH---GNVE 524
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
L E + LIK+EP N G+YVL+SNIYA +W++ K R L+ ++ + K PGCS IEI+
Sbjct: 525 LGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEID 584
Query: 480 DVVHEFMVGDGRHPCSEEIY 499
VVHEF++GD HP + EIY
Sbjct: 585 SVVHEFIIGDKFHPRNREIY 604
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 219/402 (54%), Gaps = 40/402 (9%)
Query: 29 KSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ---IAYAH 85
++H L LL C L + +HAQ+IK N ++ L+KL+E V S + YA
Sbjct: 1 RNHPSLSLLHXCKTLQSLRIIHAQMIKTGLHN---TNYALSKLLEXCVLSPHFDGLPYAI 57
Query: 86 LVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD-- 143
VF+ I P +NT+ RG+A + ++LY M+ GL P+S+T+P LLK+C
Sbjct: 58 SVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSX 117
Query: 144 -LRQVKGVHSLVVK-SKDFNSVIH-----------------------------SLTRLIT 172
++ + +H V+K D + IH S T LIT
Sbjct: 118 AFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALIT 177
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
Y + G ++SA +FD++ K+VV+W A I+G+ + NY+E ++LF+KM + V +E T
Sbjct: 178 GYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDEST 237
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
+V+VLSACA G+ ELG+ VH ++N + N K+ AL D+Y+KCG +E A +F+ +
Sbjct: 238 MVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLS 297
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
K+V +WN++IGG +EA+ +F M SG KP+DVT++++L+AC+H G I+ G+
Sbjct: 298 NKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRW 357
Query: 353 IFYNMRRDYKVEPNVKHY-GCLVDLLCRARLLDEAYEVIRNM 393
I + + K N L+D+ + ++ A +V +M
Sbjct: 358 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM 399
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 139/303 (45%), Gaps = 35/303 (11%)
Query: 137 LLKACGDLRQVKGVHSLVVKS--KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
LL C L+ ++ +H+ ++K+ + N + L +F + A +FD + E
Sbjct: 8 LLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPX 67
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
++ W M GH + + L+ M G+ N T +L +CA A + G+ +H
Sbjct: 68 LLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHG 127
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRV--------------------------- 287
V K L+ + +L MY + G +E+A +V
Sbjct: 128 QVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIES 187
Query: 288 ----FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
F + K+V +WN+ I G A G +EA+++F +M + ++PD+ T++ VL+AC+
Sbjct: 188 AHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQ 247
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
+G IE G+++ ++ D+ N+K L+DL + L+ A + + + + + W
Sbjct: 248 SGSIELGRQV-HSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLS-NKDVISWN 305
Query: 404 SLL 406
+L+
Sbjct: 306 TLI 308
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 190/507 (37%), Positives = 294/507 (57%), Gaps = 30/507 (5%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQII 92
+P + K + ++ +I S N +SD + L++ + A L+F+++
Sbjct: 112 IPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMS 171
Query: 93 NPSTFAFNTVIRGYAEA--GLGHRGI--------------------QLYTQMIGNGLDPD 130
+++T+IR Y G R I +L+ +MI + P+
Sbjct: 172 ERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPN 231
Query: 131 SFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T L+ +CG + V K +H+ ++++ F + T L+ Y G+++SA+ +F
Sbjct: 232 DITMLSLIISCGFVGAVQLGKRLHAYILRN-GFGMSLALATALVDMYGKCGEIRSARAIF 290
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
D M K+V+TWTAMI+ + + LF +MRD+GV NELT+VS+LS CA GA +
Sbjct: 291 DSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALD 350
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
+GKW H +++K + ++ L AL DMYAKCG I A R+F +++++CTWN ++ G
Sbjct: 351 MGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYG 410
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
+HG GE+A+K+F +M+ G+KP+D+T I L ACSHAGL+ +GK +F M D+ + P V
Sbjct: 411 MHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKV 470
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+HYGC+VDLL RA LLDEAY++I +MP+ PN +WG++L AC N + E+A
Sbjct: 471 EHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHK---NSNMGELAARE 527
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L+ LEP N G VLMSNIYAA +W+D MR+ +K+ I K PG S IE+N +VH+F +
Sbjct: 528 LLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKM 587
Query: 488 GDGRHPCSEEIYSMLEYVAISLREECY 514
GD HP E+I ML ++ L+E Y
Sbjct: 588 GDTAHPLIEKISEMLAEMSKKLKEAGY 614
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 196/419 (46%), Gaps = 75/419 (17%)
Query: 2 LKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNR 61
LKQ +P T S ++ N K P C L Q +Q+HA I + F++
Sbjct: 21 LKQPIPPPSTFTKTPQNPSPQHQNKHQKHPSFTPNNHLC--LDQTQQLHAHITRTHFNH- 77
Query: 62 TISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQ 121
+ Q++ F+ + +A NT YT
Sbjct: 78 ----------------AQQVS-----FSPFESHPRYALNT-----------------YTY 99
Query: 122 MIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG 178
M ++ DSF P +LKAC + R K +H VK+ S + + L+ Y G
Sbjct: 100 MRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKN-GLVSDVFVVNALMQMYSECG 158
Query: 179 DVKSAQLLFDQMTEKNV----------------------VTWTAMINGHVKQKNYREGID 216
+ SA+LLFD+M+E++V V+WTAMI G+++ + EG
Sbjct: 159 SLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGER 218
Query: 217 LFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYA 276
LF +M + V N++T++S++ +C +GA +LGK +H ++ +N ++ L AL DMY
Sbjct: 219 LFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYG 278
Query: 277 KCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIA 336
KCG I A +F + K+V TW ++I A C + A ++F QM+ +G++P+++T+++
Sbjct: 279 KCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVS 338
Query: 337 VLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA-------RLLDEAYE 388
+L+ C+ G ++ GK F+ VE +V L+D+ + RL EA +
Sbjct: 339 LLSLCAVNGALDMGK-WFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAID 396
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 109/225 (48%), Gaps = 26/225 (11%)
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
R ++ + MR +EV+ + SVL AC+ + + +GK +H F KN ++ + + AL
Sbjct: 91 RYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNAL 150
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG------------------- 312
MY++CG + A +F + E++V +W+++I G
Sbjct: 151 MQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRC 210
Query: 313 ---EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVK 368
EE ++F +M + P+D+T+++++ +C G ++ GK + Y +R + + ++
Sbjct: 211 NDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGM--SLA 268
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
LVD+ + + A + +M + + W ++++A A A+
Sbjct: 269 LATALVDMYGKCGEIRSARAIFDSMK-NKDVMTWTAMISAYAQAN 312
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 185/508 (36%), Positives = 293/508 (57%), Gaps = 42/508 (8%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
+KC + Q +Q H+QII+ + L S + YA +F+ I P
Sbjct: 29 FEKCQSMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDA 88
Query: 97 FAFNTVIRGYAEAGL--GHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLV 154
F +NT+I+G+ + L + + LY+ M+ N + P++FT+P LL AC ++ +H+ +
Sbjct: 89 FLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKIQHGMQIHAHL 148
Query: 155 VK------SKDFNSVIH------------------------SLTRLITFYCNFGDVKSAQ 184
K S NS+IH S T LI+ Y +G + A
Sbjct: 149 FKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAF 208
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV-NELTLVSVLSACANL 243
+F M +KN +W AM+ +V+ + E LF +M+ V ++ ++LSAC L
Sbjct: 209 TIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGL 268
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE--KNVCTWNS 301
GA + GKW+HE++ +N I L+ KL A+ DMY KCG +E+AL+VF + + + +WN
Sbjct: 269 GALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNC 328
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+IGGLA+HG GE A+++F +M+ + PDD+T + +LTAC+H+GL+E+G+ F M R Y
Sbjct: 329 MIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVY 388
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
+EP ++H+GC+VDLL RA ++ EA ++I MP+ P+ + G+LL AC N+EL
Sbjct: 389 GIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKH---RNIELG 445
Query: 422 EIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
E R+I+LEP N G YVL++N+YA +W+DA K+R+LM +R + K PG S+IE+
Sbjct: 446 EEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQGT 505
Query: 482 VHEFMVGDGRHPCSEE----IYSMLEYV 505
VHEF+ G+ HP ++E +Y MLE++
Sbjct: 506 VHEFIAGERNHPQAKELHAKVYEMLEHL 533
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 182/489 (37%), Positives = 296/489 (60%), Gaps = 15/489 (3%)
Query: 33 HLPLLQKC---THLVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVF 88
++ LL C T L +++H++++K F + D + LI I A L+F
Sbjct: 449 YVILLNACVNPTALHWGREIHSRVVKDGF----MFDISVQNALISMYARCGSIKDARLLF 504
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LR 145
N+++ ++ +I G A++GLG + ++ M GL P+ TY +L AC L
Sbjct: 505 NKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALD 564
Query: 146 QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
+ +H V+++ + H L+ Y G VK A+ +FD+MT++++V + AMI G+
Sbjct: 565 WGRRIHQQVIEA-GLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGY 623
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+E + LF ++++ G++ +++T +++L+ACAN G+ E K +H V K+ + +
Sbjct: 624 AAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDT 683
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
LG AL YAKCG +AL VF ++++NV +WN+IIGG A HG G++ +++F +M+M
Sbjct: 684 SLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKME 743
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
GIKPD VT +++L+ACSHAGL+E+G+ F +M RD+ + P ++HYGC+VDLL RA LDE
Sbjct: 744 GIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDE 803
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
+I+ MP + N +WG+LL AC NV +AE A E +KL+P N YV +S++
Sbjct: 804 VEALIKTMPFQANTRIWGALLGACRIH---GNVPVAERAAESSLKLDPDNAAVYVALSHM 860
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
YAA WD A K+R+LM++R + K PG S IE+ D +H F+ D HP SE+IY+ L+ +
Sbjct: 861 YAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKL 920
Query: 506 AISLREECY 514
+++ E Y
Sbjct: 921 THAMKMEGY 929
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 168/311 (54%), Gaps = 9/311 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESL-VNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
+++H + +KA R + D +A I ++ I A VF+++ S ++ +I G
Sbjct: 264 REIHVEAMKA----RLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGG 319
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNS 162
YA+ G +++ +M G+ P+ TY +L A L+ K VHS ++ + S
Sbjct: 320 YADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNA-GHES 378
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ T L+ Y G K + +F+++ ++++ W MI G + N+ E +++ +M+
Sbjct: 379 DLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQ 438
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
G+ N++T V +L+AC N A G+ +H V K+ + + + AL MYA+CG I+
Sbjct: 439 REGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIK 498
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+A +F ++ K++ +W ++IGGLA G G EA+ +F MQ +G+KP+ VT ++L ACS
Sbjct: 499 DARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACS 558
Query: 343 HAGLIEKGKEI 353
++ G+ I
Sbjct: 559 SPAALDWGRRI 569
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 228/480 (47%), Gaps = 53/480 (11%)
Query: 33 HLPLLQKCTH---LVQFKQVHAQIIK--ASFDNRTISDTQLAKLIESLVNSSQIAYAHLV 87
++ +L++C LV ++VH II+ D T++ LI + I A V
Sbjct: 144 YMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVN-----ALINMYIQCGSIEEARQV 198
Query: 88 FNQI--INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD-- 143
+N++ + ++N ++ GY + G ++L +M +GL T LL +C
Sbjct: 199 WNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPS 258
Query: 144 -LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
L + +H +K++ V + ++ Y G + A+ +FD+M K+VV+WT +I
Sbjct: 259 ALECGREIHVEAMKARLLFDV-NVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIII 317
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
G+ + ++F+KM+ GV N +T ++VL+A + A + GK VH +
Sbjct: 318 GGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHE 377
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
+ +G AL MYAKCG ++ +VF+ ++ +++ WN++IGGLA G EEA +++ QM
Sbjct: 378 SDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQM 437
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD---------------------- 360
Q G+ P+ +T + +L AC + + G+EI + +D
Sbjct: 438 QREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSI 497
Query: 361 --------YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP---MEPNAVLWGSLLTAC 409
V ++ + ++ L ++ L EA V ++M ++PN V + S+L AC
Sbjct: 498 KDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNAC 557
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYV-LMSNIYAAKAQWDDAGKMRRLMKERNIV 468
+S A ++ +++I+ D + + N+Y+ DA ++ M +R+IV
Sbjct: 558 SSP---AALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIV 614
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 130/247 (52%), Gaps = 10/247 (4%)
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVI--HSLT 168
R + + + G +S Y +LK C DL + VH +++ +V+ +++
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQ---HCTVLDQYTVN 180
Query: 169 RLITFYCNFGDVKSAQLLFDQM--TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
LI Y G ++ A+ +++++ TE+ V +W AM+ G+V+ E + L R+M+ G+
Sbjct: 181 ALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGL 240
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
+ T + +LS+C + A E G+ +H K ++ + + + +MYAKCG I EA
Sbjct: 241 ALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEARE 300
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF + K+V +W IIGG A G E A ++F +MQ G+ P+ +T I VL A S
Sbjct: 301 VFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAA 360
Query: 347 IEKGKEI 353
++ GK +
Sbjct: 361 LKWGKTV 367
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 188/483 (38%), Positives = 291/483 (60%), Gaps = 11/483 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L + C + + KQ+H K F + T + L + N + A VF+++ + +
Sbjct: 94 LFKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYS---NCGCLVSARKVFDKMEDKT 150
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDPDSFTYPILLKACG---DLRQVKGVH 151
++ T+I +A+ + ++L+ +M+ + P+ T +L AC DL VK +H
Sbjct: 151 VVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIH 210
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
+ F + T L+ YC G V+ A+ LFD+ EKN+ +W MINGHV+ NY
Sbjct: 211 EYI-DEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNY 269
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
E + LFR+M+ G++ +++T+ S+L AC +LGA ELGKW+H ++ K I ++ LG AL
Sbjct: 270 EEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTAL 329
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
DMYAKCG IE A++VF + EK+V TW ++I GLA+ G E A++ F +M + G+KPD
Sbjct: 330 VDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDA 389
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
+T + VL ACSHAG +++G F +M Y ++P ++HYG LVD+L RA + EA E+I+
Sbjct: 390 ITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIK 449
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
+MPM P+ + G LL AC N+E AE A ++L++++P++ G YVL+SNIY + +
Sbjct: 450 SMPMAPDQFVLGGLLGACRIH---GNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKK 506
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
W++A + R LM ER + K PGCS IE++ VVHEF+ GD H S EI MLE + L+
Sbjct: 507 WEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKN 566
Query: 512 ECY 514
Y
Sbjct: 567 AGY 569
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 210/381 (55%), Gaps = 16/381 (4%)
Query: 43 LVQFKQVHAQIIKAS--FDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFA 98
+ Q KQ+HAQ+++ FD T S K++ SL S + YA LVF+QI NP+++
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPFTAS-----KIVAFCSLQESGSLQYARLVFSQIPNPTSYT 55
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSK 158
N++IRG + L + Y +M+ GL PD +T+P L K+C + + K +H K
Sbjct: 56 CNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSEGKQIHCHSTK-L 114
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
F S ++ L+ Y N G + SA+ +FD+M +K VV+W MI H + E + LF
Sbjct: 115 GFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLF 174
Query: 219 -RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
R M+ V+ NE+TLV+VL+ACA + K +HE+++++ + L L D+Y K
Sbjct: 175 DRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCK 234
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG ++ A +F EKN+ +WN +I G EEA+ +F +MQ GIK D VT+ ++
Sbjct: 235 CGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASL 294
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
L AC+H G +E GK + +++ +++ +V LVD+ + ++ A +V MP E
Sbjct: 295 LLACTHLGALELGKWLHAYIKKQ-RIDVDVALGTALVDMYAKCGSIETAIQVFHEMP-EK 352
Query: 398 NAVLWGSL---LTACASADDG 415
+ + W +L L C A++
Sbjct: 353 DVMTWTALILGLAMCGQAENA 373
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 183/482 (37%), Positives = 279/482 (57%), Gaps = 11/482 (2%)
Query: 41 THLVQFKQVHAQIIKAS--FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTF 97
T L+ + +++ A FD ++ D LI + + A +F++I
Sbjct: 167 TSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVV 226
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLV 154
++N +I GYA++G + + +M + P+ T +L AC G Q+
Sbjct: 227 SWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSW 286
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG 214
++ + S I + LI Y GD++ A LF+++ +KNVV+W MI G+ Y+E
Sbjct: 287 IEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEA 346
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK--LGAALT 272
+ LFR+M S ++ N++T +S+L ACANLGA +LGKWVH +V+KN + + L +L
Sbjct: 347 LGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLI 406
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
DMYAKCG + A R+F + K++ TWN++I G A+HG + A+ +F +M G PDD+
Sbjct: 407 DMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDI 466
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
T + VLTAC HAGL+ G+ F +M +DYKV P + HYGC++DL RA L DEA +++N
Sbjct: 467 TFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKN 526
Query: 393 MPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQW 452
M M+P+ +W SLL AC +ELAE + L +LEP N YVL+SNIYA +W
Sbjct: 527 MEMKPDGAIWCSLLGACRIH---RRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRW 583
Query: 453 DDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
+D K+R + + + K PGCS IE++ VVHEF+VGD HP S EIY ML+ + + L +
Sbjct: 584 EDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKA 643
Query: 513 CY 514
+
Sbjct: 644 GF 645
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 229/447 (51%), Gaps = 45/447 (10%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDN 60
+L V Q+ F++ + +K H L LL C L KQ+H+QIIK N
Sbjct: 3 VLASPVSTLQVLSFSDPSPPYK----LVHDHPSLTLLSNCKTLQTLKQIHSQIIKTGLHN 58
Query: 61 RTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQL 118
+ L+KLIE ++ ++YA +F I NP+ +N +IRG + + ++
Sbjct: 59 THFA---LSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEY 115
Query: 119 YTQMIGNGLDPDSFTYPILLKACGDLR---QVKGVHSLVVK-SKDFNSVIH--------- 165
Y MI +G +P+ +T+P + K+C +R + K VH+ V+K + N+ +H
Sbjct: 116 YVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQ 175
Query: 166 --------------------SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
S T LIT Y + G + A+ LFD++ ++VV+W AMI+G+
Sbjct: 176 NGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGY 235
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS-ELGKWVHEFVNKNCIILN 264
+ E + F +MR + V N T++SVLSACA G+S +LG WV ++ + N
Sbjct: 236 AQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSN 295
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
+L L DMY KCG +EEA +F+ + +KNV +WN +IGG C +EA+ +F +M
Sbjct: 296 IRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQ 355
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN-VKHYGCLVDLLCRARLL 383
S I P+DVT +++L AC++ G ++ GK + + ++ K N V + L+D+ + L
Sbjct: 356 SNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDL 415
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACA 410
A + M + A W ++++ A
Sbjct: 416 AVAKRIFDCMNTKSLAT-WNAMISGFA 441
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 186/512 (36%), Positives = 293/512 (57%), Gaps = 40/512 (7%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQL------------------------ 68
LL+ C FK Q+H ++K +D T L
Sbjct: 140 LLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRD 199
Query: 69 ----AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
LI+ + I A +F++I ++N +I GYAE G ++L+ +M+
Sbjct: 200 VVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMK 259
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
+ PD T ++ AC G + + VHS + F S + + L+ Y G+++
Sbjct: 260 TNIRPDESTMVTVVSACAQSGSIELGRQVHSWI-DDHGFGSNLKIVNSLMDLYSKCGELE 318
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
+A LF+ + K+V++W +I G+ Y+E + LF++M SG N++T++S+L ACA
Sbjct: 319 TACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACA 378
Query: 242 NLGASELGKWVHEFVNKNCIILND--KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
+LGA ++G+W+H +++K + L +L DMYAKCG IE A +VF +L K++ +W
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N++I G A+HG + A +F +M+ GI+PDD+T + +L+ACS +G+++ G+ IF M +
Sbjct: 439 NAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQ 498
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
DYK+ P ++HYGC++DLL + L EA E+I NM MEP+ V+W SLL AC NVE
Sbjct: 499 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIR---GNVE 555
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
L E + LIK+EP N G YVL+SNIYA +W++ K+R L+ ++ + K PGCS IEI+
Sbjct: 556 LGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEID 615
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
VVHEF++GD HP + EIY MLE + + L +
Sbjct: 616 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/463 (31%), Positives = 246/463 (53%), Gaps = 47/463 (10%)
Query: 6 VPNSQLT-HFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTIS 64
VP+S HF S S + ++H L LL C L + +HAQ+IK N +
Sbjct: 10 VPSSSYPFHFLPS--SSDPPYDSLRNHPSLSLLHNCKTLQSLRLIHAQMIKTGLHN---T 64
Query: 65 DTQLAKLIESLVNSSQ---IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQ 121
+ L+KL+E V S + YA VF I P+ +NT+ RG+A + ++LY
Sbjct: 65 NYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVC 124
Query: 122 MIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVK-SKDFNSVIH------------ 165
MI GL P+S+T+P LLK+C ++ + +H V+K D + +H
Sbjct: 125 MISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGR 184
Query: 166 -----------------SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
S T LI Y + G ++SAQ LFD++ K+VV+W AMI+G+ +
Sbjct: 185 LEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAET 244
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
NY+E ++LF++M + + +E T+V+V+SACA G+ ELG+ VH +++ + N K+
Sbjct: 245 GNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIV 304
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+L D+Y+KCG +E A +F+ +L K+V +WN++IGG +EA+ +F +M SG +
Sbjct: 305 NSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGER 364
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY-GCLVDLLCRARLLDEAY 387
P+DVT++++L AC+H G I+ G+ I + + K N L+D+ + ++ A+
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAH 424
Query: 388 EVIRNMPMEP----NAVLWGSLLTACASADDGANVELAEIAME 426
+V ++ + NA+++G + A A + +I +E
Sbjct: 425 QVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIE 467
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 183/470 (38%), Positives = 294/470 (62%), Gaps = 11/470 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSS--QIAYAHLVFNQIINPSTFAFNTVIRG 105
++H IIK+S N +S L L+ S V ++ ++YA VF++I +P T A+NT+IR
Sbjct: 6 RLHCYIIKSSKQNDPLS---LRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRS 62
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIH 165
++ H ++ M NG+ D+FT+P +LKAC L+ +HSL+VK +S I
Sbjct: 63 HSRFFPSHSLFYFFS-MRSNGIPLDNFTFPFVLKACSRLQINLHLHSLIVK-YGLDSDIF 120
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR-DS 224
LI Y G ++ A +FD+M+E++ V+W+ +I + E +DLF KM+ +
Sbjct: 121 VQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLED 180
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
V +E+T++SV+SA ++LG ELG+WV F+ + + ++ LG AL DM+++CG I+E+
Sbjct: 181 KVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDES 240
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
+ VF+ + +NV TW ++I GL +HG EA+ MF M+ SG++PD VT VL ACSH
Sbjct: 241 IVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHG 300
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
GL+++G +IF ++R+ Y+++P + HYGC+VD+L RA LL+EAY+ + MPM+PN+++W +
Sbjct: 301 GLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRT 360
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL AC + + N+ LAE ++ K+ +G+ VL+SN+Y A +W + +R M+E
Sbjct: 361 LLGACVNHN---NLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMRE 417
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ I K PGCS I ++ +HEF+ GD HP SE+I L + LR Y
Sbjct: 418 KRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGY 467
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 175/382 (45%), Positives = 261/382 (68%), Gaps = 7/382 (1%)
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
+ L PD T L+ AC G+L + K +HS K + + ++ YC D++
Sbjct: 5 DNLRPDEVTMVSLVPACAQLGNLERGKLLHS-YSKELGLDENLSVNNAILDMYCKCDDIE 63
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
SAQ +F+++ EK+V++WT+M++G K ++E + LFRKM+ +E +E+TLV VLSACA
Sbjct: 64 SAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACA 123
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
GA + GK++H ++K I + L AL DMYAKCG I+ AL+VF+ + +NV TWN+
Sbjct: 124 QTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNA 183
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+IGGLA+HG GE+A+ +F QM+ + PDDVT IA+L ACSHAGL+++G +F M+ +
Sbjct: 184 MIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKF 243
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
++EP ++HYGC+VDLLCRAR +D+A I NMP++ N+VLW +LL AC S G + +LA
Sbjct: 244 QIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRS---GGHFDLA 300
Query: 422 EIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
E R+I+LEP + G YV++SN+YA +QWD A K+R+ MK + I K PGCS IE+N +
Sbjct: 301 EKIXRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGM 360
Query: 482 VHEFMVGDGRHPCSEEIYSMLE 503
+H+F+ GD H +E+IY+M+E
Sbjct: 361 IHQFVAGDRSHLQTEQIYAMIE 382
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 114/231 (49%), Gaps = 8/231 (3%)
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
I A VFN+I ++ +++ G A++G + L+ +M + ++PD T +L A
Sbjct: 62 IESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSA 121
Query: 141 C---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVT 197
C G L Q K +H L++ + N + T L+ Y G + A +F +M +NV T
Sbjct: 122 CAQTGALDQGKYIH-LLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFT 180
Query: 198 WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
W AMI G + + I LF +M + +++T +++L AC++ G + G + + +
Sbjct: 181 WNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAM- 239
Query: 258 KNCIILNDKLG--AALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGG 305
KN + ++ + D+ + +++AL + + ++ N W +++G
Sbjct: 240 KNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGA 290
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
++ ++PD+VT+++++ AC+ G +E+GK + ++ ++ ++ N+ ++D+ C+
Sbjct: 3 KLDNLRPDEVTMVSLVPACAQLGNLERGK-LLHSYSKELGLDENLSVNNAILDMYCKCDD 61
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE-LAEIAMERLIKLEPFNDGNYVL 441
++ A EV N E + + W S+L+ A + G E LA +L K+EP + +
Sbjct: 62 IESAQEVF-NRIREKDVLSWTSMLSGLAKS--GYFQESLALFRKMQLHKIEP----DEIT 114
Query: 442 MSNIYAAKAQWD--DAGKMRRLMKER 465
+ + +A AQ D GK L+ ++
Sbjct: 115 LVGVLSACAQTGALDQGKYIHLLIDK 140
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
L Q K +H I K + + +T L++ I A VF ++ + F +N +
Sbjct: 128 LDQGKYIHLLIDKFEINCDLVLET---ALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAM 184
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
I G A G G I L+ QM + L PD T+ LL AC
Sbjct: 185 IGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCAC 223
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 183/451 (40%), Positives = 282/451 (62%), Gaps = 36/451 (7%)
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG-------V 150
+N ++ GY + L+ +M G+ P+S T ++L AC L+ ++G +
Sbjct: 175 TWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYI 234
Query: 151 HSLVVKSKDF--------------------------NSVIHSLTRLITFYCNFGDVKSAQ 184
+ +V+ N + S T ++T + N G + A+
Sbjct: 235 NGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLAR 294
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
FDQ+ E++ V+WTAMI+G+++ + E + LFR+M+ S V+ +E T+VS+L+ACA+LG
Sbjct: 295 KYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLG 354
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
A ELG+WV +++KN I + +G AL DMY KCG + +A +VFK + K+ TW ++I
Sbjct: 355 ALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIV 414
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVE 364
GLAI+G GEEA+ MF M + I PD++T I VL AC+HAG++EKG+ F +M + ++
Sbjct: 415 GLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIK 474
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIA 424
PNV HYGC+VDLL RA L+EA+EVI NMP++PN+++WGSLL AC NV+LAE+A
Sbjct: 475 PNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHK---NVQLAEMA 531
Query: 425 MERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHE 484
+++++LEP N YVL+ NIYAA +W++ ++R+LM ER I K PGCS++E+N V+E
Sbjct: 532 AKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYE 591
Query: 485 FMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
F+ GD HP S+EIY+ LE + L + Y+
Sbjct: 592 FVAGDQSHPQSKEIYAKLENMMQDLIKAGYS 622
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 179/357 (50%), Gaps = 42/357 (11%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLV---NSSQIAYAHLVFNQ 90
+ LL+KC + Q KQ+H+ IK SD K + + S ++ YA VF+
Sbjct: 11 ISLLEKCKSMYQLKQIHSHTIKMGLS----SDPLFQKRVIAFCCAHESGKMIYARQVFDA 66
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQV 147
I P+ F +NT+I+GY+ G+ +Y M+ + + PD FT+P LLK L+
Sbjct: 67 IPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYG 126
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
K + + VK F+S + I + V A+ +FD VVTW M++G+ +
Sbjct: 127 KVLLNHAVK-HGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNR 185
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
K +++ LF +M GV N +TLV +LSAC+ L E GK +++++N + N L
Sbjct: 186 VKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLIL 245
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE-------------- 313
L DM+A CG ++EA VF + ++V +W SI+ G A G +
Sbjct: 246 ENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDY 305
Query: 314 -----------------EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
EA+ +F +MQMS +KPD+ T++++LTAC+H G +E G+ +
Sbjct: 306 VSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWV 362
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 6/280 (2%)
Query: 135 PI-LLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYC--NFGDVKSAQLLFDQMT 191
PI LL+ C + Q+K +HS +K + + R+I F C G + A+ +FD +
Sbjct: 10 PISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQ-KRVIAFCCAHESGKMIYARQVFDAIP 68
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+ + W MI G+ + + + G+ ++ M S ++ + T +L A + GK
Sbjct: 69 QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKV 128
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+ K+ N + A M++ C ++ A +VF + V TWN ++ G
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQ 188
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
+++ +F +M+ G+ P+ VTL+ +L+ACS +E GK I Y VE N+
Sbjct: 189 FKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHI-YKYINGGIVERNLILEN 247
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
L+D+ +DEA V NM + + W S++T A+
Sbjct: 248 VLIDMFAACGEMDEAQSVFDNMK-NRDVISWTSIVTGFAN 286
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 7/261 (2%)
Query: 55 KASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
++ FDN D ++ N QI A F+QI ++ +I GY
Sbjct: 263 QSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFI 322
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSL---TRL 170
+ L+ +M + + PD FT +L AC L ++ + V D NS+ + L
Sbjct: 323 EALALFREMQMSNVKPDEFTMVSILTACAHLGALE-LGEWVKTYIDKNSIKNDTFVGNAL 381
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNE 230
I Y G+V A+ +F +M K+ TWTAMI G + E + +F M ++ + +E
Sbjct: 382 IDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDE 441
Query: 231 LTLVSVLSACANLGASELGK-WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF- 288
+T + VL AC + G E G+ + ++ I N + D+ + G +EEA V
Sbjct: 442 ITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIV 501
Query: 289 KIVLEKNVCTWNSIIGGLAIH 309
+ ++ N W S++G +H
Sbjct: 502 NMPVKPNSIVWGSLLGACRVH 522
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 104/283 (36%), Gaps = 52/283 (18%)
Query: 24 SNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA--KLIESLVNSSQI 81
SN + +L C HL + + +K D +I + LI+ +
Sbjct: 334 SNVKPDEFTMVSILTACAHLGALEL--GEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNV 391
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
A VF ++ + F + +I G A G G + +++ MI + PD TY +L AC
Sbjct: 392 GKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCAC 451
Query: 142 GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-----EKNVV 196
H+ G V+ Q F MT + NV
Sbjct: 452 --------THA-------------------------GMVEKGQSFFISMTMQHGIKPNVT 478
Query: 197 TWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV 256
+ M++ + E ++ M V+ N + S+L AC +L E
Sbjct: 479 HYGCMVDLLGRAGRLEEAHEVIVNM---PVKPNSIVWGSLLGACRVHKNVQLA----EMA 531
Query: 257 NKNCIILNDKLGAA---LTDMYAKCGYIEEALRVFKIVLEKNV 296
K + L + GA L ++YA C E +V K+++E+ +
Sbjct: 532 AKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGI 574
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 190/502 (37%), Positives = 291/502 (57%), Gaps = 47/502 (9%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
+ KQ+ A ++ ++ +LI SL+ I YAH +F+ I P+ F +N +I+
Sbjct: 3 RLKQIQAYTLRNGIEHTK-------QLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQ 55
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVVKSKDFN 161
Y+ G H+ LYTQM G P+ ++ L AC L +Q + +H+ VKS F
Sbjct: 56 AYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKS-GFG 114
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMT------------------------------ 191
+ +LT L+ Y G + A+ FD+MT
Sbjct: 115 CDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLM 174
Query: 192 -EKNVVTWTAMINGHVKQKNYREGIDLFRKMRD-SGVEVNELTLVSVLSACANLGASELG 249
+NV +WTAMI+G+ + Y + + +F M + + + NE+TL SVL ACANLGA E+G
Sbjct: 175 PARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVG 234
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAI 308
+ + + N N + AL +MYA+CG I++A VF+ I +N+C+WNS+I GLA+
Sbjct: 235 ERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAV 294
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
HG +EA+++F++M G PDDVT + VL AC+H G++ +G+ F +M RD+ + P ++
Sbjct: 295 HGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLE 354
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HYGC+VDLL RA L EA+++I MPMEP++V+WG+LL AC+ +VELAE A L
Sbjct: 355 HYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFH---GHVELAEKAAGAL 411
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
+LEP N GNYV++SNIYA +WD ++R+LMK I K G S IE +H+F+V
Sbjct: 412 FELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVE 471
Query: 489 DGRHPCSEEIYSMLEYVAISLR 510
D H S+EIY++L+ V++ ++
Sbjct: 472 DRSHSRSDEIYALLDEVSMKMK 493
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 185/492 (37%), Positives = 285/492 (57%), Gaps = 17/492 (3%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFN 89
H H L+ + + + + HA+++ FD T+ D LI V+ + A +F+
Sbjct: 163 HVHTSLIHMYSQVGELR--HARLV---FDKSTLRDAVSFTALITGYVSEGHVDDARRLFD 217
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-- 147
+I ++N +I GY ++G + +T+M + P+ T +L ACG LR +
Sbjct: 218 EIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLEL 277
Query: 148 -KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
K + S V + + F + + L+ Y G++ +A+ LFD M +K+V+ W MI G+
Sbjct: 278 GKWIGSWV-RDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYC 336
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI----I 262
Y E + LF M V N++T ++VL ACA+LGA +LGKWVH +++KN +
Sbjct: 337 HLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNV 396
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
N L ++ MYAKCG +E A +VF+ + +++ +WN++I GLA++G E A+ +F +M
Sbjct: 397 NNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEM 456
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
G +PDD+T + VL+AC+ AG +E G F +M +DY + P ++HYGC++DLL R+
Sbjct: 457 INEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGK 516
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLM 442
DEA ++ NM MEP+ +WGSLL AC VE E ERL +LEP N G YVL+
Sbjct: 517 FDEAKVLMGNMEMEPDGAIWGSLLNACRIH---GQVEFGEYVAERLFELEPENSGAYVLL 573
Query: 443 SNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
SNIYA +WDD K+R + ++ + K PGC+ IEI+ VVHEF+VGD HP SE I+ ML
Sbjct: 574 SNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRML 633
Query: 503 EYVAISLREECY 514
+ V L E +
Sbjct: 634 DEVDRLLEETGF 645
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 223/420 (53%), Gaps = 40/420 (9%)
Query: 29 KSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF 88
++H HL LL KC + KQ+H+ IIK+ N + ++L + +L S ++YA +F
Sbjct: 24 ENHPHLNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFC-ALSPSRDLSYALSLF 82
Query: 89 NQIIN--PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR- 145
+ I + P+ F +NT+IR ++ + L++QM+ +GL P+S T+P L K+C +
Sbjct: 83 HSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKA 142
Query: 146 --QVKGVHSLVVK------SKDFNSVIH------------------------SLTRLITF 173
+ K +H+ +K S+IH S T LIT
Sbjct: 143 THEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITG 202
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y + G V A+ LFD++ K+VV+W AMI G+V+ + E + F +M+++ V N+ T+
Sbjct: 203 YVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTM 262
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
VSVLSAC +L + ELGKW+ +V N +L AL DMY+KCG I A ++F + +
Sbjct: 263 VSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMED 322
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K+V WN++IGG EEA+ +F M + P+DVT +AVL AC+ G ++ GK +
Sbjct: 323 KDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWV 382
Query: 354 FYNMRRDYKVEPNVKH---YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ ++ K NV + + ++ + + ++ A +V R+M A W ++++ A
Sbjct: 383 HAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLAS-WNAMISGLA 441
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 193/500 (38%), Positives = 300/500 (60%), Gaps = 14/500 (2%)
Query: 25 NTATKSHHHLPLLQKCTHLVQFKQVHAQIIKAS-FDNRTISDTQLAKLIESLVNSSQIAY 83
N K +L L++KC L +FKQVH QI+K F + S + LA S NS + Y
Sbjct: 27 NLKQKEQEYLCLVKKCKSLEEFKQVHVQILKFGLFLDSFCSSSVLATCALSDWNS--MDY 84
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A +F Q+ P+TF FNT+IRGY I LY M+ ++PD+FTYP++LKAC
Sbjct: 85 ACSIFQQLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACAR 144
Query: 144 LRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
L ++ +H V K ++ LI Y D++ + +F +M +K+V +W+A
Sbjct: 145 LAVIQEGMQIHGHVFK-LGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSA 203
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGV-EVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
+I H + E + LF M G E LV+VLSAC +LGA LG+ H + KN
Sbjct: 204 IIAAHASLAMWWECLALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKN 263
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
LN + +L DMY KCG +++ L +F+ + KN +++ II GL +HG G +A+++F
Sbjct: 264 ITELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIF 323
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
+M G++PDDVT ++VL+ACSH+GL+++G ++F M+ +Y++EP ++HYGC+VDL R
Sbjct: 324 SEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGR 383
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
A LL+EA++++++MP++ N VLW SLL+AC D N++L EIA E L +L N +Y
Sbjct: 384 AGLLEEAFQLVQSMPIKANDVLWRSLLSACKVHD---NLKLGEIAAENLFRLSSHNPSDY 440
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
+++SN+YA QW++A K+R M R +++ PG S++E+ V++F+ D + S IY
Sbjct: 441 LVLSNMYARAQQWENAAKIRTKMINRGLIQTPGYSLVEVKSKVYKFVSQDKSYCKSGNIY 500
Query: 500 SMLEYVAISLREECYAARMP 519
M+ + LR E Y MP
Sbjct: 501 KMIHQMEWQLRFEGY---MP 517
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 175/448 (39%), Positives = 277/448 (61%), Gaps = 10/448 (2%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD + D LI+ ++ I A +F++I ++N +I GYAE G +
Sbjct: 161 FDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEAL 220
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITF 173
+L+ +M+ + PD T +L AC + + VHS + F S + + LI
Sbjct: 221 ELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWI-DDHGFGSNLKIVNALIDL 279
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y G+V++A LF+ ++ K+V++W +I G+ Y+E + LF++M SG NE+T+
Sbjct: 280 YIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTM 339
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILND--KLGAALTDMYAKCGYIEEALRVFKIV 291
+S+L ACA+LGA ++G+W+H +++K +++ L +L DMYAKCG IE A +VF +
Sbjct: 340 LSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM 399
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
L +++ +WN++I G A+HG A +F +M+ GI+PDD+T + +L+ACSH+G+++ G+
Sbjct: 400 LNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGR 459
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
IF +M DYK+ P ++HYGC++DLL + L EA E+I +M M+P+ V+W SLL AC
Sbjct: 460 HIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKM 519
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
NVEL E + LIK+EP N G+YVL+SNIYA +W++ K R L+ ++ + K P
Sbjct: 520 H---GNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVP 576
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIY 499
GCS IEI+ VVHEF++GD HP + EIY
Sbjct: 577 GCSSIEIDSVVHEFIIGDKLHPRNREIY 604
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 217/402 (53%), Gaps = 40/402 (9%)
Query: 29 KSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ---IAYAH 85
++H L LL C L + +HA++IK N ++ L+KLIE V S + YA
Sbjct: 1 RNHPSLSLLHNCKTLQSLRIIHAKMIKTGLHN---TNYALSKLIEFSVLSPHFDGLTYAI 57
Query: 86 LVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD-- 143
VF+ I P+ +NT+ RG+A + + LY MI GL P+S+T+P LLKAC
Sbjct: 58 SVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSK 117
Query: 144 -LRQVKGVHSLVVK--------------------------SKDFNSVIH----SLTRLIT 172
R+ + +H V+K K F+ H S T LI
Sbjct: 118 AFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIK 177
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
Y + G + SAQ +FD++ K+VV+W A+I+G+ + NY+E ++LF++M + V+ +E T
Sbjct: 178 GYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDEST 237
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
+V+VLSACA + ELG+ VH +++ + N K+ AL D+Y KCG +E A +F+ +
Sbjct: 238 MVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLS 297
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
K+V +WN++IGG +EA+ +F +M SG P++VT++++L AC+H G I+ G+
Sbjct: 298 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRW 357
Query: 353 IFYNMRRDYKVEPNVKHY-GCLVDLLCRARLLDEAYEVIRNM 393
I + + K N L+D+ + ++ A +V +M
Sbjct: 358 IHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM 399
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 195/525 (37%), Positives = 317/525 (60%), Gaps = 30/525 (5%)
Query: 3 KQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRT 62
++ P QL +A + + A H + L+++C L+ + HA + + R
Sbjct: 44 RERTPRMQLLKPKEAATLPREALEA----HIVSLVRRCPGLLALRSAHAHLTRLRLP-RL 98
Query: 63 ISDTQLAKLIESLVNSSQIAYAHL--------VFNQIINPSTFAFNTVIRGYAEAGLGHR 114
+ L+KL+ S V++ A A +F+QI +P+ F +N++IR AG
Sbjct: 99 TAAFALSKLLASCVSAPAPAAAQAAASSYARNLFDQIPDPTAFCYNSLIRALPAAGSAP- 157
Query: 115 GIQLYTQMIGNGLD-PDSFTYPILLKAC------GDLRQVKGVHSLVVKSKDFNSVIHSL 167
+ +Y +M+ G P+SFT LKAC G+ RQ+ H+ ++ + + +
Sbjct: 158 ALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQL---HAQALR-QGLATSAYVQ 213
Query: 168 TRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
T L+ Y V A+ +FD M +KN+V W+AM++G+ + E + LFR+M+ GV
Sbjct: 214 TGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGV 273
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
E +E+T+VSV+SACA GA +LGKWVH ++++ I ++ +L AL DMYAKCG IE A
Sbjct: 274 EPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARG 333
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF ++EK+ W+++I G AIHG E+A+ +F +M ++P++VT I VL+AC+H+GL
Sbjct: 334 VFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGL 393
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+E G+ ++++ ++ ++P++++YGC+VDLLCR+ LLD+AY + MP+ PN+V+W +LL
Sbjct: 394 VEDGRR-YWSIMQNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLL 452
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
AC S++ +++AE A +RL++LEP N NYVL+SN+YA+ +QWD +RR MK +N
Sbjct: 453 VACKSSN---RIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKN 509
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
+ G S IEIN +HEF+V D HP EI +L +A +R
Sbjct: 510 VTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRR 554
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 181/476 (38%), Positives = 294/476 (61%), Gaps = 13/476 (2%)
Query: 46 FKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
+Q+HA I+ + + L+K++ +L I YA VF QI +P+ F++N++I
Sbjct: 4 LRQLHAHILTRPLPLSSFA-FALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNSLI 62
Query: 104 RGYAEA-GLGHRGIQLYTQMIGNGLD-PDSFTYPILLKACGDLRQVK---GVHSLVVKSK 158
+GY++ L I L+ ++ G P+SFT +LKAC + VHS V+K
Sbjct: 63 KGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKD- 121
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
F S + T L+ FY ++ A+ +F++M +N+V WTAMI+GH + E ++LF
Sbjct: 122 GFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELF 181
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
R+M+ +G++ + +TLVSV+SACA GA ++G W+H ++ K ++ + +L AL DMYAKC
Sbjct: 182 REMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMYAKC 241
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G IE A +VF + K+ W+S+I G A HG ++A+ F QM + + PD VT +AVL
Sbjct: 242 GCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVL 301
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
+AC+H GL+ +G+ F+++ ++ +EP+V+HYGC VDLLCR+ L++EAY + M + PN
Sbjct: 302 SACAHGGLVSRGRR-FWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPN 360
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
A W SLL C + L EI L++LEP N NY+++SN+Y++ +QW+ ++
Sbjct: 361 AATWRSLLMGCKKKK---LLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSEL 417
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
R++MKE+ I PGCS IE++ VVHEF++GD HP + + +E +++ +R+ Y
Sbjct: 418 RKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVRDSGY 473
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 189/524 (36%), Positives = 298/524 (56%), Gaps = 46/524 (8%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQ-IIKASFDNRTISDTQLAKLIESLV--NSSQIAYAHLV 87
H + L+ L + KQ+H Q +I +NR + L + + S+ N + + Y++ +
Sbjct: 10 HPTIALIDSFITLKELKQIHTQLVINGLLNNREL----LGQFVASIAVRNPTNLLYSNQI 65
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG--LDPDSFTYPILLKACGDLR 145
+Q P+ FA N++IR Y+++ H+ Q Y +++ + + PD++T+ L++ C
Sbjct: 66 LDQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQSA 125
Query: 146 QVKG--VHSLVVKSKDFNSVIHSLTRLITFYCNF-------------------------- 177
G VH ++K F H + LI Y
Sbjct: 126 CEAGPAVHGALIK-HGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVS 184
Query: 178 -----GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
GD+ A+ LFD M +++ V+W AMI G+ ++ RE ++LF+ M+ GV+VNE++
Sbjct: 185 ACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVS 244
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
++SV++AC +LGA + GKW H ++ KN I + LG AL DMY KCG ++ AL+VF +
Sbjct: 245 MISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMN 304
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
EKNV TW++ IGGLA++G G++ +++F M+ GI P+++T I+VL CS G +++G+
Sbjct: 305 EKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRS 364
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
F +M+RD+ +EP ++HYGC+VDL RA L+EA I MP++P+A WG+LL AC
Sbjct: 365 HFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMY 424
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
N+EL E A +LI++E N G YV +SNIYA WD +R+ MK I K PG
Sbjct: 425 K---NMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPG 481
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
CSV+E+N VHEF GD HP + I +M ++ L+ Y A
Sbjct: 482 CSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVA 525
>gi|225437286|ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 468
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/449 (41%), Positives = 271/449 (60%), Gaps = 11/449 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LL C Q+ AQ+I + + T T I + + + A L+F
Sbjct: 15 LNLLTNCCSPCHIHQIQAQLIVQNLHSNT---TIAHHFITACQSLGLLDSALLLFTHHSK 71
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGV 150
P F N++IR ++ H +YT M N + P++FT+P LLK+ D + + + +
Sbjct: 72 PHVFICNSLIRAFSHNHTPHTPFSIYTHMHSNSILPNNFTFPFLLKSLADFKGLSEGQCI 131
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H+ VVK F+ I+ L+ Y + GD+ +FD+M ++VV+WT +I G+ +
Sbjct: 132 HTHVVKLGQFDD-IYVQNSLLNVYASCGDMGLCMRVFDEMPHRDVVSWTVLITGYRSAER 190
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
Y + + F +M+ +GV N +T+V+ LSACA+ GA E+G W+HEF+ ++ + LG +
Sbjct: 191 YDDALIAFEQMQYAGVVPNHVTMVNALSACADFGALEMGVWIHEFIRRSGWEFDVILGTS 250
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMY KCG IEE L VF+ + EKNV TWNS+I GLA+ G EAV F++M+ GIK D
Sbjct: 251 LIDMYGKCGRIEEGLVVFRSMKEKNVFTWNSLIKGLALARSGAEAVWWFYRMEQEGIKAD 310
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+VTLIAVL ACSH+G+++ G++IF + M Y+ P VKHY C++DLL RA +L EA EV
Sbjct: 311 EVTLIAVLCACSHSGMVQMGRQIFGSLMNGKYEFFPGVKHYACVIDLLARAGILQEAMEV 370
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
+ MP EPN V+WG+ L C + D +EL+E A +L++LEP N YVL+SNIYA
Sbjct: 371 MTRMPFEPNKVMWGAFLAGCRAHGD---LELSEFAARKLVELEPGNGAYYVLLSNIYAEM 427
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
+W D K+RRLMKE + K+ GCS IE+
Sbjct: 428 GRWSDVEKVRRLMKEGGLTKDLGCSSIEL 456
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/540 (36%), Positives = 300/540 (55%), Gaps = 76/540 (14%)
Query: 38 QKCTHLVQFKQVHAQIIKAS-FDNRTISDTQLAKLIESLVNS--SQIAYAHLVFNQIINP 94
+ T L Q+HA ++++ F + +S L++ N S +A VF+ I NP
Sbjct: 41 KSITSLQYLTQLHALVLRSGHFQDHYVS----GALLKCYANPHFSNFDFALKVFSSIPNP 96
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVH 151
+ F +N VI+G E + I Y +M+ + P+ FTYP L KAC + V + +H
Sbjct: 97 NVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIH 155
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGD------------------------------VK 181
VVK S +H + I Y +FG ++
Sbjct: 156 GHVVK-HGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLE 214
Query: 182 SAQLLFDQMTEKNV-------------------------------VTWTAMINGHVKQKN 210
+A+ LF QM KN+ ++W++M++G++
Sbjct: 215 AAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGR 274
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
Y+E +++F++M+ L SVL+AC+N+GA + G+WVH ++ +N I L+ LG A
Sbjct: 275 YKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTA 334
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMYAKCG ++ VF+ + E+ + TWN++IGGLAIHG E+A+++F ++Q +KP+
Sbjct: 335 LLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPN 394
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+TL+ VLTAC+HAG ++KG IF MR Y V+P ++HYGC+VDLL R+ L EA ++I
Sbjct: 395 GITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLI 454
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+MPM+PNA +WG+LL AC N +LAE + L++LEP N G YVL+SNIYA
Sbjct: 455 NSMPMKPNAAVWGALLGACRIH---GNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVG 511
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
++DD K+R+LMK R I PG S++++N VHEF +GDG HP +EIY L+ + L+
Sbjct: 512 RFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQ 571
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/511 (35%), Positives = 292/511 (57%), Gaps = 35/511 (6%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L+ K + Q+HA +++ + I + +L + +L ++ + VFN P+
Sbjct: 53 LIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAAL---GRLDCSVFVFNTFDEPN 109
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-------------- 141
F+F+ +I + ++ L R Y+QM+ G++P++FT+ +LK+C
Sbjct: 110 VFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIK 169
Query: 142 ----GDLRQVKGVHSLVVKSKD-------FNSV----IHSLTRLITFYCNFGDVKSAQLL 186
DL G+ + + D F+ + + SLT ++T Y G++ A+ L
Sbjct: 170 LGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSL 229
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
F+ M E++VV W MI G+ + E + LFR+M + NE+T+++VLSAC LGA
Sbjct: 230 FEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGAL 289
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
E G+W+H ++ I +N +G AL DMY+KCG +E+A VF + +K+V WNS+I G
Sbjct: 290 ESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGY 349
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
A+HG + A+++F +M +G KP D+T I +L+AC H GL+E+G+ F MR Y +EP
Sbjct: 350 AMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPK 409
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
++HYGC+V+LL RA L+EAY +++NM + + VLWG+LL C N++L E +
Sbjct: 410 IEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLH---VNIKLGEEIAK 466
Query: 427 RLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFM 486
L+ + N G YVL+SN+YAA W+ KMR LMKE I K GCS IE+++ VHEF+
Sbjct: 467 FLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFV 526
Query: 487 VGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
G+ +HP S+EIY ML + L+ Y +
Sbjct: 527 AGERKHPKSKEIYVMLNEINSWLKARGYTPQ 557
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/448 (39%), Positives = 276/448 (61%), Gaps = 10/448 (2%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD + D LI + IA A +F++I ++N +I GYAE G +
Sbjct: 161 FDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEAL 220
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITF 173
+L+ +M+ + PD T ++ AC + + VHS + F S + + LI
Sbjct: 221 ELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWI-DDHGFGSNLKIVNALIDL 279
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y G+V++A LF+ ++ K+V++W +I G+ Y+E + LF++M SG N++T+
Sbjct: 280 YIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTM 339
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLG--AALTDMYAKCGYIEEALRVFKIV 291
+S+L ACA+LGA E+G+W+H ++NK + + +L DMYAKCG IE A +VF +
Sbjct: 340 LSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI 399
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
L +++ +WN++I G A+HG A +F +M+ + I+PDD+T + +L+ACSH+G+++ G+
Sbjct: 400 LNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGR 459
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
IF +M+ DYK+ P ++HYGC++DLL + L EA E+I M MEP+ V+W SLL AC
Sbjct: 460 HIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKM 519
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
ANVEL E + LIK+EP N G+YVL+SNIYA +W++ K+R L+ ++ + K P
Sbjct: 520 Y---ANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVP 576
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIY 499
GCS IEI+ VVHEF++GD HP + EIY
Sbjct: 577 GCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/473 (31%), Positives = 243/473 (51%), Gaps = 43/473 (9%)
Query: 29 KSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ---IAYAH 85
++H L LL C L + +HAQ+IK N ++ L+KLIE V S + YA
Sbjct: 1 RNHPSLSLLHNCKTLQSLRMIHAQMIKTGLHN---TNYALSKLIEFCVLSPHFDGLPYAI 57
Query: 86 LVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD-- 143
VF I P+ +NT+ RG+A + + LY MI GL P+ +T+P LLK+C
Sbjct: 58 SVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSK 117
Query: 144 -LRQVKGVHSLVVK-SKDFNSVIH-----------------------------SLTRLIT 172
R+ + +H V+K D + +H S T LIT
Sbjct: 118 AFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIT 177
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
Y + G + SAQ +FD++ K+VV+W AMI+G+ + N +E ++LF++M + V +E T
Sbjct: 178 GYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDEST 237
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
+VSV+SACA + ELG+ VH +++ + N K+ AL D+Y KCG +E A +F+ +
Sbjct: 238 MVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLS 297
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
K+V +WN++IGG +EA+ +F +M SG P+DVT++++L AC+H G IE G+
Sbjct: 298 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRW 357
Query: 353 IFYNMRRDYKVEPNV-KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
I + + K N H L+D+ + ++ A +V ++ + + W +++ A
Sbjct: 358 IHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFA- 415
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
AN + R ++EP +D +V + + + D + R MKE
Sbjct: 416 MHGRANAAFDIFSRMRKNEIEP-DDITFVGLLSACSHSGMLDLGRHIFRSMKE 467
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/447 (38%), Positives = 273/447 (61%), Gaps = 7/447 (1%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI+ V +AYA VF+ + S ++ +I Y + G++L+ +M+G G+ P+
Sbjct: 268 LIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPN 327
Query: 131 SFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T L+K CG L K +H+ +++ S++ + T I Y GDV+SA+ +F
Sbjct: 328 EITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLA-TAFIDMYGKCGDVRSARSVF 386
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
D K+++ W+AMI+ + + E D+F M G+ NE T+VS+L CA G+ E
Sbjct: 387 DSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLE 446
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
+GKW+H +++K I + L + DMYA CG I+ A R+F ++++ WN++I G A
Sbjct: 447 MGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFA 506
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
+HG GE A+++F +M+ G+ P+D+T I L ACSH+GL+++GK +F+ M ++ P V
Sbjct: 507 MHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKV 566
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+HYGC+VDLL RA LLDEA+E+I++MPM PN ++GS L AC N++L E A ++
Sbjct: 567 EHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHK---NIKLGEWAAKQ 623
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
+ LEP G VLMSNIYA+ +W D +RR MK+ IVK PG S IE+N ++HEF++
Sbjct: 624 FLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIM 683
Query: 488 GDGRHPCSEEIYSMLEYVAISLREECY 514
GD HP ++++Y M++ + L + Y
Sbjct: 684 GDREHPDAKKVYEMIDEMREKLEDAGY 710
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 202/403 (50%), Gaps = 18/403 (4%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L+ C + F ++VH ++K F L + + +A A L+F++I
Sbjct: 130 VLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEV---GSLALARLLFDKIE 186
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD-----SFTYPILLKACGDLRQV 147
N +++T+IR Y +GL + L M + P S T+ +L DL+
Sbjct: 187 NKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITH--VLAELADLKLG 244
Query: 148 KGVHSLVVKS-KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
K +H+ V+++ K S + T LI Y ++ A+ +FD +++ ++++WTAMI ++
Sbjct: 245 KAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYI 304
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
N EG+ LF KM G+ NE+T++S++ C GA ELGK +H F +N L+
Sbjct: 305 HCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLV 364
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
L A DMY KCG + A VF K++ W+++I A + C +EA +F M G
Sbjct: 365 LATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCG 424
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
I+P++ T++++L C+ AG +E GK I + + ++ ++ VD+ +D A
Sbjct: 425 IRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQ-GIKGDMILKTSFVDMYANCGDIDTA 483
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDG-ANVELAEIAMERL 428
+ + + + +W ++++ A G A +EL E ME L
Sbjct: 484 HRLFAE-ATDRDISMWNAMISGFAMHGHGEAALELFE-EMEAL 524
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 194/438 (44%), Gaps = 61/438 (13%)
Query: 15 TNSANSHKNSNTATKSHHHLPLLQKCTH--LVQFKQVHAQIIKASFDNRTISDTQLAKLI 72
TN +S T ++ ++P +Q+ H L + +Q+H IK S S+ +
Sbjct: 26 TNQYHSPTLKFTQSQPKPNVPHIQQELHINLNETQQLHGHFIKTS------SNCSYRVPL 79
Query: 73 ESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSF 132
+L + S A H +F + I+ A ++Y M G + D+F
Sbjct: 80 AALESYSSNAAIH----------SFLITSYIKNNCPAD----AAKIYAYMRGTDTEVDNF 125
Query: 133 TYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
P +LKAC + + VH VVK+ F+ + LI Y G + A+LLFD+
Sbjct: 126 VIPSVLKACCLIPSFLLGQEVHGFVVKN-GFHGDVFVCNALIMMYSEVGSLALARLLFDK 184
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
+ K+VV+W+ MI + + E +DL R M V+ +E+ ++S+ A L +LG
Sbjct: 185 IENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLG 244
Query: 250 KWVHEFVNKN--CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
K +H +V +N C L AL DMY KC + A RVF + + ++ +W ++I
Sbjct: 245 KAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYI 304
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKV--- 363
E V++F +M G+ P+++T+++++ C AG +E GK + + +R + +
Sbjct: 305 HCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLV 364
Query: 364 --------------------------EPNVKHYGCLVDLLCRARLLDEAYEVIRNMP--- 394
++ + ++ + +DEA+++ +M
Sbjct: 365 LATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCG 424
Query: 395 MEPNAVLWGSLLTACASA 412
+ PN SLL CA A
Sbjct: 425 IRPNERTMVSLLMICAKA 442
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 107/229 (46%), Gaps = 5/229 (2%)
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
N + +I ++K + ++ MR + EV+ + SVL AC + + LG+ VH
Sbjct: 88 NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVH 147
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
FV KN + + AL MY++ G + A +F + K+V +W+++I G +
Sbjct: 148 GFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLD 207
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGC 372
EA+ + M + +KP ++ +I++ + ++ GK + Y MR + V
Sbjct: 208 EALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTA 267
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA---CASADDGANV 418
L+D+ + L A V + + + + W +++ A C + ++G +
Sbjct: 268 LIDMYVKCENLAYARRVFDGLS-KASIISWTAMIAAYIHCNNLNEGVRL 315
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/496 (38%), Positives = 307/496 (61%), Gaps = 26/496 (5%)
Query: 32 HHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL----- 86
H + L+++C L+ + HA + + R + L+KL+ S V++ A A
Sbjct: 20 HIVSLVRRCPGLLALRSAHAHLTRLRLP-RLTAAFALSKLLASCVSAPAPAAAQAAASSY 78
Query: 87 ---VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD-PDSFTYPILLKAC- 141
+F+QI +P+ F +N++IR AG + +Y +M+ G P+SFT LKAC
Sbjct: 79 ARNLFDQIPDPTAFCYNSLIRALPAAG-SAPALAVYRRMLRAGSPRPNSFTLAFALKACA 137
Query: 142 -----GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKNV 195
G+ RQ+ H+ ++ + + + T L+ Y V A+ +FD M +KN+
Sbjct: 138 AVPAPGEGRQL---HAQALR-QGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNL 193
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V W+AM++G+ + E + LFR+M+ GVE +E+T+VSV+SACA GA +LGKWVH +
Sbjct: 194 VAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAY 253
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
+++ I ++ +L AL DMYAKCG IE A VF ++EK+ W+++I G AIHG E+A
Sbjct: 254 IDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDA 313
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
+ +F +M ++P++VT I VL+AC+H+GL+E G+ ++++ ++ ++P++++YGC+VD
Sbjct: 314 LGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRR-YWSIMQNLGIKPSMENYGCMVD 372
Query: 376 LLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN 435
LLCR+ LLD+AY + MP+ PN+V+W +LL AC S++ +++AE A +RL++LEP N
Sbjct: 373 LLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSN---RIDIAESATKRLLELEPHN 429
Query: 436 DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
NYVL+SN+YA+ +QWD +RR MK +N+ G S IEIN +HEF+V D HP
Sbjct: 430 PENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEI 489
Query: 496 EEIYSMLEYVAISLRE 511
EI +L +A +R
Sbjct: 490 REIRLVLREMADRVRR 505
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/470 (39%), Positives = 291/470 (61%), Gaps = 11/470 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSS--QIAYAHLVFNQIINPSTFAFNTVIRG 105
++H IIK+S N +S L L+ S V ++ ++YA VF++I +P T A+NT+IR
Sbjct: 6 RLHCYIIKSSKQNDPLS---LRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRS 62
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIH 165
++ H + + M NG+ D+FT+P +LKAC L+ +HSL+VK S I
Sbjct: 63 HSRFFPSH-SLSYFFSMRSNGIPLDNFTFPFVLKACSRLQINLHLHSLIVK-YGLGSDIF 120
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR-DS 224
LI Y G ++ A +FD+M+E++ V+W+ +I + E +DLF KM+ +
Sbjct: 121 VQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLED 180
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
V +E+T++SV+SA ++LG ELG+WV F+ + ++ LG AL DM+++CG I+E+
Sbjct: 181 KVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDES 240
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
+ VF+ + +NV TW ++I GL IHG EA+ MF M+ SG++PD VT VL ACSH
Sbjct: 241 IVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHG 300
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
GL+++G +IF ++R+ Y ++P + HYGC+VD+L RA LL+EAY+ + MPM+PN+++W +
Sbjct: 301 GLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRT 360
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL AC + + N+ LAE ++ K+ +G+ VL+SN+Y A +W + +R M+E
Sbjct: 361 LLGACVNHN---NLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMRE 417
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ I K PGCS I ++ +HEF+ GD HP SE+I L + LR Y
Sbjct: 418 KRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGY 467
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/500 (37%), Positives = 289/500 (57%), Gaps = 40/500 (8%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQL------------------------ 68
LL+ C F +Q+H Q++K FD T L
Sbjct: 70 LLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRD 129
Query: 69 ----AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
LI + I A +F++I ++N +I GYAE G ++L+ +M+
Sbjct: 130 VVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMK 189
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
+ PD TY +L AC G + + VHS V F+S + + LI Y G+V+
Sbjct: 190 MNVRPDESTYVTVLSACAHSGSIELGRQVHSW-VDDHGFDSNLKIVNALIDLYSKCGEVE 248
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
+A LF ++ K+V++W +I G+ Y+E + LF++M SG N++T++SVL ACA
Sbjct: 249 TACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACA 308
Query: 242 NLGASELGKWVHEFVNKNC--IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
+LGA ++G+W+H +++K + L +L DMYAKCG IE A +VF +L K++ +W
Sbjct: 309 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSW 368
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N++I G A+HG + + +F +M+ GI+PDD+T + +L+ACSH+G+++ G+ IF +M +
Sbjct: 369 NAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQ 428
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
DYK+ P ++HYGC++DLL + L EA E+I M MEP+ V+W SLL AC NVE
Sbjct: 429 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMH---GNVE 485
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
LAE + LIK+EP N +Y+L+SNIYA+ +W+D ++R L+ + + K PGCS IE++
Sbjct: 486 LAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVD 545
Query: 480 DVVHEFMVGDGRHPCSEEIY 499
VV EF+VGD HP + EIY
Sbjct: 546 SVVFEFVVGDKFHPQNREIY 565
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 211/400 (52%), Gaps = 39/400 (9%)
Query: 71 LIESLVNSSQ---IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL 127
LIE V S + YA VF I P+ +NT+IRG+A + + LY M+ GL
Sbjct: 1 LIELCVPSPHFDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGL 60
Query: 128 DPDSFTYPILLKACGD---LRQVKGVHSLVVK-SKDFNSVIH------------------ 165
P+S+T+P LLK+C + + +H V+K D + +H
Sbjct: 61 LPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYK 120
Query: 166 -----------SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG 214
S T LIT Y + GD++SAQ LFD++ K+VV+W AMI+G+ + Y+E
Sbjct: 121 VFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEA 180
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
++LF +M V +E T V+VLSACA+ G+ ELG+ VH +V+ + N K+ AL D+
Sbjct: 181 LELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDL 240
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y+KCG +E A +F+ + K+V +WN++IGG +EA+ +F +M SG P+DVT+
Sbjct: 241 YSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 300
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY-GCLVDLLCRARLLDEAYEVIRNM 393
++VL AC+H G I+ G+ I + + K N L+D+ + ++ A++V +M
Sbjct: 301 LSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 360
Query: 394 PMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
+ + W +++ A A+ + R I +EP
Sbjct: 361 -LHKSLSSWNAMIFGFA-MHGRADASFDLFSRMRKIGIEP 398
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 192/521 (36%), Positives = 298/521 (57%), Gaps = 44/521 (8%)
Query: 17 SANSHKNSNTATKSHHHL------PLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK 70
S H NSN+ KS L LLQ+ H+ Q +HAQ+I+ + + + +
Sbjct: 30 SPKPHPNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIR---NGHSQDPFMVFE 86
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
L+ S I YA +F NP+ + + +I G+ +G IQLY++M+ + + PD
Sbjct: 87 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPD 146
Query: 131 SFTYPILLKACGD---LRQVKGVHSLVVKSK----------------------DFNSVIH 165
++ +LKACG LR+ + VHS +K D V
Sbjct: 147 NYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFE 206
Query: 166 SL-------TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
+ T +I+ Y + G V+ A +F ++ K+ V WTAMI+G V+ + ++ F
Sbjct: 207 EMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAF 266
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
R M+ V NE T+V VLSAC+ LGA E+G+WVH ++ K I LN +G AL +MY++C
Sbjct: 267 RGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRC 326
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G I+EA VF + +++V T+N++I GL+++G +A+++F M ++P +VT + VL
Sbjct: 327 GSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVL 386
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
ACSH GL++ G +IF++M RDY VEP ++HYGC+VDLL R L+EAY++IR M M P+
Sbjct: 387 NACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPD 446
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
++ G+LL+AC N+EL E + L + G YVL+S++YA+ +W +A ++
Sbjct: 447 HIMLGTLLSACKMHK---NLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQV 503
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
R MKE + K PGCS IE+N+ +HEF++GD RHP E IY
Sbjct: 504 RAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIY 544
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/471 (38%), Positives = 284/471 (60%), Gaps = 8/471 (1%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K +HA +I+ S +N + L++ + A +FN + + ++ +I G
Sbjct: 215 KAMHAYVIRNS-NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSV 163
+ G +L+ +M + P+ T L+ CG L+ K +H+ ++++ F+
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRN-GFSVS 332
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ T L+ Y D+++A+ LFD ++V+ WTAM++ + + + +LF +MR
Sbjct: 333 LALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRT 392
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
SGV ++T+VS+LS CA GA +LGKWVH +++K + ++ L AL DMYAKCG I
Sbjct: 393 SGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINA 452
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A R+F + +++C WN+II G A+HG GEEA+ +F +M+ G+KP+D+T I +L ACSH
Sbjct: 453 AGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSH 512
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
AGL+ +GK++F M + + P ++HYGC+VDLL RA LLDEA+E+I++MP++PN ++WG
Sbjct: 513 AGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWG 572
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+L+ AC N +L E+A +L+++EP N G VLMSNIYAA +W DA +R+ MK
Sbjct: 573 ALVAACRLHK---NPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMK 629
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ K PG SVIE+N VHEF++GD HP I ML + L E Y
Sbjct: 630 TVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGY 680
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 188/368 (51%), Gaps = 9/368 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K++H ++K D L + + + YA LVF++++ +++T+IR
Sbjct: 114 KEIHGFVLKKGLDRDVFVGNALMLMYGE---CACVEYARLVFDKMMERDVVSWSTMIRSL 170
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVK-SKDFNS 162
+ ++L +M + P ++ D +R K +H+ V++ S + +
Sbjct: 171 SRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHM 230
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ + T L+ Y G + A+ LF+ +T+K VV+WTAMI G ++ EG LF +M+
Sbjct: 231 GVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQ 290
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ + NE+T++S++ C GA +LGK +H ++ +N ++ L AL DMY KC I
Sbjct: 291 EENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIR 350
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A +F ++V W +++ A C ++A +F QM+ SG++P VT++++L+ C+
Sbjct: 351 NARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCA 410
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
AG ++ GK + + ++ +VE + LVD+ + ++ A + + + +W
Sbjct: 411 VAGALDLGKWVHSYIDKE-RVEVDCILNTALVDMYAKCGDINAAGRLFIE-AISRDICMW 468
Query: 403 GSLLTACA 410
+++T A
Sbjct: 469 NAIITGFA 476
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 156/291 (53%), Gaps = 14/291 (4%)
Query: 131 SFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
+F P +LKACG + K +H V+K K + + L+ Y V+ A+L+F
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLK-KGLDRDVFVGNALMLMYGECACVEYARLVF 152
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
D+M E++VV+W+ MI + K + ++L R+M V +E+ +VS+++ A+
Sbjct: 153 DKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMR 212
Query: 248 LGKWVHEFVNKNCIILNDKLG----AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
+GK +H +V +N N+ +G AL DMYAKCG++ A ++F + +K V +W ++I
Sbjct: 213 MGKAMHAYVIRNSN--NEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMI 270
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYK 362
G EE K+F +MQ I P+++T+++++ C G ++ GK++ Y +R +
Sbjct: 271 AGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFS 330
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
V ++ LVD+ + + A + + + ++W ++L+A A A+
Sbjct: 331 V--SLALATALVDMYGKCSDIRNA-RALFDSTQNRDVMIWTAMLSAYAQAN 378
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 188/515 (36%), Positives = 297/515 (57%), Gaps = 9/515 (1%)
Query: 8 NSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQ 67
S L NS N L LL++C + +FKQVHA I+K + +
Sbjct: 9 QSHLLSLPNSPPQSSELNAKFNEQGWLSLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSN 68
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL 127
L +L + YA +F+QI P +F +NT+IRG + + LY +M+ G+
Sbjct: 69 LVASC-ALSRWGSMEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGI 127
Query: 128 DPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQ 184
+PD+FTYP +LKAC L +K +H+ V K+ + LI+ Y G ++ A
Sbjct: 128 EPDNFTYPFVLKACSLLVALKEGVQIHAHVFKA-GLEVDVFVQNGLISMYGKCGAIEHAG 186
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV-EVNELTLVSVLSACANL 243
++F+QM EK+V +W+++I H + + E + L M G E LVS LSAC +L
Sbjct: 187 VVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHL 246
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
G+ LG+ +H + +N LN + +L DMY KCG +E+ L VF+ + KN ++ +I
Sbjct: 247 GSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMI 306
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
GLAIHG G EAV++F M G+ PDDV + VL+ACSHAGL+ +G + F M+ ++ +
Sbjct: 307 AGLAIHGRGREAVRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVNEGLQCFNRMQFEHMI 366
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
+P ++HYGC+VDL+ RA +L EAY++I++MP++PN V+W SLL+AC N+E+ EI
Sbjct: 367 KPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHH---NLEIGEI 423
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVH 483
A E + +L N G+Y++++N+YA +W + ++R M E+++V+ PG S++E N V+
Sbjct: 424 AAENIFRLNKHNPGDYLVLANMYARAKKWANVARIRTEMAEKHLVQTPGFSLVEANRNVY 483
Query: 484 EFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
+F+ D P E IY M++ + L+ E Y M
Sbjct: 484 KFVSQDKSQPICETIYDMIQQMEWQLKFEGYTPDM 518
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 197/477 (41%), Positives = 285/477 (59%), Gaps = 9/477 (1%)
Query: 42 HLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
H+ +FKQVHA ++K T + L +L + YA +F QI PS+F +NT
Sbjct: 10 HMEEFKQVHAHVLKCGIFFDTFCMSNLVATC-ALTKWGSMDYACSIFTQIDEPSSFDYNT 68
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSK 158
+IRG + LY MI G++PD FTYP +LKAC L V VH V K
Sbjct: 69 MIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMG 128
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
VI LI Y G++K+A +F+ M EK+V +W+A+I H + + E + L
Sbjct: 129 LEGDVIVQ-NSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLL 187
Query: 219 RKMRDSG-VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
KM G V E TLV+VLSAC +LG+ +LGK +H + +N LN + +L DMY K
Sbjct: 188 GKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVK 247
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
G +E+ LRVFK + EKN ++ +I GLAIHG G+EA+K+F +M G+ PDDV + V
Sbjct: 248 SGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGV 307
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
+ACSHAGL+E+G + F +M+ ++K+EP V+HYGC+VDLL R +L EAYE+I++M ++P
Sbjct: 308 FSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKP 367
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
N V+W SLL+AC N+E+ +IA E L L N G+Y++++N+YA +WDD K
Sbjct: 368 NDVIWRSLLSACKVHH---NLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAK 424
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+R + ERN+V+ PG S+IE V++F+ D P IY M+ + L+ E Y
Sbjct: 425 IRTKLAERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGY 481
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 199/511 (38%), Positives = 297/511 (58%), Gaps = 49/511 (9%)
Query: 25 NTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQ--- 80
NT H L LLQ C+ K +H +++ ISD +A +L+ V+ S
Sbjct: 7 NTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHL----ISDVFVASRLLALCVDDSTFNK 62
Query: 81 ----IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPI 136
+ YA+ +F+QI NP+ F FN +IR ++ + YTQM+ + + PD+ T+P
Sbjct: 63 PTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPF 122
Query: 137 LLKACGDLRQV---KGVHSLVVK---SKDF---NSVIH---------------------- 165
L+KA ++ V + HS +V+ D NS++H
Sbjct: 123 LIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRD 182
Query: 166 --SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
S T ++ YC G V++A+ +FD+M +N+ TW+ MING+ K + + IDLF M+
Sbjct: 183 VVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKR 242
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
GV NE +VSV+S+CA+LGA E G+ +E+V K+ + +N LG AL DM+ +CG IE+
Sbjct: 243 EGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEK 302
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A+ VF+ + E + +W+SII GLA+HG +A+ F QM G P DVT AVL+ACSH
Sbjct: 303 AIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSH 362
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
GL+EKG EI+ NM++D+ +EP ++HYGC+VD+L RA L EA I M ++PNA + G
Sbjct: 363 GGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILG 422
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL AC N E+AE LIK++P + G YVL+SNIYA QWD +R +MK
Sbjct: 423 ALLGACKIYK---NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMK 479
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDG-RHP 493
E+ + K PG S+IEI+ +++F +GD +HP
Sbjct: 480 EKLVKKPPGWSLIEIDGKINKFTMGDDQKHP 510
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 191/485 (39%), Positives = 284/485 (58%), Gaps = 11/485 (2%)
Query: 41 THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFN 100
T L Q Q+HAQI+K+ + + +L + + YAHL+ N + ++F N
Sbjct: 4 TSLSQAMQLHAQILKSPDPKKQTRNLTPLFTFAALSPAGDLTYAHLILNSLSTQNSFFHN 63
Query: 101 TVIRGYAEAGLGHRGIQLYTQMI--GNGLDPDSFTYPILLKACGDLRQV---KGVHSLVV 155
T+IR Y++ + + L+ M+ PD FTYP LLK+C L+Q K +H L+
Sbjct: 64 TMIRAYSQTPDPTQALHLFLSMLCQPTSPRPDKFTYPFLLKSCARLKQPRVGKQLHGLIY 123
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
KS S + LI Y + G A +F +M +++VV+WT+MI+G V E I
Sbjct: 124 KS-GLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAI 182
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
LF +M + GVE NE T+VSVL ACA+ GA +G+ V + + I L + AL DMY
Sbjct: 183 RLFEEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMY 242
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
AKCG I A +VF ++ K+V W ++I GLA HG EEAV +F QM+ G++PD+ T+
Sbjct: 243 AKCGSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMT 302
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
AVL+AC +AG +G F +M Y ++P ++HYGC+VDLL R LDEA E IR MP+
Sbjct: 303 AVLSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPI 362
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMER--LIKLEPFNDGNYVLMSNIYAAKAQWD 453
EP+ VLW +L+ A D ++ +E M+ L+K++ + G+YVL+ N+YA+ +W
Sbjct: 363 EPDVVLWRTLIWASKVHGD---IDRSEQLMKDRGLLKMDSDDCGSYVLLGNVYASAGKWH 419
Query: 454 DAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREEC 513
D KMR LM ++ + K PGCS IE++ +VHEF GD H +E+IY+ L+ V L+ E
Sbjct: 420 DKAKMRELMNQKGLSKPPGCSRIEVDGLVHEFAAGDSGHIEAEKIYAKLDEVEERLKAEG 479
Query: 514 YAARM 518
Y ++
Sbjct: 480 YHPKL 484
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 194/540 (35%), Positives = 300/540 (55%), Gaps = 76/540 (14%)
Query: 38 QKCTHLVQFKQVHAQIIKAS-FDNRTISDTQLAKLIESLVNS--SQIAYAHLVFNQIINP 94
+ T L Q+H ++++ F + +S L++ N S +A VF+ I NP
Sbjct: 41 KSITSLQYLTQLHGLVLRSGHFQDHYVS----GALLKCYANPHFSNFDFALKVFSSIPNP 96
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVH 151
+ F +N VI+G E + I Y +M+ + P+ FTYP L KAC + V + +H
Sbjct: 97 NVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIH 155
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGD------------------------------VK 181
VVK S +H + I Y +FG ++
Sbjct: 156 GHVVK-HGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLE 214
Query: 182 SAQLLFDQMTEKNV-------------------------------VTWTAMINGHVKQKN 210
+A+ LF QM KN+ ++W++M++G++
Sbjct: 215 AAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGR 274
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
Y+E +++F++M+ L SVL+AC+N+GA + G+WVH ++ +N I L+ LG A
Sbjct: 275 YKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTA 334
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMYAKCG ++ VF+ + E+ + TWN++IGGLAIHG E+A+++F ++Q +KP+
Sbjct: 335 LLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPN 394
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+TL+ VLTAC+HAG ++KG IF MR Y V+P ++HYGC+VDLL R+ L EA ++I
Sbjct: 395 GITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLI 454
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+MPM+PNA +WG+LL AC N +LAE + L++LEP N G YVL+SNIYA
Sbjct: 455 NSMPMKPNAAVWGALLGACRIH---GNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVG 511
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
++DD K+R+LMK+R I PG S++++N VHEF +GDG HP +EIY L+ + L+
Sbjct: 512 RFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQ 571
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 193/518 (37%), Positives = 306/518 (59%), Gaps = 45/518 (8%)
Query: 24 SNTATKSHHHLPLLQ-KCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL--VNSSQ 80
S+ + + +L L+ +C+ + + KQ+HA +IK ISDT A + + + S
Sbjct: 18 SSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGL----ISDTVTASRVLAFCCASPSD 73
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI--GNGLDPDSFTYPILL 138
+ YA+LVF +I + + F +NT+IRG++ + I ++ M+ + P TYP +
Sbjct: 74 MNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 139 KACGDLRQVKG---VHSLVVK------SKDFNSVIH------------------------ 165
KA G L Q + +H +V+K S N+++H
Sbjct: 134 KAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVV 193
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
+ +I + G + AQ LFD+M ++N V+W +MI+G V+ +++ +D+FR+M++
Sbjct: 194 AWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD 253
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
V+ + T+VS+L+ACA LGASE G+W+HE++ +N LN + AL DMY KCG IEE L
Sbjct: 254 VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGL 313
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
VF+ +K + WNS+I GLA +G E A+ +F +++ SG++PD V+ I VLTAC+H+G
Sbjct: 314 NVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG 373
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
+ + E F M+ Y +EP++KHY +V++L A LL+EA +I+NMP+E + V+W SL
Sbjct: 374 EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSL 433
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L+AC NVE+A+ A + L KL+P YVL+SN YA+ +++A + R LMKER
Sbjct: 434 LSACRKI---GNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKER 490
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
+ K GCS IE++ VHEF+ G HP S EIYS+L+
Sbjct: 491 QMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLD 528
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 201/552 (36%), Positives = 324/552 (58%), Gaps = 53/552 (9%)
Query: 9 SQLTHFTNSANSHKNSNTATKSHHHLPL-LQKCTHLVQFKQVHAQIIKASFDNRTISDTQ 67
+QL+ S +HK + T + L L C +L QF ++ +Q+I F ISDT
Sbjct: 7 NQLSSALKSTFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGF----ISDTF 62
Query: 68 LA-KLIESLVNSSQIA--YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
A +L++ +S I Y+ +F++I N + F +NT++R Y ++ + + LY M+
Sbjct: 63 AASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVK 122
Query: 125 NGLDPDSFTYPILLKACG-DLRQVKG--VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
N + PD++TYP++++AC L + G +H V+K F+S ++ LI Y G+++
Sbjct: 123 NNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKV-GFDSDVYVQNTLINMYAVCGNMR 181
Query: 182 SAQLLFD----------------------------------QMTEKNVVTWTAMINGHVK 207
A+ LFD +M EK++V+W+A+I+G+ +
Sbjct: 182 DARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQ 241
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK----NCIIL 263
Y E + +F +M +G+ ++E+ +VSVLSACA+L + GK +H V + + + L
Sbjct: 242 NGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNL 301
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+ L +DMY KCG +E AL VF + EK V +WN++I GLA++G E ++ MF +M+
Sbjct: 302 QNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMK 361
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
+G+ P+++T + VL AC H GL+++G+ F +M + +EPNVKHYGC+VDLL RA LL
Sbjct: 362 NNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLL 421
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
+EA ++I +MPM P+ WG+LL AC D E+ E +LI+L+P +DG +VL+S
Sbjct: 422 NEAEKLIESMPMAPDVATWGALLGACKKHGD---TEMGERVGRKLIELQPDHDGFHVLLS 478
Query: 444 NIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
NI+A+K W+D ++R +MK++ +VK PGCS+IE N VVHEF+ GD HP ++ ML
Sbjct: 479 NIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLN 538
Query: 504 YVAISLREECYA 515
+A L+ E YA
Sbjct: 539 EMAKRLKMEGYA 550
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 175/448 (39%), Positives = 275/448 (61%), Gaps = 10/448 (2%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD + D LI + IA A +F++I ++N +I GYAE G +
Sbjct: 146 FDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEAL 205
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITF 173
+L+ +M+ + PD T ++ AC + + VHS + F S + + LI
Sbjct: 206 ELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWI-DDHGFGSNLKIVNALIDL 264
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y G+V++A LF+ ++ K+V++W +I G+ Y+E + LF++M SG N++T+
Sbjct: 265 YIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTM 324
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLG--AALTDMYAKCGYIEEALRVFKIV 291
+S+L ACA+LGA E+G+W+H ++NK + + +L DMYAKCG IE A +VF +
Sbjct: 325 LSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI 384
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
L +++ +WN++I G A+HG A +F +M+ + I+PDD+T + +L+ACSH+G+++ G+
Sbjct: 385 LNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGR 444
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
IF +M+ DYK+ P ++HYGC++DLL + L EA E+I M MEP+ V+W SLL AC
Sbjct: 445 HIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKM 504
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
NVEL E + LIK+EP N G+YVL+SNIYA +W++ K+R L+ ++ + K P
Sbjct: 505 H---GNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVP 561
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIY 499
GCS IEI+ VVHEF++GD HP + EIY
Sbjct: 562 GCSSIEIDSVVHEFIIGDKFHPRNREIY 589
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 235/457 (51%), Gaps = 43/457 (9%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ---IAYAHLVFNQIINPSTFAFNT 101
+ +HAQ+IK N ++ L+KLIE V S + YA VF I P+ +NT
Sbjct: 2 SLRMIHAQMIKTGLHN---TNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNT 58
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVK-S 157
+ RG+A + + LY MI GL P+ +T+P LLK+C R+ + +H V+K
Sbjct: 59 MFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLG 118
Query: 158 KDFNSVIH-----------------------------SLTRLITFYCNFGDVKSAQLLFD 188
D + +H S T LIT Y + G + SAQ +FD
Sbjct: 119 YDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFD 178
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
++ K+VV+W AMI+G+ + N +E ++LF++M + V +E T+VSV+SACA + EL
Sbjct: 179 EIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIEL 238
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G+ VH +++ + N K+ AL D+Y KCG +E A +F+ + K+V +WN++IGG
Sbjct: 239 GRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTH 298
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV- 367
+EA+ +F +M SG P+DVT++++L AC+H G IE G+ I + + K N
Sbjct: 299 MNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANAS 358
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
H L+D+ + ++ A +V ++ + + W +++ A AN + R
Sbjct: 359 SHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFA-MHGRANAAFDIFSRMR 416
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
++EP +D +V + + + D + R MKE
Sbjct: 417 KNEIEP-DDITFVGLLSACSHSGMLDLGRHIFRSMKE 452
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 198/513 (38%), Positives = 299/513 (58%), Gaps = 28/513 (5%)
Query: 13 HFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KL 71
H + +S + S + K+ HL Q T L KQ HA I++ + D+ +A L
Sbjct: 38 HLIPNGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGH----LQDSYIAGSL 93
Query: 72 IESLVNSSQIAYAHL-----VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG 126
++S N S Y VF+ + P+ F +N +I+ E + I LY +M+
Sbjct: 94 VKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAH 153
Query: 127 LDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGD-VKS 182
P+ +TYP +LKAC D V VH+ +VK H L+ I Y +FG V++
Sbjct: 154 FRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVK-HGLGGDGHILSSAIRMYASFGRLVEA 212
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
++L D+ E + V ++ + E +++F +M+ + + L SVLSACAN
Sbjct: 213 RRILDDKGGEVDAVCMPD------RKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN 266
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
LGA + G+W+H + +N I L+ LG +L DMYAKCG I+ A VF+ + K V +WN++
Sbjct: 267 LGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAM 326
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
IGGLA+HG E+A+ +F +M I P+++T + VL AC+H GL++KG IF +MR++Y
Sbjct: 327 IGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYG 383
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
VEP ++HYGC+VDLL RA LL EA +V+ ++P EP +WG+LL AC NVEL E
Sbjct: 384 VEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKH---GNVELGE 440
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN-DV 481
+ L++LEP N G Y L+SNIYA +W++ G++R+LMKER I PG S+I++
Sbjct: 441 RVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGE 500
Query: 482 VHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
VH+F++GDG HP ++IY ML+ V L+ E Y
Sbjct: 501 VHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGY 533
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 185/484 (38%), Positives = 293/484 (60%), Gaps = 12/484 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKL-IESLVNSSQIAYAHLVFNQII 92
LP L CT L Q+HA +K+ T+L L + + +AYA VF++I
Sbjct: 23 LPHLPHCTSLRALAQLHAAAVKSGLGAHPALVTRLLTLCTKQGAAPAHLAYARQVFDRIP 82
Query: 93 NPSTFA-FNTVIRGYAEAGLGH-RGIQLYTQMIGNGLDPDSFTYPILLKACGDLR---QV 147
P +NT++RGYA + G ++ +M+ G+ PD++T+ LLKAC R +
Sbjct: 83 TPGDVVWYNTLLRGYARSSDGAAEAARVLARMLEEGVAPDTYTFVSLLKACAAARAGEEG 142
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN-VVTWTAMINGHV 206
+ H + VK+ + + L LI Y GD +SA+ +F ++ + VV++ AMI V
Sbjct: 143 RQAHGVAVKTGAADHE-YVLPTLINMYAECGDARSARAMFGRVPNGDCVVSYNAMITAAV 201
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ E + LFR+M+ G++ +T+ SVLSACA LGA ELG+W+HE+V K + K
Sbjct: 202 RSSRPGEALVLFREMQAKGLKPTSVTVTSVLSACALLGALELGRWIHEYVRKAGLDSLVK 261
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+ AL DMY KCG +E+A+ VF+ + ++ W+ +I A H G EA+ +F +M+ G
Sbjct: 262 VNTALIDMYGKCGSLEDAIDVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQG 321
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
I+PD VT + VL ACSH+G++ +G + F +M R+Y + P +KHYGC+ DLL R+ L++A
Sbjct: 322 IRPDAVTFLGVLYACSHSGMVSEGLQYFDSM-REYGIVPGIKHYGCVTDLLARSGQLEKA 380
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
Y+ I +P++P A+LW +LL+AC S GA V+L + ER+++L+ + +YV+ SN+
Sbjct: 381 YKFIDELPIQPTAILWRTLLSACGS--HGA-VDLGKRVFERILELDDTHGSDYVIFSNLC 437
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
A +W++ ++R+LM E+ +VK PGCS IEI++ VHEF GDGRHP S++ M++ V
Sbjct: 438 ANTGKWEEMNRVRKLMNEKGVVKVPGCSSIEIDNRVHEFFAGDGRHPQSQDARRMVDQVI 497
Query: 507 ISLR 510
L+
Sbjct: 498 EQLK 501
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 179/435 (41%), Positives = 270/435 (62%), Gaps = 20/435 (4%)
Query: 96 TFAFNTVIRGYAEA-----GLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQV 147
+F +NT+IR + +A G H I ++ +M +G+ PD T+P LL++ L
Sbjct: 24 SFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLG 83
Query: 148 KGVHSLVVKSKDFNSVIHSL--TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
+ VH+ +++ F I T LI+ Y + G V A+ LF M E+NV++W+ MING+
Sbjct: 84 RSVHAQILR---FGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGY 140
Query: 206 VKQKNYREGIDLFRKMRDSGV---EVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
V+ Y+E + LFR+M+ GV NE T+ VL+AC LGA E GKW H +++K +
Sbjct: 141 VRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMP 200
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
++ LG AL DMYAKCG +E+A VF + K+V W+++I GLA+HG EE V +F +
Sbjct: 201 VDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSK 260
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
M G++P+ VT +AV AC H GL+ +GK+ M DY + P ++HYGC+VDL RA
Sbjct: 261 MINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAG 320
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVL 441
+ EA+ V+++MPMEP+ ++WG+LL+ D +E E+A+++LI+LEP N G YVL
Sbjct: 321 RIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGD---IETCELALKKLIELEPTNSGAYVL 377
Query: 442 MSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSM 501
+SN+YA + +W+D +R LM+ I K PGCS+IE+ V+HEF VGD HP + +I+ M
Sbjct: 378 LSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMM 437
Query: 502 LEYVAISLREECYAA 516
LE + L+ E Y
Sbjct: 438 LEEILERLKVEGYVG 452
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 270/423 (63%), Gaps = 5/423 (1%)
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVH 151
+ P+ + TV+ + G+Q++ ++ +G+ PD L+ + ++
Sbjct: 119 VVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAW 178
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
L + N+V S T +I+ + G V A+ LFD M E++ V+WTAMI+G+V+ +
Sbjct: 179 ELFEGMEVRNTV--SWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQF 236
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
RE +++FR+M+ S V +E T+VSV++ACA LGA E G+W +++++ I ++ +G AL
Sbjct: 237 REALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNAL 296
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
DMY+KCG I++AL VFK + ++ TW ++I GLA++G GEEA+ MF++M PD+
Sbjct: 297 VDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDE 356
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
VT I VLTAC+HAGL++KG++ F +M Y + PNV H+GCL+DLL RA L EA E I
Sbjct: 357 VTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIG 416
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
NMPM PN+ +WG+LL AC N E+ ++A E L++L+ N Y+L+SN+YA +
Sbjct: 417 NMPMRPNSAIWGTLLAACRVH---GNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNR 473
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
W+D ++R+++ E+ I K PGCS+IE+N +HEF+ GD HP S+EIYS L+ V L++
Sbjct: 474 WEDVRRLRQVIMEKGIKKEPGCSLIEMNGTIHEFIAGDRSHPMSKEIYSKLDKVLTDLKD 533
Query: 512 ECY 514
Y
Sbjct: 534 AGY 536
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 153/318 (48%), Gaps = 44/318 (13%)
Query: 116 IQLYTQMIGNGLDPDSFTYPILLKA--CGDLRQVKG--VHSLVVK-SKDFNSVIHSLTRL 170
+++Y M+ G PD++T+P LLKA R G VH+ VVK + N+ H + L
Sbjct: 3 LRVYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNA--HVASSL 60
Query: 171 ITFYCNFGDVKSAQLLFDQMTEK---NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
+ Y GD A+ L D + V W A+I+GH + + +R F M +GV
Sbjct: 61 VLMYAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVV 120
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC--------- 278
+T ++VLSAC LG VH+ V + ++ + K+G AL DMYA+C
Sbjct: 121 PTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWEL 180
Query: 279 ----------------------GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAV 316
G +++A +F + E++ +W ++I G G EA+
Sbjct: 181 FEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREAL 240
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYGCLVD 375
+MF +MQ S ++ D+ T+++V+TAC+ G +E G+ Y R K++ V + LVD
Sbjct: 241 EMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGN--ALVD 298
Query: 376 LLCRARLLDEAYEVIRNM 393
+ + + +A V + M
Sbjct: 299 MYSKCGSIQQALGVFKEM 316
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 119/263 (45%), Gaps = 9/263 (3%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
F+ + +T +I + Q+ A +F+ + T ++ +I GY +AG +
Sbjct: 181 FEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREAL 240
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVK-GVHSLVVKSK---DFNSVIHSLTRLIT 172
+++ +M + + D FT ++ AC L ++ G + + S+ ++ + + L+
Sbjct: 241 EMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGN--ALVD 298
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
Y G ++ A +F +M ++ TWTA+I G + E I++F +M +E+T
Sbjct: 299 MYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVT 358
Query: 233 LVSVLSACANLGASELGK-WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KI 290
+ VL+AC + G + G+ + I N L D+ + G ++EAL +
Sbjct: 359 FIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNM 418
Query: 291 VLEKNVCTWNSIIGGLAIHGCGE 313
+ N W +++ +HG E
Sbjct: 419 PMRPNSAIWGTLLAACRVHGNSE 441
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 347 bits (890), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 187/489 (38%), Positives = 296/489 (60%), Gaps = 17/489 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKAS--FDNRTISDTQLAKLI--ESLVNSSQIAYAHLVFN 89
L L CT L Q+HA +KA T+L L + + +AYA VF+
Sbjct: 32 LAYLPHCTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFD 91
Query: 90 QIINPSTFA-FNTVIRGYAEAGL----GHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL 144
+I +P +NT++RGYA G +++ +M+ G+ PD++T+ LLKAC
Sbjct: 92 RIPHPGDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASA 151
Query: 145 R---QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
R + + H + VK+ + T LI Y GDV++A+++FD+M + VV++ AM
Sbjct: 152 RAGEEGRQAHGVAVKAGAAEHEYVAPT-LINMYAECGDVRAARVMFDRMDGECVVSYNAM 210
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
I V+ E + LFR+M+ G++ +TL+SVLSACA LGA ELG+W+H+++ K +
Sbjct: 211 ITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRL 270
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
K+ AL DMYAKCG +E+A+ VF+ + ++ W+ ++ A HG G EA+ MF +
Sbjct: 271 DSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEE 330
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
M+ G+KPDDVT + VL ACSH+G++ +G + F +M R+Y + +KHYGC+ DLL R+
Sbjct: 331 MKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSG 389
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVL 441
L+ AY+ I +P++P A+LW +LL+ACA D V++ + ER+++L+ + G+YV+
Sbjct: 390 QLERAYKFIDELPIKPTAILWRTLLSACAGHGD---VDMGKRVFERILELDDSHGGDYVI 446
Query: 442 MSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSM 501
SN+ A +W++ +R+LM E+ +VK PGCS IEI+++VHEF GDG HP S+E M
Sbjct: 447 FSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRM 506
Query: 502 LEYVAISLR 510
++ V L+
Sbjct: 507 VDEVIEQLK 515
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 347 bits (890), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 173/396 (43%), Positives = 259/396 (65%), Gaps = 15/396 (3%)
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLK---ACGDLRQV-KGVHSLVVKSK-DFNSVIHSLTR 169
G+Q++ +++G+G+ PD L+ C D+ K + V+S + S++ LTR
Sbjct: 164 GMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTR 223
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
L G V A+ LF +M E++ V+WTAMI+G+V+ +RE +++FR+M+ S V +
Sbjct: 224 L-------GRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSAD 276
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
E T+VSV++ACA LGA E+G+WV ++++ I ++ +G AL DMY+KCG IE AL VFK
Sbjct: 277 EFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFK 336
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ ++ TW +II GLA++G GEEA++MF +M PD+VT I VLTAC+HAGL++K
Sbjct: 337 DMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDK 396
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
G+E F +MR Y + PNV HYGC++DL RA + EA + I MPM PN+ +WG+LL AC
Sbjct: 397 GREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAAC 456
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
N E+ E+ ERL++++P N Y L+SNIYA +W+D ++R + E+ I K
Sbjct: 457 RVH---GNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKK 513
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
PGCS+IE+N ++HEF+ GD HP S+EIY LE +
Sbjct: 514 EPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESI 549
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 151/311 (48%), Gaps = 39/311 (12%)
Query: 119 YTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYC 175
Y +M+ G PD++T+P LLKA V+ VH+ VVK H T L+T Y
Sbjct: 31 YARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKF-GMGRNAHVATSLVTAYA 89
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
GD +A+ L + V W A+I+GH + + + E F M +G +T VS
Sbjct: 90 AGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVS 149
Query: 236 VLSACA-NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
VLSAC G LG VH V + ++ + ++ AL DMYA+C +E A ++F + +
Sbjct: 150 VLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVR 209
Query: 295 NVCTWNSIIGGLAIHGCGE-------------------------------EAVKMFWQMQ 323
+V +W S++ GL G + EA++MF +MQ
Sbjct: 210 SVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQ 269
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
S + D+ T+++V+TAC+ G +E G+ + Y R+ K++ V + L+D+ +
Sbjct: 270 CSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGN--ALIDMYSKCGS 327
Query: 383 LDEAYEVIRNM 393
++ A +V ++M
Sbjct: 328 IERALDVFKDM 338
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 130/305 (42%), Gaps = 43/305 (14%)
Query: 58 FDNRTI-SDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD + S L+ L ++ A +F ++ T ++ +I GY +A +
Sbjct: 203 FDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREAL 262
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVK-GVHSLVVKSKD---FNSVIHSLTRLIT 172
+++ +M + + D FT ++ AC L ++ G V S+ ++ + + LI
Sbjct: 263 EMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNA--LID 320
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
Y G ++ A +F M ++ TWTA+I G E I++F +M +E+T
Sbjct: 321 MYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVT 380
Query: 233 LVSVLSACANLGASELGKWVHEF--------------VNKNCIILNDKLGAALTDMYAKC 278
+ VL+AC + G + G+ EF V+ CII D++ +
Sbjct: 381 FIGVLTACTHAGLVDKGR---EFFLSMRETYNIAPNVVHYGCII----------DLFGRA 427
Query: 279 GYIEEALRVF-KIVLEKNVCTWNSIIGGLAIHG---CGEEAVKMFWQMQMSGIKPDDVTL 334
G I EAL ++ + N W +++ +HG GE + QM P++ T+
Sbjct: 428 GKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMD-----PENSTV 482
Query: 335 IAVLT 339
+L+
Sbjct: 483 YTLLS 487
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/510 (34%), Positives = 298/510 (58%), Gaps = 39/510 (7%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L L + LV+ ++H K FD+ T L ++ + +IA A L+F+++ +
Sbjct: 129 LKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAA---CGRIAEARLMFDKMFH 185
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGV 150
++ +I GY ++GL + + L+ +M ++PD +L ACG +L K +
Sbjct: 186 RDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMI 245
Query: 151 HSLVVKSK-----DFNSVIHSL-------------------------TRLITFYCNFGDV 180
H ++++ S + ++ T ++T Y G +
Sbjct: 246 HDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQI 305
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
++A+ +F+QM +K++V W+AMI+G+ + + +E ++LF +M+ G++ +++T++SV++AC
Sbjct: 306 ENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITAC 365
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A+LGA + KW+H FV+KN + AL +MYAKCG +E A R+F + KNV +W
Sbjct: 366 AHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWT 425
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
+I A+HG A++ F QM+ I+P+ +T + VL ACSHAGL+E+G++IFY+M +
Sbjct: 426 CMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINE 485
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
+ + P HYGC+VDL RA LL EA E++ MP+ PN ++WGSL+ AC + +EL
Sbjct: 486 HNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGE---IEL 542
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
E A +RL++L+P +DG +V +SNIYA +W+D G++R+LMK + I K GCS E+N+
Sbjct: 543 GEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNN 602
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+HEF+V D H ++EIY L V L+
Sbjct: 603 EIHEFLVADRSHKHADEIYEKLYEVVSKLK 632
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 216/424 (50%), Gaps = 42/424 (9%)
Query: 30 SHHHL-PLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKL-IESLVNSSQIAYAHLV 87
SHH L L T L KQVHAQI+++ D T + L KL I S SS + YA V
Sbjct: 22 SHHTLFSALSSATSLTHLKQVHAQILRSKLDRST---SLLVKLVISSCALSSSLDYALSV 78
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ- 146
FN I P T N +R + + + + +Y +M GL D F++P LLKA ++
Sbjct: 79 FNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSL 138
Query: 147 VKG--VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMING 204
V+G +H L K F+S T L+ Y G + A+L+FD+M ++VVTW+ MI+G
Sbjct: 139 VEGLEIHGLAAK-LGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDG 197
Query: 205 HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
+ + + + + LF +M++ VE +E+ L +VLSAC G GK +H+F+ +N I+++
Sbjct: 198 YCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVD 257
Query: 265 DKLGAALTDMYAKC-------------------------------GYIEEALRVFKIVLE 293
L +AL MYA C G IE A VF +++
Sbjct: 258 PHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVK 317
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K++ W+++I G A +EA+ +F +MQ GIKPD VT+++V+TAC+H G +++ K I
Sbjct: 318 KDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWI 377
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
+ ++ + L+++ + L+ A + MP N + W +++A A
Sbjct: 378 HLFVDKN-GFGGALPINNALIEMYAKCGSLERARRIFDKMP-RKNVISWTCMISAFAMHG 435
Query: 414 DGAN 417
D +
Sbjct: 436 DAGS 439
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 197/515 (38%), Positives = 298/515 (57%), Gaps = 15/515 (2%)
Query: 8 NSQLTHFTNSANSHKNSNTATKSH-HHLPLLQKC---THLVQFKQVHAQIIKASFDNRTI 63
+ L + +N H S T ++ ++ LLQ C + KQ+HAQ+ A F T+
Sbjct: 52 QTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTV 111
Query: 64 SDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI 123
T+L L ++ A L+F++I + F +N +IRGYA G +QLY QM
Sbjct: 112 IATKLVNL---YCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF 168
Query: 124 GNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
GL PD+FT+P +LKAC L + + +H VV++ + + LI Y G V
Sbjct: 169 DYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQT-GWEKDVFVGAALIDMYAKCGCV 227
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
SA+ +FD++ ++ V W +M+ + + + + L +M +G+ E TLV+ +SA
Sbjct: 228 GSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISAS 287
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A+ A G+ +H + +DK+ AL DMYAKCG + A +F+ + K V +WN
Sbjct: 288 ADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWN 347
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
++I G A+HG EA+ +F +M KPD +T + VL+ACSH GL+E+G F M RD
Sbjct: 348 AMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRD 406
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
YK++P V+HY C+VDLL + LDEAY +I M + P++ +WG+LL +C ANVEL
Sbjct: 407 YKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIH---ANVEL 463
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
EIA+ERLI+LEP + GNYV++SNIYA +W+ K+R+LM +R + K+ CS IE+ +
Sbjct: 464 GEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKN 523
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
VH F+ GD HP S+EIYS LE V ++E Y+
Sbjct: 524 KVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYS 558
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 194/525 (36%), Positives = 305/525 (58%), Gaps = 50/525 (9%)
Query: 36 LLQKCTHLVQFKQ---VHAQIIKA---SFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
LL +C + +Q + AQII + S D I+ K I + + ++ L+FN
Sbjct: 27 LLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIA----VKFIGVSSSHGNLRHSVLIFN 82
Query: 90 QIIN-PSTFAFNTVIRGYAEAGLGHRGIQLYTQ--MIGNGLDPDSFTYPILLKACGDLRQ 146
++ P+ FA+N +++ +++ H I + ++ N +PD +T+ +LKAC L Q
Sbjct: 83 HFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQ 142
Query: 147 V---KGVHSLVVK--------------------------SKDFNSVIH----SLTRLITF 173
V + VH V K K F+ ++ S LI+
Sbjct: 143 VLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISG 202
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR-DSGVEVNELT 232
YC G V A+++FD M EKN+V+W+ MI+G+ + + Y + I+LFR+M+ + G+ N++T
Sbjct: 203 YCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVT 262
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
LVSVLSACA+LGA +LGKW+H F+ +N I + LG AL DMYAKCG + EA VF +
Sbjct: 263 LVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMH 322
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
E++V +W+ II GLA++G EA F +M G++P+D++ + +LTAC+HAGL++KG E
Sbjct: 323 ERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLE 382
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
F M + Y + P ++HYGC+VDLL RA LD+A +I +MPM+PN ++WG+LL C
Sbjct: 383 YFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIY 442
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
D E E + R+++L+ + G+ V ++N+YA+ + DDA R M++ +K PG
Sbjct: 443 KDA---ERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPG 499
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
CS IEIN+ V+EF +GD HP S IYSM+ + ++ Y +
Sbjct: 500 CSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPK 544
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/438 (39%), Positives = 275/438 (62%), Gaps = 13/438 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDP 129
LI V+ I A +F++I ++N +I GY E G ++L+ +M+ + P
Sbjct: 161 LIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRP 220
Query: 130 DSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
D T ++ AC + + VHS + F S + + LI Y FG+V++A L
Sbjct: 221 DESTMVTVVSACAQSDSIELGRHVHSWI-NDHGFASNLKIVNALIDLYSKFGEVETACEL 279
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD + K+V++W +I G+ Y+E + LF++M SG N++T++S+L ACA+LGA
Sbjct: 280 FDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 339
Query: 247 ELGKWVHEFVNKNC--IILN-DKLGAALTDMYAKCGYIEEALRVFKIVLE-KNVCTWNSI 302
++G+W+H ++NK ++ N L +L DMYAKCG I+ A +VF + +++ TWN++
Sbjct: 340 DIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAM 399
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
I G A+HG A +F +M+M+GI+PDD+T + +L+ACSH+G+++ G+ IF +M R Y+
Sbjct: 400 ISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYE 459
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
+ P ++HYGC++DLL + L EA E+I MPMEP+ V+W SLL AC N+EL E
Sbjct: 460 ITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIH---GNLELGE 516
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN-PGCSVIEINDV 481
++LIK+EP N G+YVL+SNIYAA +W++ K+R L+ ++ + K PGCS IEI+ V
Sbjct: 517 SFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSV 576
Query: 482 VHEFMVGDGRHPCSEEIY 499
VHEF++GD HP + EIY
Sbjct: 577 VHEFIIGDKLHPQNREIY 594
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 225/426 (52%), Gaps = 43/426 (10%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQI---AYAHLVFNQIINPSTFAFNTVI 103
+ +HAQ+IK N ++ L+KL+E V S YA VF+ I P+ +NT+
Sbjct: 5 RXIHAQMIKTGLHN---TNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMF 61
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVK-SKD 159
RG+A + ++LY MI GL PDS+T+P LLK+C ++ + +H V+K D
Sbjct: 62 RGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFD 121
Query: 160 FNSVIH-----------------------------SLTRLITFYCNFGDVKSAQLLFDQM 190
+ +H S T LI Y + G ++SAQ LFD++
Sbjct: 122 LDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEI 181
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRK-MRDSGVEVNELTLVSVLSACANLGASELG 249
K+VV+W AMI+G+V+ NY+E ++LF++ M + V +E T+V+V+SACA + ELG
Sbjct: 182 PGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELG 241
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
+ VH ++N + N K+ AL D+Y+K G +E A +F + K+V +WN++IGG
Sbjct: 242 RHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHM 301
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK-VEPNVK 368
+EA+ +F +M SG P+DVT++++L AC+H G I+ G+ I + + K V NV
Sbjct: 302 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVS 361
Query: 369 HY-GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
L+D+ + +D A +V + + W ++++ A AN + R
Sbjct: 362 SLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFA-MHGRANAAFDIFSRMR 420
Query: 428 LIKLEP 433
+ +EP
Sbjct: 421 MNGIEP 426
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 140/296 (47%), Gaps = 38/296 (12%)
Query: 146 QVKGVHSLVVKSKDFNSVIHSLTRLITFYC---NFGDVKSAQLLFDQMTEKNVVTWTAMI 202
V+ +H+ ++K+ N+ ++L++L+ F +F A +FD + E N++ W M
Sbjct: 3 SVRXIHAQMIKTGLHNTN-YALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMF 61
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
GH + + L+ M G+ + T +L +CA + G+ +H V K
Sbjct: 62 RGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFD 121
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKI-------------------------------V 291
L+ + +L MYA+ G +E+A +VF I +
Sbjct: 122 LDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEI 181
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ-MQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
K+V +WN++I G G +EA+++F + M M+ ++PD+ T++ V++AC+ + IE G
Sbjct: 182 PGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELG 241
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+ + ++ D+ N+K L+DL + ++ A E+ + + + W +L+
Sbjct: 242 RHV-HSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGL-WNKDVISWNTLI 295
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/420 (42%), Positives = 263/420 (62%), Gaps = 7/420 (1%)
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVK 156
N++IR Y + + ++ M + PDS T+P +LKA L K +H +V++
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 157 SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID 216
F +++ T L+ YC + A LFD+M E+N VTW A+I G+ + + + ID
Sbjct: 118 -MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAID 176
Query: 217 LFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYA 276
FR M G + +E T+V VLSAC++LGA GKW+HEF+ N + LN +G AL DMYA
Sbjct: 177 AFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYA 236
Query: 277 KCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIA 336
KCG + E +VF+ + EKNV TWN +I G A++G G+ A++ F +M M KPD+VT +
Sbjct: 237 KCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLG 296
Query: 337 VLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPME 396
VL AC H GL+ +G+ F +M++ + ++P ++HYGC+VDLL RA LL+EA E+I++M +E
Sbjct: 297 VLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIE 356
Query: 397 PNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAG 456
P+ ++W +LL AC N +L E ++RLI+LEP N NYVL+SNIY+ + +W + G
Sbjct: 357 PDPIIWRALLCACRVH---GNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVG 413
Query: 457 KMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
K+R +M R I K PGCS IEIN+VV+EF+ + R P E IY L+ + L+E Y
Sbjct: 414 KLRGMMSLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVT 473
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/420 (42%), Positives = 263/420 (62%), Gaps = 7/420 (1%)
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVK 156
N++IR Y + + ++ M + PDS T+P +LKA L K +H +V++
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 157 SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID 216
F +++ T L+ YC + A LFD+M E+N VTW A+I G+ + + + ID
Sbjct: 118 -MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAID 176
Query: 217 LFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYA 276
FR M G + +E T+V VLSAC++LGA GKW+HEF+ N + LN +G AL DMYA
Sbjct: 177 AFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYA 236
Query: 277 KCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIA 336
KCG + E +VF+ + EKNV TWN +I G A++G G+ A++ F +M M KPD+VT +
Sbjct: 237 KCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLG 296
Query: 337 VLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPME 396
VL AC H GL+ +G+ F +M++ + ++P ++HYGC+VDLL RA LL+EA E+I++M +E
Sbjct: 297 VLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIE 356
Query: 397 PNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAG 456
P+ ++W +LL AC N +L E ++RLI+LEP N NYVL+SNIY+ + +W + G
Sbjct: 357 PDPIIWRALLCACRVH---GNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVG 413
Query: 457 KMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
K+R +M R I K PGCS IEIN+VV+EF+ + R P E IY L+ + L+E Y
Sbjct: 414 KLRGMMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVT 473
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/403 (43%), Positives = 259/403 (64%), Gaps = 11/403 (2%)
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLK---ACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLI 171
G+Q++ +++G+G+ PD L+ C D+ G V SV+ S T L+
Sbjct: 142 GMQVHGRVVGSGVLPDLRVENALVDMYAECADM----GSAWKVFDGMQVRSVV-SWTSLL 196
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
+ G V A+ LFD+M E++ V+WTAMI+G+V +RE +++FR+M+ S V +E
Sbjct: 197 SGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEF 256
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
T+VSV++ACA LGA E+G+WV ++++ I ++ +G AL DMY+KCG IE AL VFK +
Sbjct: 257 TMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGM 316
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
++ TW +II GLA++G EEA++MF +M PD+VT I VLTAC+HAGL++KG+
Sbjct: 317 HHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGR 376
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
E F +M Y + PNV HYGC++DLL RA + EA + I MPM PN+ +WG+LL AC
Sbjct: 377 EFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRV 436
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
N E+ E+ ERL++L+P N Y+L+SNIYA +W+D ++R + E+ I K P
Sbjct: 437 H---GNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEP 493
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
GCS+IE++ ++HEF+ GD HP S+EIYS LE + L Y
Sbjct: 494 GCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGY 536
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 149/316 (47%), Gaps = 47/316 (14%)
Query: 119 YTQMIGNGLDPDSFTYPILLKAC-------GDLRQVKGVHSLVVKSKDFNSVIHSLTRLI 171
Y +M+ G PD++T+P LLKA G + VH+ VV+ H + L+
Sbjct: 7 YARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVR-LGMGRNAHVASSLV 65
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
Y GD +A+ L + V W A+I+GH + + E F M +G +
Sbjct: 66 AAYTAGGDGAAARALVGEC--DTPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPV 123
Query: 232 TLVSVLSACANLGASE--LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
T VSVLSAC G + LG VH V + ++ + ++ AL DMYA+C + A +VF
Sbjct: 124 TYVSVLSACGK-GTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFD 182
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGE-------------------------------EAVKM 318
+ ++V +W S++ GLA G + EA++M
Sbjct: 183 GMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEM 242
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYGCLVDLL 377
F +MQ S + D+ T+++V+TAC+ G +E G+ + Y R+ K++ V + L+D+
Sbjct: 243 FREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGN--ALIDMY 300
Query: 378 CRARLLDEAYEVIRNM 393
+ ++ A +V + M
Sbjct: 301 SKCGSIERALDVFKGM 316
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/468 (38%), Positives = 301/468 (64%), Gaps = 13/468 (2%)
Query: 46 FKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
+Q+HA+++ + +IS L K+I +L I YA +F+QI P+ F++N++I
Sbjct: 4 LRQIHARLLTHAMPISSIS-FGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMI 62
Query: 104 RGYAEAGLGHR-GIQLYTQMIGNGL-DPDSFTYPILLKACG---DLRQVKGVHSLVVKSK 158
RG +++ + + L+ +M+ G +P++FT +LKAC L + + VH+ V+KS
Sbjct: 63 RGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKS- 121
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
F S T L+ FY D+ A +FD++T++N+V W+ MI+G+ + E + LF
Sbjct: 122 GFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLF 181
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
R M+ +GV +E+T+VSV+SACA GA + GKWVH ++NK I + +L AL +MYAKC
Sbjct: 182 RDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKC 241
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G IE A VF + K+ W+S+I GLAI+G E+A++ F++M+ + +KP+ VT I VL
Sbjct: 242 GCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVL 301
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
+AC+H+GL+ +G+ + +M ++ + P+++ YGC+VDLLCRA L+++A ++ MP+ PN
Sbjct: 302 SACAHSGLVSEGRRYWSSM-LEFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPN 360
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
V+W +LL C + N++ +E+ +RL++LEP N NY+L+SN+YA+ +QW+ ++
Sbjct: 361 PVIWRTLLVGCKKSK---NLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQV 417
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
R+ MK I PGCS IE++ +VHEF++GD HP + E+ +L ++
Sbjct: 418 RKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDIS 465
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 177/481 (36%), Positives = 280/481 (58%), Gaps = 47/481 (9%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q KQ+HA ++ D+ LIE L+ + YA +F+QI PS + +N I+
Sbjct: 3 QLKQIHAYSLRNGLDHTKF-------LIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQ 55
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFN 161
++ G HR LY QM G P+ +++ L AC L V + +HS KS F
Sbjct: 56 TFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKS-GFA 114
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
S + ++T L+ Y G ++SA+ LFD+M +++ TW ++I G+ + + ++LF KM
Sbjct: 115 SDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKM 174
Query: 222 --------------------------------RDSGVEVNELTLVSVLSACANLGASELG 249
+ G + NE+++ SVL AC+ LGA ++G
Sbjct: 175 PVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIG 234
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGGLAI 308
K + + N N + A+ +++A+CG IEEA +VF +I ++N+C+WN++I GLA+
Sbjct: 235 KRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAV 294
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
HG +A++++ QM + ++PDDVT + +L AC+H G++ +G+++F +M ++V P ++
Sbjct: 295 HGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLE 354
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HYGCLVDLL RA L EAY +I+NMPM P++V+WG+LL AC+ NVEL E+A E L
Sbjct: 355 HYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFH---GNVELGEVAAESL 411
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
KLEP+N GNYV++SNIYA W ++R++MK +I K G S IE+ D +HEF+V
Sbjct: 412 FKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHEFIVE 471
Query: 489 D 489
D
Sbjct: 472 D 472
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 128/299 (42%), Gaps = 38/299 (12%)
Query: 144 LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
+ Q+K +H+ ++ N + H+ LI D+ A LFDQ+ + +V + I
Sbjct: 1 MNQLKQIHAYSLR----NGLDHT-KFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQ 55
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
+ L+ +M G N+ + + ACA+L G+ +H K+
Sbjct: 56 TFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFAS 115
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+ AL DMYAK G + A ++F + +++ TWNS+I G A G E A+++F +M
Sbjct: 116 DMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMP 175
Query: 324 M--------------------------------SGIKPDDVTLIAVLTACSHAGLIEKGK 351
+ G KP++V++ +VL ACS G ++ GK
Sbjct: 176 VRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGK 235
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
I R + + N +++L R ++EA +V + + N W +++ A
Sbjct: 236 RIEAYARNNGFFK-NAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLA 293
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/512 (36%), Positives = 305/512 (59%), Gaps = 39/512 (7%)
Query: 34 LPLLQ-KCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
L +LQ +CT++ +++HA IIK + T++ +++ S +S I YA+L+F I
Sbjct: 28 LTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCAS--SSGDINYAYLLFTTIP 85
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL------RQ 146
+P+ + +NT+IRG++ + H I L+ M+ + + P TYP + KA L Q
Sbjct: 86 SPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYPSVFKAYAQLGAGYDGAQ 145
Query: 147 VKG-VHSLVVKSKDF--NSVIH----------------SLTRLITFYCN--------FGD 179
+ G V L ++ F N++I+ L L CN G+
Sbjct: 146 LHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLAKCGE 205
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
V ++ LFD M + VTW +MI+G+V+ K E ++LFRKM+ VE +E T+VS+LSA
Sbjct: 206 VDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVSLLSA 265
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
CA+LGA + G+WVH++V + LN + A+ DMY KCG I +A+ VF+ + + W
Sbjct: 266 CAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTRGLSCW 325
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
NSII GLA++G +A++ F +++ S +KPD V+ I VLTAC + G + K ++ F M
Sbjct: 326 NSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFSLMMN 385
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
Y++EP++KHY C+V++L +A LL+EA ++I+ MP++ + ++WGSLL++C NVE
Sbjct: 386 KYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSC---RKHGNVE 442
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
+A+ A +R+ +L P + Y+LMSN+ AA Q+++A + R LM+ER K PGCS IE+
Sbjct: 443 IAKRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPGCSSIELY 502
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
VHEF+ G HP + EIY +L + +L++
Sbjct: 503 GEVHEFLAGGRLHPKAREIYYLLNDSSFALQD 534
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 301/529 (56%), Gaps = 42/529 (7%)
Query: 15 TNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIE 73
+ + H + TA ++ LL C+ + ++HA +++ D SD +A +L
Sbjct: 12 ASDSGGHHGALTADRA---ASLLAACSTARRASELHAAVVRKGLD----SDRAVAFRLQR 64
Query: 74 SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFT 133
+ S ++ ++ + + +P+T + + I ++ GL G+ L + M+ GL P + T
Sbjct: 65 AYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHT 124
Query: 134 YPILLKACGDLRQVKGVHSLVVK---SKD-----------------------FNSV---- 163
L AC L + +H+ K S D F+ +
Sbjct: 125 LSASLPACRGLSLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPH 184
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ S+T ++T Y N G + A+ LFD + K+ + W AMI+G+ + E + LFR+M
Sbjct: 185 VVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLR 244
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFV-NKNCIILNDKLGAALTDMYAKCGYIE 282
S E +E+T+V VLSA A LG E GKW+H +V N C+ LN ++ AL DMY KCG +E
Sbjct: 245 SSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLE 304
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+A+ VF + K++ WN++I G A+HG +A++MF Q++ G+ P D+T I +L ACS
Sbjct: 305 DAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACS 364
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
H+GL+E+G+ F +M +Y ++P ++HYGC+VDLL RA L++EA+ +++++ + P+AV+W
Sbjct: 365 HSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMW 424
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
SLL AC N+ L + + L+ N G Y+L+SNIYAA +W++ ++R +M
Sbjct: 425 VSLLAACRLHK---NMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMM 481
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
K I K PGCS IEI+ V+EF+ GD HPC++EIY+ML+ + ++E
Sbjct: 482 KASGIQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKE 530
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 187/513 (36%), Positives = 299/513 (58%), Gaps = 11/513 (2%)
Query: 12 THFTNSANSHKNSN--TATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA 69
+HF + N+ S+ A + L LL++C + +FKQVHA I+K + + L
Sbjct: 10 SHFLSLPNNPPQSSELNAKFNVQGLSLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLV 69
Query: 70 KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP 129
+L + YA +F QI P +F +NT+IRG + + LY +M+ G++P
Sbjct: 70 ATC-ALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEP 128
Query: 130 DSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
D+FTYP +LKAC G L++ +H+ V K+ + LI Y G ++ A ++
Sbjct: 129 DNFTYPFVLKACSLLGALKEGVQIHAHVFKA-GLEGDVFVQNGLINMYGKCGAIEHASVV 187
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV-EVNELTLVSVLSACANLGA 245
F+QM EK+V +W+++I H + + E + L M G E LVS LSAC +LG+
Sbjct: 188 FEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGS 247
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
G+ +H + +N LN + +L DMY K G +E+ L VF+ + +KN ++ II G
Sbjct: 248 PNFGRCIHGILLRNISELNVAVKTSLIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITG 307
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
LAIHG G EA+ +F M G+ PDDV + VL+ACSHAGL+ +G + F ++ ++K++P
Sbjct: 308 LAIHGRGREALSVFSDMLEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFNRLQFEHKIKP 367
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAM 425
++HYGC+VDL+ RA +L AY++I++MP++PN V+W SLL+AC N+E+ EIA
Sbjct: 368 TIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKPNDVVWRSLLSACKVHH---NLEIGEIAA 424
Query: 426 ERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEF 485
E + KL N G+Y++++N+YA +W D ++R M E+++V+ PG S++E N V++F
Sbjct: 425 ENIFKLNQHNPGDYLVLANMYARAKKWADVARIRTEMAEKHLVQTPGFSLVEANRNVYKF 484
Query: 486 MVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
+ D P E IY M++ + L+ E Y M
Sbjct: 485 VSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDM 517
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/501 (37%), Positives = 293/501 (58%), Gaps = 19/501 (3%)
Query: 22 KNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL-VNSSQ 80
K + + H L L CT L Q+HA +KA T+L L +
Sbjct: 17 KPKSPPPQQHPVLSHLPHCTSLRTLAQLHAAAVKAGLAAHPALVTRLLTLCTGPDAGPAH 76
Query: 81 IAYAHLVFNQIINPSTFA-FNTVIRGYAEAG-----LGHRGIQLYTQMIGNGLDPDSFTY 134
+AYA VF+++ +P+ +NT++RGYA + ++++ +M+ G+ PD++T+
Sbjct: 77 LAYARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTF 136
Query: 135 PILLKACGDLR---QVKGVHSLVVKSKDFNSVIHSLTR--LITFYCNFGDVKSAQLLFDQ 189
LLKAC R + + H+L VK + H R LI Y GD ++A+++F
Sbjct: 137 VSLLKACAAARAGEEGRQAHALAVK---LGAADHDYVRPTLINMYAECGDARAARVMFGG 193
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
VV++ AMI V+ E + LFR+M+ G++ +T++SVLSACA LGA ELG
Sbjct: 194 TDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELG 253
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
+WVH++V K + K+ AL DMYAKCG +E+A+ VF+ + K+ W+ +I A H
Sbjct: 254 RWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANH 313
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
G G EA+ +F +M+ G+KPDD+T + VL ACSH+GL+ +G + F +M +D+ + P +KH
Sbjct: 314 GYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDM-KDHGIVPGIKH 372
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
YGC+ DLL R+ L+ AY+ I +P+ P +LW +LL+AC D EL + ER++
Sbjct: 373 YGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGD---FELGKRVFERIL 429
Query: 430 KLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGD 489
KL+ + G+YV+ SN+ A W++ +R+LM E+ +VK PGCS IEI++ VHEF GD
Sbjct: 430 KLDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCSSIEIDNTVHEFFAGD 489
Query: 490 GRHPCSEEIYSMLEYVAISLR 510
GRHP S+E M++ V L+
Sbjct: 490 GRHPKSQEARKMVDEVIDQLK 510
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 200/525 (38%), Positives = 296/525 (56%), Gaps = 53/525 (10%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL--VNSSQIAYAHLVFNQIINP 94
L C +L Q KQVHA+I+ D S LAKLI +L +N Y +FNQ+ P
Sbjct: 53 LDGCKNLTQIKQVHARILLNGLDQ---SCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYP 109
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVH 151
+ F +N +IRGY + Y+ M G+ P SFT+ L KACG D+ + +H
Sbjct: 110 NPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIH 169
Query: 152 SLVVKSKDFNSVIH-------------------------------SLTRLITFYCNFGDV 180
+ F +H S T LI+ Y G++
Sbjct: 170 GQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNM 229
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
+SA LFD + K++V WT M++G + RE I F KM++ GVE +E+TL+ V+SAC
Sbjct: 230 ESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISAC 289
Query: 241 ANLGASELGKWVH------EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
A LGA++ W+ EF K+ +++ G+AL DMY+KCG + +A RVF+ + E+
Sbjct: 290 AQLGAAKYADWIRDVAEKSEFGGKHSVVV----GSALIDMYSKCGSVGDAYRVFQGMKER 345
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
NV +++S+I G A+HG +A+K+F +M + IKP+ VT I VLTACSHAG++E+G +IF
Sbjct: 346 NVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIF 405
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
M + Y ++P+ HY C+VDLL RA L EA+E+++ MP+EP+ +WG+LL AC
Sbjct: 406 ELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHK- 464
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
+ ++A IA L +LEP+ GNY+L++NIYA+ +W+D +R+LM+ R + KNP S
Sbjct: 465 --SPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFS 522
Query: 475 VIEIND-VVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
IE +VHEF GD HP S EI LE + L + Y +
Sbjct: 523 WIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHL 567
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 185/525 (35%), Positives = 306/525 (58%), Gaps = 47/525 (8%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL-AKLIES--LVNSSQIAYAHLV 87
H + LL T + +Q+HA++ + + T+ D L + +++ L + + + YA+ +
Sbjct: 15 HPAISLLDSGTTFKEIRQIHAKL----YVDGTLKDDHLVGQFVKAVALSDHTYLDYANQI 70
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI--GNGLDPDSFTYPILLKACGDLR 145
++ P+ FA N++IR + ++ + + Y++++ GNGL PD++T L++AC L
Sbjct: 71 LDRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLG 130
Query: 146 QVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFG------------------------ 178
+ VH + ++ + F++ H T LI+ Y G
Sbjct: 131 MRETGLQVHGMTIR-RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMV 189
Query: 179 -------DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
DV A+ LF+ M EK+ + W AMI+G+ + RE ++LF M+ GV+VN +
Sbjct: 190 TACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGV 249
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
+++SVLSAC LGA + G+W H ++ +N I + +LG L D+YAKCG +++A+ VF +
Sbjct: 250 SMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGM 309
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
EKNV TW+S + GLA++G GE+ +K+F M+ G+ P+ VT ++VL CS G +++G+
Sbjct: 310 EEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 369
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
+ F +MR ++ +EP + HYGCLVDL RA L++A +I+ MPM+ +A +W SLL A
Sbjct: 370 KHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRM 429
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
N+EL +A +++++LE N G YVL+SNIYA WD+ +R+ MK + + K P
Sbjct: 430 Y---KNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQP 486
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
GCSV+E+N VHEF VGD HP EI ++ + ++ LR Y A
Sbjct: 487 GCSVMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISRRLRLAGYKA 531
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 225/390 (57%), Gaps = 7/390 (1%)
Query: 126 GLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
G P+ T+ ++ AC G+ + +H LV+KS V + L+ Y GD+ S
Sbjct: 632 GFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEV-KVVNALMNLYGKTGDLIS 690
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
+ LF+ ++ KN+V+W MI H++ EG+ F R G++ ++ T ++VL C +
Sbjct: 691 SCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCED 750
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
+G L + +H + N + AL D+YAK G +E++ VF + + W ++
Sbjct: 751 IGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAM 810
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
+ A HG G +A+K F M G+ PD VT +L ACSH+GL+E+G+ F M + Y+
Sbjct: 811 LAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYR 870
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
+EP + HY C+VDL+ R+ LL +AY +I+ MPMEP++ +WG+LL AC D +L
Sbjct: 871 IEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKD---TQLGT 927
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
A +RL +LEP + NY+++SNIY+A W DA ++R LMK++ +V+ G S IE + +
Sbjct: 928 KAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKI 987
Query: 483 HEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
H+F+VGD HP SE+I L+ + ++ E
Sbjct: 988 HKFVVGDWSHPESEKIQKKLKEIRKKMKSE 1017
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 121/246 (49%), Gaps = 11/246 (4%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL-- 144
+F + + ++NT+I + + GL G+ + GL PD T+ +L+ C D+
Sbjct: 694 LFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGV 753
Query: 145 -RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
R +G+H L++ FN+ T L+ Y G ++ + +F ++T + + WTAM+
Sbjct: 754 VRLSQGIHGLIMFC-GFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLA 812
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
+ R+ I F M G+ + +T +L+AC++ G E G++ E ++K I
Sbjct: 813 AYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRI- 871
Query: 264 NDKLG--AALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHG---CGEEAVK 317
+L + + D+ + G +++A + K + +E + W +++G ++ G +A K
Sbjct: 872 EPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAK 931
Query: 318 MFWQMQ 323
++++
Sbjct: 932 RLFELE 937
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 34 LPLLQKCTHL--VQFKQ-VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
L +L+ C + V+ Q +H I+ F+ T T L L L ++ + VF +
Sbjct: 742 LAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKL---GRLEDSSTVFLE 798
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
I +P + A+ ++ YA G G I+ + M+ GL PD T+ LL AC
Sbjct: 799 ITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNAC 849
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 311/583 (53%), Gaps = 78/583 (13%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDN 60
+ K P ++ T T + +H S + H +PL+ L Q Q+HAQI F +
Sbjct: 13 LFKPTSPPAKTTTVTTTTRAHGPSRSPET--HFIPLIHASNTLPQLHQIHAQI----FLH 66
Query: 61 RTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLY 119
S++++ +LI S + + YA +F +P+ F FN +IRG AE + +
Sbjct: 67 NLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHF 126
Query: 120 TQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVK-SKDFNSVIH---------- 165
M+ + PD T P +LK+ L V + +H V+K +F+S +
Sbjct: 127 VLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKI 186
Query: 166 ------------SLTR-----------LITFYCNFGDVKSAQLLFDQMTE---------- 192
S R LI C GD+ A LF+ M E
Sbjct: 187 GELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLI 246
Query: 193 ---------------------KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
KNVV+WT MING + ++ + + +F +M + GV N+L
Sbjct: 247 NGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDL 306
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
T+VS L AC +GA ++G+ +H +++ N LN +G AL DMYAKCG I+ A RVF
Sbjct: 307 TVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVET 366
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
K++ TW+ +I G AIHGC ++A++ F +M+ +GI PD+V +A+LTACSH+G +++G
Sbjct: 367 KGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGL 426
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
F +MR DY +EP +KHY +VDLL RA LDEA I++MP+ P+ V+WG+L AC +
Sbjct: 427 NFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRA 486
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
N+E+AE+ E+L++LEP + G+YV +SN+YAA +W+D ++R LMK R + K+P
Sbjct: 487 HK---NIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDP 543
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
G S IE+ VH F+ GD H +EEI LE + S ++E Y
Sbjct: 544 GWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGY 586
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 293/507 (57%), Gaps = 34/507 (6%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L QKC + KQ+H QII +T + L K I S N + YA +FN I NP+
Sbjct: 155 LQQKCNNFNTLKQIHTQIITTGLSFQTYCLSHLIK-ISSKFN---LPYAFKIFNYISNPT 210
Query: 96 TFAFNTVIRGY---AEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKACGDLRQ----- 146
F +NT+I H LY +++ N L P+SFT+P L KAC +
Sbjct: 211 IFLYNTLISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSFTFPSLFKACCSNQSWFHYG 270
Query: 147 -VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
+ H L F++ + + L+ FY +G + ++ +FD++ E ++ TW ++N +
Sbjct: 271 PLLHTHVLKFLQPPFDNFVQA--SLLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAY 328
Query: 206 VKQKNYR-------------EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
+ +Y E + LFR M+ G+ NE+T+V+++SAC+NLGA G WV
Sbjct: 329 ARSSSYHSYSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWV 388
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE--KNVCTWNSIIGGLAIHG 310
H FV +N I +N +G A DMY+KCG + A +VF + E ++ + ++IGG A+HG
Sbjct: 389 HCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHG 448
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
G +A++++ +M+ G+ PD T + + ACSH GL+E+G EIF +M+ + VEP ++HY
Sbjct: 449 YGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHY 508
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
GCL+DLL RA L EA E + +MPM+PNAVLW SLL A A N+ + E+A+ +LI+
Sbjct: 509 GCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGA---ARIHGNLGVGEVALTKLIE 565
Query: 431 LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
LEP GNYVL+SN+YA+ + +D ++R+LMK + K PG S++EI +HEF+ GD
Sbjct: 566 LEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDR 625
Query: 491 RHPCSEEIYSMLEYVAISLREECYAAR 517
HP S+EIY + + L E + AR
Sbjct: 626 SHPFSKEIYLKIAEINSRLEEYGHKAR 652
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 186/516 (36%), Positives = 298/516 (57%), Gaps = 11/516 (2%)
Query: 8 NSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQ 67
S L NS N L LL++C + +FK+VHA I+K + +
Sbjct: 9 QSHLLSLPNSPLQSSELNAKFNEQGWLSLLKRCKSMEEFKKVHAHILKLGLFYDSFCGSN 68
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL 127
L +L + YA +F QI P +F +NT+IRG + + LY +M+ G+
Sbjct: 69 LVASC-ALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGI 127
Query: 128 DPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSV----IHSLTRLITFYCNFGDVKSA 183
+PD+FTYP +LKAC L +K + + + FN+ + LI+ Y G ++ A
Sbjct: 128 EPDNFTYPFVLKACSLLVALK--EGVQIHAHVFNAGLEVDVFVQNGLISMYGKCGAIEHA 185
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACAN 242
++F+QM EK+V +W+++I H + + E + L M R+ E LVS LSAC +
Sbjct: 186 GVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEESILVSALSACTH 245
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
LG+ LG+ +H + +N LN + +L DMY KCG +E+ L VF+ + KN ++ +
Sbjct: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVM 305
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
I GLAIHG G EA+++F M G+ PDDV + VL+ACSHAGL+++G + F M+ ++
Sbjct: 306 IAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVKEGFQCFNRMQFEHM 365
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
++P ++HYGC+VDL+ RA +L EAY++I++MP++PN V+W SLL+AC N+E+ E
Sbjct: 366 IKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHH---NLEIGE 422
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
IA + + KL N G+Y++++N+YA +W + ++R M E+N+V+ PG S++E N V
Sbjct: 423 IAADNIFKLNKHNPGDYLVLANMYARAQKWANVARIRTEMVEKNLVQTPGFSLVEANRNV 482
Query: 483 HEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
++F+ D P E IY M++ + L+ E Y M
Sbjct: 483 YKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDM 518
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 185/512 (36%), Positives = 292/512 (57%), Gaps = 44/512 (8%)
Query: 41 THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFN 100
+ L+ + +H ++KASF + L SL + A+LVF++I+ ++N
Sbjct: 145 SSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSL---GDLDSAYLVFSKIVEKDIVSWN 201
Query: 101 TVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKS 157
++I G+ + G +QL+ +M P+ T +L AC DL + + ++
Sbjct: 202 SMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERN 261
Query: 158 K-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY----- 211
D N ++ + ++ Y G ++ A+ LFD+M EK++V+WT MI+G+ K +Y
Sbjct: 262 GIDINLILSN--AMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARR 319
Query: 212 --------------------------REGIDLFRKMR-DSGVEVNELTLVSVLSACANLG 244
+E + +FR+++ + + NE+TL S L+ACA LG
Sbjct: 320 VFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLG 379
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
A +LG W+H ++ K I LN + +L DMY+KCG++E+AL VF V ++V W+++I
Sbjct: 380 AMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIA 439
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVE 364
GLA+HG G A+ +F +MQ + +KP+ VT +L ACSH+GL+++G+ F MR Y V
Sbjct: 440 GLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVV 499
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIA 424
P KHY C+VD+L RA L+EA E+I MP+ P+A +WG+LL AC NVELAE+A
Sbjct: 500 PGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIY---GNVELAEMA 556
Query: 425 MERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHE 484
RL++ + N G YVL+SNIYA +WD ++R+ MK + K PGCS IE+N ++HE
Sbjct: 557 CSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHE 616
Query: 485 FMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
F+VGD HP S EIYS L+ + ++ Y +
Sbjct: 617 FLVGDNSHPLSTEIYSKLDEIVARIKSTGYVS 648
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 238/452 (52%), Gaps = 47/452 (10%)
Query: 17 SANSHKNSNTATKSHHHLPLL-QKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL 75
+AN+ + SN +T +P+L KC + KQ+HA +++ S T+L +L
Sbjct: 21 TANNEQKSNPST-----VPILIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTAC-AL 74
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD-PDSFTY 134
+ S + YA VF+QI P+ + +NT+IR +A + +G+ ++ QM+ P+S+T+
Sbjct: 75 SSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTF 134
Query: 135 PILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
P ++KA ++ + + +H +V+K+ F S + LI FY + GD+ SA L+F ++
Sbjct: 135 PFVIKAATEVSSLLAGQAIHGMVMKA-SFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIV 193
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
EK++V+W +MI+G V+ + E + LF++M+ N +T+V VLSACA E G+W
Sbjct: 194 EKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRW 253
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI--- 308
+++ +N I +N L A+ DMY KCG +E+A R+F + EK++ +W ++I G A
Sbjct: 254 ACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGD 313
Query: 309 ----------------------------HGCGEEAVKMFWQMQMS-GIKPDDVTLIAVLT 339
+G +EA+ +F ++Q++ KP++VTL + L
Sbjct: 314 YDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLA 373
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
AC+ G ++ G I +++ ++ N L+D+ + L++A EV ++ +
Sbjct: 374 ACAQLGAMDLGGWIHVYIKKQ-GIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERR-DV 431
Query: 400 VLWGSLLTACASADDG-ANVELAEIAMERLIK 430
+W +++ A G A ++L E +K
Sbjct: 432 FVWSAMIAGLAMHGHGRAAIDLFSKMQETKVK 463
>gi|110741594|dbj|BAE98745.1| hypothetical protein [Arabidopsis thaliana]
Length = 527
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 191/521 (36%), Positives = 303/521 (58%), Gaps = 11/521 (2%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDN 60
M+K + S L + ++ + +N K L LL++C ++ +FKQVHA+ IK S
Sbjct: 1 MIKAPILQSLLASRDDLTHNPEVNNFGGKEQECLYLLKRCHNIDEFKQVHARFIKLSLFY 60
Query: 61 RTISDTQ--LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQL 118
+ LAK S +S + YA +F I +P TF FNT+IRGY +
Sbjct: 61 SSSFSASSVLAKCAHSGWENS-MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCF 119
Query: 119 YTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYC 175
Y +M+ G +PD+FTYP LLKAC L R+ K +H V K + + LI Y
Sbjct: 120 YNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFK-LGLEADVFVQNSLINMYG 178
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-RDSGVEVNELTLV 234
G+++ + +F+++ K +W++M++ + E + LFR M ++ ++ E +V
Sbjct: 179 RCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMV 238
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
S L ACAN GA LG +H F+ +N LN + +L DMY KCG +++AL +F+ + ++
Sbjct: 239 SALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKR 298
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
N T++++I GLA+HG GE A++MF +M G++PD V ++VL ACSH+GL+++G+ +F
Sbjct: 299 NNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVF 358
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
M ++ KVEP +HYGCLVDLL RA LL+EA E I+++P+E N V+W + L+ C
Sbjct: 359 AEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQ- 417
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
N+EL +IA + L+KL N G+Y+L+SN+Y+ WDD + R + + + + PG S
Sbjct: 418 --NIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFS 475
Query: 475 VIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
++E+ H F+ D HP +EIY ML + L+ E Y+
Sbjct: 476 IVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYS 516
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 191/521 (36%), Positives = 303/521 (58%), Gaps = 11/521 (2%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDN 60
M+K + S L + ++ + +N K L LL++C ++ +FKQVHA+ IK S
Sbjct: 1 MIKAPILQSLLASRDDLTHNPEVNNFGGKEQECLYLLKRCHNIDEFKQVHARFIKLSLFY 60
Query: 61 RTISDTQ--LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQL 118
+ LAK S +S + YA +F I +P TF FNT+IRGY +
Sbjct: 61 SSSFSASSVLAKCAHSGWENS-MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCF 119
Query: 119 YTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYC 175
Y +M+ G +PD+FTYP LLKAC L R+ K +H V K + + LI Y
Sbjct: 120 YNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKL-GLEADVFVQNSLINMYG 178
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-RDSGVEVNELTLV 234
G+++ + +F+++ K +W++M++ + E + LFR M ++ ++ E +V
Sbjct: 179 RCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMV 238
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
S L ACAN GA LG +H F+ +N LN + +L DMY KCG +++AL +F+ + ++
Sbjct: 239 SALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKR 298
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
N T++++I GLA+HG GE A++MF +M G++PD V ++VL ACSH+GL+++G+ +F
Sbjct: 299 NNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVF 358
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
M ++ KVEP +HYGCLVDLL RA LL+EA E I+++P+E N V+W + L+ C
Sbjct: 359 AEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQ- 417
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
N+EL +IA + L+KL N G+Y+L+SN+Y+ WDD + R + + + + PG S
Sbjct: 418 --NIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFS 475
Query: 475 VIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
++E+ H F+ D HP +EIY ML + L+ E Y+
Sbjct: 476 IVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYS 516
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 187/516 (36%), Positives = 306/516 (59%), Gaps = 43/516 (8%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPS 95
L+ C + Q KQ HA +I I+ +L K LI S S ++YAH +F+QI P
Sbjct: 22 LESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGS--LSYAHQLFDQIPKPD 79
Query: 96 TFAFNTVIRGYAEAGLG-HRGIQLYTQMIG-NGLDPDSFTYPILLKACGD-LRQVKG--- 149
F +NT+I+ +A H ++++ M+ +G P+ +T+ + KACG+ L ++G
Sbjct: 80 VFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQI 139
Query: 150 -VHSLVVKSKDFNSVIHSLTRL----------------------------ITFYCNFGDV 180
VH++ + + V +++ R+ I Y G++
Sbjct: 140 RVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEI 199
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
A+ +FD+M+E++VV+WT +I G+V+ ++E +DLF +M +G NE TL S L+AC
Sbjct: 200 GRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAAC 259
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF--KIVLEKNVCT 298
ANL A + G+W+H +++K+ I +N++L A+L DMYAKCG I+ A +VF + L+ V
Sbjct: 260 ANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWP 319
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
WN++IGG A+HG +EA+ +F QM++ + P+ VT +A+L ACSH L+E+G+ F +M
Sbjct: 320 WNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMA 379
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
Y +EP ++HYGC+VDLL R+ LL EA E + NMPM P+A +WG+LL AC D +
Sbjct: 380 SSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKD---I 436
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
E + + + +L+ + G +VL++N+Y+A QWD+A +R+ ++ K PGCS IE+
Sbjct: 437 ERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIEL 496
Query: 479 NDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
N V H+F+VGD HP ++++Y L+ + L+ Y
Sbjct: 497 NGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGY 532
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 181/463 (39%), Positives = 270/463 (58%), Gaps = 10/463 (2%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD ++ D LI V+ + A +F++I ++N +I GY ++G I
Sbjct: 189 FDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAI 248
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITF 173
+ +M + P+ T ++L ACG R K + S V + F S + LI
Sbjct: 249 VCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWV-RDNGFGSNLQLTNALIDM 307
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
YC G+ A+ LFD + EK+V++W MI G+ Y E + LF M S V+ N++T
Sbjct: 308 YCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTF 367
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCI-ILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
+ +L ACA LGA +LGKWVH +++KN N L +L DMYAKCG IE A RVF+ +
Sbjct: 368 LGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMH 427
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI-KPDDVTLIAVLTACSHAGLIEKGK 351
+N+ +WN+++ G A+HG E A+ +F +M G+ +PDD+T + VL+AC+ AGL++ G
Sbjct: 428 SRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGH 487
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
+ F +M +DY + P ++HYGC++DLL RA +EA +++NM MEP+ +WGSLL+AC +
Sbjct: 488 QYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKA 547
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
VE E ERL +LEP N G +VL+SNIYA +WDD ++R + ++ + K P
Sbjct: 548 H---GRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVP 604
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
GC+ IEI+ VHEF+VGD HP IY ML V L E +
Sbjct: 605 GCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGF 647
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 230/440 (52%), Gaps = 41/440 (9%)
Query: 7 PNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDT 66
P+ + HF +++ + H +L LL+KC ++ FKQ+H+ IIK +N +
Sbjct: 8 PSPSILHFLPASDP---PYKILEQHPYLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQS 64
Query: 67 QLAKLIESLVNSSQIAYAHLVF---NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI 123
+L ++ S ++YA +F Q + F +N++IRGY+ + + L+++M+
Sbjct: 65 KLIHFC-AVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRML 123
Query: 124 GNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVK-SKDFN-----SVIH--------- 165
G+ P+S T+P L K+C + K +H+ +K + FN SVIH
Sbjct: 124 YYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMD 183
Query: 166 ---------------SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
S T LIT Y + G + A+ LFD++ K+VV+W AMI+G+V+
Sbjct: 184 FARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGR 243
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
+ E I F +M+++ V N+ T+V VLSAC + + ELGKW+ +V N N +L A
Sbjct: 244 FEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNA 303
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMY KCG + A +F + EK+V +WN++IGG + EEA+ +F M S +KP+
Sbjct: 304 LIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPN 363
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
DVT + +L AC+ G ++ GK + + ++ + N + L+D+ + ++ A V
Sbjct: 364 DVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVF 423
Query: 391 RNMPMEPNAVLWGSLLTACA 410
R+M N W ++L+ A
Sbjct: 424 RSMHSR-NLASWNAMLSGFA 442
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 292/521 (56%), Gaps = 14/521 (2%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQV----HAQIIKA 56
+++ +V N + S + A + +L+ CT L + V H+ +IK
Sbjct: 72 LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKT 131
Query: 57 SFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD T L L + + A VF++I + ++ +I GY E+G +
Sbjct: 132 GFDWDVFVKTGLVCLYS---KNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEAL 188
Query: 117 QLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
L+ ++ GL PDSFT +L AC GDL + + + +S +V + T L+
Sbjct: 189 GLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVA-TSLVDM 247
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y G ++ A+ +FD M EK+VV W+A+I G+ +E +D+F +M+ V + +
Sbjct: 248 YAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAM 307
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
V V SAC+ LGA ELG W ++ + + N LG AL D YAKCG + +A VFK +
Sbjct: 308 VGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRR 367
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K+ +N++I GLA+ G A +F QM G++PD T + +L C+HAGL++ G
Sbjct: 368 KDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRY 427
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F M + V P ++HYGC+VDL RA LL EA ++IR+MPME N+++WG+LL C
Sbjct: 428 FSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHK 487
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
D +LAE +++LI+LEP+N G+YVL+SNIY+A +WD+A K+R + ++ + K PGC
Sbjct: 488 D---TQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGC 544
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
S +E++ VVHEF+VGD HP S +IY LE + LRE Y
Sbjct: 545 SWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGY 585
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 214/404 (52%), Gaps = 20/404 (4%)
Query: 37 LQKC-----THLVQFKQVHAQIIKASFDNRTISDTQLAKLI-ESLVNSSQIAYAHLVFNQ 90
L+KC L Q KQ H +++ DT L L+ S ++ + YA +VF Q
Sbjct: 5 LKKCFAWGLKSLHQAKQCHCLLLRLGLHQ----DTYLINLLLRSSLHFAATQYATVVFAQ 60
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGV 150
+P+ F +NT+IRG + +Y M +G PD+FT+P +LKAC L V
Sbjct: 61 TPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHV 120
Query: 151 ----HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
HSLV+K+ F+ + T L+ Y G + A+ +FD++ EKNVV+WTA+I G++
Sbjct: 121 GLSLHSLVIKT-GFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYI 179
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ + E + LFR + + G+ + TLV +L AC+ +G G+W+ ++ ++ + N
Sbjct: 180 ESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVF 239
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+ +L DMYAKCG +EEA RVF ++EK+V W+++I G A +G +EA+ +F++MQ
Sbjct: 240 VATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQREN 299
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
++PD ++ V +ACS G +E G M D + V L+D + + +A
Sbjct: 300 VRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTA-LIDFYAKCGSVAQA 358
Query: 387 YEVIRNMPMEP----NAVLWGSLLTACASADDGANVELAEIAME 426
EV + M + NAV+ G + A G ++ ++ M+
Sbjct: 359 KEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQ 402
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/470 (38%), Positives = 274/470 (58%), Gaps = 42/470 (8%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-- 141
A LV + ++ S + +IR +A +G + LY +I GL P T P LLK+
Sbjct: 41 AALVTSGLLRRSAELHDALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLAL 100
Query: 142 -----GDLRQVKGVHSLVVKS--KDFNSVIHSLTR------------------------- 169
G R VH+ V+ F V ++L R
Sbjct: 101 SPAVPGARRLALAVHAHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDAS 160
Query: 170 ----LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
LIT + G V A+ LFD+M E+N V+W+AM+NG+V+ + RE + +F +M+ G
Sbjct: 161 TFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQG 220
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
V ++ LV VL+ACA LGA E GKWVH ++ N I + LG AL DMYAKCG ++ +
Sbjct: 221 VRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGM 280
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
VF+ + +KNV W ++I GLA+HG G +++ +F QM+ SG+KPDD+ I L AC+H G
Sbjct: 281 EVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTG 340
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
L++KG+E+F +M +Y ++P ++HYGC+VDLL R LL EA +++ MPM+P+A++WG+L
Sbjct: 341 LVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGAL 400
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
+ C NVELAE ++ I+LEP G YVL+ NIY+A + A ++R LM+E+
Sbjct: 401 MAGCRFHK---NVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREK 457
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR-EECY 514
+ K PGCS +EI V+H+F+VGD HP ++I + + +R EE Y
Sbjct: 458 GVEKTPGCSNVEIKGVIHQFIVGDLSHPRIKDILTKWYEIDSRIRLEEGY 507
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 131/274 (47%), Gaps = 13/274 (4%)
Query: 48 QVHAQIIKASFDNRTISDTQLA-------KLIESLVNSSQIAYAHLVFNQIINPSTFAFN 100
+VHA ++ D + T A LI + + ++A A +F+++ + +++
Sbjct: 135 RVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWS 194
Query: 101 TVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKS 157
++ GY +AG G + +++QM G+ PD +L AC G L Q K VH +K+
Sbjct: 195 AMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGY-LKA 253
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
+ + T L+ Y G+V+ +F+ M +KNV+ WT MI G + + L
Sbjct: 254 NNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTL 313
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWV-HEFVNKNCIILNDKLGAALTDMYA 276
F +M SGV+ +++ + L AC + G + G+ + + VN I + + D+ A
Sbjct: 314 FSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLA 373
Query: 277 KCGYIEEAL-RVFKIVLEKNVCTWNSIIGGLAIH 309
+ G + EA V K+ ++ + W +++ G H
Sbjct: 374 RNGLLSEARDMVEKMPMKPDALIWGALMAGCRFH 407
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/504 (36%), Positives = 291/504 (57%), Gaps = 44/504 (8%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFD---------------NRTISDTQ---------- 67
LL+ C FK Q+H ++K FD N + D Q
Sbjct: 81 LLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRD 140
Query: 68 ---LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
LI + I A +F++I ++N +I GYAE G + ++L+ +M+
Sbjct: 141 VVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMK 200
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
+ PD T ++ AC G + + VHS + F S + + LI Y G+V+
Sbjct: 201 TNVKPDESTMATVVSACAQSGSIELGRQVHSWI-NDHGFGSNLKIVNALIDLYSKCGEVE 259
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
+A L + ++ K+V++W +I G+ Y+E + LF++M SG N++T++S+L ACA
Sbjct: 260 TACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 319
Query: 242 NLGASELGKWVHEFVNK---NCIILN-DKLGAALTDMYAKCGYIEEALRVF-KIVLEKNV 296
+LGA ++G+W+H +++K ++ N L +L DMYAKCG I+ A +V +++
Sbjct: 320 HLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSL 379
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
TWN++I G A+HG A +F +M+ +GI+PDD+T + +L+ACSH+G+++ G+ IF +
Sbjct: 380 STWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRS 439
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
MR+DY + P ++HYGC++DLL + L EA E+I MPMEP+ V+W SLL AC
Sbjct: 440 MRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIH---G 496
Query: 417 NVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN-PGCSV 475
N+EL E ++LIK+EP N G+YVL+SNIYA +W++ K+R L+ ++ + K PGCS
Sbjct: 497 NLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSS 556
Query: 476 IEINDVVHEFMVGDGRHPCSEEIY 499
IEI+ VVHEF++GD HP + EIY
Sbjct: 557 IEIDSVVHEFIIGDKLHPQNREIY 580
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 204/389 (52%), Gaps = 36/389 (9%)
Query: 58 FDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQ 117
F N + +QL + + + YA VF I P+ +N + RG+A + ++
Sbjct: 2 FPNTHYAXSQLLEFCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALK 61
Query: 118 LYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVK------------------ 156
LY MI GL P+ FT+P LLK+C ++ + +H V+K
Sbjct: 62 LYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYA 121
Query: 157 --------SKDFNSVIH----SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMING 204
K F+ H S T LIT Y + G ++SAQ +FD++ K+VV+W AMI+G
Sbjct: 122 QNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISG 181
Query: 205 HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
+ + NY++ ++LF++M + V+ +E T+ +V+SACA G+ ELG+ VH ++N + N
Sbjct: 182 YAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSN 241
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
K+ AL D+Y+KCG +E A + + + K+V +WN++IGG +EA+ +F +M
Sbjct: 242 LKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 301
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK--VEPNVKHY-GCLVDLLCRAR 381
SG P+DVT++++L AC+H G I+ G+ I + + K V N L+D+ +
Sbjct: 302 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCG 361
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+D A +V + + W +++ A
Sbjct: 362 DIDAAPQVSDSSAFNRSLSTWNAMIFGFA 390
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 170/434 (39%), Positives = 270/434 (62%), Gaps = 9/434 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI+ + I A +F++I ++N +I GYAE G ++L+ M+ + PD
Sbjct: 163 LIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 222
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T ++ AC G + + VHS + F S + + LI Y G++++A LF
Sbjct: 223 ESTMVTVVSACAQSGSIELGRQVHSWI-DDHGFGSNLKIVNALIDLYSKCGELETACGLF 281
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+ + K+V++W +I G+ Y+E + LF++M SG N++T++S+L ACA+LGA +
Sbjct: 282 EGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 341
Query: 248 LGKWVHEFVNKNC--IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
+G+W+H +++K + L +L DMYAKCG IE A +VF +L K++ +WN++I G
Sbjct: 342 IGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 401
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
A+HG + + +F +M+ +GI+PDD+T + +L+ACSH+G+++ G+ IF +M +DYK+ P
Sbjct: 402 FAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTP 461
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAM 425
++HYGC++DLL + L EA E+I M MEP+ V+W SLL AC NVEL E
Sbjct: 462 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMH---GNVELGESFA 518
Query: 426 ERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEF 485
+ LIK+EP N G+YVL+SNIYA +W++ R L+ ++ + K PGCS IEI+ VVHEF
Sbjct: 519 QNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEF 578
Query: 486 MVGDGRHPCSEEIY 499
++GD HP + EIY
Sbjct: 579 IIGDKFHPRNREIY 592
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 222/411 (54%), Gaps = 44/411 (10%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ---IAYAHLVFNQIINPSTFAF 99
L + +HAQ+IK N ++ L+KLIE + S + YA VF I P+ +
Sbjct: 3 LQSLRMIHAQMIKTGLHN---TNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIW 59
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVK 156
NT+ RG+A + ++LY MI GL P+S+T+P LLK+C ++ + +H V+K
Sbjct: 60 NTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLK 119
Query: 157 --------------------------SKDFNSVIH----SLTRLITFYCNFGDVKSAQLL 186
K F+ H S T LI Y + G +++AQ +
Sbjct: 120 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKM 179
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD++ K+VV+W AMI+G+ + NY+E ++LF+ M + V +E T+V+V+SACA G+
Sbjct: 180 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 239
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
ELG+ VH +++ + N K+ AL D+Y+KCG +E A +F+ + K+V +WN++IGG
Sbjct: 240 ELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGY 299
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
+EA+ +F +M SG P+DVT++++L AC+H G I+ G+ I + + K N
Sbjct: 300 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVAN 359
Query: 367 VKHY-GCLVDLLCRARLLDEAYEVIRNMPMEP----NAVLWGSLLTACASA 412
L+D+ + ++ A++V ++ + NA+++G + A A
Sbjct: 360 ASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 410
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 287/482 (59%), Gaps = 15/482 (3%)
Query: 40 CTHLV---QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
C HL+ Q KQ+H I++ ++ + L + N + AH +F ++
Sbjct: 231 CAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGN---VNTAHKLFERMPIRDV 287
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSL 153
++N +I GY+ H + + +M G+ P+S T +L AC L Q + +H
Sbjct: 288 ASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGY 347
Query: 154 VVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
++S + N V+ + L+ Y G+V SA LF++M +KNVV W A+I+G+ + +
Sbjct: 348 AIRSGFESNDVVGNA--LVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPH 405
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E + LF +M+ G++ + +VSVL ACA+ A E GK +H + ++ N +G L
Sbjct: 406 EALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLV 465
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
D+YAKCG + A ++F+ + E++V +W ++I IHG GE+A+ +F +MQ +G K D +
Sbjct: 466 DIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHI 525
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
A+LTACSHAGL+++G + F M+ DY + P ++HY CLVDLL RA LDEA +I+N
Sbjct: 526 AFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKN 585
Query: 393 MPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQW 452
M +EP+A +WG+LL AC N+EL E A + L +L+P N G YVL+SNIYA +W
Sbjct: 586 MSLEPDANVWGALLGACRIH---CNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRW 642
Query: 453 DDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
+D K+R++MKE+ + K PGCSV+ ++ V F+VGD HP SE+IY+MLE + +R+
Sbjct: 643 EDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKA 702
Query: 513 CY 514
Y
Sbjct: 703 GY 704
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 190/321 (59%), Gaps = 8/321 (2%)
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVK 148
I + + I GY + G ++ ++LY QM G++PD + ++KACG DL+ +
Sbjct: 81 IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGR 140
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
VH ++ ++ F S + T L + Y G +++A+ +FD+M +++VV+W A+I G+ +
Sbjct: 141 KVHEDII-ARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQN 199
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
E + LF +M+ +G++ N TLVSV+ CA+L A E GK +H + ++ I + +
Sbjct: 200 GQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVV 259
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
L +MYAKCG + A ++F+ + ++V +WN+IIGG +++ EA+ F +MQ+ GIK
Sbjct: 260 NGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIK 319
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
P+ +T+++VL AC+H +E+G++I Y +R + E N LV++ + ++ AY
Sbjct: 320 PNSITMVSVLPACAHLFALEQGQQIHGYAIRSGF--ESNDVVGNALVNMYAKCGNVNSAY 377
Query: 388 EVIRNMPMEPNAVLWGSLLTA 408
++ MP + N V W ++++
Sbjct: 378 KLFERMP-KKNVVAWNAIISG 397
>gi|296089760|emb|CBI39579.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 275/442 (62%), Gaps = 16/442 (3%)
Query: 44 VQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
Q Q+HA I++ S+ L+ I ++ YA+LVF+Q NP+ FN++I
Sbjct: 23 TQLPQIHAHILRHHLHQ---SNQILSHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMI 79
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL--RQVKGVHSLVVKSKDFN 161
+GY+ G + L++QM G+ PD FT+ LLK+C + ++ VV F
Sbjct: 80 KGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGVHGVVIVVGFE 139
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN-----VVTWTAMINGHVKQKNYREGID 216
+I Y + G ++ A+ +FD+M +++ VV+W +MI G + E ++
Sbjct: 140 RFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDMRDRSVVSWNSMIAGLEQSGRDGEALE 199
Query: 217 LFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND--KLGAALTDM 274
LFR+M D G E ++ T+V++L CA LGA ++G+W+H + ++ +L D +G +L D
Sbjct: 200 LFREMWDHGFEPDDATVVTILPVCARLGAVDVGEWIHSYA-ESSRLLRDFISVGNSLVDF 258
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y KCG +E A RVF + +KNV +WN++I GL +G GE +F +M G++P+D T
Sbjct: 259 YCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATF 318
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+ VL+ C+HAGL+E+G+ +F +M D+K+EP ++H+GC+VDLL R ++EA +++R MP
Sbjct: 319 VGVLSCCAHAGLVERGRNLFTSMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMP 378
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
M PNAVLWGSLL+A + D V+ AE A++ LI+LEP+N GNYVL+SN+YA +WD+
Sbjct: 379 MRPNAVLWGSLLSAYRTIGD---VKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDE 435
Query: 455 AGKMRRLMKERNIVKNPGCSVI 476
K+R LMKE+NI KNPG S++
Sbjct: 436 VEKVRALMKEKNIRKNPGQSMV 457
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 274/436 (62%), Gaps = 9/436 (2%)
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK 139
+AYAH +F+ +P+ F +NT+IRGY+ + I LY M G+ P+S+T+ +L
Sbjct: 16 HVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLN 75
Query: 140 ACGDL-RQVKG--VHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
AC L R +G +HS +VK+ DF + + L LI Y G + A ++FD+M E +
Sbjct: 76 ACCKLLRLCEGQELHSQIVKAGLDFETPL--LNGLIKLYAACGCMDYACVMFDEMPEPDS 133
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
+W+ M++G+ + E + L R+M+ V + TL SV+ C +LG +LGKWVH +
Sbjct: 134 ASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSY 193
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
++K + ++ LG AL MY+KCG ++ AL+VF+ + E++V TW+ +I G AIHG E+A
Sbjct: 194 IDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKA 253
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
+++F M+ S I P+ VT +VL+A SH+GL+EKG +IF M +YK+ P +KHYGC+VD
Sbjct: 254 LQLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVD 313
Query: 376 LLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN 435
L CRA ++ A++ I+ MP+EPN VLW +LL AC + L E +++KL+P +
Sbjct: 314 LFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKG---LGEHISRKILKLDPSS 370
Query: 436 DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
NYV +SN+YA+ +W ++R LMKE+ K G S IEIN +VH+F++G+ HP
Sbjct: 371 PENYVFVSNVYASLGRWSSVCQVRSLMKEKAPKKQHGWSSIEINFMVHKFIMGEESHPKR 430
Query: 496 EEIYSMLEYVAISLRE 511
E+IY ML +A L++
Sbjct: 431 EKIYGMLHQMARKLKQ 446
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 138/277 (49%), Gaps = 9/277 (3%)
Query: 39 KCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFA 98
K L + +++H+QI+KA D T L LI+ + YA ++F+++ P + +
Sbjct: 79 KLLRLCEGQELHSQIVKAGLDFET---PLLNGLIKLYAACGCMDYACVMFDEMPEPDSAS 135
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVV 155
++T++ GY++ G ++L +M + D+FT ++ CGDL + K VHS +
Sbjct: 136 WSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYID 195
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
K V+ T L+ Y G + +A +F M E++V TW+ MI G+ + + +
Sbjct: 196 KEGVKIDVVLG-TALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKAL 254
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV-NKNCIILNDKLGAALTDM 274
LF M+ S + N +T SVLSA ++ G E G + E + + I K + D+
Sbjct: 255 QLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDL 314
Query: 275 YAKCGYIEEALRVFKIV-LEKNVCTWNSIIGGLAIHG 310
+ + G + A + + + +E NV W +++G HG
Sbjct: 315 FCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHG 351
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 2/233 (0%)
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
G V A +F N+ W +I G+ + I L++ M G+ N T VL
Sbjct: 15 GHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVL 74
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
+AC L G+ +H + K + L L +YA CG ++ A +F + E +
Sbjct: 75 NACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSA 134
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
+W++++ G + +G E +K+ +MQ + D TL +V+ C G+++ GK + +
Sbjct: 135 SWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYI 194
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
++ V+ +V LV + + LD A +V + M E + W ++ A
Sbjct: 195 DKE-GVKIDVVLGTALVGMYSKCGSLDNALKVFQGMA-ERDVTTWSIMIAGYA 245
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/458 (40%), Positives = 265/458 (57%), Gaps = 42/458 (9%)
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG-------VHS 152
+ +IR + + H + LY ++ GL P T P LLK+ V G VH+
Sbjct: 41 DALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTVHT 100
Query: 153 LVVKS--KDFNSVIHSLTR-----------------------------LITFYCNFGDVK 181
VK F V ++L R LIT Y G +
Sbjct: 101 HAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLA 160
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
A+ LFD+M +N V+W+AM+NG+V+ + RE + +F +M+ V ++ LV VL+ACA
Sbjct: 161 DARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACA 220
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
GA E GKWVH ++ + I +N G AL DMY+KCG ++ A+ VF+ + KNV W +
Sbjct: 221 QHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTT 280
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+I GLA+HG G EAV +F QM+ SGI+PDD+ I VL AC+HAGL++KG+E+F +M R Y
Sbjct: 281 MIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKY 340
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
++P ++HYGC+VDLL R L EA E+I+ MPMEP+A++WG+L+ C NVE A
Sbjct: 341 GIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHK---NVEFA 397
Query: 422 EIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
E + I LEP G YVL+SNIYAA + A ++R LM+E+ + K PGCS +E+N V
Sbjct: 398 EYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEVNGV 457
Query: 482 VHEFMVGDGRHPCSEEIYSMLEYVAISLR-EECYAARM 518
+H+F+VGD HP ++I S + +R EE Y M
Sbjct: 458 IHQFIVGDLSHPRIKDILSKWYEIDTRIRLEEGYIPDM 495
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 151/326 (46%), Gaps = 20/326 (6%)
Query: 48 QVHAQIIKASFDNRTISDTQLA-------KLIESLVNSSQIAYAHLVFNQIINPSTFAFN 100
+VHA + + D + T A LI + + ++A A +F+++ + +++
Sbjct: 119 RVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWS 178
Query: 101 TVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKS 157
++ GY +AG G ++++ +M + PD +L AC G L Q K VH + K+
Sbjct: 179 AMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYL-KA 237
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
+ T L+ Y G+V+ A +F++M KNV+ WT MI G E + L
Sbjct: 238 HGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVML 297
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE-FVNKNCIILNDKLGAALTDMYA 276
F +M SG+ +++ + VL AC + G + G+ + + V K I + + D+ A
Sbjct: 298 FAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLA 357
Query: 277 KCGYIEEALRVF-KIVLEKNVCTWNSIIGGLAIHGCGE--EAVKMFWQMQMSGIKPDDVT 333
+ G++ EA + K+ +E + W +++ G H E E V W + ++PD
Sbjct: 358 RNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYVAKHWIL----LEPDKSG 413
Query: 334 LIAVLTACSHA-GLIEKGKEIFYNMR 358
+L+ A G +EI + MR
Sbjct: 414 AYVLLSNIYAASGRHASAREIRHLMR 439
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 192/515 (37%), Positives = 290/515 (56%), Gaps = 51/515 (9%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LL++C HL KQ+ A +I +L + + S ++YA +F+ + +
Sbjct: 59 LALLERCIHLNHLKQLQAFLITLGHAQTHFYAFKLLRFCT--LALSNLSYARFIFDHVES 116
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD-PDSFTYPILLKACGDL---RQVKG 149
P+ + + +I YA + LY M+ P+ F YP +LK+C + +
Sbjct: 117 PNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGSARM 176
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNF-GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
VH V++S F T L+ Y F DV+SA+LLFD+MTE+NVV+WTAMI+G+ +
Sbjct: 177 VHCQVLRS-GFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWTAMISGYTRL 235
Query: 209 KN-------------------------------YREGIDLFRKM-------RDSGVEVNE 230
+ E + LFR+M G N+
Sbjct: 236 GQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRPNQ 295
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI 290
+T V LSAC + G LGKW+H +V +N + L+ + AL DMY KCG ++EA RVF
Sbjct: 296 VTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDR 355
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM--SGIKPDDVTLIAVLTACSHAGLIE 348
LE+++ +WNS+I LA+HG + A+ +F +M SG+KPD+VT I +L AC+H GL+E
Sbjct: 356 TLERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHGGLVE 415
Query: 349 KGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
KG F M ++Y +EP ++HYGCLVDLL RA +EA EV+R M +EP+ V+WGSLL
Sbjct: 416 KGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNG 475
Query: 409 CASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIV 468
C + +LAE ++++LI ++P N G ++++NIY +WD+ K+R+++KE+N
Sbjct: 476 CKIH---GHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEVRKVRKVLKEQNAH 532
Query: 469 KNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
K PGCS IEI++ VH+F D HP +EEIY+ LE
Sbjct: 533 KTPGCSWIEIDNQVHQFYSVDKTHPRTEEIYNTLE 567
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 259/393 (65%), Gaps = 11/393 (2%)
Query: 129 PDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYC----NFGDVK 181
P+ FTYP +LKAC G+L K VH V+K F ++ L+ YC G ++
Sbjct: 8 PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKF-GFGDEVNVQNTLVHMYCCCRGGEGGIE 66
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
A+ +FD+M + + V+W+AMI G+V+ + I+LFR+M+ GV +E+T+VSVLSAC
Sbjct: 67 FARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACT 126
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
LGA ELGKWV +V K + N +L AL DM+AKCG +++A +F+ + E+N+ +W S
Sbjct: 127 GLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTS 186
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+IGGLA+HG G EAV +F +M SG+ PDDV I +L+ACSH+GL++KGK F +MR+D+
Sbjct: 187 VIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDF 246
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
+ P ++HYGC+VD+LCRA L+ EA + ++ MP++PN V+W +L+ AC + ++L
Sbjct: 247 SIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAH---GELKLG 303
Query: 422 EIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
E +LI+ EP ++ NYVL+SNIYA + W+ ++R M + + K PG ++IE+++
Sbjct: 304 EKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNE 363
Query: 482 VHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
++EF+ GD H S+EIY M++ + ++ Y
Sbjct: 364 IYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGY 396
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 7/270 (2%)
Query: 47 KQVHAQIIKASF-DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
K VH ++K F D + +T + I +A VF+++ + +++ +I G
Sbjct: 30 KSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFARKVFDEMYKSDSVSWSAMIGG 89
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNS 162
Y G I L+ +M G+ PD T +L AC G L K V S V K + +
Sbjct: 90 YVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKN 149
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
V S LI + GDV A LF M E+N+V+WT++I G E + +F +M
Sbjct: 150 VELS-NALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMV 208
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN-CIILNDKLGAALTDMYAKCGYI 281
SGV +++ + +LSAC++ G + GK + + K+ I+ + + DM + G +
Sbjct: 209 RSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLV 268
Query: 282 EEALR-VFKIVLEKNVCTWNSIIGGLAIHG 310
+EAL+ V ++ ++ N W ++I HG
Sbjct: 269 KEALKFVQEMPIDPNPVVWRTLINACRAHG 298
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/478 (36%), Positives = 292/478 (61%), Gaps = 8/478 (1%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L+ KC + Q+ A IK+ ++ + +T+L S ++YA +F+ + P
Sbjct: 37 LISKCNSERELMQIQAYAIKSHQEDVSF-NTKLINFCTESPTESSMSYARHLFDAMSEPD 95
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHS 152
FN++ RGY+ + L+ +++ + L PD++T+P LLKAC L + + +H
Sbjct: 96 IVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHC 155
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
L +K + ++ LI Y DV +A+ +FD++ E VV + AMI G+ ++
Sbjct: 156 LSMK-LGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPN 214
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E + LFR+M+ ++ NE+TL+SVLS+CA LG+ +LGKW+HE+ K+ K+ AL
Sbjct: 215 EALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALI 274
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
DM+AKCG +++A+ +F+ + K+ W+++I A HG E ++ MF +M+ ++PD++
Sbjct: 275 DMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEI 334
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
T + +L ACSH GL+E+G+E F M ++ + P++KHYG +VDLL RA L++AYE I
Sbjct: 335 TFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDK 394
Query: 393 MPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQW 452
+P+ P +LW LL AC+S + N+ELAE ER+++L+ + G+YV++SN+YA +W
Sbjct: 395 LPISPTPMLWRILLAACSSHN---NLELAEKVSERILELDDSHGGDYVILSNLYARNKKW 451
Query: 453 DDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+ +R++MK+R VK PGCS IE+N+VVHEF GDG + +++ L+ + L+
Sbjct: 452 EAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELK 509
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 196/535 (36%), Positives = 315/535 (58%), Gaps = 59/535 (11%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLI-ESLVNSSQIAYAHLVFNQII 92
P + C + Q+HA IK+ T++ ++ + S ++ + YAH +FNQ+
Sbjct: 20 FPQINTCRTIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 79
Query: 93 NPSTFAFNTVIRGYAEAGLGHR--GIQLYTQMIGNG-LDPDSFTYPILLKAC---GDLRQ 146
+ F++NT+IRG++E+ I L+ +M+ + ++P+ FT+P +LKAC G ++Q
Sbjct: 80 QRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQ 139
Query: 147 VKGVHSLVVK----SKDFNSVIHSLTRL-----------ITFYCN--------------- 176
K +H L +K +F V+ +L R+ + FY N
Sbjct: 140 GKQIHGLALKYGFGGDEF--VMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKR 197
Query: 177 ----------------FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
GD K+A++LFD+M +++VV+W MI+G+ + +++ +++FR+
Sbjct: 198 DGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFRE 257
Query: 221 MRDS-GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
M+ + N +TLVSVL A + LG+ ELG+W+H + + I ++D LG+AL DMY+KCG
Sbjct: 258 MKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 317
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
IE+A+ VF+ + +NV TW+++I G AIHG +A+ F +M+ +G++P DV I +LT
Sbjct: 318 IIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 377
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSHAGL+E+G+ F M +EP ++HYGC+VDLL R LLDEA E I NMP++P+
Sbjct: 378 ACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDD 437
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
V+W +LL AC NVE+ + L+ + P + G YV +SN+YA++ W + +MR
Sbjct: 438 VIWKALLGACRMH---RNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMR 494
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
MKE +I K+PGCS I+I+ V+HEF+V D HP ++EI SML ++ LR Y
Sbjct: 495 LRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLAGY 549
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 199/554 (35%), Positives = 302/554 (54%), Gaps = 61/554 (11%)
Query: 6 VPNSQLTHFTNSANSHKNSNTAT-------KSHHHLP-------LLQKCTHLVQFKQVHA 51
+P Q + S + +SNT++ S LP LL+K L Q KQ+HA
Sbjct: 17 IPRLQEPFYVQSPLVYISSNTSSAIWEPSGTSSFSLPSHSTFVQLLKKRPSLTQIKQIHA 76
Query: 52 QIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN-PSTFAFNTVIRGYAEAG 110
Q++ T + L LI S + +++A +VF+Q + P T +N +I+ Y++
Sbjct: 77 QVVTHGLAQNT---SLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKTP 133
Query: 111 LGHRGIQLYTQMIGNG--LDPDSFTYPILLKACGDLRQVKG----VHSLVVKSKDFNSVI 164
+ L+ QM+ +G D +T+ + AC ++G VH +VVK + S I
Sbjct: 134 SSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKD-GYESDI 192
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA------------------------ 200
L+ Y F + A+ +FD+M +++V+TWT+
Sbjct: 193 FVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGR 252
Query: 201 -------MINGHVKQKNYREGIDLFRKMR-DSGVEVNELTLVSVLSACANLGASELGKWV 252
M+ G+V + Y E + F M V+ NE LVS+LSACA+LGA + GKW+
Sbjct: 253 NDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWI 312
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG 312
H +++KN I+L+ + AL DMYAKCG I+ A RVF + ++++ TW S+I GL++HG G
Sbjct: 313 HVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLG 372
Query: 313 EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC 372
E + F +M G KPDD+TL+ VL CSH+GL+E+G IF++M + + P ++HYGC
Sbjct: 373 AECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGC 432
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLE 432
L+DLL RA L+ A+E I++MPMEP+ V W +LL+AC D V+L E + + +L
Sbjct: 433 LIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGD---VDLGERIINHIAELC 489
Query: 433 P-FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
P + G YVL+SN+YA+ QW+ K+R+ M +R PGCS IEI+ VVHEF+ D
Sbjct: 490 PGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCSWIEIDGVVHEFLAADKL 549
Query: 492 HPCSEEIYSMLEYV 505
HP EI L V
Sbjct: 550 HPRISEINKKLNEV 563
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 183/481 (38%), Positives = 290/481 (60%), Gaps = 20/481 (4%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS----TFAFNTVI 103
Q+H+ I+K + + T+ A S N+ A + L N P F FNT+I
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAA-TSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLI 198
Query: 104 RGYAEAGLGH-RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKD 159
R +A+ ++ Y M + + P+ FT+P +LKAC + +++ VH+ +VK
Sbjct: 199 RAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKF-G 257
Query: 160 FNSVIHSLTRLITFYC------NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYRE 213
F H L+ YC + G V SA+ +FD+ K+ VTW+AMI G+ + N
Sbjct: 258 FEEDPHVRNTLVHMYCCCCQDGSSGPV-SAKKVFDESPVKDSVTWSAMIGGYARAGNSAR 316
Query: 214 GIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTD 273
+ LFR+M+ +GV +E+T+VSVLSACA+LGA ELGKW+ ++ + I+ + +L AL D
Sbjct: 317 AVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALID 376
Query: 274 MYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVT 333
M+AKCG ++ A++VF+ + + + +W S+I GLA+HG G EAV +F +M G+ PDDV
Sbjct: 377 MFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVA 436
Query: 334 LIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
I VL+ACSH+GL++KG F M + + P ++HYGC+VD+L RA ++EA E +R M
Sbjct: 437 FIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAM 496
Query: 394 PMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWD 453
P+EPN V+W S++TAC + + ++L E + LI+ EP ++ NYVL+SNIYA +W+
Sbjct: 497 PVEPNQVIWRSIVTACHARGE---LKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWE 553
Query: 454 DAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREEC 513
K+R +M + + K PG ++IE+N+ ++EF+ GD H +EIY M+E + ++
Sbjct: 554 KKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAG 613
Query: 514 Y 514
Y
Sbjct: 614 Y 614
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 189/529 (35%), Positives = 297/529 (56%), Gaps = 27/529 (5%)
Query: 5 LVPNSQLTHFT-NSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTI 63
L+PNS F S K S + H H+ L L VH +I N +
Sbjct: 59 LLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLY----VHTSLISMYVQNERL 114
Query: 64 SDTQ-------------LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAG 110
D L+ + I A +F++I ++N +I GY E G
Sbjct: 115 EDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETG 174
Query: 111 LGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSL 167
++L+ +M+ + PD T ++ A G + + VHS + F S + +
Sbjct: 175 NYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIA-DHGFGSNLKIV 233
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
LI FY G++++A LF ++ K+V++W +I G+ Y+E + LF++M SG
Sbjct: 234 NALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGES 293
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNC--IILNDKLGAALTDMYAKCGYIEEAL 285
N++T++S+L ACA+LGA ++G+W+H +++K + L +L DMY+KCG IE A
Sbjct: 294 PNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAH 353
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
+VF +L K++ WN++I G A+HG A +F +M+ + IKPDD+T + +L+ACSHAG
Sbjct: 354 QVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAG 413
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
+++ G+ IF +M +YK+ P ++HYGC++DLL + L EA E+I M MEP+ V+W SL
Sbjct: 414 MLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSL 473
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L AC NVEL E + L K+EP N G+YVL+SNIYA +W++ ++R L+ ++
Sbjct: 474 LKACKMH---GNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDK 530
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ K PGCS IEI+ VVHEF++GD HP + EIY MLE + + L+E +
Sbjct: 531 GMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGF 579
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 201/370 (54%), Gaps = 38/370 (10%)
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
+ YA VF I P+ +NT+ RG+A + ++LY MI GL P+S+T+P LLK+
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72
Query: 141 CGDLRQVK---GVHSLVVK--------------------------SKDFNSVIH----SL 167
C L+ K +H V+K K F+ H S
Sbjct: 73 CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
T L+T Y + G ++SA+ +FD++ K+VV+W AMI+G+V+ NY+E ++LF++M + V
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+E T+V+V+SA A G+ ELG+ VH ++ + N K+ AL D Y+KCG +E A +
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
F + K+V +WN +IGG +EA+ +F +M SG P+DVT++++L AC+H G I
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312
Query: 348 EKGKEIFYNMRRDYKVEPNVKHY-GCLVDLLCRARLLDEAYEVIRNMPMEP----NAVLW 402
+ G+ I + + K N L+D+ + ++ A++V +M + NA+++
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIF 372
Query: 403 GSLLTACASA 412
G + A+A
Sbjct: 373 GFAMHGRANA 382
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 32/242 (13%)
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
+F + A +F+ + E N++ W M GH + + L+ M G+ N T
Sbjct: 9 HFEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPF 68
Query: 236 VLSACANLGASELGKWVHEFVNK--------------NCIILNDKLG------------- 268
+L +CA L AS+ G +H V K + + N++L
Sbjct: 69 LLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRD 128
Query: 269 ----AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
AL YA GYIE A +F + K+V +WN++I G G +EA+++F +M
Sbjct: 129 VVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK 188
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
+ ++PD+ T++ V++A + +G IE G+++ ++ D+ N+K L+D + ++
Sbjct: 189 TNVRPDESTMVTVISASARSGSIELGRQV-HSWIADHGFGSNLKIVNALIDFYSKCGEME 247
Query: 385 EA 386
A
Sbjct: 248 TA 249
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 189/528 (35%), Positives = 305/528 (57%), Gaps = 42/528 (7%)
Query: 20 SHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQ--LAKLIESLVN 77
S+ N N + LLQKC L + KQ+H + + S Q KL+ +
Sbjct: 244 SYTNRNAHMNTQTFYFLLQKCGSLEKLKQIHGKAVTLGL---LCSKRQHLACKLLNTYTQ 300
Query: 78 SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPIL 137
A VFN I NP ++ +I Y + +++ + +GL PDSF
Sbjct: 301 LGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGA 360
Query: 138 LKACG---DLRQVKGVHSLV--------------------------VKSKDFNSV----I 164
+ ACG DL + VH +V V F ++ +
Sbjct: 361 VSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDV 420
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
S T L+ + D+++A+ +FD+M +N V+WTAMI G+V+ + G++LF++MR
Sbjct: 421 SSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAE 480
Query: 225 GVE-VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
G + +T+V+VLS CA++GA +LG VH +VNK + L+ + AL DMYAK G +
Sbjct: 481 GKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVL 540
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
AL++F+ + +++V +W ++I GLA+HG G A++ F M SG P++VTL++VL+ACSH
Sbjct: 541 ALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSH 600
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
AGL+ +G+ +F M + + ++P ++HYGC+VDLL RA LL EA E+I +MP++P++V+W
Sbjct: 601 AGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWR 660
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
SLL+AC N+ LAE+A + +I+LEP +DG Y+L+ NIY + ++W+DA K R+ M+
Sbjct: 661 SLLSACLVH---GNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMR 717
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
+R + K PGCS +E+N VVHEF+ D H ++Y++LE + +++
Sbjct: 718 DRRVKKKPGCSWVEVNGVVHEFLAEDAVHCIRADVYTVLEAITEQMKD 765
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/435 (39%), Positives = 266/435 (61%), Gaps = 7/435 (1%)
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL 127
L LI + + AH++F+ + A+N +I GY + G ++++ M+
Sbjct: 209 LNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRA 268
Query: 128 DPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHS---LTRLITFYCNFGDVKSAQ 184
D T + ACG L + + + + ++ S T L+ Y G++ A+
Sbjct: 269 PFDEVTLLSVATACGRLGDAN-LGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKAR 327
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
LFD+M ++VV W+AMI+G+ + RE + +F +M+ + V N++T+VSVLSACA LG
Sbjct: 328 RLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLG 387
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
A E GKWVH ++ + + L LG AL D YAKCG I++A++ F+ + +N TW ++I
Sbjct: 388 ALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIK 447
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVE 364
G+A +G EA+++F M + I+P DVT I VL ACSH L+E+G+ F +M +DY +
Sbjct: 448 GMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGIC 507
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIA 424
P ++HYGC+VDLL RA L+DEAY+ IRNMP+EPNAV+W +LL+AC NVE+ E A
Sbjct: 508 PRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHK---NVEIGEEA 564
Query: 425 MERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHE 484
+++++ L+P + GNY+L+SN YA+ QW +A +R+ MKE+ + K PGCS+IE+ + E
Sbjct: 565 LKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFE 624
Query: 485 FMVGDGRHPCSEEIY 499
F D HP EIY
Sbjct: 625 FFAEDSEHPQLTEIY 639
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 134/322 (41%), Gaps = 19/322 (5%)
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC------GDLRQVKGVHSLVVKSKDFN 161
E R + L T+M L P + LR V +H+ ++KS
Sbjct: 34 EMATAKRRLHLRTRMAATALPAARLPAPGMPSPARQTPRRAALRDVPQLHATLLKSGAMT 93
Query: 162 SVIHSL-TRLITFYCNFGDVKSAQLLF-------DQMTEKNVVTWTAMINGHVKQKNYRE 213
+ S + L SA L + ++ ++ +I ++ + +
Sbjct: 94 TSPDSFHSLLEAAALPAPATSSAHLSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPED 153
Query: 214 GIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
+ LF +M D+ V ++ T+ + + +C+ + +G+ V + K +++ + +L
Sbjct: 154 ALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLI 213
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
MYA CG + A +F V K V WN++I G +G +E V+MF M D+V
Sbjct: 214 HMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEV 273
Query: 333 TLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
TL++V TAC G G+ I Y + N+ LVD+ + LD+A +
Sbjct: 274 TLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA--TALVDMYAKCGELDKARRLFD 331
Query: 392 NMPMEPNAVLWGSLLTACASAD 413
M + V W ++++ +D
Sbjct: 332 RMHSR-DVVAWSAMISGYTQSD 352
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 181/502 (36%), Positives = 294/502 (58%), Gaps = 39/502 (7%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+Q+H ++K T L ++ + Q+ A VF+ +N +I Y
Sbjct: 138 RQLHGHVLKHGLQYNVFVHTALVQM---YLLCGQLDTARGVFDVCPKADVITWNMIISAY 194
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSK----- 158
+ G +L+ M + P + T ++L AC DLR K VHS V K
Sbjct: 195 NKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNL 254
Query: 159 -------DF------------------NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
D N I S T +++ + N G++ A+ FD+M EK
Sbjct: 255 VLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK 314
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
+ V+WTAMI+G+++ ++E ++LFR M+ + V+ +E T+VSVL+ACA+LGA ELG+W+
Sbjct: 315 DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR 374
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
++++N I + + AL DMY KCG +++A +F+ + +++ TW ++I GLA++G GE
Sbjct: 375 TYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 434
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
+A+ MF M + I PD++T I VL+AC+H GL++KG++ F M + +EPN+ HYGCL
Sbjct: 435 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 494
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
VDLL RA L EAYEVI NMP++ N+++WG+LL C + ++AE+ ++++++LEP
Sbjct: 495 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRES---DMAEMVVKQILELEP 551
Query: 434 FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHP 493
N YVL+ NIYAA +W+D ++R++M ++ I K PGCS+IE+N VHEF+ GD HP
Sbjct: 552 DNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHP 611
Query: 494 CSEEIYSMLEYVAISLREECYA 515
++ I + L+ + L+ Y+
Sbjct: 612 QTKNIDAKLDKMTQDLKLAGYS 633
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 214/436 (49%), Gaps = 50/436 (11%)
Query: 15 TNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIES 74
T +A S + + +H + LL+ C + Q +QVH Q IK + + ++ +
Sbjct: 3 TIAATSSALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCT 62
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
YA +F++I P+ F +NT+IRGY+ G+ LY +M+ G+ PD +T+
Sbjct: 63 H-EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTF 121
Query: 135 PILLKACGDLRQV-----KGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
P L K G R + + +H V+K +N +H T L+ Y G + +A+ +FD
Sbjct: 122 PFLFK--GFTRDIALEYGRQLHGHVLKHGLQYNVFVH--TALVQMYLLCGQLDTARGVFD 177
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
+ +V+TW +I+ + K + E LF M D V +TLV VLSAC+ L
Sbjct: 178 VCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRT 237
Query: 249 GKWVHEFVNKNCII-LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
GK VH +V KNC + N L A+ DMYA CG ++ AL +F+ + +++ +W +I+ G
Sbjct: 238 GKKVHSYV-KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT 296
Query: 308 IHGCGE---------------------------------EAVKMFWQMQMSGIKPDDVTL 334
GE EA+++F MQ + +KPD+ T+
Sbjct: 297 --NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTM 354
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
++VLTAC+H G +E G+ I + R+ K++ ++ L+D+ + +D+A + R M
Sbjct: 355 VSVLTACAHLGALELGEWIRTYIDRN-KIKNDLFVRNALIDMYFKCGDVDKAESIFREMS 413
Query: 395 MEPNAVLWGSLLTACA 410
+ + W +++ A
Sbjct: 414 -QRDKFTWTAMIVGLA 428
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 167/339 (49%), Gaps = 13/339 (3%)
Query: 133 TYPI--LLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN--FGDVKSAQLLFD 188
T+P+ LL+ C + Q++ VH +K K N+ R++TF C +GD + A+ LFD
Sbjct: 18 THPLISLLETCESMDQLQQVHCQAIK-KGLNANPVLQNRVMTFCCTHEYGDFQYARRLFD 76
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
++ E N+ W MI G+ + + G+ L+ +M GV+ + T + A E
Sbjct: 77 EIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEY 136
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G+ +H V K+ + N + AL MY CG ++ A VF + + +V TWN II
Sbjct: 137 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 196
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
G EE+ ++F M+ + P VTL+ VL+ACS + GK++ ++ ++ KVE N+
Sbjct: 197 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKV-HSYVKNCKVESNLV 255
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
++D+ +D A + R+M + + W ++++ N+ ++A
Sbjct: 256 LENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGF------TNLGEIDVARNYF 308
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
K+ + ++ M + Y ++ +A ++ R M+ N+
Sbjct: 309 DKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNV 347
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 77/196 (39%), Gaps = 11/196 (5%)
Query: 24 SNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK--LIESLVNSSQI 81
+N + +L C HL + + I+ D I + + LI+ +
Sbjct: 345 TNVKPDEFTMVSVLTACAHLGALEL--GEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDV 402
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
A +F ++ F + +I G A G G + + +++ M+ + PD TY +L AC
Sbjct: 403 DKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSAC 462
Query: 142 GDLRQVKGVHSLVVKSKDFNSVIHSLTR---LITFYCNFGDVKSAQLLFDQMTEK-NVVT 197
V ++ + + ++ L+ G +K A + + M K N +
Sbjct: 463 THTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIV 522
Query: 198 WTAMINGHVKQKNYRE 213
W A++ G + YRE
Sbjct: 523 WGALLAG---CRVYRE 535
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 173/454 (38%), Positives = 280/454 (61%), Gaps = 11/454 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI ++ A VF++I ++N++I GY+ G + L+ +M G +PD
Sbjct: 167 LITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPD 226
Query: 131 SFTYPILLKACGDLRQV---KGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLL 186
T +L ACGDL + + VV+++ D NS + S LI Y GD+ SA+ +
Sbjct: 227 EMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGS--ALIGMYGKCGDLSSARRV 284
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD+M +K+VVTW AMI G+ + E I LF MR+SGV +++TLV VLSACA++GA
Sbjct: 285 FDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGAL 344
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
+ GKW+ + ++ + + + AL DMYAKCG +++ALRVF+ + +KN +WN++I L
Sbjct: 345 DFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISAL 404
Query: 307 AIHGCGEEAVKMFWQMQMSG--IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVE 364
A HG +E++ +F +M G ++P+D++ I VL+AC HAGL+++G+++F M + +
Sbjct: 405 AFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLV 464
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIA 424
P ++H+ C+VDLL RA + EA++ I MP +P+ V+ G+LL AC NV+++E
Sbjct: 465 PKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKR---RNVDVSERV 521
Query: 425 MERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHE 484
M L+++EP N GNY++ S I+A +WDD+ +MR LM++R + K PGCS IEI + VHE
Sbjct: 522 MHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWIEIENQVHE 581
Query: 485 FMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
F GD H S+++ ++ + ++ E Y ++
Sbjct: 582 FHAGDVLHFISQDMCQVINLLNEEMKVEGYGPKV 615
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/403 (34%), Positives = 225/403 (55%), Gaps = 16/403 (3%)
Query: 13 HFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLI 72
HFT + + T + L LL++CT +Q+H Q+I + L+
Sbjct: 14 HFTKALAKSQRHAQQTLTDKLLSLLKQCTSTKSLQQIHTQMIINAIHKPNF-------LL 66
Query: 73 ESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHR-GIQLYTQMIGNGLDPDS 131
++ A L+F+QI P+ +AFN +IRG I+ Y QM G+ P++
Sbjct: 67 HRFIDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNN 126
Query: 132 FTYPILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
FTYP + AC +L + HS V+KS + H LIT Y G++ A+ +FD
Sbjct: 127 FTYPFVFIACANLLVLNHGQCAHSGVLKSG-LCADGHVRHSLITMYSRCGELGCARRVFD 185
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
+++EK++V+W +MI+G+ + + + LF +MRD+G E +E+TLVS+L AC +LG L
Sbjct: 186 EISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGL 245
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G W+ FV +N + LN +G+AL MY KCG + A RVF +++K+V TWN++I G A
Sbjct: 246 GSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQ 305
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNV 367
+G +EA+ +F M+ SG+ PD +TL+ VL+AC+ G ++ GK + Y R ++ ++
Sbjct: 306 NGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASER--GLQNDI 363
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
L+D+ + LD+A V +MP + N V W ++++A A
Sbjct: 364 YVSTALIDMYAKCGSLDDALRVFEDMP-QKNEVSWNAMISALA 405
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 174/466 (37%), Positives = 282/466 (60%), Gaps = 10/466 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
++H+ ++KA +D+ T L L V A VF+ I + + ++ +I GY
Sbjct: 135 KIHSLLVKAGYDHDVFVKTSLLSL---YVKCDNFDDALKVFDDIPDKNVVSWTAIITGYI 191
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVI 164
+G I + +++ GL PDSF+ +L AC GD + + + S +V
Sbjct: 192 SSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVF 251
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
+ T L+ Y G+++ A L+F M EK++V+W+ MI G+ ++ +DLF +M+
Sbjct: 252 VA-TSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSE 310
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
++ + T+V VLSACA LGA +LG W +++N + N LG AL DMY+KCG + +A
Sbjct: 311 NLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQA 370
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
+F + +K+ WN+++ GL+++G + +F ++ GI+PD+ T I +L C+H
Sbjct: 371 WEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHG 430
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
G + +G++ F NM+R + + P+++HYGC+VDLL RA LL+EA+++I NMPM+PNAV+WG+
Sbjct: 431 GFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGA 490
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL C D LAE +++LI+LEP+N GNYV +SNIY+ +W++A K+R MKE
Sbjct: 491 LLGGCKLHKD---THLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKE 547
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+ I K CS IEI+ +VHEF+VGD H SE+IY+ L+ + L+
Sbjct: 548 QQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELK 593
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 206/368 (55%), Gaps = 11/368 (2%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESL-VNSSQIAYAHLVFNQIINPSTFAFNTVI 103
Q K +HA++++ D D L LI ++ Y+ LVF+Q+ P+ F +NT+I
Sbjct: 31 QLKHIHARLLRLHLDQ----DNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMI 86
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDF 160
RG I LY M G G P++FT P +LKAC D+R +HSL+VK+ +
Sbjct: 87 RGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKA-GY 145
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
+ + T L++ Y + A +FD + +KNVV+WTA+I G++ ++RE I F+K
Sbjct: 146 DHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKK 205
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
+ + G++ + +LV VL+ACA LG G+W+ +++ + + N + +L DMY KCG
Sbjct: 206 LLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGN 265
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
+E A +F + EK++ +W+++I G A +G ++A+ +F+QMQ +KPD T++ VL+A
Sbjct: 266 LERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSA 325
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
C+ G ++ G M R+ + N L+D+ + + +A+E+ M + + V
Sbjct: 326 CATLGALDLGIWASSLMDRN-EFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-KKDRV 383
Query: 401 LWGSLLTA 408
+W +++
Sbjct: 384 VWNAMMVG 391
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 180/517 (34%), Positives = 302/517 (58%), Gaps = 47/517 (9%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
L+ C +VHA ++ S + TQ+ L + ++A+A VF+Q+ P+
Sbjct: 20 LRACASFRDLLRVHAHAVRLSLSQSSYLATQIVHLCNA---HGRVAHATRVFSQVREPNL 76
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP-------DSFTYPILLKACGDLRQV-- 147
N +I+ YA+ I +Y +M+ P D FTYP LLKACG L +
Sbjct: 77 HLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACGGLMALDL 136
Query: 148 -KGVHSLVVKSK------DFNSVIHSLTR------------------------LITFYCN 176
K VH VV+S NS+I TR +I+ +
Sbjct: 137 GKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSWNTVISAHAR 196
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
G ++ A+ +F+ M +K VV+WTA+++G+ ++ ++ FR M+ G E +++++V+V
Sbjct: 197 LGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFEPDDVSIVAV 256
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
L ACA LGA ELG+W++ + N++ ++ + AL +MYAKCG I++AL++F + EK+V
Sbjct: 257 LPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQLFNGMAEKDV 316
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
+W++++GGLA HG +EAV++F +M+ G +KP+ +T + +L+ACSHAGL+++G + F
Sbjct: 317 ISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAGLLDEGLDYFD 376
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
M Y +EP V+HYGC+VDLLCR+ + ++I +MP+ +A +WGS+L AC S D
Sbjct: 377 RMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSVLNACRSHGD- 435
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
V+ A +A ERL+ LEP + GN V+++N+YAA +W + R+ ++ R++ K PGCS+
Sbjct: 436 --VDTAVLAAERLVALEPEDVGNLVMLANVYAAARRWSEVANTRKAIRSRSMRKTPGCSL 493
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
IE+++VV EF+ G+ P + +L+ +A L ++
Sbjct: 494 IEVDNVVQEFVAGEDLKPEFGGLSGVLDILASQLADD 530
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 188/512 (36%), Positives = 295/512 (57%), Gaps = 44/512 (8%)
Query: 30 SHHHLPLLQK-CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF 88
+H L +LQ CT + F Q++ IIK I+ T+ S S I YA+ +F
Sbjct: 27 NHPCLTMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALTFCAS--PSGNINYAYKLF 84
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV- 147
++ NP+ +++NT+IR ++ + I L+ M+ + + P TYP + KA L
Sbjct: 85 VRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAH 144
Query: 148 --KGVHSLVVK----SKDF--NSVIH----------------------------SLTRLI 171
+H VVK + F N++I+ ++ +I
Sbjct: 145 YGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMI 204
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
Y G++ ++ LFD M + V+W +MI+G+V+ E ++LF KM+ G EV+E
Sbjct: 205 MGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEF 264
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
T+VS+L+ACA+LGA + GKWVH+++ +N LN + A+ DMY KCG +E A+ VF+
Sbjct: 265 TMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETC 324
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKG 350
+ + WNSII GLA++G EA + F +++ S +KPD V+ I VLTAC H G I K
Sbjct: 325 PRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKA 384
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
++ F M Y++EP++KHY C+VD+L +A LL+EA E+I+ MP++P+A++WGSLL++C
Sbjct: 385 RDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCR 444
Query: 411 SADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN 470
NV++A A +R+ +L P + YVLMSN++AA ++++A + R LMKE K
Sbjct: 445 KHR---NVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKE 501
Query: 471 PGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
PGCS IE+ VHEF+ G HP ++EIY +L
Sbjct: 502 PGCSSIELYGEVHEFIAGGRLHPKTQEIYHLL 533
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 174/466 (37%), Positives = 281/466 (60%), Gaps = 10/466 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
++H+ ++KA +D+ T L L V A VF+ I + + ++ +I GY
Sbjct: 135 KIHSLLVKAGYDHDVFVKTSLLSL---YVKCDNFDDALKVFDDIPDKNVVSWTAIITGYI 191
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVI 164
+G I + +++ GL PDSF+ +L AC GD + + + S +V
Sbjct: 192 SSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVF 251
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
+ T L+ Y G+++ A L+F M EK++V+W+ MI G+ ++ +DLF +M+
Sbjct: 252 VA-TSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSE 310
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
++ + T+V VLSACA LGA +LG W +++N + N LG AL DMY+KCG + +A
Sbjct: 311 NLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQA 370
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
+F + K+ WN+++ GL+++G + +F ++ GI+PD+ T I +L C+H
Sbjct: 371 WEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHG 430
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
G + +G++ F NM+R + + P+++HYGC+VDLL RA LL+EA+++I NMPM+PNAV+WG+
Sbjct: 431 GFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGA 490
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL C D LAE +++LI+LEP+N GNYV +SNIY+ +W++A K+R MKE
Sbjct: 491 LLGGCKLHKD---THLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKE 547
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+ I K CS IEI+ +VHEF+VGD H SE+IY+ L+ + L+
Sbjct: 548 QQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELK 593
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 206/368 (55%), Gaps = 11/368 (2%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESL-VNSSQIAYAHLVFNQIINPSTFAFNTVI 103
Q K +HA++++ D D L LI ++ Y+ LVF+Q+ P+ F +NT+I
Sbjct: 31 QLKHIHARLLRLHLDQ----DNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMI 86
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDF 160
RG I LY M G G P++FT P +LKAC D+R +HSL+VK+ +
Sbjct: 87 RGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKA-GY 145
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
+ + T L++ Y + A +FD + +KNVV+WTA+I G++ ++RE I F+K
Sbjct: 146 DHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKK 205
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
+ + G++ + +LV VL+ACA LG G+W+ +++ + + N + +L DMY KCG
Sbjct: 206 LLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGN 265
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
+E A +F + EK++ +W+++I G A +G ++A+ +F+QMQ +KPD T++ VL+A
Sbjct: 266 LERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSA 325
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
C+ G ++ G M R+ + N L+D+ + + +A+E+ M + + V
Sbjct: 326 CATLGALDLGIWASSLMDRN-EFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRK-DRV 383
Query: 401 LWGSLLTA 408
+W +++
Sbjct: 384 VWNAMMVG 391
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 189/519 (36%), Positives = 300/519 (57%), Gaps = 22/519 (4%)
Query: 14 FTNSANSHKNSNTATKSHHHL-PLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLI 72
F+ N S+TA H + L + C+ + Q KQ+HA ++ ++ + K++
Sbjct: 88 FSRIPNLKYGSSTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKIL 147
Query: 73 ESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA-EAGLGHRGIQLYTQMIGNG-LDPD 130
+ + S + YA VF+ I N S+F +NT+IR A + LY +M+ G PD
Sbjct: 148 QLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPD 207
Query: 131 SFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T+P +LKAC + K VH +VK F ++ LI Y + G + A+ +F
Sbjct: 208 KHTFPFVLKACAYIFGFSEGKQVHCQIVK-HGFGGDVYVNNGLIHLYGSCGCLDLARKVF 266
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
D+M E+++V+W +MI+ V+ Y + LFR+M+ S E + T+ SVLSACA LG+
Sbjct: 267 DEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLS 325
Query: 248 LGKWVHEFVNKNC---IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
LG W H F+ + C + ++ + +L +MY KCG + A +VF+ + ++++ +WN++I
Sbjct: 326 LGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMIL 385
Query: 305 GLAIHGCGEEAVKMFWQM--QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
G A HG EEA+ F +M + ++P+ VT + +L AC+H G + KG++ F M RDY
Sbjct: 386 GFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYC 445
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
+EP ++HYGC+VDL+ RA + EA +++ +MPM+P+AV+W SLL AC GA+VEL+E
Sbjct: 446 IEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKK--GASVELSE 503
Query: 423 IAMERLIKLEPFND-------GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
+I + N+ G YVL+S +YA+ ++W+D G +R+LM E I K PGCS
Sbjct: 504 EIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSS 563
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
IEIN + HEF GD HP +++IY L+ + LR Y
Sbjct: 564 IEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGY 602
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 185/499 (37%), Positives = 293/499 (58%), Gaps = 21/499 (4%)
Query: 33 HLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
H +LQ C+ + Q KQ+HA ++ ++ + K+++ + S + YA VF+ I
Sbjct: 28 HATVLQTCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 87
Query: 93 NPSTFAFNTVIRGYA-EAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKACG---DLRQV 147
N S+F +NT+IR A + LY +M+ G PD T+P +LKAC +
Sbjct: 88 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 147
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
K VH +VK F ++ LI Y + G + A+ +FD+M E+++V+W +MI+ V+
Sbjct: 148 KQVHCQIVK-HGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 206
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC---IILN 264
Y + LFR+M+ S E + T+ SVLSACA LG+ LG W H F+ + C + ++
Sbjct: 207 FGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 265
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-- 322
+ +L +MY KCG + A +VF+ + ++++ +WN++I G A HG EEA+ F +M
Sbjct: 266 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 325
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
+ ++P+ VT + +L AC+H G + KG++ F M RDY +EP ++HYGC+VDL+ RA
Sbjct: 326 KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGY 385
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFND------ 436
+ EA +++ +MPM+P+AV+W SLL AC GA+VEL+E +I + N+
Sbjct: 386 ITEAIDMVMSMPMKPDAVIWRSLLDACCKK--GASVELSEEIARNIIGTKEDNESSNGNC 443
Query: 437 -GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
G YVL+S +YA+ ++W+D G +R+LM E I K PGCS IEIN + HEF GD HP +
Sbjct: 444 SGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQT 503
Query: 496 EEIYSMLEYVAISLREECY 514
++IY L+ + LR Y
Sbjct: 504 KQIYQQLKVIDDRLRSIGY 522
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 292/499 (58%), Gaps = 40/499 (8%)
Query: 39 KCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFA 98
+C+ + + KQ+HA +IK + T++ +++ L + S YA+LVF +I + + F
Sbjct: 34 RCSTMRELKQIHANLIKTGLISDTVAASRV--LAFCCASPSDRNYAYLVFTRINHKNPFV 91
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNG--LDPDSFTYPILLKACGDL---RQVKGVHSL 153
+NT+IRG++ + I ++ M+ + + P TYP + KA L R + +H
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARDGRQLHGR 151
Query: 154 VVK------SKDFNSVIHSLT---------RLITFYCNF---------------GDVKSA 183
V+K S N+++H RL F G + A
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAKCGLIDQA 211
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
Q LFD+M ++N V+W +MI+G V+ +++ +++FR+M++ V+ + T+VS+L+ACA L
Sbjct: 212 QKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLNACAYL 271
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
GASE G+W+H+++ +N LN + AL DMY KCG EE L+VF+ K + WNS+I
Sbjct: 272 GASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPTKQLSCWNSMI 331
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
GLA +GC E A+ +F +++ +G++PD V+ I VLTAC+H+G + K E F MR Y +
Sbjct: 332 LGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMREKYMI 391
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
EP++KHY C+V++L A LLDEA +I+ MP+E + ++W SLL AC NVE+A+
Sbjct: 392 EPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVEGDTIIWSSLLAAC---RKNGNVEMAKR 448
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVH 483
A L L+P YVLMSN YA+ +++A + R LMKER + K GCS IE++ VH
Sbjct: 449 AANCLKNLDPDETCGYVLMSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVH 508
Query: 484 EFMVGDGRHPCSEEIYSML 502
EF+ +HP S EIYS+L
Sbjct: 509 EFVSCGKKHPKSTEIYSLL 527
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 181/502 (36%), Positives = 294/502 (58%), Gaps = 39/502 (7%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+Q+H ++K T L ++ + Q+ A VF+ +N +I Y
Sbjct: 159 RQLHGHVLKHGLQYNVFVHTAL---VQMYLLCGQLDTARGVFDVCPKADVITWNMIISAY 215
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSK----- 158
+ G +L+ M + P + T ++L AC DLR K VHS V K
Sbjct: 216 NKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNL 275
Query: 159 -------DF------------------NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
D N I S T +++ + N G++ A+ FD+M EK
Sbjct: 276 VLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK 335
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
+ V+WTAMI+G+++ ++E ++LFR M+ + V+ +E T+VSVL+ACA+LGA ELG+W+
Sbjct: 336 DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR 395
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
++++N I + + AL DMY KCG +++A +F+ + +++ TW ++I GLA++G GE
Sbjct: 396 TYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 455
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
+A+ MF M + I PD++T I VL+AC+H GL++KG++ F M + +EPN+ HYGCL
Sbjct: 456 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 515
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
VDLL RA L EAYEVI NMP++ N+++WG+LL C + ++AE+ ++++++LEP
Sbjct: 516 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRES---DMAEMVVKQILELEP 572
Query: 434 FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHP 493
N YVL+ NIYAA +W+D ++R++M ++ I K PGCS+IE+N VHEF+ GD HP
Sbjct: 573 DNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHP 632
Query: 494 CSEEIYSMLEYVAISLREECYA 515
++ I + L+ + L+ Y+
Sbjct: 633 QTKNIDAKLDKMTQDLKLAGYS 654
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 215/441 (48%), Gaps = 50/441 (11%)
Query: 15 TNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIES 74
T +A S + + +H + LL+ C + Q +QVH Q IK + + ++ +
Sbjct: 24 TIAATSSALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCT 83
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
YA +F++I P+ F +NT+IRGY+ G+ LY +M+ G+ PD +T+
Sbjct: 84 H-EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTF 142
Query: 135 PILLKACGDLRQV-----KGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
P L K G R + + +H V+K +N +H T L+ Y G + +A+ +FD
Sbjct: 143 PFLFK--GFTRDIALEYGRQLHGHVLKHGLQYNVFVH--TALVQMYLLCGQLDTARGVFD 198
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
+ +V+TW +I+ + K + E LF M D V +TLV VLSAC+ L
Sbjct: 199 VCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRT 258
Query: 249 GKWVHEFVNKNCII-LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
GK VH +V KNC + N L A+ DMYA CG ++ AL +F+ + +++ +W +I+ G
Sbjct: 259 GKKVHSYV-KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT 317
Query: 308 IHGCGE---------------------------------EAVKMFWQMQMSGIKPDDVTL 334
GE EA+++F MQ + +KPD+ T+
Sbjct: 318 --NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTM 375
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
++VLTAC+H G +E G+ I + R+ K++ ++ L+D+ + +D+A + R M
Sbjct: 376 VSVLTACAHLGALELGEWIRTYIDRN-KIKNDLFVRNALIDMYFKCGDVDKAESIFREMS 434
Query: 395 MEPNAVLWGSLLTACASADDG 415
+ + W +++ A G
Sbjct: 435 -QRDKFTWTAMIVGLAVNGHG 454
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 167/339 (49%), Gaps = 13/339 (3%)
Query: 133 TYPI--LLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN--FGDVKSAQLLFD 188
T+P+ LL+ C + Q++ VH +K K N+ R++TF C +GD + A+ LFD
Sbjct: 39 THPLISLLETCESMDQLQQVHCQAIK-KGLNANPVLQNRVMTFCCTHEYGDFQYARRLFD 97
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
++ E N+ W MI G+ + + G+ L+ +M GV+ + T + A E
Sbjct: 98 EIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEY 157
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G+ +H V K+ + N + AL MY CG ++ A VF + + +V TWN II
Sbjct: 158 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 217
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
G EE+ ++F M+ + P VTL+ VL+ACS + GK++ ++ ++ KVE N+
Sbjct: 218 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKV-HSYVKNCKVESNLV 276
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
++D+ +D A + R+M + + W ++++ N+ ++A
Sbjct: 277 LENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGF------TNLGEIDVARNYF 329
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
K+ + ++ M + Y ++ +A ++ R M+ N+
Sbjct: 330 DKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNV 368
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 77/197 (39%), Gaps = 11/197 (5%)
Query: 24 SNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK--LIESLVNSSQI 81
+N + +L C HL + + I+ D I + + LI+ +
Sbjct: 366 TNVKPDEFTMVSVLTACAHLGALEL--GEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDV 423
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
A +F ++ F + +I G A G G + + +++ M+ + PD TY +L AC
Sbjct: 424 DKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSAC 483
Query: 142 GDLRQVKGVHSLVVKSKDFNSVIHSLTR---LITFYCNFGDVKSAQLLFDQMTEK-NVVT 197
V ++ + + ++ L+ G +K A + + M K N +
Sbjct: 484 THTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIV 543
Query: 198 WTAMINGHVKQKNYREG 214
W A++ G + YRE
Sbjct: 544 WGALLAG---CRVYRES 557
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 209/567 (36%), Positives = 304/567 (53%), Gaps = 88/567 (15%)
Query: 30 SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLV 87
SH L +KC+ + K +HAQII N T++ L KLI ++ ++ + YA +
Sbjct: 114 SHCPARLCEKCSSMRGLKLLHAQIILHGLTNETLT---LGKLISFCAVDDAGDLQYAQRM 170
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG----- 142
F+QI P+ F +N++IRGY+ + + L+ +MI +GL P+ FT P +LKACG
Sbjct: 171 FDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAY 230
Query: 143 -------DLRQVKGVHSLVVKSKDFNSV------IHSLTRLI------------------ 171
L G+ SLV +V IH +L
Sbjct: 231 WEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIEIT 290
Query: 172 -------------TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH------------- 205
Y G++ SAQ +FD+ EKNVV+WT+MI+ +
Sbjct: 291 GVKIDIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIF 350
Query: 206 ------------------VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+++ YRE +DLF KMR+S V +E TLVS+L+AC+ LG
Sbjct: 351 DQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLV 410
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
+GK +H ++ N L +L DMYAKCG + AL +F + KN+ +WN IIG LA
Sbjct: 411 MGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALA 470
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
+HGCG EA+K+F +MQ G PD++TL +L+ACSH+GL++ G F M Y+V +
Sbjct: 471 LHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVXREI 530
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+HY C+VDLL R LL EA E+I MPM+P+ V+WG+LL AC NVE+ + +++
Sbjct: 531 EHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIH---GNVEIGKQILKQ 587
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L++LEP + G YVL+SNIY +W+D K+R+LM +R I K S IEI+ ++EFMV
Sbjct: 588 LLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMV 647
Query: 488 GDGRHPCSEEIYSMLEYVAISLREECY 514
D RH S IY+ML+ + LR Y
Sbjct: 648 DDKRHKISSSIYAMLDQLTDHLRSAGY 674
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/485 (36%), Positives = 293/485 (60%), Gaps = 14/485 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNS---SQIAYAHLVFNQII 92
L+ KC L + Q+ A IK+ ++ + +AKLI S S ++YA +F +
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVSF----VAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKG 149
P FN++ RGY+ L+ +++ +G+ PD++T+P LLKAC L + +
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H L +K + ++ LI Y DV SA+ +FD++ E VV + AMI G+ ++
Sbjct: 151 LHCLSMK-LGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRN 209
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E + LFR+M+ ++ NE+TL+SVLS+CA LG+ +LGKW+H++ K+ K+
Sbjct: 210 RPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNT 269
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DM+AKCG +++A+ +F+ + K+ W+++I A HG E+++ MF +M+ ++P
Sbjct: 270 ALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQP 329
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D++T + +L ACSH G +E+G++ F M + + P++KHYG +VDLL RA L++AYE
Sbjct: 330 DEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEF 389
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I +P+ P +LW LL AC+S + N++LAE ER+ +L+ + G+YV++SN+YA
Sbjct: 390 IDKLPISPTPMLWRILLAACSSHN---NLDLAEKVSERIFELDDSHGGDYVILSNLYARN 446
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+W+ +R++MK+R VK PGCS IE+N+VVHEF GDG + +++ L+ + L
Sbjct: 447 KKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKEL 506
Query: 510 REECY 514
+ Y
Sbjct: 507 KLSGY 511
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 310/572 (54%), Gaps = 72/572 (12%)
Query: 15 TNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIES 74
T + NS + + K H + LLQ C + Q+H +IK S + +L S
Sbjct: 17 TTALNSQQKQHL-RKPDHAISLLQNCKNPKDLIQLHTLLIKTSLIKEKYAFGRLLLSFAS 75
Query: 75 LVNSSQIAYAHLVFNQIINP-STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG--LDPDS 131
N + YA +F+ + P ++F + T+I+ YA G Y++M+ + + P+
Sbjct: 76 FDNLGSLNYAQKLFDTVDIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPND 135
Query: 132 FTYPILLKACGDLRQVK----------------GVHSL---------------------- 153
FT+ + AC V GVHS
Sbjct: 136 FTFTYVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFD 195
Query: 154 ----------------VVKSKDFNSV-----------IHSLTRLITFYCNFGDVKSAQLL 186
VKS D + + S T ++ Y + G + A L
Sbjct: 196 KIEGPDVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCL 255
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD+M ++N+V+W+A+I G+++ Y + ++LF++M+ + V+++E+ + ++LSACA LGA
Sbjct: 256 FDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGAL 315
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
+ G+W+H +++K+ I ++ L AL DMY+KCG I+ A +VF+ +K V W+S+IGGL
Sbjct: 316 DQGRWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGL 375
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
A+H GE+A+++F +M GI+P ++T I +L AC+H+GL++ G +IF M + K +P
Sbjct: 376 AMHSFGEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPR 435
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
++HYGC+VDLL RA LL +A+ V+ MP++ + +W +LL+AC NVEL E
Sbjct: 436 MQHYGCIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALLSACKLH---RNVELGEQVGR 492
Query: 427 RLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFM 486
LIK+EP ND NYVL SN+YAA +WD +GK+RR MK R + KNPGCS IE+N VHEF+
Sbjct: 493 ILIKMEPQNDMNYVLFSNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSIELNGAVHEFV 552
Query: 487 VGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
D HP S+ IY +L + + +E + M
Sbjct: 553 SRDHSHPQSQVIYELLHILTNHMVQEDHEPMM 584
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 300/555 (54%), Gaps = 55/555 (9%)
Query: 8 NSQLTHFTNSANSHKNSNTATKSHHHLP----------LLQKCTHLVQF---KQVHAQII 54
N+ + + +S+N H++ + H P L++ + L + K H +I
Sbjct: 104 NTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVI 163
Query: 55 KASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHR 114
K + L LI ++ + VF I ++N++I + + G
Sbjct: 164 KVLLGSDVFI---LNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEE 220
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLI 171
++L+ +M + P+ T +L AC D + VHS + +++ S+ S ++
Sbjct: 221 ALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLS-NAML 279
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY-------------------- 211
Y G V+ A+ LFD+M EK++V+WT M+ G+ K Y
Sbjct: 280 DMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNA 339
Query: 212 -----------REGIDLFRKMRDSGV-EVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
+E ++LF +++ S + +E+TLVS LSACA LGA +LG W+H ++ K
Sbjct: 340 LISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQ 399
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ LN L +L DMY KCG +++AL VF V K+V W+++I GLA+HG G++A+ +F
Sbjct: 400 GMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALF 459
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
+MQ +KP+ VT +L ACSH GL+E+G+ F M Y V P VKHY C+VD+L R
Sbjct: 460 SKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGR 519
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
A LL+EA E+I MPM P A +WG+LL AC + NV LAE A +LI+LEP N G Y
Sbjct: 520 AGLLEEAVELIEKMPMAPAASVWGALLGACTIHE---NVVLAEQACSQLIELEPGNHGAY 576
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
VL+SNIYA +WD +R+LM++ + K PGCS IE++ +VHEF+VGD HP +++IY
Sbjct: 577 VLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIY 636
Query: 500 SMLEYVAISLREECY 514
+ L+ + L Y
Sbjct: 637 AKLDEIVARLETIGY 651
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 243/479 (50%), Gaps = 45/479 (9%)
Query: 6 VPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISD 65
+P S N + N++ +H L L+ +C+ Q KQ+HAQ+++ S
Sbjct: 11 LPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSA 70
Query: 66 TQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN 125
++L +L + YA VF+QI +P+ + +NT+IR YA + H+ + ++ +M+
Sbjct: 71 SRLIT-AAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQ 129
Query: 126 GLD-PDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
D PD FT+P L+KA +L ++ K H +V+K S + L LI FY G++
Sbjct: 130 SPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVL-LGSDVFILNSLIHFYAKCGELG 188
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
+F + ++VV+W +MI V+ E ++LF++M V+ N +T+V VLSACA
Sbjct: 189 LGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACA 248
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
E G+WVH ++ +N I + L A+ DMY KCG +E+A R+F + EK++ +W +
Sbjct: 249 KKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTT 308
Query: 302 IIGGLAIHG-----------------------------CG--EEAVKMFWQMQMSGI-KP 329
++ G A G CG +EA+++F ++Q+S KP
Sbjct: 309 MLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKP 368
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D+VTL++ L+AC+ G ++ G I +++ ++ N L+D+ C+ L +A V
Sbjct: 369 DEVTLVSTLSACAQLGAMDLGGWIHVYIKKQ-GMKLNCHLTTSLIDMYCKCGDLQKALMV 427
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
++ + + +W +++ A G + +A + + K++P N V +NI A
Sbjct: 428 FHSVERK-DVFVWSAMIAGLAMHGHGKDA-IALFSKMQEDKVKP----NAVTFTNILCA 480
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 188/498 (37%), Positives = 294/498 (59%), Gaps = 11/498 (2%)
Query: 24 SNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQ--LAKLIESLVNSSQI 81
+N K L LL++C ++ +FKQVHA+ IK S + LAK S +S +
Sbjct: 25 NNCGGKEQECLYLLKRCNNIDEFKQVHARFIKLSLFCSSSFSASSVLAKCAHSGWENS-M 83
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
YA +F I +P TF F T+IRGY + Y +M+ G++PD+FTYP LLKAC
Sbjct: 84 NYAASIFRGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKAC 143
Query: 142 GDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
L R+ K +H V K + + LI Y G+++ + +F+++ K+ +W
Sbjct: 144 TRLKAIREGKQIHGHVFKL-GLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASW 202
Query: 199 TAMINGHVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
++M + V + E + LFR+M R++ ++ E +VS LSACAN GA LG +H F+
Sbjct: 203 SSMFSACVGMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLL 262
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
+N LN + +L DMY KCG I+ AL +F+ + ++N T++++I G A+HG GE A++
Sbjct: 263 RNISELNIIVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALR 322
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL 377
MF +M G++PD V +++L ACSH+GL+++G+ +F M ++ KVEP +HYGCLVDLL
Sbjct: 323 MFSEMIKEGLEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVDLL 382
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDG 437
RA LL+EA E I+++P+E N V+W S L+ C N+EL +IA + L+KL N G
Sbjct: 383 GRAGLLEEALETIQSIPIEQNDVVWRSFLSQCRVHQ---NIELGQIAAQELLKLCSHNPG 439
Query: 438 NYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEE 497
+Y+L+SN+Y+ WDD + R + + + + PG S +++ H F+ D HP +E
Sbjct: 440 DYLLISNMYSQAHMWDDVARSRTEIAIKGLKQTPGFSTVKVKGKTHRFVSQDRSHPQCKE 499
Query: 498 IYSMLEYVAISLREECYA 515
IY ML + L+ E Y+
Sbjct: 500 IYKMLHQMEWQLKFEGYS 517
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 183/507 (36%), Positives = 301/507 (59%), Gaps = 38/507 (7%)
Query: 35 PLLQKCTHLVQF---KQVHAQIIKASFDNRT---------------------ISDTQLAK 70
P+ + C L+ KQVH+ +I+ F + I D L K
Sbjct: 101 PIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVK 160
Query: 71 -------LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI 123
LI + S ++ A +F+++ + S ++N +I YA+ G H+G ++ +M
Sbjct: 161 DTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQ 220
Query: 124 GNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
+P+ T +L C GDL + L +K+ S + T ++ Y G V
Sbjct: 221 DEMCEPNEITLATVLSICAKLGDLEMGLRIKKLN-DNKNLGSNMIVSTAMLEMYVKCGAV 279
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
+L+FD M ++VVTW+AMI G+ + E ++LF M+ + ++ N++TLVSVLSAC
Sbjct: 280 DDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSAC 339
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A LG+ E G+ + +V +I N + +AL MY+KCG I +A ++F + +++ TWN
Sbjct: 340 AQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWN 399
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
S+I GLAI+G E+A+ ++ +M+ +KP+++T + ++TAC+HAG +E G E F +MR D
Sbjct: 400 SMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSD 459
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
+ + PN++H+ C+VDL CR+ L +AYE I M +EPN V+WG+LL+A + NVEL
Sbjct: 460 HNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSA---SRIHLNVEL 516
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
AE+A ++L++LEP N GNYV++SNIYA+ +W +A K+R+LMK++ + K S +E+ D
Sbjct: 517 AELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVED 576
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVAI 507
VH+F+VGD HP S+E+YS ++ +A+
Sbjct: 577 RVHKFLVGDTSHPRSDEVYSTIDGLAL 603
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 203/400 (50%), Gaps = 44/400 (11%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q KQ+ A II + +S T L I L+N+S I YA VF+QI +P + I
Sbjct: 17 QLKQIQALIII-----KYLSLTPL--FIRRLLNASFIQYARQVFDQIPHPDQGVHCSFIT 69
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFN 161
Y+ L + ++ + M N + FT P + K+C L + K VHSLV++ F+
Sbjct: 70 AYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIR-YGFH 128
Query: 162 SVIHSLTRLITFYCNFGDVKSAQL-------------------------------LFDQM 190
S + LI FY D+ SA+L LFD+M
Sbjct: 129 SSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKM 188
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
++++V+W AMI+ + + +Y +G +F++M+D E NE+TL +VLS CA LG E+G
Sbjct: 189 RDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGL 248
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
+ + + + N + A+ +MY KCG +++ VF + ++V TW+++I G A +G
Sbjct: 249 RIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNG 308
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
EA+++F M+ + IKP+DVTL++VL+AC+ G +E G+ I + + NV
Sbjct: 309 RSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLIS-NVYVA 367
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
L+ + + + +A ++ +P N V W S++ A
Sbjct: 368 SALLGMYSKCGNIIKARQIFDKLPQRDN-VTWNSMIMGLA 406
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 185/504 (36%), Positives = 297/504 (58%), Gaps = 44/504 (8%)
Query: 38 QKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTF 97
+KC H+ Q K+ HAQ++ + + ++L ++ S + +A +F QI +P+
Sbjct: 13 EKCRHMKQLKEAHAQVLTCGLGTDSFALSRLLAFCSHPLHGS-LPHAWKLFQQIQHPTIC 71
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLV 154
NT+I+ + G IQ+Y+QM+ NGL PD++T P +LKAC L+ + H
Sbjct: 72 ICNTMIKAFVLKGKLINTIQIYSQMLENGLYPDNYTLPYVLKACAGLQSCHLGESAHGQS 131
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK------- 207
VK + + T LI Y +FG+V++A+ +FD+M V+WT MI+G+ K
Sbjct: 132 VKLGFWFDIFVGNT-LIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGYAKVGDVETA 190
Query: 208 -----------------------QKN-YREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
Q N ++EG+ +FR M+ +G+E +E LVS+L ACA+L
Sbjct: 191 RMLFDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHL 250
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
GA E+G WVH ++++ L+ +L L DMYAKCG ++ A ++F + +++ WN++I
Sbjct: 251 GAMEIGVWVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWNAMI 310
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
G+A++G G+ A+++F +M+ +G+KPDD+T IA+ TACS++G+ + + +M Y +
Sbjct: 311 SGMAMNGDGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNM 370
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN----AVLWGSLLTACASADDGANVE 419
EP +HYGC+VDLL RA LL EA E+I MP + A+ W +LL+AC S E
Sbjct: 371 EPKSEHYGCIVDLLGRAGLLKEAKELILKMPNSSSPTEQAIAWRALLSACCSH---GQTE 427
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
+AE A +RL LE + G YVL+SN+YAA + D ++R++M+ R + K PGCS ++IN
Sbjct: 428 VAEDAAQRLFHLE-HHSGAYVLLSNLYAAAGKQDHVRRIRKMMENRGVDKAPGCSSVKIN 486
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLE 503
VVHEF+ G+ H EE++ +LE
Sbjct: 487 GVVHEFIAGEETHLQMEEVHRVLE 510
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/477 (36%), Positives = 293/477 (61%), Gaps = 19/477 (3%)
Query: 36 LLQKCTHLV---QFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQI 91
LL+ C++ + +QVH ++K ++D + LI + A VF+++
Sbjct: 111 LLKACSNFSGSREGRQVHGVVVKLGL----LADHYVQNSLIRCYGACGDFSCAGKVFDEM 166
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVK 148
+ ++N++I G+ +AG I ++ +M ++P T +L AC GDL K
Sbjct: 167 LVRDVVSWNSLISGFMKAGHFDEAISVFFRM---DVEPSMTTLVSVLAACARNGDLCTGK 223
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
G+H ++ + N V+ + ++ Y G A+ +FD++ +++V+WT MI G V+
Sbjct: 224 GIHGVIERRFKVNLVLGN--AMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQS 281
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ ++ ++LF MR G+ + + L SVLSACA+LG + G WVHE++N+ I + +G
Sbjct: 282 DHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIG 341
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
A+ DMYAKCG IE AL++F + ++N TWN+++ GLA+HG EA+ +F M +SG+K
Sbjct: 342 TAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVK 401
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
P+++T +A+LTAC H GL+++G++ F NM + Y + P ++HYGC++DL CRA LL+EA E
Sbjct: 402 PNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVE 461
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
+ R MPM+P+ ++WG LL AC + N+EL+ + +++L+ + G +VL+SNI A
Sbjct: 462 LARTMPMKPDVLIWGLLLNACTTV---GNIELSHRIQDYILELDHDDSGVFVLLSNISAI 518
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
+W + ++RRLMK+R + K PG SVIE++ HEF+VGD H +EEIY +L +
Sbjct: 519 NQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLI 575
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 198/383 (51%), Gaps = 17/383 (4%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L ++ C +L F+Q+HAQ++ + +++ + + V A +L
Sbjct: 9 LDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQGNT-R 67
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGV 150
+F FN++I GY + +Y +M+ +G PD FT+P+LLKAC + R+ + V
Sbjct: 68 LGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQV 127
Query: 151 HSLVVKSKDF--NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
H +VVK + V +SL R Y GD A +FD+M ++VV+W ++I+G +K
Sbjct: 128 HGVVVKLGLLADHYVQNSLIRC---YGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKA 184
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
++ E I +F +M VE + TLVSVL+ACA G GK +H + + +N LG
Sbjct: 185 GHFDEAISVFFRM---DVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERR-FKVNLVLG 240
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
A+ DMY K G EA +F + +++ +W +I GL ++++++F M+ GI
Sbjct: 241 NAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGIS 300
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
PD + L +VL+AC+ G ++ G + Y +R K + ++ +VD+ + ++ A
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIG--TAIVDMYAKCGCIEMAL 358
Query: 388 EVIRNMPMEPNAVLWGSLLTACA 410
++ +M + N W +LL A
Sbjct: 359 KIFYSMS-QRNTFTWNALLCGLA 380
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 156/322 (48%), Gaps = 26/322 (8%)
Query: 138 LKACGDLRQVKGVHSLVVKS----KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
+K C +LR + +H+ +V S DF + ++++ F+ NF V+ D + +
Sbjct: 12 IKDCKNLRIFRQIHAQLVTSGLVYDDFVT-----SKVMEFFANF--VEYGDYACDYLEQG 64
Query: 194 NV----VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
N + ++ING+V + + + ++R+M G + T +L AC+N S G
Sbjct: 65 NTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREG 124
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
+ VH V K ++ + + +L Y CG A +VF +L ++V +WNS+I G
Sbjct: 125 RQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKA 184
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
G +EA+ +F++M ++P TL++VL AC+ G + GK I + R +KV N+
Sbjct: 185 GHFDEAISVFFRMD---VEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKV--NLVL 239
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
++D+ + EA + +P + V W ++T +D L +M R +
Sbjct: 240 GNAMLDMYVKNGCFYEAKNIFDELPTR-DIVSWTIMITGLVQSDHPKQ-SLELFSMMRTL 297
Query: 430 KLEPFNDGNYVLMSNIYAAKAQ 451
+ P + ++++++ +A A
Sbjct: 298 GISP----DAIILTSVLSACAS 315
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 204/538 (37%), Positives = 299/538 (55%), Gaps = 75/538 (13%)
Query: 46 FKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
K +HAQII N T++ L KLI ++ ++ + YA +F+QI P+ F +N++I
Sbjct: 4 LKLLHAQIILHGLTNETLT---LGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLI 60
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVK---- 156
RGY+ + + L+ +MI +GL P+ FT P +LKACG + VH L +K
Sbjct: 61 RGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIG 120
Query: 157 ----------------------SKDFNSV-----IHSLTR--LITFYCNFGDVKSAQLLF 187
K F+ + I + R L+ Y G++ SAQ +F
Sbjct: 121 SLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLIDIIVRNALVDMYAKCGNLHSAQAIF 180
Query: 188 DQMTEKNVVTWTAMING-------------------------------HVKQKNYREGID 216
D+ EKNVV+WT+MI+ ++++ YRE +D
Sbjct: 181 DRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALD 240
Query: 217 LFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYA 276
LF KMR+S V +E TLVS+L+AC+ LG +GK +H ++ N L +L DMYA
Sbjct: 241 LFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYA 300
Query: 277 KCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIA 336
KCG + AL +F + KN+ +WN IIG LA+HGCG EA+K+F +MQ G PD++TL
Sbjct: 301 KCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTG 360
Query: 337 VLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPME 396
+L+ACSH+GL++ G F M Y+V ++HY C+VDLL R LL EA E+I MPM+
Sbjct: 361 LLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMK 420
Query: 397 PNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAG 456
P+ V+WG+LL AC NVE+ + +++L++LEP + G YVL+SNIY +W+D
Sbjct: 421 PDVVVWGALLGACRIH---GNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVK 477
Query: 457 KMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
K+R+LM +R I K S IEI+ ++EFMV D RH S IY+ML+ + LR Y
Sbjct: 478 KIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAGY 535
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/512 (36%), Positives = 298/512 (58%), Gaps = 24/512 (4%)
Query: 23 NSNTATKSHHH---LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSS 79
+ + +T +HH L + C+ + Q KQ+HA ++ ++ + K+++ + S
Sbjct: 29 SPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFS 88
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYA-EAGLGHRGIQLYTQMIGNG-LDPDSFTYPIL 137
+ YA VF+ I N S+F +NT+IR A + LY +M+ G PD T+P +
Sbjct: 89 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 148
Query: 138 LKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
LKAC + K VH +VK F ++ LI Y + G + A+ +FD+M E++
Sbjct: 149 LKACAYIFGFSEGKQVHCQIVK-HGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERS 207
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
+V+W +MI+ V+ Y + LFR+M+ S E + T+ SVLSACA LG+ LG W H
Sbjct: 208 LVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHA 266
Query: 255 FVNKNC---IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
F+ + C + ++ + +L +MY KCG + A +VF+ + ++++ +WN++I G A HG
Sbjct: 267 FLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGR 326
Query: 312 GEEAVKMFWQM--QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
EEA+ F +M + ++P+ VT + +L AC+H G + KG++ F M RDY +EP ++H
Sbjct: 327 AEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEH 386
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
YGC+VDL+ RA + EA +++ +MPM+P+AV+W SLL AC GA+VEL+E +I
Sbjct: 387 YGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKK--GASVELSEEIARNII 444
Query: 430 KLEPFND-------GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
+ N+ G YVL+S +YA+ ++W+D G +R+LM E I K PGCS IEIN +
Sbjct: 445 GTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGIS 504
Query: 483 HEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
HEF GD HP +++IY L+ + LR Y
Sbjct: 505 HEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGY 536
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 185/485 (38%), Positives = 276/485 (56%), Gaps = 12/485 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP + + L + +K F + T LA L +I A L+F QI
Sbjct: 214 LPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYS---KCGEIETARLLFGQIGQ 270
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY----PILLKACGDLRQVKG 149
P ++N +I GY ++L+ +++ +G +S + P+ G L +
Sbjct: 271 PDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPF-GHLHLTRC 329
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H KS S T L T Y +++SA+LLFD+ +EK++ +W AMI+G+ +
Sbjct: 330 IHGFCTKSGV-VSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNG 388
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ I LF++M+ V N +T+ S+LSACA LGA LGKWVH+ +N+ N +
Sbjct: 389 LTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVST 448
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG I EA R+F ++ EKN TWN++I G +HG G EA+ +F +M S + P
Sbjct: 449 ALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSP 508
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
VT ++VL ACSHAGL+ +G EIF +M D+ EP +HY C+VDLL RA LD+A +
Sbjct: 509 TGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDF 568
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
IR MP+EP +WG+LL AC D LA +A ++L +L+P N G YVL+SNIY+A
Sbjct: 569 IRKMPVEPGPPVWGALLGACMIHKDA---NLARLASDKLFELDPQNVGYYVLLSNIYSAG 625
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+ +A +R ++K R + K PGC++IE+ + +H F GD HP + IY+MLE + +
Sbjct: 626 QNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKM 685
Query: 510 REECY 514
RE +
Sbjct: 686 REAGF 690
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 211/480 (43%), Gaps = 62/480 (12%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L L+ + + L Q Q HAQII N ++ T KL L + I A L+F+ I N
Sbjct: 14 LTLINRVSTLHQLNQTHAQIILNGLHNDLVTVT---KLTHKLSHLKAIDQASLLFSTIPN 70
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDPDSFTYPILLKACGDLRQVKGVHS 152
P F +N +IR ++ + LYT + L+PD+FTY ++ L +H+
Sbjct: 71 PDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHA 130
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
+ + F S + + ++ Y F V +A+ +FD M E++ V W M++G VK +
Sbjct: 131 HSIVA-GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFD 189
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E I +F M G+ + T+ +VL A L LG + K + + L
Sbjct: 190 EAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLA 249
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
+Y+KCG IE A +F + + ++ ++N++I G + E +V++F ++ +SG K +
Sbjct: 250 CLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSS 309
Query: 333 TLIAV-----------LTACSHA------------------------GLIEKGKEIFYNM 357
+++ + LT C H IE + +F
Sbjct: 310 SIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLF--- 366
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM---PMEPNAVLWGSLLTACASADD 414
D E ++ + ++ + L ++A + + M + PN V S+L+ACA
Sbjct: 367 --DESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACA---- 420
Query: 415 GANVELAEIAMER----LIKLEPFNDGNYV--LMSNIYAAKAQWDDAGKMRRLMKERNIV 468
+L +++ + LI E F +V + ++YA +A ++ +M E+N V
Sbjct: 421 ----QLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAV 476
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 5/218 (2%)
Query: 122 MIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
M+ G+ + L+ L Q+ H+ ++ + N ++ ++T+L + +
Sbjct: 1 MLYRGIASTRNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLV-TVTKLTHKLSHLKAID 59
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG-VEVNELTLVSVLSAC 240
A LLF + ++ + +I + + L+ +R S +E + T V+S
Sbjct: 60 QASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGA 119
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
++LG L + +G+A+ Y K + A +VF +LE++ WN
Sbjct: 120 SSLGLGLLLHAHSIVAGFGSDLF---VGSAIVACYFKFSRVAAARKVFDGMLERDTVLWN 176
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
+++ GL + C +EA+ +F M GI D T+ AVL
Sbjct: 177 TMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVL 214
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 302/527 (57%), Gaps = 27/527 (5%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDN 60
+L L P+ Q ANS S L L + C+ + Q KQ+HA ++ ++ +
Sbjct: 6 LLHPLSPHIQ------PANSPSASTAGNHHRRILSLAETCSDMSQLKQLHAFTLRTTYPD 59
Query: 61 RTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA-EAGLGHRGIQLY 119
+ K+++ + S + YA VF+ I N S+F +NT+IR A + LY
Sbjct: 60 EPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLY 119
Query: 120 TQMIGNGLD-PDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYC 175
+M+ G PD T+P +LKAC L + K VH +VK F+ ++ LI FY
Sbjct: 120 RKMLERGESAPDKHTFPFVLKACAYIFGLSEGKQVHCQIVK-HGFSGDVYVNNGLIHFYG 178
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
+ G + A+ +FD+M E+++V+W +MI+ V+ Y + LFR M+ S E + T+ S
Sbjct: 179 SCGCLDLARKVFDEMPERSLVSWNSMIDALVRVGEYDSALQLFRDMQKS-FEPDGYTMQS 237
Query: 236 VLSACANLGASELGKWVHEFVNKNC---IILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
VLSACA LG+ LG W H F+ +NC + ++ + +L +MY KCG + A +VF+ +
Sbjct: 238 VLSACAGLGSLSLGTWSHVFLLRNCDVDVAMDVLIKNSLIEMYCKCGSLRMAEQVFQGMR 297
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG--IKPDDVTLIAVLTACSHAGLIEKG 350
+ ++ +WN++I G A HG EEA+ F M G +KP+ VT +A+L AC+H G++ KG
Sbjct: 298 KHDLASWNAMILGFATHGKAEEAMNCFDCMVKEGKNVKPNSVTFVALLIACNHRGMVNKG 357
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
++ F M R+Y +EP ++HYGC++DLL RA + EA +++ +MPM+P+AV+W SLL AC
Sbjct: 358 RQYFDMMVREYGIEPALEHYGCIIDLLARAGYITEAIDMVMSMPMKPDAVIWRSLLDACC 417
Query: 411 SADDGANVELAEIAMERLIKLEPFN-------DGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
GA+VEL+E +I N G YVL+S +YA+ +W+D G +R+LM
Sbjct: 418 KK--GASVELSEEIARNIIGTMEDNQSSNSNCSGAYVLLSRVYASANRWNDVGIVRKLMS 475
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+ I K PGCS IEIN + +EF GD HP +++IY L+ + LR
Sbjct: 476 DHGIRKEPGCSSIEINGISNEFFAGDTSHPQTKQIYQQLKVIDDRLR 522
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/468 (37%), Positives = 277/468 (59%), Gaps = 42/468 (8%)
Query: 44 VQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
Q Q+HA I++ S+ L+ I ++ YA+LVF+Q NP+ FN++I
Sbjct: 23 TQLPQIHAHILRHHLHQ---SNQILSHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMI 79
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK--------------- 148
+GY+ G + L++QM G+ PD FT+ LLK+C + +
Sbjct: 80 KGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGVHGVVIVVGFE 139
Query: 149 -------GVHSLVV---KSKDFNSVIHSL--------TRLITFYCNFGDVKSAQLLFDQM 190
G+ L + +D V + +I +C GD++ LF QM
Sbjct: 140 RFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDVIVWNMMIRGFCKVGDIEMGFRLFRQM 199
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
+++VV+W +MI G + E ++LFR+M D G E ++ T+V++L CA LGA ++G+
Sbjct: 200 RDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVGE 259
Query: 251 WVHEFVNKNCIILND--KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
W+H + ++ +L D +G +L D Y KCG +E A RVF + +KNV +WN++I GL
Sbjct: 260 WIHSYA-ESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTF 318
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
+G GE +F +M G++P+D T + VL+ C+HAGL+E+G+ +F +M D+K+EP ++
Sbjct: 319 NGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMTVDHKMEPKLE 378
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
H+GC+VDLL R ++EA +++R MPM PNAVLWGSLL+A + D V+ AE A++ L
Sbjct: 379 HFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGD---VKHAECAVKEL 435
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
I+LEP+N GNYVL+SN+YA +WD+ K+R LMKE+NI KNPG S++
Sbjct: 436 IELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSMV 483
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/511 (36%), Positives = 306/511 (59%), Gaps = 40/511 (7%)
Query: 33 HLPLLQK-CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
+L +L K CT + K++H+Q+IK T + +++ S + I YA+LVF QI
Sbjct: 24 YLSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCAS--PAGDINYAYLVFVQI 81
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDPDSFTYPILLKACGDL---RQV 147
NP+ FA+NT+IRG++ + + I LY M+ + + P TYP + KA L +
Sbjct: 82 QNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLASEG 141
Query: 148 KGVHSLVVK-SKDFNSVIHSLTRLITFYCNF----------------------------- 177
+H ++K + +S I + + C F
Sbjct: 142 AQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVAKC 201
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
G V ++ LFD+M+ +N V+W +MI+G+V+ + + ++LF+KM+ +E +E T+VS+L
Sbjct: 202 GLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLL 261
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
+ACA LGA G+W+H+++ K LN + A+ DMY+KCG I++A++VF+ + +
Sbjct: 262 NACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRRGLS 321
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
WNS+I GLA++G EA+++F +Q S ++PDDV+ IAVLTAC H G+++K K+ F M
Sbjct: 322 CWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLM 381
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
R YK++P +KH+ C+VD+L RA LL+EA E+IR+M ++P+A++WGSLL +C N
Sbjct: 382 RDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSCCKY---GN 438
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
+++A+ A LI+L P ++VL++N YAA +++A K R +KE +I K PGCS IE
Sbjct: 439 IKMAKRAANHLIELNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPGCSCIE 498
Query: 478 INDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
+ VHEF+ G HP +EIY +L+ + ++
Sbjct: 499 VGGEVHEFVAGGRAHPEIKEIYRVLDVLTLT 529
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/512 (36%), Positives = 301/512 (58%), Gaps = 42/512 (8%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQ--LAKLIESLVNSSQIAYAHLVFNQIIN 93
LLQKC L + KQ+H + + S Q KL+ + A VFN I N
Sbjct: 9 LLQKCGSLEKLKQIHGKAVTLGL---LCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQN 65
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGV 150
P ++ +I Y + +++ + +GL PDSF + ACG DL + V
Sbjct: 66 PDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIV 125
Query: 151 HSLV--------------------------VKSKDFNSV----IHSLTRLITFYCNFGDV 180
H +V V F ++ + S T L+ + D+
Sbjct: 126 HGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDI 185
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE-VNELTLVSVLSA 239
++A+ +FD+M +N V+WTAMI G+V+ + G++LF++MR G + +T+V+VLS
Sbjct: 186 EAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSG 245
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
CA++GA +LG VH +VNK + L+ + AL DMYAK G + AL++F+ + +++V +W
Sbjct: 246 CADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSW 305
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
++I GLA+HG G A++ F M SG+ P++VTL++VL+ACSHAGL+ +G+ +F M +
Sbjct: 306 TTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQ 365
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
+ ++P ++HYGC+VDLL RA LL EA E+I +MP++P++V+W SLL+AC N+
Sbjct: 366 CHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVH---GNLA 422
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
LAE+A + +I+LEP +DG Y+L+ NIY + ++W+DA K R+ M++R + K PGCS +E+N
Sbjct: 423 LAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSWVEVN 482
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
VVHEF+ D H ++Y++LE + +++
Sbjct: 483 GVVHEFLAEDAVHCIRADVYTVLEAITEQMKD 514
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 5/236 (2%)
Query: 133 TYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLT-RLITFYCNFGDVKSAQLLFDQMT 191
T+ LL+ CG L ++K +H V S L +L+ Y G AQ +F+ +
Sbjct: 5 TFYFLLQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQ 64
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
++V+WT +I+ ++ + +F + SG+ + +V +SAC + G+
Sbjct: 65 NPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRI 124
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
VH V + + + +G AL DMY++ G IE A VFK + K+V +W S++ G
Sbjct: 125 VHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCND 184
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
E A ++F +M M + V+ A++T + G E+F MR + K P V
Sbjct: 185 IEAARRIFDEMPMR----NSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTV 236
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/472 (38%), Positives = 283/472 (59%), Gaps = 11/472 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K+VH I++ ++ + + L+ + +I A VF++ +N +I GY
Sbjct: 125 KEVHGVIVRIGYE---LDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGY 181
Query: 107 AEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNS 162
A G+ ++ +M+ + P+ T L+ AC +L+ + +H ++K
Sbjct: 182 ARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLRE 241
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ LI Y G + A+ LFD++ EKN V W ++I G+ + + E I+L R+M
Sbjct: 242 GVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMH 301
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
S ++ + T+ VLSACA +GA LG WVH F K I + +G AL DMYAKCG+I
Sbjct: 302 LSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGI-WDVFIGTALIDMYAKCGFIG 360
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A +VF + E+NV TWN+I+ G A HG E A+++F +M+ SG +PD +T +AVL AC+
Sbjct: 361 AARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACA 420
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
H+GL+E GK+ F M + YK+ P V+HYGC+VDLL RA LL EA E+I+ M +EPN V+W
Sbjct: 421 HSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVW 480
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL+AC+ N+E+ E A +IKL + G+YV+++N+YA+ +++ +R +M
Sbjct: 481 GALLSACSIH---GNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMM 537
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
E+ I K+ GCS+IEI DVVHEF+V D HP SEEIYS+L+ ++ L+ Y
Sbjct: 538 VEKGICKSHGCSMIEIGDVVHEFVVADKMHPRSEEIYSVLDELSKKLKMAGY 589
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 205/389 (52%), Gaps = 23/389 (5%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQ--LAKLIESLVNSSQIAYAHLVFNQI 91
L L++ CT++ Q KQ+HA+ I +S +S TQ + K+I S ++ + + YA VFNQ
Sbjct: 10 LALIETCTNIQQLKQIHAKSIISS-----LSYTQFIITKIINSFLSHACLDYATQVFNQT 64
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKACGD---LRQV 147
P F +N +IR Y+ + I +Y +M + D +TYP + KAC + +
Sbjct: 65 QEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKG 124
Query: 148 KGVHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
K VH ++V+ + + + S L+ FY G++ +AQ +FD+ K+VV W A+I G+
Sbjct: 125 KEVHGVIVRIGYELDGFLQS--SLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYA 182
Query: 207 KQKNYREGIDLFRKMRD-SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+Q + +F++M + V NE T++ ++ AC +LG+ +H ++ K+ ++
Sbjct: 183 RQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREG 242
Query: 266 -KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
KL AAL ++Y KCGY++ A ++F + EKN WNS+I G G E +++ +M +
Sbjct: 243 VKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHL 302
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEI--FYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
S +KPD T+ VL+AC+ G G + F + + V L+D+ +
Sbjct: 303 SNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGIWDVFIGT----ALIDMYAKCGF 358
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
+ A +V M E N W ++L+ AS
Sbjct: 359 IGAARKVFDQMN-ERNVATWNAILSGYAS 386
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 161/338 (47%), Gaps = 28/338 (8%)
Query: 137 LLKACGDLRQVKGVHS-LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
L++ C +++Q+K +H+ ++ S + I +T++I + + + A +F+Q E +
Sbjct: 12 LIETCTNIQQLKQIHAKSIISSLSYTQFI--ITKIINSFLSHACLDYATQVFNQTQEPDG 69
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRD-SGVEVNELTLVSVLSACANLGASELGKWVHE 254
+ AMI + + I ++ KMR + ++ T V ACA+ A E GK VH
Sbjct: 70 FIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHG 129
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+ + L+ L ++L + Y CG I A +VF K+V WN++I G A G +
Sbjct: 130 VIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLD 189
Query: 315 AVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
+ +F +M ++ ++P++ T++ ++ AC + ++ G+ I M +D + VK L
Sbjct: 190 SFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAAL 249
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME-RLIKLE 432
++L + LD A ++ +P E N V+W SL+ C G+ E+ E+ E L L+
Sbjct: 250 INLYVKCGYLDGARKLFDEIP-EKNTVVWNSLI--CGYCQIGSLNEVIELLREMHLSNLK 306
Query: 433 P-----------------FNDGNYVLMSNIYAAKAQWD 453
P FN GN+V K WD
Sbjct: 307 PDRFTVSGVLSACAQMGAFNLGNWV--HRFAEKKGIWD 342
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 185/520 (35%), Positives = 291/520 (55%), Gaps = 13/520 (2%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFK---QVHAQIIKAS 57
M++ +V + + + S + S +L+ C L F +H+ + K
Sbjct: 75 MIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTG 134
Query: 58 FDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQ 117
FD T + + A VF+ ++ + ++ +I G E G +
Sbjct: 135 FDCDVFVKTNVVCFYS---KCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191
Query: 118 LYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFY 174
L+ ++ +GL PD F +L+AC GDL + + ++ + + T L+ Y
Sbjct: 192 LFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDR-CMRECGLSRNVFVATSLVDMY 250
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
G ++ A+ +FD M EK++V W+AMI G+ RE I+LF +MR V + +V
Sbjct: 251 TKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMV 310
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
LS+CA+LGA ELG W +N + N LG +L D YAKCG +EEAL V+K++ EK
Sbjct: 311 GALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEK 370
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
+ +N++I GLA++G A +F QM GI P++ T + +L C+HAGL++ G+ F
Sbjct: 371 DRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYF 430
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
+M D+ V P ++HYGC+VDLL RA LDEA+ +I+ MPM+ N ++WGSLL C +
Sbjct: 431 NSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRE 490
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
+LAE +++LI+LEP+N G+YVL+SNIY+A +WD+A K+R + E+ + K PG S
Sbjct: 491 ---TQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYS 547
Query: 475 VIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+E++ VVHEF+VGD HP S++IY LE + L+E Y
Sbjct: 548 WVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGY 587
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 6/288 (2%)
Query: 68 LAKLIESLVNSSQIA-YAHLVFNQI-INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN 125
L+ ++ S +N S A Y LVF++ N +TF +NT+IRG + + LY M
Sbjct: 39 LSIILRSTINFSNNAQYPILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKA 98
Query: 126 GLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
+ PDSFT+ +LKAC L +HSLV K+ F+ + T ++ FY G ++
Sbjct: 99 AIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKT-GFDCDVFVKTNVVCFYSKCGFLRD 157
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A +FD M KNVV+WT MI G ++ +RE +DLFR + +SG+ + +V VL ACA
Sbjct: 158 AWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACAR 217
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
LG E G+W+ + + + N + +L DMY KCG +EEA VF ++EK++ W+++
Sbjct: 218 LGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAM 277
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
I G A +G EA+++F++M+ ++PD ++ L++C+ G +E G
Sbjct: 278 IQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELG 325
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/512 (36%), Positives = 298/512 (58%), Gaps = 24/512 (4%)
Query: 23 NSNTATKSHHH---LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSS 79
+ + +T +HH L + C+ + Q KQ+HA ++ ++ + K+++ + S
Sbjct: 38 SPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFS 97
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYA-EAGLGHRGIQLYTQMIGNG-LDPDSFTYPIL 137
+ YA VF+ I N S+F +NT+IR A + LY +M+ G PD T+P +
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 138 LKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
LKAC + K VH +VK F ++ LI Y + G + A+ +FD+M E++
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVK-HGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERS 216
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
+V+W +MI+ V+ Y + LFR+M+ S E + T+ SVLSACA LG+ LG W H
Sbjct: 217 LVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHA 275
Query: 255 FVNKNC---IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
F+ + C + ++ + +L +MY KCG + A +VF+ + ++++ +WN++I G A HG
Sbjct: 276 FLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGR 335
Query: 312 GEEAVKMFWQM--QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
EEA+ F +M + ++P+ VT + +L AC+H G + KG++ F M RDY +EP ++H
Sbjct: 336 AEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEH 395
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
YGC+VDL+ RA + EA +++ +MPM+P+AV+W SLL AC GA+VEL+E +I
Sbjct: 396 YGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCK--KGASVELSEEIARNII 453
Query: 430 KLEPFND-------GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
+ N+ G YVL+S +YA+ ++W+D G +R+LM E I K PGCS IEIN +
Sbjct: 454 GTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGIS 513
Query: 483 HEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
HEF GD HP +++IY L+ + LR Y
Sbjct: 514 HEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGY 545
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 185/502 (36%), Positives = 302/502 (60%), Gaps = 39/502 (7%)
Query: 37 LQKCTHLVQF--------KQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQ------- 80
L KC +L+QF + +HA I+ +++ + K LI ++V+ S
Sbjct: 18 LTKCIYLLQFCASSKHKLRXIHAFSIRHGV---LLNNPDMGKHLIFTIVSLSAPMSYAYN 74
Query: 81 -----IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYP 135
++YA+ VF I NP+ F +NT+ RGYAE+ ++ Y QMI + ++PD+ TYP
Sbjct: 75 VFTWVLSYAYNVFTMIHNPNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYP 134
Query: 136 ILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
LLKA ++R+ + +HS+ +++ F S++ L+ Y GD +SA +F+ M +
Sbjct: 135 FLLKAISKSLNVREGEAIHSVTIRN-GFESLVFVQNSLLHIYAACGDTESAHNVFELMRD 193
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
+++V ++ING E + LFR+M GVE + T+VS+LSA A LGA ELG+ V
Sbjct: 194 RDLVAXISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRV 253
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG 312
H ++ K + N + +L D+YAKC I E E+N +W S+I GLA++G G
Sbjct: 254 HVYLLKVGLRENSHVTNSLLDLYAKCDAIWEX--------ERNAVSWTSLIVGLAVNGFG 305
Query: 313 EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC 372
EEA+++F +M+ G+ P ++T + VL ACSH G++++G + F M+ ++ + P ++HYGC
Sbjct: 306 EEALELFREMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGC 365
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLE 432
+VDLL RA L+ +AYE I+NMP++PNAV W +LL AC ++ L E A L+KLE
Sbjct: 366 MVDLLSRAGLVKQAYEYIQNMPVQPNAVTWRTLLGACTIH---GHLGLGETARSHLLKLE 422
Query: 433 PFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRH 492
P + G+YVL+SN+Y ++ +W D +RR M + + K G S++E+ + V+EF +G+ H
Sbjct: 423 PKHSGDYVLLSNLYTSECRWADVQLIRRSMLKDGVKKTSGYSLVELGNRVYEFTMGNRSH 482
Query: 493 PCSEEIYSMLEYVAISLREECY 514
P S+++Y++LE + L+ E Y
Sbjct: 483 PQSQDVYALLEKITELLKLEGY 504
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 160/352 (45%), Positives = 234/352 (66%), Gaps = 3/352 (0%)
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
SLT +IT Y +G + A++LFD + E++ + W MI+G+ + EG+ LFR+M ++
Sbjct: 8 SLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAK 67
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
V NE+T+++VLSAC GA E G+WVH ++ N I +N ++G +L DMY+KCG +E+A
Sbjct: 68 VRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDAR 127
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
VF+ + K+V WNS++ G A+HG ++A+++F +M M G +P D+T I VL ACSHAG
Sbjct: 128 LVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAG 187
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
L+ +G + FY+M+ +Y +EP V+HYGC+V+LL RA L+EAYE+++NM ++ + VLWG+L
Sbjct: 188 LVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTL 247
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L AC N+ L E E L+ N G YVL+SNIYAA W+ ++R LMKE
Sbjct: 248 LGACRLH---GNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKES 304
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
K PGCS IE+N+ VHEF+ GD RHP S EIY MLE + L+ Y +
Sbjct: 305 GFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQ 356
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 129/252 (51%), Gaps = 6/252 (2%)
Query: 64 SDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI 123
S L +I I A ++F+ + +N +I GYA+ GL + G+ L+ QM+
Sbjct: 5 SLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQML 64
Query: 124 GNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
+ P+ T +L ACG L + VHS +++ + T LI Y G +
Sbjct: 65 NAKVRPNEVTVLAVLSACGQTGALETGRWVHSY-IENNGIGINVRVGTSLIDMYSKCGSL 123
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
+ A+L+F++++ K+VV W +M+ G+ ++ + LF++M G + ++T + VL+AC
Sbjct: 124 EDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNAC 183
Query: 241 ANLG-ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCT 298
++ G SE K+ + ++ I + + ++ + GY+EEA + K + ++++
Sbjct: 184 SHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVL 243
Query: 299 WNSIIGGLAIHG 310
W +++G +HG
Sbjct: 244 WGTLLGACRLHG 255
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 199/576 (34%), Positives = 315/576 (54%), Gaps = 85/576 (14%)
Query: 13 HFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KL 71
H + +S + S + K+ HL Q T L KQ HA I++ + D+ +A L
Sbjct: 17 HLIPNGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGH----LQDSYIAGSL 72
Query: 72 IESLVNSSQIAYAHL-----VFNQIINPSTFAFN-------------------------- 100
++S N S Y VF+ + P+ F +N
Sbjct: 73 VKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAH 132
Query: 101 ---------TVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSF----------TYPILLKA- 140
V++ ++AG+ G+Q++ ++ +GL D ++ L++A
Sbjct: 133 FRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEAR 192
Query: 141 -------------C------GDLR--QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
C G LR +V+ L D S+I + +I+ + G
Sbjct: 193 RILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPD-RSMISTWNAMISGFSRCGM 251
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
V+ A+ FD+M E++ ++W+AMI+G++++ + E +++F +M+ + + L SVLSA
Sbjct: 252 VEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSA 311
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
CANLGA + G+W+H + +N I L+ LG +L DMYAKCG I+ A VF+ + K V +W
Sbjct: 312 CANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSW 371
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N++IGGLA+HG E+A+ +F +M I P+++T + VL AC+H GL++KG IF +MR+
Sbjct: 372 NAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRK 428
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
+Y VEP ++HYGC+VDLL RA LL EA +V+ ++P EP +WG+LL AC NVE
Sbjct: 429 EYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKH---GNVE 485
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
L E + L++LEP N G Y L+SNIYA +W++ G++R+LMKER I PG S+I++
Sbjct: 486 LGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLG 545
Query: 480 -DVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
VH+F++GDG HP ++IY ML+ V L+ E Y
Sbjct: 546 RGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGY 581
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 289/495 (58%), Gaps = 47/495 (9%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
L+ C +VH +++ + TQ+ L + ++ +A VF Q+ +P+
Sbjct: 21 LRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNA---HRRVTHAARVFAQVRDPNL 77
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP-------DSFTYPILLKACGD---LRQ 146
N +I+ YA+ + +Y +M+ P D FTYP LLKACG L
Sbjct: 78 HLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALEL 137
Query: 147 VKGVHSLVVKSK------DFNSVIHSLTR------------------------LITFYCN 176
K VH+ VV+S NS+I TR LI+ +
Sbjct: 138 GKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHAR 197
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
G ++ A LF+ M +K +VTWTAM++G+ +Y +D FR M+ G E +++++V+V
Sbjct: 198 LGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAV 257
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
L ACA LGA ELG+W++ + ++ ++ + + AL +MYAKCG I++AL++F + +K+V
Sbjct: 258 LPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDV 317
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
+W+++IGGLA HG EAV +F +M+ G ++P+ +T + +L+ACS+AGL+++G F
Sbjct: 318 ISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFD 377
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
M Y VEP V+HYGC+VDLL R+ + A +++R+MP+ +A +WGSLL+AC S D
Sbjct: 378 RMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGD- 436
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
V+ A +A ERL++LEP + GN V+++N+YAA +W D R+ ++ R++ K PGCS+
Sbjct: 437 --VDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSL 494
Query: 476 IEINDVVHEFMVGDG 490
IE+ +VV EF+ G+G
Sbjct: 495 IEVGNVVREFVAGEG 509
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 189/520 (36%), Positives = 302/520 (58%), Gaps = 47/520 (9%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINP- 94
LL C++L Q HA ++ + D+ + L+ I+S + YA+ +F + +P
Sbjct: 17 LLNHCSNLKHLHQTHAFMLCRALDH---DNLLLSLFIQSSSSLGFSLYAYSLFTSLTHPP 73
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK------ 148
+ F +NT+IR + + I L+ ++ L PDS+++P LKA L K
Sbjct: 74 NIFLYNTIIRALSLSPQPSLSIFLFNRIQSARLRPDSYSFPFALKAVIRLSATKTGLQFH 133
Query: 149 ------GVHS----LVVKSKDFNSVIHSLTR------------------LITFYCNFGDV 180
G+HS LV + ++S S R ++T Y D+
Sbjct: 134 SQAIRFGLHSHLHVLVSLIRMYSSSHISDARKLFDGIPLTARNVALWNAMLTSYAKICDM 193
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
+AQ LFD M ++N+++WTA+I+G+ + I +FR M+ V +E+TL++VLSAC
Sbjct: 194 PNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQNVVPDEITLLAVLSAC 253
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A LGA ELG+W+ +++ + + N L AL DMYAK G I+ AL +F+ + K + TW
Sbjct: 254 AQLGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIFESMKHKTIVTWT 313
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
++I GLA+HG G +A++MF +M+ +KP+++T IAVL+ACSH GL++ + F NMR
Sbjct: 314 TMIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFTNMRSR 373
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
Y ++P ++HYGC++DLL RA L EA ++++ MP EPNA +WGSLL A + D L
Sbjct: 374 YTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHGDAM---L 430
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
E ++ LI+LEP N GNY L+SNIYA+ +W + +R++M++R + K PG S IE+N+
Sbjct: 431 GERTLKHLIELEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDRGVKKIPGGSFIEVNN 490
Query: 481 VVHEFMVGDGRHPCSEEIYSML------EYVAISLREECY 514
V+EF+ G+ HP +EIY ++ ++ SL +EC+
Sbjct: 491 RVNEFIAGETSHPQFDEIYEVIYKINEQSRLSESLEKECF 530
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 177/507 (34%), Positives = 299/507 (58%), Gaps = 52/507 (10%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
+V+ K++HA ++K S + S + K+++ + + YA+L+F ++ +P+ F +N +
Sbjct: 1 MVELKKIHAHVVKFSL---SXSSFLVTKMVDMCNHHGETEYANLLFKRVADPNAFLYNAM 57
Query: 103 IRGYAEAGLGHRGIQLYTQMIG-----NGLDPDSFTYPILLKACGDL------RQVKGVH 151
IR Y + I ++ QM+G N PD FT+P ++K C L +QV G H
Sbjct: 58 IRAYKHNKVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVHG-H 116
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
+ K N+VI + L+ Y + A +F++MTE++ V+W +I+GHV+
Sbjct: 117 AFKFGPKS-NTVIEN--SLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQM 173
Query: 212 REG-------------------------------IDLFRKMRDSGVEVNELTLVSVLSAC 240
R ++ FR+M+ +E++E++LVSVL AC
Sbjct: 174 RRARAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIELDEISLVSVLPAC 233
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A LGA ELGKW+H + +K + + + AL ++YAK G ++E R+F + E++V +W+
Sbjct: 234 AQLGALELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWS 293
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
++I GLA HG EA+++F +MQ + ++P+ +T + +L+AC+HAGL+ +G F +M RD
Sbjct: 294 TMIVGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFESMERD 353
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
+EP V+HYGCLV+LL + LD+A E+I+ MPM+P++ +WG L ++C S N+E+
Sbjct: 354 DNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSH---GNLEI 410
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
IAME L++LEP + GNY+ +SN+YA +WD +MR+LM + + K PGCS IE+++
Sbjct: 411 VAIAMEHLLELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNKTPGCSSIEVDN 470
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVAI 507
+V E+ GD P S+ IY +L+ + +
Sbjct: 471 MVQEYASGDDSKPFSKAIYRVLKLLVM 497
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 289/495 (58%), Gaps = 47/495 (9%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
L+ C +VH +++ + TQ+ L + ++ +A VF Q+ +P+
Sbjct: 21 LRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNA---HRRVTHAARVFAQVRDPNL 77
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP-------DSFTYPILLKACGD---LRQ 146
N +I+ YA+ + +Y +M+ P D FTYP LLKACG L
Sbjct: 78 HLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALEL 137
Query: 147 VKGVHSLVVKSK------DFNSVIHSLTR------------------------LITFYCN 176
K VH+ VV+S NS+I TR LI+ +
Sbjct: 138 GKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHAR 197
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
G ++ A LF+ M +K +VTWTAM++G+ +Y +D FR M+ G E +++++V+V
Sbjct: 198 LGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAV 257
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
L ACA LGA ELG+W++ + ++ ++ + + AL +MYAKCG I++AL++F + +K+V
Sbjct: 258 LPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDV 317
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
+W+++IGGLA HG EAV +F +M+ G ++P+ +T + +L+ACS+AGL+++G F
Sbjct: 318 ISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFD 377
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
M Y VEP V+HYGC+VDLL R+ + A +++R+MP+ +A +WGSLL+AC S D
Sbjct: 378 RMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGD- 436
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
V+ A +A ERL++LEP + GN V+++N+YAA +W D R+ ++ R++ K PGCS+
Sbjct: 437 --VDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSL 494
Query: 476 IEINDVVHEFMVGDG 490
IE+ +VV EF+ G+G
Sbjct: 495 IEVGNVVREFVAGEG 509
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 179/469 (38%), Positives = 280/469 (59%), Gaps = 36/469 (7%)
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK 139
Q+ A +FN++ +++ +I GY + G+ + ++ +M NG+ D +L
Sbjct: 253 QVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLS 312
Query: 140 ACGDLRQVKG---VHSLVVKS--KDF----NSVIH------------------------S 166
AC L VK +H LV++ + + N++IH S
Sbjct: 313 ACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQIS 372
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
+I+ G V+ A+ LFD M EK++V+W+A+I+G+ + + E + LF +M+ +
Sbjct: 373 WNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQI 432
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
+E LVSV+SAC +L A + GKWVH ++ KN + +N LG L DMY KCG +E AL
Sbjct: 433 RPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALE 492
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF + EK V +WN++I GLA++G E ++ MF +M+ +G+ P+++T + VL AC H GL
Sbjct: 493 VFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGL 552
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+++G+ F +M + +EPNVKHYGC+VDLL RA LL+EA ++I +MPM P+ WG+LL
Sbjct: 553 VDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALL 612
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
AC D E+ E +LI+L+P +DG +VL+SNI+A+K W+D ++R +MK++
Sbjct: 613 GACKKHGD---TEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQG 669
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
+VK PGCS+IE N VVHEF+ GD HP ++ ML +A L+ E YA
Sbjct: 670 VVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYA 718
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/509 (26%), Positives = 241/509 (47%), Gaps = 107/509 (21%)
Query: 2 LKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPL-LQKCTHLVQFKQVHAQIIKASFDN 60
L +L +QL+ S +HK + T + L L C +L QF ++ +Q+I F
Sbjct: 12 LMKLSKLNQLSSALKSTFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGF-- 69
Query: 61 RTISDTQLA-KLIESLVNSSQIA--YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQ 117
ISDT A +L++ +S I Y+ +F++I N + F +NT++R Y ++ + +
Sbjct: 70 --ISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALL 127
Query: 118 LYTQMIGNGLDPDSFTYPILLKACG-DLRQVKG--VHSLVVKSKDFNSVIHSLTRLITFY 174
LY M+ N + PD++TYP++++AC L + G +H V+K F+S ++ LI Y
Sbjct: 128 LYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKV-GFDSDVYVQNTLINMY 186
Query: 175 C-------------------------------NFGDVKSAQLLFDQMTEKNVV------- 196
GDV+ A+L+FDQM ++N+V
Sbjct: 187 AVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIV 246
Query: 197 ------------------------TWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
+W+A+I+G+ + Y E + +F +M +G+ ++E+
Sbjct: 247 LLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVV 306
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYA---------------- 276
+VSVLSACA+L + GK +H V + I L AL MY+
Sbjct: 307 VVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSH 366
Query: 277 ---------------KCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
KCG +E+A +F ++ EK++ +W+++I G A H C E + +F +
Sbjct: 367 NLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHE 426
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
MQ+ I+PD+ L++V++AC+H +++GK + +R++ ++ NV L+D+ +
Sbjct: 427 MQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKN-GLKVNVILGTTLLDMYMKCG 485
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
++ A EV M E W +L+ A
Sbjct: 486 CVENALEVFNGME-EKGVSSWNALIIGLA 513
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 125/261 (47%), Gaps = 9/261 (3%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I + + A +F+ + +++ VI GYA+ + L+ +M + PD
Sbjct: 376 MISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPD 435
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
++ AC L Q K VH+ + K+ +VI T L+ Y G V++A +F
Sbjct: 436 ETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILG-TTLLDMYMKCGCVENALEVF 494
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+ M EK V +W A+I G +D+F +M+++GV NE+T + VL AC ++G +
Sbjct: 495 NGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVD 554
Query: 248 LGK-WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGG 305
G+ + K+ I N K + D+ + G + EA ++ + + + +V TW +++G
Sbjct: 555 EGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGA 614
Query: 306 LAIHG---CGEEAVKMFWQMQ 323
HG GE + ++Q
Sbjct: 615 CKKHGDTEMGERVGRKLIELQ 635
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/472 (36%), Positives = 287/472 (60%), Gaps = 12/472 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
K++H+++ KA F SD + LI I A LVF++++ ++ +I G
Sbjct: 348 KEIHSRVAKAGF----TSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGG 403
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNS 162
A++G G + +Y +M G++P+ TY +L AC L + +H VV++ +
Sbjct: 404 LAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEA-GLAT 462
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
H L+ Y G VK A+ +FD+M ++++V + AMI G+ +E + LF +++
Sbjct: 463 DAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQ 522
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ G++ +++T +++L+ACAN G+ E + +H V K + +G AL YAKCG
Sbjct: 523 EEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFS 582
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+A VF+ + ++NV +WN+IIGG A HG G++A+++F +M+M G+KPD VT +++L+ACS
Sbjct: 583 DASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACS 642
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
HAGL+E+G+ F +M +D+ + P ++HYGC+VDLL RA LDEA +I+ MP + N +W
Sbjct: 643 HAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIW 702
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL AC NV +AE A E +KL+ N YV +S++YAA WD A K+R+LM
Sbjct: 703 GALLGACRIH---GNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLM 759
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
++R + K PG S I++ D +H F+ D HP SE+IY+ L+ + +++ + Y
Sbjct: 760 EQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGY 811
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 234/484 (48%), Gaps = 55/484 (11%)
Query: 30 SHHHLPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDT-QLAKLIESLVNSSQIAYAH 85
S ++ +L++C LV +QVH II+ +RT+ D + LI + I A
Sbjct: 23 SSDYMKMLKRCIEVKDLVAGRQVHQHIIQ----HRTVPDQYTVNALINMYIQCGSIEEAR 78
Query: 86 LVFNQI--INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-- 141
V+ ++ + + ++N ++ GY + G + ++L QM +GL PD T L +C
Sbjct: 79 QVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKS 138
Query: 142 -GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
G L + +H +++ V ++ Y G ++ A+ +FD+M +K+VV+WT
Sbjct: 139 PGALEWGREIHFQAMQAGLLFDV-KVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTI 197
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
I G+ ++F+KM GV N +T +SVL+A ++ A + GK VH +
Sbjct: 198 TIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAG 257
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ +G AL MYAKCG ++ +VF+ ++ +++ WN++IGGLA G EEA +++
Sbjct: 258 HESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYN 317
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR--------------------- 359
QMQ G+ P+ +T + +L AC ++ + GKEI + +
Sbjct: 318 QMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCG 377
Query: 360 ---------DYKVEPNVKHYGCLVDLLCRARLLDEA---YEVIRNMPMEPNAVLWGSLLT 407
D V +V + ++ L ++ EA Y+ ++ +EPN V + S+L
Sbjct: 378 SIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILN 437
Query: 408 ACASADDGANVELAEIAMERLIKLEPFND---GNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
AC+S A +E +++++ D GN ++ N+Y+ DA ++ M +
Sbjct: 438 ACSSP---AALEWGRRIHQQVVEAGLATDAHVGNTLV--NMYSMCGSVKDARQVFDRMIQ 492
Query: 465 RNIV 468
R+IV
Sbjct: 493 RDIV 496
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 155/326 (47%), Gaps = 39/326 (11%)
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
G +S Y +LK C DL + VH +++ + +++ LI Y G ++
Sbjct: 17 QGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQ-YTVNALINMYIQCGSIE 75
Query: 182 SAQLLFDQMT--EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
A+ ++ +++ E+ V +W AM+ G+++ + + L R+M+ G+ + T++S LS+
Sbjct: 76 EARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSS 135
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
C + GA E G+ +H + ++ + K+ + +MYAKCG IEEA VF + +K+V +W
Sbjct: 136 CKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSW 195
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI------ 353
IGG A G E A ++F +M+ G+ P+ +T I+VL A S ++ GK +
Sbjct: 196 TITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILN 255
Query: 354 ---------------FYNMRRDYK---------VEPNVKHYGCLVDLLCRARLLDEAYEV 389
Y YK V ++ + ++ L +EA EV
Sbjct: 256 AGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEV 315
Query: 390 IRNMPME---PNAVLWGSLLTACASA 412
M E PN + + LL AC ++
Sbjct: 316 YNQMQREGVMPNKITYVILLNACVNS 341
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 132/255 (51%), Gaps = 16/255 (6%)
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
+D+ + ++ G +VN + +L C + G+ VH+ + ++ + + AL +M
Sbjct: 8 VDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINM 67
Query: 275 YAKCGYIEEALRVFKIV--LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
Y +CG IEEA +V+K + +E+ V +WN+++ G +G E+A+K+ QMQ G+ PD
Sbjct: 68 YIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRT 127
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
T+++ L++C G +E G+EI + + + +VK C++++ + ++EA EV
Sbjct: 128 TIMSFLSSCKSPGALEWGREIHFQAMQA-GLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 393 MPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF----NDGNYVLMSNIYAA 448
M + + V W +T AD G +E A E K+E N Y+ + N +++
Sbjct: 187 ME-KKSVVSW--TITIGGYADCGR----SETAFEIFQKMEQEGVVPNRITYISVLNAFSS 239
Query: 449 KA--QWDDAGKMRRL 461
A +W A R L
Sbjct: 240 PAALKWGKAVHSRIL 254
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 189/524 (36%), Positives = 294/524 (56%), Gaps = 53/524 (10%)
Query: 33 HLPLLQKCTHLVQFKQVHAQIIK-ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
HL L Q C+ + +Q+HA +K A F++ +S LA + +N + YA +F++I
Sbjct: 19 HLSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKIN--DLGYARSIFDRI 76
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVK 148
S +NT+I+ Y E H GI L+ +++ L PD+FT P ++K C G +++ K
Sbjct: 77 QRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGK 135
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK-----------NVVT 197
+H L +K F S + L+ Y G++ A+ +FD M +K N+V+
Sbjct: 136 QIHGLALKI-GFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVS 194
Query: 198 WTAMINGHVKQKNYREGIDLFRKM----------RDSGVEVN------------------ 229
W AMING++K ++ ++LF +M +G E+N
Sbjct: 195 WNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGS 254
Query: 230 ---ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
TLVSVLSA + L G+W+H ++ KN L+ LG +L +MYAKCG IE AL
Sbjct: 255 RPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALT 314
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF+ + +K V W +II GL IHG A+ +F +M +G+KP+ + I VL AC+HAGL
Sbjct: 315 VFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGL 374
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
++ G++ F M +YK+EP ++HYGCLVD+LCRA L+EA I NMP+ PN V+W SLL
Sbjct: 375 VDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLL 434
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
+ + +++ E A +R+I++ P G Y+L+SN+YAA W+ +R +M +R
Sbjct: 435 ---GGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRG 491
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
K+PGCS +E +HEF+VGD HP ++EIY+ + + L+
Sbjct: 492 FRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLK 535
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 199/582 (34%), Positives = 315/582 (54%), Gaps = 85/582 (14%)
Query: 7 PNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDT 66
P H +S + S + K+ HL Q T L KQ HA I++ + D+
Sbjct: 12 PYHHHHHLIPKGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGH----LQDS 67
Query: 67 QLA-KLIESLVNSSQIAYAHL-----VFNQIINPSTFAFN-------------------- 100
+A L++S N S Y VF+ + P+ F +N
Sbjct: 68 YIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYY 127
Query: 101 ---------------TVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSF----------TYP 135
V++ +++G+ G+Q++ ++ +GL D ++
Sbjct: 128 EMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFG 187
Query: 136 ILLKA--------------C------GDLR--QVKGVHSLVVKSKDFNSVIHSLTRLITF 173
L++A C G LR +V+ L D S+I + +I+
Sbjct: 188 RLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPD-RSMISTWNAMISG 246
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
+ G V+ A+ FD+M E++ ++W+AMI+G++++ + E +++F +M+ + + L
Sbjct: 247 FSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVL 306
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
SVLSACANLGA + G+W+H + +N I L+ LG +L DMYAKCG I+ A VF+ +
Sbjct: 307 PSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSN 366
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K V +WN++IGGLA+HG E+A+ +F +M I P+++T + VL AC+H GL++KG I
Sbjct: 367 KEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IYPNEITFVGVLNACAHGGLVQKGLTI 423
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F +MR++Y VEP ++HYGC+VDLL RA LL EA +V+ ++P EP +WG+LL AC
Sbjct: 424 FNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKH- 482
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
NVEL E + L++LEP N G Y L+SNIYA +W++ G++R+LMKER I PG
Sbjct: 483 --GNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGT 540
Query: 474 SVIEIN-DVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
S+I++ VH+F++GDG HP ++IY ML+ V L+ E Y
Sbjct: 541 SIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGY 582
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 292/485 (60%), Gaps = 14/485 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNS---SQIAYAHLVFNQII 92
L+ KC L + Q+ A IK+ ++ + +AKLI S S ++YA +F +
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVSF----VAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKG 149
P FN++ RGY+ L+ +++ +G+ PD++T+P LLKAC L + +
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H L +K + ++ LI Y DV SA+ +FD++ E VV + AMI G+ ++
Sbjct: 151 LHCLSMK-LGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRN 209
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E + LFR+M+ ++ NE+TL+SVLS+CA LG+ +LGKW+H++ K+ K+
Sbjct: 210 RPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNT 269
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DM+AKCG +++A+ +F+ + K+ W+++I A HG E+++ MF +M+ ++P
Sbjct: 270 ALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQP 329
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D++T + +L ACSH G +E+G++ F M + + P++KHYG +VDLL A L++AYE
Sbjct: 330 DEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEF 389
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I +P+ P +LW LL AC+S + N++LAE ER+ +L+ + G+YV++SN+YA
Sbjct: 390 IDKLPISPTPMLWRILLAACSSHN---NLDLAEKVSERIFELDDSHGGDYVILSNLYARN 446
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+W+ +R++MK+R VK PGCS IE+N+VVHEF GDG + +++ L+ + L
Sbjct: 447 KKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKEL 506
Query: 510 REECY 514
+ Y
Sbjct: 507 KLSGY 511
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 179/460 (38%), Positives = 281/460 (61%), Gaps = 10/460 (2%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD D LI+ + I A +F++I ++N +I GYAE G +
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 251
Query: 117 QLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
+L+ M+ + PD T ++ AC G + + VH L + F S + + LI
Sbjct: 252 ELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH-LWIDDHGFGSNLKIVNALIDL 310
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y G++++A LF+++ K+V++W +I G+ Y+E + LF++M SG N++T+
Sbjct: 311 YSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 370
Query: 234 VSVLSACANLGASELGKWVHEFVNKNC--IILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
+S+L ACA+LGA ++G+W+H +++K + L +L DMYAKCG IE A +VF +
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
L K++ +WN++I G A+HG + + +F +M+ GI+PDD+T + +L+ACSH+G+++ G+
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
IF M +DYK+ P ++HYGC++DLL + L EA E+I M MEP+ V+W SLL AC
Sbjct: 491 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 550
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
NVEL E E LIK+EP N G+YVL+SNIYA+ +W++ K R L+ ++ + K P
Sbjct: 551 H---GNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVP 607
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
GCS IEI+ VVHEF++GD HP + EIY MLE + + L +
Sbjct: 608 GCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 238/449 (53%), Gaps = 47/449 (10%)
Query: 6 VPNSQLT-HFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTIS 64
VP+S HF S S + ++H L LL C L + +HAQ+IK N +
Sbjct: 10 VPSSSYPFHFLPS--SSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHN---T 64
Query: 65 DTQLAKLIESLVNSSQ---IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQ 121
+ L+KLIE + S + YA VF I P+ +NT+ RG+A + ++LY
Sbjct: 65 NYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVC 124
Query: 122 MIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVK---------------------- 156
MI GL P+S+T+P +LK+C ++ + +H V+K
Sbjct: 125 MISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR 184
Query: 157 ----SKDFNSVIH----SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
K F+ H S T LI Y + G +++AQ LFD++ K+VV+W AMI+G+ +
Sbjct: 185 LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAET 244
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
NY+E ++LF+ M + V +E T+V+V+SACA G+ ELG+ VH +++ + N K+
Sbjct: 245 GNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV 304
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
AL D+Y+KCG +E A +F+ + K+V +WN++IGG +EA+ +F +M SG
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY-GCLVDLLCRARLLDEAY 387
P+DVT++++L AC+H G I+ G+ I + + K N L+D+ + ++ A+
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAH 424
Query: 388 EVIRNMPMEP----NAVLWGSLLTACASA 412
+V ++ + NA+++G + A A
Sbjct: 425 QVFNSILHKSLSSWNAMIFGFAMHGRADA 453
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 288/532 (54%), Gaps = 58/532 (10%)
Query: 24 SNTATKSHHHL-----PLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNS 78
S ++ H HL L+KC++L KQ+ +I +L + +
Sbjct: 32 SMSSVSIHPHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCN--LTL 89
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDPDSFTYPIL 137
+ + YA +F+ + +P+ F + +I YA LY M+ G + P++F YP +
Sbjct: 90 ADLCYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHV 149
Query: 138 LKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG-DVKSAQLLFDQMTEK 193
L++C D+ K VH+ V+KS F T ++ Y F D+ SA+ +FD+M E+
Sbjct: 150 LRSCPDVLGSNATKMVHTQVLKS-GFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLER 208
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV------------------------- 228
VV+WTAMI+G+ + N+ I+LF M + V
Sbjct: 209 TVVSWTAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMV 268
Query: 229 ---------------NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTD 273
N+ TL S LSAC + G LGKW+H +V K + + AL D
Sbjct: 269 LLALEGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLD 328
Query: 274 MYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM--SGIKPDD 331
MY KCG ++ A RVF ++ KN+ +WNS+I LA+HG A+ +F ++ G+KP++
Sbjct: 329 MYGKCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNE 388
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
VT + VL AC+H GL+EKG F MRRDY +EP ++H+GCL+DLL RA +EA EV+R
Sbjct: 389 VTFVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVR 448
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
M +EP+ V+WGSLL AC +LAE ++++LI+++P N G ++++NIYA +
Sbjct: 449 GMNIEPDEVVWGSLLNACKIH---GRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGK 505
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
WD+ K+RRL+KE+N K PGCS IE+++ V++F D HP EEIY LE
Sbjct: 506 WDEVRKVRRLLKEKNAYKTPGCSWIEVDNQVYQFYSFDMSHPSVEEIYKTLE 557
>gi|224116552|ref|XP_002331925.1| predicted protein [Populus trichocarpa]
gi|222874597|gb|EEF11728.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 191/511 (37%), Positives = 292/511 (57%), Gaps = 43/511 (8%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LLQ C LV KQ+HAQ + I KL+ A VF I +P
Sbjct: 9 LLQSCADLVTLKQIHAQALTQGL--LFIEQPLACKLVNRYAKLGNPRDAQKVFGYIQDPD 66
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHS 152
+ ++I Y L + ++++++ GL PDS + L ACG DL K VH
Sbjct: 67 RVTYTSLINLYLSTQLPIKAFSVFSKLVNEGLRPDSHSVVGALSACGKKQDLLNGKLVHG 126
Query: 153 LVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV---------------- 195
++ + + NS++ + LI YC G++K AQL+F QM K+V
Sbjct: 127 MIFRFQLGANSIVGN--ALIDMYCRNGEIKIAQLVFKQMGIKDVSSWTSLLNGFVMCNGL 184
Query: 196 ---------------VTWTAMINGHVKQKNYREGIDLFRKMRDSGV-EVNELTLVSVLSA 239
V WTAMI G+V+ G+++FR+M+ G + +T V+VLS
Sbjct: 185 ESARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEMFRQMKAEGENQPTVITAVAVLSG 244
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
CA+LGA + G+ VH +++K + + AL DMY+K G +E A+++F +++K+V +W
Sbjct: 245 CADLGAHDHGQAVHGYISKVNLDKGVTVSNALMDMYSKGGCVESAMKIFDRLVKKDVFSW 304
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
++I + HG G A+++F+ M SG+ P+DVT + VL+ CSH+GL+ + ++F M +
Sbjct: 305 TTMISAHSSHGKGNHALEVFYDMLESGVIPNDVTFLLVLSGCSHSGLLVEANKLFNGMIQ 364
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
Y EP ++HYGC+VDLLCRA LL+EA E+I NMPM+P+AV+W SLL+AC + N+
Sbjct: 365 CYGFEPKIEHYGCMVDLLCRAGLLEEAKELIDNMPMDPDAVIWRSLLSACMNQ---RNLG 421
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
LAEIA +++I+LEP +DG YVL+SNIY + DA KMR++M ++ ++K P CS IE+N
Sbjct: 422 LAEIAGKKIIELEPHDDGVYVLLSNIYHVANRMKDARKMRKMMGDQKVMKKPACSYIELN 481
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
VVH+F + H S +IY +LE + LR
Sbjct: 482 GVVHQFHTENATHHASTKIYMLLEMINEHLR 512
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 117/232 (50%), Gaps = 4/232 (1%)
Query: 136 ILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
+LL++C DL +K +H+ + +L+ Y G+ + AQ +F + + +
Sbjct: 8 LLLQSCADLVTLKQIHAQALTQGLLFIEQPLACKLVNRYAKLGNPRDAQKVFGYIQDPDR 67
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
VT+T++IN ++ + + +F K+ + G+ + ++V LSAC GK VH
Sbjct: 68 VTYTSLINLYLSTQLPIKAFSVFSKLVNEGLRPDSHSVVGALSACGKKQDLLNGKLVHGM 127
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
+ + + N +G AL DMY + G I+ A VFK + K+V +W S++ G + E A
Sbjct: 128 IFRFQLGANSIVGNALIDMYCRNGEIKIAQLVFKQMGIKDVSSWTSLLNGFVMCNGLESA 187
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
++F +M +DV A++T G+ +G E+F M+ + + +P V
Sbjct: 188 RRVFDEMPWR----NDVAWTAMITGYVRGGMPIRGLEMFRQMKAEGENQPTV 235
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/486 (36%), Positives = 290/486 (59%), Gaps = 9/486 (1%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+ LL+KC+++ +FKQ HA+I+K + + L +L + + YA +F Q+
Sbjct: 35 VSLLKKCSNMEEFKQSHARILKLGLFGDSFCASNLVATC-ALSDWGSMDYACSIFRQMDE 93
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GV 150
+F FNT++RG+ + + Y +M G+ PD+FTYP LLKAC L V+ V
Sbjct: 94 LGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQV 153
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H+ ++K N V LI+ Y G++ +F+QM E++V +W+A+I H
Sbjct: 154 HAHILKLGLENDVFVQ-NSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGM 212
Query: 211 YREGIDLFRKMRDSGV-EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ + + L M + G E LVSVLSAC +LGA +LG+ VH F+ +N LN +
Sbjct: 213 WSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVET 272
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
+L +MY KCG + + + +F+ + +KN +++ +I GLA+HG G E +++F +M G++P
Sbjct: 273 SLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEP 332
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
DD+ + VL ACSHAGL+++G + F M+ ++ +EP ++HYGC+VDL+ RA +DEA E+
Sbjct: 333 DDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALEL 392
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I++MPMEPN VLW SLL+A + N++ EIA ++L KL+ +YV++SN+YA
Sbjct: 393 IKSMPMEPNDVLWRSLLSASKVHN---NLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQA 449
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+W+D K R M + + + PG S++E+ +H F+ D HP SE +Y ML + L
Sbjct: 450 QRWEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQL 509
Query: 510 REECYA 515
+ E Y+
Sbjct: 510 KFEGYS 515
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/500 (36%), Positives = 290/500 (58%), Gaps = 19/500 (3%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL-VNSSQI 81
+A H L L CT L Q+HA +KA T+L L + +
Sbjct: 18 KPKSAAPQHPLLSHLPHCTSLRGLAQLHAAAVKAGLAAHPALVTRLLTLCTGPGAGPAHL 77
Query: 82 AYAHLVFNQIINPS-TFAFNTVIRGYAEAGLGHRG-----IQLYTQMIGNGLDPDSFTYP 135
AYA VF+++ PS +NT++RGYA + ++++ +M+ G+ PD++T+
Sbjct: 78 AYARQVFDRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEGVAPDTYTFV 137
Query: 136 ILLKACGDLR---QVKGVHSLVVKSKDFNSVIHSLTR--LITFYCNFGDVKSAQLLFDQM 190
LLKAC R + H++ VK + H R LI Y GD ++A++ F +
Sbjct: 138 SLLKACAAARAGEHGRQAHAVAVK---LGAAGHDYVRPTLINMYAECGDARAARVTFGRA 194
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
VV++ AMI V+ E + LFR+M+ G+ +T++SVLSACA LGA +LG+
Sbjct: 195 DGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGR 254
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
W+H++V K + K+ AL DMYAKCG +E+A+ VF+ + ++ W+ +I A HG
Sbjct: 255 WLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHG 314
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
G EA+ +F +M+ G+KPDD+T + +L ACSH+GL+ +G F +M+ D+ + P +KHY
Sbjct: 315 YGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMK-DHGIVPGIKHY 373
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
GC+ DLL R+ L+ AY+ I +P+ P +LW +LL+AC D VEL + ER+++
Sbjct: 374 GCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGD---VELGKRVFERILE 430
Query: 431 LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
L+ + G+YV+ SN+ A W++ ++R+LM ++ +VK PGCS IEI++ VHEF GDG
Sbjct: 431 LDDSHGGDYVIFSNLCANTGYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFFAGDG 490
Query: 491 RHPCSEEIYSMLEYVAISLR 510
RHP S+E M++ V L+
Sbjct: 491 RHPKSQEARKMVDEVIDQLK 510
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/407 (42%), Positives = 257/407 (63%), Gaps = 19/407 (4%)
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLK---ACGDLRQV----KGVHSLVVKSKDFNSVIHSL 167
G+Q++ +++ +G+ PD L+ CGD+ +G+ + S + SVI L
Sbjct: 180 GMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMAS--WTSVISGL 237
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
R G V A+ LFD M E++ + WTAMI+G+V+ +R+ ++ FR M+ V
Sbjct: 238 VR-------SGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVR 290
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+E T+VSV++ACA LGA E G+W ++ + I ++ +G AL DMY+KCG IE AL V
Sbjct: 291 ADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDV 350
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
FK + ++ TW +II GLA++G GEEA+ MF++M + PD+VT + VLTAC+HAGL+
Sbjct: 351 FKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLV 410
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
+KG+E F +M Y + P V HYGCL+D+L RA L EA + I MPM+PN+ +WG+LL
Sbjct: 411 DKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLA 470
Query: 408 ACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
+C N E+ E+A ERL++L+P N Y+L+SN+YA +W D ++R+++ E+ I
Sbjct: 471 SCRVY---GNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGI 527
Query: 468 VKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
K PGCS+IE+N ++HEF+ D HP ++EIYS LE V LR Y
Sbjct: 528 KKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNAGY 574
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 145/318 (45%), Gaps = 45/318 (14%)
Query: 119 YTQMIGNGLDPDSFTYPILLKACGDLRQVKG--------VHSLVVKSKDFNSVIHSLTRL 170
Y +M+ G PD++T+P LLKA R +H+ VVK S H+ + L
Sbjct: 39 YVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKF-GMESNAHAASSL 97
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKN----VVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
I Y GD +A+ + + V W A+I+GH + + F M +
Sbjct: 98 IVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHNRSGRFELSCCSFVDMVRASA 157
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
+T VSVLSAC LG VH+ V ++ ++ + ++ AL DMYA+CG ++ A
Sbjct: 158 MATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWV 217
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF----------WQ--------------- 321
+F+ + +++ +W S+I GL G + A +F W
Sbjct: 218 LFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDA 277
Query: 322 ------MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
MQ+ ++ D+ T+++V+TAC+ G +E G+ M R ++ +V L+D
Sbjct: 278 LETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGR-LGIKMDVFVGNALID 336
Query: 376 LLCRARLLDEAYEVIRNM 393
+ + ++ A +V ++M
Sbjct: 337 MYSKCGSIERALDVFKDM 354
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 125/279 (44%), Gaps = 18/279 (6%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I LV S Q+ A +F+ + T A+ +I GY + G ++ + M + D
Sbjct: 233 VISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRAD 292
Query: 131 SFTYPILLKACGDLRQVK-GVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
FT ++ AC L ++ G + + + + LI Y G ++ A +F
Sbjct: 293 EFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFK 352
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
M ++ TWTA+I G E ID+F +M + +E+T V VL+AC + G +
Sbjct: 353 DMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDK 412
Query: 249 GK----WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSII 303
G+ + E N + +++ L D+ + G ++EAL K+ ++ N W +++
Sbjct: 413 GREFFLSMTEAYNISPTVVHY---GCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLL 469
Query: 304 GGLAIHG---CGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
++G GE A + ++ PD+ T +L+
Sbjct: 470 ASCRVYGNSEIGELAAERLLELD-----PDNSTAYILLS 503
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/495 (35%), Positives = 288/495 (58%), Gaps = 47/495 (9%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
L+ C +VH +++ + TQ+ L + ++ +A VF Q+ +P+
Sbjct: 21 LRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNA---HRRVTHAARVFAQVRDPNL 77
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP-------DSFTYPILLKACGD---LRQ 146
N +I+ YA+ + +Y +M+ P D FTYP LLKACG L
Sbjct: 78 HLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALEL 137
Query: 147 VKGVHSLVVKSK------DFNSVIHSLTR------------------------LITFYCN 176
K VH+ VV+S NS+I TR LI+ +
Sbjct: 138 GKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHAR 197
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
G ++ A LF+ M +K +VTWTAM++G+ +Y +D FR M+ G E +++++V+V
Sbjct: 198 LGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAV 257
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
L ACA LG ELG+W++ + ++ ++ + + AL +MYAKCG I++AL++F + +K+V
Sbjct: 258 LPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDV 317
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
+W+++IGGLA HG EAV +F +M+ G ++P+ +T + +L+ACS+AGL+++G F
Sbjct: 318 ISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFD 377
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
M Y VEP V+HYGC+VDLL R+ + A +++R+MP+ +A +WGSLL+AC S D
Sbjct: 378 RMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGD- 436
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
V+ A +A ERL++LEP + GN V+++N+YAA +W D R+ ++ R++ K PGCS+
Sbjct: 437 --VDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSL 494
Query: 476 IEINDVVHEFMVGDG 490
IE+ +VV EF+ G+G
Sbjct: 495 IEVGNVVREFVAGEG 509
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/479 (37%), Positives = 289/479 (60%), Gaps = 13/479 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
L LLQ C + + ++HA I+ + N +IS+ L S+ S +AYA LVF++I
Sbjct: 27 LSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSV--SGSLAYAQLVFHRIH 84
Query: 93 NPSTFAFNTVIRGYAEAG--LGHRGIQLYTQMI-GNGLDPDSFTYPILLKACGDLRQ--- 146
NP T A+N++IRG++++ L + I Y M+ + PD++T+ LLKAC + ++
Sbjct: 85 NPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGK 144
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+ VH +++ ++ + T LI Y G +++A +F++M +++V+W +MI+ +
Sbjct: 145 CREVHGFIIRF-GYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYC 203
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ + E + ++ +MR S V + TLVS+LS+CA++GA +G +H F + ++ N
Sbjct: 204 QTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIF 263
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+G AL DMYAKCG + AL +F + +++V TWNS+I G +HG G+EA+ F M M+G
Sbjct: 264 VGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAG 323
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
++P+ +T + +L CSH GL+++G + F+ M ++ ++P +KHYGC+VDL RA L EA
Sbjct: 324 VRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEA 383
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
EVIR+ P + + VLW +LL +C NVE+ E+AM L++L G+ VL+S IY
Sbjct: 384 LEVIRSSPSQHDPVLWRTLLGSCKIHR---NVEIGEMAMRNLVQLGSLGAGDCVLLSGIY 440
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
A +MR+L++ R I PG S IE+ D VH F+V D HP S EIY LE V
Sbjct: 441 AEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEV 499
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 194/529 (36%), Positives = 301/529 (56%), Gaps = 42/529 (7%)
Query: 24 SNTATKSHHHLP------LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVN 77
S TAT P L+ K + + Q+HA I++ + KL + +
Sbjct: 17 STTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYAS 76
Query: 78 SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPIL 137
+I ++ +F+Q I+P F F I + GL + LY Q++ + ++P+ FT+ L
Sbjct: 77 HGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSL 136
Query: 138 LKACGDLRQVKGVHSLVVK--------------------------SKDFNSV----IHSL 167
LK+C + K +H+ V+K K F+ + + S
Sbjct: 137 LKSCST-KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSS 195
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG-V 226
T +IT Y G+V++A+ LFD M E+++V+W MI+G+ + + + LF+K+ G
Sbjct: 196 TAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKP 255
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
+ +E+T+V+ LSAC+ +GA E G+W+H FV + I LN K+ L DMY+KCG +EEA+
Sbjct: 256 KPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVL 315
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ-MSGIKPDDVTLIAVLTACSHAG 345
VF K++ WN++I G A+HG ++A+++F +MQ ++G++P D+T I L AC+HAG
Sbjct: 316 VFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAG 375
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
L+ +G IF +M ++Y ++P ++HYGCLV LL RA L AYE I+NM M+ ++VLW S+
Sbjct: 376 LVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSV 435
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L +C D V EIA E LI L N G YVL+SNIYA+ ++ K+R LMKE+
Sbjct: 436 LGSCKLHGD--FVLGKEIA-EYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEK 492
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
IVK PG S IEI + VHEF GD H S+EIY+ML ++ ++ Y
Sbjct: 493 GIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGY 541
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 191/485 (39%), Positives = 280/485 (57%), Gaps = 15/485 (3%)
Query: 41 THLVQFKQVHAQIIKA-SFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAF 99
T + Q Q+HA+I+K+ ++D+ D +L S + YA + + P++F +
Sbjct: 4 TSMTQAMQLHARILKSGAYDSNHGQDFHKLFTFSALSPSGDLNYARHILRTLHTPNSFYY 63
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGNGLD-------PDSFTYPILLKAC---GDLRQVKG 149
NT+IR Y+++ R L+ M N D PD FTYP +LKAC G R K
Sbjct: 64 NTMIRAYSDSTDPTRAFTLFLYM-QNPDDASVAVPRPDHFTYPFVLKACSKSGHARFGKQ 122
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H LV KS S + LI Y G+ A +FD+M +++VV+WT++I+G V
Sbjct: 123 IHGLVFKSG-VGSDRYINNALIHLYSVSGEPNLAYKVFDKMPDRDVVSWTSIIDGFVDND 181
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E I LF M ++G+E NE+T+ SVL ACA+ GA G+ +H FV + N +
Sbjct: 182 RPIEAIRLFTHMIENGIEPNEVTVASVLRACADTGALNTGERIHSFVKEKNFSSNANVST 241
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG I+ AL VF LEK+V W +II GLA HG +A++ F M+ S +K
Sbjct: 242 ALIDMYAKCGCIDGALEVFDETLEKDVYVWTAIIAGLASHGLCMKAIEFFENMKKSDVKM 301
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D+ + AVL+A +AGL+ +G +F+ + +K++P ++HYGC+VD+L RA L +A E
Sbjct: 302 DERAITAVLSAYRNAGLVSEGL-LFFRRLKKHKIKPTIQHYGCVVDMLTRAGRLKDAEEF 360
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
IR MP+EP+AVLW +L+ C D E +E L+ ++ + G+YVL+ N+YAA
Sbjct: 361 IRKMPIEPDAVLWRTLIWGCKILGDVERSERLVRELE-LLNMDSRDTGSYVLLENVYAAT 419
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+W++ K R LM +R ++K P CS IEI+ VVHEF GD RH + +Y LE V L
Sbjct: 420 GKWEEKAKTRELMYQRGLMKPPACSRIEIDGVVHEFTAGDSRHDEATAVYEKLEDVEERL 479
Query: 510 REECY 514
R E Y
Sbjct: 480 RGEGY 484
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/474 (37%), Positives = 284/474 (59%), Gaps = 14/474 (2%)
Query: 46 FKQVHAQIIK--ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
K+ HA+I +D+R L K V+ ++I A +VF I NP +F +N +I
Sbjct: 736 LKKTHAKIFAYGLQYDSRI-----LTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMI 790
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDF 160
RG+A G ++LY++M+ GL PD F +P LK+C DL++ K +H +V
Sbjct: 791 RGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCS 850
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
N + L+ Y GD+++A+L+FD+M +++V+WT+MI+G+ E + F
Sbjct: 851 NDLFVD-AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDL 909
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
MR SGV N ++++SVL AC NLGA G+W H +V + + + A+ DMY+KCG
Sbjct: 910 MRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGS 969
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
++ A +F K++ W+++I IHG G +A+ +F QM +G++P VT VL+A
Sbjct: 970 LDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSA 1029
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
CSH+GL+E+GK F M ++ + + +Y C+VDLL RA L EA ++I NMP+EP+A
Sbjct: 1030 CSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDAS 1089
Query: 401 LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRR 460
+WGSLL AC + N++LAE + L L+P + G +VL+SNIYAAK++W++ K+R+
Sbjct: 1090 IWGSLLGACRIHN---NLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRK 1146
Query: 461 LMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+M R K G S++E ++ VH+F VGD HP E++Y+ LE +A ++ Y
Sbjct: 1147 MMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGY 1200
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 156/492 (31%), Positives = 276/492 (56%), Gaps = 22/492 (4%)
Query: 34 LPLLQKCTHLVQFKQ---VHAQIIKASFDNRTISDTQLAKLIESLVN----SSQIAYAHL 86
+ ++ C L+ K VH +I+ FD L+ SL+N + A
Sbjct: 210 VSVVSACAQLLNVKAGSCVHGLVIRREFDGDL-------PLVNSLLNLYAKTGCEKIAAN 262
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---D 143
+F+++ +++T+I YA + + L+ +MI +P+S T L+AC +
Sbjct: 263 LFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRN 322
Query: 144 LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
L + K +H + V K F T LI Y A LF ++ +K+VV+W A+++
Sbjct: 323 LEEGKKIHKIAV-WKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLS 381
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
G+ + + + +FR M G++ + + +V +L+A + LG + +H +V ++
Sbjct: 382 GYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNS 441
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM- 322
N +GA+L ++Y+KCG + +A+++FK ++ ++V W+S+I IHG G EA+++F QM
Sbjct: 442 NVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMV 501
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
+ S ++P++VT +++L+ACSHAGL+E+G +IF M DY++ P+ +H+G +VDLL R
Sbjct: 502 KNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQ 561
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLM 442
L +A ++I MP+ +WG+LL AC N+E+ E A + L L+P + G Y+L+
Sbjct: 562 LGKAMDIINRMPIPAGPHVWGALLGACRIHH---NIEMGEAAAKNLFWLDPSHAGYYILL 618
Query: 443 SNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
SNIYA +WD+ ++R +KER + K G S++E+ VH F+ D HP S++IY +L
Sbjct: 619 SNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELL 678
Query: 503 EYVAISLREECY 514
+ + +E Y
Sbjct: 679 RKLEAQMGKEVY 690
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 191/385 (49%), Gaps = 20/385 (5%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L Q C + Q+H+Q+ K + T T+L L + + A VF++ +P+
Sbjct: 10 LFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSL---YAKCASLQAARKVFDETPHPN 66
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKACGDLRQV---KGVH 151
+N+ +R Y ++L+ MI G PD+FT PI LKAC LR + K +H
Sbjct: 67 VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIH 126
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
K+ + S + + L+ Y G + A +F++ + V WT+M+ G+ + +
Sbjct: 127 GFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDP 186
Query: 212 REGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E + LF +M V ++ +TLVSV+SACA L + G VH V + + L +
Sbjct: 187 EEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNS 246
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L ++YAK G + A +F + EK+V +W+++I A + EA+ +F +M +P+
Sbjct: 247 LLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPN 306
Query: 331 DVTLIAVLTACSHAGLIEKGKEI-----FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
VT+++ L AC+ + +E+GK+I + D+ V L+D+ + DE
Sbjct: 307 SVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVST------ALIDMYMKCSCPDE 360
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACA 410
A ++ + +P + + V W +LL+ A
Sbjct: 361 AVDLFQRLP-KKDVVSWVALLSGYA 384
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 177/347 (51%), Gaps = 13/347 (3%)
Query: 69 AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-- 126
+ L+E Q+ A VF + P T + +++ GY + + L++QM+
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCV 202
Query: 127 -LDPDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
LDP T ++ AC L VK VH LV++ ++F+ + + L+ Y G K
Sbjct: 203 VLDP--VTLVSVVSACAQLLNVKAGSCVHGLVIR-REFDGDLPLVNSLLNLYAKTGCEKI 259
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A LF +M EK+V++W+ MI + + E ++LF +M + E N +T+VS L ACA
Sbjct: 260 AANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 319
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
E GK +H+ L+ + AL DMY KC +EA+ +F+ + +K+V +W ++
Sbjct: 320 SRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVAL 379
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDY 361
+ G A +G +++ +F M GI+PD V ++ +L A S G+ ++ + Y +R +
Sbjct: 380 LSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGF 439
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
NV L++L + L +A ++ + M + + V+W S++ A
Sbjct: 440 N--SNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAA 483
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 150/288 (52%), Gaps = 9/288 (3%)
Query: 137 LLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVV 196
L +AC + R V +HS V K+ + + T+L + Y +++A+ +FD+ NV
Sbjct: 10 LFQACNNGRSVSQLHSQVFKTGILHDTFFA-TKLNSLYAKCASLQAARKVFDETPHPNVH 68
Query: 197 TWTAMINGHVKQKNYREGIDLFRKMR-DSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
W + + + ++K + E + LF M +G + T+ L ACA L ELGK +H F
Sbjct: 69 LWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGF 128
Query: 256 VNKNCIILNDKL-GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
KN I +D G+AL ++Y+KCG + EAL+VF+ + W S++ G + EE
Sbjct: 129 AKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEE 188
Query: 315 AVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGC 372
A+ +F QM M + D VTL++V++AC+ ++ G + +RR++ + ++
Sbjct: 189 ALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREF--DGDLPLVNS 246
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
L++L + A + MP E + + W +++ AC + ++ AN L
Sbjct: 247 LLNLYAKTGCEKIAANLFSKMP-EKDVISWSTMI-ACYANNEAANEAL 292
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/479 (37%), Positives = 289/479 (60%), Gaps = 13/479 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
L LLQ C + + ++HA I+ + N +IS+ L S+ S +AYA LVF++I
Sbjct: 9 LSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSV--SGSLAYAQLVFHRIH 66
Query: 93 NPSTFAFNTVIRGYAEAG--LGHRGIQLYTQMI-GNGLDPDSFTYPILLKACGDLRQ--- 146
NP T A+N++IRG++++ L + I Y M+ + PD++T+ LLKAC + ++
Sbjct: 67 NPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGK 126
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+ VH +++ ++ + T LI Y G +++A +F++M +++V+W +MI+ +
Sbjct: 127 CREVHGFIIRF-GYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYC 185
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ + E + ++ +MR S V + TLVS+LS+CA++GA +G +H F + ++ N
Sbjct: 186 QTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIF 245
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+G AL DMYAKCG + AL +F + +++V TWNS+I G +HG G+EA+ F M M+G
Sbjct: 246 VGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAG 305
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
++P+ +T + +L CSH GL+++G + F+ M ++ ++P +KHYGC+VDL RA L EA
Sbjct: 306 VRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEA 365
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
EVIR+ P + + VLW +LL +C NVE+ E+AM L++L G+ VL+S IY
Sbjct: 366 LEVIRSSPSQHDPVLWRTLLGSCKIHR---NVEIGEMAMRNLVQLGSLGAGDCVLLSGIY 422
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
A +MR+L++ R I PG S IE+ D VH F+V D HP S EIY LE V
Sbjct: 423 AEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEV 481
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/531 (36%), Positives = 306/531 (57%), Gaps = 42/531 (7%)
Query: 22 KNSNTATKSHHHLP------LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL 75
+N TAT S + P + + + Q+HA I++ + KL +
Sbjct: 13 QNHATATASFRNPPPEKLAVFIDNSHSVDEVLQIHAAILRHNLLIHPRYPVLNLKLHRAY 72
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYP 135
+ +I ++ +F+Q I+P F F I + GL + LY Q++ + ++P+ FT+
Sbjct: 73 ASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTFS 132
Query: 136 ILLKACGDLRQVKGVHSLVVK--------------------------SKDFNSV----IH 165
+LK+C + K +H+ V+K K F+ + +
Sbjct: 133 SILKSCST-KSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLV 191
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-RDS 224
S T +IT Y G+V++A+ LFD+M E+++V+W MI+G+ + + + LF+K+ D
Sbjct: 192 SSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADG 251
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
+ +E+T+V+ LSAC+ +GA E G+W+H FVN + I LN K+ AL DMY+KCG +EEA
Sbjct: 252 KPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEA 311
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ-MSGIKPDDVTLIAVLTACSH 343
+ VF K++ WN++I G A+HG ++A+++F +MQ ++G++P D+T I L AC+H
Sbjct: 312 VLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAH 371
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
AGL+ +G +IF +M ++Y ++P ++HYGCLV LL RA L AYE+I+NM ME ++VLW
Sbjct: 372 AGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWS 431
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
S+L +C G + EIA E LI N G YVL+SNIYA ++ K+R LMK
Sbjct: 432 SVLGSCKL--HGEFMLGKEIA-EYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMK 488
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
E+ IVK PG S IEI++ VHEF GD H S+EIY+ML ++ ++ Y
Sbjct: 489 EKGIVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIKSHGY 539
>gi|449519932|ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/492 (37%), Positives = 282/492 (57%), Gaps = 6/492 (1%)
Query: 16 NSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL 75
N N + H L LL+ C+ ++HAQI+ + N + T+L + + +L
Sbjct: 16 NVHNYSSKPKFLSTKHQLLSLLKHCSSTNHLFEIHAQILVSGLQNDSFFTTELLR-VAAL 74
Query: 76 VNSSQIAYA-HLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
S ++Y L+F+ + +T +N +IRGY+ + I L+ +M G+ P++ T+
Sbjct: 75 SPSRNLSYGCSLLFHCHFHSATMPWNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTF 134
Query: 135 PILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
P LLKAC L ++ K H++ +K + ++ LI FY + + A+ +FD+MT
Sbjct: 135 PFLLKACATLATLQEGKQFHAIAIKC-GLDLDVYVRNTLINFYGSCKRMSGARKVFDEMT 193
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
E+ +V+W A+I V+ + E ID F KM + G E +E T+V +LSACA LG LG+W
Sbjct: 194 ERTLVSWNAVITACVENFCFDEAIDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGRW 253
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
VH V ++LN +LG A DMYAK G + A VF + +K+V TW+++I GLA HG
Sbjct: 254 VHSQVVGRGMVLNVQLGTAFVDMYAKSGDVGCARHVFNCLKQKSVWTWSAMILGLAQHGF 313
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
EA+++F M S I P+ VT I VL ACSHAGL++K F M R Y ++P + HYG
Sbjct: 314 ANEAIELFTNMTSSPIVPNHVTFIGVLCACSHAGLVDKSYHYFNLMERVYGIKPMMIHYG 373
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
+VD+L RA + EAYE+I +MP+EP+ ++W +LL+AC+ D E+AE A +RL++L
Sbjct: 374 SMVDVLGRAGQVKEAYELIMSMPVEPDPIVWRTLLSACSGRDVNGGAEVAEEARKRLLEL 433
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
EP GN V+++N +A W A RR MK+R I K G S IE+ + +F G
Sbjct: 434 EPKRGGNVVMVANKFAELGMWKQAADYRRTMKDRGIKKMAGESCIELGGSLRKFFSGFDS 493
Query: 492 HPCSEEIYSMLE 503
+ IY +L+
Sbjct: 494 RAAPDGIYDLLD 505
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/415 (40%), Positives = 265/415 (63%), Gaps = 11/415 (2%)
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVK-S 157
+IR E+G+ + Y+ M+ N + P ++ ++L++C G+ + + H ++K
Sbjct: 1 MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMG 60
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV--VTWTAMINGHVKQKNYREGI 215
+++ ++ T L+ FY G V+ A+ LFD MTE+N VTW MI+ +V+ + I
Sbjct: 61 FEYDMILQ--TGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAI 118
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
+F++M+ V+ E+T+VS+LSACA+LGA ++G+W+H ++ + ++ LG AL DMY
Sbjct: 119 SMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMY 178
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
KCG +E A+ VF + KN+ WNSII GL ++G GEEA+ F M+ GIKPD VT +
Sbjct: 179 CKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFV 238
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
+L+ CSH+GL+ G+ F M Y +EP V+HYGC+VDLL RA L EA E+IR MPM
Sbjct: 239 GILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPM 298
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
+PN+++ GSLL AC D +L E ++L++L+P + GNYV +SN+YA+ ++WDD
Sbjct: 299 KPNSMVLGSLLRACQIHKD---TKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDV 355
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
R+LM +R + K PGCS IE+N++VHEF+ GD HP +I + L+ +A L+
Sbjct: 356 NTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELK 410
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 178/482 (36%), Positives = 274/482 (56%), Gaps = 43/482 (8%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L+ K + Q+HA + + D+ I + +L + SL ++ Y+ +F + NPS
Sbjct: 36 LIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASL---GRLDYSVALFGRTQNPS 92
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVV 155
F + +I G+A G QL+ M P+ SLV
Sbjct: 93 VFFWTAIIHGHALRGDVVSAQQLFDTM------PEK--------------------SLV- 125
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
SLT ++T Y G++ +A++LFD M E++ V W MI+G+ + E +
Sbjct: 126 ----------SLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEAL 175
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
LFR+M + + NE+T++SVLSAC LGA E G+WVH ++ N I N +G AL DMY
Sbjct: 176 VLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMY 235
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
+KCG +E+A VF + +K+V WNS+I G A+HG +EA+++F M G+ P ++T I
Sbjct: 236 SKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFI 295
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
+L+AC H+G + +G +IF M+ +Y +EP ++HYGC+V+LL RA +++AYE+++NM +
Sbjct: 296 GILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNI 355
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
EP+ VLWG+LL AC + L E +E L+ N G Y+L+SNIYAA WD
Sbjct: 356 EPDPVLWGTLLGACRLH---GKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGV 412
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
++R +MK+ + K PGCS IE+N+ VHEF+ G HP +EIY MLE + L+ Y
Sbjct: 413 ARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYT 472
Query: 516 AR 517
+
Sbjct: 473 PQ 474
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 181/512 (35%), Positives = 293/512 (57%), Gaps = 25/512 (4%)
Query: 7 PNSQLTHFTNSANSHKNSNTATKSHHHLP----LLQKCTHLVQFKQVHAQIIKASFDNRT 62
P QLT F S NT T S LP L+ KCT L + KQ+ A IK ++ N T
Sbjct: 4 PILQLTSF-----SLTKPNTETTSLLPLPHLISLIPKCTTLKELKQIQAYTIKTNYQNNT 58
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
T+ S + + +AH +F+QI P+ FNT+ RGYA R I + +
Sbjct: 59 NVITKFINFCTSNPTKASMEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRRC 118
Query: 123 IGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
+ L+ L + K +H VK + ++ + LI Y GD+ +
Sbjct: 119 LR------------LVSKVKALAEGKQLHCFAVKL-GVSDNMYVVPTLINMYTACGDIDA 165
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
++ +FD++ E VV + A+I + E + LFR++++ G++ ++T++ VLS+CA
Sbjct: 166 SRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCAL 225
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
LG+ +LG+W+HE+V K K+ L DMYAKCG +++A+ VF+ + +++ W++I
Sbjct: 226 LGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAI 285
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
I A HG G +A+ M +M+ ++PD++T + +L ACSH GL+E+G E F+ M +Y
Sbjct: 286 IVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYG 345
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
+ P++KHYGC+VDLL RA LDEAY+ I +P++P +LW +LL+AC++ NVE+ +
Sbjct: 346 IVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTH---GNVEMGK 402
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
+ER+ +L+ + G+YV+ SN+ A +WDD +R+ M ++ VK PGCS IE+N+VV
Sbjct: 403 RVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVV 462
Query: 483 HEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
HEF G+G H S ++ L+ + L+ Y
Sbjct: 463 HEFFAGEGVHSTSTTLHRALDELVKELKSAGY 494
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 187/530 (35%), Positives = 305/530 (57%), Gaps = 47/530 (8%)
Query: 28 TKSHHHLPLL-----QKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
T H P L + L K++H ++K + L K+ SL +A
Sbjct: 131 TPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMY-SLCGLMDMA 189
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG 142
VF++ F++N +I GY I+L +M N + P S T ++L AC
Sbjct: 190 RG--VFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACS 247
Query: 143 DLRQ---VKGVHSLVVKSKD--------------------------FNSV----IHSLTR 169
++ K VH V + K F S+ + S T
Sbjct: 248 KVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTS 307
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
++ Y G++K A+ FDQM ++ ++WT MI+G+++ + E +++FR+M+ +G+ +
Sbjct: 308 IVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
E T+VSVL+ACA+LG+ E+G+W+ +++KN I + +G AL DMY KCG E+A +VF
Sbjct: 368 EFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ +++ TW +++ GLA +G G+EA+K+F+QMQ I+PDD+T + VL+AC+H+G++++
Sbjct: 428 DMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQ 487
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
++ F MR D+++EP++ HYGC+VD+L RA L+ EAYE++R MPM PN+++WG+LL A
Sbjct: 488 ARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGAS 547
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
+D +AE+A +++++LEP N Y L+ NIYA +W D ++RR + + I K
Sbjct: 548 RLHNDEP---MAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKK 604
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARMP 519
PG S+IE+N HEF+ GD H SEEIY LE +A +E +AA +P
Sbjct: 605 TPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELA---QESTFAAYLP 651
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 218/444 (49%), Gaps = 41/444 (9%)
Query: 8 NSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQ-IIKASFDNRTISDT 66
NS+L+ F S + + + +L C QFKQ+H+Q I + N T
Sbjct: 12 NSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKK 71
Query: 67 QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG 126
L ++YA+ +F +I P +N +I+G+++ G++LY M+ G
Sbjct: 72 LFVFWCSRL--GGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEG 129
Query: 127 LDPDSFTYPILLKAC----GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
+ PDS T+P LL G L K +H VVK S ++ L+ Y G +
Sbjct: 130 VTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKF-GLGSNLYVQNALVKMYSLCGLMDM 188
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A+ +FD+ +++V +W MI+G+ + K Y E I+L +M + V +TL+ VLSAC+
Sbjct: 189 ARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK 248
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
+ +L K VHE+V++ + +L AL + YA CG ++ A+R+F+ + ++V +W SI
Sbjct: 249 VKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSI 308
Query: 303 IGGLAIH-------------------------------GCGEEAVKMFWQMQMSGIKPDD 331
+ G GC E++++F +MQ +G+ PD+
Sbjct: 309 VKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDE 368
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
T+++VLTAC+H G +E G+ I + ++ K++ +V L+D+ + ++A +V
Sbjct: 369 FTMVSVLTACAHLGSLEIGEWIKTYIDKN-KIKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Query: 392 NMPMEPNAVLWGSLLTACASADDG 415
+M + + W +++ A+ G
Sbjct: 428 DMD-QRDKFTWTAMVVGLANNGQG 450
>gi|242054761|ref|XP_002456526.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
gi|241928501|gb|EES01646.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
Length = 552
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 183/495 (36%), Positives = 303/495 (61%), Gaps = 24/495 (4%)
Query: 32 HHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYA------H 85
H + LL+ C L+ + HA + + R + L+KL+ + ++ A
Sbjct: 20 HVVSLLRGCRGLLALRSAHAHLTRLRLP-RLTAAFALSKLLAACASAPAPPAAAASSYAR 78
Query: 86 LVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQ-LYTQMIGNGLD-PDSFTYPILLKAC-- 141
+F+QI +P+ F +N++IR AG +Y M+ G P++FT LKAC
Sbjct: 79 TLFDQIPDPTAFCYNSLIRALPAAGAAPAPALAVYRLMLRAGSPRPNTFTLAFALKACAA 138
Query: 142 ----GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKNVV 196
G+ RQ+ H+ ++ + + + T L+ Y V A+ +FD M +K++V
Sbjct: 139 VPAPGEGRQL---HAQALR-QGLEASAYVQTGLLNLYAKCEQVALARTVFDGMAPDKSLV 194
Query: 197 TWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV 256
W+AMING+ + E + LFR+M+ GVE +E+T+V V+SACA GA +LGKWVH ++
Sbjct: 195 AWSAMINGYSRVGMVTEALGLFREMQAVGVEPDEVTMVGVISACAKAGALDLGKWVHAYI 254
Query: 257 NKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAV 316
++ I ++ +L AL DMYAKCG IE A VF ++EK+ W+++I G AIHG E+A+
Sbjct: 255 DRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDAL 314
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDL 376
+F +M ++P++VT I VL+AC+H+GL++ G+ ++++ ++ ++P++++YGC++DL
Sbjct: 315 GLFSRMLELKVRPNNVTFIGVLSACAHSGLVDDGRR-YWSIMQNLGIKPSMENYGCMIDL 373
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFND 436
LCR+ LLD+AY + +MP+ PN+++W +LL AC S++ +++AE A +RL++LEP N
Sbjct: 374 LCRSGLLDDAYSFVIDMPISPNSIIWRTLLVACKSSN---RIDIAESASKRLLELEPHNP 430
Query: 437 GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSE 496
NYVL+SN+ A+ +QWD +R+ MK+ N+ GCS IEIN +HEF+V D HP +
Sbjct: 431 ENYVLLSNLCASNSQWDRVSYLRKKMKDSNVTAVAGCSSIEINGYLHEFVVSDDSHPEIK 490
Query: 497 EIYSMLEYVAISLRE 511
EI +L +A +R
Sbjct: 491 EIRLVLREIADRVRR 505
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 181/525 (34%), Positives = 301/525 (57%), Gaps = 47/525 (8%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQ--IAYAHLV 87
H + LL + +Q+HA++ + + T+ D L ++++ S + YA+ +
Sbjct: 7 HPAIALLDSGITFKEVRQIHAKL----YVDGTLKDDHLVGHFVKAVALSDHKYLDYANQI 62
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI--GNGLDPDSFTYPILLKACGDLR 145
++ P+ FA N++IR + ++ + + Y +++ GN L PD++T L++AC LR
Sbjct: 63 LDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLR 122
Query: 146 QVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFG------------------------ 178
+ VH + ++ + F++ H T LI+ Y G
Sbjct: 123 MRETGLQVHGMTIR-RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMV 181
Query: 179 -------DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
DV A+ LF+ M E++ + W AMI+G+ + RE +++F M+ GV+VN +
Sbjct: 182 TACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGV 241
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
++SVLSAC LGA + G+W H ++ +N I + +L L D+YAKCG +E+A+ VF +
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
EKNV TW+S + GLA++G GE+ +++F M+ G+ P+ VT ++VL CS G +++G+
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
F +MR ++ +EP ++HYGCLVDL RA L++A +I+ MPM+P+A +W SLL A
Sbjct: 362 RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRM 421
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
N+EL +A +++++LE N G YVL+SNIYA WD+ +R+ MK + + K P
Sbjct: 422 Y---KNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQP 478
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
GCSV+E+N VHEF VGD HP +I ++ + ++ LR Y A
Sbjct: 479 GCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKA 523
>gi|449461643|ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/492 (37%), Positives = 281/492 (57%), Gaps = 6/492 (1%)
Query: 16 NSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL 75
N N + H L LL C+ ++HAQI+ + N + T+L + + +L
Sbjct: 16 NVHNYSSKPKFLSTKHQLLSLLNHCSSTNHLFEIHAQILVSGLQNDSFFTTELLR-VAAL 74
Query: 76 VNSSQIAYA-HLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
S ++Y L+F+ + +T +N +IRGY+ + I L+ +M G+ P++ T+
Sbjct: 75 SPSRNLSYGCSLLFHCHFHSATMPWNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTF 134
Query: 135 PILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
P LLKAC L ++ K H++ +K + ++ LI FY + + A+ +FD+MT
Sbjct: 135 PFLLKACATLATLQEGKQFHAIAIKC-GLDLDVYVRNTLIYFYGSCKRMSGARKVFDEMT 193
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
E+ +V+W A+I V+ + E ID F KM + G E +E T+V +LSACA LG LG+W
Sbjct: 194 ERTLVSWNAVITACVENFCFDEAIDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGRW 253
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
VH V ++LN +LG A DMYAK G + A VF + +K+V TW+++I GLA HG
Sbjct: 254 VHSQVVGRGMVLNVQLGTAFVDMYAKSGDVGCARHVFNCLKQKSVWTWSAMILGLAQHGF 313
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
EA+++F M S I P+ VT I VL ACSHAGL++K F M R Y ++P + HYG
Sbjct: 314 ANEAIELFTNMMSSPIVPNHVTFIGVLCACSHAGLVDKSYHYFNLMERVYGIKPMMIHYG 373
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
+VD+L RA + EAYE+I +MP+EP+ ++W +LL+AC+ D E+AE A +RL++L
Sbjct: 374 SMVDVLGRAGQVKEAYELIMSMPVEPDPIVWRTLLSACSGRDVNGGAEVAEEARKRLLEL 433
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
EP GN V+++N +A W A RR MK+R I K G S IE+ + +F G
Sbjct: 434 EPKRGGNVVMVANKFAELGMWKQAADYRRTMKDRGIKKMAGESCIELGGSLRKFFSGFDS 493
Query: 492 HPCSEEIYSMLE 503
+ IY +L+
Sbjct: 494 RAAPDGIYDLLD 505
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 187/530 (35%), Positives = 305/530 (57%), Gaps = 47/530 (8%)
Query: 28 TKSHHHLPLL-----QKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
T H P L + L K++H ++K + L K+ SL +A
Sbjct: 131 TPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMY-SLCGLMDMA 189
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG 142
VF++ F++N +I GY I+L +M N + P S T ++L AC
Sbjct: 190 RG--VFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACS 247
Query: 143 DLRQ---VKGVHSLVVKSKD--------------------------FNSV----IHSLTR 169
++ K VH V + K F S+ + S T
Sbjct: 248 KVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTS 307
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
++ Y G++K A+ FDQM ++ ++WT MI+G+++ + E +++FR+M+ +G+ +
Sbjct: 308 IVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
E T+VSVL+ACA+LG+ E+G+W+ +++KN I + +G AL DMY KCG E+A +VF
Sbjct: 368 EFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ +++ TW +++ GLA +G G+EA+K+F+QMQ I+PDD+T + VL+AC+H+G++++
Sbjct: 428 DMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQ 487
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
++ F MR D+++EP++ HYGC+VD+L RA L+ EAYE++R MPM PN+++WG+LL A
Sbjct: 488 ARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGAS 547
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
+D +AE+A +++++LEP N Y L+ NIYA +W D ++RR + + I K
Sbjct: 548 RLHNDEP---MAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKK 604
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARMP 519
PG S+IE+N HEF+ GD H SEEIY LE +A +E +AA +P
Sbjct: 605 TPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELA---QESTFAAYLP 651
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 218/444 (49%), Gaps = 41/444 (9%)
Query: 8 NSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQ-IIKASFDNRTISDT 66
NS+L+ F S + + + +L C QFKQ+H+Q I + N T
Sbjct: 12 NSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKK 71
Query: 67 QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG 126
L ++YA+ +F +I P +N +I+G+++ G++LY M+ G
Sbjct: 72 LFVFWCSRL--GGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEG 129
Query: 127 LDPDSFTYPILLKAC----GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
+ PDS T+P LL G L K +H VVK S ++ L+ Y G +
Sbjct: 130 VTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKF-GLGSNLYVQNALVKMYSLCGLMDM 188
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A+ +FD+ +++V +W MI+G+ + K Y E I+L +M + V +TL+ VLSAC+
Sbjct: 189 ARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK 248
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
+ +L K VHE+V++ + +L AL + YA CG ++ A+R+F+ + ++V +W SI
Sbjct: 249 VKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSI 308
Query: 303 IGGLAIH-------------------------------GCGEEAVKMFWQMQMSGIKPDD 331
+ G GC E++++F +MQ +G+ PD+
Sbjct: 309 VKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDE 368
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
T+++VLTAC+H G +E G+ I + ++ K++ +V L+D+ + ++A +V
Sbjct: 369 FTMVSVLTACAHLGSLEIGEWIKTYIDKN-KIKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Query: 392 NMPMEPNAVLWGSLLTACASADDG 415
+M + + W +++ A+ G
Sbjct: 428 DMD-QRDKFTWTAMVVGLANNGQG 450
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 174/478 (36%), Positives = 282/478 (58%), Gaps = 43/478 (8%)
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIIN-PSTFAFNTVIRGYAEAGLGHRG-IQLYTQMIGN 125
L++ I + + +YA+ +F I + P + +N +I+ + + + I LY +
Sbjct: 13 LSRFIHACSSLGFYSYAYSLFTSITHAPDIYLYNNIIKALSSSPTHPKASIFLYNNIQLA 72
Query: 126 GLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDF--NSVIHSLTRLITFYCNFG----- 178
GL PDS+++P LKA ++ L +S F +S +H LT + Y +FG
Sbjct: 73 GLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFVQMYSSFGSGCIC 132
Query: 179 ------------------------------DVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
D+ +A+ LF++M ++NV++WTA+I G+ +
Sbjct: 133 DARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTALITGYAQA 192
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK-NCIILNDKL 267
+ I LFR+M+ VE +E+ ++ L+ACA LGA ELG+W+ ++++ + N L
Sbjct: 193 NRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYIDRLGLLTTNIPL 252
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
AL DMYAK G I+ AL+VF+ + K + TW ++I GLA+HG G EA++MF +M+ + +
Sbjct: 253 NNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALEMFSRMERARV 312
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
KP+D+T IA+L+ACSH GL++ G+ F M Y +EP ++HYGC++DLL RA L EA
Sbjct: 313 KPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAGHLKEAQ 372
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
++ MP EPNAV+WGSLL AC + D EL E+A++ L++LEP N GNY L+SNIYA
Sbjct: 373 TLLAQMPFEPNAVIWGSLLAACNTHGD---PELGELALQHLLELEPDNSGNYALLSNIYA 429
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
++ +W+++ +R++M + + K PG S+IE+N+ VHEF+ G+ H + I +L +
Sbjct: 430 SRGRWNESRVVRKVMWDAGVKKMPGGSLIEVNNRVHEFIAGEISHSQFDRIQEVLSKI 487
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 140/293 (47%), Gaps = 16/293 (5%)
Query: 58 FDNRTISDTQLA---KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHR 114
FD ++S +A ++ + A +F ++ + ++ +I GYA+A H
Sbjct: 138 FDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTALITGYAQANRPHD 197
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLI 171
I L+ +M ++PD + L AC G L + + + + + I LI
Sbjct: 198 AIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYIDRLGLLTTNIPLNNALI 257
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
Y GD+KSA +F+ M K ++TWT MI G E +++F +M + V+ N++
Sbjct: 258 DMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALEMFSRMERARVKPNDI 317
Query: 232 TLVSVLSACANLGASELGKW-VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-K 289
T +++LSAC+++G + G+W + +++ I + + D+ + G+++EA + +
Sbjct: 318 TFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAGHLKEAQTLLAQ 377
Query: 290 IVLEKNVCTWNSIIGGLAIHG---CGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
+ E N W S++ HG GE A++ +++ PD+ A+L+
Sbjct: 378 MPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELE-----PDNSGNYALLS 425
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 296/471 (62%), Gaps = 14/471 (2%)
Query: 46 FKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
+Q+HA+I+ ++S ++K++ +L YA +F+QI NP FA+N+VI
Sbjct: 4 LRQIHARILTHVPPISSVS-FLISKILSFAALSPFGNFDYARKIFSQIPNPGIFAYNSVI 62
Query: 104 RGYAEAGLGHR-GIQLYTQMIGNGL-DPDSFTYPILLKACG---DLRQVKGVHSLVVKSK 158
RG + + I L+ M+G G +P++FT +LKAC L + K +H+ +++S
Sbjct: 63 RGCLYTKIPSKEPIHLFKDMVGKGYPNPNTFTMAFVLKACSIIMALEEGKQIHAQILRS- 121
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
F+S + + L+ FY ++ A+ +FD++TE+N+V W+AM++G+ + E + +F
Sbjct: 122 GFSSSPYVQSSLVNFYSKCEEITIARKVFDEITERNLVCWSAMVSGYARLGMINEALIMF 181
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
R+M+ G+E +E++LV VLSACA +GA ++GKWVH ++ K I ++ +L AL +MYAKC
Sbjct: 182 REMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKRMIHVDLELNTALINMYAKC 241
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G IE+A +F + K+ W+S+I GLAIHG E+A+ +F +M+ + KP+ VT I +L
Sbjct: 242 GCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGIL 301
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
+AC+H GL+ GK + +M + +EP+++HYGC+VDLLCR L+DEAY+ +P P+
Sbjct: 302 SACAHGGLVSDGKRYWSSM-LELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPD 359
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
V+W +LL A ++ AE+ +L++LEP+ NY++++N+YA+ +Q + +
Sbjct: 360 PVIWRTLLVAYTK---NRMLQKAEMVAGKLLELEPWKAENYIILANLYASVSQLEKVSHV 416
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
R++MKE I PGC+ IE++ VH F+ GD HP +EEI L VA+ +
Sbjct: 417 RKMMKENGIKALPGCTSIEVDGFVHNFVTGDWSHPEAEEIKKTLRDVALKI 467
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 144/306 (47%), Gaps = 16/306 (5%)
Query: 6 VPNSQLTHFTNS--ANSHKNSNTATKSHHHLPLLQKCTHLVQF---KQVHAQIIKASFDN 60
+P+ + H + N NT T + +L+ C+ ++ KQ+HAQI+++ F +
Sbjct: 70 IPSKEPIHLFKDMVGKGYPNPNTFTMAF----VLKACSIIMALEEGKQIHAQILRSGFSS 125
Query: 61 RTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYT 120
+ L +I A VF++I + ++ ++ GYA G+ + + ++
Sbjct: 126 SPYVQSSLVNFYS---KCEEITIARKVFDEITERNLVCWSAMVSGYARLGMINEALIMFR 182
Query: 121 QMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNF 177
+M G++PD + +L AC G L K VH+ +K + + + T LI Y
Sbjct: 183 EMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAY-IKKRMIHVDLELNTALINMYAKC 241
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
G ++ A+ +FD+M K+ W++MI G + +++F +M ++ + N +T + +L
Sbjct: 242 GCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGIL 301
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
SACA+ G GK + + I + + + D+ + G I+EA I+ +
Sbjct: 302 SACAHGGLVSDGKRYWSSMLELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPTPDPV 361
Query: 298 TWNSII 303
W +++
Sbjct: 362 IWRTLL 367
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 290/505 (57%), Gaps = 45/505 (8%)
Query: 34 LPLLQKCTHLVQFKQVHAQ-IIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
L LLQ + Q KQ+H Q I+ F + +T LI+ + + + AH VF ++
Sbjct: 70 LYLLQAVNFISQVKQIHCQAIVTGLFSFGYLQNT----LIKVYLENGLVRLAHQVFEKMP 125
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
+P +FN +I GYA+ G G ++L+ +M+G GL+PD FT LL +CG L V K
Sbjct: 126 SPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKA 185
Query: 150 VHSLVVKSK----------------------------DFNSV----IHSLTRLITFYCNF 177
VH + + K F ++ I S ++
Sbjct: 186 VHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKV 245
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
G+++ A+L F QM +++V+W +++ G+ + ++ +L M V + +T++S++
Sbjct: 246 GELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLV 305
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
SA GA + G+W H +V + I L+ LG+AL DMY KCG IE A RVFK + +K+V
Sbjct: 306 SAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEINKKDVT 365
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
W ++I GLA HG G +A+++F +MQ + PDDVT ++VL+ACSH+GL+++G ++F +M
Sbjct: 366 VWTTMITGLAFHGYGSKALELFSEMQ-EDVSPDDVTFVSVLSACSHSGLVDQGIKVFSSM 424
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
DY +EP V+HYGCLVDLL R+ L EA ++I MPM+P+ +WG++L AC + D
Sbjct: 425 -TDYGIEPGVEHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSIWGAMLNACQAQGD--- 480
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
VELAEIA L+ L+P +G Y L+SNIYAA +W + K+R M+ R + K GCS +
Sbjct: 481 VELAEIASRELLNLDPEEEGGYTLLSNIYAASGRWSYSKKIRETMESRGVKKTAGCSSVV 540
Query: 478 INDVVHEFMVGDGRHPCSEEIYSML 502
++ VVH F+ D HP +I S+L
Sbjct: 541 VDGVVHNFISADKCHPGWVDISSIL 565
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 175/359 (48%), Gaps = 40/359 (11%)
Query: 87 VFNQII-NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR 145
+FN NP+ F +NT+I ++ LY ++ +G PD T LL+A +
Sbjct: 22 LFNHFTPNPNLFIYNTLISAFSSLK-KIESFYLYNVLLSSGECPDKQTLLYLLQAVNFIS 80
Query: 146 QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
QVK +H + + F S + LI Y G V+ A +F++M ++V++ MI G+
Sbjct: 81 QVKQIHCQAIVTGLF-SFGYLQNTLIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVGY 139
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN--KNCIIL 263
K+ E + LF +M G+E +E T++ +L +C LG + GK VH ++ K I
Sbjct: 140 AKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISS 199
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
N LG AL DMY KC +E ALR F + EK++ +WN I+ G A G E+A F+QM
Sbjct: 200 NLILGNALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMP 259
Query: 324 -------------------------------MSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
M + PD VT+I++++A + +G +++G+
Sbjct: 260 CRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLVSAATESGALDQGRW 319
Query: 353 IF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ +R K++ + L+D+ C+ ++ A V + + + + +W +++T A
Sbjct: 320 AHGWVIRMQIKLDAFLG--SALIDMYCKCGSIERASRVFKEIN-KKDVTVWTTMITGLA 375
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 186/529 (35%), Positives = 289/529 (54%), Gaps = 51/529 (9%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
H LLQ C + + KQ+H QII F + L KL+ + S + AH VF +
Sbjct: 19 QHFFSLLQTCDTIKKLKQIHTQIIVNGFSQKNF---LLVKLLSFYITSGNLLNAHKVFER 75
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQV 147
I NPST +N +IRG++++ H+ ++LY +M+ +P+ FTY L+ C LR+
Sbjct: 76 IENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREG 135
Query: 148 KGVHSLVVKS-----------------------------KDFNSVIH----SLTRLITFY 174
+ VH VV + + F+ ++ S L+ Y
Sbjct: 136 EQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGY 195
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
GDV A+ +FD+M E+NVV+WT MI G + ++ + LF +MR +GV+++++ LV
Sbjct: 196 VRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALV 255
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTD----MYAKCGYIEEALRVFKI 290
+ LSACA LG +LG W+H ++++ N L +L + MYA CG I++A +VF
Sbjct: 256 AALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIG 315
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI---KPDDVTLIAVLTACSHAGLI 347
+ +++ +W S+I G A G EEA+ +F MQ G +PD +T I VL ACSHAG +
Sbjct: 316 MQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFV 375
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
++G+ F M + + + P ++HYGC+VDLL RA LDEA+ +I +MPM+PN +WG+LL
Sbjct: 376 DQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLG 435
Query: 408 ACASADDGANVELAEIAMERL-IKLEPFNDGNY-VLMSNIYAAKAQWDDAGKMRRLMKER 465
C N ELA ++L ++L+P Y VL+SN+YA +W D +R+ M E
Sbjct: 436 GCRIHK---NAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEI 492
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ K G S ++IN VVH+F+ GD H + +Y ML + + E Y
Sbjct: 493 GVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKITRQAKLEGY 541
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 178/466 (38%), Positives = 273/466 (58%), Gaps = 51/466 (10%)
Query: 96 TFAFNTVIRGYAEA-----GLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQV 147
+F +NT+IR + +A G H I ++ +M +G+ PD T+P LL++ L
Sbjct: 24 SFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLG 83
Query: 148 KGVHSLVVKSKDFNSVIHSL--TRLITFYCNFGDVKSAQLLFDQ---------------- 189
+ VH+ +++ F I T LI+ Y + G++ A+ +FD+
Sbjct: 84 RSVHAQILR---FGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINAN 140
Query: 190 ---------------MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV---EVNEL 231
M E+NV++W+ MING+V+ Y+E + LFR+M+ GV NE
Sbjct: 141 FQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEF 200
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-I 290
T+ VL+AC LGA E GKW H +++K + ++ LG AL DMYAKCG +E+A VF +
Sbjct: 201 TMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNL 260
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
K+V W+++I GLA+HG EE V +F +M G++P+ VT +AV AC H GL+ +G
Sbjct: 261 GPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEG 320
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
K+ M DY + P ++HYGC+VDL RA + EA+ V+++MPMEP+ ++WG+LL+
Sbjct: 321 KDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSR 380
Query: 411 SADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN 470
D +E E+A+++LI+LEP N G YVL+SN+YA + +W+D +R LM+ I K
Sbjct: 381 MHGD---IETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKV 437
Query: 471 PGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
PGCS+IE+ V+HEF VGD HP + +I+ MLE + L+ E Y
Sbjct: 438 PGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVG 483
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 182/519 (35%), Positives = 295/519 (56%), Gaps = 49/519 (9%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
L+ C + H ++ + TQ+ + + A+A VF + P+
Sbjct: 17 LRACATFRDLLRAHGLAVRLCLSQSSYVATQIVHVCN---GHGRAAHAARVFAHVPAPNL 73
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP---------DSFTYPILLKACGDLRQV 147
N +I+ YA+ L +++Y +M+ DP D FTYP LLKACG L
Sbjct: 74 HLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACGGLAAS 133
Query: 148 ---KGVHSLVVKSK------DFNSVIHSLTR------------------------LITFY 174
+ VH+ V +S NS+I TR LI+ +
Sbjct: 134 QLGRQVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKVFDGMREKDAVSWNTLISAH 193
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
G ++ A+ LF M +K VV+WTA+++G+ ++ +++FR+M+ G E +++++V
Sbjct: 194 ARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFEPDDVSIV 253
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
+VL ACA LGA ELG+W++ + NK+ ++ + AL +MYAKCG IEEAL++F + EK
Sbjct: 254 AVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIEEALQLFHGMSEK 313
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEI 353
+V +W++ IGGLA HG EAVK+F M G + P+ +T + +L+ACSHAGL+++G
Sbjct: 314 DVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSHAGLLDEGLRY 373
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F M+ +Y VEP+V+HYGC+VDLL R+ + A + I MP+ P+ +WGSLL+AC S
Sbjct: 374 FDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGSLLSACRSHS 433
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
D V+ A +A ERL++LEP + GN V+++N+YAA +W + R+ ++ R+ K PGC
Sbjct: 434 D---VDTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWGNVASTRKEIRSRSTRKTPGC 490
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
S+IE+++VV EF+ G+ P I ++++ +A L ++
Sbjct: 491 SMIEVDNVVREFVAGEDLGPELGGIAAIIDILASQLADD 529
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 182/503 (36%), Positives = 284/503 (56%), Gaps = 41/503 (8%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K++H ++K D L + + + YA LVF++++ +++T+IR
Sbjct: 144 KEIHGFVLKKGLDRDVFVGNALMLMYGE---CACVEYARLVFDKMMERDVVSWSTMIRSL 200
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSV 163
+ ++L +M + P ++ D +R K +H+ V+++ + +
Sbjct: 201 SRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHM 260
Query: 164 -IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG-------- 214
+ + T L+ Y G + A+ LF+ +T+K VV+WTAMI G ++ E
Sbjct: 261 GVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQ 320
Query: 215 -----------------------IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+LF +MR SGV ++T+VS+LS CA GA +LGKW
Sbjct: 321 NRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKW 380
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
VH +++K + ++ L AL DMYAKCG I A R+F + +++C WN+II G A+HG
Sbjct: 381 VHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGY 440
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
GEEA+ +F +M+ G+KP+D+T I +L ACSHAGL+ +GK++F M + + P ++HYG
Sbjct: 441 GEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYG 500
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VDLL RA LLDEA+E+I++MP++PN ++WG+L+ AC N +L E+A +L+++
Sbjct: 501 CMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHK---NPQLGELAATQLLEI 557
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
EP N G VLMSNIYAA +W DA +R+ MK + K PG SVIE+N VHEF++GD
Sbjct: 558 EPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQS 617
Query: 492 HPCSEEIYSMLEYVAISLREECY 514
HP I ML + L E Y
Sbjct: 618 HPQIRRINEMLAEMRRKLNEAGY 640
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 208/451 (46%), Gaps = 71/451 (15%)
Query: 4 QLVPN------SQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKAS 57
QL P+ QL H +S + K + T ++ P + L Q KQ+HA IIK
Sbjct: 13 QLTPSLLPLTIQQLQHHPHS--TLKFNPTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTH 70
Query: 58 FDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQ 117
F + + QI F ++PS +N VI Y + +
Sbjct: 71 FHH-----------------ALQIPLND--FPSGLSPSA-QWNFVITSYTKRNQPRNALN 110
Query: 118 LYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFY 174
+Y Q+ + D+F P +LKACG + K +H V+K K + + L+ Y
Sbjct: 111 VYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLK-KGLDRDVFVGNALMLMY 169
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
V+ A+L+FD+M E++VV+W+ MI + K + ++L R+M V +E+ +V
Sbjct: 170 GECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMV 229
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLG----AALTDMYAKCGYIEEALRVFKI 290
S+++ A+ +GK +H +V +N N+ +G AL DMYAKCG++ A ++F
Sbjct: 230 SMVNLFADTANMRMGKAMHAYVIRNSN--NEHMGVPTTTALLDMYAKCGHLGLARQLFNG 287
Query: 291 VLEKNVCTWNSIIGG-------------------------------LAIHGCGEEAVKMF 319
+ +K V +W ++I G A C ++A +F
Sbjct: 288 LTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLF 347
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
QM+ SG++P VT++++L+ C+ AG ++ GK + + ++ +VE + LVD+ +
Sbjct: 348 DQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE-RVEVDCILNTALVDMYAK 406
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
++ A + + + +W +++T A
Sbjct: 407 CGDINAAGRLFIE-AISRDICMWNAIITGFA 436
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 189/506 (37%), Positives = 298/506 (58%), Gaps = 45/506 (8%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA---YAHLVFNQIINPSTFAFNT 101
Q KQ+ AQ+IK + I++ +LA +L S + YA VFN I +P+TF +N
Sbjct: 3 QLKQIQAQMIKTAI----ITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNA 58
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVVK-- 156
+IR Y+ + Y QM+ + + +S+T+P LL+AC +L + VH LV+K
Sbjct: 59 IIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLG 118
Query: 157 --SKDF--NSVIH------------------------SLTRLITFYCNFGDVKSAQLLFD 188
S F N+++H S +I Y GDVK+A +F
Sbjct: 119 FGSDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFL 178
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
M KNVV+WT++I+G V+ E + L +M+++G E++ + + S+L+ACANLGA +
Sbjct: 179 DMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQ 238
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL--EKNVCTWNSIIGGL 306
G+W+H +V N + ++ +G AL +MY KCG +EEAL VF + +K+V W ++I G
Sbjct: 239 GRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGF 298
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
AIHG G EA++ F +M+ GI+P+ +T AVL ACS+ GL+E+GKE+F +M+ Y V P+
Sbjct: 299 AIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPS 358
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
++HYGC+VDLL R+ LDEA E+I+ MPM+P+AV+WG+LL AC D L
Sbjct: 359 IEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRD---FLLGSQVGA 415
Query: 427 RLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFM 486
L++++ + G Y+ ++ I AA+ +W +A ++R MK + +PG S + +N +VHEF+
Sbjct: 416 HLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNGIVHEFL 475
Query: 487 VGDGRHPCSEEIYSMLEYVAISLREE 512
G HP E+I L+ +A LR++
Sbjct: 476 AGHQDHPQMEQIQLKLKQIAERLRQD 501
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 187/501 (37%), Positives = 283/501 (56%), Gaps = 42/501 (8%)
Query: 49 VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE 108
VH IK SF + L L+ ++ A +F I ++N++I +A+
Sbjct: 148 VHGMAIKLSFG---MDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQ 204
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIH 165
++L+ +M + P+S T +L AC DL + V S ++ K +
Sbjct: 205 GNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCS-YIERKGIKVDLT 263
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY-------------- 211
++ Y G V AQ LFD+M E++V +WT M++G+ K +Y
Sbjct: 264 LCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKE 323
Query: 212 -----------------REGIDLFRKMRDSGV-EVNELTLVSVLSACANLGASELGKWVH 253
+E + +F +++ S + + +E+TLVS LSACA LGA +LG W+H
Sbjct: 324 IAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIH 383
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
++ + I+LN L ++L DMYAKCG +E+AL VF V E++V W+++I GL +HG G+
Sbjct: 384 VYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGK 443
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
A+ +F++MQ + +KP+ VT VL ACSHAGL+++G+ F+ M Y V P +KHY C+
Sbjct: 444 AAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACM 503
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
VD+L RA L+EA E+I M P+A +WG+LL AC+ NVEL E+A ++L+KLEP
Sbjct: 504 VDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLH---MNVELGELASDQLLKLEP 560
Query: 434 FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHP 493
N G VL+SNIYA +W+ ++R+LM++ + K PGCS IE N VHEF+VGD HP
Sbjct: 561 RNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHP 620
Query: 494 CSEEIYSMLEYVAISLREECY 514
S IYS LE +A L+ Y
Sbjct: 621 LSSNIYSKLEEIATKLKSVGY 641
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 225/441 (51%), Gaps = 49/441 (11%)
Query: 6 VPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKAS--FDNRTI 63
VP+ L +F S N+N ++H L + KC+ Q K+VHA++++ FD +
Sbjct: 6 VPSISLQNF-----STLNNNLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSA 60
Query: 64 SDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI 123
S A + S S + YA +F+QI P+ + +NT+IR YA + + ++ ++
Sbjct: 61 SKLFTASALSSF---STLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLL 117
Query: 124 GNGLD-PDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
D P+ FT+P ++KA +L+ + VH + +K F ++ L L+ FY GD
Sbjct: 118 DKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIK-LSFGMDLYILNSLVRFYGACGD 176
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
+ A+ LF ++ K+VV+W +MI+ + + ++LF KM V N +T+V VLSA
Sbjct: 177 LSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSA 236
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
CA E G+WV ++ + I ++ L A+ DMY KCG +++A ++F + E++V +W
Sbjct: 237 CAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSW 296
Query: 300 NSIIGGLAI-------------------------------HGCGEEAVKMFWQMQMSGI- 327
++ G A +G +EA+ +F ++Q+S I
Sbjct: 297 TIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIA 356
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
KPD+VTL++ L+AC+ G I+ G I ++R+ + N LVD+ + L++A
Sbjct: 357 KPDEVTLVSTLSACAQLGAIDLGGWIHVYIKRE-GIVLNCHLISSLVDMYAKCGSLEKAL 415
Query: 388 EVIRNMPMEPNAVLWGSLLTA 408
EV ++ E + +W +++
Sbjct: 416 EVFYSVE-ERDVYVWSAMIAG 435
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 141/278 (50%), Gaps = 8/278 (2%)
Query: 141 CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF--YCNFGDVKSAQLLFDQMTEKNVVTW 198
C +Q+K VH+ ++++ F S ++L T +F + A+ LFDQ+ + N+ TW
Sbjct: 35 CSSSKQLKEVHARMLRTGLFFDPF-SASKLFTASALSSFSTLDYARNLFDQIPQPNLYTW 93
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEV-NELTLVSVLSACANLGASELGKWVHEFVN 257
+I + + + +F + D ++ N+ T V+ A + L AS +G VH
Sbjct: 94 NTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAI 153
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
K ++ + +L Y CG + A R+FK + K+V +WNS+I A C E+A++
Sbjct: 154 KLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALE 213
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYGCLVDL 376
+F +M+ + P+ VT++ VL+AC+ +E G+ + Y R+ KV+ + + ++D+
Sbjct: 214 LFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCN--AMLDM 271
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
+ +D+A ++ MP E + W +L A D
Sbjct: 272 YTKCGSVDDAQKLFDEMP-ERDVFSWTIMLDGYAKMGD 308
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 167/379 (44%), Positives = 253/379 (66%), Gaps = 8/379 (2%)
Query: 137 LLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVV 196
+ +CG++ +GV +K++D + S T ++T + N + A+ FDQM E++ V
Sbjct: 284 MFASCGEMDAARGVFD-EMKTRD----VISWTSIVTGFANTCRIDLARKYFDQMPERDYV 338
Query: 197 TWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV 256
+WTAMI+G+++ ++E + LFR M+ S V+ +E T+VS+L+ACA+LGA ELG+W ++
Sbjct: 339 SWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYI 398
Query: 257 NKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAV 316
+KN I + +G AL DMY KCG +E+A ++F + +K+ TW ++I GLA +G GEEA+
Sbjct: 399 DKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEAL 458
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDL 376
MF M + + PD++T I V+ AC+H GL+ KGK F NM + ++PN+ HYGC+VDL
Sbjct: 459 TMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDL 518
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFND 436
L RA L EA EVI NMP++PN+++WGSLL AC NV+LAE+A +++LEP N
Sbjct: 519 LGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVH---KNVQLAEMAANEILELEPENG 575
Query: 437 GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSE 496
YVL+ NIYAA +W + +R++M ER I K PGCS++E+N +V+EF+ GD HP S+
Sbjct: 576 AVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSK 635
Query: 497 EIYSMLEYVAISLREECYA 515
EIY+ LE + L Y+
Sbjct: 636 EIYAKLENMKQDLSNAGYS 654
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 213/448 (47%), Gaps = 46/448 (10%)
Query: 7 PNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDT 66
PN L+ F S+ ++ KS + LL+ C + + Q+H+Q IK + + T
Sbjct: 14 PNLSLSLFLKRMISNTPLHSFVKSP--ISLLETCNTMYEINQIHSQTIKTGLSSNHLFLT 71
Query: 67 QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG 126
++ + S + YA VF++I PS F +NT+I+GY+ G+ LY M+ +
Sbjct: 72 KVI-IFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHN 130
Query: 127 LDPDSFTYPILLKA-CGDLRQVKGV----HSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
+ PD FT+P LLK D+ G H+++ D N + I + G V
Sbjct: 131 IKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQK--GFIHLFSLCGLVN 188
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD--SGVEVNELTLVSVLSA 239
A+ +FD VVTW +++G+ + K Y E LF +M V N +TLV +LSA
Sbjct: 189 YARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSA 248
Query: 240 CANLGASELGKWVH-EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
C+ L GK ++ +++ + + N L AL DM+A CG ++ A VF + ++V +
Sbjct: 249 CSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVIS 308
Query: 299 WNSIIGGLA--------------------------IHGC-----GEEAVKMFWQMQMSGI 327
W SI+ G A I G +E + +F MQMS +
Sbjct: 309 WTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNV 368
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
KPD+ T++++LTAC+H G +E G+ + ++ K++ + L+D+ + +++A
Sbjct: 369 KPDEFTMVSILTACAHLGALELGEWAKTYIDKN-KIKNDTFIGNALIDMYFKCGNVEKAK 427
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDG 415
++ M + + W +++ A+ G
Sbjct: 428 KIFNEM-QKKDKFTWTAMIVGLANNGHG 454
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 11/263 (4%)
Query: 55 KASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
+ FD D ++ N+ +I A F+Q+ ++ +I GY
Sbjct: 295 RGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFK 354
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRL 170
+ L+ M + + PD FT +L AC G L + + + K+K N L
Sbjct: 355 EVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIG-NAL 413
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNE 230
I Y G+V+ A+ +F++M +K+ TWTAMI G + E + +F M ++ V +E
Sbjct: 414 IDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDE 473
Query: 231 LTLVSVLSACANLGASELGKWVHEFVN---KNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+T + V+ AC ++G GK H F N ++ I N + D+ + G+++EAL V
Sbjct: 474 ITYIGVMCACTHVGLVAKGK--HFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEV 531
Query: 288 -FKIVLEKNVCTWNSIIGGLAIH 309
+ ++ N W S++G +H
Sbjct: 532 IMNMPVKPNSIVWGSLLGACRVH 554
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 22/200 (11%)
Query: 24 SNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFD-NRTISDTQLAK-LIESLVNSSQI 81
SN + +L C HL + + K D N+ +DT + LI+ +
Sbjct: 366 SNVKPDEFTMVSILTACAHLGALEL--GEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNV 423
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
A +FN++ F + +I G A G G + +++ M+ + PD TY ++ AC
Sbjct: 424 EKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCAC 483
Query: 142 GDLRQVKGVHSLVVKSKDFNS---VIHSLTRLITFYCNFGDV--------KSAQLLFDQM 190
+ LV K K F S V H + +T Y D+ ++ +++ +
Sbjct: 484 THV-------GLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMP 536
Query: 191 TEKNVVTWTAMINGHVKQKN 210
+ N + W +++ KN
Sbjct: 537 VKPNSIVWGSLLGACRVHKN 556
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 184/499 (36%), Positives = 281/499 (56%), Gaps = 17/499 (3%)
Query: 20 SHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIK-ASFDNRTISDTQLAKLIESLVNS 78
SH A KS LP L +Q+HA+ +K S N + L L+
Sbjct: 116 SHLTFPIALKSASRLP-----HPLRAGEQLHARSLKLPSHTNPHV----LTSLLTLYARC 166
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
+ A VF+++ +PST ++ +I Y +AG + + NG+ PDSFT +L
Sbjct: 167 GLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVL 226
Query: 139 KACGDLRQVKGVHSLVVKSKDFNSVIHSL---TRLITFYCNFGDVKSAQLLFDQMTEKNV 195
AC + + V ++ + + S+ T + Y G++ A+ +FD+M +K+
Sbjct: 227 TACARVADL-ATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDA 285
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V W AM+ G+ + RE +DLF M+ GV + + LSAC LGA +LG+
Sbjct: 286 VAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRM 345
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
V+ + + N LG AL DMYAKCG EA VF+ + +K++ WN++I GL + G + A
Sbjct: 346 VDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTA 405
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
+ QM+ SG+K +D T I +L +C+H GLI+ G+ F+NM + Y + P ++HYGC+VD
Sbjct: 406 FTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVD 465
Query: 376 LLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN 435
LL RA LL EA+++I +MPM NAV+ G+LL C N ELAE + +LI+LEP+N
Sbjct: 466 LLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHR---NAELAEHVLTQLIRLEPWN 522
Query: 436 DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
GNYV++SNIY+ + +W+DA K+R MKE+ + K P CS +E VHEF VGD HP S
Sbjct: 523 SGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLS 582
Query: 496 EEIYSMLEYVAISLREECY 514
++IY L+ + + ++ Y
Sbjct: 583 DQIYKKLDELGLEMKTMGY 601
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 186/479 (38%), Positives = 278/479 (58%), Gaps = 25/479 (5%)
Query: 34 LP-LLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
LP LL+ C+ ++ Q+HA IK + L + S I VF+
Sbjct: 141 LPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAV---SGFIEAVEKVFD 197
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQ 146
Q + ++ T+I+ Y++ G I + +M D T ++L AC GD
Sbjct: 198 QGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRM---NCTADRMTLVVVLSACSQLGDFTL 254
Query: 147 VKGV-----HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
K + H L D +S + L+ Y G A+ LF M KN+V+W +M
Sbjct: 255 GKKILAYMDHHLF----DVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSM 310
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
I+G Q ++E + +FR+M+ G++ + +TLV VL++CANLG ELGKWVH +++KN +
Sbjct: 311 ISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHM 370
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
+ + AL DMYAKCG I++A VF+ + K+V ++ ++I G A+HG + A+ +F +
Sbjct: 371 KADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSE 430
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
M G++PD VTL+ VL+ACSHAGL+E+G+ F +M R Y ++P +HYGC+VDLL RA
Sbjct: 431 MPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAG 490
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVL 441
L+ EA MP+ P+A +WGSLL AC A VEL E +++LI++EP DG Y+L
Sbjct: 491 LISEAEAFTNKMPIVPDASVWGSLLGAC---KIHAKVELGETVIQKLIEMEPERDGAYIL 547
Query: 442 MSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYS 500
MSNIY++ +W DA K R+ MK+ NI K PGCS IE++ +VHEF G+ HP S E+ S
Sbjct: 548 MSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDGMVHEFRKGEKSHPKSREMIS 606
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 205/397 (51%), Gaps = 46/397 (11%)
Query: 27 ATKSHHHLP---LLQKCTHLVQFKQVHAQIIKASFDNRTIS----------------DTQ 67
++ + H P LL C + + KQ+HA IIKA+ T + D
Sbjct: 20 SSANFHEFPQLLLLSSCKSVREIKQIHASIIKANTTRSTTTLPIISLCTKITSLLQQDVH 79
Query: 68 LAKLIESLVNSSQIA-YAH----LVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
LA I++L +S +A + H +FN II + + NT ++ LY QM
Sbjct: 80 LADSIQNLWYASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFS----------LYRQM 129
Query: 123 IGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
+ GL PD++T P LLKAC + +H+ +K+ +S + L+ FY G
Sbjct: 130 LLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKT-GLSSNLFVKNTLMRFYAVSGF 188
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
+++ + +FDQ ++++WT +I + K E I F +M + +TLV VLSA
Sbjct: 189 IEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRM---NCTADRMTLVVVLSA 245
Query: 240 CANLGASELGKWVHEFVNKNCIILNDK--LGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
C+ LG LGK + +++ + ++ LG AL DMY KCG A ++F ++ KN+
Sbjct: 246 CSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLV 305
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
+WNS+I GLA G +EA+ MF +MQ G+KPD VTL+ VL +C++ G +E GK + +
Sbjct: 306 SWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYI 365
Query: 358 RRDY-KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
+++ K + V + LVD+ + +D+A+ V + M
Sbjct: 366 DKNHMKADGYVAN--ALVDMYAKCGSIDQAFMVFQAM 400
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 131/301 (43%), Gaps = 18/301 (5%)
Query: 124 GNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSV----IHSLTRLITFYC---- 175
G+ + F +LL +C +R++K +H+ ++K+ S I SL IT
Sbjct: 19 GSSANFHEFPQLLLLSSCKSVREIKQIHASIIKANTTRSTTTLPIISLCTKITSLLQQDV 78
Query: 176 ----NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN-YREGIDLFRKMRDSGVEVNE 230
+ ++ A L + + V + A+I N + L+R+M G+ +
Sbjct: 79 HLADSIQNLWYASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDT 138
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI 290
TL +L AC+ A +H K + N + L YA G+IE +VF
Sbjct: 139 YTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQ 198
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
++ +W ++I + G EA+ F++M + D +TL+ VL+ACS G G
Sbjct: 199 GPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCTA---DRMTLVVVLSACSQLGDFTLG 255
Query: 351 KEIFYNMRRD-YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
K+I M + V +V L+D+ + A ++ MP++ N V W S+++
Sbjct: 256 KKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVK-NLVSWNSMISGL 314
Query: 410 A 410
A
Sbjct: 315 A 315
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 184/499 (36%), Positives = 281/499 (56%), Gaps = 17/499 (3%)
Query: 20 SHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIK-ASFDNRTISDTQLAKLIESLVNS 78
SH A KS LP L +Q+HA+ +K S N + L L+
Sbjct: 69 SHLTFPIALKSASRLP-----HPLRAGEQLHARSLKLPSHTNPHV----LTSLLTLYARC 119
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
+ A VF+++ +PST ++ +I Y +AG + + NG+ PDSFT +L
Sbjct: 120 GLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVL 179
Query: 139 KACGDLRQVKGVHSLVVKSKDFNSVIHSL---TRLITFYCNFGDVKSAQLLFDQMTEKNV 195
AC + + V ++ + + S+ T + Y G++ A+ +FD+M +K+
Sbjct: 180 TACARVADL-ATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDA 238
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V W AM+ G+ + RE +DLF M+ GV + + LSAC LGA +LG+
Sbjct: 239 VAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRM 298
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
V+ + + N LG AL DMYAKCG EA VF+ + +K++ WN++I GL + G + A
Sbjct: 299 VDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTA 358
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
+ QM+ SG+K +D T I +L +C+H GLI+ G+ F+NM + Y + P ++HYGC+VD
Sbjct: 359 FTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVD 418
Query: 376 LLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN 435
LL RA LL EA+++I +MPM NAV+ G+LL C N ELAE + +LI+LEP+N
Sbjct: 419 LLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHR---NAELAEHVLTQLIRLEPWN 475
Query: 436 DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
GNYV++SNIY+ + +W+DA K+R MKE+ + K P CS +E VHEF VGD HP S
Sbjct: 476 SGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLS 535
Query: 496 EEIYSMLEYVAISLREECY 514
++IY L+ + + ++ Y
Sbjct: 536 DQIYKKLDELGLEMKTMGY 554
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 189/527 (35%), Positives = 298/527 (56%), Gaps = 54/527 (10%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+ L+ C + Q KQ HAQ+I + + +S +L KL + ++YAH +F+QI
Sbjct: 20 VSLIDSCKSMQQIKQTHAQLITTALISHPVSANKLLKL----AACASLSYAHKLFDQIPQ 75
Query: 94 PSTFAFNTVIRGYAEAGLG-HRGIQLYTQMIGN-GLDPDSFTYPILLKACGD-------- 143
P F +NT+I+ ++ + H + ++ + + GL P+ +++ ACG+
Sbjct: 76 PDLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGE 135
Query: 144 --------------------LRQVKGVHSLVVKSKDF-----NSVIHSLTRLITFYCNFG 178
L + G LV +S+ + ++S LI Y G
Sbjct: 136 QVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSG 195
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
++ A+ LFD M E++VV+W+ +I G+V+ + E +D F KM G + NE TLVS L+
Sbjct: 196 NMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALA 255
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVC 297
AC+NL A + GKW+H ++ K I +N++L A++ DMYAKCG IE A RVF + +++ V
Sbjct: 256 ACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVW 315
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
WN++IGG A+HG EA+ +F QM++ I P+ VT IA+L ACSH ++E+GK F M
Sbjct: 316 LWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLM 375
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
DY + P ++HYGC+VDLL R+ LL EA ++I +MPM P+ +WG+LL AC D
Sbjct: 376 VSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYKDMER 435
Query: 418 VELAEIAMERLIK-LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIV-----KNP 471
+ R+IK ++P + G +VL+SNIY+ +W++A R+++E+N + K P
Sbjct: 436 ----GYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEA----RILREKNEISRDRKKIP 487
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
GCS IE+ H+F+VGD HP S EIYS L+ + L+ Y +
Sbjct: 488 GCSSIELKGTFHQFLVGDQSHPQSREIYSFLDEMTTKLKSAGYVPEL 534
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 190/516 (36%), Positives = 296/516 (57%), Gaps = 43/516 (8%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSS--- 79
S S L LL +C + KQ+ + + + T+ D A I S S
Sbjct: 6 GSKYLKSSRRVLSLLDQCVTMAHIKQIQSHLTVSG----TLFDPFAAGRIISFCAVSAQG 61
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK 139
I++A+L+F + ++F +NT++R + + + LY M+ G P+++T+ LL+
Sbjct: 62 DISHAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQ 121
Query: 140 ACGDLRQVK-GV--HSLVVK----SKDF--NSVIH------------------------S 166
AC L + G+ H+ V+ + DF N ++H +
Sbjct: 122 ACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVT 181
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
T +I Y G V A+ LFD+M EKN V+W+AMI G+ + +RE ++LF M+ +G
Sbjct: 182 WTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGF 241
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
N +V L+ACA LGA + G+W+H +V++N ++L+ LG AL DMYAKCG +E A R
Sbjct: 242 RPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACR 301
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF +L+++V + S+I GLA HG A++MF +MQ G+ P++VT I +L+ACS GL
Sbjct: 302 VFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGL 361
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+E+G IF +M Y +EP V+HYGCLVDLL RA +L++A V+R MP+EP++ + G+LL
Sbjct: 362 VEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALL 421
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
AC D VEL + +E L + + G +VL+SN+YA+ QW+D K+R+ M+E+
Sbjct: 422 NACRVHGD---VELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKK 478
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
+ K PGCS+IE++ V EF+ GD H +EI +L
Sbjct: 479 VKKVPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLL 514
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 177/507 (34%), Positives = 284/507 (56%), Gaps = 42/507 (8%)
Query: 47 KQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
+ +H IK++ SD +A LI + + A VF I ++N++I G
Sbjct: 153 QSLHGMAIKSAVG----SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 208
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLV--VKSKDFNSV 163
+ + G + ++L+ +M + T +L AC +R ++ + ++ N
Sbjct: 209 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVN 268
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR----------- 212
+ ++ Y G ++ A+ LFD M EK+ VTWT M++G+ ++Y
Sbjct: 269 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPK 328
Query: 213 --------------------EGIDLFRKMR-DSGVEVNELTLVSVLSACANLGASELGKW 251
E + +F +++ +++N++TLVS LSACA +GA ELG+W
Sbjct: 329 KDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRW 388
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+H ++ KN I +N + +AL MY+KCG +E+A VF V +++V W+++IGGLA+HGC
Sbjct: 389 IHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGC 448
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
G EAV MF++MQ + +KP+ VT V ACSH GL+++ + +FY M Y + P KHY
Sbjct: 449 GSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYA 508
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VD+L R+ L++A + I MP+ P+ +WG+LL AC AN+ LAE+A RL++L
Sbjct: 509 CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI---HANLSLAEMACTRLLEL 565
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
EP NDG +VL+SNIYA +WD+ ++R+ M+ + K PGCS IEI+ ++HEF+ GD
Sbjct: 566 EPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNA 625
Query: 492 HPCSEEIYSMLEYVAISLREECYAARM 518
HP SE++Y L V L+ Y M
Sbjct: 626 HPMSEKVYGKLHEVMEKLKSNGYEPEM 652
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 244/476 (51%), Gaps = 48/476 (10%)
Query: 11 LTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK 70
L N +N ++ + +S H + L+ +C+ L Q KQ HA +I+ + S ++L
Sbjct: 12 LPRHPNFSNPNQPTTNNERSRHTISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFA 71
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD-- 128
I +L + + + YA VF++I P++F +NT+IR YA I + M+ +
Sbjct: 72 -IAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCY 130
Query: 129 PDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL 185
P+ +T+P L+KA ++ + + +H + +KS S + LI Y + GD+ SA
Sbjct: 131 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSA-VGSDVFVANSLIHCYFSCGDLDSACK 189
Query: 186 LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA 245
+F + EK+VV+W +MING V++ + + ++LF+KM V+ + +T+V VLSACA +
Sbjct: 190 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRD 249
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
E G+ V ++ +N + +N L A+ DMY KCG IE+A R+F + EK+ TW +++ G
Sbjct: 250 LEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 309
Query: 306 LAI-------------------------------HGCGEEAVKMFWQMQMS-GIKPDDVT 333
AI +G EA+ +F ++Q+ IK + +T
Sbjct: 310 YAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQIT 369
Query: 334 LIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
L++ L+AC+ G +E G+ I ++++ ++ N L+ + + L++A EV ++
Sbjct: 370 LVSTLSACAQVGALELGRWIHSYIKKN-GIKMNFYVTSALIHMYSKCGDLEKAREVFNSV 428
Query: 394 PMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN-DGNYVLMSNIYAA 448
+ + +W +++ A G+ A++ K++ N N V +N++ A
Sbjct: 429 E-KRDVFVWSAMIGGLAMHGCGSE------AVDMFYKMQEANVKPNGVTFTNVFCA 477
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 191/510 (37%), Positives = 300/510 (58%), Gaps = 32/510 (6%)
Query: 28 TKSHHHLPLLQKCTHLVQF----------KQVHAQIIKASFDNRTISDTQLAK-LIESL- 75
T S H P L+ C L++ KQ+HA+ ++A + LAK L+ L
Sbjct: 9 TPSTH--PALRHCVALLRLHLAAPSLATVKQLHARALRAGVPP---AHPLLAKHLLFHLA 63
Query: 76 -VNSSQIAYAHLVFNQII-NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFT 133
+ + + YA V +++ +P F+ NTV+R A + + L+ + + PD+ T
Sbjct: 64 SLRAPPLRYAVAVLTRVLPDPDPFSLNTVLRIAASSSRPSLALALHARRLA---PPDTHT 120
Query: 134 YPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
YP LL+AC LR + +H+ K+ +++ L+ Y G +SA +FD++
Sbjct: 121 YPPLLQACARLLSLRHGERIHAEAAKN-GLATLVFVKNSLVHLYGACGLFESAHRVFDEI 179
Query: 191 T--EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
E+N+V+W +M+NG E + +FR+M D + T+VSVL+A A +GA L
Sbjct: 180 PVGERNLVSWNSMLNGFAANGRPNEVLTIFREMLDVNFMPDGFTVVSVLTASAEIGALAL 239
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLA 307
G+ VH ++ K ++ N +G AL D+YAKCG +E+A RVF+ + + V +W S+I GLA
Sbjct: 240 GRRVHVYLTKVGLVENSHVGNALIDLYAKCGGVEDARRVFEEMGARRTVVSWTSLIVGLA 299
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
++G G+EA+++F M+ + P ++T++ VL ACSH GL++ G F M+ +Y + P +
Sbjct: 300 VNGFGKEALELFGIMEREKLVPTEITMVGVLYACSHCGLVDDGFMYFNRMKEEYNIAPRI 359
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+H GC+VDLL RA + EAY+ I MP+EPNAV+W +LL ACA +EL E A R
Sbjct: 360 EHLGCMVDLLGRAGKVKEAYDYILTMPLEPNAVVWRTLLGACAMHK---KLELGEAAWAR 416
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L++L+P + G+YVL+SN+YAA +W D +R+ M + + KNPG S++E+ + V+EF++
Sbjct: 417 LVELDPGHSGDYVLLSNLYAAVGRWADVHVLRKTMVKDGVRKNPGRSLVELRNSVYEFVM 476
Query: 488 GDGRHPCSEEIYSMLEYVAISLREECYAAR 517
GD HP SE+IY ML VA SLR E Y R
Sbjct: 477 GDRSHPESEQIYQMLAEVADSLRREGYIPR 506
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 180/501 (35%), Positives = 282/501 (56%), Gaps = 40/501 (7%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+ +H +K F ++ L+ N + A VF+++ ++ T++ GY
Sbjct: 162 EAIHCAALKCGFVGESVLVGN--ALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGY 219
Query: 107 AEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKACGDLRQVK-GV--HSLVVKSKDFNS 162
A AGL +L+ +M+ G+ P++ T + A G + + G+ H V + S
Sbjct: 220 ARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARS 279
Query: 163 V------------------------------IHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
V ++S T ++ Y GD++SA+ LF M
Sbjct: 280 VNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPR 339
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
+NVV+W+ MI + + E + LFR+M +GV+ + TLVSVLSACA LG +LG+W+
Sbjct: 340 RNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWI 399
Query: 253 HE-FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+E ++ N I L LG AL DM+AKCG + EA ++F + E+NV +WN++I A+HG
Sbjct: 400 YENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQ 459
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
EEA+++F Q++ I PD +T + +L +CSH+GL+ +G+ F M Y++EP V+HY
Sbjct: 460 SEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYA 519
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C++DLL + LL+EA+EV R MPME + WG+LL AC NVE+ ++L++L
Sbjct: 520 CMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMH---GNVEIGACVADKLVEL 576
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
+P + G YVLMS IYA+K +WD +R M++R + KNPGCS IE+ H+F+V D
Sbjct: 577 DPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGVKKNPGCSSIEVEGKFHDFLVADVS 636
Query: 492 HPCSEEIYSMLEYVAISLREE 512
H CSEEIYS L+ + L++E
Sbjct: 637 HACSEEIYSALKNIYFHLKQE 657
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 187/422 (44%), Gaps = 42/422 (9%)
Query: 30 SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
+H L LL+ C + Q+HA + ++L A ++
Sbjct: 35 THPLLSLLESCASFRRLLQLHALLTVTGLAAHRFPASRLLAFCALSTPPRLAHAAAILAR 94
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-------- 141
P+ + T++RG+ A L R + L+ +++ + L D+ T+ +KA
Sbjct: 95 ASPGPNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEH 154
Query: 142 -GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
G + +H +K + L+ FY N + A +FD+M E++VV+WT
Sbjct: 155 GGTPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTT 214
Query: 201 MINGHVKQKNYREGIDLF-RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
+++G+ + E LF R + G+ N +TLV+ +SA +G G +H++V +
Sbjct: 215 LVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEG 274
Query: 260 CIILNDKLGAALTDM-------------------------------YAKCGYIEEALRVF 288
+ + L AL DM YAKCG +E A ++F
Sbjct: 275 GVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLF 334
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
K + +NV +W+ +I + EEAV +F +M +G+ P D TL++VL+AC+ G ++
Sbjct: 335 KDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLD 394
Query: 349 KGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
G+ I+ N K+ V L+D+ + + EA ++ M E N V W +++ A
Sbjct: 395 LGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMA-ERNVVSWNTMIMA 453
Query: 409 CA 410
A
Sbjct: 454 HA 455
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 170/448 (37%), Positives = 267/448 (59%), Gaps = 10/448 (2%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD + D LI + I A +F++I ++N +I GYA+ G +
Sbjct: 161 FDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEAL 220
Query: 117 QLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
L+ +M+ + PD T ++ AC G ++ + VHS + S + + LI
Sbjct: 221 DLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWI-DDHGLGSNLKIVNALIDL 279
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y G+V++A LF ++ K+V++W MI G+ Y+E + LF++M SG N++T+
Sbjct: 280 YSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTM 339
Query: 234 VSVLSACANLGASELGKWVHEFVNKNC--IILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
+S+L ACA LGA + G+W+H +++K + L +L DMYAKCG IE A +VF +
Sbjct: 340 LSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 399
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
+ + N++I G A+HG A +F +M+ +GI+PDD+T + +L+ACSH+G+++ G+
Sbjct: 400 HHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR 459
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
IF +M ++YK+ P ++HYGC++DLL L EA E+I M MEP+ V+W SLL AC
Sbjct: 460 RIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKM 519
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
NVEL E ++LIK+EP N G+YVL+SNIYA +W++ +R L+ ++ + K P
Sbjct: 520 H---GNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVP 576
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIY 499
GCS IEI+ VVHEF++GD HP + EIY
Sbjct: 577 GCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/425 (32%), Positives = 234/425 (55%), Gaps = 44/425 (10%)
Query: 29 KSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLV---NSSQIAYAH 85
++H L LL C L + +HAQ+IK N ++ L++L+E + N + YA
Sbjct: 1 RNHPSLSLLHNCKTLQSLRIIHAQMIKTGLHN---TNYALSRLLEFCILSPNFDGLPYAI 57
Query: 86 LVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR 145
VF I P+ +NT+ RG+A + I+LY MI GL P+S+T+P LLK+C L+
Sbjct: 58 SVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLK 117
Query: 146 ------QVKG------------VH----SLVVKS-------KDFNSVIH----SLTRLIT 172
Q+ G VH S+ VK+ K F+ H S T LIT
Sbjct: 118 VSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALIT 177
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
Y + G ++SAQ +FD++ K+VV+W A+I+G+ N +E +DLF++M + V+ +E T
Sbjct: 178 GYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDEST 237
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
+V+V+SACA G+ +LG+ VH +++ + + N K+ AL D+Y+KCG +E A +F+ +
Sbjct: 238 MVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLS 297
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
K+V +WN++IGG +EA+ +F +M SG P+DVT++++L AC+ G I+ G+
Sbjct: 298 NKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRW 357
Query: 353 IFYNMRRDYKVEPNVKHY-GCLVDLLCRARLLDEAYEVIRNMPMEP----NAVLWGSLLT 407
I + + K N L+D+ + ++ A++V +M NA+++G +
Sbjct: 358 IHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMH 417
Query: 408 ACASA 412
A+A
Sbjct: 418 GRANA 422
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/471 (37%), Positives = 281/471 (59%), Gaps = 10/471 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
++VH +I KA + T L + I+ A ++F+++ + + +I GY
Sbjct: 217 QKVHMEIAKAGLELEPRVGTSLVGM---YAKCGDISKAQVIFDKLPEKNVVTWTLLIAGY 273
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSV 163
A+ G ++L +M + P+ TY +L+ C L K VH +++S +
Sbjct: 274 AQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQS-GYGRE 332
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
I + LIT YC G +K A+ LF + ++VVTWTAM+ G+ + + E IDLFR+M+
Sbjct: 333 IWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQ 392
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
G++ +++T S L++C++ + GK +H+ + L+ L +AL MYAKCG +++
Sbjct: 393 QGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDD 452
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A VF + E+NV W ++I G A HG EA++ F QM+ GIKPD VT +VL+AC+H
Sbjct: 453 ARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTH 512
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
GL+E+G++ F +M DY ++P V+HY C VDLL RA L+EA VI MP +P +WG
Sbjct: 513 VGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWG 572
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL+AC D VE E A E ++KL+P +DG YV +SNIYAA +++DA K+R++M+
Sbjct: 573 ALLSACRIHSD---VERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVME 629
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+R++VK PG S IE++ VH F V D HP ++EIY+ L + ++E+ Y
Sbjct: 630 KRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGY 680
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 155/294 (52%), Gaps = 10/294 (3%)
Query: 122 MIGNGLDPDSFTYPILLKACGDLR---QVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNF 177
MI G S + LL+ C LR Q + VH+ ++KS N + + L++ Y
Sbjct: 87 MILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENT--LLSMYAKC 144
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
G + A+ +FD + ++N+V+WTAMI V E + M+ +G + +++T VS+L
Sbjct: 145 GSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLL 204
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
+A N ++G+ VH + K + L ++G +L MYAKCG I +A +F + EKNV
Sbjct: 205 NAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVV 264
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YN 356
TW +I G A G + A+++ +MQ + + P+ +T ++L C+ +E GK++ Y
Sbjct: 265 TWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYI 324
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
++ Y E V L+ + C+ L EA ++ ++P + V W +++T A
Sbjct: 325 IQSGYGREIWV--VNALITMYCKCGGLKEARKLFGDLPHR-DVVTWTAMVTGYA 375
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 10/227 (4%)
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
KQ +E + + M G V +L CA L + E G+ VH + K+ I N
Sbjct: 73 KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
L L MYAKCG + +A RVF + ++N+ +W ++I EA K + M+++G
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAG 192
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLVDLLCRARLLDE 385
KPD VT +++L A ++ L++ G+++ + + ++EP V LV + + + +
Sbjct: 193 CKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVG--TSLVGMYAKCGDISK 250
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLE 432
A + +P E N V W L+ A ++A+E L K++
Sbjct: 251 AQVIFDKLP-EKNVVTWTLLIAGYAQQGQ------VDVALELLEKMQ 290
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/508 (35%), Positives = 285/508 (56%), Gaps = 45/508 (8%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII--NPSTFAFNTVIR 104
K VH IK SF + L LI + + A+LVF I N ++N+++
Sbjct: 260 KAVHGMAIKTSFGDDVFV---LNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVT 316
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVI 164
G+ + G + + L+ +M G+ P++ T ++ AC + + V D N ++
Sbjct: 317 GFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLT-LGRKVCDYIDRNEMM 375
Query: 165 HSLT---RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY---------- 211
+L I + G+V+ A+ LFD M +++VV+WT +I+G+ K +
Sbjct: 376 MNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSM 435
Query: 212 ---------------------REGIDLFRKMR--DSGVEVNELTLVSVLSACANLGASEL 248
+E + +FR+++ SG +++TL+S LSACA LGA ++
Sbjct: 436 PRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDI 495
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G+W+H ++ K I LN L +L DMY+K G +E+A+ VF + K+V W+++I GLA+
Sbjct: 496 GEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAM 555
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
HG GE A+++F MQ + +KP+ VT +L ACSH+GL+++GK +F M R Y V P K
Sbjct: 556 HGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTK 615
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HY C+VD+L RA L+EA + I MP+ P+A +WG+LL AC N+ELAE A RL
Sbjct: 616 HYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIH---GNLELAEKACSRL 672
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
+++EP N G YVL+SN+YA W+ ++R+ M++ + K GCS IEI+ VHEF+VG
Sbjct: 673 LEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVG 732
Query: 489 DGRHPCSEEIYSMLEYVAISLREECYAA 516
D HP S +IY+ L+ + LR Y A
Sbjct: 733 DNAHPLSRDIYAKLDEIMARLRSHGYVA 760
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 252/501 (50%), Gaps = 59/501 (11%)
Query: 6 VPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKAS--FDNRTI 63
+ S + H + + S +N ++ L Q+CT Q KQ+HAQ+++ + D
Sbjct: 120 IGRSIVQHSSPTPASATATNVGDRA-----LFQQCTSFKQLKQIHAQMLRTNKLHDPYAA 174
Query: 64 SDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI 123
S+ A S S + YA VF+QI P+ +++N +IR A + + + ++ +M+
Sbjct: 175 SELFTAAAFSSF---SALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRML 231
Query: 124 GNG-LDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
+ P+ FT+P+L+KA + R K VH + +K+ F + L LI FY + G
Sbjct: 232 HDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTS-FGDDVFVLNSLIHFYASCGH 290
Query: 180 VKSAQLLFDQM--TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
+ A L+F+ + K++V+W +M+ G V+ + +DLF +MR+ GV N +T+VSV+
Sbjct: 291 LDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVM 350
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
SACA LG+ V +++++N +++N + A DM+ KCG +E A +F + +++V
Sbjct: 351 SACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVV 410
Query: 298 TWNSIIGGLAI---HGCG----------------------------EEAVKMFWQMQM-- 324
+W +II G A HG +EA+ +F ++Q+
Sbjct: 411 SWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTK 470
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
SG +PD VTL++ L+AC+ G ++ G+ I ++++ +++ N L+D+ ++ ++
Sbjct: 471 SGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKE-RIQLNRNLATSLIDMYSKSGDVE 529
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTACASADDG-ANVELAEIAMERLIKLEPFNDGNYVLMS 443
+A EV ++ + +W +++ A G A +EL E +K N V +
Sbjct: 530 KAIEVFHSIG-NKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVK------PNSVTFT 582
Query: 444 NIYAAKAQWDDAGKMRRLMKE 464
N+ A + + +RL E
Sbjct: 583 NLLCACSHSGLVDEGKRLFDE 603
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 194/554 (35%), Positives = 312/554 (56%), Gaps = 62/554 (11%)
Query: 10 QLTHFTNSANSHKNSNTATKSHHH----LPLLQKCTHLVQFKQVHAQIIKASFDNRTISD 65
QL FT+ K + +T SH + LL+ C + KQ+ QI++ F S
Sbjct: 8 QLFKFTSLHFLSKPLHLSTSSHFTKKSCIFLLKNCKSMQHLKQIQTQILRTGFHQ---SG 64
Query: 66 TQLAKLIESLVNSS--QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI 123
L K + + S + YA +FN I P F +N VI+ + + G + + L+ Q+
Sbjct: 65 DTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLR 124
Query: 124 GNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGD 179
GL PD+FTYP + KA G ++R+ + V+ VVKS +F++ + L+ Y G
Sbjct: 125 EEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLEFDTYV--CNSLMDMYAEVGR 182
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
V++ + +F++M +++VV+W +I+G+VK + Y + +D+FR++ + + S++S
Sbjct: 183 VQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSMVSG 242
Query: 240 CANLG----ASELGK---------W---VHEFVNKN------------------------ 259
N G A EL + W ++ +V N
Sbjct: 243 YVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTL 302
Query: 260 -CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
++ + +G AL +MYAKCG+IE++L +F + EK+ +W SII GLA++G +A+++
Sbjct: 303 VALLTDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALEL 362
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
F +M +G+KPDD+T I VL+ACSH GL+E+G++ F +M Y++EP ++HYGCL+DLL
Sbjct: 363 FAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLG 422
Query: 379 RARLLDEAYEVIRNMPMEPNAV---LWGSLLTACASADDGANVELAEIAMERLIKLEPFN 435
RA LDEA E+I P N V L+G+LL+AC + NVE+ E +RL+ +E +
Sbjct: 423 RAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTH---GNVEMGERVAKRLVGIESGD 479
Query: 436 DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
+ L++NIYA+ +W+D K+RR MK+ + K PGCS +E+N +VHEF+VGD HP
Sbjct: 480 SSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEM 539
Query: 496 EEIYSMLEYVAISL 509
EIYSML+ +A L
Sbjct: 540 REIYSMLDSIAKPL 553
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/501 (37%), Positives = 287/501 (57%), Gaps = 15/501 (2%)
Query: 18 ANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVN 77
+N N N H L L + +++ K H +II+ + T L LI +
Sbjct: 55 SNEFSNRNLV---HEILQLCARNGAVMEAKACHGKIIRIDLEGDV---TLLNVLINAYSK 108
Query: 78 SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPIL 137
+ A VF+ ++ S ++NT+I Y + + ++ +M G FT +
Sbjct: 109 CGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSV 168
Query: 138 LKACG---DLRQVKGVHSLVVKS-KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
L ACG D + K +H L VK+ D N ++ T L+ Y G +K A +F+ M +K
Sbjct: 169 LSACGVNCDALECKKLHCLSVKTCIDLN--LYVGTALLDLYAKCGMIKDAVQVFESMQDK 226
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
+ VTW++M+ G+V+ KNY E + L+R+ + +E N+ TL SV+ AC+NL A GK +H
Sbjct: 227 SSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMH 286
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
+ K+ N + ++ DMYAKCG + E+ +F V EKN+ WN+II G A H +
Sbjct: 287 AVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPK 346
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
E + +F +MQ G+ P++VT ++L+ C H GL+E+G+ F MR Y + PNV HY C+
Sbjct: 347 EVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCM 406
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
VD+L RA LL EAYE+I+++P +P A +WGSLL +C N+ELAE+A E+L +LEP
Sbjct: 407 VDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYK---NLELAEVAAEKLFELEP 463
Query: 434 FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHP 493
N GN+VL+SNIYAA QW++ K R+L+++ ++ K G S I+I D VH F VG+ HP
Sbjct: 464 ENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHP 523
Query: 494 CSEEIYSMLEYVAISLREECY 514
EI S L+ + I R+ Y
Sbjct: 524 RIREICSTLDNLVIKFRKFGY 544
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 185/488 (37%), Positives = 283/488 (57%), Gaps = 12/488 (2%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
H L L + +++ K H +II+ + T L LI + + A VF+
Sbjct: 57 HEILQLCARNGAVMEAKACHGKIIRIDLEGDV---TLLNVLINAYSKCGFVELARQVFDG 113
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQV 147
++ S ++NT+I Y + + ++ +M G FT +L ACG D +
Sbjct: 114 MLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 173
Query: 148 KGVHSLVVKS-KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
K +H L VK+ D N ++ T L+ Y G +K A +F+ M +K+ VTW++M+ G+V
Sbjct: 174 KKLHCLSVKTCIDLN--LYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 231
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ KNY E + L+R+ + +E N+ TL SV+ AC+NL A GK +H + K+ N
Sbjct: 232 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 291
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+ ++ DMYAKCG + E+ +F V EKN+ WN+II G A H +E + +F +MQ G
Sbjct: 292 VASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG 351
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
+ P++VT ++L+ C H GL+E+G+ F MR Y + PNV HY C+VD+L RA LL EA
Sbjct: 352 MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 411
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
YE+I+++P +P A +WGSLL +C N+ELAE+A E+L +LEP N GN+VL+SNIY
Sbjct: 412 YELIKSIPFDPTASIWGSLLASCRVYK---NLELAEVAAEKLFELEPENAGNHVLLSNIY 468
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
AA QW++ K R+L+++ ++ K G S I+I D VH F VG+ HP EI S L+ +
Sbjct: 469 AANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLV 528
Query: 507 ISLREECY 514
I R+ Y
Sbjct: 529 IKFRKFGY 536
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/488 (35%), Positives = 280/488 (57%), Gaps = 39/488 (7%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
++ +I+ FD+ +I LV+ ++ A +F++ ++N++I GY
Sbjct: 176 EILGHVIQLGFDSDLFVHN---AIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYV 232
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-------------------- 147
GL LY +M + PD T ++ A L +
Sbjct: 233 RCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVP 292
Query: 148 --KGVHSLVVKSKDFNS-----------VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
+ + +K K+ + + S T ++ Y FG ++SA LF++M EK+
Sbjct: 293 LANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKD 352
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
VV W A+I G V+ K +E + LF +M+ S V +++T+V+ LSAC+ LGA ++G W+H
Sbjct: 353 VVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHH 412
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+V+K+ + +N LG AL DMYAKCG I++A++VF+ + +N TW +II GLA+HG
Sbjct: 413 YVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHA 472
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+ F +M G+ PD++T I VL+AC H GL+++G++ FY M Y + P +KHY CLV
Sbjct: 473 AISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLV 532
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
DLL RA L+EA E+IR+MP EP+AV+WG+L + NV + E A +L++L+P
Sbjct: 533 DLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFG---SRIHGNVHMGERAASKLLELDPH 589
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+ G YVL++N+Y W+ A K+R++M+ER + K PGCS IE+N +V++F++ D HP
Sbjct: 590 DGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQ 649
Query: 495 SEEIYSML 502
SE+IY L
Sbjct: 650 SEKIYECL 657
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 217/443 (48%), Gaps = 43/443 (9%)
Query: 5 LVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTIS 64
L+ L H + + S+ +S+ L LL+ CT + + K++HAQ+I IS
Sbjct: 29 LLHTRSLPHHKDKPTNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTGL----IS 84
Query: 65 DT-QLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQ 121
D L++L+ ++ + Y + N N + F++N IRGY E+ + LY
Sbjct: 85 DGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVFSWNMAIRGYVESENPINAVLLYRN 144
Query: 122 MIGNGLD-PDSFTYPILLKACGDLRQVKGVHSLV--VKSKDFNSVIHSLTRLITFYCNFG 178
M+ G PD++TYP+L K C + ++ V F+S + +I + G
Sbjct: 145 MLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCG 204
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
++ +A+ LFD+ +++V+W ++ING+V+ E DL+ KM + V +E+T++ V+S
Sbjct: 205 ELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVS 264
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC-------------------- 278
A A L LG+ +H+ + + + L L AL DMY KC
Sbjct: 265 ASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVS 324
Query: 279 -----------GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
G +E A+R+F + EK+V WN++IGG +EA+ +F +MQ S +
Sbjct: 325 WTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSV 384
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
PD +T++ L+ACS G ++ G + + + + + + NV LVD+ + + +A
Sbjct: 385 APDKITVVNCLSACSQLGALDVGIWMHHYVDK-HNLTMNVALGTALVDMYAKCGNIKKAI 443
Query: 388 EVIRNMPMEPNAVLWGSLLTACA 410
+V MP N++ W +++ A
Sbjct: 444 QVFEEMPGR-NSLTWTAIICGLA 465
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 268/424 (63%), Gaps = 11/424 (2%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
VF ++ ++ +I GY + GL + I L+ +M ++P+ T+ +L ACG L +
Sbjct: 166 VFEDMLVRDVVSWTGLISGYVKTGLFNEAISLFLRM---NVEPNVGTFVSILGACGKLGR 222
Query: 147 V---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
+ KG+H LV K + + ++ Y V A+ +FD+M EK++++WT+MI
Sbjct: 223 LNLGKGIHGLVFKCL-YGEELVVCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIG 281
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
G V+ ++ RE +DLF +M+ SG E + + L SVLSACA+LG + G+WVHE+++ + I
Sbjct: 282 GLVQCQSPRESLDLFSQMQASGFEPDGVILTSVLSACASLGLLDCGRWVHEYIDCHRIKW 341
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+ +G L DMYAKCG I+ A R+F + KN+ TWN+ IGGLAI+G G+EA+K F +
Sbjct: 342 DVHIGTTLVDMYAKCGCIDMAQRIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLV 401
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD-YKVEPNVKHYGCLVDLLCRARL 382
SG +P++VT +AV TAC H GL+++G++ F M Y + P ++HYGC+VDLLCRA L
Sbjct: 402 ESGTRPNEVTFLAVFTACCHNGLVDEGRKYFNEMTSPLYNLSPCLEHYGCMVDLLCRAGL 461
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLM 442
+ EA E+I+ MPM P+ + G+LL+ S + NV + ++ L +E + G YVL+
Sbjct: 462 VGEAVELIKTMPMPPDVQILGALLS---SRNTYGNVGFTQEMLKSLPNVEFQDSGIYVLL 518
Query: 443 SNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
SN+YA +W + +RRLMK++ I K PG S+I ++ + HEF+VGD HP SEEIY +L
Sbjct: 519 SNLYATNKKWAEVRSVRRLMKQKGISKAPGSSIIRVDGMSHEFLVGDNSHPQSEEIYVLL 578
Query: 503 EYVA 506
+A
Sbjct: 579 NILA 582
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 199/382 (52%), Gaps = 14/382 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI-I 92
L L+ KC L FKQ+HA ++ ++ + T+ A + + + + Y Q
Sbjct: 13 LDLIHKCNDLRSFKQIHAHLLTSALVTNDLVVTKAANFLGKHI--TDVHYPCNFLKQFDW 70
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR---QVKG 149
+ S+F N +I GYA L I +Y + NG PD +T+P +LK+C +V+
Sbjct: 71 SLSSFPCNLLISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQ 130
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
HS+ VK+ + I+ L+ Y GD A +F+ M ++VV+WT +I+G+VK
Sbjct: 131 FHSVSVKTGLWCD-IYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTG 189
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ E I LF +M VE N T VS+L AC LG LGK +H V K C+ + +
Sbjct: 190 LFNEAISLFLRMN---VEPNVGTFVSILGACGKLGRLNLGKGIHGLVFK-CLYGEELVVC 245
Query: 270 -ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
A+ DMY KC + +A ++F + EK++ +W S+IGGL E++ +F QMQ SG +
Sbjct: 246 NAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFE 305
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD V L +VL+AC+ GL++ G+ + + ++++ +V LVD+ + +D A
Sbjct: 306 PDGVILTSVLSACASLGLLDCGRWV-HEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQR 364
Query: 389 VIRNMPMEPNAVLWGSLLTACA 410
+ MP + N W + + A
Sbjct: 365 IFNGMPSK-NIRTWNAYIGGLA 385
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/489 (38%), Positives = 298/489 (60%), Gaps = 17/489 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKAS--FDNRTISDTQLAKLI--ESLVNSSQIAYAHLVFN 89
L L CT L Q+HA +KA T+L L + + +AYA VF+
Sbjct: 32 LAYLPHCTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFD 91
Query: 90 QIINPSTFA-FNTVIRGYAEAGLGHRGIQ----LYTQMIGNGLDPDSFTYPILLKACGDL 144
+I +P +NT++RGYA G G G + ++ +M+ G+ PD++T+ LLKAC
Sbjct: 92 RIPHPGDVVWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASA 151
Query: 145 R---QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
R + + H + VK+ + T LI Y GDV++A+++FD+M + VV++ AM
Sbjct: 152 RAGEEGRQAHGVAVKAGAAEHEYVAPT-LINMYAECGDVRAARVMFDRMDGECVVSYNAM 210
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
I V+ E + LFR+M+ G++ +TL+SVLSACA LGA ELG+W+H+++ K +
Sbjct: 211 ITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRL 270
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
K+ AL DMYAKCG +E+A+ VF+ + ++ W+ ++ A HG G EA+ MF +
Sbjct: 271 DSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEE 330
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
M+ G+KPDDVT + VL ACSH+G++ +G + F +M R+Y + +KHYGC+ DLL R+
Sbjct: 331 MKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSG 389
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVL 441
L+ AY+ I +P++P A+LW +LL+ACA D V++ + ER+++L+ + G+YV+
Sbjct: 390 QLERAYKFIDELPIKPTAILWRTLLSACAGHGD---VDMGKRVFERILELDDSHGGDYVI 446
Query: 442 MSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSM 501
SN+ A +W++ +R+LM E+ +VK PGCS IEI+++VHEF GDG HP S+E M
Sbjct: 447 FSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRM 506
Query: 502 LEYVAISLR 510
++ V L+
Sbjct: 507 VDEVIEQLK 515
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/488 (35%), Positives = 280/488 (57%), Gaps = 39/488 (7%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
++ +I+ FD+ +I LV+ ++ A +F++ ++N++I GY
Sbjct: 176 EILGHVIQLGFDSDLFVHN---AIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYV 232
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-------------------- 147
GL LY +M + PD T ++ A L +
Sbjct: 233 RCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVP 292
Query: 148 --KGVHSLVVKSKDFNS-----------VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
+ + +K K+ + + S T ++ Y FG ++SA LF++M EK+
Sbjct: 293 LANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKD 352
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
VV W A+I G V+ K +E + LF +M+ S V +++T+V+ LSAC+ LGA ++G W+H
Sbjct: 353 VVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHH 412
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+V+K+ + +N LG AL DMYAKCG I++A++VF+ + +N TW +II GLA+HG
Sbjct: 413 YVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHA 472
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+ F +M G+ PD++T I VL+AC H GL+++G++ FY M Y + P +KHY CLV
Sbjct: 473 AISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLV 532
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
DLL RA L+EA E+IR+MP EP+AV+WG+L + NV + E A +L++L+P
Sbjct: 533 DLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFG---SRIHGNVHMGERAASKLLELDPH 589
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+ G YVL++N+Y W+ A K+R++M+ER + K PGCS IE+N +V++F++ D HP
Sbjct: 590 DGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQ 649
Query: 495 SEEIYSML 502
SE+IY L
Sbjct: 650 SEKIYECL 657
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 217/443 (48%), Gaps = 43/443 (9%)
Query: 5 LVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTIS 64
L+ L H + + S+ +S+ L LL+ CT + + K++HAQ+I IS
Sbjct: 29 LLHTRSLPHHKDKPTNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTGL----IS 84
Query: 65 DT-QLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQ 121
D L++L+ ++ + Y + N N + F++N IRGY E+ + LY
Sbjct: 85 DGFALSRLVAFCAISEWRNLDYCDKILNNAANLNXFSWNMAIRGYVESENPINAVLLYRN 144
Query: 122 MIGNGLD-PDSFTYPILLKACGDLRQVKGVHSLV--VKSKDFNSVIHSLTRLITFYCNFG 178
M+ G PD++TYP+L K C + ++ V F+S + +I + G
Sbjct: 145 MLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCG 204
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
++ +A+ LFD+ +++V+W ++ING+V+ E DL+ KM + V +E+T++ V+S
Sbjct: 205 ELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVS 264
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC-------------------- 278
A A L LG+ +H+ + + + L L AL DMY KC
Sbjct: 265 ASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVS 324
Query: 279 -----------GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
G +E A+R+F + EK+V WN++IGG +EA+ +F +MQ S +
Sbjct: 325 WTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSV 384
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
PD +T++ L+ACS G ++ G + + + + + + NV LVD+ + + +A
Sbjct: 385 APDKITVVNCLSACSQLGALDVGIWMHHYVDK-HNLTMNVALGTALVDMYAKCGNIKKAI 443
Query: 388 EVIRNMPMEPNAVLWGSLLTACA 410
+V MP N++ W +++ A
Sbjct: 444 QVFEEMPGR-NSLTWTAIICGLA 465
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/488 (38%), Positives = 277/488 (56%), Gaps = 13/488 (2%)
Query: 33 HLPLLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
++ +L C L KQ+HAQI+++ + T L K+ + + A VF
Sbjct: 249 YMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKM---YIKCGAVKDAREVFE 305
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQ 146
+ N A+NT+I G ++G ++ +M+ + PD TY +L AC G L
Sbjct: 306 CLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLAC 365
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
K +H+ VK S + LI Y G +K A+ +FD+M +++VV+WTA++ G+
Sbjct: 366 GKEIHARAVKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYA 424
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
E F+KM GVE N++T + VL AC+N A + GK +H V K I +
Sbjct: 425 DCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLA 484
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+ AL MY KCG +E+A+RV + + ++V TWN++IGGLA +G G EA++ F M+
Sbjct: 485 VANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEE 544
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
++P+ T + V++AC L+E+G+ F +MR+DY + P KHY C+VD+L RA L EA
Sbjct: 545 MRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEA 604
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
+VI MP +P+A +WG+LL AC + NVE+ E A E+ +KLEP N G YV +S IY
Sbjct: 605 EDVILTMPFKPSAAMWGALLAACRAH---GNVEIGEQAAEQCLKLEPQNAGTYVSLSFIY 661
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
AA W D K+R+LMKER + K PG S IE+ VH F+ GD HP +EEIYS LE +
Sbjct: 662 AAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALT 721
Query: 507 ISLREECY 514
++ Y
Sbjct: 722 KQIKSLGY 729
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 204/396 (51%), Gaps = 14/396 (3%)
Query: 30 SHHHLPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL 86
S+ ++ LLQ C L KQVH I++ L KL V+ + A
Sbjct: 44 SYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKL---YVHCGSVNEARR 100
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD--- 143
+F++ N S ++N +I GYA GLG L+T M GL+PD FT+ +L AC
Sbjct: 101 LFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAA 160
Query: 144 LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
L + VH V+++ N+ LI+ Y G V+ A+ +FD M ++ V+WT +
Sbjct: 161 LNWGREVHVRVMEAGLANNATVG-NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTG 219
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
+ + +E + + M GV + +T ++VLSAC +L A E GK +H + ++
Sbjct: 220 AYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHS 279
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+ ++ ALT MY KCG +++A VF+ + ++V WN++IGGL G EEA MF +M
Sbjct: 280 DVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRML 339
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
+ PD VT +A+L+AC+ G + GKEI +D V +V+ L+++ +A +
Sbjct: 340 KECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVS-DVRFGNALINMYSKAGSM 398
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
+A +V MP + + V W +L+ AD G VE
Sbjct: 399 KDARQVFDRMP-KRDVVSWTALVG--GYADCGQVVE 431
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 159/309 (51%), Gaps = 9/309 (2%)
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
G DS+ Y LL++C DL K VH +++ ++ + L+ Y + G V
Sbjct: 38 KGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRF-GMKPNVYIINTLLKLYVHCGSVN 96
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
A+ LFD+ + K+VV+W MI+G+ + +E +LF M+ G+E ++ T VS+LSAC+
Sbjct: 97 EARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACS 156
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
+ A G+ VH V + + N +G AL MYAKCG + +A RVF + ++ +W +
Sbjct: 157 SPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTT 216
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+ G A G +E++K + M G++P +T + VL+AC +EKGK+I + +
Sbjct: 217 LTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQI-VES 275
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
+ +V+ L + + + +A EV +P + + W +++ D +E A
Sbjct: 276 EHHSDVRVSTALTKMYIKCGAVKDAREVFECLP-NRDVIAWNTMIGGLV---DSGQLEEA 331
Query: 422 EIAMERLIK 430
R++K
Sbjct: 332 HGMFHRMLK 340
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
D+ + + G +V+ V +L +C +GK VHE + + + N + L +Y
Sbjct: 30 DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
CG + EA R+F K+V +WN +I G A G G+EA +F MQ G++PD T +
Sbjct: 90 VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149
Query: 336 AVLTACSHAGLIEKGKEI 353
++L+ACS + G+E+
Sbjct: 150 SILSACSSPAALNWGREV 167
>gi|357511223|ref|XP_003625900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500915|gb|AES82118.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 467
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/472 (38%), Positives = 283/472 (59%), Gaps = 23/472 (4%)
Query: 23 NSNTATKSHHHLPLLQK-CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ- 80
N N + + + LL+ C + KQ+ AQII + + T + E L+ +SQ
Sbjct: 2 NGNMSCLAERVVKLLKSFCRTQIHVKQIQAQIIIHNLQSHT-------TIAEHLITASQS 54
Query: 81 ---IAYAHLVFNQII-NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPI 136
+ Y +F +I P F FN++IR ++ + + + + LY+ M N + P++FT+P
Sbjct: 55 HNLLNYVSPLFTHLIPKPHVFIFNSLIRAFSHSHIPNTPLSLYSHMHKNSILPNNFTFPF 114
Query: 137 LLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
L K+ D Q + V++ V+K N I+ L+ Y ++G ++ + LFD+M ++
Sbjct: 115 LFKSLSDSHDFVQSQCVYTHVIKLGYVND-IYVNNSLLDVYASYGCLELCRQLFDEMPQR 173
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
+VV+WT MI G+ Y + + +F +M+ GV N +T+V+ LSACA+ A E+G W+
Sbjct: 174 DVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMGVWID 233
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
+ V +N L+ LG AL DMY KCG +EE L+VF + EKNV T N +I GLA+ E
Sbjct: 234 DMVRRNGWELDVILGTALIDMYVKCGRVEEGLKVFCDMKEKNVFTLNVVIKGLALAKSVE 293
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD--YKVEPNVKHYG 371
EA+ F +M++ G++ D+VTL+ VL+ACSH+GL+EKG+ IF +M D Y PNVKHY
Sbjct: 294 EALLWFNRMELDGVRADEVTLVTVLSACSHSGLVEKGRFIF-SMLVDGKYGFLPNVKHYA 352
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VDLL RA L EA+++I+ MP EP A +WGSLL S DD +E +E A +L++L
Sbjct: 353 CMVDLLARAGQLQEAFDIIKCMPFEPTAAMWGSLLLGSKSRDD---LEFSEFAATKLVEL 409
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVH 483
EP+N YV +SN+YA +W D ++R +MKER + K+ GCS +E+ H
Sbjct: 410 EPYNTAYYVQLSNLYAEAGRWSDVERIRGMMKERGLTKDLGCSSVEVEHQRH 461
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 180/481 (37%), Positives = 288/481 (59%), Gaps = 15/481 (3%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTIS---DTQLAKLIESLVNSSQIAYAHLVFNQII 92
L+++C L + HA ++ T + LA + + +YA +F+QI
Sbjct: 26 LVRRCPGLRALRGAHAHFLRLRLPRLTYAFALSKLLASCAAASATTVASSYARALFDQIP 85
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQ-----LYTQMIGNGLD-PDSFTYPILLKACGDLRQ 146
P+ F +N++IR + +G LY +M+ G P+SFT +LKAC L +
Sbjct: 86 EPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSPAPNSFTLAFVLKACTALGE 145
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE-KNVVTWTAMINGH 205
+ +H+ + T L+ Y +V A+ +FD M E KN+V W++MI G+
Sbjct: 146 GQQLHAQAF-GHGLEPSPYVQTGLLNLYARCEEVALARNVFDGMVEDKNLVAWSSMIGGY 204
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ E + LFR M+ GV +E+T+VSV+SACA GA +LGKWVH F+++ I ++
Sbjct: 205 SRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWVHAFIDRKGITVDL 264
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
+L AL DMYAKCG IE A VF ++E++ W+++I GLA+HG E+A+ +F +M
Sbjct: 265 ELSTALIDMYAKCGLIERAKSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGLFSRMLQL 324
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
++P++VT + VL+AC+H+GL++ G+ + M ++ +E ++++YGC+VDLLCR+ LLDE
Sbjct: 325 KVRPNNVTFVGVLSACAHSGLVDDGRRYWCTM-QELGIEASMENYGCMVDLLCRSGLLDE 383
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
A+ + MP+ PN+V+W +LL A S++ +++ E+A RL +LEP N NYVL+SN+
Sbjct: 384 AFSFVTGMPISPNSVIWRNLLVASKSSN---RIDIVELASRRLFELEPQNPENYVLLSNL 440
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
YA +QWD MR+ MK+ N+ GCS IEIN +H+F+V DG HP ++I +L +
Sbjct: 441 YALNSQWDRVRYMRKKMKDNNVTVVAGCSSIEINGYLHKFVVSDGSHPEIKKIRLVLREI 500
Query: 506 A 506
A
Sbjct: 501 A 501
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 271/476 (56%), Gaps = 38/476 (7%)
Query: 69 AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD 128
+ LI +I A +F+++ + +N +I GY++ ++LY +M +G +
Sbjct: 155 SALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTE 214
Query: 129 PDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN--------- 176
PD+ +L AC G+L K +H + K F H T L+ Y N
Sbjct: 215 PDAIILCTVLSACAHAGNLSYGKAIHQFI-KDNGFRVGSHIQTSLVNMYANCGAMHLARE 273
Query: 177 ----------------------FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG 214
G V+ A+ +FD+M EK++V W+AMI+G+ + E
Sbjct: 274 VYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEA 333
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
+ LF +M+ + +++T++SV+SACAN+GA KW+H + +KN + AL DM
Sbjct: 334 LQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDM 393
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
YAKCG + +A VF+ + KNV +W+S+I A+HG + A+ +F +M+ I+P+ VT
Sbjct: 394 YAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTF 453
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
I VL ACSHAGL+E+G++ F +M ++++ P +HYGC+VDL CRA L +A E+I MP
Sbjct: 454 IGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMP 513
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
PN ++WGSL++AC + +EL E A RL++LEP +DG V++SNIYA + +WDD
Sbjct: 514 FPPNVIIWGSLMSAC---QNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDD 570
Query: 455 AGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
G +R+LMK + + K CS IE+N+ VH FM+ D H S+EIY L+ V L+
Sbjct: 571 VGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLK 626
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 206/417 (49%), Gaps = 40/417 (9%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA--YAHLVFNQIIN 93
LL C L KQ+HAQI+++ DN + +L +L + S A YA +F+ I N
Sbjct: 18 LLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIPN 77
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GV 150
P T N ++R ++ + LY + NG D F++P LLKA L + +
Sbjct: 78 PPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEI 137
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H L K F++ + LI Y G + A+ LFD+M+ ++VVTW MI+G+ + +
Sbjct: 138 HGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAH 197
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
Y + L+ +M+ SG E + + L +VLSACA+ G GK +H+F+ N + + +
Sbjct: 198 YDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTS 257
Query: 271 LTDMYAKC-------------------------------GYIEEALRVFKIVLEKNVCTW 299
L +MYA C G +++A +F ++EK++ W
Sbjct: 258 LVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCW 317
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMR 358
+++I G A EA+++F +MQ I PD +T+++V++AC++ G + + K I Y +
Sbjct: 318 SAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADK 377
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+ + + L+D+ + L +A EV NMP + N + W S++ A A D
Sbjct: 378 NGFGRTLPINN--ALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHGDA 431
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 103/262 (39%), Gaps = 51/262 (19%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
LVQ K +H K F RT+ LI+ + A VF + + +++++
Sbjct: 365 LVQAKWIHTYADKNGF-GRTLPINN--ALIDMYAKCGNLVKAREVFENMPRKNVISWSSM 421
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNS 162
I +A G I L+ +M ++P+ T+ +L AC
Sbjct: 422 INAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACS-------------------- 461
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVT-----WTAMINGHVKQKNYREGIDL 217
+ G V+ Q F M ++ ++ + M++ + + + R+ ++L
Sbjct: 462 -------------HAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMEL 508
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN-DKLGA--ALTDM 274
M N + S++SAC N G ELG EF + L D GA L+++
Sbjct: 509 IETM---PFPPNVIIWGSLMSACQNHGEIELG----EFAATRLLELEPDHDGALVVLSNI 561
Query: 275 YAKCGYIEEALRVFKIVLEKNV 296
YAK ++ V K++ K V
Sbjct: 562 YAKEKRWDDVGLVRKLMKHKGV 583
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 191/510 (37%), Positives = 293/510 (57%), Gaps = 46/510 (9%)
Query: 42 HLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
+L KQ H +I + ++ +AK IE+ N+ + YA+ VF P+T+ NT
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLN---VAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNT 83
Query: 102 VIRGYA---EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVV 155
+IR + E I +Y ++ PD+FT+P +LK + V + +H VV
Sbjct: 84 MIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVV 143
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV-------------------- 195
F+S +H +T LI Y + G + A+ +FD+M K+V
Sbjct: 144 VF-GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEAR 202
Query: 196 -------------VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
V+WT +I+G+ K E I++F++M VE +E+TL++VLSACA+
Sbjct: 203 SLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACAD 262
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
LG+ ELG+ + +V+ + L A+ DMYAK G I +AL VF+ V E+NV TW +I
Sbjct: 263 LGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTI 322
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
I GLA HG G EA+ MF +M +G++P+DVT IA+L+ACSH G ++ GK +F +MR Y
Sbjct: 323 IAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG 382
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
+ PN++HYGC++DLL RA L EA EVI++MP + NA +WGSLL A D +EL E
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD---LELGE 439
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
A+ LIKLEP N GNY+L++N+Y+ +WD++ MR +MK + K G S IE+ + V
Sbjct: 440 RALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRV 499
Query: 483 HEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
++F+ GD HP E I+ +L+ + + ++ +
Sbjct: 500 YKFISGDLTHPQVERIHEILQEMDLQIQSK 529
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/489 (38%), Positives = 298/489 (60%), Gaps = 17/489 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKAS--FDNRTISDTQLAKLI--ESLVNSSQIAYAHLVFN 89
L L CT L Q+HA +KA T+L L + + +AYA VF+
Sbjct: 32 LAYLPHCTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFD 91
Query: 90 QIINPS-TFAFNTVIRGYAEAGLGHRGIQ----LYTQMIGNGLDPDSFTYPILLKACGDL 144
+I +P +NT++RGYA G G G + ++ +M+ G+ PD++T+ LLKAC
Sbjct: 92 RIPHPGDVIWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASA 151
Query: 145 R---QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
R + + H + VK+ + T LI Y GDV++A+++FD+M + VV++ AM
Sbjct: 152 RAGEEGRQAHGVAVKAGAAEHEYVAPT-LINMYAECGDVRAARVMFDRMDGECVVSYNAM 210
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
I V+ E + LFR+M+ G++ +TL+SVLSACA LGA ELG+W+H+++ K +
Sbjct: 211 ITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRL 270
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
K+ AL DMYAKCG +E+A+ VF+ + ++ W+ ++ A HG G EA+ MF +
Sbjct: 271 DSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEE 330
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
M+ G+KPDDVT + VL ACSH+G++ +G + F +M R+Y + +KHYGC+ DLL R+
Sbjct: 331 MKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSG 389
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVL 441
L+ AY+ I +P++P A+LW +LL+ACA D V++ + ER+++L+ + G+YV+
Sbjct: 390 QLERAYKFIDELPIKPTAILWRTLLSACAGHGD---VDMGKRVFERILELDDSHGGDYVI 446
Query: 442 MSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSM 501
SN+ A +W++ +R+LM E+ +VK PGCS IEI+++VHEF GDG HP S+E M
Sbjct: 447 FSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRM 506
Query: 502 LEYVAISLR 510
++ V L+
Sbjct: 507 VDEVIEQLK 515
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/490 (36%), Positives = 282/490 (57%), Gaps = 38/490 (7%)
Query: 32 HHLPL--LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
H LPL L C+ + + KQ H+QII+ + + + ++I+ S
Sbjct: 20 HKLPLYGLDSCSTMAELKQYHSQIIRLGL---SADNDAMGRVIKFCAISKS--------- 67
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQ 146
GY L I +Y++M+ + P+ FTYP L++AC + +
Sbjct: 68 ---------------GYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEE 112
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK--NVVTWTAMING 204
K +H+ V+K F + SL LI Y NF ++ A+ +FD M ++ N V+W AMI
Sbjct: 113 GKQIHAHVLKF-GFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAA 171
Query: 205 HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
+V+ E LF +MR V +++ S+LSAC LGA E GKW+H ++ K+ I L+
Sbjct: 172 YVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELD 231
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
KL + DMY KCG +E+A VF + +K + +WN +IGGLA+HG GE A+++F +M+
Sbjct: 232 SKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMER 291
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
+ PD +T + VL+AC+H+GL+E+GK F M ++P ++H+GC+VDLL RA LL+
Sbjct: 292 EMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLE 351
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSN 444
EA ++I MP+ P+A + G+L+ AC N EL E +++I+LEP N G YVL++N
Sbjct: 352 EARKLINEMPVNPDAGVLGALVGACRIH---GNTELGEQIGKKVIELEPHNSGRYVLLAN 408
Query: 445 IYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEY 504
+YA+ +W+D K+R+LM +R + K PG S+IE V EF+ G HP ++EIY+ L+
Sbjct: 409 LYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDE 468
Query: 505 VAISLREECY 514
+ ++R Y
Sbjct: 469 ILETIRSIGY 478
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 302/522 (57%), Gaps = 50/522 (9%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL C L + +VH+ IIK F++ L L N + A +F++ +
Sbjct: 117 LLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGN---LNLARTLFDESL 173
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
++NT+I+GYAE + L+ +M +G+ PD FT+ L C L + K
Sbjct: 174 VRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQ 233
Query: 150 VHSLVVK---SKDFNSVIHS------------------------------LTRLITFYCN 176
+H+ V K S D N ++ S + ++ Y
Sbjct: 234 IHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYAR 293
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
G++ A+ LF+ M E++V++WTAMI+G+ + E ++LF++M G++ +E+TLV+V
Sbjct: 294 CGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAV 353
Query: 237 LSACANLGASELGKWV-HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
LSACA LGA +LGK + H+++ N L AA+ DMYAKCG I+ AL +F+ V KN
Sbjct: 354 LSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRV-GKN 412
Query: 296 VCT---WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
+ T +NS+I GLA HG GE A+ +F ++ +G+KPD+VT + VL AC H+GLIE+GK+
Sbjct: 413 MKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKK 472
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
+F +M Y ++P ++HYGC+VDLL R L+EAY++++ MP E N+V+W +LL+AC +
Sbjct: 473 LFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTH 532
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
NV++ EIA ++L+++E + YVL+SNI A QW++A ++R++M++ I K PG
Sbjct: 533 ---GNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPG 589
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
S IE+ +H F+ D HP +EI ML+ +A+ L+ Y
Sbjct: 590 WSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGY 631
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 202/398 (50%), Gaps = 39/398 (9%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LL+ C Q Q+HAQ I ++ S ++L L + + ++ L+F+QI
Sbjct: 13 LCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDC 72
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL-DPDSFTYPILLKACGDLRQVKG--- 149
P+ F +NT+IRGY+ + I LY MI G+ P++FT+P LL +C L ++
Sbjct: 73 PNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHE 132
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
VHS ++K F S + LI Y FG++ A+ LFD+ +++V++ MI G+ +
Sbjct: 133 VHSHIIK-HGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVN 191
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN--CIILNDKL 267
+ LF +M++SG+ +E T V++ S C+ L +GK +H V KN I N L
Sbjct: 192 QPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILL 251
Query: 268 GAALTDMYAKCGYIEEALRVFKI--------------------------------VLEKN 295
+A+ DMYAKCG I A RVF + E++
Sbjct: 252 KSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERD 311
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
V +W ++I G + G EA+++F +M+ GIKPD+VTL+AVL+AC+ G + GK +++
Sbjct: 312 VISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYH 371
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
+ N ++D+ + +D A E+ R +
Sbjct: 372 QYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRV 409
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/493 (36%), Positives = 274/493 (55%), Gaps = 13/493 (2%)
Query: 25 NTATKSHHHLPLLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQI 81
N S H P L K ++ Q HA I+K FD+ L I N
Sbjct: 98 NGVVPSRHTFPPLLKAVFKLRDANPFQFHAHILKFGFDSDLFVRNSL---ISGYSNCGLF 154
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA- 140
+ VF+ + ++ +I G+ + + +M +G+ + T +LKA
Sbjct: 155 EFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKAT 214
Query: 141 --CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
D+R + +H +++ + + L+ Y G AQ +FD+M +NVVTW
Sbjct: 215 RKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTW 274
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
TA+I G+V+ + + +G+ +F +M S V NE TL SVLSACA++GA G+ VH +V K
Sbjct: 275 TALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIK 334
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
N I +N +G L D YAKCG +EEA+ VF+ + EKNV TW ++I G A HG AV +
Sbjct: 335 NSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDL 394
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
F M S + P++VT I VL+AC+H GL+E+G+ +F +M+ + +EP HY C+VDL
Sbjct: 395 FHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFG 454
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGN 438
R LL+EA +I MPMEP +WG+L +C D EL + A R+IKL+P + G
Sbjct: 455 RKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKD---YELGKYAASRVIKLQPSHSGR 511
Query: 439 YVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC-SEE 497
Y L++N+Y+ WDD ++R+ MK++ +VK+PGCS IE+ +HEF+ D + P S++
Sbjct: 512 YTLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIEVKGKLHEFIAFDDKKPLESDD 571
Query: 498 IYSMLEYVAISLR 510
+Y L+ V + +R
Sbjct: 572 LYKTLDNVGVQMR 584
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 192/370 (51%), Gaps = 9/370 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQ+H ++ + T D L++L+ ++Q YA + QI PS +++++ +
Sbjct: 19 KQIHCLVLTSPI-FYTRRDLFLSRLLRRCTAATQFRYARRLLCQIQTPSIQLWDSLVGHF 77
Query: 107 AEAGLGHRGIQL--YTQMIGNGLDPDSFTYPILLKACGDLRQVKG--VHSLVVKSKDFNS 162
+ +R + Y QM NG+ P T+P LLKA LR H+ ++K F+S
Sbjct: 78 SGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAVFKLRDANPFQFHAHILKF-GFDS 136
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ LI+ Y N G + +FD +K+VV+WTAMI+G V+ + E + F +M+
Sbjct: 137 DLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMK 196
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK-LGAALTDMYAKCGYI 281
SGV NE+T+VSVL A G+ +H F + + D +G++L DMY KCG
Sbjct: 197 RSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCY 256
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
++A +VF + +NV TW ++I G C E+ + +F +M S + P++ TL +VL+AC
Sbjct: 257 DDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSAC 316
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
+H G + +G+ + + ++ +E N L+D + L+EA V + E N
Sbjct: 317 AHVGALHRGRRVHCYVIKN-SIEINTTVGTTLIDFYAKCGCLEEAILVFERL-REKNVYT 374
Query: 402 WGSLLTACAS 411
W +++ A+
Sbjct: 375 WTAMINGFAA 384
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/453 (39%), Positives = 273/453 (60%), Gaps = 12/453 (2%)
Query: 41 THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFN 100
+ L + K+VH I+K FD+ + L + S + LVF +++ + ++
Sbjct: 142 SALREGKEVHCNIVKHGFDSDVFVQSSLVAMYS---QSGETLGMELVFGEMVVRNIVSWT 198
Query: 101 TVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKS 157
VI GY + G+ ++ +M+G+G P++ T +L AC L + K +H +K
Sbjct: 199 AVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKL 258
Query: 158 KDFNSVIHSLTR-LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID 216
V SLT LI Y G+V++A+ LFD M +N+V+W AMI + + +
Sbjct: 259 GVDPDV--SLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVK 316
Query: 217 LFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYA 276
LFR+M+ V+ + +T+VSV+SACA+LGA G+W+HE V + + +N + AL DMYA
Sbjct: 317 LFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYA 376
Query: 277 KCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIA 336
KCG I+ A VF+ + ++V +W S+IG A HG GE+A+K+F +M+ G+KP+ T A
Sbjct: 377 KCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAA 436
Query: 337 VLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPME 396
V TAC H+GL+E+G++ F +M RDY + P V+H C+VDLL RA L EAYE I MP+E
Sbjct: 437 VFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVE 496
Query: 397 PNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAG 456
P+ +WG+LL +C +N+ELAE+ E+L L+P YVLMSNIYA +W+DA
Sbjct: 497 PDVSVWGALLGSCRIH---SNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAA 553
Query: 457 KMRRLMKERNIVKNPGCSVIEINDVVHEFMVGD 489
++R+LM+ER + K PG S++E+N H F+ G
Sbjct: 554 RLRKLMEERELKKIPGHSLVEVNRRFHTFLSGS 586
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/420 (32%), Positives = 232/420 (55%), Gaps = 17/420 (4%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDN 60
+LK L P ++ F N H ++S ++L L C+ L ++HA ++
Sbjct: 9 LLKGLAPIKRVL-FDFRTNYH------SRSFNYL--LNCCSSLPDLSRIHALVVTNGCGQ 59
Query: 61 RTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYT 120
+ T+L +I + + + YA +F+Q+ F +NT+IRGYA+AG + LY+
Sbjct: 60 NLLLSTKL--IITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYS 117
Query: 121 QMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNF 177
M G GL PD++T+P ++++C LR+ K VH +VK F+S + + L+ Y
Sbjct: 118 NMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVK-HGFDSDVFVQSSLVAMYSQS 176
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
G+ +L+F +M +N+V+WTA+I G+V+ + ++EG+ +FR+M SG + N +TLVSVL
Sbjct: 177 GETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVL 236
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
ACA L LGK +H + K + + L AL +Y KCG +E A +F ++ +N+
Sbjct: 237 PACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLV 296
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
+WN++I + G AVK+F +MQ + D +T+++V++AC+ G + G+ + +
Sbjct: 297 SWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELV 356
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+R +E NV L+D+ + +D A EV +P + V W S++ ACAS G +
Sbjct: 357 KRK-GLEINVSITNALIDMYAKCGNIDLAREVFERLPCR-SVVSWTSMIGACASHGHGED 414
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 172/350 (49%), Gaps = 17/350 (4%)
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
SF Y LL C L + +H+LVV + +++ S +IT C + A+ +FDQM
Sbjct: 31 SFNY--LLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQM 88
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
+++V W +I G+ E + L+ M +G+ + T V+ +CA L A GK
Sbjct: 89 PKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGK 148
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
VH + K+ + + ++L MY++ G VF ++ +N+ +W ++I G +
Sbjct: 149 EVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNR 208
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKH 369
+E + +F +M SG +P+ VTL++VL AC+ + GK I Y ++ V+P+V
Sbjct: 209 YFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIK--LGVDPDVSL 266
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
L+ L + ++ A + M ++ N V W +++ A + GAN + + R +
Sbjct: 267 TNALIALYGKCGNVETARSLFDGMVVQ-NLVSWNAMIAAYEQNNAGANA----VKLFRRM 321
Query: 430 KLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
+ E D +Y+ M ++ +A A A R M E +VK G +EIN
Sbjct: 322 QAEKV-DFDYITMVSVISACASL-GALNTGRWMHE--LVKRKG---LEIN 364
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/500 (36%), Positives = 295/500 (59%), Gaps = 40/500 (8%)
Query: 26 TATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAH 85
TA ++ + +L KC L + +Q+HAQ+IK + N + ++L S + YA
Sbjct: 2 TAISTNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYAS 61
Query: 86 LVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG--NGLDPDSFTYPILLKACGD 143
VF++I +P++F F +I+G+++ + LY +M+ N F+ P +LKACG
Sbjct: 62 SVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGK 121
Query: 144 L------RQVKGV-------------HSLVVKSKDFNSV--------------IHSLTRL 170
L RQV G +S+V DF + + S +
Sbjct: 122 LLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSM 181
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNE 230
I Y G+++ A+ +F+ M++K+VVTWT+MI+ +V+ + + +DLFR+M G+ +
Sbjct: 182 IAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDG 241
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK-LGAALTDMYAKCGYIEEALRVFK 289
+VSVLSA A+LG E GKW+H +V+ N I L+ +G+AL DMY+KCGYIE A VF+
Sbjct: 242 PAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFR 301
Query: 290 -IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
I +N+ WNS+I GLAIHG EA+ +F +M+ I+P+++T + +L+ CSH GL+E
Sbjct: 302 SISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVE 361
Query: 349 KGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+G+ F +M YK+ P ++HYGC++DL RA L++A VI+NMP E + + W ++L+
Sbjct: 362 EGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILS- 420
Query: 409 CASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIV 468
AS G ++E+ + A R I+L P + +YVL+SNIYA +WDD K+R +M++R +
Sbjct: 421 -ASMKHG-HIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVK 478
Query: 469 KNPGCSVIEINDVVHEFMVG 488
K GCS + +N VHEF++G
Sbjct: 479 KIAGCSSMLVNGKVHEFLLG 498
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 174/460 (37%), Positives = 279/460 (60%), Gaps = 39/460 (8%)
Query: 86 LVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKACGDL 144
++F+++ + ++N +I GY + I ++ +M +GL PD T L AC L
Sbjct: 193 MLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTAL 252
Query: 145 RQV---KGVHSLVVKSKDFNSVIHS-----------------------------LTRLIT 172
+++ K +H V + F +I + T +++
Sbjct: 253 KRLELGKKIHHYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVS 312
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
Y N G+++ A+ LF+ ++VV WTAMING+V+ + E + LFR+M+ V+ ++
Sbjct: 313 GYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFI 372
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
+VS+L+ CA GA E GKW+HEF+++N I ++ +G AL +MYAKCG+IE+AL +F +
Sbjct: 373 VVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLR 432
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
K+ +W SII GLA++G +A+++F +M+ +G++PDD+T I VL+ACSH GL+E+G++
Sbjct: 433 VKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRK 492
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV---LWGSLLTAC 409
F +MR +Y+++P V+HYGCLVDLL RA LL+EA E+I+ +P E A+ L+GSLL+AC
Sbjct: 493 FFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSAC 552
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
NVE+ E ++L+K E + + L++NIYA +W+D K+RR MK+ + K
Sbjct: 553 RIY---GNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKK 609
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
PGCS IE++ ++HEF G HP EIY ML +A L
Sbjct: 610 TPGCSSIEVDSIIHEFFSGHPSHPEMREIYYMLNIMAKPL 649
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 221/443 (49%), Gaps = 48/443 (10%)
Query: 19 NSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNS 78
++ N T + L+ C + KQ+HAQI + +S +L N
Sbjct: 26 STFTNPTTGLSQQSCISYLKSCKSMTHLKQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNG 85
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
+ + YA +F I P +N +I+ +A+ G R + L++++ +GL PD+FTYP +
Sbjct: 86 N-LNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVF 144
Query: 139 KACGDLRQV---KGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
KA G L +V + + LV K+ +F++ + + LI Y ++LFD+M +++
Sbjct: 145 KAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRN--SLIDMYAQLALTDVMKMLFDEMPDRD 202
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMR-DSGVEVNELTLVSVLSACANLGASELGKWVH 253
V++W MI+G+VK + + + I++F +M+ +SG+ +E T+VS LSAC L ELGK +H
Sbjct: 203 VISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIH 262
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
+V N + +G AL DMY KCG + A VF+ + KNV W +++ G A CGE
Sbjct: 263 HYVRDN-VKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYA--NCGE 319
Query: 314 ---------------------------------EAVKMFWQMQMSGIKPDDVTLIAVLTA 340
EAV +F +MQ+ +KPD ++++LT
Sbjct: 320 LEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTG 379
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
C+ G IE+GK I + + ++ + L+++ + +++A E+ + ++ A
Sbjct: 380 CAQTGAIEQGKWI-HEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTAS 438
Query: 401 LWGSLLTACASADDGANVELAEI 423
W S++ C A +G + E+
Sbjct: 439 -WTSII--CGLAMNGKTSKALEL 458
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 177/371 (47%), Gaps = 27/371 (7%)
Query: 138 LKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNF--GDVKSAQLLFDQMTEKNV 195
LK+C + +K +H+ + + ++ SL +L+ F + G++ A+ +F + +
Sbjct: 44 LKSCKSMTHLKQIHAQIFRVGLHQDIV-SLNKLMAFCTDPFNGNLNYAEKMFKYIRYPCL 102
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
+ + +I K+ NY+ + LF K+R+ G+ + T V A LG + +
Sbjct: 103 LIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGL 162
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
V K + + + +L DMYA+ + +F + +++V +WN +I G E+A
Sbjct: 163 VTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDA 222
Query: 316 VKMFWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
+ +F +MQ SG+ PD+ T+++ L+AC+ +E GK+I + +R + K P + + L+
Sbjct: 223 INVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVRDNVKFTPIIGN--ALL 280
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
D+ C+ L A V MP + N + W ++++ A+ EL E L + P
Sbjct: 281 DMYCKCGCLSIARAVFEEMPSK-NVICWTTMVSGYANCG-----ELEE--ARELFEGSPI 332
Query: 435 NDGN-YVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN--------PGCS---VIEINDVV 482
D + M N Y ++D+A + R M+ R + + GC+ IE +
Sbjct: 333 RDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWI 392
Query: 483 HEFMVGDGRHP 493
HEF + + R P
Sbjct: 393 HEF-IDENRIP 402
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 195/556 (35%), Positives = 305/556 (54%), Gaps = 81/556 (14%)
Query: 36 LLQKCTHLVQFKQ---VHAQIIKA---SFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
LL +C + +Q + AQII + S D I+ K I + + ++ L+FN
Sbjct: 27 LLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIA----VKFIGVSSSHGNLRHSVLIFN 82
Query: 90 QIIN-PSTFAFNTVIRGYAEAGLGHRGIQLYTQ--MIGNGLDPDSFTYPILLKACGDLRQ 146
++ P+ FA+N +++ +++ H I + ++ N +PD +T+ +LKAC L Q
Sbjct: 83 HFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQ 142
Query: 147 V---KGVHSLVVK--------------------------SKDFNSVIH----SLTRLITF 173
V + VH V K K F+ ++ S LI+
Sbjct: 143 VLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISG 202
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN----------------------- 210
YC G V A+++FD M EKN+V+W+ MI+G+ + N
Sbjct: 203 YCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMI 262
Query: 211 --------YREGIDLFRKMR-DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
Y + I+LFR+M+ + G+ N++TLVSVLSACA+LGA +LGKW+H F+ +N I
Sbjct: 263 AGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKI 322
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
+ LG AL DMYAKCG + EA VF + E++V +W+ II GLA++G EA F +
Sbjct: 323 EVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAE 382
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
M G++P+D++ + +LTAC+HAGL++KG E F M + Y + P ++HYGC+VDLL RA
Sbjct: 383 MIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAG 442
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVL 441
LD+A +I +MPM+PN ++WG+LL C D E E + R+++L+ + G+ V
Sbjct: 443 RLDQAESLINSMPMQPNVIVWGALLGGCRIYKDA---ERGERVVWRILELDSNHSGSLVY 499
Query: 442 MSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSM 501
++N+YA+ + DDA R M++ +K PGCS IEIN+ V+EF +GD HP S IYSM
Sbjct: 500 LANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSM 559
Query: 502 LEYVAISLREECYAAR 517
+ + ++ Y +
Sbjct: 560 IRELKWKMKVAGYKPK 575
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 176/490 (35%), Positives = 281/490 (57%), Gaps = 28/490 (5%)
Query: 35 PLLQK-CTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
PLL K C L + ++ ++ FD+ + L LV+ + A +F++
Sbjct: 83 PLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHL---LVSCGDLDGARKMFDK 139
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK-G 149
++N++I GY G + + Y +M G+ PD T ++ +C L + G
Sbjct: 140 SCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLG 199
Query: 150 VHS-LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQ----------------LLFDQMTE 192
S ++ + L+ Y G+++SA+ +LFD+M +
Sbjct: 200 RESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPD 259
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
K+VV W AMI G+V +E + LF +M+ + +E+T+VS LSAC+ LGA ++G W+
Sbjct: 260 KDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWI 319
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG 312
H ++ K+ + LN LG AL DMYAKCG I +A++VF+ + +N TW +II GLA+HG
Sbjct: 320 HHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNA 379
Query: 313 EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC 372
A+ F +M + + PD+VT + +L+AC H GL+E+G++ F M + + P +KHY C
Sbjct: 380 HGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSC 439
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLE 432
+VDLL RA LL+EA E+I++MP+E +AV+WG+L AC NV + E A +L++++
Sbjct: 440 MVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIH---GNVLMGERAASKLLQMD 496
Query: 433 PFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRH 492
P + G YVL++N+Y W +AGK R+LM++R + K PGCS IE+N +V+EF+V D H
Sbjct: 497 PHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSH 556
Query: 493 PCSEEIYSML 502
P SE+IY L
Sbjct: 557 PQSEQIYECL 566
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 192/337 (56%), Gaps = 21/337 (6%)
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKACGDLRQVKGVH 151
NP+TF++N IRG+ ++ + LY +++ +G PD++TYP+L KAC L ++
Sbjct: 40 NPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGS 99
Query: 152 SLV--VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
++ V F+S I +I + GD+ A+ +FD+ +++V+W +MING+V++
Sbjct: 100 EILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRG 159
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E ++ +R+M+ G++ +E+T++ V+S+CA L +LG+ H ++ +N + L L
Sbjct: 160 WAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLAN 219
Query: 270 ALTDMYAKCGYIEEALRVFKIVL----------------EKNVCTWNSIIGGLAIHGCGE 313
AL DMY KCG +E A ++F + +K+V WN++IGG G+
Sbjct: 220 ALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGK 279
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
EA+ +F +MQ I PD+VT+++ L+ACS G ++ G I + + + +++ NV L
Sbjct: 280 EALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK-HELSLNVALGTAL 338
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+D+ + + +A +V + +P N++ W ++++ A
Sbjct: 339 IDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLA 374
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 184/512 (35%), Positives = 294/512 (57%), Gaps = 40/512 (7%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+ LL C + + K++HA + ++L L +L + + Y++ + + N
Sbjct: 17 ISLLDGCKSMFELKRIHALLFTLGISQDETIKSKLL-LFSALSPARDLDYSYKLILNVPN 75
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GV 150
P+TF +NT+IR ++ + I ++ +M+ NG+ PD TYP L+KA L + V
Sbjct: 76 PTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKATSKLLNQELGMAV 135
Query: 151 HSLVVKS----KDF--NSVIHSLT------------------RLITF------YCNFGDV 180
H +VKS F NS+IH L+T+ Y GD+
Sbjct: 136 HVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWNAMLDGYAKCGDL 195
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
A+ +F+ M EK+VV+W+++I+G+VK + Y E + LF +M G NE+TLVS L AC
Sbjct: 196 NMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMANEVTLVSALCAC 255
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI--VLEKNVCT 298
A+LGA E G+ +H ++ +N + L L +L DMYAKCG I EAL VF+ + E +V
Sbjct: 256 AHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTVFRACSLQEADVLI 315
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
WN+IIGGLA HG +EA+ +F +M+M GI PD++T + +L+ C+H GL+E+ F++
Sbjct: 316 WNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGGLVEEA-WYFFDCL 374
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
R + + P V+HY C+VD L RA + EAY+ + MP++P + + G+LL+ C +
Sbjct: 375 RKHGMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGALLSGCMKH---GKL 431
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
++A++ RL++L+P +DG YV +SNIYAA +WDDA +R M+ + + K+PG S IE+
Sbjct: 432 DIAKVVGRRLVELDPNHDGRYVGLSNIYAADKRWDDAKNIREAMERKGVKKSPGFSFIEV 491
Query: 479 NDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
V+H FM D H E+I+ ML + ++
Sbjct: 492 YGVLHRFMAHDKTHGDCEQIFMMLNLIVDQMK 523
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 191/519 (36%), Positives = 294/519 (56%), Gaps = 37/519 (7%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDN 60
+ K P ++ T T + +H S + H +PL+ L Q Q+HAQI F +
Sbjct: 13 LFKPTSPPAKTTTVTTTTRAHGPSRSPET--HFIPLIHASNTLPQLHQIHAQI----FLH 66
Query: 61 RTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLY 119
S++++ +LI S + + YA +F +P+ F FN +IRG AE + +
Sbjct: 67 NLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHF 126
Query: 120 TQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVK-SKDFNSVIHSLTRLITFYC 175
M+ + PD T P +LK+ L V + +H V+K +F+S + L+ Y
Sbjct: 127 VLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVR--VSLVDMYV 184
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
G++ LFD+ Q+N E I L+ +GV N+LT+VS
Sbjct: 185 KIGELGFGLQLFDESP----------------QRNKAESILLW-----NGVRPNDLTVVS 223
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
L AC +GA ++G+ +H +++ N LN +G AL DMYAKCG I+ A RVF K+
Sbjct: 224 ALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKD 283
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
+ TW+ +I G AIHGC ++A++ F +M+ +GI PD+V +A+LTACSH+G +++G F
Sbjct: 284 LLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFE 343
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+MR DY +EP +KHY +VDLL RA LDEA I++MP+ P+ V+WG+L AC +
Sbjct: 344 SMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHK-- 401
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
N+E+AE+ E+L++LEP + G+YV +SN+YAA +W+D ++R LMK R + K+PG S
Sbjct: 402 -NIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSY 460
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
IE+ VH F+ GD H +EEI LE + S ++E Y
Sbjct: 461 IEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGY 499
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 187/516 (36%), Positives = 297/516 (57%), Gaps = 43/516 (8%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ-IAYAHLVFNQII 92
L LL+KC + KQ HAQ+ +N T + +++ S + + + YA VF QI
Sbjct: 9 LVLLEKCKSMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRVFEQIQ 68
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
NP+ +NT+I+ + +Q++ +M+ + L PD++T P +LKACG K
Sbjct: 69 NPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHDCSFGKM 128
Query: 150 VH----------------SLVVKSKDFNSVIH--------------SLTRLITFYCNFGD 179
+H SL+ F V+ S + +I+ Y GD
Sbjct: 129 IHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGD 188
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
V SA+L FD+ EK+ W AMI+G+V+ ++E + LFR M+ + + +E VS+LSA
Sbjct: 189 VDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSA 248
Query: 240 CANLGASELGKWVHEFVNK-NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
CA+LGA E+G W+H+ +N+ + L+ +L +L DMYAKCG +E A R+F + ++V
Sbjct: 249 CAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVC 308
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
WN++I G+A+HG G+ A+K+F+ M+ G+KPDD+T IAV TACS++G+ +G + M
Sbjct: 309 WNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMC 368
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA----VLWGSLLTACASADD 414
Y + P +HYGCLVDLL RA L +EA +IR + N + W + L+AC +
Sbjct: 369 SVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACC---N 425
Query: 415 GANVELAEIAMERLIKLE-PFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
+LAE+A E++++L+ + G YVL+SN+YAA + DA ++R +MK + K PGC
Sbjct: 426 HGETQLAELAAEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAPGC 485
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
S +EI+ V+ EF+ G+ HP EEI+S+L+ + + L
Sbjct: 486 SSVEIDGVISEFIAGEKTHPQMEEIHSVLKKMHMQL 521
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 184/506 (36%), Positives = 291/506 (57%), Gaps = 17/506 (3%)
Query: 17 SANSHKNSNTATKSHHHLPLLQKCTH---LVQFKQVHAQIIKASFD-NRTISDTQLAKLI 72
S + + ++ + +LQ C +++ K H + ++ + T+S+ LI
Sbjct: 50 SPGRYSDEFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNV----LI 105
Query: 73 ESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSF 132
+ + A VF+ ++ S ++NT+I Y + + ++ +M G F
Sbjct: 106 NAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEF 165
Query: 133 TYPILLKACG---DLRQVKGVHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
T +L ACG D + K +H L +K S D N ++ T L+ Y G + A +F+
Sbjct: 166 TISSVLSACGANCDALECKKLHCLSMKTSLDLN--LYVGTALLDLYAKCGMINDAVQVFE 223
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
M +K+ VTW++M+ G+V+ KNY E + L+R+ + +E N+ TL SV+ AC+NL A
Sbjct: 224 SMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 283
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
GK +H + K+ N + ++ DMYAKCG + E+ +F V EKN+ WN+II G A
Sbjct: 284 GKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAK 343
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
H +E + +F +MQ G+ P++VT ++L+ C H GL+E+G+ F MR Y + PNV
Sbjct: 344 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVV 403
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HY C+VD+L RA LL EAYE+I+++P EP A +WGSLL +C N+ELAE+A ++L
Sbjct: 404 HYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCK---NLELAEVAAKKL 460
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
+LEP N GN+VL+SNIYAA QW++ K R+L+++ ++ K G S I+I D VH F VG
Sbjct: 461 FELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVG 520
Query: 489 DGRHPCSEEIYSMLEYVAISLREECY 514
+ HP EI +ML+ + I LR+ Y
Sbjct: 521 ESSHPRIREICTMLDNLVIELRKFGY 546
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 182/501 (36%), Positives = 292/501 (58%), Gaps = 22/501 (4%)
Query: 16 NSANSHKNSNTATKSHH--------HLPLLQKCTHLVQFKQVHAQI-IKASFDNRTISDT 66
S N H ++K H ++ L C +L Q +QVHAQ + +N +++
Sbjct: 40 TSLNLHNREEESSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVVAN- 98
Query: 67 QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG 126
KLI + A+ +F+ + + +++ ++ G+A+ G + ++I G
Sbjct: 99 ---KLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCG 155
Query: 127 LDPDSFTYPILLKACGDLRQV---KGVHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKS 182
PD++T P +++AC DL+ + + +H +V K D + + L+ Y +++
Sbjct: 156 ARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFV--CAALVDMYVKCREIED 213
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A+ LFD+M E+++VTWT MI G+ + E + LF KMR+ GV +++ +V+V+ ACA
Sbjct: 214 ARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAK 273
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
LGA + + +++ + L+ LG A+ DMYAKCG +E A +F + EKNV +W+++
Sbjct: 274 LGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAM 333
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
I HG G +A+ +F M SG+ PD +TL ++L ACSHAGL+E+G F +M DY
Sbjct: 334 IAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYS 393
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
V +VKHY C+VDLL RA LDEA ++I++M +E + LWG+ L AC + D V LAE
Sbjct: 394 VRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKD---VVLAE 450
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
A L++L+ N G+YVL+SNIYA +W+D K+R LM +R + K PG + IE+++
Sbjct: 451 KAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKS 510
Query: 483 HEFMVGDGRHPCSEEIYSMLE 503
H+F VGD HP S+EIY ML+
Sbjct: 511 HQFSVGDTTHPRSKEIYEMLK 531
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 174/468 (37%), Positives = 280/468 (59%), Gaps = 14/468 (2%)
Query: 41 THLVQFKQVHAQI-IKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAF 99
T+L Q +QVH Q + N +++ KL+ + A+ +F+ + + ++
Sbjct: 749 TNLTQVRQVHXQASVHGMLQNLIVAN----KLVXFYSYYRALDDAYGLFDGMCVRDSVSW 804
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVK 156
+ ++ G+A+ G + ++I G PD++T P +++AC DL+ + + +H +V K
Sbjct: 805 SVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYK 864
Query: 157 -SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
D + + L+ Y +++ A+ LFD+M E+++VTWT MI G+ + N E +
Sbjct: 865 FGLDLDHFV--CAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESL 922
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
LF KMR+ GV +++ +V+V+ ACA LGA + + +++ + L+ LG A+ DM+
Sbjct: 923 VLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMH 982
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
AKCG +E A +F + EKNV +W+++I HG G +A+ +F M SGI P+ +TL+
Sbjct: 983 AKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLV 1042
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
++L ACSHAGL+E+G F M DY V +VKHY C+VDLL RA LDEA ++I +M
Sbjct: 1043 SLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTX 1102
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
E + LWG+ L AC + D V LAE A L++L+P N G+Y+L+SNIYA +W+D
Sbjct: 1103 EKDEGLWGAFLGACRTHKD---VXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDV 1159
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
K+R LM +R + K PG + IE+++ H+F VGD HP S+EIY ML+
Sbjct: 1160 AKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLK 1207
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 175/474 (36%), Positives = 281/474 (59%), Gaps = 9/474 (1%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
+FKQ HA+I+K + + L +L + + YA +F Q+ P +F FNT++R
Sbjct: 3 EFKQSHARILKXGLFXDSFCASNLVATC-ALSDWGSMDYACSIFRQMDEPGSFZFNTMMR 61
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFN 161
G+ + + Y +M G+ PD+FTYP LLKAC L V+ VH+ ++K N
Sbjct: 62 GHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLEN 121
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
V LI+ Y G++ +F+QM E++V +W+A+I H + + + L M
Sbjct: 122 DVFVQ-NSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDM 180
Query: 222 RDSGV-EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
+ G E LVSVLSAC +LGA +LG+ VH F+ +N LN + +L +MY KCG
Sbjct: 181 SNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGX 240
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
+ + + +F+ + +KN +++ +I GLA+HG G E +++F +M G++PDD+ + VL A
Sbjct: 241 LYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNA 300
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
CSHAGL+++G + F M+ ++ +EP ++HYGC+VDL+ RA +DEA E+I++MPMEPN V
Sbjct: 301 CSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDV 360
Query: 401 LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRR 460
LW SLL+A + N++ EIA ++L KL+ +YV++SN+YA +W+D + R
Sbjct: 361 LWRSLLSASKVHN---NLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRT 417
Query: 461 LMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
M + + + PG S++E+ +H F+ D HP SE +Y ML + L+ E Y
Sbjct: 418 NMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGY 471
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 179/504 (35%), Positives = 287/504 (56%), Gaps = 12/504 (2%)
Query: 18 ANSHKNSNTATKSHHHLPLLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIES 74
A S ++ H PLL K ++ + Q +A I+K D L + +
Sbjct: 91 AYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPFQFYAHIVKFGLDFDAFVQNSL---VSA 147
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
+ + + +F + ++ +I G G ++ + +M +G++ D T
Sbjct: 148 FAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTI 207
Query: 135 PILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
+L A LR V + VH V+S ++ + L+ Y G A +F++M
Sbjct: 208 VSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMP 267
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+N+V+W A+I G+V+ Y+E + +F++M G+E N+ T+ S L+ACA LG+ + G+W
Sbjct: 268 TRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRW 327
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+HE+V+++ + LN KLG AL DMY+KCG ++EAL VF+ + K+V W ++I GLA+ G
Sbjct: 328 LHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGD 387
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
++ +F QM S ++P+ VT + VL+AC+H GL+++G E+F M DY++EPNV HYG
Sbjct: 388 ALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYG 447
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VDLL RA L+EA + I +MPMEP +WG+L + C EL E LIKL
Sbjct: 448 CMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHK---AFELGEHIGNHLIKL 504
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
+P + G Y+L++N+Y+ +W+ A +RRLMK + + K+PGCS IE+N V+HEF+ D
Sbjct: 505 QPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPGCSWIEVNGVIHEFIAFDKS 564
Query: 492 HPCSEEIYSMLEYVAISLREECYA 515
H S +Y MLE V+ L+ YA
Sbjct: 565 HTESINVYMMLESVSAQLKLATYA 588
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 218/393 (55%), Gaps = 13/393 (3%)
Query: 27 ATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL 86
AT H L KC KQ + +I + + T L+ ++ S + + Y L
Sbjct: 5 ATLRHSILCCFHKCGTFDHLKQTTSILITSGLAHHTFF---LSDILRS--ATKDLGYTLL 59
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
+F+++ P F +NT+IRG++ + + Y+++ +G+ PD T+P+LLKA LR
Sbjct: 60 LFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 147 VKG--VHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
++ +VK DF++ + + L++ + + G V ++ LF + +K+VV+WTA+IN
Sbjct: 120 ENPFQFYAHIVKFGLDFDAFVQN--SLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALIN 177
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF-VNKNCII 262
G ++ E ++ F +MR SGVEV+E+T+VSVL A A L G+WVH F V +I
Sbjct: 178 GCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVI 237
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
+ +G+AL DMY+KCGY ++A++VF + +N+ +W ++I G +EA+K+F +M
Sbjct: 238 WDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEM 297
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
+ GI+P+ T+ + LTAC+ G +++G+ + + R K+ N K LVD+ +
Sbjct: 298 IIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRS-KLGLNSKLGTALVDMYSKCGC 356
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+DEA V +P + + W +++ A D
Sbjct: 357 VDEALLVFEKLPAK-DVYPWTAMINGLAMRGDA 388
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 185/497 (37%), Positives = 300/497 (60%), Gaps = 17/497 (3%)
Query: 21 HKNSNTATKSHHH--LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNS 78
H SN+ + +HH L L CT + Q KQ+HAQ I+ + + + ++++ +
Sbjct: 15 HAISNSDSFTHHRRLLLFLNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILH-FSSL 73
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEA-GLGHRGIQLYTQMIGNG-LDPDSFTYPI 136
+ YA VF+QI NP++F +N +IR A + I LY +M+ G + D T+P
Sbjct: 74 HDLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPF 133
Query: 137 LLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
+LKAC L + + +H+ ++K F+S ++ L+ FY + A+ +FD+M+E+
Sbjct: 134 VLKACAYLFALSEGEQIHAQILK-LGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSER 192
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
++V+W +I+ V+ + ++LF +M+ E + T+ S+ +ACA +G+ LG W H
Sbjct: 193 SLVSWNVVIDAFVRFGEFDAALNLFGEMQ-KFFEPDGYTIQSIANACAGMGSLSLGMWAH 251
Query: 254 EFVNK--NCIILNDKL-GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
F+ K + +ND L +L DMY KCG +E AL++F + +++V +WNS+I G + HG
Sbjct: 252 VFLLKKFDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHG 311
Query: 311 CGEEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
A++ F M + + P+ +T + VL+AC+H GL+ +G+ F M +YK++P ++H
Sbjct: 312 EVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEH 371
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
YGCLVDLL RA L+DEA +V+ NMPM P+ V+W SLL AC + G VEL+E R++
Sbjct: 372 YGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAG--VELSEEMARRVL 429
Query: 430 KLE-PFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
+ E G YVL+S +YA+ ++W+D G +R+LM ++ +VK PGCS IEI+ V HEF G
Sbjct: 430 EAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAG 489
Query: 489 DGRHPCSEEIYSMLEYV 505
D HP +EEIYS L+ +
Sbjct: 490 DTSHPQTEEIYSALDVI 506
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/466 (37%), Positives = 276/466 (59%), Gaps = 14/466 (3%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
LV K H + KA D + L I ++ +A VF+++ + ++N++
Sbjct: 144 LVHGKIGHCLVFKAGLDGDEYVNHSL---ITMYARCGEMGFARKVFDEMGDRDLVSWNSM 200
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK- 158
I GY++ G I L+ +M G +PD T +L ACGDL + + V V++ K
Sbjct: 201 ISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKM 260
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
+ NS + S LI Y GD+ SA+ +FD M K+VVTW A+I G+ + E I LF
Sbjct: 261 EVNSYMGS--ALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLF 318
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
MR++G + +T++ VLSAC+ +GA +LGKWV ++ + + + +AL DMYAKC
Sbjct: 319 NGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKC 378
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG--IKPDDVTLIA 336
G +++A+RVF+ + KN +WN++I LA HG +EA+ +F +M ++P+D+T I
Sbjct: 379 GSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIG 438
Query: 337 VLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPME 396
VL+AC HAGL+++G+++F +M + + P V+HY C+VDL RA LL EA+++I+ MP +
Sbjct: 439 VLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGK 498
Query: 397 PNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAG 456
P+ ++ GSLL AC N ++ E ++ +++E N GNYV+ S IYA +WDD+
Sbjct: 499 PDEIVLGSLLGACQRR---RNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSA 555
Query: 457 KMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
KMR LM++ + K PGCS I+I VHEF GD H S IY +L
Sbjct: 556 KMRVLMRQCGVSKTPGCSWIDIGAHVHEFHAGDSLHNHSMNIYQLL 601
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 148/405 (36%), Positives = 229/405 (56%), Gaps = 33/405 (8%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQ-------FKQVHAQIIKASFDNRTISDTQLAKLIESL 75
N N T+ HH L +K L++ KQ+HAQ++ S L+ +
Sbjct: 19 NLNFQTQKEHHQTLTEKLLSLIKQCKSKNLLKQIHAQMLINSIPKPNF-------LLSKI 71
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHR-GIQLYTQMIGNGLDPDSFTY 134
++ +AYA LVFNQ+ P+ +AFN ++RG A + ++LY ++ GL ++FTY
Sbjct: 72 IDLKDLAYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTY 131
Query: 135 PILLKACGDLRQV---KGVHSLVVKSK-DFNSVI-HSLTRLITFYCNFGDVKSAQLLFDQ 189
P L ACG++R + K H LV K+ D + + HSL IT Y G++ A+ +FD+
Sbjct: 132 PFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSL---ITMYARCGEMGFARKVFDE 188
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
M ++++V+W +MI+G+ K +E I LF +MR+ G E +E+TLVSVL AC +LG LG
Sbjct: 189 MGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLG 248
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
+WV FV + + +N +G+AL DMY KCG + A RVF + K+V TWN+II G A +
Sbjct: 249 RWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQN 308
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
G EA+ +F M+ +G PD VT+I VL+ACS G ++ GK + + E ++H
Sbjct: 309 GASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWV-----ETHASEKGLQH 363
Query: 370 ----YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
L+D+ + LD+A V +MP N V W ++++A A
Sbjct: 364 DVYVASALIDMYAKCGSLDDAVRVFESMP-HKNEVSWNAMISALA 407
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 196/535 (36%), Positives = 299/535 (55%), Gaps = 77/535 (14%)
Query: 22 KNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQI 81
+ ++ +T L + C +L+ KQ+HA +I F++ + +L ++ S I
Sbjct: 5 RTNDRSTNRKQPSSLWKNCNNLLALKQIHATLIIKGFNSNRAALRELI-FAGAMTISGAI 63
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM------------------- 122
YAH VF QI P F +NT++RG +++ + + LYTQM
Sbjct: 64 NYAHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGC 123
Query: 123 ----------------IGNGLDPDSFTYPILL---KACGDLRQVKGVH------------ 151
+ G + +SF L+ CGDL + +
Sbjct: 124 TRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWS 183
Query: 152 ----------SLVVKSKDFNSV----IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVT 197
L V + F+ + + S +IT Y G++++A+ LFD+ EK+VVT
Sbjct: 184 ALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVT 243
Query: 198 WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH---- 253
W MI G+V + R+ +++F +MR+ G +E+T++S+LSACA+LG ++G+ +H
Sbjct: 244 WNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSIS 303
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
E + +L LG AL DMYAKCG IE AL+VFK + EK+V TWNS+IGGLA HG E
Sbjct: 304 EMTRGDLSVL---LGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAE 360
Query: 314 EAVKMFWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC 372
E++K+F +MQ + IKP+++T + V+ ACSHAG +E+G+ F MR Y +EPN+ H+GC
Sbjct: 361 ESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGC 420
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLE 432
+VDLL RA LL EA+E+I M +EPNA++W +LL AC NVEL +A ERL+KL
Sbjct: 421 MVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVH---GNVELGRLANERLLKLR 477
Query: 433 PFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND-VVHEFM 486
G+YVL+SNIYA+ +WD A ++R+LM + + K G S+IE +D V +F+
Sbjct: 478 RDESGDYVLLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRSLIEADDRAVMQFL 532
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 185/490 (37%), Positives = 286/490 (58%), Gaps = 17/490 (3%)
Query: 34 LPL-LQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
PL L+ C + F +++H ++IK + T L I+ I A+ +F
Sbjct: 126 FPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTL---IDVYSGGRAIGSAYKLFV 182
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG 149
++ + A+ ++I GY L +R + L ++ + D + I++ ++ +K
Sbjct: 183 GMLERNIVAWTSMISGYI---LCNR-VALARRLFDLAPERDVVLWNIMVSGYIEIGDMKA 238
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
L +++ S ++ Y N GDV++ + LF++M E+NV +W +I G+
Sbjct: 239 ARKLFDTMPYRDTM--SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNG 296
Query: 210 NYREGIDLFRKMRDSGVEV-NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ E + F++M G+ V N+ TLV+VLSACA LGA +LGKWVH + + +G
Sbjct: 297 CFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVG 356
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
AL DMY+KCG IE A+ VF+ + K++ TWNS+I GLA HGCG +A+ +F QM+++G K
Sbjct: 357 NALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEK 416
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD +T I VL +C+H GL+E+G F +M +Y + P ++HYGC+VDL RA LLD A E
Sbjct: 417 PDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIE 476
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
++ MPME +AV+W +LL AC N++LAE+A+++LI LEP N NYVL+SNIY
Sbjct: 477 FVKRMPMEADAVIWAALLGACRIYK---NIDLAELALQKLIVLEPKNPANYVLLSNIYGD 533
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
+W D +++ LM++ K PGCS+IE+ND V EF D RH S+EIY +L+ +
Sbjct: 534 LGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKL 593
Query: 509 LREECYAARM 518
LR Y M
Sbjct: 594 LRSFGYGPNM 603
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 198/394 (50%), Gaps = 26/394 (6%)
Query: 32 HHLPLLQKCTHLVQFKQVHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
H + LL+ C + ++V AQII F N ++ ++ S V Q+A+A +F+
Sbjct: 27 HFISLLRSCKTVALLQKVQAQIITHGFQYNGYVA----PNVVTSWVGLKQMAHARHLFDH 82
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQV 147
+P +N + RGY + L+ +M + P+ FT+P++LK+C G +
Sbjct: 83 FPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEG 142
Query: 148 KGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+ +H V+K + N + T LI Y + SA LF M E+N+V WT+MI+G++
Sbjct: 143 EEIHCEVIKGGLEGNQFVA--TTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYI 200
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN-KNCIILND 265
+ L R++ D E + + ++S +G + + + + + ++ + N
Sbjct: 201 LCNR----VALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNT 256
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
L YA G +E ++F+ + E+NV +WN +IGG A +GC E ++ F +M +
Sbjct: 257 MLNG-----YANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLID 311
Query: 326 G-IKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
G + P+D TL+ VL+AC+ G ++ GK + Y +K V + L+D+ + L+
Sbjct: 312 GLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGN--ALIDMYSKCGLI 369
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ A EV +M ++ + + W S++ A+ GA+
Sbjct: 370 ENAMEVFESMDLK-DLITWNSMICGLATHGCGAD 402
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 195/552 (35%), Positives = 293/552 (53%), Gaps = 83/552 (15%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVN-SSQIAYAHLVFNQIINP 94
LL C L KQVHA + K D I +L L+ S V+ + YA +F NP
Sbjct: 11 LLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKL--LLHSAVSVPDALDYARRLFLHFPNP 68
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP-DSFTYPILLKACGDLRQVKGVHSL 153
F NT+IRG AE+ + + +M P DSF++ LLKA R ++ L
Sbjct: 69 DVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQL 128
Query: 154 VVKSKDFNSVIHSL-------TRLITFY--CNF--------------------------- 177
++ ++H L T L++ Y C F
Sbjct: 129 HCQA-----IVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACF 183
Query: 178 --GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN------------------------- 210
GDVK A ++F++M +N+ +W M+ G+ K
Sbjct: 184 RCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVG 243
Query: 211 ------YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
+ E FR+++ G+ NE++L LSACA+ GA E GK +H F+ K+ +
Sbjct: 244 FAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWM 303
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLEK-NVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+ AL D Y+KCG + A VF+ + EK ++ +W S+I GLA+HG GEEA+++F +M+
Sbjct: 304 VSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEME 363
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
SGI+PD + I++L ACSHAGLIEKG E FY M+ Y +EP ++HYGC+VDL RA L
Sbjct: 364 ESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQL 423
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
D+AYE I +MP+ P A++W +LL AC+ NV+LAE ERL +L+P N G++VL+S
Sbjct: 424 DKAYEFIIHMPVLPTAIIWRTLLGACSIH---GNVKLAERVKERLSELDPNNSGDHVLLS 480
Query: 444 NIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
NIYA +W D +RR M ++ + K PG S+IE++ +++ F+ G+ ++ +EE Y L+
Sbjct: 481 NIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLK 540
Query: 504 YVAISLR-EECY 514
+ + LR E CY
Sbjct: 541 EIMLKLRVEGCY 552
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/525 (34%), Positives = 301/525 (57%), Gaps = 31/525 (5%)
Query: 19 NSHKNSNTATKSH-------HHLP------------LLQKCTHLVQFKQVHAQIIKASF- 58
+S ++ +TA+++H H LP L++ C+ Q+HA II+ S
Sbjct: 38 DSEESPSTASENHRRLQHQTHPLPKSRDESENQLISLIKSCSKKTHLLQIHAHIIRTSLI 97
Query: 59 DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQL 118
N IS L++ +L S + Y+ VF+QI+ PS +N +IR Y+ + +G L
Sbjct: 98 QNHFISLQFLSR--AALSPSRDMGYSSQVFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYL 155
Query: 119 YTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVIHSLTRLITFYC 175
Y +M G+ P+ + ++K+C + + G +H+ +++ + + LT L+ Y
Sbjct: 156 YREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHARILRDGHQSDNL-LLTTLMDLYS 214
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS--GVEVNELTL 233
+ A +FD++ + + V+W +I+ + + R+ + +F M+ + G E +++T
Sbjct: 215 CCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTC 274
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
+ +L ACANLGA E G+ VH ++ ++ L +L MY++CG +E+A +FK + E
Sbjct: 275 LLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDE 334
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
+NV +W+++I G A+HG G EA++ F QMQ G+ PDD TL VL+ACSH GL++ G
Sbjct: 335 RNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMF 394
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F M + + +EPN+ HYGC+VDLL RA LLD+AY++I +M ++P++ LW +LL AC
Sbjct: 395 FDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIH- 453
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
+ L E + LI+L+ G+YVL+ NIY++ WD +R+ MKE+ I +PGC
Sbjct: 454 --RHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGC 511
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
S IE+ VHEF+V D HP ++EIY ML+ + L+ Y A +
Sbjct: 512 STIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAEL 556
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/433 (38%), Positives = 269/433 (62%), Gaps = 17/433 (3%)
Query: 91 IINPS----TFAFNTVIRGYAEA---GLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
++ PS F NT+IR +A + L R + M+ + P+ FT+P LLKAC
Sbjct: 79 LLRPSVPLDAFLANTLIRAHATSPIHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACAA 138
Query: 144 LRQVKGV----HSLVVKSKDFNSVIHSLTRLITFYCNFGD--VKSAQLLFDQMTEKNVVT 197
L V H+ +K F + + LI Y FG + A+ +FD+M +++ VT
Sbjct: 139 LPGSPDVGLQAHAAALKF-GFATDQYVSNTLIHMYSCFGGGFLGDARNVFDRMPKESAVT 197
Query: 198 WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
W+AMI G+V+ + +DLFR+M+ +GV+ +E+T++ VL+A +LGA EL +WV FV
Sbjct: 198 WSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVE 257
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
+ I + L AL D AKCG ++ A+ VF+ + +++V +W S+I LA+ G G+EAV+
Sbjct: 258 REGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVR 317
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL 377
+F +M+++G+ PDDV I VLTACSHAG++++G F M+ +Y +EP ++HYGC+VD+
Sbjct: 318 VFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMF 377
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDG 437
RA +++ A E +R MP++PN V+W SL++AC + +EL E L+ P ++
Sbjct: 378 GRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAH---GRLELGESITRSLLHEYPAHEA 434
Query: 438 NYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEE 497
NY+++SN++A +W + ++RR M +R I K PGCS++E++ VHEF+ GD HP ++
Sbjct: 435 NYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKD 494
Query: 498 IYSMLEYVAISLR 510
IY M+E +A LR
Sbjct: 495 IYRMVEEMARELR 507
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 126/268 (47%), Gaps = 7/268 (2%)
Query: 48 QVHAQIIKASF-DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
Q HA +K F ++ +S+T + + S + A VF+++ S ++ +I GY
Sbjct: 148 QAHAAALKFGFATDQYVSNTLIH--MYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGY 205
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSL--VVKSKDFNSVI 164
GL + L+ +M NG+ D T +L A DL ++ + V+ + +
Sbjct: 206 VRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSV 265
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
LI GDV A +F+ M +++VV+WT++I+ + +E + +F +M+ +
Sbjct: 266 TLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVA 325
Query: 225 GVEVNELTLVSVLSACANLGASELG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
GV +++ + VL+AC++ G + G + + I + + DM+ + G +E
Sbjct: 326 GVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVER 385
Query: 284 ALRVFKIV-LEKNVCTWNSIIGGLAIHG 310
A+ + + ++ N W S++ HG
Sbjct: 386 AMEFVRTMPIQPNPVIWRSLVSACRAHG 413
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 306/573 (53%), Gaps = 83/573 (14%)
Query: 13 HFTNSA--NSHKNSNTATKSHHHLPLLQKC-THLVQFKQVHAQIIKASFDNRTI------ 63
++NS+ N+ N + HHL LL+ C T L + + QIIK + +
Sbjct: 743 QYSNSSYMNAFVNVRSLRVPSHHLRLLRDCSTSLSPYLPILKQIIKQCSTPKLLESALAA 802
Query: 64 ----SDTQLAKLIESLVNS----SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRG 115
S TQ L+ + + +++ A Q+ P+ F +N +I+G+ R
Sbjct: 803 MIKTSQTQNCYLMNQFITACSSFNRLDLAVSFMTQMQKPNVFVYNALIKGFVTCSHPIRS 862
Query: 116 IQLYTQMIGNGLDPDSFTYPILLK------------------------------------ 139
++ Y +M+ + + P S+TY L++
Sbjct: 863 LEFYVRMLRDSVSPSSYTYSSLVQASAFASGFGESLQAHIWKFGFGFHVQIQTTLIGFYS 922
Query: 140 ACGDLRQVKGVHSLVVKSKDF------------------NSVIHSLTR--------LITF 173
A G +R+ + V + + D NS+ + + LI
Sbjct: 923 ASGRIREARKVFDEMPERDDVTWTTMVSAYRQVLDMDSANSLANQMPEKNEATWNCLIDG 982
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y G+++ A+ LF+QM K++++WT MING+ + K YRE I +F KM + G+ +E+T+
Sbjct: 983 YTRLGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIAVFYKMMEEGIIPDEVTM 1042
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
+V+SACA+LG E+GK VH + +N +L+ +G+AL DMY+KCG +E AL VF + +
Sbjct: 1043 STVISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPK 1102
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
KN+ WNSII GLA HG +EA+KMF +M+M +KP+ VT ++V TAC+HAGL+E+G+ I
Sbjct: 1103 KNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRI 1162
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
+ +M DY + NV+HYGC+V L +A L+ EA E+I +M EPNAV+WG+LL C
Sbjct: 1163 YRSMIDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLDGCRIHK 1222
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK-NPG 472
N+E+AEIA +L+ LEP N G Y L+ ++YA + +W D ++R M+E I K PG
Sbjct: 1223 ---NLEIAEIAFNKLMILEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPG 1279
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
S I I+ H F D H S+E+ +L+ +
Sbjct: 1280 TSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 1312
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/526 (34%), Positives = 286/526 (54%), Gaps = 52/526 (9%)
Query: 26 TATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA--KLIESLVNSSQIAY 83
A++ HH P + H V K H ++ + L L+ N +A+
Sbjct: 147 AASEHEHHSPSGGEGVHCVALKWGH------------VAQSVLVGNALVHFYANHRSLAH 194
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDPDSFTYPILLKACG 142
A +F+++ + ++ T++ GYA GL +++ +M+ GL P+ T ++ A G
Sbjct: 195 ARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVSAMG 254
Query: 143 DL-------------------RQVKGVHSLVVKSKDFNSV--------------IHSLTR 169
+ R V ++L+ F ++S T
Sbjct: 255 QMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTT 314
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
++ Y GD++SA LFD M +N V+W+ MI + + E + LF+ M + GVE
Sbjct: 315 MVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPI 374
Query: 230 ELTLVSVLSACANLGASELGKWVHE-FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
LVSVLSACA LG +LG+W+++ +V +L LG A D+YAKCG + A ++F
Sbjct: 375 NAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLF 434
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
+ E+NV +WNS+I A+HG EE +++F Q++ + I PD++T + +L+ACSH+GL+
Sbjct: 435 AEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSGLVS 494
Query: 349 KGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+G+ F M+ Y +EP +HY C++DLL + LL+EA+EV + MPME + WG+LL A
Sbjct: 495 EGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAFEVAKGMPMETDEAGWGALLNA 554
Query: 409 CASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIV 468
C NVE+ E A ++L++L P + G YVLMS IYA+K +WD +R LM+ER +
Sbjct: 555 CRMY---GNVEIGEFAADKLVQLNPLDSGIYVLMSQIYASKNKWDQVKILRVLMRERGVK 611
Query: 469 KNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
KNPGCS IE++ HEF+V D H SE+IY+ L+ + L+ E Y
Sbjct: 612 KNPGCSSIEVDGKFHEFLVADVSHVHSEDIYAALKNIYFHLKWEGY 657
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 190/419 (45%), Gaps = 40/419 (9%)
Query: 30 SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
+H L LL+ C +F Q+HA + + ++L +L ++ +A +
Sbjct: 37 THPLLALLESCASFPRFLQLHALLTVSGLAAHRFPASRLLAFC-ALSTPPRVDHAAAILA 95
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ--- 146
+ P+ + T++R + A L R L+ ++I L D+ T +KA +
Sbjct: 96 RASAPNAYMLATMMRAFLRARLPSRASALFRRVIRESLPADARTLVFAIKAAASEHEHHS 155
Query: 147 ---VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
+GVH + +K + L+ FY N + A+ LFD+M +++VV+WT +++
Sbjct: 156 PSGGEGVHCVALKWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVD 215
Query: 204 GHVKQKNYREGIDLF-RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
G+ ++ E +F R + G++ NE+TLV+V+SA +G G+ V+ +V +
Sbjct: 216 GYARRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVG 275
Query: 263 LNDKLGAALTDM-------------------------------YAKCGYIEEALRVFKIV 291
+ L AL DM YAKCG +E A R+F +
Sbjct: 276 RSVNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDM 335
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
+N +W+ +I + EEAV++F M G++P + L++VL+AC+ G ++ G+
Sbjct: 336 PRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGR 395
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
I+ N K V +D+ + D A ++ M E N V W S++ A A
Sbjct: 396 WIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMA-ERNVVSWNSMIMAHA 453
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/507 (37%), Positives = 283/507 (55%), Gaps = 69/507 (13%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L QKCT+ KQ+HA +I N T S + + ++V S + YAH +F QI P
Sbjct: 19 LWQKCTNFRSLKQLHAFLIVNGL-NSTTSVLRELIFVSAIVVSGTMDYAHQLFAQISQPD 77
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA--------------- 140
F +NT+IRG A+ + LYTQM G+ PD FT+ +LKA
Sbjct: 78 IFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHG 137
Query: 141 -----------------------CGDLRQVKGVHS----------------------LVV 155
CGDL + + L V
Sbjct: 138 KVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKLDV 197
Query: 156 KSKDFNSV----IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
+ F+ + + S +IT Y G+++ A+ LFD++ +K+VVTW AMI G+V +
Sbjct: 198 ARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLN 257
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV-NKNCIILNDKLGAA 270
+E +++F MRD G +++T++S+LSA A+LG E+GK +H + + C L+ L A
Sbjct: 258 KEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNA 317
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMYAKCG I AL VF+ + +K+ +WNSIIGGLA+HG EE++ +F +M +KP+
Sbjct: 318 LIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPN 377
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
++T +AVL ACSHAG + +G+ F M+ +K+EPN+KHYGC+VD+L RA LL EA++ I
Sbjct: 378 EITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFI 437
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
M +EPNA++W +LL AC D VEL A E+L+K+ G+YVL+SNIYA++
Sbjct: 438 DTMEIEPNAIIWRTLLGACRVHGD---VELGRRANEQLLKMRKDESGDYVLLSNIYASQG 494
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIE 477
+WD K+R+LM + + K G S+I+
Sbjct: 495 EWDGVQKVRKLMDDGGVKKKVGHSLID 521
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 133/287 (46%), Gaps = 9/287 (3%)
Query: 130 DSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLI--TFYCNFGDVKSAQLLF 187
+ F L + C + R +K +H+ ++ + NS L LI + G + A LF
Sbjct: 12 NRFQQSSLWQKCTNFRSLKQLHAFLIVN-GLNSTTSVLRELIFVSAIVVSGTMDYAHQLF 70
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
Q+++ ++ W MI G + + L+ +M + GV ++ T VL AC L +
Sbjct: 71 AQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVK 130
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
LG +H V K+ N + L +A CG + A +F ++ V W+++ G A
Sbjct: 131 LGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYA 190
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
G + A ++F +M M D V+ ++TA + G +EK +++F + + V N
Sbjct: 191 RRGKLDVARQLFDEMPMK----DLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNA 246
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
G ++ L + L E ++ +R++ P+ V S+L+A A D
Sbjct: 247 MIAGYVLSRLNKEAL--EMFDAMRDLGQRPDDVTMLSILSASADLGD 291
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/515 (37%), Positives = 286/515 (55%), Gaps = 46/515 (8%)
Query: 32 HHLPLLQKCTHLVQFKQVHAQIIKASF--DNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
HHL L +C + + +++HAQ + + ++IS K+ S + A A +F+
Sbjct: 24 HHL--LTQCKTIRELQRIHAQALTHGLHPNQQSIS----CKIFRSYAEFGRPADAGRLFD 77
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQ 146
+I +P +F +++ + + + I +++ I +G PD F L A G D R
Sbjct: 78 EIPHPDIISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRI 137
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD------------------ 188
VH L+ + +S + L+ YC G + A+ +FD
Sbjct: 138 GSVVHGLIFRC-GLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYM 196
Query: 189 -------------QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
QM K+ V+WTA+I GHV+ K + ++LF KM G N +T+V
Sbjct: 197 KCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVG 256
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
VLSACA++GA +LG+ +H + +K+ N + AL DMYAK G I A VF+ V K+
Sbjct: 257 VLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKD 316
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
TW ++I + G G +AV++FW M SGI P+ VT ++VL+ACSHAGLI++G+E+F
Sbjct: 317 AFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFD 376
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
MR Y ++P ++HYGC+VDLL R LL+EA +I +M +EP+ V+W SLL+AC +
Sbjct: 377 KMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAH--- 433
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
N LAEIA + +IK EP +DG YVL+ N+YA +W +A MR+ M R I K PGCS
Sbjct: 434 GNDRLAEIAGKEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSW 493
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
IE++ VVHEF+V D H EIY LE +A L+
Sbjct: 494 IEVDGVVHEFLVEDKSHDARREIYVTLEIMARHLK 528
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 183/518 (35%), Positives = 292/518 (56%), Gaps = 48/518 (9%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
L+ C + H ++ + TQ+ + + ++ A VF QI P+
Sbjct: 17 LRTCATFRDLLRAHGLAVRLCLSQSSYVATQIVHICNAHGRAAHAA---RVFAQIPAPNL 73
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP--------DSFTYPILLKACGDL---R 145
N +I+ YA+ L +++Y +M+ P D FTYP LLKACG L R
Sbjct: 74 HLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLLKACGALAASR 133
Query: 146 QVKGVHSLVVKSK------DFNSVIHSLTR------------------------LITFYC 175
+ VH+ V +S NS+I TR LI+ +
Sbjct: 134 LGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVVSWNTLISAHA 193
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
G ++ A+ LF M +K VV+WTA+++G+ ++ +++FR M+ G E +++++V+
Sbjct: 194 RMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDDVSIVA 253
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
VL ACA LGA ELG+W++ + +K+ ++ + AL +MYAKCG IEEAL++F + EK+
Sbjct: 254 VLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQLFHGMSEKD 313
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIF 354
V +W++ IGGLA HG EAV++F M G + P+ +T + +L+ACSHAGL+++G
Sbjct: 314 VISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAGLVDEGLRYL 373
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
M+ DY VEP V+HYGC+VDLL R+ + A + IR MP+ P+ +WGSLL+AC S D
Sbjct: 374 DQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGSLLSACRSHGD 433
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
VE A +A ERL++LEP + GN V+++N+Y A +W + R+ ++ R+ K PGCS
Sbjct: 434 ---VETAVVAAERLVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIRSRSTRKTPGCS 490
Query: 475 VIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
+IE+++VV EF+ G P I ++L+ +A L ++
Sbjct: 491 MIEVDNVVREFVAGQDLGPELGGIATVLDILASKLADD 528
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 280/488 (57%), Gaps = 53/488 (10%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LL+ CT +QVHA+II+ +Q L SL N +Y VFN + +PS
Sbjct: 79 LLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSN---FSYTTSVFNGVSSPS 135
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHS 152
T +NT I+GY+E + L+ +M + PD FTYP L+KAC + VK H
Sbjct: 136 TVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHG 195
Query: 153 LVVK--------------------------SKDFNSV----IHSLTRLITFYCNFGDVKS 182
V+ K F+ + + S T +I Y +F D+
Sbjct: 196 SAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVE 255
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM----RD--------SG-VEVN 229
A+ LFD+M EKN V+W A+I+G+VK + R +F +M RD SG V+ +
Sbjct: 256 ARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSALISGNVKPD 315
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCI-ILNDKLGAALTDMYAKCGYIEEALRVF 288
E +VS++SAC+ +G+ EL KWV ++V K+ I + + AAL DM AKCG ++ A ++F
Sbjct: 316 EFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLF 375
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
+ + ++++ ++ S++ GL+IHGCG +AV +F +M G+ PDDV +LTACS AGL++
Sbjct: 376 EEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVD 435
Query: 349 KGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+G F +M+ DY + P+ HY C+VDLL RA L EAYE++++MP+EP+A WG+LL A
Sbjct: 436 EGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGA 495
Query: 409 CASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIV 468
C D +EL E+ ++L +LEP N GNYVL+SNIYAA QW D +R M+ER I
Sbjct: 496 CKLHCD---IELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIR 552
Query: 469 KNPGCSVI 476
K PGCS I
Sbjct: 553 KIPGCSWI 560
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/490 (37%), Positives = 286/490 (58%), Gaps = 17/490 (3%)
Query: 34 LPL-LQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
PL L+ C + F +++H ++IK + T L I+ I A+ +F
Sbjct: 168 FPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTL---IDVYSGGRAIGSAYKLFV 224
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG 149
++ + A+ ++I GY L +R + L ++ + D + I++ ++ +K
Sbjct: 225 GMLERNIVAWTSMISGYI---LCNR-VALARRLFDLAPERDVVLWNIMVSGYIEIGDMKA 280
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
L +++ S ++ Y N GDV++ + LF++M E+NV +W +I G+
Sbjct: 281 ARKLFDTMPYRDTM--SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNG 338
Query: 210 NYREGIDLFRKMRDSGVEV-NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ E + F++M G+ V N+ TLV+VLSACA LGA +LGKWVH + + +G
Sbjct: 339 CFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVG 398
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
AL DMY+KCG IE A+ VF+ + K++ TWNS+I GLA HGCG +A+ +F QM+++G K
Sbjct: 399 NALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEK 458
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD +T I VL +C+H GL+E+G F +M +Y + P ++HYGC+VDL RA LLD A E
Sbjct: 459 PDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIE 518
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
++ MPME +AV+W +LL AC N++LAE+A+++LI LEP N NYVL+SNIY
Sbjct: 519 FVKRMPMEADAVIWAALLGACRIYK---NIDLAELALQKLIVLEPKNPANYVLLSNIYGD 575
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
+W D +++ LM++ K PGCS+IE+ND V EF D RH S+EIY +L+ +
Sbjct: 576 LGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKL 635
Query: 509 LREECYAARM 518
LR Y M
Sbjct: 636 LRSFGYEPNM 645
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 210/424 (49%), Gaps = 35/424 (8%)
Query: 11 LTHFTNSA--NSHKNSNTATKSH-------HHLPLLQKCTHLVQFKQVHAQIIKASFD-N 60
LT ++ A N+ +T T+ H H + LL+ C + ++V AQII F N
Sbjct: 39 LTFYSEWARNNTFFIDDTLTQKHPRWVLEEHFISLLRSCKTVALLQKVQAQIITHGFQYN 98
Query: 61 RTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYT 120
++ ++ S V Q+A+A +F+ +P +N + RGY + L+
Sbjct: 99 GYVA----PNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFG 154
Query: 121 QMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCN 176
+M + P+ FT+P++LK+C G + + +H V+K + N + T LI Y
Sbjct: 155 KMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVA--TTLIDVYSG 212
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
+ SA LF M E+N+V WT+MI+G++ + L R++ D E + + +
Sbjct: 213 GRAIGSAYKLFVGMLERNIVAWTSMISGYILCNR----VALARRLFDLAPERDVVLWNIM 268
Query: 237 LSACANLGASELGKWVHEFVN-KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
+S +G + + + + + ++ + N L YA G +E ++F+ + E+N
Sbjct: 269 VSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNG-----YANNGDVEACEQLFEEMPERN 323
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEI- 353
V +WN +IGG A +GC E ++ F +M + G + P+D TL+ VL+AC+ G ++ GK +
Sbjct: 324 VFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVH 383
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
Y +K V + L+D+ + L++ A EV +M ++ + + W S++ A+
Sbjct: 384 VYAATIGFKGSIYVGN--ALIDMYSKCGLIENAMEVFESMDLK-DLITWNSMICGLATHG 440
Query: 414 DGAN 417
GA+
Sbjct: 441 CGAD 444
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/503 (38%), Positives = 280/503 (55%), Gaps = 48/503 (9%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQ+HA ++ D + L++ L+ + YA +F+ N TF +N +I+ Y
Sbjct: 5 KQLHAHCLRTGVD-------ETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAY 57
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVVKSKDFNSV 163
H I LY + +GL P T+ + A R ++ +HS +S F S
Sbjct: 58 YVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRS-GFESD 116
Query: 164 IHSLTRLITFYCNFG-------------------------------DVKSAQLLFDQMTE 192
T LIT Y G D+K+A LFD M
Sbjct: 117 SFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPR 176
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKW 251
KNV +WT +I+G + NY E + +F M +D V+ N +T+VSVL ACANLG E+G+
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHG 310
+ + +N N + A +MY+KCG I+ A R+F+ + ++N+C+WNS+IG LA HG
Sbjct: 237 LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
+EA+ +F QM G KPD VT + +L AC H G++ KG+E+F +M +K+ P ++HY
Sbjct: 297 KHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY 356
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
GC++DLL R L EAY++I+ MPM+P+AV+WG+LL AC+ NVE+AEIA E L K
Sbjct: 357 GCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFH---GNVEIAEIASEALFK 413
Query: 431 LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS-VIEINDVVHEFMVGD 489
LEP N GN V+MSNIYAA +WD +MR+LMK+ + K G S +E+ VH+F V D
Sbjct: 414 LEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVED 473
Query: 490 GRHPCSEEIYSMLEYVAISLREE 512
HP S EIY +LE + ++ E
Sbjct: 474 KSHPRSYEIYQVLEEIFRRMKLE 496
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/528 (34%), Positives = 295/528 (55%), Gaps = 49/528 (9%)
Query: 24 SNTATKSHHHLPLLQKCTHLVQFKQV------HAQIIKASFDNRTISDTQLAKLIESLVN 77
S++A H P L K +Q++ H Q + S D ++ +
Sbjct: 114 SSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAG-----VHFWSV 168
Query: 78 SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI--GNGLDPDSFTYP 135
S + A +F++ ++NT+I GY +GL ++L+ +++ G + PD T
Sbjct: 169 SGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMI 228
Query: 136 ILLKAC---GDLRQVKGVHSLV------------------------------VKSKDFNS 162
+ C GDL K +H V V + N
Sbjct: 229 GAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNK 288
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ S T +I + G ++ A++LFD+M E++V W A++ G+V+ K +E I LF +M+
Sbjct: 289 TVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQ 348
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+S V+ NE+T+V++LSAC+ LGA E+G WVH +++++ + L+ LG +L DMYAKCG I+
Sbjct: 349 ESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIK 408
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+A+ +FK + +KN TW ++I GLA HG +EA++ F +M G++PD++T I VL+AC
Sbjct: 409 KAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACC 468
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
HAGL+++G++ F M Y +E +KHY C++DLL RA LDEA +++ MPM+P+AV+W
Sbjct: 469 HAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVW 528
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+L AC N+ L E A +L++L+P + G YVL++N+YA A K+R +M
Sbjct: 529 GALFFACRMH---GNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMM 585
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+ + K PGCS IE+N VVHEF+V D H + IY L + + ++
Sbjct: 586 RHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTIAIYDCLHGITLQMK 633
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/508 (34%), Positives = 282/508 (55%), Gaps = 44/508 (8%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LL C + ++HA ++A D D +L + + S ++ A + + +P+
Sbjct: 36 LLAGCASARRASELHAAAVRAGVDQDKAVDFRLQR---AYAASGRLDLAVALLRRTPDPT 92
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDPDSFTYPILLKACGDLRQVKGVHSLV 154
+ + I ++ GL H + L ++M+ +GL P + T L ACG L + +H
Sbjct: 93 AVFYTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHTLSASLPACGGLAVGRALHGYA 152
Query: 155 VK-------------------------------SKDFNSVIHSLTRLITFYCNFGDVKSA 183
VK + + S+T ++T Y G + A
Sbjct: 153 VKLALSGEPYVATALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGLLDDA 212
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
+ LFD + K+++ W AM++G+ + E + LFR+M SGVE +E+++V LSA A L
Sbjct: 213 RSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQL 272
Query: 244 GASELGKWVHEFVNKNC---IILNDKLGAALTDMYAKCGYIEEALRVFKIVL--EKNVCT 298
G +E G+W+H FV + + LN ++G AL DMY KCG +E+A+ VF + ++++
Sbjct: 273 GTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVA 332
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
WN+++ G A+HG EA+ F Q++ G+ P D+T I VL ACSH+GL+++G+E+F +M
Sbjct: 333 WNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMA 392
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP-MEPNAVLWGSLLTACASADDGAN 417
+Y +EP V+HYGC+VDLL RA ++EA+E++++M +P+AV+W SLL AC N
Sbjct: 393 EEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASLLAACRLHK---N 449
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
+EL + + L+ N G YVL+SN+YAA W + G++R +M+ I K PGCS +E
Sbjct: 450 MELGQRIADHLVANGLANSGTYVLLSNMYAAAGNWREVGRVRAMMRASGIQKEPGCSAVE 509
Query: 478 INDVVHEFMVGDGRHPCSEEIYSMLEYV 505
+ V EF+ GD HP + EIY+ LE V
Sbjct: 510 VGRRVVEFVAGDRSHPRAAEIYAKLEEV 537
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 183/514 (35%), Positives = 302/514 (58%), Gaps = 45/514 (8%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q ++V I+K D + + LI+ S + A +F+++ + ++N +I
Sbjct: 261 QGEKVRGFIVKTGMD---LDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMIS 317
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLD-PDSFTYPILLKACGDLRQVK---GVHSLVVKSKDF 160
GY I + +M G + PD T L AC L+ ++ +H+ V K F
Sbjct: 318 GYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGF 377
Query: 161 NSVIHS-----------------------------LTRLITFYCNFGDVKSAQLLFDQMT 191
+ I + T +I+ Y N GD++ A+ LFD+
Sbjct: 378 TTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSP 437
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
++VV WTAMING+V+ ++ + + LFR+M+ V+ ++ T+V++L+ CA LGA E GKW
Sbjct: 438 VRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKW 497
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+H ++++N I ++ +G AL +MY+KCG ++++L +F + +K+ +W SII GLA++G
Sbjct: 498 IHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGK 557
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
EA+++F +M+ G KPDD+T I VL+ACSH GL+E+G+ F +M++ +++EP V+HYG
Sbjct: 558 TSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYG 617
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAV---LWGSLLTACASADDGANVELAEIAMERL 428
C++DLL RA LLDEA E+I+ +P+E + L+G+LL+AC + NV++ E ++L
Sbjct: 618 CVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHN---NVDMGERLAKKL 674
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
+E + + L++NIYA+ +W+DA K+RR MKE + K PGCS+IE++ +VHEF+VG
Sbjct: 675 ENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVG 734
Query: 489 DGRHPCSEEIYSMLEYVA---ISLREECYAARMP 519
D HP EI SML V + L+E + MP
Sbjct: 735 DPSHPEMMEICSMLNRVTGQLLGLKESQVESVMP 768
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/434 (30%), Positives = 227/434 (52%), Gaps = 54/434 (12%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSS--QIAYAHLVFNQIINP 94
L+ C + Q KQ+ +QI + + DT + KL+ +SS + YA +FN + +P
Sbjct: 150 LRNCKSMDQLKQIQSQIFRIGLEGD--RDT-INKLMAFCADSSLGNLRYAEKIFNYVQDP 206
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVH 151
S F +N +++ YA+ G+ + + L+ Q+ +GL PD FTYP +LKA G D+RQ + V
Sbjct: 207 SLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVR 266
Query: 152 SLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
+VK+ D ++ +++ LI Y +V++A+ LFD+MT ++ V+W MI+G+V+ +
Sbjct: 267 GFIVKTGMDLDNYVYN--SLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRR 324
Query: 211 YREGIDLFRKMRDSGVE-VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ + I+ FR+M+ G E +E T+VS LSAC L ELG +H +V K + ++
Sbjct: 325 FEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTRIDN 383
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG----------------- 312
AL DMYAKCG + A +F + KNV W S+I G CG
Sbjct: 384 ALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYI--NCGDLREARDLFDKSPVRDV 441
Query: 313 ----------------EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
++AV +F +MQ+ +KPD T++ +LT C+ G +E+GK I +
Sbjct: 442 VLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWI-HG 500
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
+ ++ +V L+++ + +D++ E+ + + + W S++ C A +G
Sbjct: 501 YLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELE-DKDTASWTSII--CGLAMNGK 557
Query: 417 NVELAEI--AMERL 428
E + MER+
Sbjct: 558 TSEALRLFSEMERV 571
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/512 (34%), Positives = 290/512 (56%), Gaps = 40/512 (7%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+P C+ + + KQ H+ +++ + +++ SL I YA +F + N
Sbjct: 6 VPPPWACSSMAEVKQQHSLLLRLGLSTNNHAMSRIFTFC-SLSKHGDINYALKLFTTLPN 64
Query: 94 PSTFAFNTVIRGY-AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHS 152
P TF +NT+ + + + + + Y+ M+ + + P++FT+P L++AC + K +H+
Sbjct: 65 PDTFLYNTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRACKLEEEAKQLHA 124
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH------- 205
V+K F ++L LI Y FG + A+ +F M++ NVV+WT++++G+
Sbjct: 125 HVLKF-GFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVD 183
Query: 206 -------------------------VKQKNYREGIDLFRKMR-DSGVEVNELTLVSVLSA 239
VK +RE LFR+MR + +E++ ++LSA
Sbjct: 184 EAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSA 243
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
C +GA E G W+H++V K I+L+ KL + DMY KCG +++A VF + K V +W
Sbjct: 244 CTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSW 303
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
N +IGG A+HG GE+A+++F +M+ + PD +T + VLTAC+H+GL+E+G F M
Sbjct: 304 NCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMV 363
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
+ ++P +HYGC+VDLL RA L+EA +VI MPM P+A + G+LL AC N+
Sbjct: 364 DVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIH---GNL 420
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
EL E R+I+L+P N G YV++ N+YA+ +W+ +R+LM +R + K PG S+IE+
Sbjct: 421 ELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEM 480
Query: 479 NDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
VV+EF+ G HP +E IY+ + + S+R
Sbjct: 481 EGVVNEFVAGGRDHPLAEAIYAKIYEMLESIR 512
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 172/447 (38%), Positives = 262/447 (58%), Gaps = 20/447 (4%)
Query: 72 IESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS 131
I + ++ A VF++ ++N +I GY + G G + I++Y M G+ PD
Sbjct: 123 IHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDD 182
Query: 132 FTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL--- 185
T L+ +C GDL + K + VK+ I L+ + GD+ A+
Sbjct: 183 VTMIGLVSSCAMLGDLNRGKEFYE-YVKANGLRMTIPLANALMDMFSKCGDIHEARRIFD 241
Query: 186 ----------LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
LFD M EK+VV W AMI G V+ K ++ + LF++M+ S + +E+T++
Sbjct: 242 NLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIH 301
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
LSAC+ LGA ++G W+H ++ K+ + LN LG +L DMYAKCG I EAL VF + +N
Sbjct: 302 CLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQTRN 361
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
T+ +IIGGLA+HG A+ F +M +GI PD++T I +L+AC H G+I+ G++ F
Sbjct: 362 SLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFS 421
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
M+ + + P +KHY +VDLL RA LL+EA +++ +MPME +A +WG+LL C
Sbjct: 422 QMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLFGCRMH--- 478
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
NV+L E A ++L++L+P + G YVL+ +Y W+DA + RR+M ER + K PGCS
Sbjct: 479 GNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSS 538
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSML 502
IE+N +V EF+V D P SE+IY L
Sbjct: 539 IEVNGIVSEFIVRDKSRPESEKIYDCL 565
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 176/331 (53%), Gaps = 19/331 (5%)
Query: 74 SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL---DPD 130
+L S + Y + I NP+ F++N IRG++E+ + Y QM+ G PD
Sbjct: 21 ALSESRYLNYCVKILKGIENPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPD 80
Query: 131 SFTYPILLKACGDLRQVKGVHSLV--VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
FTYP+L K C DLR H ++ V V H I + + G++++A+ +FD
Sbjct: 81 HFTYPVLFKVCADLRLNSLGHMILGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFD 140
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
+ +++V+W +ING+ K + I++++ M GV+ +++T++ ++S+CA LG
Sbjct: 141 ESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNR 200
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-----KIVL--------EKN 295
GK +E+V N + + L AL DM++KCG I EA R+F + ++ EK+
Sbjct: 201 GKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKD 260
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
V WN++IGG ++A+ +F +MQ S PD++T+I L+ACS G ++ G I
Sbjct: 261 VVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHR 320
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
+ + + + NV LVD+ + + EA
Sbjct: 321 YIEK-HSLSLNVALGTSLVDMYAKCGNISEA 350
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 15/219 (6%)
Query: 22 KNSNTATKSHHHLPLLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNS 78
+ SNT + L C+ L +H I K S T L + N
Sbjct: 288 QTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGNI 347
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
S+ A VF+ I ++ + +I G A G I + +MI G+ PD T+ LL
Sbjct: 348 SE---ALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLL 404
Query: 139 KAC--GDLRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKN 194
AC G + Q + +KS+ + N + + ++ G ++ A L + M E +
Sbjct: 405 SACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEAD 464
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKM-----RDSGVEV 228
W A++ G N + G +K+ DSG+ V
Sbjct: 465 AAVWGALLFGCRMHGNVKLGEKAAKKLLELDPSDSGIYV 503
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 198/549 (36%), Positives = 300/549 (54%), Gaps = 72/549 (13%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF----- 88
+ LLQ T L Q Q+HA IIK S D +L + + + +++ + YA VF
Sbjct: 7 MSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPS 66
Query: 89 ------NQII-------NP------------------STFAFNTVIRGYAEAGLGHRGIQ 117
N +I NP +++ + VI+ G +
Sbjct: 67 PDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQK 126
Query: 118 LYTQM--IGNGLD-----------------------------PDSFTYPILLKACGDLRQ 146
L+TQ+ IG G D PD Y +LL + +
Sbjct: 127 LHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGE 186
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+ H L + + + V S +I + + GDV +A+ LFD+ E+++++W++MI +
Sbjct: 187 INLAHDLFDRMPERDLV--SWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYA 244
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
K + E + LF +M+ + V +++T+VSVLSAC ++GA +GK +HE + +N I ++ K
Sbjct: 245 KARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLK 304
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
LG +L DMYAKCG I+ +LRVF + ++V W+++I GLA HG GE A+ F +M
Sbjct: 305 LGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISED 364
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
IKP+DVT I VL+ACSH GL+++G F +M + Y V P ++HYGC+VD+L RA L EA
Sbjct: 365 IKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEA 424
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
E+I++MP P+A++W +LL AC NVE+AE A L++LEP DGNYVL+SNIY
Sbjct: 425 MELIKSMPFAPDAIVWRALLGACRIY---KNVEIAEEATVNLLELEPHVDGNYVLLSNIY 481
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
+ +WD +RR+MK NI K PG S IE+++ VHEF+ GD HP S++I ML +
Sbjct: 482 SQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEIT 541
Query: 507 ISLREECYA 515
L+ YA
Sbjct: 542 ARLKANGYA 550
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/462 (38%), Positives = 275/462 (59%), Gaps = 36/462 (7%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
+FN++ +++ +I Y + + + L+ +M NG+ D +L AC L
Sbjct: 245 LFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLV 304
Query: 147 V---KGVHSLVVKS------KDFNSVIH------------------------SLTRLITF 173
V K VH LVVK N++IH S +I+
Sbjct: 305 VITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISG 364
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y G+++ A+ LFD M +K+ V+W+AMI+G+ +Q + E + LF++M+ G + +E L
Sbjct: 365 YVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETIL 424
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
VSV+SAC +L A + GKW+H ++ KN + +N LG L +MY K G +E+AL VFK + E
Sbjct: 425 VSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEE 484
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K V TWN++I GLA++G ++++K F +M+ G+ P+++T +AVL AC H GL+++G
Sbjct: 485 KGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRH 544
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F +M +++K+ PN+KHYGC+VDLL RA +L EA E+I +MPM P+ WG+LL AC
Sbjct: 545 FNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYG 604
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
D E E +L++L P +DG VL+SNIYA+K W D ++R +M++ +VK PGC
Sbjct: 605 DN---ETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGC 661
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
S+IE + VHEF+ GD HP +E I ML+ +A L+ E YA
Sbjct: 662 SMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYA 703
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 220/471 (46%), Gaps = 102/471 (21%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL--VNSSQIAYAHLVFNQIINP 94
LQKC ++ QF Q+ +Q+I + F + + ++L K L +N +Q ++ +F+ I NP
Sbjct: 33 LQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQ---SYQIFSHIENP 89
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA-------------- 140
+ F NT+++GY + + I +Y M+ + + D++TYPIL ++
Sbjct: 90 NGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQ 149
Query: 141 ------------------------CGDLRQVKGVH--SLVVKSKDFNSVIHSLT------ 168
CG+L + V S V+ +NS++
Sbjct: 150 DHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVE 209
Query: 169 ------------------RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
+I + G+V+ A LF++M +K++V+W+A+I+ + + +
Sbjct: 210 EAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEM 269
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
Y E + LF++M +G+ V+E+ ++SVLSAC+ L GK VH V K I L A
Sbjct: 270 YEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNA 329
Query: 271 LTDMYA-------------------------------KCGYIEEALRVFKIVLEKNVCTW 299
L MY+ KCG IE+A +F + +K+ +W
Sbjct: 330 LIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSW 389
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
+++I G A E + +F +MQ+ G KPD+ L++V++AC+H +++GK I +R+
Sbjct: 390 SAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRK 449
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ ++ N+ L+++ + +++A EV + + E W +L+ A
Sbjct: 450 N-GLKINIILGTTLINMYMKLGCVEDALEVFKGLE-EKGVSTWNALILGLA 498
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 6/253 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I V +I A +F+ + + +++ +I GYA+ + L+ +M G PD
Sbjct: 361 MISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPD 420
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
++ AC L Q K +H+ + K+ ++I T LI Y G V+ A +F
Sbjct: 421 ETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILG-TTLINMYMKLGCVEDALEVF 479
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+ EK V TW A+I G + + F +M++ GV NE+T V+VL AC ++G +
Sbjct: 480 KGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVD 539
Query: 248 LG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGG 305
G + + + ++ I N K + D+ + G ++EA + + + + +V TW +++G
Sbjct: 540 EGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGA 599
Query: 306 LAIHGCGEEAVKM 318
+G E ++
Sbjct: 600 CKKYGDNETGERI 612
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 134/288 (46%), Gaps = 18/288 (6%)
Query: 131 SFTYPIL---LKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN--FGDVKSAQL 185
+ T PIL L+ C +++Q + S ++ S F + +RL+ F F ++ +
Sbjct: 23 TLTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSF-AASRLLKFSTELPFININQSYQ 81
Query: 186 LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA 245
+F + N M+ G++++ + + I +++ M +S V + T + +C+ A
Sbjct: 82 IFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLA 141
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
GK + + V K + + L +MYA CG + +A +VF ++ +WNS++ G
Sbjct: 142 EFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAG 201
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
+ G EEA ++ +M + + +++ G +E+ ++F M+ +
Sbjct: 202 YVLVGNVEEAKDVYDRMPERNVIASN----SMIVLFGKKGNVEEACKLFNEMK-----QK 252
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNM---PMEPNAVLWGSLLTACA 410
++ + L+ + + +EA + + M + + V+ S+L+AC+
Sbjct: 253 DLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACS 300
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 184/496 (37%), Positives = 289/496 (58%), Gaps = 12/496 (2%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
N+ + H L L K L+Q K HAQI+ ++ L I +
Sbjct: 60 NATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNIL---INMYSKCGSVD 116
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG 142
+A VF+++ + S ++NT+I + G + + L QM G FT +L AC
Sbjct: 117 FARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACA 176
Query: 143 D---LRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
L + + +H+ +K+ D N + T L+ Y G +K A +F+ M +++VVTW
Sbjct: 177 AKCALSECQLLHAFAIKAAMDLNVFV--ATALLDVYAKCGLMKDAVCVFESMPDRSVVTW 234
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
++M G+V+ + Y + + LFRK ++G++ ++ + SV+ ACA L A GK V+ ++K
Sbjct: 235 SSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSK 294
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+ N + ++L DMYAKCG IEE+ +VF+ V ++NV WN++I GL+ H E + +
Sbjct: 295 SGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMIL 354
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
F +MQ G+ P+DVT ++VL+AC H GL++KG++ F M +++ + PNV HY C+VD L
Sbjct: 355 FEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLS 414
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGN 438
RA + EAY++I +P +A +WGSLL +C + N+ELAE+A ++L +EP N GN
Sbjct: 415 RAGQIFEAYDLISKLPFNASASMWGSLLASCRTH---GNLELAEVAAKKLFDIEPHNSGN 471
Query: 439 YVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
Y+L+SN+YAA +WD+ KMR+L+KE ++ K G S IEI D VH FMVG+ HP EI
Sbjct: 472 YLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEI 531
Query: 499 YSMLEYVAISLREECY 514
YS L V L++ Y
Sbjct: 532 YSKLNEVMDELQKLGY 547
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 187/485 (38%), Positives = 273/485 (56%), Gaps = 20/485 (4%)
Query: 36 LLQKCTHLVQFKQ---VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L+ C + K+ VH +IK+ F T L I+ + I A+ VF ++I
Sbjct: 57 ILKSCVKINALKEGEEVHCFVIKSGFRANPFVATTL---IDMYASGGAIHAAYRVFGEMI 113
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP--DSFTYPILLKACGDLRQVKGV 150
+ A+ +I GY L T L P D + ++ + + V
Sbjct: 114 ERNVIAWTAMINGYITC------CDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRA 167
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
L K N + S ++ Y + GDV + + LF++M E+NV +W A+I G+ +
Sbjct: 168 RELFDKMP--NKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGC 225
Query: 211 YREGIDLFRKMRDSGVEV-NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ E + F++M G V N+ TLV+VLSACA LGA +LGKWVH + + N +
Sbjct: 226 FSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRN 285
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG +E AL VFK + K++ +WN+IIGGLA+HG G +A+ +F M+++G P
Sbjct: 286 ALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENP 345
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D +T I +L AC+H GL+E G F +M DY + P ++HYGC+VDLL RA LL A +
Sbjct: 346 DGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDF 405
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
IR MP+E +AV+W +LL AC NVELAE+A+E+LI+ EP N NYV++SNIY
Sbjct: 406 IRKMPIEADAVIWAALLGACRVY---KNVELAELALEKLIEFEPKNPANYVMLSNIYGDF 462
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+W D +++ M++ K PGCS+IE+ND + EF D RHP E+IY L + L
Sbjct: 463 GRWKDVARLKVAMRDTGFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKLL 522
Query: 510 REECY 514
R Y
Sbjct: 523 RSSGY 527
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 174/339 (51%), Gaps = 17/339 (5%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-- 141
AH VF+QI P+ +N + RGY++ I L+ QM G + P+ FT+P++LK+C
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVK 63
Query: 142 -GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
L++ + VH V+KS F + T LI Y + G + +A +F +M E+NV+ WTA
Sbjct: 64 INALKEGEEVHCFVIKSG-FRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTA 122
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
MING++ + LF + + + + + A + A EL + NK+
Sbjct: 123 MINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRAREL---FDKMPNKDV 179
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ N L YA G + R+F+ + E+NV +WN++IGG +GC E + F
Sbjct: 180 MSWNTVLNG-----YASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFK 234
Query: 321 QMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYGCLVDLLC 378
+M + G + P+D TL+ VL+AC+ G ++ GK + Y YK NV L+D+
Sbjct: 235 RMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYK--GNVYVRNALMDMYA 292
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ +++ A +V ++M + + W +++ A GA+
Sbjct: 293 KCGVVETALDVFKSMD-NKDLISWNTIIGGLAVHGHGAD 330
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 9/234 (3%)
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
+++A +FDQ+ E N W AM G+ + +++++ I LFR+M+ V N T +L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
C + A + G+ VH FV K+ N + L DMYA G I A RVF ++E+NV W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
++I G I C + + + + D V +++ A + + +E+F M
Sbjct: 121 TAMINGY-ITCCDLVTARRLFDL---APERDIVLWNTMISGYIEAKDVIRARELFDKMPN 176
Query: 360 DYKVEPN--VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
+ N + Y D++ RL +E E RN+ NA++ G C S
Sbjct: 177 KDVMSWNTVLNGYASNGDVMACERLFEEMPE--RNV-FSWNALIGGYTRNGCFS 227
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 184/504 (36%), Positives = 285/504 (56%), Gaps = 42/504 (8%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LLQ C + + +Q+HAQ I + R +L++S V+ SQI YA LVFN+I +P
Sbjct: 31 LLQMCHNFQEVRQIHAQFIVSGLLARP---PNAGRLLDSYVSMSQIYYALLVFNRIPSPD 87
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHS 152
FA+N +IRG + + LY +++ GL PD++TY +LK C L+ + K VH
Sbjct: 88 VFAYNAMIRGLTLGNCPYDSLLLYNKLLLGGLTPDNYTYTFVLKVCSHLKAIFEGKQVHC 147
Query: 153 LVVK------SKDFNSVIH------------------------SLTRLITFYCNFGDVKS 182
V+K + S+IH ++ +I+ Y + G V+
Sbjct: 148 QVIKAGVAPDTHIHTSLIHMYAKSDCLACAEGVLAECSQENVLAINSMISGYMSQGHVEK 207
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM---RDSGVEVNELTLVSVLSA 239
A+ +FD+M K+ TW+ MI G+ K + E + +FR+M +SGV+ NE LVS LSA
Sbjct: 208 ARAMFDKMGAKDAATWSGMITGYTKNGMHEEALVMFREMMMVSNSGVQPNESALVSSLSA 267
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
A LGA + G+W+H ++ + ++ LG L DMYAKCG I + ++F+ + +++V TW
Sbjct: 268 TACLGALDQGRWIHAYIRRIGAKISITLGTGLVDMYAKCGSIHCSYKLFREMQQRDVVTW 327
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
++ G A+HG + ++F +M G +P++V +A+L+ACSHAG +E G F M
Sbjct: 328 GVMMSGFAMHGQARKCFQLFDEMVAGGTRPNEVIFVAILSACSHAGYLELGHHYFNQMVT 387
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
D+ + P+V+HYGC+VDLL RA L EA E+I +MP EP AV+WG+LL+AC D +
Sbjct: 388 DFGIRPSVEHYGCMVDLLGRAGQLAEAEELIISMPEEPTAVIWGALLSACRIHKD---LR 444
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
A +L++LEP Y L ++++ + ++A + R +KE + G S IEIN
Sbjct: 445 RGRRAFRQLMQLEPLRGDRYKLAGQMFSSAGEKEEADNVTRFIKENELETTRGSSFIEIN 504
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLE 503
VVHEF+VGD H + E+Y M E
Sbjct: 505 GVVHEFVVGDADHHKAREMYRMWE 528
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 140/309 (45%), Gaps = 37/309 (11%)
Query: 136 ILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
ILL+ C + ++V+ +H+ + S ++ RL+ Y + + A L+F+++ +V
Sbjct: 30 ILLQMCHNFQEVRQIHAQFIVSGLLARPPNA-GRLLDSYVSMSQIYYALLVFNRIPSPDV 88
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
+ AMI G + + L+ K+ G+ + T VL C++L A GK VH
Sbjct: 89 FAYNAMIRGLTLGNCPYDSLLLYNKLLLGGLTPDNYTYTFVLKVCSHLKAIFEGKQVHCQ 148
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG----------- 304
V K + + + +L MYAK + A V ++NV NS+I
Sbjct: 149 VIKAGVAPDTHIHTSLIHMYAKSDCLACAEGVLAECSQENVLAINSMISGYMSQGHVEKA 208
Query: 305 --------------------GLAIHGCGEEAVKMFWQMQM---SGIKPDDVTLIAVLTAC 341
G +G EEA+ MF +M M SG++P++ L++ L+A
Sbjct: 209 RAMFDKMGAKDAATWSGMITGYTKNGMHEEALVMFREMMMVSNSGVQPNESALVSSLSAT 268
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
+ G +++G+ I +RR + ++ LVD+ + + +Y++ R M + + V
Sbjct: 269 ACLGALDQGRWIHAYIRR-IGAKISITLGTGLVDMYAKCGSIHCSYKLFREM-QQRDVVT 326
Query: 402 WGSLLTACA 410
WG +++ A
Sbjct: 327 WGVMMSGFA 335
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 285/475 (60%), Gaps = 12/475 (2%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
+FKQVHAQ++K ++N + +A +L + + YA +F QI P TF FNT+IR
Sbjct: 3 EFKQVHAQVLK--WENSFCASNLVATC--ALSDWGSMDYACSIFRQIDQPGTFEFNTMIR 58
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFN 161
GY + LY +M+ G++ D+FTYP L KAC LR ++ +H + K +
Sbjct: 59 GYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFK-RGLE 117
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
+ LI Y G ++ + +F+ M ++V +W+A+I H + E + +F +M
Sbjct: 118 GDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEM 177
Query: 222 -RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
R+ E LVSVLSAC +LGA +LG+ H + +N +N + +L DMY KCG
Sbjct: 178 SREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGC 237
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
IE+ L +F+ +++KN +++ +I GLA+HG G EA+++F M G+KPDDV + VL+A
Sbjct: 238 IEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSA 297
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
C+HAGL+++G + F M+ ++ +EP ++HYGC+V L+ RA +L++A E IR+MP++PN V
Sbjct: 298 CNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEV 357
Query: 401 LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRR 460
+W LL+AC N+E+ EIA + L +L N G+YV++SN+YA +W+D K+R
Sbjct: 358 VWRGLLSACKFHH---NLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRT 414
Query: 461 LMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
M + + PG S++++ +++F+ D HP + +Y M+ + L+ E Y+
Sbjct: 415 EMARKGFTQTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGYS 469
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 277/500 (55%), Gaps = 13/500 (2%)
Query: 18 ANSHKNSNTATKSHHHLPLLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIES 74
A H N S H P L K ++ Q HA I+K D+ L I
Sbjct: 91 AYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSL---ISG 147
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
+S +A +F+ + + +I G+ G + + +M G+ + T
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTV 207
Query: 135 PILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
+LKA G D+R + VH L +++ + + L+ Y AQ +FD+M
Sbjct: 208 VSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+NVVTWTA+I G+V+ + + +G+ +F +M S V NE TL SVLSACA++GA G+
Sbjct: 268 SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRR 327
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
VH ++ KN I +N G L D+Y KCG +EEA+ VF+ + EKNV TW ++I G A HG
Sbjct: 328 VHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGY 387
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
+A +F+ M S + P++VT +AVL+AC+H GL+E+G+ +F +M+ + +EP HY
Sbjct: 388 ARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYA 447
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VDL R LL+EA +I MPMEP V+WG+L +C D EL + A R+IKL
Sbjct: 448 CMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKD---YELGKYAASRVIKL 504
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
+P + G Y L++N+Y+ WD+ ++R+ MK++ +VK+PG S IE+ + EF+ D +
Sbjct: 505 QPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDK 564
Query: 492 HPC-SEEIYSMLEYVAISLR 510
P S+++Y L+ V + +R
Sbjct: 565 KPLESDDLYKTLDTVGVQMR 584
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 179/470 (38%), Positives = 271/470 (57%), Gaps = 42/470 (8%)
Query: 32 HHLP---LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF 88
HH P LL T + KQ+HA ++K N +S L+++ +S +YA L+F
Sbjct: 14 HHRPSTHLLHNFTSPFELKQLHAHLLKT---NSPLSSLPLSRVASVCAFNSSFSYAKLIF 70
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLR 145
+ +NT +R +AE I L+ ++ + PD +T +LKAC D+R
Sbjct: 71 QLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVR 130
Query: 146 QVKGVHSLV----VKSKDF--NSVIH------------------------SLTRLITFYC 175
K VH V ++S F N ++H + +I
Sbjct: 131 NGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLV 190
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
GD + A LF +M E+NV +WT+MI G+ + +E IDLF +M D+G+ NE+T+V+
Sbjct: 191 KMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVA 250
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
VL ACA++G LG+ +H+F N++ N ++ L DMY KCG +E+A R+F + E+
Sbjct: 251 VLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERT 310
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
V +W+++I GLA HG E+A+ +F +M +G+KP+ VT I +L ACSH G++EKG++ F
Sbjct: 311 VVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFA 370
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+M RDY + P ++HYGC+VDL RA LL EA+E I NMP+ PN V+WG+LL C
Sbjct: 371 SMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHK-- 428
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
NV+LAE A L KL+P NDG YV++SNIYA +W+D ++R+LM++R
Sbjct: 429 -NVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDR 477
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 177/511 (34%), Positives = 296/511 (57%), Gaps = 15/511 (2%)
Query: 11 LTHFTNSANSHKNSNTATKS--HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL 68
+ +S ++ + S +A ++ H L LL + Q A ++K+ ++ T+L
Sbjct: 1 MPPLVSSPSAPRLSPSAARAAEQHCLRLLAASSTPTSLLQSVAFLLKSGLHANSLVLTRL 60
Query: 69 AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEA---GLGHRGIQLYTQMIGN 125
S + + + F NT+IR +A + L R + M+
Sbjct: 61 FAASASAAPALLDPLVAALLRPSVPLDAFLANTLIRAHATSPIHSLRLRAAAFFPLMLRG 120
Query: 126 GLDPDSFTYPILLKACGDLRQVKGV----HSLVVKSKDFNSVIHSLTRLITFYCNFGD-- 179
+ P+ FT+P LLKAC L V H+ +K F + + LI Y FG
Sbjct: 121 AVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKF-GFATDQYVSNTLIHMYSCFGGGF 179
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
+ A+ +FD+M +++ VTW+AMI G+V+ + ++LFR+M+ +GV+ +E+T++ VL+A
Sbjct: 180 LGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAA 239
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
+LGA EL +WV FV + I + L AL D AKCG ++ A+ VF+ + +++V +W
Sbjct: 240 ATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSW 299
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
S+I LA+ G G+EAV++F +M+++G+ PDDV I VLTACSHAG++++G F M+
Sbjct: 300 TSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKV 359
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
+Y +EP ++HYGC+VD+ RA +++ A E +R MP++PN V+W SL++AC + +E
Sbjct: 360 EYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAH---GRLE 416
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
L E L+ P ++ NY+++SN++A +W + ++RR M +R I K PGCS++E++
Sbjct: 417 LGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELD 476
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
VHEF+ GD HP ++IY M+E +A LR
Sbjct: 477 GEVHEFIAGDESHPQYKDIYRMVEEMARELR 507
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 177/462 (38%), Positives = 269/462 (58%), Gaps = 38/462 (8%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
+F++++ ++ +I + + + I+ + M G+ D L AC +L
Sbjct: 332 LFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLV 391
Query: 147 V---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD------------------------ 179
V K +HSL +K S I+ LI Y GD
Sbjct: 392 VNMGKLIHSLSLKIGT-ESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 450
Query: 180 -------VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
V +A+ +FD M EK+VV+W++MI+G+ + + E + LF++M+ SG + +E T
Sbjct: 451 GYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETT 510
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
LVSV+SACA L A E GKWVH ++ +N + +N LG L DMY KCG +E AL VF ++
Sbjct: 511 LVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMI 570
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
EK + TWN++I GLA++G E ++ MF M+ + P+++T + VL AC H GL+++G+
Sbjct: 571 EKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQH 630
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
FY+M D+K++PNVKHYGC+VDLL RA L EA E++ MPM P+ WG+LL AC
Sbjct: 631 HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKH 690
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
D E+ +LI+L+P +DG +VL+SNIYA+K +WDD ++R +M + ++K PG
Sbjct: 691 GDS---EMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPG 747
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
CS+IE N V+HEF+ GD HP + I ML +A+ L+ E Y
Sbjct: 748 CSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGY 789
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 184/402 (45%), Gaps = 97/402 (24%)
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR---QVKGVHSLVVK---- 156
R Y + H LY M+ N L D++TYP+L++AC R + K VH+ V+K
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFD 245
Query: 157 ----------------------SKDFN--SVIHSLT--RLITFYCNFGDVKSAQ------ 184
+ FN SV+ S++ ++ Y G+V+ A+
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305
Query: 185 -------------------------LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
LFD+M EK++VTW+A+I + + Y E I F
Sbjct: 306 PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFV 365
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVH---------EFVN-KNCII-LNDKLG 268
M GV V+E+ VS LSACANL +GK +H ++N +N +I + K G
Sbjct: 366 GMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCG 425
Query: 269 -----------AALTDM---------YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
A L D+ Y KC ++ A +F + EK+V +W+S+I G A
Sbjct: 426 DIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQ 485
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
+ +E + +F +MQMSG KPD+ TL++V++AC+ +E+GK + ++R+ + NV
Sbjct: 486 NDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRN-GLTINVI 544
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
L+D+ + ++ A EV M +E W +L+ A
Sbjct: 545 LGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALILGLA 585
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 10/250 (4%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I + + + A +F+ + +++++I GYA+ L + L+ +M +G PD
Sbjct: 448 MISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPD 507
Query: 131 SFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T ++ AC L Q K VH+ + ++ +VI T LI Y G V++A +F
Sbjct: 508 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILG-TTLIDMYMKCGCVETALEVF 566
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
M EK + TW A+I G +D+F M+ V NE+T + VL AC ++G +
Sbjct: 567 YGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVD 626
Query: 248 LGKWVHEF---VNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSII 303
G+ H F ++ + I N K + D+ + G ++EA + ++ + +V TW +++
Sbjct: 627 EGQ--HHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALL 684
Query: 304 GGLAIHGCGE 313
G HG E
Sbjct: 685 GACKKHGDSE 694
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 182/514 (35%), Positives = 302/514 (58%), Gaps = 45/514 (8%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q ++V I+K D + + LI+ S + A +F+++ + ++N +I
Sbjct: 215 QGEKVRGFIVKTGMD---LDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMIS 271
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLD-PDSFTYPILLKACGDLRQVK---GVHSLVVKSKDF 160
GY I + +M G + PD T L AC L+ ++ +H+ V K F
Sbjct: 272 GYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGF 331
Query: 161 NSVIHS-----------------------------LTRLITFYCNFGDVKSAQLLFDQMT 191
+ I + T +I+ Y N GD++ A+ LFD+
Sbjct: 332 TTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSP 391
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
++VV WTAMING+V+ ++ + + LFR+M+ ++ ++ T+V++L+ CA LGA E GKW
Sbjct: 392 VRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKW 451
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+H ++++N I ++ +G AL +MY+KCG ++++L +F + +K+ +W SII GLA++G
Sbjct: 452 IHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGK 511
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
EA+++F +M+ G KPDD+T I VL+ACSH GL+E+G+ F +M++ +++EP V+HYG
Sbjct: 512 TSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYG 571
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAV---LWGSLLTACASADDGANVELAEIAMERL 428
C++DLL RA LLDEA E+I+ +P+E + L+G+LL+AC + NV++ E ++L
Sbjct: 572 CVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHN---NVDMGERLAKKL 628
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
+E + + L++NIYA+ +W+DA K+RR MKE + K PGCS+IE++ +VHEF+VG
Sbjct: 629 ENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVG 688
Query: 489 DGRHPCSEEIYSMLEYVA---ISLREECYAARMP 519
D HP EI SML V + L+E + MP
Sbjct: 689 DPSHPEMIEICSMLNRVTGQLLGLKESQVESVMP 722
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/457 (30%), Positives = 234/457 (51%), Gaps = 54/457 (11%)
Query: 14 FTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE 73
F +S SN T + L+ C + Q KQ+ +QI + + DT + KL+
Sbjct: 81 FKPPFSSSSASNLQTNKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGD--RDT-INKLMA 137
Query: 74 SLVNSS--QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS 131
+SS + YA +FN + +PS F +N +++ YA+ G+ + + L+ Q+ +GL PD
Sbjct: 138 FCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDG 197
Query: 132 FTYPILLKACG---DLRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
FTYP +LKA G D+RQ + V +VK+ D ++ +++ LI Y +V++A+ LF
Sbjct: 198 FTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYN--SLIDMYYELSNVENAKKLF 255
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE-VNELTLVSVLSACANLGAS 246
D+MT ++ V+W MI+G+V+ + + + I+ FR+M+ G E +E T+VS LSAC L
Sbjct: 256 DEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNL 315
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
ELG +H +V K + ++ AL DMYAKCG + A +F + KNV W S+I G
Sbjct: 316 ELGDEIHNYVRKE-LGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGY 374
Query: 307 AIHGCG---------------------------------EEAVKMFWQMQMSGIKPDDVT 333
CG ++AV +F +MQ+ IKPD T
Sbjct: 375 I--NCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFT 432
Query: 334 LIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
++ +LT C+ G +E+GK I + + ++ +V L+++ + +D++ E+ +
Sbjct: 433 VVTLLTGCAQLGALEQGKWI-HGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYEL 491
Query: 394 PMEPNAVLWGSLLTACASADDGANVELAEI--AMERL 428
+ + W S++ C A +G E + MER+
Sbjct: 492 E-DKDTASWTSII--CGLAMNGKTSEALRLFSEMERV 525
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 191/515 (37%), Positives = 285/515 (55%), Gaps = 46/515 (8%)
Query: 32 HHLPLLQKCTHLVQFKQVHAQIIKASF--DNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
HHL L +C + + +++HAQ + + ++IS K+ S + A A +F+
Sbjct: 24 HHL--LTQCKTIRELQRIHAQALTHGLHPNQQSIS----CKIFRSYAEFGRPADAGRLFD 77
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQ 146
+I +P +F +++ + + + I +++ I +G PD F L A G D R
Sbjct: 78 EIPHPDIISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRI 137
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD------------------ 188
VH L+ + +S + L+ YC G + A+ +FD
Sbjct: 138 GSVVHGLIFRCG-LDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYM 196
Query: 189 -------------QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
QM K+ V+WTA+I GHV+ K + ++LF KM G N +T+V
Sbjct: 197 KCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVG 256
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
VLSACA++GA +LG+ +H + +K+ N + AL DMYAK G I A VF+ V K+
Sbjct: 257 VLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKD 316
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
TW ++I + G G +AV++FW M SGI P+ VT ++VL+ACSHAGLI++G+E+F
Sbjct: 317 AFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFD 376
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
MR Y ++P ++HYGC+VDLL R LL+EA +I +M +EP+ V+W SLL+AC +
Sbjct: 377 KMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAH--- 433
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
N LAEIA +IK EP +DG YVL+ N+YA +W +A MR+ M R I K PGCS
Sbjct: 434 GNDRLAEIAGMEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSW 493
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
IE++ VVHEF+V D H EIY LE +A L+
Sbjct: 494 IEVDGVVHEFLVEDKTHDARREIYVTLEIMARHLK 528
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 180/517 (34%), Positives = 291/517 (56%), Gaps = 44/517 (8%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LL C Q KQVHA++I I +L K + S+ + I+YAH+VF+ P
Sbjct: 7 LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIF--APISYAHMVFDHFPQPD 64
Query: 96 TFAFNTVIR--GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG------DLRQV 147
F +NT+I+ ++ + + + L P+ +++ K CG + QV
Sbjct: 65 LFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQV 124
Query: 148 KGVHSL-----------------------VVKSKDF-----NSVIHSLTRLITFYCNFGD 179
+ VH++ VV ++ N ++S +++ Y G
Sbjct: 125 R-VHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGK 183
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
+ A+ LFD+M EK+VV+WT MI+G ++ + E +D+F M G+ NE TL S L+A
Sbjct: 184 MDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAA 243
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK--IVLEKNVC 297
CANL A + G+W+H ++ KN I +N++L A L DMYAKCG +E A ++F L++ V
Sbjct: 244 CANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVW 303
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
WN++IGG A+HG +EA+++F QM++ + P+ VT +A+L ACSH +E+G+ F +M
Sbjct: 304 PWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESM 363
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
Y+V+P ++HYGCLVDLL RA L EA E+I +M + P+ +WG+LL+AC D
Sbjct: 364 ASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDA-- 421
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
E+ E + + +L+P + G +VL++NIY+ W++A +R + E K PGCS IE
Sbjct: 422 -EMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSIE 480
Query: 478 INDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+N + H+F+VGD HP ++++Y L+ + L+ Y
Sbjct: 481 LNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGY 517
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 280/483 (57%), Gaps = 47/483 (9%)
Query: 24 SNTATKSHHHLPLLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ 80
+N + S+ L++ C + Q + VH + + FD+ T L S+ +
Sbjct: 74 ANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSM---GR 130
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
I + VF+++ FA+ T++ G G +L+ M PD
Sbjct: 131 IEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMM------PDR--------- 175
Query: 141 CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
+N++I RL +V A+LLF+QM +++++WT
Sbjct: 176 ---------------NLATWNTLIDGYARL-------REVDVAELLFNQMPARDIISWTT 213
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
MIN + + K +RE + +F +M G+ +E+T+ +V+SACA+LGA +LGK +H ++ ++
Sbjct: 214 MINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHG 273
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
L+ +G+AL DMYAKCG ++ +L +F + EKN+ WNS+I GLA+HG EEA+ MF
Sbjct: 274 FNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFD 333
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M+ IKP+ VT ++VL+AC+HAGLIE+G++ F +M RD+ + P V+HYGC+VDLL +A
Sbjct: 334 KMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKA 393
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
LL+EA ++IR M +EPNAV+WG+LL+ C N+E+A++A +L+ LEP N G Y
Sbjct: 394 GLLEEALQLIRTMKLEPNAVIWGALLSGCKLHR---NLEIAQVAANKLMVLEPGNSGYYT 450
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKN-PGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
L+ N+ A +W +A K+R MKE+ + K PG S IE+ VH+F D H S+EIY
Sbjct: 451 LLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCPGSSWIEMESQVHQFAASDKSHAASDEIY 510
Query: 500 SML 502
S+L
Sbjct: 511 SLL 513
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 167/345 (48%), Gaps = 47/345 (13%)
Query: 70 KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP 129
+ I +L +++ YA L + Q+ P+ F +N +I+G+ ++ + ++LY QM+ + P
Sbjct: 19 QFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVSP 78
Query: 130 DSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
S+T+P L+KACG LR + VH V ++ F+S + T L+ FY + G ++ + +
Sbjct: 79 TSYTFPSLIKACGLVSQLRFAEAVHGHVWRN-GFDSHVFVQTSLVDFYSSMGRIEESVRV 137
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD+M E++V WT M++G V+ + LF M D
Sbjct: 138 FDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPD----------------------R 175
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
L W L D YA+ ++ A +F + +++ +W ++I
Sbjct: 176 NLATW-----------------NTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCY 218
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEP 365
+ + EA+ +F +M GI PD+VT+ V++AC+H G ++ GKEI +Y M+ + ++
Sbjct: 219 SQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDV 278
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ L+D+ + LD + + + E N W S++ A
Sbjct: 279 YIG--SALIDMYAKCGSLDRSLLMFFKL-REKNLFCWNSVIEGLA 320
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 19/267 (7%)
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+++++VK+ N + + + I+ F + A L + QM NV + AMI G V+
Sbjct: 1 MYAVMVKTNT-NQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSY 59
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ ++L+ +M + V T S++ AC + + VH V +N + +
Sbjct: 60 QPVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQT 119
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
+L D Y+ G IEE++RVF + E++V W +++ GL G A ++F M P
Sbjct: 120 SLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMM------P 173
Query: 330 DD--VTLIAVLTACSHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
D T ++ + ++ + +F M RD + + +++ + + EA
Sbjct: 174 DRNLATWNTLIDGYARLREVDVAELLFNQMPARD------IISWTTMINCYSQNKRFREA 227
Query: 387 YEVIRNMP---MEPNAVLWGSLLTACA 410
V M + P+ V ++++ACA
Sbjct: 228 LGVFNEMAKHGISPDEVTMATVISACA 254
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 184/500 (36%), Positives = 308/500 (61%), Gaps = 28/500 (5%)
Query: 26 TATKSHHHLPLLQ---KCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
T+ ++H+ LLQ +C + Q KQ+HA ++++ N + + ++++ + +
Sbjct: 15 TSKPTNHYNLLLQHLNECKDMSQLKQIHALSLRSTLPNHSTTLFLYSRILH-FSSLHDLN 73
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAG---LGHRGIQLYTQMIGNGLD-PDSFTYPILL 138
YA+ VF+Q+ NP++F +N +IR A++ L I LY M+ PD+ T+P +L
Sbjct: 74 YAYRVFDQVDNPNSFMWNILIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFPFVL 133
Query: 139 KACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
KAC L + K H+ ++K F S ++ LI FY + G ++SA+ +FD+M ++++
Sbjct: 134 KACAYLFALFEGKQAHAHLLK-LGFQSDVYINNSLIHFYASCGSLESAKNVFDKMPQRSL 192
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V+W AMI+ V + + LF + + E + T+ SV++ACA L A LG W H F
Sbjct: 193 VSWNAMIDAFVLFGEFETALQLFVQFQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAF 252
Query: 256 VNKNC--------IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
+ +NC +++N+ +L DMY KCG ++ A ++F+ + + +V +WNS+I G A
Sbjct: 253 LLRNCGVSVARDHVLVNN----SLLDMYCKCGSLDIATQIFEGMQKHDVTSWNSMILGFA 308
Query: 308 IHGCGEEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
+HG GE A++ F +M ++S P+ +T + VL+AC+H ++ +G++ F M +YK+EP
Sbjct: 309 MHGKGELALECFERMIRISRFVPNSITFVGVLSACNHRYMVNEGRKYFDMMVNEYKIEPQ 368
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE-IAM 425
++HYGCLVD+L RA L+DEA E++ +MPM+P+ V+W SLL +C + A+VEL+E IA
Sbjct: 369 LEHYGCLVDILARAGLIDEALELVASMPMKPDVVIWRSLLDSCCKKN--ASVELSENIAR 426
Query: 426 ERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEF 485
+ L E + G YVL+S +YA+ ++W+D G +R+LM I+K PGCS+IE++ V HEF
Sbjct: 427 QILESEEADSSGVYVLLSRVYASASRWNDVGLVRKLMTNNGILKEPGCSLIEVDGVTHEF 486
Query: 486 MVGDGRHPCSEEIYSMLEYV 505
GD HP ++EIY +L V
Sbjct: 487 FAGDTSHPQTKEIYQVLNVV 506
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 180/505 (35%), Positives = 282/505 (55%), Gaps = 43/505 (8%)
Query: 35 PLLQK-CTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
PLL K C L + ++ ++ FD+ + L LV+ + A +F++
Sbjct: 111 PLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHL---LVSCGDLDGARKMFDK 167
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK-G 149
++N++I GY G + + Y +M G+ PD T ++ +C L + G
Sbjct: 168 SCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLG 227
Query: 150 VHS----------------------------LVVKSKDFNSVIH----SLTRLITFYCNF 177
S L K F+S+ + S T ++ Y
Sbjct: 228 RESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQS 287
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
G + A LFD+M +K+VV W AMI G+V +E + LF +M+ + +E+T+VS L
Sbjct: 288 GLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCL 347
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
SAC+ LGA ++G W+H ++ K+ + LN LG AL DMYAKCG I +A++VF+ + +N
Sbjct: 348 SACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSL 407
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
TW +II GLA+HG A+ F +M + + PD+VT + +L+AC H GL+E+G++ F M
Sbjct: 408 TWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQM 467
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ + P +KHY C+VDLL RA LL+EA E+I++MP+E +AV+WG+L AC N
Sbjct: 468 SSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIH---GN 524
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
V + E A +L++++P + G YVL++N+Y W +AGK R+LM++R + K PGCS IE
Sbjct: 525 VLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIE 584
Query: 478 INDVVHEFMVGDGRHPCSEEIYSML 502
+N +V+EF+V D HP SE+IY L
Sbjct: 585 VNGIVYEFIVRDKSHPQSEQIYECL 609
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 216/411 (52%), Gaps = 37/411 (9%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LL+KC + Q KQ+ +Q++ + ++L ++ + Y + N
Sbjct: 10 LSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFC-AISEWRDLDYCTNILFNTRN 68
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKACGDLRQVKGVHS 152
P+TF++N IRG+ ++ + LY +++ +G PD++TYP+L KAC L ++
Sbjct: 69 PNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSE 128
Query: 153 LV--VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
++ V F+S I +I + GD+ A+ +FD+ +++V+W +MING+V++
Sbjct: 129 ILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGW 188
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E ++ +R+M+ G++ +E+T++ V+S+CA L +LG+ H ++ +N + L L A
Sbjct: 189 AYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANA 248
Query: 271 LTDMYAKCGYIEEALRVFKIVL-------------------------------EKNVCTW 299
L DMY KCG +E A ++F + +K+V W
Sbjct: 249 LMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPW 308
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N++IGG G+EA+ +F +MQ I PD+VT+++ L+ACS G ++ G I + + +
Sbjct: 309 NAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK 368
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+++ NV L+D+ + + +A +V + +P N++ W ++++ A
Sbjct: 369 -HELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLA 417
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 202/610 (33%), Positives = 313/610 (51%), Gaps = 107/610 (17%)
Query: 4 QLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKC--THLVQF--KQVHAQIIKASFD 59
Q P+ L H+ SH ++ T P+L +C + +F +Q+HA + + FD
Sbjct: 83 QNSPHQALLHYKLFLASHAKPDSYT-----YPILLQCCAARVSEFEGRQLHAHAVSSGFD 137
Query: 60 N----------------------RTISDTQLAKLIE------SLVNSSQIAYAHLVFNQI 91
R ++ + L+ V + ++ A VF +
Sbjct: 138 GDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGM 197
Query: 92 INPSTFAFNTVI-------------------RG--------------YAEAGLGHRGIQL 118
+T A N++I RG Y + +G + L
Sbjct: 198 PERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVL 257
Query: 119 YTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKS--KDF----NSVIH---- 165
+ +M G+G+ D L AC + V + VH L VK +D+ N++IH
Sbjct: 258 FVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSS 317
Query: 166 ---------------------SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMING 204
S +I+ Y G ++ A++LF M EK+VV+W+AMI+G
Sbjct: 318 CGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISG 377
Query: 205 HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
+ + + + E + LF++M+ GV +E LVS +SAC +L +LGKW+H ++++N + +N
Sbjct: 378 YAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVN 437
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
L L DMY KCG +E AL VF + EK V TWN++I GLA++G E+++ MF M+
Sbjct: 438 VILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKK 497
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
+G P+++T + VL AC H GL+ G+ F +M ++K+E N+KHYGC+VDLL RA LL
Sbjct: 498 TGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLK 557
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSN 444
EA E+I +MPM P+ WG+LL AC D E+ E +LI+L+P +DG +VL+SN
Sbjct: 558 EAEELIDSMPMAPDVATWGALLGACRKHRDN---EMGERLGRKLIQLQPDHDGFHVLLSN 614
Query: 445 IYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEY 504
IYA+K W + ++R +M + +VK PGCS+IE N VHEF+ GD HP +I ML+
Sbjct: 615 IYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDV 674
Query: 505 VAISLREECY 514
VA L+ E Y
Sbjct: 675 VAAKLKIEGY 684
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 216/477 (45%), Gaps = 107/477 (22%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LLQ C FKQ+ +Q I + ++L Y+ +FN + NP+
Sbjct: 9 LLQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPN 68
Query: 96 TFAFNTVIRGYAE-AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG-DLRQVKG--VH 151
TF +NT++R + H+ + Y + + PDS+TYPILL+ C + + +G +H
Sbjct: 69 TFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLH 128
Query: 152 SLVVKSKDFNSVIH-------------------------------SLTRLITFYCNFGDV 180
+ V S F+ ++ S L+ Y G+V
Sbjct: 129 AHAVSS-GFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEV 187
Query: 181 KSAQLLFDQMTEKN---------------------------------VVTWTAMINGHVK 207
+ A+ +F+ M E+N +V+W+AM++ + +
Sbjct: 188 EEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQ 247
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH---------EFVN- 257
+ E + LF +M+ SGV V+E+ +VS LSAC+ + E+G+WVH ++V+
Sbjct: 248 NEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSL 307
Query: 258 KNCI---------------ILNDKLGAALTDM---------YAKCGYIEEALRVFKIVLE 293
KN + I +D G L D+ Y +CG I++A +F + E
Sbjct: 308 KNALIHLYSSCGEIVDARRIFDD--GGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPE 365
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K+V +W+++I G A H C EA+ +F +MQ+ G++PD+ L++ ++AC+H ++ GK I
Sbjct: 366 KDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWI 425
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ R+ K++ NV L+D+ + ++ A EV M E W +++ A
Sbjct: 426 HAYISRN-KLQVNVILSTTLIDMYMKCGCVENALEVFYAME-EKGVSTWNAVILGLA 480
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 177/463 (38%), Positives = 269/463 (58%), Gaps = 38/463 (8%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
+F++++ ++ +I + + + I+ + M G+ D L AC +L
Sbjct: 197 LFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLV 256
Query: 147 V---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD------------------------ 179
V K +HSL +K S I+ LI Y GD
Sbjct: 257 VNMGKLIHSLSLKIGT-ESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 315
Query: 180 -------VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
V +A+ +FD M EK+VV+W++MI+G+ + + E + LF++M+ SG + +E T
Sbjct: 316 GYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETT 375
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
LVSV+SACA L A E GKWVH ++ +N + +N LG L DMY KCG +E AL VF ++
Sbjct: 376 LVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMI 435
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
EK + TWN++I GLA++G E ++ MF M+ + P+++T + VL AC H GL+++G+
Sbjct: 436 EKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQH 495
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
FY+M D+K++PNVKHYGC+VDLL RA L EA E++ MPM P+ WG+LL AC
Sbjct: 496 HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKH 555
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
D E+ +LI+L+P +DG +VL+SNIYA+K +WDD ++R +M + ++K PG
Sbjct: 556 GDS---EMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPG 612
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
CS+IE N V+HEF+ GD HP + I ML +A+ L+ E Y
Sbjct: 613 CSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYT 655
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 197/426 (46%), Gaps = 97/426 (22%)
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK 139
I Y +FN I N + F +N +IR Y + H LY M+ N L D++TYP+L++
Sbjct: 27 HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQ 86
Query: 140 ACGDLR---QVKGVHSLVVK--------------------------SKDFN--SVIHSLT 168
AC R + K VH+ V+K + FN SV+ S++
Sbjct: 87 ACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVS 146
Query: 169 --RLITFYCNFGDVKSAQ-------------------------------LLFDQMTEKNV 195
++ Y G+V+ A+ LFD+M EK++
Sbjct: 147 WNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDM 206
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH-- 253
VTW+A+I + + Y E I F M GV V+E+ VS LSACANL +GK +H
Sbjct: 207 VTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSL 266
Query: 254 -------EFVN-KNCII-LNDKLG-----------AALTDM---------YAKCGYIEEA 284
++N +N +I + K G A L D+ Y KC ++ A
Sbjct: 267 SLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNA 326
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
+F + EK+V +W+S+I G A + +E + +F +MQMSG KPD+ TL++V++AC+
Sbjct: 327 KAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARL 386
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
+E+GK + ++R+ + NV L+D+ + ++ A EV M +E W +
Sbjct: 387 AALEQGKWVHAYIKRN-GLTINVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNA 444
Query: 405 LLTACA 410
L+ A
Sbjct: 445 LILGLA 450
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 10/250 (4%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I + + + A +F+ + +++++I GYA+ L + L+ +M +G PD
Sbjct: 313 MISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPD 372
Query: 131 SFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T ++ AC L Q K VH+ + ++ +VI T LI Y G V++A +F
Sbjct: 373 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILG-TTLIDMYMKCGCVETALEVF 431
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
M EK + TW A+I G +D+F M+ V NE+T + VL AC ++G +
Sbjct: 432 YGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVD 491
Query: 248 LGKWVHEF---VNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSII 303
G+ H F ++ + I N K + D+ + G ++EA + ++ + +V TW +++
Sbjct: 492 EGQ--HHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALL 549
Query: 304 GGLAIHGCGE 313
G HG E
Sbjct: 550 GACKKHGDSE 559
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 179/472 (37%), Positives = 277/472 (58%), Gaps = 13/472 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
K+VH ++ +SD ++ + + I A L+F+++ + +N +I G
Sbjct: 355 KEVHKHAVEVGL----VSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGG 410
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA-CGD--LRQVKGVHSLVVKSKDFNS 162
A+ G + L+ QM G PD+ T+ +L A G+ L VK VHS + + +
Sbjct: 411 VAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDL 470
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ + L+ Y G+ A+ +FD M E+NV TWT MI+G + E LF +M
Sbjct: 471 RVGNA--LVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQML 528
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
G+ + T VS+LSACA+ GA E K VH ++ + ++G AL MYAKCG ++
Sbjct: 529 REGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVD 588
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+A RVF +LE++V +W +IGGLA HG G +A+ +F +M++ G KP+ + +AVL+ACS
Sbjct: 589 DARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACS 648
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
HAGL+++G+ F ++ +DY +EP ++HY C+VDLL RA L+EA I NMP+EP W
Sbjct: 649 HAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPW 708
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL AC + N+E+AE A + +KL+P + YVL+SNIYAA W+ +R +M
Sbjct: 709 GALLGACVTY---GNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMM 765
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ R I K PG S IE+++ +H F+VGD HP S+EIY+ L+ + L+ E Y
Sbjct: 766 QRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGY 817
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 195/392 (49%), Gaps = 26/392 (6%)
Query: 33 HLPLLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
+L +L+ C V K ++HA II++ F + +T L + V I A L+F+
Sbjct: 33 YLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNM---YVKCGSIDDAQLIFD 89
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA---CGDLRQ 146
+++ + ++ +I G A G G + QM G P+S+TY +L A G L
Sbjct: 90 KMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEW 149
Query: 147 VKGVHS------LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
VK VHS L + + N+++H Y G + A+++FD M E+++ +WT
Sbjct: 150 VKEVHSHAVNAGLALDLRVGNALVH-------MYAKSGSIDDARVVFDGMVERDIFSWTV 202
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA--NLGASELGKWVHEFVNK 258
MI G + +E LF +M G N T +S+L+A A + GA E K VH+ K
Sbjct: 203 MIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGK 262
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
I + ++G AL MYAKCG I++A VF + +++V +WN++IGGLA +GCG EA +
Sbjct: 263 AGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTI 322
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
F +MQ G PD T +++L G E KE+ + + + +++ V +
Sbjct: 323 FLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEV-HKHAVEVGLVSDLRVGSAFVHMYI 381
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
R +D+A + + + N W +++ A
Sbjct: 382 RCGSIDDAQLIFDKLAVR-NVTTWNAMIGGVA 412
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 196/376 (52%), Gaps = 14/376 (3%)
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSK 158
+I GYAE G +++Y+QM G P+ TY +LKAC L+ K +H+ +++S
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQS- 59
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
F S + T L+ Y G + AQL+FD+M E+NV++WT MI G +E F
Sbjct: 60 GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
+M+ G N T VS+L+A A+ GA E K VH + L+ ++G AL MYAK
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G I++A VF ++E+++ +W +IGGLA HG G+EA +F QM+ G P+ T +++L
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239
Query: 339 --TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPME 396
+A + G +E KE+ + + + +++ L+ + + +D+A V M +
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFI-SDLRVGNALIHMYAKCGSIDDARLVFDGM-CD 297
Query: 397 PNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF--NDGNYVLMSNIYAAKAQWDD 454
+ + W +++ A +G E I ++ ++ E F + Y+ + N + + W+
Sbjct: 298 RDVISWNAMIGGLAQ--NGCGHEAFTIFLK--MQQEGFVPDSTTYLSLLNTHVSTGAWEW 353
Query: 455 AGKMRRLMKERNIVKN 470
++ + E +V +
Sbjct: 354 VKEVHKHAVEVGLVSD 369
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 214/463 (46%), Gaps = 53/463 (11%)
Query: 47 KQVHAQIIKA--SFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
K+VH+ + A + D R + L+ S I A +VF+ ++ F++ +I
Sbjct: 151 KEVHSHAVNAGLALDLRVGN-----ALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIG 205
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA-----CGDLRQVKGVHSLVVKSKD 159
G A+ G G L+ QM G P+ TY +L A G L VK VH K+
Sbjct: 206 GLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKA-G 264
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
F S + LI Y G + A+L+FD M +++V++W AMI G + E +F
Sbjct: 265 FISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFL 324
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
KM+ G + T +S+L+ + GA E K VH+ + ++ + ++G+A MY +CG
Sbjct: 325 KMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCG 384
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
I++A +F + +NV TWN++IGG+A CG EA+ +F QM+ G PD T + +L+
Sbjct: 385 SIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILS 444
Query: 340 A----------------CSHAGLIEK-------------GKEIFYNMRRDYKVEPNVKHY 370
A AGL++ G ++ D VE NV +
Sbjct: 445 ANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTW 504
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPME---PNAVLWGSLLTACASADDGANVELAEIAMER 427
++ L + EA+ + M E P+A + S+L+ACAS +E +
Sbjct: 505 TVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACAST---GALEWVKEVHSH 561
Query: 428 LIKLEPFND---GNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
+ +D GN ++ ++YA DDA ++ M ER++
Sbjct: 562 AVNAGLVSDLRVGNALV--HMYAKCGSVDDARRVFDDMLERDV 602
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 186/510 (36%), Positives = 296/510 (58%), Gaps = 35/510 (6%)
Query: 24 SNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAY 83
S S L LL++C + Q KQ+H+ +I ++ + ++ L ++ +++ I++
Sbjct: 4 SKYVKASQRCLSLLEQCRTMSQIKQMHSHLIVSASRLDPFAAGKIISLF-AVSSNADISH 62
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A+ +F + + +TF +NT+IR + E + LY M+ G P+++T+ +L+AC D
Sbjct: 63 AYKLFLSLPHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTD 122
Query: 144 LRQVK-GVHSLVVK----SKDF--NSVIH------------------------SLTRLIT 172
V H+ V+K S DF N +IH + T LI
Sbjct: 123 NSPVGLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALIN 182
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
Y G V+ A+ LFDQM E+N V+W+AMI G+V +RE ++LF ++ +G+ N
Sbjct: 183 GYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAG 242
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
+V L+AC+ LG+ + G+W+H +V++N L+ LG AL DMYAKCG IE A VF+ +
Sbjct: 243 IVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMP 302
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
+K+ + S+I GLA HG +A+++F +MQ + P++VT I VL+ACS GL+++G
Sbjct: 303 DKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLR 362
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
IF M Y +EP V+HYGC+VDLL RA LL+EA ++R MPMEP++ + G+LL +C
Sbjct: 363 IFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVH 422
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
D VEL + +E L++ + G +VL+SN+YA+ QWD K+R+ M + + K PG
Sbjct: 423 GD---VELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKVPG 479
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
CS IEI+ V EF+ GD + E++ +L
Sbjct: 480 CSSIEIDGSVSEFIAGDMSYLRVEDVMLVL 509
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 178/499 (35%), Positives = 286/499 (57%), Gaps = 43/499 (8%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
++VHA +++ F S+ L+ V + VF+++ P + +IR Y
Sbjct: 111 EEVHASVVRTGF---ACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAY 167
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSK-DFNS 162
+ ++L+ M GL PD ++ ACG DL K +H + KS + ++
Sbjct: 168 VCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDA 227
Query: 163 VIHSLTRLITFYCNFGDVKSA-------------------------------QLLFDQMT 191
+ S LI+ Y G + A + LF M
Sbjct: 228 FVSS--TLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMP 285
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+++VV+W +MI G + Y+E + F +M SGV N LTL+S LSACA+ GA + G W
Sbjct: 286 DRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAW 345
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+H +V+KN + + L ++L DMY+KCG I++A+++F+ +++ TW SI+ GLA+HG
Sbjct: 346 IHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGR 405
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
GE+A+ F +M+ + ++PDDVT++ VL+AC+HAGL+++G F +M + + + P V+HYG
Sbjct: 406 GEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYG 465
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VDLL R L EAY++I MPME N ++WG+ L+AC + NVEL E+A RL+ L
Sbjct: 466 CMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHN---NVELGEVAARRLLGL 522
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
+P + V++SN+YA +A+WD + +R+ +K++ + K+PGCS IE+N VH F+VGD
Sbjct: 523 DPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNS 582
Query: 492 HPCSEEIYSMLEYVAISLR 510
HPC EI SM+E + +R
Sbjct: 583 HPCYTEINSMVEKIEKLMR 601
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 184/379 (48%), Gaps = 58/379 (15%)
Query: 63 ISDTQLAKLIESLVNSSQIAYAHL-VFNQIINPST---------FAFNTVIRGYAEAGLG 112
+S T+ + + L N +++ H + +PS F +NT+IR E GL
Sbjct: 11 LSHTRFSFRLHPLTNPNKLPRIHGNTIATVEDPSAASRLDCANVFVWNTMIRKQVENGLI 70
Query: 113 HRGIQL--YTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVIHSL 167
R L Y Q + GL P+ T+ LLKA ++VK VH+ VV++ S S
Sbjct: 71 TRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHASVVRTGFACSEFVS- 129
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
L+ FY G V + +FD+M + +V WT +I +V + ++LFR MR+ G+
Sbjct: 130 GALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLT 189
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+ + + +V+SAC LG + K +H F+ K+ I ++ + + L Y +CG ++ A R
Sbjct: 190 PDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRF 249
Query: 288 FK------IVL-------------------------EKNVCTWNSIIGGLAIHGCGEEAV 316
F+ IV+ +++V +WNS+IGG A G +EA+
Sbjct: 250 FQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEAL 309
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY-----NMRRDYKVEPNVKHYG 371
F +M+ SG+ P+ +TL++ L+AC+ G ++ G I +M RD ++ +
Sbjct: 310 TWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSS----- 364
Query: 372 CLVDLLCRARLLDEAYEVI 390
L+D+ + +D+A ++
Sbjct: 365 -LIDMYSKCGDIDKAVQIF 382
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 4/215 (1%)
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRD--SGVEVNELTLVSVLSACANLGASELGKW 251
NV W MI V+ L M+ +G+ N T + +L A + + G+
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
VH V + ++ + AL Y CG + + +VF + + + W II
Sbjct: 113 VHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTF 172
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
E+A+++F M+ G+ PD V + V++AC G + K + + + +E +
Sbjct: 173 PEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKS-GIEVDAFVSS 231
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
L+ LD AY + PM+ N V+W +++
Sbjct: 232 TLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMI 265
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 171/471 (36%), Positives = 281/471 (59%), Gaps = 11/471 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+Q+ II+A + + D L+ + AH VF +I + A+N +I Y
Sbjct: 433 QQIQDHIIEAGYGS---DDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAY 489
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSV 163
+ + + ++ G+ P+S T+ +L C L K VH L++K+ S
Sbjct: 490 VQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA-GLESD 548
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+H L++ + N GD+ SA+ LF+ M ++++V+W +I G V+ + D F+ M++
Sbjct: 549 LHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE 608
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
SG++ +++T +L+ACA+ A G+ +H + + + +G L MY KCG IE+
Sbjct: 609 SGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIED 668
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A +VF + +KNV +W S+I G A HG G+EA+++F+QMQ G+KPD +T + L+AC+H
Sbjct: 669 AHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAH 728
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
AGLIE+G F +M +++ +EP ++HYGC+VDL RA LL+EA E I M +EP++ +WG
Sbjct: 729 AGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWG 787
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL AC NVELAE A ++ ++L+P ++G +V++SNIYAA W + KMR++M
Sbjct: 788 ALLGACQVH---LNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVML 844
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+R +VK PG S IE++ VH F D HP +EEI++ LE + + +R+ Y
Sbjct: 845 DRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGY 895
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 187/335 (55%), Gaps = 20/335 (5%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A +F+ + +++N ++ GY + GL +L+ QM+ + + PD T+ +L AC D
Sbjct: 164 AKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACAD 223
Query: 144 LRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
R V + +++L++K+ +++ + T LI + GD+ A +FD + +++VTWT+
Sbjct: 224 ARNVDKGRELYNLILKA-GWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTS 282
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
MI G + +++ +LF++M + GV+ +++ VS+L AC + A E GK VH + +
Sbjct: 283 MITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVG 342
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+G A+ MY KCG +E+AL VF +V +NV +W ++I G A HG +EA F
Sbjct: 343 WDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFN 402
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG-------CL 373
+M SGI+P+ VT +++L ACS +++G++I +D+ +E YG L
Sbjct: 403 KMIESGIEPNRVTFMSILGACSSPSALKRGQQI-----QDHIIEAG---YGSDDRVRTAL 454
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+ + + L +A+ V + + N V W +++TA
Sbjct: 455 LSMYAKCGSLKDAHRVFEKISKQ-NVVAWNAMITA 488
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 183/365 (50%), Gaps = 9/365 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
++++ I+KA +D T LI + I A VF+ + + ++I G
Sbjct: 231 RELYNLILKAGWDTDLFVGT---ALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGL 287
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSV 163
A G + L+ +M G+ PD + LL+AC L Q K VH+ + K +++
Sbjct: 288 ARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM-KEVGWDTE 346
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
I+ T +++ Y G ++ A +FD + +NVV+WTAMI G + E F KM +
Sbjct: 347 IYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE 406
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
SG+E N +T +S+L AC++ A + G+ + + + + +D++ AL MYAKCG +++
Sbjct: 407 SGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKD 466
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A RVF+ + ++NV WN++I H + A+ F + GIKP+ T ++L C
Sbjct: 467 AHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKS 526
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
+ +E GK + + + + +E ++ LV + L A + +MP + + V W
Sbjct: 527 SDSLELGKWVHFLIMK-AGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWN 584
Query: 404 SLLTA 408
+++
Sbjct: 585 TIIAG 589
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 165/347 (47%), Gaps = 35/347 (10%)
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLV--VKS 157
N V+ ++AG + +Q+ ++ + + TY LL+ C + + + +K
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
I LI Y G+ SA+ +FD M EK+V +W ++ G+V+ Y E L
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
+M V+ ++ T VS+L+ACA+ + G+ ++ + K + +G AL +M+ K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG I +A +VF + +++ TW S+I GLA HG ++A +F +M+ G++PD V +++
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 338 LTACSHAGLIEKGKEIFYNMRR------------------------------DYKVEPNV 367
L AC+H +E+GK++ M+ D NV
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNM---PMEPNAVLWGSLLTACAS 411
+ ++ + +DEA+ M +EPN V + S+L AC+S
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS 425
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/425 (38%), Positives = 259/425 (60%), Gaps = 6/425 (1%)
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKG 149
+PST ++ +I Y +AG I + + +G+ PDSFT +L AC DL +
Sbjct: 3 HPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEA 62
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
V + + + + T + Y G+++ A+ +FD+M ++ V W AM+ G+
Sbjct: 63 VWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNG 122
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ RE +DLF M+ G + + T+V LSAC LGA +LG+ V+ + ++ N LG
Sbjct: 123 HPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGT 182
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG EA VF+ +LE+++ WN++I GL + G + A + QM+ SG+K
Sbjct: 183 ALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKL 242
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+D T I +L +C+H GL+ G++ F+NM Y++ P ++HYGC+VDL RA LL+EA+++
Sbjct: 243 NDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQL 302
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I +MPM NAV+WG+LL C N +LAE A+++LI+LEP+N GNYV++SNIY+
Sbjct: 303 IGDMPMLANAVVWGALLGGCKIHR---NADLAEHALKQLIRLEPWNSGNYVMLSNIYSNS 359
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+W+DA K+R MK + I K P S +E++ VH+F VGD HP S++IY+ L+ + + +
Sbjct: 360 GRWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAKLDELGMEM 419
Query: 510 REECY 514
+ Y
Sbjct: 420 KAMGY 424
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
M + V+WTA+I ++ + E I + R+ SG+ + T V VL+ACA + E G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 250 KWVHEFVNKNCIILNDKLGA-ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
+ V + + A A D+Y KCG +E+A VF + ++ W +++GG A
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
+G EA+ +F+ MQM G KPD T++ L+AC+ G ++ G++ + D +V N
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWD-EVLGNPV 179
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
L+D+ + EA+ V + M +E + ++W +++
Sbjct: 180 LGTALIDMYAKCGSTSEAWMVFQQM-LERDIIVWNAMI 216
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 14/243 (5%)
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYP 135
V ++ A VF+++ N A+ ++ GYA G + L+ M G PD +T
Sbjct: 88 VKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTVV 147
Query: 136 ILLKACGDL------RQVKG-VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
L AC L RQ G VH V N V+ T LI Y G A ++F
Sbjct: 148 GALSACTRLGALDLGRQAVGMVHWDEVLG---NPVLG--TALIDMYAKCGSTSEAWMVFQ 202
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
QM E++++ W AMI G + + L +M+ SGV++N+ T + +L +C + G
Sbjct: 203 QMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVND 262
Query: 249 GK-WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGGL 306
G+ + H + I + + D++++ G +EEA ++ + + N W +++GG
Sbjct: 263 GRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGC 322
Query: 307 AIH 309
IH
Sbjct: 323 KIH 325
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/499 (36%), Positives = 279/499 (55%), Gaps = 17/499 (3%)
Query: 20 SHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIK-ASFDNRTISDTQLAKLIESLVNS 78
SH A KS LP L +Q+HA+ +K S N + L L+
Sbjct: 69 SHLTIPIALKSASRLP-----HPLRAGEQLHARSLKLPSHTNPHV----LTSLLSLYAKC 119
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
+ A VF+++ +PST + +I Y +AG + + NG+ PDSFT +L
Sbjct: 120 GLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVL 179
Query: 139 KACGDLRQVKGVHSLVVKSKDFNSVIHSL---TRLITFYCNFGDVKSAQLLFDQMTEKNV 195
AC + + V ++ + V S+ T + Y G++ A+ +FD+M K+
Sbjct: 180 TACARIADL-ATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDA 238
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V W AM+ G+ + RE +DLF M+ G++ + + LSAC LGA +LG+
Sbjct: 239 VAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRM 298
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
V+ + + N LG AL DMYAKCG EA VF+ + +K++ WN++I GL + G + A
Sbjct: 299 VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIA 358
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
+ QM+ SG+K +D T I +L +C+H GLI+ G+ F+NM + Y + P ++HYGC+VD
Sbjct: 359 FALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVD 418
Query: 376 LLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN 435
LL RA LL EA++++ +MPM NAV+ G+LL C N ELAE +++LI LEP+N
Sbjct: 419 LLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHR---NTELAEHVLKQLILLEPWN 475
Query: 436 DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
GNYV++SNIY+ + +W+DA K+R MK + + K P CS +E VHEF VGD HP S
Sbjct: 476 SGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLS 535
Query: 496 EEIYSMLEYVAISLREECY 514
++IY L+ + + ++ Y
Sbjct: 536 DQIYKKLDELGLEMKTMGY 554
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 299/522 (57%), Gaps = 20/522 (3%)
Query: 2 LKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTH---LVQFKQVHAQIIKASF 58
Q +S TH T S +S T + + LLQ C L KQ+HAQ F
Sbjct: 21 FSQSFYHSLATHQTASVDSFPPQ--PTTHYGYTSLLQSCIDSKALNPGKQLHAQ-----F 73
Query: 59 DNRTISDTQ--LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
+ I+ Q KL+ S+ + A +F++I + F +N +IRGYA G I
Sbjct: 74 YHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAI 133
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITF 173
LY +M+ GL PD+FT P +LKAC L + + +H V+KS + + LI
Sbjct: 134 ILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKS-GWERDLFVGAALIDM 192
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y G V A +FD++ ++ V W +M+ + + + E I L R+M +GV E TL
Sbjct: 193 YAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATL 252
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
V+V+S+ A++ G+ +H F ++ NDK+ AL DMYAKCG ++ AL +F+ + E
Sbjct: 253 VTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLRE 312
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K V +WN+II G A+HG A+ +F +M+ +PD +T + VL ACS L+++G+ +
Sbjct: 313 KRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRAL 371
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
+ M RDY + P V+HY C++DLL LDEAY++IRNM ++P++ +WG+LL +C
Sbjct: 372 YNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIH- 430
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
NVELAE+A+E+LI+LEP + GNYV+++N+YA +W+ K+R++M ++ I KN C
Sbjct: 431 --GNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIAC 488
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
S IE+ + V+ F+ GD H S+ IY+ L+ + + E YA
Sbjct: 489 SWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYA 530
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 183/496 (36%), Positives = 288/496 (58%), Gaps = 12/496 (2%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
N+ + H L L K L+Q K HAQI+ ++ L I +
Sbjct: 60 NATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNIL---INMYSKCGSVD 116
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG 142
+A VF+++ + S ++NT+I + G + + L QM G FT +L AC
Sbjct: 117 FARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACA 176
Query: 143 D---LRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
L + + +H+ +K+ D N + T L+ Y G +K A +F+ M +++VVTW
Sbjct: 177 AKCALSECQLLHAFAIKAAMDLNVFV--ATALLDVYAKCGLMKDAVCVFESMPDRSVVTW 234
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
++M G+V+ + Y + + LFRK ++G++ ++ + SV+ ACA L A GK ++ ++K
Sbjct: 235 SSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSK 294
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+ N + ++L DMYAKCG IEE+ +VF+ V ++NV WN++I GL+ H E + +
Sbjct: 295 SGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMIL 354
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
F +MQ G+ P+DVT ++VL+AC H GL+ KG++ F M +++ + PNV HY C+VD L
Sbjct: 355 FEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLS 414
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGN 438
RA + EAY++I +P +A +WGSLL +C + N+ELAE+A ++L +EP N GN
Sbjct: 415 RAGQIFEAYDLISKLPFNASASMWGSLLASCRTH---GNLELAEVAAKKLFDIEPHNSGN 471
Query: 439 YVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
Y+L+SN+YAA +WD+ KMR+L+KE ++ K G S IEI D VH FMVG+ HP EI
Sbjct: 472 YLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEI 531
Query: 499 YSMLEYVAISLREECY 514
YS L V L++ Y
Sbjct: 532 YSKLNEVMDELQKLGY 547
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 188/509 (36%), Positives = 291/509 (57%), Gaps = 46/509 (9%)
Query: 41 THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFN 100
T+L KQ H +I + ++ +AK IE+ N+ + YA+ VF P+T+ N
Sbjct: 26 TNLKTLKQSHCFMIITGLNRDNLN---VAKFIEACSNAGHLRYAYSVFTHQPFPNTYLHN 82
Query: 101 TVIRGYA---EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLV 154
T+IR + E I +Y + PD+FT+P +LK + V + VH
Sbjct: 83 TMIRALSLVDERNAHSIAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHGQA 142
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK--------------------- 193
V F+S +H +T LI Y + G + A+ +FD+M +
Sbjct: 143 VVF-GFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLAGYGKVGEMDEA 201
Query: 194 ------------NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
N V+WT +I+G+ + E I++F++M V+ +E+TL++VLSACA
Sbjct: 202 RGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACA 261
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
+LG+ ELG+ + +V+ + L A+ DMYAK G I +AL VF+ V E+NV TW +
Sbjct: 262 DLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTT 321
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
II GLA HG G EA+ MF +M +G+KP+DVT IA+L+ACSH G ++ G F +MR Y
Sbjct: 322 IITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKY 381
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
+ PN++HYGC++DLL RA L EA EVI++MP E NA +WGSLL A D +++
Sbjct: 382 GINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNVHHD---IDVG 438
Query: 422 EIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
E A+ +LIKLEP N GNY+L++N+Y+ +WD++ MR++MK + K G S IE+ +
Sbjct: 439 ERALYQLIKLEPNNSGNYMLLANLYSNLGRWDESRMMRKMMKGIGVKKLAGESSIEVENR 498
Query: 482 VHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
V++F+ GD HP E+I+ +L+ + + ++
Sbjct: 499 VYKFISGDLSHPQVEKIHELLQEMDLQIQ 527
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 188/530 (35%), Positives = 293/530 (55%), Gaps = 49/530 (9%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQV------HAQIIKASFDNRTISDTQLAKLIESLV 76
+S +A H P L K +Q++ H Q + S D ++ +
Sbjct: 113 HSGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAA-----MHFWS 167
Query: 77 NSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI--GNGLDPDSFTY 134
+A+A +F++ ++NT+I GY +GL ++L+ ++ GN + PD T
Sbjct: 168 VRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTV 227
Query: 135 PILLKAC---GDLRQVKGVHSLV-------------------VKSKDF---NSVIH---- 165
+ C GDL K +H V VK NSV
Sbjct: 228 IGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISN 287
Query: 166 ----SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
S T +I + G ++ A++LFD+M E++V W A++ G+V+ K +E I LF +M
Sbjct: 288 RTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEM 347
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
+ S V+ NE+T+V++LSAC+ LGA E+G WVH +++++ + L+ LG +L DMYAKCG I
Sbjct: 348 QKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNI 407
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
++A+ VF + +N TW S+I GLA HG +EA++ F +M G++PD++T I VL+AC
Sbjct: 408 KKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSAC 467
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
HAGL+E G++ F M Y +E +KHY C++DLL RA LDEA +++ MPM+P+AV+
Sbjct: 468 CHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVV 527
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
WG+L AC N+ L E A +L++L+P + G YVL++N+YA A K+R +
Sbjct: 528 WGALFFACRMH---GNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVM 584
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
M+ + K PGCS IE+N VVHEF+V D H + IY L + + +R
Sbjct: 585 MRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTNAIYDCLHEITLQMRH 634
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/489 (36%), Positives = 284/489 (58%), Gaps = 19/489 (3%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQI 91
L C++L+ + H +I+ D D ++ LI ++ A VF++I
Sbjct: 133 LFIACSNLLAVENGRMGHCSVIRRGLDE----DGHVSHSLITMYARCGKMGDARKVFDEI 188
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK--- 148
++N++I GY++ + L+ +M+ G P+ + +L ACG+L +K
Sbjct: 189 SQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGT 248
Query: 149 GVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
V VV++K N + S LI Y GD+ SA+ +FD M +K+ VTW AMI G+ +
Sbjct: 249 WVEEFVVENKMTLNYFMGS--ALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQ 306
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
E I LF+ MR S +++TL+ +LSACA++GA +LGK V + ++ + +
Sbjct: 307 NGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYV 366
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG- 326
G AL DMYAKCG ++ A RVF + +KN +WN++I LA HG +EA+ +F M G
Sbjct: 367 GTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGG 426
Query: 327 -IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
+ P+D+T + VL+AC HAGL+++G+ +F+ M + + P ++HY C+VDL RA L+E
Sbjct: 427 TVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEE 486
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
A++ + MP +P+ V+ G+LL AC N++++E M+ L++LEP N GNYV+ S +
Sbjct: 487 AWDFVMTMPEKPDEVILGALLGACQKR---KNIDISERVMKLLLELEPSNSGNYVISSKL 543
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
YA +WDD+ +MR LMK++ + K PGCS I+IN +HEF GD H EI+ +L+ +
Sbjct: 544 YANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLL 603
Query: 506 AISLREECY 514
LR E Y
Sbjct: 604 IDDLRREGY 612
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 231/399 (57%), Gaps = 20/399 (5%)
Query: 19 NSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNS 78
+S N N S LLQ+C + Q KQ+HAQ++ S ++A L
Sbjct: 21 HSKPNPNRQALSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADL------- 73
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEA-GLGHRGIQLYTQMIGNGLDPDSFTYPIL 137
AYA + F+ I++P+ ++FN +IRG + A ++ Y++M GL P++ TYP L
Sbjct: 74 KDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFL 133
Query: 138 LKACGDLRQVK----GVHSLVVKSKDFNS-VIHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
AC +L V+ G S++ + D + V HSL IT Y G + A+ +FD++++
Sbjct: 134 FIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSL---ITMYARCGKMGDARKVFDEISQ 190
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
K++V+W +MI+G+ K ++ E + LFR+M ++G + NE++LVSVL AC LG +LG WV
Sbjct: 191 KDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWV 250
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG 312
EFV +N + LN +G+AL MY KCG + A R+F + +K+ TWN++I G A +G
Sbjct: 251 EEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMS 310
Query: 313 EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYG 371
EEA+K+F M+MS PD +TLI +L+AC+ G ++ GK++ Y R ++ + V
Sbjct: 311 EEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVG--T 368
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
LVD+ + LD A+ V MP + N V W ++++A A
Sbjct: 369 ALVDMYAKCGSLDNAFRVFYGMP-KKNEVSWNAMISALA 406
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 184/517 (35%), Positives = 299/517 (57%), Gaps = 23/517 (4%)
Query: 4 QLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTH---LVQFKQVHAQIIKASFDN 60
QL+P ++ F +S ++H +++ LL+ C L KQ+HA++ +
Sbjct: 41 QLIPQHKVDSFPSSPSNH---------YYYASLLESCISAKALEPGKQLHARLCQLGIAY 91
Query: 61 RTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYT 120
T+L S+ NS + AH +F++I + F +N +IR YA G I LY
Sbjct: 92 NLDLATKLVNFY-SVCNS--LRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYH 148
Query: 121 QMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNF 177
QM+ GL PD+FT P +LKAC L + + +H V++S + + L+ Y
Sbjct: 149 QMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRS-GWERDVFVGAALVDMYAKC 207
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
G V A+ +FD++ +++ V W +M+ + + + E + L +M GV E TLV+V+
Sbjct: 208 GCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVI 267
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
S+ A++ G+ +H F ++ NDK+ AL DMYAKCG ++ A +F+ + EK V
Sbjct: 268 SSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVV 327
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
+WN+II G A+HG EA+ +F +M M +PD +T + L ACS L+++G+ ++ M
Sbjct: 328 SWNAIITGYAMHGLAVEALDLFERM-MKEAQPDHITFVGALAACSRGRLLDEGRALYNLM 386
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
RD ++ P V+HY C+VDLL LDEAY++IR M + P++ +WG+LL +C + N
Sbjct: 387 VRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTH---GN 443
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
VELAE+A+E+LI+LEP + GNYV+++N+YA +W+ ++R+LM ++ I KN CS IE
Sbjct: 444 VELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIE 503
Query: 478 INDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ + V+ F+ GD HP S IY+ L+ + +RE Y
Sbjct: 504 VKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGY 540
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/499 (36%), Positives = 279/499 (55%), Gaps = 17/499 (3%)
Query: 20 SHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIK-ASFDNRTISDTQLAKLIESLVNS 78
SH A KS LP L +Q+HA+ +K S N + L L+
Sbjct: 548 SHLTIPIALKSASRLP-----HPLRAGEQLHARSLKLPSHTNPHV----LTSLLSLYAKC 598
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
+ A VF+++ +PST + +I Y +AG + + NG+ PDSFT +L
Sbjct: 599 GLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVL 658
Query: 139 KACGDLRQVKGVHSLVVKSKDFNSVIHSL---TRLITFYCNFGDVKSAQLLFDQMTEKNV 195
AC + + V ++ + V S+ T + Y G++ A+ +FD+M K+
Sbjct: 659 TACARIADL-ATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDA 717
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V W AM+ G+ + RE +DLF M+ G++ + + LSAC LGA +LG+
Sbjct: 718 VAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRM 777
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
V+ + + N LG AL DMYAKCG EA VF+ + +K++ WN++I GL + G + A
Sbjct: 778 VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIA 837
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
+ QM+ SG+K +D T I +L +C+H GLI+ G+ F+NM + Y + P ++HYGC+VD
Sbjct: 838 FALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVD 897
Query: 376 LLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN 435
LL RA LL EA++++ +MPM NAV+ G+LL C N ELAE +++LI LEP+N
Sbjct: 898 LLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHR---NTELAEHVLKQLILLEPWN 954
Query: 436 DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
GNYV++SNIY+ + +W+DA K+R MK + + K P CS +E VHEF VGD HP S
Sbjct: 955 SGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLS 1014
Query: 496 EEIYSMLEYVAISLREECY 514
++IY L+ + + ++ Y
Sbjct: 1015 DQIYKKLDELGLEMKTMGY 1033
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/487 (35%), Positives = 288/487 (59%), Gaps = 14/487 (2%)
Query: 34 LPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
+ +L C+ L + +Q+ II+A + + D L+ + AH VF +
Sbjct: 417 MSILGACSSPSALKRGQQIQDHIIEAGYGS---DDRVRTALLSMYAKCGSLKDAHRVFEK 473
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQV 147
I + A+N +I Y + + + ++ G+ P+S T+ +L C L
Sbjct: 474 ISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG 533
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
K VH L++K+ S +H L++ + N GD+ SA+ LF+ M ++++V+W +I G V+
Sbjct: 534 KWVHFLIMKA-GLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQ 592
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
+ D F+ M++SG++ +++T +L+ACA+ A G+ +H + + + +
Sbjct: 593 HGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLV 652
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
G L MY KCG IE+A +VF + +KNV +W S+I G A HG G+EA+++F+QMQ G+
Sbjct: 653 GTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGV 712
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
KPD +T + L+AC+HAGLIE+G F +M +++ +EP ++HYGC+VDL RA LL+EA
Sbjct: 713 KPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAV 771
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
E I M +EP++ +WG+LL AC NVELAE A ++ ++L+P ++G +V++SNIYA
Sbjct: 772 EFIIKMQVEPDSRVWGALLGACQVH---LNVELAEKAAQKKLELDPNDNGVFVILSNIYA 828
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
A W + KMR++M +R +VK PG S IE++ VH F D HP +EEI++ LE + +
Sbjct: 829 AAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHM 888
Query: 508 SLREECY 514
+R+ Y
Sbjct: 889 EMRQLGY 895
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 187/335 (55%), Gaps = 20/335 (5%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A +F+ + +++N ++ GY + GL +L+ QM+ + + PD T+ +L AC D
Sbjct: 164 AKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACAD 223
Query: 144 LRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
R V + +++L++K+ +++ + T LI + GD+ A +FD + +++VTWT+
Sbjct: 224 ARNVDKGRELYNLILKA-GWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTS 282
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
MI G + +++ +LF++M + GV+ +++ VS+L AC + A E GK VH + +
Sbjct: 283 MITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVG 342
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+G A+ MY KCG +E+AL VF +V +NV +W ++I G A HG +EA F
Sbjct: 343 WDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFN 402
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG-------CL 373
+M SGI+P+ VT +++L ACS +++G++I +D+ +E YG L
Sbjct: 403 KMIESGIEPNRVTFMSILGACSSPSALKRGQQI-----QDHIIEAG---YGSDDRVRTAL 454
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+ + + L +A+ V + + N V W +++TA
Sbjct: 455 LSMYAKCGSLKDAHRVFEKISKQ-NVVAWNAMITA 488
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 183/365 (50%), Gaps = 9/365 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
++++ I+KA +D T LI + I A VF+ + + ++I G
Sbjct: 231 RELYNLILKAGWDTDLFVGT---ALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGL 287
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSV 163
A G + L+ +M G+ PD + LL+AC L Q K VH+ + K +++
Sbjct: 288 ARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM-KEVGWDTE 346
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
I+ T +++ Y G ++ A +FD + +NVV+WTAMI G + E F KM +
Sbjct: 347 IYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE 406
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
SG+E N +T +S+L AC++ A + G+ + + + + +D++ AL MYAKCG +++
Sbjct: 407 SGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKD 466
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A RVF+ + ++NV WN++I H + A+ F + GIKP+ T ++L C
Sbjct: 467 AHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKS 526
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
+ +E GK + + + + +E ++ LV + L A + +MP + + V W
Sbjct: 527 SDSLELGKWVHFLIMK-AGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWN 584
Query: 404 SLLTA 408
+++
Sbjct: 585 TIIAG 589
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 165/347 (47%), Gaps = 35/347 (10%)
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLV--VKS 157
N V+ ++AG + +Q+ ++ + + TY LL+ C + + + +K
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
I LI Y G+ SA+ +FD M EK+V +W ++ G+V+ Y E L
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
+M V+ ++ T VS+L+ACA+ + G+ ++ + K + +G AL +M+ K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG I +A +VF + +++ TW S+I GLA HG ++A +F +M+ G++PD V +++
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 338 LTACSHAGLIEKGKEIFYNMRR------------------------------DYKVEPNV 367
L AC+H +E+GK++ M+ D NV
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNM---PMEPNAVLWGSLLTACAS 411
+ ++ + +DEA+ M +EPN V + S+L AC+S
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS 425
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 182/499 (36%), Positives = 279/499 (55%), Gaps = 17/499 (3%)
Query: 20 SHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIK-ASFDNRTISDTQLAKLIESLVNS 78
SH A KS LP L +Q+HA+ +K S N + L L+
Sbjct: 524 SHLTIPIALKSASRLP-----HPLRAGEQLHARSLKLPSHTNPHV----LTSLLSLYAKC 574
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
+ A VF+++ +PST + +I Y +AG + + NG+ PDSFT +L
Sbjct: 575 GLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVL 634
Query: 139 KACGDLRQVKGVHSLVVKSKDFNSVIHSL---TRLITFYCNFGDVKSAQLLFDQMTEKNV 195
AC + + V ++ + V S+ T + Y G++ A+ +FD+M K+
Sbjct: 635 TACARIADL-ATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDA 693
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V W AM+ G+ + RE +DLF M+ G++ + + LSAC LGA +LG+
Sbjct: 694 VAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRM 753
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
V+ + + N LG AL DMYAKCG EA VF+ + +K++ WN++I GL + G + A
Sbjct: 754 VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIA 813
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
+ QM+ SG+K +D T I +L +C+H GLI+ G+ F+NM + Y + P ++HYGC+VD
Sbjct: 814 FALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVD 873
Query: 376 LLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN 435
LL RA LL EA++++ +MPM NAV+ G+LL C N ELAE +++LI LEP+N
Sbjct: 874 LLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHR---NTELAEHVLKQLILLEPWN 930
Query: 436 DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
GNYV++SNIY+ + +W+DA K+R MK + + K P CS +E VHEF VGD HP S
Sbjct: 931 SGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLS 990
Query: 496 EEIYSMLEYVAISLREECY 514
++IY L+ + + ++ Y
Sbjct: 991 DQIYKKLDELGLEMKTMGY 1009
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 285/497 (57%), Gaps = 11/497 (2%)
Query: 22 KNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQI 81
+N +T + S H LL+ L +QVHA II + S + L KLI + + I
Sbjct: 83 RNFDTQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHR---SRSLLTKLISLVCTAGSI 139
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
YA +F + NP +F F+++++ ++ G + Y +M+ +G ++T+ ++KAC
Sbjct: 140 TYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKAC 199
Query: 142 GDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
DL R K +HS V+ + S ++ LI Y D+K A+ +FD M ++ ++ W
Sbjct: 200 ADLSALRLGKEIHSHVMVC-GYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAW 258
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
++I+G+ + +E I LF M +SG + + T+VS+LS+C+ LGA + G W+H++ +
Sbjct: 259 NSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADG 318
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
N LN LG +L +MY +CG + +A VF + E+NV TW ++I G +HG G +A+++
Sbjct: 319 NGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMEL 378
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
F +M+ G +P+++T +AVL+AC+H+GLI+ G+ +F +M+ Y + P V+H C+VD+
Sbjct: 379 FTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFG 438
Query: 379 RARLLDEAYEVIRN-MPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDG 437
RA LL++AY+ I+ +P EP +W S+L AC N +L E ++ +EP N G
Sbjct: 439 RAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMH---RNFDLGVKVAEHVLSVEPENPG 495
Query: 438 NYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEE 497
+YV++SNIYA + D +R +M R + K G S IEIN + F +GD HP +
Sbjct: 496 HYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNT 555
Query: 498 IYSMLEYVAISLREECY 514
IY L+ + E Y
Sbjct: 556 IYRYLDELMCRCSESGY 572
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/455 (38%), Positives = 274/455 (60%), Gaps = 36/455 (7%)
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
I++A+L+F + ++F +NT++R + + + LY M+ G P+++T+ LL+A
Sbjct: 38 ISHAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQA 97
Query: 141 CGDLRQVKG---VHSLVVK----SKDF--NSVIH------------------------SL 167
C L + +H+ V+ + DF N ++H +
Sbjct: 98 CAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTW 157
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
T +I Y G V A+ LFD+M EKN V+W+AMI G+ + +RE ++LF M+ +G
Sbjct: 158 TAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFR 217
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
N +V L+ACA LGA + G+W+H +V++N ++L+ LG AL DMYAKCG +E A RV
Sbjct: 218 PNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRV 277
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
F +L+++V + S+I GLA HG A++MF +MQ G+ P++VT I +L+ACS GL+
Sbjct: 278 FDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLV 337
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
E+G IF +M Y +EP V+HYGCLVDLL RA +L++A V+R MP+EP++ + G+LL
Sbjct: 338 EEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLN 397
Query: 408 ACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
AC D VEL + +E L + + G +VL+SN+YA+ QW+D K+R+ M+E+ +
Sbjct: 398 ACRVHGD---VELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKV 454
Query: 468 VKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
K PGCS+IE++ V EF+ GD H +EI +L
Sbjct: 455 KKVPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLL 489
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/489 (36%), Positives = 283/489 (57%), Gaps = 19/489 (3%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQI 91
L C++L+ + H +I+ D D ++ LI ++ A VF++I
Sbjct: 133 LFIACSNLLAVENGRMGHCSVIRRGLDE----DGHVSHSLITMYARCGKMGDARKVFDEI 188
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK--- 148
++N++I GY++ + L+ +M+ G P+ + +L ACG+L +K
Sbjct: 189 SQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGT 248
Query: 149 GVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
V VV++K N + S LI Y GD+ SA+ +FD M +K+ VTW AMI G+ +
Sbjct: 249 WVEEFVVENKMTLNYFMGS--ALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQ 306
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
E I LF+ MR S +++TL+ +LSACA++GA +LGK V + ++ + +
Sbjct: 307 NGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYV 366
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG- 326
G AL DMYAKCG ++ A RVF + KN +WN++I LA HG +EA+ +F M G
Sbjct: 367 GTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGG 426
Query: 327 -IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
+ P+D+T + VL+AC HAGL+++G+ +F+ M + + P ++HY C+VDL RA L+E
Sbjct: 427 TVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEE 486
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
A++ + MP +P+ V+ G+LL AC N++++E M+ L++LEP N GNYV+ S +
Sbjct: 487 AWDFVMTMPEKPDEVILGALLGACQKR---KNIDISERVMKLLLELEPSNSGNYVISSKL 543
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
YA +WDD+ +MR LMK++ + K PGCS I+IN +HEF GD H EI+ +L+ +
Sbjct: 544 YANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLL 603
Query: 506 AISLREECY 514
LR E Y
Sbjct: 604 IDDLRREGY 612
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 230/399 (57%), Gaps = 20/399 (5%)
Query: 19 NSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNS 78
+S N N S LLQ+C + Q KQ+HAQ++ S ++A L
Sbjct: 21 HSKPNPNRQALSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADL------- 73
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEA-GLGHRGIQLYTQMIGNGLDPDSFTYPIL 137
AYA + F+ I++P+ ++FN +IRG + A ++ Y++M GL P++ TYP L
Sbjct: 74 KDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFL 133
Query: 138 LKACGDLRQVK----GVHSLVVKSKDFNS-VIHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
AC +L V+ G S++ + D + V HSL IT Y G + A+ +FD++++
Sbjct: 134 FIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSL---ITMYARCGKMGDARKVFDEISQ 190
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
K++V+W +MI+G+ K ++ E + LFR+M ++G + NE++LVSVL AC LG +LG WV
Sbjct: 191 KDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWV 250
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG 312
EFV +N + LN +G+AL MY KCG + A R+F + +K+ TWN++I G A +G
Sbjct: 251 EEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMS 310
Query: 313 EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYG 371
EEA+K+F M+MS PD +TLI +L+AC+ G ++ GK++ Y R ++ + V
Sbjct: 311 EEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVG--T 368
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
LVD+ + LD A+ V MP N V W ++++A A
Sbjct: 369 ALVDMYAKCGSLDNAFRVFYGMP-NKNEVSWNAMISALA 406
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/508 (38%), Positives = 281/508 (55%), Gaps = 46/508 (9%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+Q HAQI+ AK++ +S + A +VF++I NPS+ +N++IR Y
Sbjct: 97 QQAHAQIVLHGLQPNAF---LAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAY 153
Query: 107 AEAGLGHRG---IQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHS-------- 152
G ++ Y +M GL D+FT P +LK+C DL +V + VH
Sbjct: 154 TRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLE 213
Query: 153 -----------LVVK-------SKDFNSVI----HSLTRLITFYCNFGDVKSAQLLFDQM 190
+ VK K F+ +I S LI Y G++ A+ LF++M
Sbjct: 214 GDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERM 273
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV--NELTLVSVLSACANLGASEL 248
+N+V+WTAMI+G+ + + + LF +M G E+ N +T+VSVL ACA A E
Sbjct: 274 EHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALER 333
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE--KNVCTWNSIIGGL 306
G+ +H+F N + LN + AL MYAKC + EA F ++ + KN+ WN++I
Sbjct: 334 GRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAY 393
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
A HGCG EAV +F M +G++PD VT + +L+ CSH+GLI+ G F +M + VEP
Sbjct: 394 ASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPR 453
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
V+HY C+VDLL RA L EA E+I MPM+ +WG+LL AC S N+E+AE+A
Sbjct: 454 VEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHR---NLEIAELAAR 510
Query: 427 RLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFM 486
RL LEP N GNYVL+SN+YA W++ K+R L+K + + K+PGCS IEIN H FM
Sbjct: 511 RLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFM 570
Query: 487 VGDGRHPCSEEIYSMLEYVAISLREECY 514
D HP ++EIY LE + ++ Y
Sbjct: 571 GADKSHPQAKEIYKFLEALPEKIKMAGY 598
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 119/285 (41%), Gaps = 29/285 (10%)
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
+LG+ H + + + N L A + MYA G ++ A+ VF + + +NSII
Sbjct: 94 KLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAY 153
Query: 307 AIHG---CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
HG ++ + +M G+ D+ TL VL +C+ + G+ + R +
Sbjct: 154 TRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLR-VGL 212
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
E + L+D+ + ++ +A ++ M + A W +L+ + + +AE
Sbjct: 213 EGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMAS-WNALIAGYMKEGE---IGVAED 268
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA-GKMRRLMKERNIVKN---------PGC 473
ER +E N ++ M + Y + A G ++++ + +K P C
Sbjct: 269 LFER---MEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPAC 325
Query: 474 ---SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
+ +E +H+F G G H + S ++ + +CY+
Sbjct: 326 AQSAALERGRRIHDFANGIGLH-----LNSSVQTALAGMYAKCYS 365
>gi|225435652|ref|XP_002283361.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
[Vitis vinifera]
Length = 461
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/448 (37%), Positives = 281/448 (62%), Gaps = 11/448 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI-INP 94
LLQ+ Q+H+ I+K + D+ + +++ I S ++S I +A LVF+++ I
Sbjct: 8 LLQRSKTTTHLLQLHSLILKTAKDH---NPDLISQFIFS-ISSVSIEFARLVFDRLPIRA 63
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VH 151
FA+N++IR Y ++ + ++L++QM GL PD+FTYP ++KACG V +H
Sbjct: 64 PIFAWNSIIRAYTKSSVPIEAVKLFSQMQRVGLKPDNFTYPFVVKACGRSLVVGAGGAMH 123
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
S++VK+ F+S + L+ Y N V A+ +F++MT ++VV+W++MI G+V
Sbjct: 124 SIIVKA-GFDSDRYVGNTLLRMYANLNAVGLARRVFNEMTVRDVVSWSSMIAGYVACNCQ 182
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
+ + +FR M + + N +TLVS+LSAC L +G+ +H ++ NCI L+ LG A+
Sbjct: 183 ADALMVFRHMMLANEKPNSVTLVSLLSACTRLLNIGVGESIHSYIIVNCIGLDVALGTAI 242
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
+MY+KCG+IE+AL+VF + EKN+ +W +I GLA H GE+A+ +F QM+ +G++PD
Sbjct: 243 LEMYSKCGHIEKALKVFNSLTEKNLQSWTIMISGLADHSHGEDAISLFTQMEQTGLQPDS 302
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
++ +L+ACSH GL+++G+ F M + Y + P ++HYGC+VD+ RA +++EAYE+I+
Sbjct: 303 MSFSEILSACSHLGLVDEGQTFFSQMVKIYNIRPTMEHYGCMVDMFARAGMIEEAYEIIK 362
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
NMPMEPN+V+ S + AC +DG E L+++EP NYVL S + +
Sbjct: 363 NMPMEPNSVILRSFIGAC--RNDGRVFGFDENLRRLLLEIEPDLGANYVLASGVSSLSGC 420
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEIN 479
W++A +R MKE+ + K PG S +E++
Sbjct: 421 WNEAADLRVSMKEKGLKKVPGWSRVEVS 448
>gi|356550382|ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/478 (37%), Positives = 285/478 (59%), Gaps = 10/478 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
QVH Q++K ++ S +L+K+ +L + YA L+ + +++ +NT++R
Sbjct: 11 QVHGQVVKLGMGHKDAS-RKLSKVFTFAALSPFGDLNYARLLLSTNPTLNSYYYNTLLRA 69
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNS 162
+++ L + + PD+FT+P LLK C + K +H+L+ K F
Sbjct: 70 FSQTPLPTPPFHALSLFLSMPSPPDNFTFPFLLKCCSRSKLPPLGKQLHALLTK-LGFAP 128
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
++ L+ Y FGD+ A+ LFD+M ++VV+WT+MI G V E I+LF +M
Sbjct: 129 DLYIQNVLLHMYSEFGDLLLARSLFDRMPHRDVVSWTSMIGGLVNHDLPVEAINLFERML 188
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK--LGAALTDMYAKCGY 280
GVEVNE T++SVL ACA+ GA +G+ VH + + I ++ K + AL DMYAK G
Sbjct: 189 QCGVEVNEATVISVLRACADSGALSMGRKVHANLEEWGIEIHSKSNVSTALVDMYAKGGC 248
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
I A +VF V+ ++V W ++I GLA HG ++A+ MF M+ SG+KPD+ T+ AVLTA
Sbjct: 249 IASARKVFDDVVHRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVKPDERTVTAVLTA 308
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
C +AGLI +G +F +++R Y ++P+++H+GCLVDLL RA L EA + + MP+EP+ V
Sbjct: 309 CRNAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVNAMPIEPDTV 368
Query: 401 LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRR 460
LW +L+ AC D E +E + + + G+Y+L SN+YA+ +W + ++R
Sbjct: 369 LWRTLIWACKVHGDADRAERLMKHLE-IQDMRADDSGSYILASNVYASTGKWCNKAEVRE 427
Query: 461 LMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
LM ++ +VK PG S IE++ VHEF++GD HP +EEI+ L V +R+E Y R+
Sbjct: 428 LMNKKGLVKPPGTSRIEVDGGVHEFVMGDYNHPEAEEIFVELAEVVDKIRKEGYDPRV 485
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/515 (37%), Positives = 277/515 (53%), Gaps = 70/515 (13%)
Query: 70 KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP 129
+ I + N S I A F + NP+ FN +IRG + + Y M+ N + P
Sbjct: 15 QFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQALVHYMHMLRNNVMP 74
Query: 130 DSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG-------- 178
S+++ L+KAC D + VH V K F+S + T LI FY FG
Sbjct: 75 TSYSFSSLIKACTLLVDSAFGEAVHGHVWK-HGFDSHVFVQTTLIEFYSTFGDVGGSRRV 133
Query: 179 -----------------------DVKSAQLLFDQMTEKNVVTWTAMINGHVK-------- 207
D+ SA LFD+M EKNV TW AMI+G+ K
Sbjct: 134 FDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAE 193
Query: 208 -----------------------QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
K Y+E I LF + D G+ +E+T+ +V+SACA+LG
Sbjct: 194 FLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLG 253
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
A LGK VH ++ L+ +G++L DMYAKCG I+ AL VF + KN+ WN II
Sbjct: 254 ALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIID 313
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVE 364
GLA HG EEA++MF +M+ I+P+ VT I++LTAC+HAG IE+G+ F +M +DY +
Sbjct: 314 GLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIA 373
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIA 424
P V+HYGC+VDLL +A LL++A E+IRNM +EPN+ +WG+LL C N+E+A IA
Sbjct: 374 PQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHK---NLEIAHIA 430
Query: 425 MERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN-PGCSVIEINDVVH 483
++ L+ LEP N G+Y L+ N+YA + +W++ K+R MK+ + K PG S +EIN VH
Sbjct: 431 VQNLMVLEPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWVEINKTVH 490
Query: 484 EFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
F D HP +++ +L + LR Y +
Sbjct: 491 LFAASDTYHPSYSQLHLLLAELDDQLRLAGYVPEL 525
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 123/341 (36%), Gaps = 95/341 (27%)
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
+ + I+ N + A F + NV+ + A+I G V + + + M + V
Sbjct: 13 VNQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQALVHYMHMLRNNV 72
Query: 227 EVNELTLVSVLSACANLGASELGKWVHE-----------FVNKNCIILNDKLG------- 268
+ S++ AC L S G+ VH FV I G
Sbjct: 73 MPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGDVGGSRR 132
Query: 269 -------------AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
+ + + G + A R+F + EKNV TWN++I G G E A
Sbjct: 133 VFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESA 192
Query: 316 VKMF----------WQMQMS---------------------GIKPDDVTLIAVLTACSHA 344
+F W M+ G+ PD+VT+ V++AC+H
Sbjct: 193 EFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHL 252
Query: 345 GLIEKGKEI-FYNMRRDYKVE-----------------------------PNVKHYGCLV 374
G + GKE+ Y + + + ++ N+ + C++
Sbjct: 253 GALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCII 312
Query: 375 DLLCRARLLDEAYEVIRNMP---MEPNAVLWGSLLTACASA 412
D L ++EA + M + PNAV + S+LTAC A
Sbjct: 313 DGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHA 353
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 285/497 (57%), Gaps = 11/497 (2%)
Query: 22 KNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQI 81
+N +T + S H LL+ L +QVHA II + S + L KLI + + I
Sbjct: 19 RNFDTQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHR---SRSLLTKLISLVCTAGSI 75
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
YA +F + NP +F F+++++ ++ G + Y +M+ +G ++T+ ++KAC
Sbjct: 76 TYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKAC 135
Query: 142 GDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
DL R K +HS V+ + S ++ LI Y D+K A+ +FD M ++ ++ W
Sbjct: 136 ADLSALRLGKEIHSHVMVC-GYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAW 194
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
++I+G+ + +E I LF M +SG + + T+VS+LS+C+ LGA + G W+H++ +
Sbjct: 195 NSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADG 254
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
N LN LG +L +MY +CG + +A VF + E+NV TW ++I G +HG G +A+++
Sbjct: 255 NGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMEL 314
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
F +M+ G +P+++T +AVL+AC+H+GLI+ G+ +F +M+ Y + P V+H C+VD+
Sbjct: 315 FTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFG 374
Query: 379 RARLLDEAYEVIRN-MPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDG 437
RA LL++AY+ I+ +P EP +W S+L AC N +L E ++ +EP N G
Sbjct: 375 RAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMH---RNFDLGVKVAEHVLSVEPENPG 431
Query: 438 NYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEE 497
+YV++SNIYA + D +R +M R + K G S IEIN + F +GD HP +
Sbjct: 432 HYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNT 491
Query: 498 IYSMLEYVAISLREECY 514
IY L+ + E Y
Sbjct: 492 IYRYLDELMCRCSESGY 508
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 179/503 (35%), Positives = 283/503 (56%), Gaps = 54/503 (10%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIIN 93
L+++C +L + K +H I+K+ + +L+ S N + YA+ VF+ I
Sbjct: 25 LIEQCKNLKEIKIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASFNYANNVFHMIKY 84
Query: 94 PSTFAFNTVIRGYA------EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV 147
P +N +IR Y ++ ++ + LY QM+ G+ P++ T+P L+K C L Q
Sbjct: 85 PELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFPFLVKGCSRL-QY 143
Query: 148 KG-----VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
G +H+ V+K N V LI+ + NFG K+A+ +FD+M ++VV+W +M+
Sbjct: 144 GGTVGEVIHAHVLKFGFLNDVFVG-NSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMV 202
Query: 203 NGHVKQKNYREGIDLFRKMR-----------------------------------DSGVE 227
G+++ ++LFRKM D V+
Sbjct: 203 VGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVK 262
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+++T+ SVLSACA LG+ + GKWVH ++ KN I + +G AL +MY KCG +++A+ +
Sbjct: 263 PDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEI 322
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
F + EK+ W ++I A+HG G++A F +M+ +G+KP+ VT + +L+ACSH+GL+
Sbjct: 323 FNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLV 382
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
E+G+ F M+R Y +EP + HY C+VD+L RARL DEA +IR+MPM+P+ +WG+LL
Sbjct: 383 EQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLG 442
Query: 408 ACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
C N++L E LI LEP N Y+ + +IY ++D A ++R MKER I
Sbjct: 443 GCQMH---GNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGI 499
Query: 468 -VKNPGCSVIEINDVVHEFMVGD 489
K PGCS+IEIN VV EF VG+
Sbjct: 500 ETKIPGCSIIEINGVVQEFSVGE 522
>gi|357467943|ref|XP_003604256.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505311|gb|AES86453.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 670
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/427 (40%), Positives = 270/427 (63%), Gaps = 11/427 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A VF+ + ++ +I GY +AGL + + L+ +M + P++ T+ +L ACG
Sbjct: 238 ASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRM---DVAPNAATFVSILGACGK 294
Query: 144 LRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
L + KG+H LV K ++ S T L+ Y V A+ LFD++ EK++V+WT+
Sbjct: 295 LGCLNLGKGIHGLVSKYPHGKELVVSNT-LMDMYVKCESVTDAKRLFDEIPEKDIVSWTS 353
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
MI+G V+ + +E +DLF +M SG E + + L SVLSACA+LG + G+WVHE+++ +
Sbjct: 354 MISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSR 413
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
I + +G +L DMYAKCG IE A ++F ++ KN+ TWN+ IGGLAI+G G+EA+K F
Sbjct: 414 IKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFG 473
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR-DYKVEPNVKHYGCLVDLLCR 379
+ SG +P+++T +AV +AC H+GL+++G+ F M Y + P ++HYGC+VDLLCR
Sbjct: 474 YLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCR 533
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
A L++EA E+I MPM P+ + G+LL+A ++ NVEL ++ + E G Y
Sbjct: 534 AELVEEAMELINKMPMPPDVQIIGALLSASSTY---GNVELTPEMLKTVRNFECQESGVY 590
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
VL+SN YA +W + +RRLMKE+ I K PG S+I ++ H+F+VGD HP SE+I+
Sbjct: 591 VLLSNWYANNKKWAEVRSVRRLMKEKGISKAPGSSLIRVDGKSHKFVVGDNNHPQSEDIH 650
Query: 500 SMLEYVA 506
+L +A
Sbjct: 651 VLLNILA 657
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 199/381 (52%), Gaps = 12/381 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI-I 92
L +Q+C L FKQ+HAQ+++++ + + T+ A V + I Y Q
Sbjct: 88 LDFIQRCNDLRSFKQIHAQLLRSTLVDNDLVVTKAANFFGKHV--TDIRYPCNFLKQFDW 145
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKG 149
+ S+F N +I GY I++Y ++GNG PD +T P +LK+C + +VK
Sbjct: 146 SFSSFPCNLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQ 205
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H+L VK+ D + + Y GD A +FD M ++VV+WT +I+G++K
Sbjct: 206 IHTLAVKT-DLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAG 264
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ + + LF +M V N T VS+L AC LG LGK +H V+K +
Sbjct: 265 LFNDAVALFLRMD---VAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSN 321
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
L DMY KC + +A R+F + EK++ +W S+I GL + C +E++ +F++M SG +P
Sbjct: 322 TLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEP 381
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D V L +VL+AC+ GL++ G+ + + +++ +V L+D+ + ++ A ++
Sbjct: 382 DGVILTSVLSACASLGLLDYGRWVHEYIDHS-RIKWDVHIGTSLIDMYAKCGCIEMAQQM 440
Query: 390 IRNMPMEPNAVLWGSLLTACA 410
+P + N W + + A
Sbjct: 441 FNLLPSK-NIRTWNAYIGGLA 460
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 181/500 (36%), Positives = 286/500 (57%), Gaps = 14/500 (2%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
+ A S + +++ + Q +QVHA +I + S + L KLI ++ IA
Sbjct: 2 TTKVAANSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGR---SRSLLTKLITLACSARAIA 58
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG 142
Y HL+F + P F FN+VI+ ++ L + Y +M+ + + P ++T+ ++K+C
Sbjct: 59 YTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCA 118
Query: 143 DL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
DL R KGVH V S F + L+TFY GD++ A+ +FD+M EK++V W
Sbjct: 119 DLSALRIGKGVHCHAVVS-GFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWN 177
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
++++G + E I +F +MR+SG E + T VS+LSACA GA LG WVH+++
Sbjct: 178 SLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE 237
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ LN KLG AL ++Y++CG + +A VF + E NV W ++I HG G++AV++F
Sbjct: 238 GLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELF 297
Query: 320 WQMQMS-GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
+M+ G P++VT +AVL+AC+HAGL+E+G+ ++ M + Y++ P V+H+ C+VD+L
Sbjct: 298 NKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLG 357
Query: 379 RARLLDEAYEVIRNMPMEPNAV---LWGSLLTACASADDGANVELAEIAMERLIKLEPFN 435
RA LDEAY+ I + A LW ++L AC N +L +RLI LEP N
Sbjct: 358 RAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHR---NYDLGVEIAKRLIALEPDN 414
Query: 436 DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
G++V++SNIYA + D+ +R M N+ K G SVIE+ + + F +GD H +
Sbjct: 415 PGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQET 474
Query: 496 EEIYSMLEYVAISLREECYA 515
EIY LE + +E YA
Sbjct: 475 GEIYRYLETLISRCKEIGYA 494
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 181/505 (35%), Positives = 286/505 (56%), Gaps = 44/505 (8%)
Query: 34 LPLLQKCTHLVQFKQVHAQ-IIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
L LLQ L Q Q+H II SF + +T L++ + + ++ A+ VF Q+
Sbjct: 134 LFLLQASKFLSQVMQIHCHAIITGSFYYGYLQNT----LMKIYLENEKMGLAYQVFQQMA 189
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKG 149
P +FN +I GYA+ G ++ +M+G GL PD FT LL CG D + K
Sbjct: 190 APDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQLGKS 249
Query: 150 VHSLV---------------------VKSKD-------FNSVIH----SLTRLITFYCNF 177
VH+ + VK K+ FN ++ S +I Y
Sbjct: 250 VHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAKV 309
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
G+++ A F+ M +++V+W ++I G+ ++ + LF M + + +T+++++
Sbjct: 310 GNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIINLV 369
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
SA A +GA G+W+H +V + + ++ LG+A DMY KCG I+ A VF+ V EK+V
Sbjct: 370 SAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREVTEKDVT 429
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
W ++I G A HG G +A+++F++MQ + P+ VT +AVLTACSH+G + +G IF +M
Sbjct: 430 VWTTMITGFAFHGYGSKALQLFYEMQ-EYVMPNQVTFVAVLTACSHSGFVSQGLRIFNSM 488
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ Y +EP V+HYGCLVDLL R+ E +VI MPM+P+ +WG++L+AC + N
Sbjct: 489 KERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGAVLSACRAY---GN 545
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
+E+AEIA + L+KLEP +G YVL+SNIYA +W + K+R +M+ R + K GCS +
Sbjct: 546 IEIAEIAGKELLKLEPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGVKKTAGCSSVV 605
Query: 478 INDVVHEFMVGDGRHPCSEEIYSML 502
++ ++HEF+ D RHP EI S+L
Sbjct: 606 VDGIIHEFVAADKRHPRWIEIQSIL 630
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 200/424 (47%), Gaps = 46/424 (10%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF-N 89
H L LL+KC+ FKQ+ AQI++ + +T ++L L ++ + + A L+F +
Sbjct: 32 HATLILLEKCSTRDHFKQILAQIMRINLIGQTFPMSRLI-LFSAITHPENLDMAVLLFRH 90
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG 149
+P+ + +NT+I + + ++ Y ++ + + P+ T+ LL+A L QV
Sbjct: 91 HTPHPNLYIYNTMISALSLS--LNQSFAFYNSLLSSCIYPNRSTFLFLLQASKFLSQVMQ 148
Query: 150 V--HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ H+++ S + + ++L ++ Y + A +F QM + V++ MI G+ K
Sbjct: 149 IHCHAIITGSFYYGYLQNTLMKI---YLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAK 205
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK- 266
+ + E + +M G++ +E T++ +L C LG ++LGK VH ++ + +I +
Sbjct: 206 KGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNL 265
Query: 267 -LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF------ 319
L AL DMY KC + A +F +++ K+ +WN++I G A G E A F
Sbjct: 266 ILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCR 325
Query: 320 ----WQMQMSG---------------------IKPDDVTLIAVLTACSHAGLIEKGKEIF 354
W ++G I PD VT+I +++A + G + G+ I
Sbjct: 326 DLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWIH 385
Query: 355 -YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
+ +R K++ + +D+ + + A V R + E + +W +++T A
Sbjct: 386 GWVVRMQMKIDAFLG--SAFIDMYWKCGSIKRACMVFREVT-EKDVTVWTTMITGFAFHG 442
Query: 414 DGAN 417
G+
Sbjct: 443 YGSK 446
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/486 (35%), Positives = 283/486 (58%), Gaps = 22/486 (4%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L+ C+ L ++VH QI + F++ L L +I A+ VF +++
Sbjct: 179 VLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVAL---YAKCGEIVRANAVFGRLV 235
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKG 149
+ + ++ ++I GYA+ G ++++++M + PD +L+A DL K
Sbjct: 236 DRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKS 295
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H V+K L L + Y G V A+L F+Q+ +++ W AMI+G+VK
Sbjct: 296 IHGCVIK-MGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNG 354
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN----KNCIILND 265
E I+LFR M+ + + +T+ S ++ACA +G+ EL +W+ E+++ +N +I+N
Sbjct: 355 YAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVN- 413
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
+L D YAKCG ++ A VF + +K+V W++++ G +HG G E++ +F M+ +
Sbjct: 414 ---TSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQA 470
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G+ P+DVT + +LTAC ++GL+E+G ++F+ M RDY +EP +HY C+VDLL RA LD
Sbjct: 471 GVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRAGHLDR 529
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
AY + NMP+EP +WG+LL+AC +V L E A ERL L+P+N G+YV +SN+
Sbjct: 530 AYNFVMNMPIEPGVSVWGALLSACKIH---RHVTLGEYAAERLFSLDPYNTGHYVQLSNL 586
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
YA+ WD K+R LM+E+ + K+ G SVIEIN + F GD HP S+EI+ +E +
Sbjct: 587 YASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDL 646
Query: 506 AISLRE 511
L+E
Sbjct: 647 ERRLKE 652
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 217/460 (47%), Gaps = 26/460 (5%)
Query: 12 THFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKL 71
THF N+ + N +T + L+ H Q++A+++ +AKL
Sbjct: 58 THFNNNKDD-CNESTFKPDKFYASLIDDSIHKTHLNQIYAKLLVTGLQ---YGGFLIAKL 113
Query: 72 IESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS 131
+ N +++ A +F++ +P F +N ++R Y+ G I++Y +M + PD
Sbjct: 114 VNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDG 173
Query: 132 FTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
F++P +LKAC L + + VH + + F S + L+ Y G++ A +F
Sbjct: 174 FSFPCVLKACSALPALEMGRRVHGQIFR-HGFESDVFVQNGLVALYAKCGEIVRANAVFG 232
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
++ ++ +V+WT++I+G+ + E + +F +MR + V + + LVSVL A ++ E
Sbjct: 233 RLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEH 292
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
GK +H V K + L +LT +YAKCG++ A F V ++ WN++I G
Sbjct: 293 GKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVK 352
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-----FYNMRRDYKV 363
+G EEA+++F M+ I+PD +T+ + + AC+ G +E + + R D V
Sbjct: 353 NGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIV 412
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
+ L+D + +D A V +P + + V+W +++ G +
Sbjct: 413 NTS------LIDTYAKCGSVDMARFVFDRIP-DKDVVVWSAMMVGYGLHGQGRESIILFH 465
Query: 424 AMERLIKLEPFNDGNYVLM----SNIYAAKAQWDDAGKMR 459
AM R + P ND +V + N + WD +MR
Sbjct: 466 AM-RQAGVSP-NDVTFVGLLTACKNSGLVEEGWDLFHRMR 503
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/437 (38%), Positives = 260/437 (59%), Gaps = 10/437 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY----PILLK 139
++F+QI P ++N +I GY + L+ +++ +G +S T P+ L
Sbjct: 268 GRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLP 327
Query: 140 ACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
L+ + + +L +K S T L T YC +V+ A+ LFD+ EK++ +W
Sbjct: 328 -FNHLQLSRLIQNLSLKIGIILQPSVS-TALTTVYCRLNEVQFARQLFDESPEKSLASWN 385
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
AMI+G+ + I LF++M + N +T+ S+LSACA LGA +GKWVH +
Sbjct: 386 AMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSE 444
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ N + AL DMYAKCG I EA ++F ++++KNV TWN++I G +HG G+EA+K+F
Sbjct: 445 RLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLF 504
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
++M SGI P VT +++L ACSH+GL+ +G EIF++M +Y +P +HY C+VD+L R
Sbjct: 505 YEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGR 564
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
A L A E I MP+EP +WG+LL AC N E+A +A +RL +L+P N G Y
Sbjct: 565 AGQLTNALEFIERMPLEPGPAVWGALLGACMIHK---NTEMANVASKRLFQLDPENVGYY 621
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
VL+SNIY+ + A +R+++K+R + K PGC++IEI+D + F GD HP + I+
Sbjct: 622 VLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIF 681
Query: 500 SMLEYVAISLREECYAA 516
MLE + +RE Y A
Sbjct: 682 EMLEKLTGKMREAGYQA 698
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 172/328 (52%), Gaps = 7/328 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A VF+ + T +NT+I G++ I+++ M+ GL DS T +L A +
Sbjct: 167 ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAE 226
Query: 144 LRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
L++ + G+ L K K +S ++ LT LI+ Y G ++LFDQ+ + +++++ A
Sbjct: 227 LQEYRLGMGIQCLASK-KGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNA 285
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
MI+G+ + LFR++ SG VN TLV ++ +L + + K
Sbjct: 286 MISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
IIL + ALT +Y + ++ A ++F EK++ +WN++I G +G + A+ +F
Sbjct: 346 IILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQ 405
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M M + P+ VT+ ++L+AC+ G + GK + + + + ++E NV LVD+ +
Sbjct: 406 EM-MPQLSPNPVTVTSILSACAQLGALSIGKWV-HGLIKSERLESNVYVSTALVDMYAKC 463
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+ EA ++ ++ ++ N V W +++T
Sbjct: 464 GSIVEARQLF-DLMVDKNVVTWNAMITG 490
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 219/502 (43%), Gaps = 80/502 (15%)
Query: 24 SNTATKS----HHHLPLLQKCTHLVQFKQVHAQII--KASFDNRTISDTQLAKLIESLVN 77
+NTAT + L LL T L Q Q+ AQ+I +D +I+ KL +
Sbjct: 4 TNTATSAIRGQRFFLTLLNNATTLSQLLQIQAQLILHGIHYDLSSIT-----KLTHKFFD 58
Query: 78 SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDPDSFTYPI 136
+A+ +FN++ P F FN +IRG+++ GL I LYT + L PD+FTY
Sbjct: 59 LGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAF 118
Query: 137 LLKACGDLRQVK-GV----HSLV--VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
+ A L + GV HS+V V S F + ++ Y F + A+ +FD
Sbjct: 119 AISAASRLEDERVGVLLHAHSIVDGVASNLFVG-----SAIVDLYFKFTRAELARKVFDV 173
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
M E++ V W MI+G + + + I +F M D G+ + TL +VL+A A L LG
Sbjct: 174 MPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLG 233
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
+ +K + + + L +Y+KCG + +F + + ++ ++N++I G +
Sbjct: 234 MGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFN 293
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLI---------------------------------- 335
E AV +F ++ SG + + TL+
Sbjct: 294 HETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVS 353
Query: 336 -AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM- 393
A+ T ++ +++F D E ++ + ++ + L D A + + M
Sbjct: 354 TALTTVYCRLNEVQFARQLF-----DESPEKSLASWNAMISGYTQNGLTDRAISLFQEMM 408
Query: 394 -PMEPNAVLWGSLLTACASADDGANVELAEIAMER----LIKLEPFNDGNYV--LMSNIY 446
+ PN V S+L+ACA +L +++ + LIK E YV + ++Y
Sbjct: 409 PQLSPNPVTVTSILSACA--------QLGALSIGKWVHGLIKSERLESNVYVSTALVDMY 460
Query: 447 AAKAQWDDAGKMRRLMKERNIV 468
A +A ++ LM ++N+V
Sbjct: 461 AKCGSIVEARQLFDLMVDKNVV 482
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/437 (38%), Positives = 260/437 (59%), Gaps = 10/437 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY----PILLK 139
++F+QI P ++N +I GY + L+ +++ +G +S T P+ L
Sbjct: 268 GRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLP 327
Query: 140 ACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
L+ + + +L +K S T L T YC +V+ A+ LFD+ EK++ +W
Sbjct: 328 -FNHLQLSRLIQNLSLKIGIILQPSVS-TALTTVYCRLNEVQFARQLFDESPEKSLASWN 385
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
AMI+G+ + I LF++M + N +T+ S+LSACA LGA +GKWVH +
Sbjct: 386 AMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSE 444
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ N + AL DMYAKCG I EA ++F ++++KNV TWN++I G +HG G+EA+K+F
Sbjct: 445 RLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLF 504
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
++M SGI P VT +++L ACSH+GL+ +G EIF++M +Y +P +HY C+VD+L R
Sbjct: 505 YEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGR 564
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
A L A E I MP+EP +WG+LL AC N E+A +A +RL +L+P N G Y
Sbjct: 565 AGQLTNALEFIERMPLEPGPAVWGALLGACMIHK---NTEMANVASKRLFQLDPENVGYY 621
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
VL+SNIY+ + A +R+++K+R + K PGC++IEI+D + F GD HP + I+
Sbjct: 622 VLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIF 681
Query: 500 SMLEYVAISLREECYAA 516
MLE + +RE Y A
Sbjct: 682 EMLEKLTGKMREAGYQA 698
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 172/328 (52%), Gaps = 7/328 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A VF+ + T +NT+I G++ I+++ M+ GL DS T +L A +
Sbjct: 167 ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAE 226
Query: 144 LRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
L++ + G+ L K K +S ++ LT LI+ Y G ++LFDQ+ + +++++ A
Sbjct: 227 LQEYRLGMGIQCLASK-KGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNA 285
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
MI+G+ + LFR++ SG VN TLV ++ +L + + K
Sbjct: 286 MISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
IIL + ALT +Y + ++ A ++F EK++ +WN++I G +G + A+ +F
Sbjct: 346 IILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQ 405
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M M + P+ VT+ ++L+AC+ G + GK + + + + ++E NV LVD+ +
Sbjct: 406 EM-MPQLSPNPVTVTSILSACAQLGALSIGKWV-HGLIKSERLESNVYVSTALVDMYAKC 463
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+ EA ++ ++ ++ N V W +++T
Sbjct: 464 GSIVEARQLF-DLMVDKNVVTWNAMITG 490
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 219/502 (43%), Gaps = 80/502 (15%)
Query: 24 SNTATKS----HHHLPLLQKCTHLVQFKQVHAQII--KASFDNRTISDTQLAKLIESLVN 77
+NTAT + L LL T L Q Q+ AQ+I +D +I+ KL +
Sbjct: 4 TNTATSAIRGQRFFLTLLNNATTLSQLLQIQAQLILHGIHYDLSSIT-----KLTHKFFD 58
Query: 78 SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDPDSFTYPI 136
+A+ +FN++ P F FN +IRG+++ GL I LYT + L PD+FTY
Sbjct: 59 LGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAF 118
Query: 137 LLKACGDLRQVK-GV----HSLV--VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
+ A L + GV HS+V V S F + ++ Y F + A+ +FD
Sbjct: 119 AISAASRLEDERVGVLLHAHSIVDGVASNLFVG-----SAIVDLYFKFTRAELARKVFDV 173
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
M E++ V W MI+G + + + I +F M D G+ + TL +VL+A A L LG
Sbjct: 174 MPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLG 233
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
+ +K + + + L +Y+KCG + +F + + ++ ++N++I G +
Sbjct: 234 MGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFN 293
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLI---------------------------------- 335
E AV +F ++ SG + + TL+
Sbjct: 294 HETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVS 353
Query: 336 -AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM- 393
A+ T ++ +++F D E ++ + ++ + L D A + + M
Sbjct: 354 TALTTVYCRLNEVQFARQLF-----DESPEKSLASWNAMISGYTQNGLTDRAISLFQEMM 408
Query: 394 -PMEPNAVLWGSLLTACASADDGANVELAEIAMER----LIKLEPFNDGNYV--LMSNIY 446
+ PN V S+L+ACA +L +++ + LIK E YV + ++Y
Sbjct: 409 PQLSPNPVTVTSILSACA--------QLGALSIGKWVHGLIKSERLESNVYVSTALVDMY 460
Query: 447 AAKAQWDDAGKMRRLMKERNIV 468
A +A ++ LM ++N+V
Sbjct: 461 AKCGSIVEARQLFDLMVDKNVV 482
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 266/442 (60%), Gaps = 8/442 (1%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI S + A +F+ + ++ ++N++I YA G + L+ QM+ G P+
Sbjct: 246 LITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPN 305
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
+ T + C GDL + + + + N ++H T L+ Y + A+ F
Sbjct: 306 AITITTVFSICAKTGDLDTGRRARAWIREEDLQNVIVH--TALMEMYVKCRAIDEARHEF 363
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
D+M ++VV W+ MI G+ + E ++LF +M+ + + NE+TLV VLSACA LG+ E
Sbjct: 364 DRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDE 423
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
LG+ + ++ + L LG+AL DMY KCG++ A VF + +K V TWNS+I GLA
Sbjct: 424 LGEQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLA 483
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
++G E+A+ ++ +M GI+P++VT +A+LTAC+HAGL++KG F M++ V P V
Sbjct: 484 LNGFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQV 543
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+H C+VDLLC++ L EAY+ I +M +EPNAV+W +LL+AC + A+VELA++A +
Sbjct: 544 EHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRA---HADVELAKLAAGK 600
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L+ LEP N YVL+SNIYA W D ++R LM+ +N+ K S IE++ VH F+V
Sbjct: 601 LVALEPNNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLV 660
Query: 488 GDGRHPCSEEIYSMLEYVAISL 509
D HP S EIY++++ + + L
Sbjct: 661 QDTYHPRSAEIYNVVDGLGLQL 682
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 173/390 (44%), Gaps = 58/390 (14%)
Query: 68 LAKLIES------LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQ 121
LA+L+++ L N+S A +F+ + P+ + G ++ L I++ +
Sbjct: 105 LARLLKTRPLHALLSNASTYRAARHLFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSS 164
Query: 122 MIGNGLDPDSFTYPILLKACG-DLRQVKG----VHSLVVKSKDFNSVIHSLTRLITFYCN 176
+ G S P++LK+C +G H+LV + + T L+ FY
Sbjct: 165 LHRRGGAIPSGCIPLVLKSCAQSAASCQGSQTHCHALV---RGMLGDVFVQTALVDFYAK 221
Query: 177 FG-------------------------------DVKSAQLLFDQMTEKNVVTWTAMINGH 205
G DV+ A+ LFD M + +W +MI +
Sbjct: 222 NGDMDSALMAFKEMPVKDPIPMNCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACY 281
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK----WVHEFVNKNCI 261
+RE + LF +M G N +T+ +V S CA G + G+ W+ E +N I
Sbjct: 282 AHGGEFREALTLFDQMLREGASPNAITITTVFSICAKTGDLDTGRRARAWIREEDLQNVI 341
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
+ AL +MY KC I+EA F + ++V W+++I G + +G E++++F +
Sbjct: 342 V-----HTALMEMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFER 396
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG-CLVDLLCRA 380
M+ + KP++VTL+ VL+AC+ G E G++I + + + P + G L+D+ +
Sbjct: 397 MKATNCKPNEVTLVGVLSACAQLGSDELGEQIGNYI--ESQTLPLTSYLGSALIDMYTKC 454
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ A V M + V W S++ A
Sbjct: 455 GHVARARSVFNRMEQK-VVVTWNSMIRGLA 483
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 285/520 (54%), Gaps = 51/520 (9%)
Query: 40 CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAF 99
C + + KQ+H QII F + L KL+ + S + AH VF +I NPST +
Sbjct: 44 CDTIKKLKQIHTQIIVNGFSQKNF---LLVKLLSFYITSGNLLNAHKVFERIENPSTTVW 100
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVK 156
N +IRG++++ H+ ++LY +M+ +P+ FTY L+ C LR+ + VH VV
Sbjct: 101 NQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVA 160
Query: 157 S-----------------------------KDFNSVIH----SLTRLITFYCNFGDVKSA 183
+ + F+ ++ S L+ Y GDV A
Sbjct: 161 NGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGA 220
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
+ +FD+M E+NVV+WT MI G + ++ + LF +MR +GV+++++ LV+ LSACA L
Sbjct: 221 RRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAEL 280
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTD----MYAKCGYIEEALRVFKIVLEKNVCTW 299
G +LG W+H ++++ N L +L + MYA CG I++A +VF + +++ +W
Sbjct: 281 GDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISW 340
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGI---KPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
S+I G A G EEA+ +F MQ G +PD +T I VL ACSHAG +++G+ F
Sbjct: 341 TSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFEC 400
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
M + + + P ++HYGC+VDLL RA LDEA+ + +MPM+PN +WG+LL C
Sbjct: 401 MNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGALLGGCRIHK--- 457
Query: 417 NVELAE-IAMERLIKLEPFNDGNY-VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
N ELA +A + +++L+P Y VL+SN+YA +W D +R+ M E + K G S
Sbjct: 458 NAELASHVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRS 517
Query: 475 VIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
++IN VVH+F+ GD H + +Y ML + + E Y
Sbjct: 518 WVQINGVVHDFVAGDWTHKHASSVYEMLSKITRQAKLEGY 557
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 254/436 (58%), Gaps = 10/436 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL---KA 140
A +F+++ P +N +I GY+ G+ ++L+ +++G GL P S T L+
Sbjct: 275 ARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSP 334
Query: 141 CGDLRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
G +H+ VVK+ D N+ + T L T YC F D+ SA+ FD M EK + +W
Sbjct: 335 FGHEPLAGCLHAHVVKAGLDANAPVS--TALTTLYCRFNDMDSARRAFDAMPEKTMESWN 392
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
AMI+G+ + + LF++M+ V N LT+ S LSACA LGA LGKWVH+ +
Sbjct: 393 AMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANE 452
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ LN + AL DMY KCG I EA +F + KNV +WN +I G +HG G EA+K++
Sbjct: 453 KLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLY 512
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
M + + P T ++VL ACSH GL+++G +F +M DY + P ++H C+VDLL R
Sbjct: 513 KDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGR 572
Query: 380 ARLLDEAYEVIRNMPMEP-NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGN 438
A L EA+E+I P +WG+LL AC DG +LA++A ++L +LEP N G
Sbjct: 573 AGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDG---DLAKLASQKLFELEPENTGY 629
Query: 439 YVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
YVL+SN+Y +K Q+ +A +R+ K R +VK PGC++IEI D H FM GD HP S+ I
Sbjct: 630 YVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAI 689
Query: 499 YSMLEYVAISLREECY 514
Y LE + + E Y
Sbjct: 690 YLYLEKLTAKMIEAGY 705
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 187/375 (49%), Gaps = 14/375 (3%)
Query: 46 FKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
+ +HA + + F + LAKL +L + A VF+ + +P T +NT++ G
Sbjct: 142 LRPLHALAVASGFAADNFVASALAKLYFTLSRGND---ARKVFDAVPSPDTVLWNTLLAG 198
Query: 106 YAEAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFN 161
+ G ++ + +M G G + PDS T +L A ++ + VH+ K
Sbjct: 199 LS----GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKC-GLA 253
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
H +T LI+ Y GD++ A+ LFD+M ++VT+ A+I+G+ ++LF+++
Sbjct: 254 QHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKEL 313
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
G+ + TLV+++ + G L +H V K + N + ALT +Y + +
Sbjct: 314 VGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDM 373
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
+ A R F + EK + +WN++I G A +G E AV +F QMQ ++P+ +T+ + L+AC
Sbjct: 374 DSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSAC 433
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
+ G + GK + + + + K+E NV L+D+ + + EA + +M + N V
Sbjct: 434 AQLGALSLGKWV-HKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNK-NVVS 491
Query: 402 WGSLLTACASADDGA 416
W +++ GA
Sbjct: 492 WNVMISGYGLHGQGA 506
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 5/148 (3%)
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL 127
+ LI+ V IA A +F+ + N + ++N +I GY G G ++LY M+ L
Sbjct: 461 MTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHL 520
Query: 128 DPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQ 184
P S T+ +L AC G +++ V + I T ++ G +K A
Sbjct: 521 HPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAF 580
Query: 185 LLFDQMTEKNVVT--WTAMINGHVKQKN 210
L + + V W A++ + K+
Sbjct: 581 ELISEFPKSAVGPGIWGALLGACMVHKD 608
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/454 (36%), Positives = 262/454 (57%), Gaps = 42/454 (9%)
Query: 55 KASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
K FD T D + ++V ++ A +F+++ T ++NT++ GYA+AG
Sbjct: 256 KKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAE 315
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
+ +L+ +M G + S + +++
Sbjct: 316 KAFELFQRMPGRN-------------------------------------VVSWSTVVSA 338
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
YC GD++ A+++FD+M KN+VTWT M++ ++ E LF +M D+ +E++ + +
Sbjct: 339 YCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAV 398
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI-VL 292
VS+L+ACA G+ LGK +H V + + + + AL DM+ KCG + A +F ++
Sbjct: 399 VSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIV 458
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
EK++ +WN IIGG A+HG GE+A+++F QM+ G PD VTLI VL+AC+H GL+E+G+
Sbjct: 459 EKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRR 518
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
F NM DY ++P ++HYGC+VDLL R L+ EA ++I+ MP EPN V+WGSLL+AC
Sbjct: 519 FFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLH 578
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
NVE AE+A+ L L+P + GNY ++SNIYA +W D K R MK K G
Sbjct: 579 K---NVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAG 635
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
S IE+N+ HEF VGD +HP S++I M++ ++
Sbjct: 636 SSWIELNEAFHEFTVGDRKHPESDQISDMIDRLS 669
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/500 (36%), Positives = 286/500 (57%), Gaps = 14/500 (2%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
+ A S + +++ + Q +QVHA +I S+ S + L KLI ++ IA
Sbjct: 2 TTKVAANSAAYEAIVRAGPRVKQLQQVHAHLIVTSYGR---SRSLLTKLITLACSARAIA 58
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG 142
Y HL+F + P F FN+VI+ ++ L + Y +M+ + + P ++T+ ++K+C
Sbjct: 59 YTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCA 118
Query: 143 DLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
DL +K GVH V S F + L+TFY GD+++A+ +FD+M EK+VV W
Sbjct: 119 DLSALKIGKGVHCHAVVS-GFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWN 177
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
++++G + + I +F +MR+SG E + T VS+LSACA GA LG WVH+++
Sbjct: 178 SLVSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSE 237
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ +N KLG AL ++Y++CG + +A VF + E NV W ++I HG G++AV +F
Sbjct: 238 GLDVNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLF 297
Query: 320 WQMQMS-GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
+M+ G P++VT +AVL+AC+HAGL+E G+ ++ M Y++ P V+H+ C+VD+L
Sbjct: 298 NKMEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLG 357
Query: 379 RARLLDEAYEVIRNMPMEPNAV---LWGSLLTACASADDGANVELAEIAMERLIKLEPFN 435
RA LDEAY I+ + NA LW ++L AC N +L +RLI LEP N
Sbjct: 358 RAGFLDEAYRFIQQLDATGNATAPALWTAMLGACKMHR---NYDLGVEIAKRLIALEPEN 414
Query: 436 DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
G++V++SNIYA + D+ +R M N+ K G S+IE+ + + F +GD H +
Sbjct: 415 PGHHVMLSNIYALSGKTDEVSHIRDRMMRNNLRKQVGYSIIEVENKTYLFSMGDESHQET 474
Query: 496 EEIYSMLEYVAISLREECYA 515
EIY LE + +E YA
Sbjct: 475 GEIYRYLETLISRCKEIGYA 494
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 284/504 (56%), Gaps = 12/504 (2%)
Query: 18 ANSHKNSNTATKSHHHLPLLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIES 74
A S ++ H PLL K ++ + Q +A I+K D L + +
Sbjct: 91 AYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPFQFYAHIVKFGLDFDAFVQNSL---VSA 147
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
+ + + +F + ++ +I G G ++ + +M +G++ D T
Sbjct: 148 FAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTV 207
Query: 135 PILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
+L A LR V + VH V+S ++ + L+ Y G A +F++M
Sbjct: 208 VSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMP 267
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+N+V+W A+I G+V+ Y+E + +F++M G+E N+ T+ S L+ACA LG+ + G+W
Sbjct: 268 TRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRW 327
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+HE+V+++ + LN KLG AL DMY+KCG ++EAL VF+ + K+V W ++I GLA+ G
Sbjct: 328 LHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGD 387
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
++ +F QM S ++P+ VT + VL+AC+H GL+++G E+F M DY++EPNV HYG
Sbjct: 388 ALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYG 447
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VDLL RA L+EA + I +MPMEP +WG+L + C EL E LIKL
Sbjct: 448 CMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHK---AFELGEHIGNHLIKL 504
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
+P + G Y+L++N+Y+ +W+ A +RRLMK + + K+P CS IE+N V+HEF+ D
Sbjct: 505 QPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPACSWIEVNGVIHEFIAFDKS 564
Query: 492 HPCSEEIYSMLEYVAISLREECYA 515
H S +Y ML V L+ YA
Sbjct: 565 HIESINVYMMLGSVTAQLKLATYA 588
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 216/393 (54%), Gaps = 13/393 (3%)
Query: 27 ATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL 86
AT H L KC Q + +I + + T L+ L+ S + + Y L
Sbjct: 5 ATLRHSILCCFHKCGTFDHLNQTTSILITSGLAHHTFF---LSDLLRS--ATKDLGYTLL 59
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
+F+++ P F +NT++R ++ + + Y+++ +G+ PD T+P+LLKA LR
Sbjct: 60 LFDRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 147 VKG--VHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
++ +VK DF++ + + L++ + + G V ++ LF + +K+VV+WTA+IN
Sbjct: 120 ENPFQFYAHIVKFGLDFDAFVQN--SLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALIN 177
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF-VNKNCII 262
G ++ E ++ F +MR SGVEV+E+T+VSVL A A L G+WVH F V +I
Sbjct: 178 GCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVI 237
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
+ +G+AL DMY+KCGY ++A++VF + +N+ +W ++I G +EA+K+F +M
Sbjct: 238 WDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEM 297
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
+ GI+P+ T+ + LTAC+ G +++G+ + + R K+ N K LVD+ +
Sbjct: 298 IIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRS-KLGLNSKLGTALVDMYSKCGC 356
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+DEA V +P + + W +++ A D
Sbjct: 357 VDEALLVFEKLPAK-DVYPWTAMINGLAMRGDA 388
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 181/465 (38%), Positives = 276/465 (59%), Gaps = 42/465 (9%)
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAG--------LGHRGIQLYTQMIGNG------ 126
+ YA +F+QI +P+ +N++ RGYA++ + R + +T MI NG
Sbjct: 1 MTYARQLFDQIPDPNIALWNSMFRGYAQSESYREIFCEMFERNVVAWTSMI-NGYILSAD 59
Query: 127 ---------LDP--DSFTYPILLKA---CGDLRQVKGV-HSLVVKSKDF-NSVIHSLTRL 170
L P D + I++ GD+ + + + H + + F N+V+
Sbjct: 60 LVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKG---- 115
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-RDSGVEVN 229
Y G+V++ + LF++M E+N+ +W A+I G+ + E + F++M +S V N
Sbjct: 116 ---YATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPN 172
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
+ TLV+VLSACA LGA +LGKWVH + + + N +G AL DMYAKCG IE A+ VF+
Sbjct: 173 DATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFR 232
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ K++ +WN++IGGLA+H G +A+ +F+QM+ +G KPD +T I +L AC+H GL+E
Sbjct: 233 GMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVED 292
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
G F +M DY + P ++HYGC+VD+L RA L++A +R MP+E + V+W LL AC
Sbjct: 293 GFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGAC 352
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
NVELAE+A++RLI+LEP N NYV++SNIY +W+D +++ M++ K
Sbjct: 353 RIYK---NVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKK 409
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
PGCS+IE+ND V EF D RHP EEIY +L + LR Y
Sbjct: 410 LPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGY 454
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 180/514 (35%), Positives = 299/514 (58%), Gaps = 42/514 (8%)
Query: 27 ATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL 86
++ S L LL KC ++ Q KQ HAQ++K+ N ++L N S +++A
Sbjct: 2 SSSSKRCLLLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGS-LSHAFK 60
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
+F I +P+ FNT+I+ G I +++ + NG+ PD++T P +LKA +
Sbjct: 61 LFQHIQHPTICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTN 120
Query: 147 V---KGVH----------------SLVVKSKDFNSVIH--------------SLTRLITF 173
+ + +H SL+V + F+++ S T +I
Sbjct: 121 IHLGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYG 180
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y N GDV +A+ LFD T K+ W AMI+G+V+ ++EG+ +FR M+ + VE +E +
Sbjct: 181 YANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAII 240
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
V++LSACA++GA + G W+H ++ + + L ++ L DMYAKCG+++ A +F + +
Sbjct: 241 VTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQ 300
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
++ WN++I G+A+ G GE A+K+F +M+ +GIKPD++T IAVL ACS++G++++G I
Sbjct: 301 RDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRI 360
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN----AVLWGSLLTAC 409
+ M +K+EP +HYGC++DLL R +EA VI+ +P + AV W + L+AC
Sbjct: 361 WNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSAC 420
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
+ AE+A ERL +LE + G YVL+SN+YAA + +DA ++R +MK + + K
Sbjct: 421 CKH---GQTQQAEVAAERLFQLER-HSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEK 476
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
PGCS I++N VV+EF+ G+ H + I+ +LE
Sbjct: 477 VPGCSSIKVNGVVNEFIAGEKTHRHIDNIHLVLE 510
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 184/507 (36%), Positives = 303/507 (59%), Gaps = 22/507 (4%)
Query: 22 KNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKL--IESLVNSS 79
K N+ T L LL CT L + KQ+HAQ I+ +F S +++ + SL++
Sbjct: 17 KGENSKTHQSRFLHLLTDCTDLSKLKQIHAQAIR-NFSTHNSSLFLYSRILHVSSLID-- 73
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEA-GLGHRGIQLYTQMIGNG-LDPDSFTYPIL 137
YA VFNQI NP++F +NT+I A + + I+++ +M+ G ++PD T+P L
Sbjct: 74 -FDYACRVFNQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFL 132
Query: 138 LKACG---DLRQVKGVHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
LKAC L + + H+ + K D + ++ LI Y + G + A +F++M +
Sbjct: 133 LKACAYVFALSEGRQAHAQIFKLGLDLD--VYVGNSLIHLYASCGCLSMALKVFEKMPLR 190
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
++V+W MI+ +V+ + + LF +M++S E + T+ S++SACA +GA LG W H
Sbjct: 191 SLVSWNVMIDAYVQSGLFENALKLFVEMQNS-FEPDGYTMQSIVSACAGIGALSLGMWAH 249
Query: 254 EFVNKNC--IILNDKL-GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
+V + + D L ++L DMY+KCG + A +VF+ + + ++ +WNS+I LA+HG
Sbjct: 250 AYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHG 309
Query: 311 CGEEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
G+ A++ F ++ +M P+ VT + VL+AC+H G++ G++ F M DYK+EP ++H
Sbjct: 310 RGQAALQCFSRLVEMEKFLPNSVTFVGVLSACNHGGMVADGRKYFDMMVNDYKIEPRLEH 369
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA-EIAMERL 428
YGCLVDLL R+ +DEA E++ NM ++P+AV+W SLL AC + G VEL+ E+A + L
Sbjct: 370 YGCLVDLLSRSGFIDEALELVANMHIKPDAVIWRSLLDACYKQNAG--VELSEEVAFKIL 427
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
+ + G YV++S +YA+ QW+D G +R++M + + K PGCS IEI+ + HEF G
Sbjct: 428 QSEKTISSGVYVMLSRVYASARQWNDVGIIRKVMTDMGVTKEPGCSSIEIDGISHEFFAG 487
Query: 489 DGRHPCSEEIYSMLEYVAISLREECYA 515
D HP +EIY +++ + L Y+
Sbjct: 488 DTSHPRIKEIYGVIDLIEEKLERRGYS 514
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 181/519 (34%), Positives = 288/519 (55%), Gaps = 13/519 (2%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDN 60
+L L + L F ++ + +T L + +H+ + VH +K
Sbjct: 186 LLAGLPGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAE 245
Query: 61 RTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYT 120
T L L + A +F+++ NP A+N +I GY+ G+ ++L+
Sbjct: 246 HEHVVTGLMSLYS---KCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFK 302
Query: 121 QMIGNGLDPDSFTYPILLKACGDLRQ---VKGVHSLVVKSK-DFNSVIHSLTRLITFYCN 176
++ +G P+S T ++ + +H+ VVK++ D ++++ T L T YC
Sbjct: 303 ELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVS--TALTTLYCR 360
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
D++SA+ +FD M EK + +W AMI+G+ + + LF+ M++ V+ N +T+ S
Sbjct: 361 LNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISST 420
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
LSACA+LGA LGKWVH ++K + LN + AL DMYAKCG I EA +F + KNV
Sbjct: 421 LSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNV 480
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
+WN++I G +HG G EA+K++ M + I P T ++V+ ACSH GL+++G+++F
Sbjct: 481 VSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRV 540
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP-NAVLWGSLLTACASADDG 415
M +Y++ P ++H C+VDLL RA L+EA E+I P +WG+LL AC
Sbjct: 541 MTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHK-- 598
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
N +LA++A ++L +L+ N G YVL+SN+Y +K + +A +R+ K R +VK PGC++
Sbjct: 599 -NSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTL 657
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
IEI D H FM GD HP SE IYS LE + + E Y
Sbjct: 658 IEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGY 696
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 186/374 (49%), Gaps = 14/374 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+ +H + A + T + LAKL L A VF+ + +P T +NT++ G
Sbjct: 134 RTLHGLSVAAGYAADTFVASALAKLYFKLSRGDD---ARKVFDTVPSPDTILWNTLLAGL 190
Query: 107 AEAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNS 162
G ++ + +M+ G + PDS T L+A + + + VH VK
Sbjct: 191 P----GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKC-GLAE 245
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
H +T L++ Y GD+ SAQ LFD+M ++V + A+I+G+ ++LF+++
Sbjct: 246 HEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELT 305
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
SG N TLV+V+ + G L + +H FV K + + + ALT +Y + +E
Sbjct: 306 ASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDME 365
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A +F +LEK + +WN++I G A +G E AV +F MQ ++P+ +T+ + L+AC+
Sbjct: 366 SARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACA 425
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
H G + GK + + ++ K+E NV L+D+ + + EA + M + N V W
Sbjct: 426 HLGALSLGKWVHRIISKE-KLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNK-NVVSW 483
Query: 403 GSLLTACASADDGA 416
++++ GA
Sbjct: 484 NAMISGYGLHGQGA 497
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 167/454 (36%), Positives = 262/454 (57%), Gaps = 42/454 (9%)
Query: 55 KASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
K FD T D + ++V ++ A +F+++ T ++NT++ GYA+AG
Sbjct: 184 KKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAE 243
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
+ +L+ +M G + S + +++
Sbjct: 244 KAFELFQRMPGRN-------------------------------------VVSWSTVVSA 266
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
YC GD++ A+++FD+M KN+VTWT M++ ++ E LF +M D+ +E++ + +
Sbjct: 267 YCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAV 326
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI-VL 292
VS+L+ACA G+ LGK +H V + + + + AL DM+ KCG + A +F ++
Sbjct: 327 VSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIV 386
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
EK++ +WN IIGG A+HG GE+A+++F QM+ G PD VTLI VL+AC+H GL+E+G+
Sbjct: 387 EKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRR 446
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
F NM DY ++P ++HYGC+VDLL R L+ EA ++I+ MP EPN V+WGSLL+AC
Sbjct: 447 FFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLH 506
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
NVE AE+A+ L L+P + GNY ++SNIYA +W D K R MK K G
Sbjct: 507 K---NVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAG 563
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
S IE+N+ HEF VGD +HP S++I M++ ++
Sbjct: 564 SSWIELNEAFHEFTVGDRKHPESDQISDMIDRLS 597
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 171/456 (37%), Positives = 261/456 (57%), Gaps = 9/456 (1%)
Query: 65 DTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
D L LI + A L+F +I P A+N +I G+ G ++L+ +++
Sbjct: 244 DYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLF 303
Query: 125 NGLDPDSFTYPILL---KACGDLRQVKGVHSLVVKSKD-FNSVIHSLTRLITFYCNFGDV 180
+G S T L+ G L +H VKS N + T Y ++
Sbjct: 304 SGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVS--TAFTAIYNKLNEI 361
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
A+ LFD+ EK VV W AMI+G+ + + I LF++M + N +T+ ++LSAC
Sbjct: 362 DLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSAC 421
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A LG+ GKWVH + + N + AL DMYAKCG I EA ++F + EKN TWN
Sbjct: 422 AQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWN 481
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
++I G +HG G EA+K++ +M G P VT ++VL ACSHAGL+ +G+EIF+NM
Sbjct: 482 TMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNK 541
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
Y++EP ++HY C+VD+L R+ L++A E I+ MP+EP +WG+LL AC D ++
Sbjct: 542 YRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKD---TDI 598
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
A +A ERL +L+P + G YVL+SNIY+ + + A +R+++K+R + K+PGC++IE+N
Sbjct: 599 ARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNG 658
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
H F+ GD H + +IY+ LE + +RE Y A
Sbjct: 659 TPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQA 694
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 210/486 (43%), Gaps = 52/486 (10%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
NS+ + L+ K + Q HAQ I + L KL + L + S
Sbjct: 5 NSSGKLSRNTLFSLINKASTFPHLAQTHAQFI---LNGYRFDLATLTKLTQKLFDFSATR 61
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKAC 141
+A +F + P F FN ++RG++ I LYT + N L PD+FTY + AC
Sbjct: 62 HARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAAC 121
Query: 142 GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
+ + + +H+ + + S + + L+ YC F V A+ +FD M E++ V W M
Sbjct: 122 SNDKHLMLLHAHSIID-GYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTM 180
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
ING VK + + I LFR+M GV V+ T+ +VL A A L ++G + K
Sbjct: 181 INGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGF 240
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
D + L +Y+KCG + A +F+ + ++ +N++I G +G E +VK+F +
Sbjct: 241 GFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRE 300
Query: 322 MQMSGIKPDDVTLIAVLT----------ACSHAGLIEKGKEIF-----------YN---- 356
+ SG + T++ ++ ACS G K I YN
Sbjct: 301 LLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNE 360
Query: 357 --MRR---DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM---PMEPNAVLWGSLLTA 408
+ R D E V + ++ + + A + + M PNAV ++L+A
Sbjct: 361 IDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSA 420
Query: 409 CASADDGANVELAEIAMER----LIKLEPFNDGNYV--LMSNIYAAKAQWDDAGKMRRLM 462
CA +L ++ + LIK E YV + ++YA +A ++ M
Sbjct: 421 CA--------QLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSM 472
Query: 463 KERNIV 468
E+N V
Sbjct: 473 SEKNTV 478
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 176/474 (37%), Positives = 270/474 (56%), Gaps = 6/474 (1%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LL+ C+ + Q+H+QI + T TQL K SL S ++YA + + ++
Sbjct: 668 LSLLKLCSSIKHLYQIHSQIQVSGLQGDTFLVTQLIKF-SSLSPSKDLSYAQSILDHSVH 726
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGV 150
P +N +IRGYA++ + +Y M G+ P+S T+P LLKAC ++ K V
Sbjct: 727 PVPLPWNILIRGYADSNTPKDALFVYRNMRNEGIRPNSLTFPFLLKACAACFATKEGKQV 786
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H V+K + ++ L+ FY + + A +FD+M E+ VV+W A+I V+
Sbjct: 787 HVEVIKY-GLDCDVYVNNNLVNFYGSCKKILDACKVFDEMPERTVVSWNAVITSCVESLK 845
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E I F KMRD G E + T+V +L CA +G LG+W+H V + ++LN +LG A
Sbjct: 846 LGEAIRYFLKMRDFGFEPDGTTMVLMLVICAEMGNLGLGRWIHSQVIERGLVLNYQLGTA 905
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKP 329
L DMYAK G + A VF + EKNV TW+++I GLA HG +E +++F M S I P
Sbjct: 906 LVDMYAKSGAVGYAKLVFDRMKEKNVWTWSAMILGLAQHGFAKEGLELFLDMMRSSLIHP 965
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+ VT + VL ACSHAGL+ G F+ M Y ++P + HYG +VD+L RA LL EAY
Sbjct: 966 NYVTFLGVLCACSHAGLVSDGFRYFHEMGHTYGIKPMMVHYGAMVDILGRAGLLKEAYNF 1025
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I MP +P+ ++W +LL+AC+ D + +A +RL++LEP GN+V+++N+YA
Sbjct: 1026 ITKMPFQPDPIVWRTLLSACSIHDVKDSTGVAYKVRKRLLELEPRRSGNFVMVANMYADA 1085
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
W+ A K+RR+M++ + K G S +E++ +H F G E +Y +L+
Sbjct: 1086 GMWEKAAKVRRVMRDGGLKKKAGESCVELSGSIHRFFSGYDSQDDKEGMYQLLD 1139
>gi|357141422|ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Brachypodium distachyon]
Length = 571
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 163/429 (37%), Positives = 264/429 (61%), Gaps = 19/429 (4%)
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL-DPDSFTYPILLKACGDLRQV---- 147
+P+TF++NT IR A H + LY M+ N L +P+++TYP LL AC L
Sbjct: 54 HPTTFSYNTTIRSLAHGPRPHLAVALYRSMLLNPLSNPNNYTYPPLLAACARLLPAHPPR 113
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLIT-----FYCNFGDVKSAQLLFDQMT--EKNVVTWTA 200
+ V + F + S R I+ FY GD+ +A+ +FD+ ++++ W +
Sbjct: 114 EAAAGTAVHASLFRRGLESRDRFISASMLSFYAAAGDLPAAREVFDRSPPNQRDLALWNS 173
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
+++ ++ Q Y + LFR+M V +E+TL++V+SAC++LGA + G+W H + + C
Sbjct: 174 LLHAYLSQGLYTHVLRLFRQM----VATDEVTLLAVVSACSHLGALDTGRWAHAYHARTC 229
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
LG AL +MY +CG +E A VF +L+K+V TW+ +I GLA++G +A+K+F
Sbjct: 230 RNTTRNLGTALLNMYMRCGDVESAWSVFHEMLDKDVRTWSVMIAGLAVNGLPRDALKLFA 289
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M+ G+ PD +T+ AVL+ACSHAG++++GK + M +Y ++P ++HYGC+VDLL RA
Sbjct: 290 EMKNIGVDPDSITMTAVLSACSHAGMVDEGKMFLHCMPIEYHLQPTIEHYGCVVDLLGRA 349
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
L+EA +I +P + + LWG+LL AC + NV++ ++A ++KL+P + G V
Sbjct: 350 GQLEEALALIETVPFKADVALWGALLVACRAHK---NVDMGQMAAMEILKLDPHHAGACV 406
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYS 500
+SN YAA +WD ++R MKE I K PG S++E++ VV+EF+ GD HP S+ IY+
Sbjct: 407 FLSNAYAAAGKWDLVQEVRSSMKEHRIYKPPGSSIVELDGVVYEFLSGDHSHPQSDRIYA 466
Query: 501 MLEYVAISL 509
ML+ V +L
Sbjct: 467 MLDEVCKTL 475
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 175/423 (41%), Positives = 254/423 (60%), Gaps = 38/423 (8%)
Query: 129 PDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL 185
PD+FT +LKAC L V K +H L K F S + ++ Y G++ A L
Sbjct: 8 PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKL-GFGSNLFLQNMILNLYGLCGEMGDAML 66
Query: 186 LFDQMTE-------------------------------KNVVTWTAMINGHVKQKNYREG 214
LF++M + KNV +WT+MI+G V+ E
Sbjct: 67 LFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEA 126
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
IDLF K+ D V NE+T+VSVL+ACA+LG +LG+ VHE+ K+ N + L DM
Sbjct: 127 IDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDM 186
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y KCG +E A RVF + E+ V +W+++I GLA+HG EEA+ +F +M G+KP+ VT
Sbjct: 187 YVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTF 246
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
I +L ACSH GLI++G+ F +M DY V P ++HYGC+VDL RA LL+EA+E I +MP
Sbjct: 247 IGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMP 306
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
++PN V+WG+LL C N++LAE A++ L +L+P NDG YV++SNIYA +W+D
Sbjct: 307 IKPNGVVWGALLGGCKVH---KNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWED 363
Query: 455 AGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
A ++R+LMK+R + K G S I +N VVHEF+ GD HP +E+I + + + + ++ Y
Sbjct: 364 AARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGY 423
Query: 515 AAR 517
A +
Sbjct: 424 APK 426
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 126/255 (49%), Gaps = 9/255 (3%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I L I A+ F ++ N + ++ ++I G+ + G + I L+ ++ + P+
Sbjct: 82 VIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPN 141
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T +L AC GDL + VH KS F +H LI Y G +++A+ +F
Sbjct: 142 EVTVVSVLAACADLGDLDLGRIVHEYSTKS-GFKRNVHVCNTLIDMYVKCGCLENARRVF 200
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+M E+ VV+W+AMI G E + LF +M GV+ N +T + +L AC+++G +
Sbjct: 201 YEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLID 260
Query: 248 LG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR-VFKIVLEKNVCTWNSIIGG 305
G ++ +I + + D++++ G +EEA + + ++ N W +++GG
Sbjct: 261 EGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGG 320
Query: 306 LAIH---GCGEEAVK 317
+H EEA+K
Sbjct: 321 CKVHKNIDLAEEAIK 335
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 182/485 (37%), Positives = 280/485 (57%), Gaps = 29/485 (5%)
Query: 39 KCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFA 98
K L++ +QVH +IK F T LI+ + A+ +F ++ + A
Sbjct: 148 KINALIEGEQVHCFLIKCGFRGNPFVGT---TLIDMYSAGGTVGDAYKIFCEMFERNVVA 204
Query: 99 FNTVIRGY---AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKGV-H 151
+ ++I GY A+ R L + D + I++ GD+ + + + H
Sbjct: 205 WTSMINGYILSADLVSARRLFDLAPER-------DVVLWNIMVSGYIEGGDMVEARKLFH 257
Query: 152 SLVVKSKDF-NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
+ + F N+V+ Y G+V++ + LF++M E+N+ +W A+I G+
Sbjct: 258 EMPNRDVMFWNTVLKG-------YATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGL 310
Query: 211 YREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ E + F++M +S V N+ TLV+VLSACA LGA +LGKWVH + + + N +G
Sbjct: 311 FFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGN 370
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG IE A+ VF+ + K++ +WN++IGGLA+H G +A+ +F+QM+ +G KP
Sbjct: 371 ALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKP 430
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D +T I +L AC+H GL+E G F +M DY + P ++HYGC+VD+L RA L++A
Sbjct: 431 DGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAF 490
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
+R MP+E + V+W LL AC NVELAE+A++RLI+LEP N NYV++SNIY
Sbjct: 491 VRKMPVEADGVIWAGLLGACRIYK---NVELAELALQRLIELEPKNPANYVMLSNIYGDA 547
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+W+D +++ M++ K PGCS+IE+ND V EF D RHP EEIY +L + L
Sbjct: 548 GRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVL 607
Query: 510 REECY 514
R Y
Sbjct: 608 RSFGY 612
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 196/402 (48%), Gaps = 26/402 (6%)
Query: 27 ATKSHHHL------PLLQKCTHLVQFKQVHAQIIKASFD-NRTISDTQLAKLIESLVNSS 79
A K H L LLQ C Q Q+ AQII F N I+ KL+
Sbjct: 29 APKPPHRLLEERFISLLQSCKTSKQVHQIQAQIIANGFQYNEYIT----PKLVTICATLK 84
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK 139
++ YA +F+QI +P+ +N++ RGYA++ + L+ QM G + P+ FT+P++LK
Sbjct: 85 RMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLK 144
Query: 140 ACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVV 196
+CG + + + VH ++K F T LI Y G V A +F +M E+NVV
Sbjct: 145 SCGKINALIEGEQVHCFLIKC-GFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVV 203
Query: 197 TWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV 256
WT+MING++ + LF + V + + + + + A +L HE
Sbjct: 204 AWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKL---FHEMP 260
Query: 257 NKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAV 316
N++ + N L YA G +E +F+ + E+N+ +WN++IGG A +G E +
Sbjct: 261 NRDVMFWNTVLKG-----YATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVL 315
Query: 317 KMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
F +M S + P+D TL+ VL+AC+ G ++ GK + + ++ NV L+D
Sbjct: 316 GSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWV-HVYAESSGLKGNVYVGNALMD 374
Query: 376 LLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ + +++ A V R M + + + W +L+ A GA+
Sbjct: 375 MYAKCGIIENAISVFRGMDTK-DLISWNTLIGGLAMHSRGAD 415
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 198/572 (34%), Positives = 294/572 (51%), Gaps = 100/572 (17%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L L C L KQVHAQII + N + LA L + +AYA +F+ + N
Sbjct: 100 LSLFNPCKTLRHLKQVHAQII--THHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQN 157
Query: 94 PSTFAFNTVIRGYA-----------------------------------EAGLGHRGIQL 118
P +N++IR + E+ + G+ +
Sbjct: 158 PPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLV 217
Query: 119 YTQMIGNGLDPDSFTYPILL----------------KAC-------------GDLRQVKG 149
+T ++ +G + DS+ L+ C G ++ V+
Sbjct: 218 HTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEM 277
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
H+ +V + + S +I Y G + A+ LFD+M E+N+V+W +M+ G VK
Sbjct: 278 GHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCG 337
Query: 210 NYR-------------------------------EGIDLFRKMRDSGVEVNELTLVSVLS 238
N E + LF +MR GV+ E T+VS+LS
Sbjct: 338 NVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLS 397
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
ACA+LGA + G +H ++N N I +N +G AL DMYAKCG I A +VF + K+V
Sbjct: 398 ACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLA 457
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
WN+II G+AIHG +EA ++F +M+ +G++P+D+T +A+L+ACSHAG++++G+++ M
Sbjct: 458 WNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMS 517
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
Y +EP V+HYGC++DLL RA L+EA E+I MPMEPN G+LL C N
Sbjct: 518 SSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIH---GNF 574
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
EL E+ +RLI L+P + G Y+L+SNIYAA +WDDA K+R LMK I K PG SVIE+
Sbjct: 575 ELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIEL 634
Query: 479 NDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+VH F+ GD HP S +IY L + L+
Sbjct: 635 KGMVHRFVAGDWSHPESNKIYEKLNEIHTRLK 666
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 233/350 (66%), Gaps = 3/350 (0%)
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
+I Y GD+ A+ LFD M E+NVV+WT +I G+ + + E +++FR+M+ G+E +
Sbjct: 151 MIAGYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPD 210
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
+ L+SVLSAC +LGA +LG+WVH FV + + L ++ DMY KCG IE+A+ VF+
Sbjct: 211 GVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFE 270
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ EK+V TW ++I G A+HG G +AV+MF +M+ + P+DVT +A+L+ACSH GL +
Sbjct: 271 GMEEKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDL 330
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
G+ F M Y+++P V+HYGC+VDLL RA L EA +++++MP++ NA +WG+LL A
Sbjct: 331 GRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAAS 390
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
+ D +L E A+ LI+LEP N GNY+L+SNI+A + +WDD K+R+ MKER +
Sbjct: 391 RTHGDA---DLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRN 447
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARMP 519
PG S IE++ +VHEF DG HP +I +L + +++ +A+ P
Sbjct: 448 VPGASSIEVDGMVHEFTSRDGSHPFLHKICEVLCEINTNMKSVGFASVFP 497
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 154/316 (48%), Gaps = 21/316 (6%)
Query: 22 KNSNTATKSHHHLPLLQ---KCTHLVQFKQVHAQIIKASFDNRTISDT-QLAKLIESLVN 77
+ + A+ +H L+Q C H+ + V F + D +I V
Sbjct: 106 RTGHVASDTHVSASLVQLYCTCRHVADARSV--------FHEMAVRDVVAWNVMIAGYVK 157
Query: 78 SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPIL 137
+ +A+A +F+ + + ++ TVI GYA+ ++++ +M G++PD +
Sbjct: 158 AGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLSV 217
Query: 138 LKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
L ACGDL V + VH VV+ + I + +I Y G ++ A +F+ M EK+
Sbjct: 218 LSACGDLGAVDLGEWVHRFVVR-RGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKS 276
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
VVTWT +I G + +++FR+M + N++T +++LSAC+++G ++LG+W
Sbjct: 277 VVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFN 336
Query: 255 -FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHG-- 310
V++ I + + D+ + G ++EA + K + L+ N W +++ HG
Sbjct: 337 IMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDA 396
Query: 311 -CGEEAVKMFWQMQMS 325
GEEA+ +++ S
Sbjct: 397 DLGEEALVHLIELEPS 412
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 289/532 (54%), Gaps = 48/532 (9%)
Query: 15 TNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIE 73
+ ++ H A + LL C + ++HA ++AS D D +A +L
Sbjct: 9 SPASTRHPAGGGALTADRAAALLAGCASASRAAEIHAAAVRASVDQ----DKAVAFRLQR 64
Query: 74 SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI--GNGLDPDS 131
+ S ++ A + + +P+ + + I ++ GL + L ++M+ +GL P +
Sbjct: 65 AYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTA 124
Query: 132 FTYPILLKACGDLRQVKGVHSLVVK--------------------------SKDFNSV-- 163
T L ACG L + +H VK F+ +
Sbjct: 125 HTLSASLPACGCLAVGRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRP 184
Query: 164 ---IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
+ S+T +++ Y G + A+ LFD + K++V W AM++G+ + E + LFR+
Sbjct: 185 DPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQ 244
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV----NKNCIILNDKLGAALTDMYA 276
M SGVE +E+++V LSA A LG +E G+W+H FV + + LN ++G AL DMY
Sbjct: 245 MLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYY 304
Query: 277 KCGYIEEALRVFKIVL---EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVT 333
KCG +EEA+ VF+ + +++V WN++I G A+HG EA++ F Q++ G+ P D+T
Sbjct: 305 KCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDIT 364
Query: 334 LIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
I VL ACSH+GL+++G+ +F M +Y + P V+HYGC+VDLL RA ++EA++++++M
Sbjct: 365 FIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSM 424
Query: 394 PMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWD 453
+P+A +W SLL AC N+ L + + L+ N G YVL+SN+YAA +W
Sbjct: 425 KAKPDAAMWASLLGACRLHK---NLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWR 481
Query: 454 DAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
+ G++R +M+ + K PGCS +E+ V EF+ GD HP S EIY+ LE V
Sbjct: 482 EVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEV 533
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 193/511 (37%), Positives = 291/511 (56%), Gaps = 52/511 (10%)
Query: 25 NTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYA 84
+T +S H LL CT+L +Q ++ D D LA+ I + + +YA
Sbjct: 25 STLPRSQHAEQLLCHCTNLSHLQQTQGFMLTRGLDQ---DDILLARFIYTSASLGLSSYA 81
Query: 85 HLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL 144
+ VF PS F +N VI + + R I L+ + G+ PDS+++P +LKA L
Sbjct: 82 YSVFISNHRPSIFFYNNVIWALSSSN-PTRAISLFNAIRLLGMPPDSYSFPFVLKAVVCL 140
Query: 145 RQV---KGVH--SLVVKSKDFNSVIHSLTRLI----------------TF---------- 173
V K +H ++V SV+ SL ++ TF
Sbjct: 141 SAVHVGKQIHCQAIVSGLDSHPSVVTSLVQMYSSCAHLSSARKLFDGATFKHAPLWNAML 200
Query: 174 --YCNFGDVKSAQLLFDQMTEKN--VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
Y G++ +A+ LF+ M EK+ VV+WT +I+G+ + + E I LFR M V+ +
Sbjct: 201 AGYAKVGNMSNARNLFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQNVQPD 260
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA------ALTDMYAKCGYIEE 283
E+ +++VLSACA+LGA +LG+W+H ++ K+ N+KL +L DMYAK G I +
Sbjct: 261 EIAILAVLSACADLGALQLGEWIHNYIEKH----NNKLRKTVPLCNSLIDMYAKSGDISK 316
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A ++F+ + K + TW ++I GLA+HG G+EA+ +F M+ + +KP++VTLIAVL+ACSH
Sbjct: 317 ARQLFQNMKHKTIITWTTVISGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSH 376
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
GL+E G+ IF +MR Y +EP ++HYGC++DLL RA L EA E++R MP E NA +WG
Sbjct: 377 VGLVELGRNIFTSMRSKYGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWG 436
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
SLL+A D A LA A+ L LEP N GNY L+SN YAA W +A +R++M+
Sbjct: 437 SLLSASNRYGDAA---LAAEALRHLSVLEPHNCGNYSLLSNTYAALGWWKEAAMVRKVMR 493
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+ K PG S +E+N+ V+EF+ GD + C
Sbjct: 494 DTCAEKVPGVSFVELNNRVYEFIAGDKLNIC 524
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 176/500 (35%), Positives = 276/500 (55%), Gaps = 13/500 (2%)
Query: 18 ANSHKNSNTATKSHHHLPLLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIES 74
A H N S H P L K ++ Q HA I+K D+ L I
Sbjct: 91 AYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSL---ISG 147
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
+S +A +F+ + + +I G+ G + + +M G+ + T
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTV 207
Query: 135 PILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
+LKA G D+R + VH L +++ + + L+ Y AQ +FD+M
Sbjct: 208 VSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+NVVTWTA+I G+V+ + + +G+ +F +M S V NE TL SVLSACA++GA G+
Sbjct: 268 SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRR 327
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
VH ++ KN I +N G L D+Y KCG +EEA+ VF+ + EKNV TW ++I G A HG
Sbjct: 328 VHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGY 387
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
+A +F+ M S + P++VT +AVL+AC+H GL+E+G+ +F +M+ + +E HY
Sbjct: 388 ARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMELKADHYA 447
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VDL R LL+EA +I MPMEP V+WG+L +C D EL + A R+IKL
Sbjct: 448 CMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKD---YELGKYAASRVIKL 504
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
+P + G Y L++N+Y+ WD+ ++R+ MK++ +VK+PG S IE+ + EF+ D +
Sbjct: 505 QPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDK 564
Query: 492 HPC-SEEIYSMLEYVAISLR 510
P S+++Y L+ V + +R
Sbjct: 565 KPLESDDLYKTLDTVGVQMR 584
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 267/434 (61%), Gaps = 10/434 (2%)
Query: 78 SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAG--LGHRGIQLYTQMI-GNGLDPDSFTY 134
S +AYA LVF++I NP T A+N++IRG++++ L + I Y M+ + PD++T+
Sbjct: 445 SGSLAYAQLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTF 504
Query: 135 PILLKACGDLRQ---VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
LLKAC + ++ + VH +++ ++ + T LI Y G +++A +F++M
Sbjct: 505 SFLLKACEEAKEEGKCREVHGFIIRF-GYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMP 563
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+++V+W +MI+ + + + E + ++ +MR S V + TLVS+LS+CA++GA +G
Sbjct: 564 ARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQ 623
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+H F + ++ N +G AL DMYAKCG + AL +F + +++V TWNS+I G +HG
Sbjct: 624 MHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGR 683
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
G+EA+ F M M+G++P+ +T + +L CSH GL+++G + F+ M ++ ++P +KHYG
Sbjct: 684 GDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYG 743
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VDL RA L EA EVIR+ P + + VLW +LL +C NVE+ E+AM L++L
Sbjct: 744 CMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIH---RNVEIGEMAMRNLVQL 800
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
G+ VL+S IYA +MR+L++ R I PG S IE+ D VH F+V D
Sbjct: 801 GSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKS 860
Query: 492 HPCSEEIYSMLEYV 505
HP S EIY LE V
Sbjct: 861 HPDSREIYRKLEEV 874
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 151/332 (45%), Gaps = 21/332 (6%)
Query: 20 SHKNSNTATKSHHHLPLLQKCTHLVQ---FKQVHAQIIKASFDNRTISDTQLAKLIESLV 76
SH +T T S LL+ C + ++VH II+ +D + T L I S
Sbjct: 495 SHARPDTYTFSF----LLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNL---IRSYA 547
Query: 77 NSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPI 136
+ I AH VF ++ ++N++I Y + GL +++Y QM + + D FT
Sbjct: 548 GNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVS 607
Query: 137 LLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
LL +C G L +H + + ++ LI Y G + SA +F+ M ++
Sbjct: 608 LLSSCAHVGALHMGVQMHRFAGERRLVENIFVG-NALIDMYAKCGSLASALSIFNSMPKR 666
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG-KWV 252
+V TW +MI G+ E I F M +GV N +T + +L C++ G + G ++
Sbjct: 667 DVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYF 726
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK-NVCTWNSIIGGLAIH-- 309
H ++ + K + D++ + G ++EAL V + + + W +++G IH
Sbjct: 727 HMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHRN 786
Query: 310 -GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
GE A++ +Q+ + D L++ + A
Sbjct: 787 VEIGEMAMRNL--VQLGSLGAGDCVLLSGIYA 816
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 120/294 (40%), Gaps = 45/294 (15%)
Query: 24 SNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIA 82
SN + LL C H+ + Q+ + + + R + + + LI+ +A
Sbjct: 596 SNVGFDGFTLVSLLSSCAHVGAL-HMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLA 654
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG 142
A +FN + F +N++I GY G G I + M+ G+ P+S T+ LL C
Sbjct: 655 SALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCS 714
Query: 143 DLRQVK-GVHSLVVKSKDFN--SVIHSLTRLITFYCNFGDVKSA-QLLFDQMTEKNVVTW 198
VK GV + S +FN I ++ + G +K A +++ ++ + V W
Sbjct: 715 HQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLW 774
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
++ +N VE+ E+ + +++ +LGA
Sbjct: 775 RTLLGSCKIHRN---------------VEIGEMAMRNLVQ-LGSLGAG------------ 806
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT---WNSIIGGLAIH 309
+C++ L+ +YA+ ++ R+ K++ + + T W+ I G +H
Sbjct: 807 DCVL--------LSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVH 852
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 280/503 (55%), Gaps = 42/503 (8%)
Query: 47 KQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
+ +H +K++ SD +A LI + + A VF I ++N++I G
Sbjct: 151 QSLHGMAVKSAVG----SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 206
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLV--VKSKDFNSV 163
+ + G + ++L+ +M + T +L AC +R ++ + ++ N
Sbjct: 207 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ ++ Y G ++ A+ LFD M EK+ VTWT M++G+ ++Y ++ M
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 224 SGV--------------------------------EVNELTLVSVLSACANLGASELGKW 251
+ ++N++TLVS LSACA +GA ELG+W
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+H ++ K+ I +N + +AL MY+KCG +E++ VF V +++V W+++IGGLA+HGC
Sbjct: 387 IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGC 446
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
G EAV MF++MQ + +KP+ VT V ACSH GL+++ + +F+ M +Y + P KHY
Sbjct: 447 GNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYA 506
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VD+L R+ L++A + I MP+ P+ +WG+LL AC AN+ LAE+A RL++L
Sbjct: 507 CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH---ANLNLAEMACTRLLEL 563
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
EP NDG +VL+SNIYA +W++ ++R+ M+ + K PGCS IEI+ ++HEF+ GD
Sbjct: 564 EPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNA 623
Query: 492 HPCSEEIYSMLEYVAISLREECY 514
HP SE++Y L V L+ Y
Sbjct: 624 HPMSEKVYGKLHEVMEKLKSNGY 646
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 241/475 (50%), Gaps = 48/475 (10%)
Query: 11 LTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK 70
L N +N ++ + +S H + L+++C L Q KQ H +I+ + S ++L
Sbjct: 12 LPRHPNFSNPNQPTTNNERSRH-ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFA 70
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDP 129
+ +L + + + YA VF++I P++FA+NT+IR YA I + M+ P
Sbjct: 71 MA-ALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYP 129
Query: 130 DSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
+ +T+P L+KA ++ + + +H + VKS S + LI Y + GD+ SA +
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA-VGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
F + EK+VV+W +MING V++ + + ++LF+KM V+ + +T+V VLSACA +
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNL 248
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
E G+ V ++ +N + +N L A+ DMY KCG IE+A R+F + EK+ TW +++ G
Sbjct: 249 EFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGY 308
Query: 307 AI-------------------------------HGCGEEAVKMFWQMQMS-GIKPDDVTL 334
AI +G EA+ +F ++Q+ +K + +TL
Sbjct: 309 AISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITL 368
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
++ L+AC+ G +E G+ I +++ + + N L+ + + L+++ EV ++
Sbjct: 369 VSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN-DGNYVLMSNIYAA 448
+ + +W +++ A G A++ K++ N N V +N++ A
Sbjct: 428 -KRDVFVWSAMIGGLAMHGCGNE------AVDMFYKMQEANVKPNGVTFTNVFCA 475
>gi|125528144|gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indica Group]
Length = 565
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/432 (39%), Positives = 272/432 (62%), Gaps = 13/432 (3%)
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEA-GLGHRG--IQLYTQMIGNGLD-PDSFTYPILL 138
YA +F+QI P+ F +N++IR + A G+ + +Y +M+ G P+SFT L
Sbjct: 76 YARNLFDQIPEPTAFCYNSLIRALSSAAGVAPAADTVLVYRRMLRAGSPLPNSFTLAFAL 135
Query: 139 KACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKN 194
KAC L + + +HS + + + T L+ Y +V A+ +FD M +KN
Sbjct: 136 KACSVVPALGEGRQLHSQAFR-RGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKN 194
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
+ W+AMI G+ + E + LFR+M+ + V +E+T+VSV+SACA GA +LG+WVH
Sbjct: 195 LAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHA 254
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
F+++ I ++ +L AL DMYAKCG IE A VF + E++ W+++I GLAIHG E
Sbjct: 255 FIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEV 314
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+K+F +M ++P++VT I VL+AC+H+GL+ +G+ +++ ++ ++P++++YGC+V
Sbjct: 315 ALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRR-YWSTMQELGIKPSMENYGCMV 373
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
DL CR+ LLDEAY + M + PN+V+W +LL A +++ ++ + A ++L++LEP
Sbjct: 374 DLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSN---RFDIVQSASKKLLELEPC 430
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
N NYVL+SN+YA+ +QWD MR+ MKE N+ GCS IEIN +H+F+V D HP
Sbjct: 431 NPENYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCSSIEINGYLHKFVVSDDSHPE 490
Query: 495 SEEIYSMLEYVA 506
+EI +L +A
Sbjct: 491 IKEIRLLLREIA 502
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/477 (37%), Positives = 274/477 (57%), Gaps = 13/477 (2%)
Query: 39 KCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFA 98
K L++ +QVH +IK F T LI+ + A+ +F ++ + A
Sbjct: 211 KINALIEGEQVHCFLIKCGFRGNPFVGT---TLIDMYSAGGTVGDAYKIFCEMFERNVVA 267
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSK 158
+ ++I GY + +L+ L P+ + G + V + + +
Sbjct: 268 WTSMINGYILSADLVSARRLFD------LAPERDVVLWNIMVSGYIEGGDMVEARKLFXE 321
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
N + ++ Y G+V++ + LF++M E+N+ +W A+I G+ + E + F
Sbjct: 322 MPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSF 381
Query: 219 RKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
++M +S V N+ TLV+VLSACA LGA +LGKWVH + + + N +G AL DMYAK
Sbjct: 382 KRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAK 441
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG IE A+ VF+ + K++ +WN++IGGLA+H G +A+ +F+QM+ +G KPD +T I +
Sbjct: 442 CGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGI 501
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
L AC+H GL+E G F +M DY + P ++HYGC+VD+L RA L++A +R MP+E
Sbjct: 502 LCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEA 561
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
+ V+W LL AC NVELAE+A++RLI+LEP N NYV++SNIY +W+D +
Sbjct: 562 DGVIWAGLLGACRIYK---NVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVAR 618
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
++ M++ K PGCS+IE+ND V EF D RHP EEIY +L + LR Y
Sbjct: 619 LKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGY 675
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 189/385 (49%), Gaps = 18/385 (4%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
++ C Q Q+ AQII F +L + +L ++ YA +F+QI +P+
Sbjct: 108 MRSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATL---KRMTYARQLFDQIPDPNI 164
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSL 153
+N++ RGYA++ + L+ QM G + P+ FT+P++LK+CG + + + VH
Sbjct: 165 ALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCF 224
Query: 154 VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYRE 213
++K F T LI Y G V A +F +M E+NVV WT+MING++ +
Sbjct: 225 LIKC-GFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVS 283
Query: 214 GIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTD 273
LF + V + + + + + A +L E N++ + N L
Sbjct: 284 ARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKL---FXEMPNRDVMFWNTVLKG---- 336
Query: 274 MYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIKPDDV 332
YA G +E +F+ + E+N+ +WN++IGG A +G E + F +M S + P+D
Sbjct: 337 -YATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDA 395
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
TL+ VL+AC+ G ++ GK + + ++ NV L+D+ + +++ A V R
Sbjct: 396 TLVTVLSACARLGALDLGKWV-HVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRG 454
Query: 393 MPMEPNAVLWGSLLTACASADDGAN 417
M + + + W +L+ A GA+
Sbjct: 455 MDTK-DLISWNTLIGGLAMHSRGAD 478
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/435 (38%), Positives = 271/435 (62%), Gaps = 9/435 (2%)
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
+ YA +F ++ ++N++I G +AG R +L+ +M + D+ ++ +L
Sbjct: 174 VNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMA----ERDAVSWNTILDG 229
Query: 141 CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
++ +L K + N V S + +++ YC GD++ A++LFD+M KN+VTWT
Sbjct: 230 YVKAGEMSQAFNLFEKMPERNVV--SWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTI 287
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
+I+G ++ +E L+ +M +G++ ++ TL+S+L+ACA G LGK VH + K
Sbjct: 288 IISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIR 347
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
I + + AL DMYAKCG +++AL +F + +++ +WN ++ GLA+HG GE+A+++F
Sbjct: 348 IKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFS 407
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+MQ G KPD VTLIA+L AC+HAG +++G F +M RD+ + P+++HYGC++DLL R
Sbjct: 408 KMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRG 467
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
L+EA+ ++++MPMEPN V+WG+LL AC + V LAE ++RLI LE + GNY
Sbjct: 468 GRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHN---AVPLAEKVLDRLITLEQSDPGNYS 524
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYS 500
++SNI+AA W+ MR MK + K G S IE++D VHEF V D HP +++IY
Sbjct: 525 MLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHPETDKIYQ 584
Query: 501 MLEYVAISLREECYA 515
+L + L++ YA
Sbjct: 585 ILVKLGQDLKQVAYA 599
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 43 LVQFKQVHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
LV K+VHA I K + +S+ L++ ++ A +FN++ ++N
Sbjct: 333 LVLGKKVHASIKKIRIKCSVNVSNA----LVDMYAKCGRVDKALSIFNEMSMRDLVSWNC 388
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
+++G A G G + IQL+++M G PD T +L AC
Sbjct: 389 MLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCAC 428
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 272/456 (59%), Gaps = 9/456 (1%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD + D + LI S + A +F+ ++ ++ ++N++I YA G +
Sbjct: 143 FDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEAL 202
Query: 117 QLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
+L+ +M+ G P++ T + C GDL K SL+ + N ++H T L+
Sbjct: 203 RLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQNMIVH--TALMEM 260
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y + A+ FD+M +++VV W+ MI G+ + E ++LF +M+ + + NE+TL
Sbjct: 261 YVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTL 320
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
V VLSACA LG+ ELG + V + L LG+AL DMY KCG++ A VF +
Sbjct: 321 VGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEH 380
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K V TWNS++ GLA++G ++A+ ++ +M ++P+++T +A+LTAC+HAGL+++G
Sbjct: 381 KVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSF 440
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F M+ + V P V+H C+VDLLC++ L EAY+ I +M +EPNAV+W +LL+AC +
Sbjct: 441 FKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAH- 499
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
A+VELA++A +L+ LEP N YVL+SNIYA W D ++R LM+ +N+ K
Sbjct: 500 --ADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAY 557
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
S IE++ VH+F+V D HP S EI+++++ + + L
Sbjct: 558 SWIELDGEVHKFLVQDTYHPKSAEIFNVVDGMGLHL 593
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 166/371 (44%), Gaps = 40/371 (10%)
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
L ++S A +F+ + P+ T+I + + ++ + G D
Sbjct: 29 LSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCV 88
Query: 135 PILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYC---------------- 175
P+++K+C L RQ K VH + + I T L+ FY
Sbjct: 89 PLVVKSCAILAASRQGKQVHCHAI-VRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMP 147
Query: 176 ---------------NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
GDV A+ LFD M + +W +MI + Y+E + LFR+
Sbjct: 148 VKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRR 207
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M G N +T+ ++ S CA G E GKW + + + N + AL +MY KC
Sbjct: 208 MLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQ-DLQNMIVHTALMEMYVKCQA 266
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
I+EA R F + +++V W+++I G A +G E++++F +M+ + KP++VTL+ VL+A
Sbjct: 267 IDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSA 326
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG-CLVDLLCRARLLDEAYEVIRNMPMEPNA 399
C+ G E G +I ++ + + P + G L+D+ + + A V M +
Sbjct: 327 CAQLGSDELGGQIGSHV--ESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHK-VV 383
Query: 400 VLWGSLLTACA 410
+ W S++ A
Sbjct: 384 ITWNSMMRGLA 394
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 187/479 (39%), Positives = 271/479 (56%), Gaps = 41/479 (8%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
L++ L+ + YA +F+ N TF +N +I+ Y H I LY + +GL P
Sbjct: 15 LLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPS 74
Query: 131 SFTYPILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG--------- 178
T+ + A R ++ +HS +S F S T LIT Y G
Sbjct: 75 HHTFNFIFAASASFSSARPLRLLHSQFFRS-GFESDSFCCTTLITAYAKLGALCCARRVF 133
Query: 179 ----------------------DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID 216
D+K+A LFD M KNV +WT +I+G + NY E +
Sbjct: 134 DEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALK 193
Query: 217 LFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
+F M +D V+ N +T+VSVL ACANLG E+G+ + + +N N + A +MY
Sbjct: 194 MFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMY 253
Query: 276 AKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
+KCG I+ A R+F+ + ++N+C+WNS+IG LA HG +EA+ +F QM G KPD VT
Sbjct: 254 SKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTF 313
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+ +L AC H G++ KG+E+F +M +K+ P ++HYGC++DLL R L EAY++I+ MP
Sbjct: 314 VGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMP 373
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
M+P+AV+WG+LL AC+ NVE+AEIA E L KLEP N GN V+MSNIYAA +WD
Sbjct: 374 MKPDAVVWGTLLGACSFH---GNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDG 430
Query: 455 AGKMRRLMKERNIVKNPGCS-VIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
+MR+LMK+ + K G S +E+ VH+F V D HP S EIY +LE + ++ E
Sbjct: 431 VLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLE 489
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/504 (36%), Positives = 286/504 (56%), Gaps = 43/504 (8%)
Query: 49 VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE 108
VHAQ IK ++ + V I A VF+ I + + ++N++I GY++
Sbjct: 159 VHAQAIKLGMGPHACVQN---AILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSK 215
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVH-SLVVKSKDFNSVI 164
G I L+ +M+ G++ D FT LL A +L + VH +V+ + +S++
Sbjct: 216 MGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIV 275
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH------------------- 205
+ LI Y G ++ A+ +FDQM +K+VV+WT+M+N +
Sbjct: 276 TN--ALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVK 333
Query: 206 ------------VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
V++ Y E ++LF +M SGV ++ TLVS+LS C+N G LGK H
Sbjct: 334 NVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAH 393
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
++ N I ++ L +L DMYAKCG ++ A+ +F + EKNV +WN IIG LA+HG GE
Sbjct: 394 CYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGE 453
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
EA++MF MQ SG+ PD++T +L+ACSH+GL++ G+ F M +++ P V+HY C+
Sbjct: 454 EAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACM 513
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
VDLL R L EA +I+ MP++P+ V+WG+LL AC N+E+A+ M++L++L
Sbjct: 514 VDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIY---GNLEIAKQIMKQLLELGR 570
Query: 434 FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHP 493
FN G YVL+SN+Y+ +WDD K+R++M + I K S IEI+ ++FMV D RH
Sbjct: 571 FNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIEIDGCCYQFMVDDKRHC 630
Query: 494 CSEEIYSMLEYVAISLREECYAAR 517
S IYS+L+ + L+ Y +
Sbjct: 631 ASTGIYSILDQLMDHLKSVGYPCK 654
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/426 (31%), Positives = 220/426 (51%), Gaps = 46/426 (10%)
Query: 21 HKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ 80
H+ + ++ HHL L +C+ + + K VHAQII + ++ L KL+ V
Sbjct: 32 HQLKSPTHQTLHHL--LDQCSSMKRLKLVHAQIILHGLAAQVVT---LGKLLSLCVQEGD 86
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
+ YAHL+F+QI P+ F +N +IRGY+ + + + L+ QM+ G P+ FT+P +LKA
Sbjct: 87 LRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKA 146
Query: 141 CGD---LRQVKGVHSLVVKSKDFNSVIHSLTR--LITFYCNFGDVKSAQLLFDQMTEKNV 195
C + VH+ +K H+ + ++T Y + SA+ +FD ++++ +
Sbjct: 147 CAAKPFYWEAVIVHAQAIK---LGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTI 203
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V+W +MI G+ K E I LF++M GVE + TLVS+LSA + +LG++VH +
Sbjct: 204 VSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLY 263
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE---------------------- 293
+ + ++ + AL DMYAKCG+++ A VF +L+
Sbjct: 264 IVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENA 323
Query: 294 ---------KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
KNV +WNSII L G EAV++F +M +SG+ PDD TL+++L+ CS+
Sbjct: 324 VQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNT 383
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
G + GK+ + D + +V L+D+ + L A ++ MP E N V W
Sbjct: 384 GDLALGKQA-HCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMP-EKNVVSWNV 441
Query: 405 LLTACA 410
++ A A
Sbjct: 442 IIGALA 447
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 9/163 (5%)
Query: 47 KQVHAQIIKASFDNR-TISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
KQ H I DN T+S T LI+ + A +F + + ++N +I
Sbjct: 390 KQAHCYIC----DNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGA 445
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNS 162
A G G I+++ M +GL PD T+ LL AC G + + +++ + +
Sbjct: 446 LALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISP 505
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEK-NVVTWTAMING 204
+ ++ G + A L +M K +VV W A++
Sbjct: 506 GVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGA 548
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/488 (36%), Positives = 281/488 (57%), Gaps = 12/488 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQII 92
LP L L Q K+VH II+ N D L + L++ + A +++
Sbjct: 350 LPALTDLNGLKQGKEVHGYIIR----NCVHMDAFLVSALVDIYFKCRDVRTARNLYDAAR 405
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
+TVI GY G+ + +Q++ ++ + P++ T +L AC + + +
Sbjct: 406 AIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQE 465
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H V+++ + + + L+ Y G + + +F +M+ K+ VTW +MI+ +
Sbjct: 466 IHGYVLRNA-YEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNG 524
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+E +DLFR+M G++ N +T+ S LSACA+L A GK +H + K I + +
Sbjct: 525 EPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAES 584
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG +E ALRVF+ + +KN +WNSII HG +E+V +MQ G KP
Sbjct: 585 ALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKP 644
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D VT +A+++AC+HAGL+E+G ++F M ++Y + P ++H+ C+VDL R+ LD+A +
Sbjct: 645 DHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQF 704
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I +MP +P+A +WG+LL AC NVELA+IA + L KL+P N G YVLMSNI A
Sbjct: 705 IADMPFKPDAGIWGALLHACRVHR---NVELADIASQELFKLDPGNSGYYVLMSNINAVA 761
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+WD K+RRLMK+ I+K PG S +++N+ H F+ D HP SE+IY+ L+ + L
Sbjct: 762 GRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQEL 821
Query: 510 REECYAAR 517
REE Y R
Sbjct: 822 REEGYVPR 829
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 199/426 (46%), Gaps = 53/426 (12%)
Query: 34 LPLLQKCT---HLVQFKQVHAQ-IIKASFDNRTISDTQLA---KLIESLVNSSQIAYAHL 86
L LL+ C HL Q+HA+ ++ + N LA +L+ V + + A
Sbjct: 36 LALLRGCVSAPHLPLGLQIHARAVVSGALSNHN----HLALHTRLLGMYVLARRFRDAVA 91
Query: 87 VFNQIINP---STFAFNTVIRGYAEAGLGHRGIQLYTQMIGN--GLDPDSFTYPILLKAC 141
VF+ + S+ +N +IRG+ AG + Y +M + PD+ T P ++K+C
Sbjct: 92 VFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSC 151
Query: 142 GDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
L V + VH ++ S ++ + LI Y + G ++ A+ FD M ++ V W
Sbjct: 152 AALGAVSLGRLVHR-TARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLW 210
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
M++G++K + + LFR MR SG E N TL LS CA G +H K
Sbjct: 211 NVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVK 270
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+ + L MYAKC +++A R+F+++ ++ TWN +I G +G +EA+ +
Sbjct: 271 CGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGL 330
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI---------------------FYNM 357
F M SG +PD VTL+++L A + +++GKE+ Y
Sbjct: 331 FCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFK 390
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLL---------DEAYEVIRNM---PMEPNAVLWGSL 405
RD + N+ +D++ + ++ ++A ++ R + ++PNAV S+
Sbjct: 391 CRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASV 450
Query: 406 LTACAS 411
L ACAS
Sbjct: 451 LPACAS 456
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 163/314 (51%), Gaps = 8/314 (2%)
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVV 155
+N ++ GY +AG ++L+ M +G +P+ T L C DL +HSL V
Sbjct: 210 WNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAV 269
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
K V + T L++ Y + A LF+ + ++VTW MI+G V+ E +
Sbjct: 270 KCGLEQEVAVANT-LLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEAL 328
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
LF M SG + +TLVS+L A +L + GK VH ++ +NC+ ++ L +AL D+Y
Sbjct: 329 GLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIY 388
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
KC + A ++ +V +++I G ++G E+A++MF + IKP+ VT+
Sbjct: 389 FKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVA 448
Query: 336 AVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+VL AC+ + G+EI Y +R Y+ + V+ L+D+ + LD ++ + M
Sbjct: 449 SVLPACASISALPLGQEIHGYVLRNAYEGKCYVE--SALMDMYAKCGRLDLSHYIFSKMS 506
Query: 395 MEPNAVLWGSLLTA 408
++ + V W S++++
Sbjct: 507 LK-DEVTWNSMISS 519
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/474 (37%), Positives = 269/474 (56%), Gaps = 47/474 (9%)
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDPDSFT 133
L S +A A +F+ ++NT+I GY G+ ++++ +M+G+G + PD T
Sbjct: 165 LAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVT 224
Query: 134 YPILLKA--------------------------------------CGDLRQVKGVHSLVV 155
++ CGDL + K V +
Sbjct: 225 MIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGID 284
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
K I S T +I Y FG + A+ +FD+M E++V W A++ G+V+ K +E +
Sbjct: 285 KK-----TIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEAL 339
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
LF M+++ VE +++T+V++LSAC+ LGA E+G WVH ++++ + L+ LG L DMY
Sbjct: 340 RLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMY 399
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
+KCG IE+A+RVFK + EKN TW ++I GLA HG + A+K F +M G++PD++T I
Sbjct: 400 SKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFI 459
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
VL+AC HAGL+++G+E F M Y +E +KHY C+VDLL RA LDEA ++ MPM
Sbjct: 460 GVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPM 519
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
EP+AV+WG+L AC N+ L E A +L++L+P + G YVL++N+YA A
Sbjct: 520 EPDAVVWGALFFACRMH---GNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKA 576
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
K+R +M+ + K PGCS IE+N VVHEF+V D H IY L + + +
Sbjct: 577 DKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHTDIAAIYDCLHEITLQI 630
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 211/430 (49%), Gaps = 52/430 (12%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYA---------HLVFNQIINPSTFA 98
Q+HA ++ A + ++L+E+L +S ++ L S
Sbjct: 26 QLHAHLLTAGLMSSRSPFPLASRLVEALAHSDDPRHSPRPLLHALALLASLPTPPDSASP 85
Query: 99 FNTVIRGYA---EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLV- 154
+N +R + + GL R + LY ++ + PD T+P LLKAC L++ ++++
Sbjct: 86 YNAALRALSLCTDRGLVTRCLPLYCSLLRSA-RPDHLTFPFLLKACARLQERNYGNAVLG 144
Query: 155 -VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYRE 213
V S F++ + + + F + A+ LFD +++V+W +I G+V++ RE
Sbjct: 145 NVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPRE 204
Query: 214 GIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
+++F +M D V +E+T++ V+S A L ELG+ +H +V + + +L +
Sbjct: 205 ALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVM 264
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC--------------------- 311
DMY KCG +E A VF+ + +K + +W ++I G A G
Sbjct: 265 DMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNA 324
Query: 312 ----------GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
G+EA+++F MQ + ++PDD+T++ +L+ACS G +E G + + + R
Sbjct: 325 LMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDR-R 383
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
+V +V LVD+ + +++A V + +P E NA+ W ++++ A + + ++A
Sbjct: 384 RVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIP-EKNALTWTAMISGLA---NHGHADVA 439
Query: 422 EIAMERLIKL 431
+R+I+L
Sbjct: 440 IKYFQRMIEL 449
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 8/173 (4%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL--AKLIESLVNSSQIAYAHLVFNQIIN 93
LL C+ L + + D R +S + + L++ I A VF +I
Sbjct: 360 LLSACSQLGALEM--GMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPE 417
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGV 150
+ + +I G A G I+ + +MI GL PD T+ +L AC G +++ +
Sbjct: 418 KNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEF 477
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMI 202
SL+V + + ++ G + A+ L + M E + V W A+
Sbjct: 478 FSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALF 530
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 272/456 (59%), Gaps = 9/456 (1%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD + D + LI S + A +F+ ++ ++ ++N++I YA G +
Sbjct: 143 FDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEAL 202
Query: 117 QLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
+L+ +M+ G P++ T + C GDL K SL+ + N ++H T L+
Sbjct: 203 RLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQNMIVH--TALMEM 260
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y + A+ FD+M +++VV W+ MI G+ + E ++LF +M+ + + NE+TL
Sbjct: 261 YVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTL 320
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
V VLSACA LG+ ELG + V + L LG+AL DMY KCG++ A VF +
Sbjct: 321 VGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEH 380
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K V TWNS++ GLA++G ++A+ ++ +M ++P+++T +A+LTAC+HAGL+++G
Sbjct: 381 KVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSF 440
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F M+ + V P V+H C+VDLLC++ L EAY+ I +M +EPNAV+W +LL+AC +
Sbjct: 441 FKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAH- 499
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
A+VELA++A +L+ LEP N YVL+SNIYA W D ++R LM+ +N+ K
Sbjct: 500 --ADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAY 557
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
S IE++ VH+F+V D HP S EI+++++ + + L
Sbjct: 558 SWIELDGEVHKFLVQDTYHPKSAEIFNVVDGMGLHL 593
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 143/313 (45%), Gaps = 36/313 (11%)
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
L ++S A +F+ + P+ T+I + + ++ + G D
Sbjct: 29 LSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCV 88
Query: 135 PILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYC---------------- 175
P+++K+C L RQ K VH + + I T L+ FY
Sbjct: 89 PLVVKSCAILAASRQGKQVHCHAI-VRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMP 147
Query: 176 ---------------NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
GDV A+ LFD M + +W +MI + Y+E + LFR+
Sbjct: 148 VKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRR 207
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M G N +T+ ++ S CA G E GKW + + + N + AL +MY KC
Sbjct: 208 MLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQ-DLQNMIVHTALMEMYVKCRA 266
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
I+EA R F + +++V W+++I G A +G E++++F +M+ + KP++VTL+ VL+A
Sbjct: 267 IDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSA 326
Query: 341 CSHAGLIEKGKEI 353
C+ G E G +I
Sbjct: 327 CAQLGSDELGGQI 339
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 40/264 (15%)
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
++A+ LFD + +I+ + +++E +D F + G +V + V+ +C
Sbjct: 36 RAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSC 95
Query: 241 ANLGASELGKWVH-------------------EFVNKN----CII-------LNDKLGA- 269
A L AS GK VH +F KN C + + D +
Sbjct: 96 AILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMN 155
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
L Y+K G + +A R+F ++ + +WNS+I A G +EA+++F +M G +P
Sbjct: 156 CLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARP 215
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH---YGCLVDLLCRARLLDEA 386
+ +T+ + + C+ G +E GK R E ++++ + L+++ + R +DEA
Sbjct: 216 NAITIATMFSICAKTGDLETGK-----WARSLIAEQDLQNMIVHTALMEMYVKCRAIDEA 270
Query: 387 YEVIRNMPMEPNAVLWGSLLTACA 410
M + + V W +++ A
Sbjct: 271 RREFDRM-QQRDVVAWSTMIAGYA 293
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 195/574 (33%), Positives = 306/574 (53%), Gaps = 80/574 (13%)
Query: 10 QLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA 69
Q+T T S KNSN T L LQ C K++HAQ+I I DT +A
Sbjct: 13 QITTVTTKFKS-KNSNYKT-----LSALQSCKSTEDLKKIHAQLIITG----QIKDTFIA 62
Query: 70 -KLIESL-VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAG-----------LGHRGI 116
K +ES V++ I YA VF I P ++++ T+IRG+ EA + RG+
Sbjct: 63 TKTVESYAVSARNIDYAFWVFVGINYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGV 122
Query: 117 QL------------------------YTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHS 152
+L + +++ G D FT L+ + H
Sbjct: 123 ELNKFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHL 182
Query: 153 LVVKSKDFNSV-----------------------------IHSLTRLITFYCNFGDVKSA 183
L + + N V + S ++ Y G V A
Sbjct: 183 LFDEMPNHNVVTWNTMITGCFGCGDTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIA 242
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
+ LFD M E++VV+W +MI+ +V+ E ++LF++M +GV + + + S+LSACA +
Sbjct: 243 RSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSIIITSILSACAQI 302
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
GA ++G+W+H ++ ++ + + L AL DMYAKCG I+ A VF + KN+C+WN+++
Sbjct: 303 GALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAML 362
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
GLAIHG G A+++F QM+ +G+ P+D+T +AVL+ACSH G +E+G + F M +++ +
Sbjct: 363 SGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNI 422
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
P V+HYGC+VD+LCR L++EA E+IR MP+EPN V+WG+LL AC + E
Sbjct: 423 TPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVH---GYTNVGED 479
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN-PGCSVIEINDVV 482
+ + KL + G YVL+SNI+AAK+QW++ K R++MK+ + K PG S IE++ VV
Sbjct: 480 VVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMGVEKKIPGYSSIELDSVV 539
Query: 483 HEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
H+F D H E+ +++E + L + Y A
Sbjct: 540 HDFFAEDRLHSKWREVSTVIERLNTHLEVKGYEA 573
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 271/459 (59%), Gaps = 39/459 (8%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKACGDLR 145
VF ++ ++N +I GY + + ++ +M + L P+ T L AC L+
Sbjct: 189 VFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALK 248
Query: 146 QV---KGVHSLVVKSKDFN-----------------------------SVIHSLTRLITF 173
+ K +H V + F + T +++
Sbjct: 249 MLELGKEIHRYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSG 308
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y N G + A+ LF++ ++VV WTAMING+V+ + + + LFR+M+ V + TL
Sbjct: 309 YVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTL 368
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
V++L+ CA LG E GKW+H ++++N I+++ +G AL +MYAKCG+IE++L +F + E
Sbjct: 369 VALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKE 428
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K+ +W SII GLA++G +A+++F +M +G+KPDD+T I VL+ACSH GL+E+G++
Sbjct: 429 KDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKH 488
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV---LWGSLLTACA 410
F +M Y++EP ++HYGCL+DLL RA LDEA E+I P N V L+G+LL+AC
Sbjct: 489 FRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACR 548
Query: 411 SADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN 470
+ NVE+ E +RL+ +E + + L++NIYA+ +W+D K+RR MK+ + K
Sbjct: 549 TH---GNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKV 605
Query: 471 PGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
PGCS +E+N +VHEF+VGD HP EIYSML+ +A L
Sbjct: 606 PGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKPL 644
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/461 (29%), Positives = 230/461 (49%), Gaps = 56/461 (12%)
Query: 10 QLTHFTNSANSHKNSNTATKSHHH----LPLLQKCTHLVQFKQVHAQIIKASFDNRTISD 65
QL FT+ K + +T SH + LL+ C + KQ+ QI++ F S
Sbjct: 8 QLFKFTSLHFLSKPLHLSTSSHFTKKSCIFLLKNCKSMQHLKQIQTQILRTGFHQ---SG 64
Query: 66 TQLAKLIESLVNSS--QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI 123
L K + + S + YA +FN I P F +N VI+ + + G + + L+ Q+
Sbjct: 65 DTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLR 124
Query: 124 GNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGD 179
GL PD+FTYP + KA G++R+ + V+ VVKS +F++ + L+ Y G
Sbjct: 125 EEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLEFDTYV--CNSLMDMYAEVGR 182
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLS 238
V++ + +F++M +++VV+W +I+G+VK + Y + +D+FR+M + S + NE T+VS LS
Sbjct: 183 VQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLS 242
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
AC L ELGK +H +V + + K+G AL DMY KCG++ A +F + K V
Sbjct: 243 ACIALKMLELGKEIHRYVREQ-LGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVIC 301
Query: 299 WNSIIGGLAIHGCGE---------------------------------EAVKMFWQMQMS 325
W S++ G CG+ +AV +F +MQ+
Sbjct: 302 WTSMVSGYV--NCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIK 359
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
+ PD TL+A+LT C+ G +E+GK I + + K+ + L+++ + +++
Sbjct: 360 RVSPDRFTLVALLTGCAQLGTLEQGKWI-HGYIDENKIMIDAVVGTALIEMYAKCGFIEK 418
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
+ E+ + E + W S++ C A +G + E+ E
Sbjct: 419 SLEIFNGLK-EKDTASWTSII--CGLAMNGKTSKALELFAE 456
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 171/338 (50%), Gaps = 19/338 (5%)
Query: 136 ILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN--FGDVKSAQLLFDQMTEK 193
LLK C ++ +K + + ++++ F+ +L + + + G++ A+ +F+ +
Sbjct: 37 FLLKNCKSMQHLKQIQTQILRT-GFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIP 95
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
+ + +I K ++R+ + LFR++R+ G+ + T V A LG G+ V+
Sbjct: 96 GLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVY 155
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
FV K+ + + + +L DMYA+ G ++ +VF+ + +++V +WN +I G E
Sbjct: 156 GFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYE 215
Query: 314 EAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC 372
+AV +F +M Q S ++P++ T+++ L+AC ++E GKEI +R +K
Sbjct: 216 DAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGF--TIKIGNA 273
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA---CASADDGANVELAEIAMERLI 429
LVD+ C+ L A E+ +MP++ + W S+++ C D+ EL E + R +
Sbjct: 274 LVDMYCKCGHLSIAREIFNDMPIK-TVICWTSMVSGYVNCGQLDEAR--ELFERSPVRDV 330
Query: 430 KLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
L + M N Y ++DDA + R M+ + +
Sbjct: 331 VL-------WTAMINGYVQFNRFDDAVALFREMQIKRV 361
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 34 LPLLQKCTHLVQFKQ---VHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFN 89
+ LL C L +Q +H I +N+ + D + LIE I + +FN
Sbjct: 369 VALLTGCAQLGTLEQGKWIHGYID----ENKIMIDAVVGTALIEMYAKCGFIEKSLEIFN 424
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
+ T ++ ++I G A G + ++L+ +M+ G+ PD T+ +L AC
Sbjct: 425 GLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSAC 476
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/466 (36%), Positives = 266/466 (57%), Gaps = 37/466 (7%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
L++ + I A +F++ ++ + +NT++ YA GL + + +M+ G PD
Sbjct: 273 LVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPD 332
Query: 131 SFTYPILLKACG---DLRQVKGVHSLVVKS--------------------------KDF- 160
T + A DL K H V+++ + F
Sbjct: 333 RVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFD 392
Query: 161 ---NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
N + S L + GDV+SA +F+Q+ E+N V W MI+G V++ + + I+L
Sbjct: 393 LMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIEL 452
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
FR+M+ G++ + +T++ + SAC LGA EL KWVH ++ KN I + +L AL DM+A+
Sbjct: 453 FREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFAR 512
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG + A++VF + E++V W + IG +A+ G GE A +F QM + G+KPD V + V
Sbjct: 513 CGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQV 572
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
LTACSH G +E+G IF ++ D+ + P ++HYGC+VDLL RA LL EA+++I++MPMEP
Sbjct: 573 LTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEP 631
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
N V+WGSLL AC NVE+A A ER+ +L P G +VL+SNIYA+ +W D +
Sbjct: 632 NDVVWGSLLAACRVHK---NVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVAR 688
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
+R ++E+ + K PG S +++N V+HEF GD HP I ML+
Sbjct: 689 VRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQ 734
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 205/429 (47%), Gaps = 40/429 (9%)
Query: 18 ANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVN 77
A K ++ TK L+ C L Q KQ+H QI K D + T+L + +
Sbjct: 13 ATQIKEADPMTKDSCLNESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIAS 72
Query: 78 SSQIAYAHLVFNQI-----INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSF 132
+ YA F + + F N++IRGY+ AGLG I LY +M+ G+ P+ +
Sbjct: 73 PESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHY 132
Query: 133 TYPILLKACGDLRQV-KG--VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
T+P +L C + +G VH VVK + LI FY G + +F+
Sbjct: 133 TFPFVLSGCTKIAAFCEGIQVHGSVVK-MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEG 191
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
M+E+NVV+WT++I G+ + +E + LF +M ++G+ + +T+V V+SACA L ++G
Sbjct: 192 MSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMG 251
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
+ V ++ + + LN + AL DMY KCG I+ A R+F +++N+ +N+I+ A
Sbjct: 252 ERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQ 311
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS-----------HAGLIEKGKE------ 352
G EA+ + +M G +PD VT+++ ++A + H +I G E
Sbjct: 312 GLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIG 371
Query: 353 -IFYNMRR------------DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
+ +M D V + L R ++ A+EV +P E NA
Sbjct: 372 NVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIP-ERNA 430
Query: 400 VLWGSLLTA 408
V W ++++
Sbjct: 431 VFWNTMISG 439
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 186/425 (43%), Gaps = 42/425 (9%)
Query: 28 TKSHHHLP-LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAY 83
T +H+ P +L CT + F QVH ++K + L I + +
Sbjct: 128 TPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCL---IHFYAECGHMDH 184
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
H VF + + ++ ++I GYA + L+ +M+ G+ P S T ++ AC
Sbjct: 185 GHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAK 244
Query: 144 LRQVKGVHSLVVKSKDFNSVIHSL--TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
LR + + + ++ + L+ Y G + +A+ LFD+ ++N+V + +
Sbjct: 245 LRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTI 304
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
++ + +Q RE + + +M G + +T++S +SA A L GK H +V +N +
Sbjct: 305 LSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGL 364
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKI------------------------------- 290
D +G + DMY KCG E A RVF +
Sbjct: 365 EGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQ 424
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+ E+N WN++I GL E+A+++F +MQ GIK D VT++ + +AC + G E
Sbjct: 425 IPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELA 484
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
K + + ++ + +++ LVD+ R A +V M E + W + + A
Sbjct: 485 KWVHTYIEKN-GIPCDMRLNTALVDMFARCGDPQSAMQVFNKMT-ERDVSAWTAAIGTMA 542
Query: 411 SADDG 415
+G
Sbjct: 543 MEGNG 547
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 280 YIEEALRVFK--IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
Y +A +FK + + + NS+I G + G G EA+ ++ +M + G+ P+ T V
Sbjct: 78 YARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFV 137
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
L+ C+ +G ++ ++ + +E +V CL+ +D ++V M E
Sbjct: 138 LSGCTKIAAFCEGIQVHGSVVK-MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMS-ER 195
Query: 398 NAVLWGSLLTACASAD 413
N V W SL+ A D
Sbjct: 196 NVVSWTSLICGYARGD 211
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/477 (38%), Positives = 274/477 (57%), Gaps = 36/477 (7%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI V I A +F+ I + + ++N++I GYA G L+ +M G++PD
Sbjct: 129 LIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPD 188
Query: 131 SFTYPILLKACGDLR------------QVKGVH----------SLVVKSKDFNSV----- 163
FT+ LL C R ++ GV + K + +S
Sbjct: 189 GFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFD 248
Query: 164 ------IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
+ S T +I+ Y G ++ A+ +FDQM KNVV+W +MI+ ++++ YRE +DL
Sbjct: 249 RTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDL 308
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
F KMR+S V +E TLVS+L+AC+ LG +GK +H ++ N L +L DMYAK
Sbjct: 309 FNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAK 368
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG + AL +F + KN+ +WN IIG LA+HGCG EA+K+F +MQ G PD++TL +
Sbjct: 369 CGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGL 428
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
L+ACSH+GL++ G F M Y+V ++HY C+VDLL R LL EA E+I MPM+P
Sbjct: 429 LSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKP 488
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
+ V+WG+LL AC NVE+ + +++L++LEP + G YVL+SNIY +W+D K
Sbjct: 489 DVVVWGALLGACRIH---GNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKK 545
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+R+LM +R I K S IEI+ ++EFMV D RH S IY+ML+ + LR Y
Sbjct: 546 IRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAGY 602
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 205/401 (51%), Gaps = 42/401 (10%)
Query: 46 FKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
K +HAQII N T++ L KLI ++ ++ + YA +F+QI P+ F +N++I
Sbjct: 4 LKLLHAQIILHGLTNETLT---LGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLI 60
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDF 160
RGY+ + + L+ +MI +GL P+ FT P +LKACG + VH L +K
Sbjct: 61 RGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIK-LGI 119
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
S++ LI Y G + A+ LFD +T+K +V+W +MI G+ N++E LFRK
Sbjct: 120 GSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRK 179
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
MR+ G+E + T V++LS C+ +LG++VH + + ++ + AL DMYAKCG
Sbjct: 180 MREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGN 239
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE--------------------------- 313
+ A +F EKNV +W S+I A HG E
Sbjct: 240 LHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLRE 299
Query: 314 ----EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
EA+ +F +M+ S + PD+ TL+++L ACS G + GK+I +N K V
Sbjct: 300 GQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKI-HNYILSNKGAYGVTL 358
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
Y L+D+ + + A ++ MP + N V W ++ A A
Sbjct: 359 YNSLIDMYAKCGPVVTALDIFLEMPGK-NLVSWNVIIGALA 398
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 282/505 (55%), Gaps = 48/505 (9%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q KQ+HA ++ D + L++ L+ + YA +F+ NP F +N +I+
Sbjct: 3 QIKQLHAHCLRTGVD-------ETKDLLQRLLLIPNLVYARKLFDLHRNPCIFLYNKLIQ 55
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVVKSKDFN 161
Y+ H I LY + +G+ P+ T+ + A R ++ +HS +S F
Sbjct: 56 SYSVHHQPHESIVLYNLLSFDGIRPNHHTFNFIFAASASFSSARPLRLLHSQFFRS-GFE 114
Query: 162 SVIHSLTRLITFYCNFG-------------------------------DVKSAQLLFDQM 190
S T LIT Y G D+K+A LFD M
Sbjct: 115 SDSFCCTALITAYAKLGALCCARRVFDEMSNRDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELG 249
KNV +WT +I+G + NY E + +F M +D V+ N +TLVSVL ACANLG E+G
Sbjct: 175 PNKNVTSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITLVSVLPACANLGELEIG 234
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGGLAI 308
+ + + +N N + A +MY+KCG I+ A R+F +I ++N+ +WNS+IG LA
Sbjct: 235 RRLEGYARENGFFDNIYVRNATLEMYSKCGMIDVAKRLFDEIGNQRNLISWNSMIGSLAT 294
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
HG +EA++++ QM G +PD VT + +L AC H G++ KGKE+ +M +K+ P ++
Sbjct: 295 HGKHDEALELYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGKELLKSMEEVHKISPKLE 354
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HYGC++DLL R L EA ++I+ MPM+P+AV+WG+LL AC+ NVE+AEIA E L
Sbjct: 355 HYGCMIDLLGRVGKLQEACDLIKTMPMKPDAVVWGTLLGACSFH---GNVEIAEIASEAL 411
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS-VIEINDVVHEFMV 487
+KLEP N GN V+MSNIYAA +WD +MR+LMK+ + K G S +E VH+F V
Sbjct: 412 MKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEAGVEVHKFTV 471
Query: 488 GDGRHPCSEEIYSMLEYVAISLREE 512
D HP S EIY +L+ ++ ++ E
Sbjct: 472 EDKSHPRSYEIYQVLDEISRRMKPE 496
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/437 (38%), Positives = 264/437 (60%), Gaps = 9/437 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I+ + A +F+++ + +++ +I Y G G + + L+ M+ +G+ PD
Sbjct: 172 MIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPD 231
Query: 131 SFTYPILLKACGDLRQV---KGVHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
T LL AC DL+ + + +H +V K D + + L+ Y +++ A+ L
Sbjct: 232 KITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFV--CAALVDMYGKCREIEDARFL 289
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD+M E+++VTWT MI G+ + N E + LF KMR+ GV +++ +V+V+ ACA LGA
Sbjct: 290 FDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAM 349
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
+ + +++ + L+ LG A+ DM+AKCG +E A +F + EKNV +W+++I
Sbjct: 350 HKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAY 409
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
HG G +A+ +F M SGI P+ +TL+++L ACSHAGL+E+G F M DY V +
Sbjct: 410 GYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRAD 469
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
VKHY C+VDLL RA LDEA ++I +M +E + LWG+ L AC + D V LAE A
Sbjct: 470 VKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKD---VVLAEKAAT 526
Query: 427 RLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFM 486
L++L+P N G+Y+L+SNIYA +W+D K R LM +R + K PG + IE+++ H+F
Sbjct: 527 SLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFS 586
Query: 487 VGDGRHPCSEEIYSMLE 503
VGD HP S+EIY ML+
Sbjct: 587 VGDTTHPRSKEIYEMLK 603
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 182/322 (56%), Gaps = 15/322 (4%)
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVK-S 157
++ G+A+ G + ++I G PD++T P +++AC DL+ + + +H +V K
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
D + + L+ Y +++ A+ LFD+M E+++VTWT MI G+ + E + L
Sbjct: 61 LDLDHFV--CAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVL 118
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
F KMR+ GV +++ +V+V+ ACA LGA + + +++ + L+ LG A+ DMYAK
Sbjct: 119 FEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAK 178
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG +E A +F + EKNV +W+++I HG G +A+ +F M SG+ PD +TL ++
Sbjct: 179 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASL 238
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC--LVDLLCRARLLDEAYEVIRNMPM 395
L ACS ++ G+ I + + YK ++ H+ C LVD+ + R +++A + MP
Sbjct: 239 LYACSDLKNLQMGRLIHHIV---YKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMP- 294
Query: 396 EPNAVLWGSLLTA---CASADD 414
E + V W ++ C +A++
Sbjct: 295 ERDLVTWTVMIGGYAECGNANE 316
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 184/342 (53%), Gaps = 4/342 (1%)
Query: 69 AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD 128
A L++ V +I A +F+++ + +I GYAE G + + L+ +M G+
Sbjct: 69 AALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 128
Query: 129 PDSFTYPILLKACGDLRQVKGVHSL--VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
PD ++ AC L + + ++ K F + T +I Y G V+SA+ +
Sbjct: 129 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 188
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD+M EKNV++W+AMI + R+ +DLFR M SG+ +++TL S+L AC++L
Sbjct: 189 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNL 248
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
++G+ +H V K + L+ + AAL DMY KC IE+A +F + E+++ TW +IGG
Sbjct: 249 QMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGY 308
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
A G E++ +F +M+ G+ PD V ++ V+ AC+ G + K + I ++R K + +
Sbjct: 309 AECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRK-KFQLD 367
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
V ++D+ + ++ A E+ M E N + W +++ A
Sbjct: 368 VILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAA 408
>gi|225451435|ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/449 (37%), Positives = 278/449 (61%), Gaps = 10/449 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L KCT + Q KQ+HAQ+I ++ + + ++L +L S ++YA +FN P+
Sbjct: 32 LADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFC-ALSESGDLSYALRLFNNTQEPN 90
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHS 152
+F +NT+IR +A + + LY M + P T+P LLKAC + + ++ VH+
Sbjct: 91 SFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQVHT 150
Query: 153 LVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
V+K D N +H + L+ Y DV++A+ +FD+++E+++ WT MI+G+ +
Sbjct: 151 HVLKFGLDLN--LHVVNGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCS 208
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
E ++LF +M G+E N TL SVLSACA G +LG+ +H F+ + I + LG AL
Sbjct: 209 NEALELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTAL 268
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
MYAK G I A ++F + E+N TWN++I GLA+HG +EA+ FW+++ I P+D
Sbjct: 269 VHMYAKNGAILMAQKLFDTISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPND 328
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
+T + VL+AC HAGL+ G++IF+ M+R Y +EP ++HYGC+VDLL R L EA E+I+
Sbjct: 329 ITFVGVLSACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIK 388
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
M + + V+ G+LL +C + N+E+AE ++ ++ LEP N G YV++SN+YA +
Sbjct: 389 GMAWKADVVILGALLGSC---KNHGNIEIAERVVKEILVLEPHNHGVYVVLSNMYAEAGR 445
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEIND 480
W+D ++R++MK N+ K PG S+++ ++
Sbjct: 446 WEDVLRLRKVMKSGNLKKTPGWSLVDSDN 474
>gi|449436789|ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/402 (40%), Positives = 253/402 (62%), Gaps = 8/402 (1%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A L F I P F N++IR ++ + + H + LYT M N + P+++T+P +LK+ D
Sbjct: 63 AFLFFTHIPKPHVFICNSLIRAFSHSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKSLAD 122
Query: 144 LRQVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
+ + G VH+ VVKS S ++ L+ Y + G + + +FD+M +VV+WT
Sbjct: 123 FKDLVGGQSVHTHVVKSGH-ASDLYVQNTLMDVYASCGKMGLCKKVFDEMLHTDVVSWTI 181
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
+I G+ + + +F +M+ +GV+ N +T+V+ L+ACA+ GA E+G W+HEFV
Sbjct: 182 LIMGYRVSFMLDDALIVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIHEFVKTKR 241
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
++ LG AL DMY KCG I+EAL VF+ + EKNV TWN I GLA CGEEA+ F
Sbjct: 242 WEVDVVLGTALIDMYGKCGRIKEALAVFQAMKEKNVYTWNVFINGLASAKCGEEAIAWFK 301
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLVDLLCR 379
+M G++ DDVTL+AVL+ACSH+GL+ G++IF+++ + P +KHY C+VD+L R
Sbjct: 302 RMDEEGVEADDVTLVAVLSACSHSGLVNSGRQIFWSLIHGRFGFSPGIKHYSCMVDILAR 361
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
++EA +I++MP E +WGSLLT + ++E++EIA RL+++EP N G Y
Sbjct: 362 NGCIEEACVMIKDMPFEATRSMWGSLLTGSRAH---GSLEVSEIAARRLVEMEPENGGYY 418
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
V++SNIYA +W + K+R +MKER + K+ G S +E+ +V
Sbjct: 419 VVLSNIYAEMGKWSEVEKVREIMKERGLKKDLGSSSVELQEV 460
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 152/323 (47%), Gaps = 28/323 (8%)
Query: 8 NSQLTHFTNSANSHKNSNTATKSHHHLPLLQKC----THLVQFKQVHAQIIKASF-DNRT 62
+S++ H +H N N+ + +++ P + K LV + VH ++K+ +
Sbjct: 87 HSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKSLADFKDLVGGQSVHTHVVKSGHASDLY 146
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
+ +T L++ + ++ VF+++++ ++ +I GY + + + ++ QM
Sbjct: 147 VQNT----LMDVYASCGKMGLCKKVFDEMLHTDVVSWTILIMGYRVSFMLDDALIVFEQM 202
Query: 123 IGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
G+DP+ T L AC ++ +H VK+K + + T LI Y G
Sbjct: 203 QYAGVDPNRVTIVNALAACASFGAIEMGVWIHEF-VKTKRWEVDVVLGTALIDMYGKCGR 261
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
+K A +F M EKNV TW ING K E I F++M + GVE +++TLV+VLSA
Sbjct: 262 IKEALAVFQAMKEKNVYTWNVFINGLASAKCGEEAIAWFKRMDEEGVEADDVTLVAVLSA 321
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLG--------AALTDMYAKCGYIEEALRVFK-I 290
C++ G G+ + +++ + G + + D+ A+ G IEEA + K +
Sbjct: 322 CSHSGLVNSGRQIF------WSLIHGRFGFSPGIKHYSCMVDILARNGCIEEACVMIKDM 375
Query: 291 VLEKNVCTWNSIIGGLAIHGCGE 313
E W S++ G HG E
Sbjct: 376 PFEATRSMWGSLLTGSRAHGSLE 398
>gi|357467379|ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 566
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/491 (37%), Positives = 287/491 (58%), Gaps = 27/491 (5%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNS--SQIAYAHLVFNQIINPS--TFA 98
+ Q Q+HAQ IK+ + +KL S + YA L+ N NPS ++
Sbjct: 1 MSQALQLHAQFIKSQ------NQRNFSKLFTFAAQSPSGDLNYARLLLN--TNPSLNSYY 52
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMI------GNGLDPDSFTYPILLKACGDLR---QVKG 149
+NT+IR Y+ Q + I N PD+FTY LK+CG L+ Q K
Sbjct: 53 YNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDTFTYSFALKSCGRLKLTQQAKQ 112
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H + K F ++ LI Y G++ A+ +FD+M+ ++VV+WT+MI G V
Sbjct: 113 LHGFINKM-GFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHH 171
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E I LF++M + GV+VNE T++SVL CA+ GA +G+ VH V + I +
Sbjct: 172 LTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCT 231
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL MY+KCG +E A VF VL+++V W ++I GLA HG +EA+++F +M+ +KP
Sbjct: 232 ALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKP 291
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D+ T++ VL+A +AGL+ +G F ++++ Y ++PN+KH+GC+VDLL + L+EA +
Sbjct: 292 DERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDF 351
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME--RLIKLEPFNDGNYVLMSNIYA 447
I MPM+P+AV+W +L+ AC A+ E AE M+ L + + G+Y+L SN+YA
Sbjct: 352 INAMPMKPDAVIWRTLIWACKVH---ADTERAERLMKHLELQGMSAHDSGSYILASNVYA 408
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
+ +W D ++R LM ++ +VK PG S IE++ VVHEF++GD HP +E+I+ L+ +
Sbjct: 409 STGKWCDKAEVRELMNKKGLVKPPGSSRIEVDGVVHEFVMGDYDHPDTEKIFIKLDQMVD 468
Query: 508 SLREECYAARM 518
LR+E Y ++
Sbjct: 469 KLRKEGYNPKV 479
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 284/509 (55%), Gaps = 39/509 (7%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINP 94
LL C L + ++HA ++A D +R + +L + S ++ + +P
Sbjct: 41 LLTGCATLRRTGELHAAAVRAGVDGDRAVG----FRLQRAYAASDRLDLTVTLLRLTPDP 96
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHS-- 152
+T + + I ++ GL + L ++M+G GL P S T L AC L + +H+
Sbjct: 97 TTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHGLALGRALHAYA 156
Query: 153 -----------------LVVKSKDFNSV-----------IHSLTRLITFYCNFGDVKSAQ 184
+ + D ++ + +T ++T Y G + A+
Sbjct: 157 FKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDAR 216
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
LFD M K+ + W AMI+G+ + E + LFR M SGV+ +E+ ++ LSA A LG
Sbjct: 217 ELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLG 276
Query: 245 ASELGKWVHEFV-NKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
+E G+W+H +V N + LN ++G AL DMY KCG +E+A+ VF + +K++ WN++I
Sbjct: 277 TAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMI 336
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
G A+HG +A++MF Q++ G+ P D+T I +L ACSH+GL+++G + F +M +Y +
Sbjct: 337 NGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAI 396
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
P ++HYGC+VDLL RA L++EA+ ++++M + P+ V+W SLL AC N+ L +
Sbjct: 397 VPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHK---NMALGQQ 453
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVH 483
+ L+ N G Y+L+SNIYAA W++ ++R +MK I K PGCS IE+ V+
Sbjct: 454 IADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVY 513
Query: 484 EFMVGDGRHPCSEEIYSMLEYVAISLREE 512
EF+ GD HP ++EIY+MLE + ++E+
Sbjct: 514 EFVAGDMSHPRTDEIYAMLEKMNGIVKEQ 542
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 284/509 (55%), Gaps = 39/509 (7%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINP 94
LL C L + ++HA ++A D +R + +L + S ++ + +P
Sbjct: 40 LLTGCATLRRTGELHAAAVRAGVDGDRAVG----FRLQRAYAASDRLDLTVTLLRLTPDP 95
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHS-- 152
+T + + I ++ GL + L ++M+G GL P S T L AC L + +H+
Sbjct: 96 TTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHGLALGRALHAYA 155
Query: 153 -----------------LVVKSKDFNSV-----------IHSLTRLITFYCNFGDVKSAQ 184
+ + D ++ + +T ++T Y G + A+
Sbjct: 156 FKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDAR 215
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
LFD M K+ + W AMI+G+ + E + LFR M SGV+ +E+ ++ LSA A LG
Sbjct: 216 ELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLG 275
Query: 245 ASELGKWVHEFV-NKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
+E G+W+H +V N + LN ++G AL DMY KCG +E+A+ VF + +K++ WN++I
Sbjct: 276 TAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMI 335
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
G A+HG +A++MF Q++ G+ P D+T I +L ACSH+GL+++G + F +M +Y +
Sbjct: 336 NGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAI 395
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
P ++HYGC+VDLL RA L++EA+ ++++M + P+ V+W SLL AC N+ L +
Sbjct: 396 VPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHK---NMALGQQ 452
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVH 483
+ L+ N G Y+L+SNIYAA W++ ++R +MK I K PGCS IE+ V+
Sbjct: 453 IADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVY 512
Query: 484 EFMVGDGRHPCSEEIYSMLEYVAISLREE 512
EF+ GD HP ++EIY+MLE + ++E+
Sbjct: 513 EFVAGDMSHPRTDEIYAMLEKMNGIVKEQ 541
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/504 (35%), Positives = 282/504 (55%), Gaps = 43/504 (8%)
Query: 49 VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE 108
VHAQ K + + + V I A VF+ I + ++N++I GY++
Sbjct: 156 VHAQSFKLGMGSHACVQNAILNI---YVACGLITSARRVFDDISERTLVSWNSMINGYSK 212
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVH-SLVVKSKDFNSVI 164
G + ++ +M GL+PD FT LL G+ + VH +VV + +S++
Sbjct: 213 MGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIV 272
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMING-------------------- 204
+ L+ Y G++K A+ +FDQM +K+VV+WT MIN
Sbjct: 273 TN--ALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGK 330
Query: 205 -----------HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
HV++ Y E +DLF +M DSGV N+ TLV++LS+C+++G LGK H
Sbjct: 331 NVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAH 390
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
++ N I L+ L A+ DMYAKCG ++ A+ VF + EKN +WN IIG LA+HG G+
Sbjct: 391 SYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGK 450
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
EA++MF +MQ SG+ PD++T +L+ACSH+GL++ G+ F M + + P+V+HY C+
Sbjct: 451 EAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACM 510
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
VDLL R LL EA +I+ MP++P+ V+W +LL AC + N+ + + M++L++L
Sbjct: 511 VDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTY---GNLAIGKQIMKQLLELGR 567
Query: 434 FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHP 493
+N G YVL+SN+Y+ +WDD + +++ + I K S IEI+ ++FMV D RH
Sbjct: 568 YNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDDKRHG 627
Query: 494 CSEEIYSMLEYVAISLREECYAAR 517
S IYSML + L+ Y +
Sbjct: 628 ASTSIYSMLGQLMDHLKSAGYPCK 651
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 212/412 (51%), Gaps = 46/412 (11%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L+ +C L Q K VHAQII + ++ L KL+ S V + YAH +F+QI P+
Sbjct: 42 LIDQCISLKQLKHVHAQIILHGLATQVLT---LGKLVSSSVQLRDLRYAHKLFDQIPQPN 98
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSL-- 153
F FN +I+GY+ + + + LY +M+ +G+ P+ FT P +LKAC K + L
Sbjct: 99 KFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACA----AKSCYWLGV 154
Query: 154 VVKSKDFNSVIHS----LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
V ++ F + S ++ Y G + SA+ +FD ++E+ +V+W +MING+ K
Sbjct: 155 CVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMG 214
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E + +FR+M++ G+E + TLV +LS G +LG++VH + I ++ +
Sbjct: 215 RSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTN 274
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG---CG-------------- 312
AL DMYAKCG ++ A VF +L+K+V +W +I A HG C
Sbjct: 275 ALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVS 334
Query: 313 --------------EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
EAV +F++M SG+ +D TL+A+L++CSH G + GK+ ++
Sbjct: 335 WNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQA-HSYI 393
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
D + + ++D+ + L A +V MP E NAV W ++ A A
Sbjct: 394 FDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMP-EKNAVSWNVIIGALA 444
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 148/324 (45%), Gaps = 32/324 (9%)
Query: 113 HRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLIT 172
H Q+ ++ P T L+ C L+Q+K VH+ ++ V+ +L +L++
Sbjct: 18 HTETQISKTILQELKSPTHQTLHYLIDQCISLKQLKHVHAQIILHGLATQVL-TLGKLVS 76
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
D++ A LFDQ+ + N + +I G+ + + + L+R+M G+ N+ T
Sbjct: 77 SSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFT 136
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
+ VL ACA LG VH K + + + A+ ++Y CG I A RVF +
Sbjct: 137 IPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDIS 196
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
E+ + +WNS+I G + G EEAV MF +MQ G++PD TL+ +L+ + G + G+
Sbjct: 197 ERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRF 256
Query: 353 IFYNM------------------------------RRDYKVEPNVKHYGCLVDLLCRARL 382
+ +M D ++ +V + C+++ L
Sbjct: 257 VHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGL 316
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLL 406
+D A E MP + N V W S++
Sbjct: 317 IDCALEFFNQMPGK-NVVSWNSII 339
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 120/285 (42%), Gaps = 47/285 (16%)
Query: 34 LPLLQKCTHLVQF---KQVHAQIIKASFDNR-TISDTQLAKLIESLVNSSQIAYAHLVFN 89
+ +L C+H+ KQ H+ I FDN T+S T +I+ + A VF
Sbjct: 371 VAILSSCSHMGDLALGKQAHSYI----FDNNITLSATLCNAIIDMYAKCGALQTAMDVFF 426
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG 149
+ + ++N +I A G G I+++ +M +G+ PD T+ LL AC
Sbjct: 427 GMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACS------- 479
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
HS +V + I +LT I+ DV+ + D + + ++
Sbjct: 480 -HSGLVDTGQHYFEIMNLTFGIS-----PDVEHYACMVDLLGRRGLLG------------ 521
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL---NDK 266
E I L +KM V+ + + ++L AC G +GK + K + L N
Sbjct: 522 ---EAISLIKKMP---VKPDVVVWSALLGACRTYGNLAIGKQIM----KQLLELGRYNSG 571
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
L L++MY++ ++ ++KI L++N I + I GC
Sbjct: 572 LYVLLSNMYSESQRWDDMKNIWKI-LDQNGIKKCRAISFIEIDGC 615
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/503 (34%), Positives = 284/503 (56%), Gaps = 42/503 (8%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINP 94
LL C+ + ++HA +++ + T D +A +L + S ++ + + + +P
Sbjct: 295 LLTSCSTARRAAELHAAVLRTGLLDAT--DRAVAFRLQRAYAASGRLDLSLALLRRTRDP 352
Query: 95 STFAFNTVIRGYAEAGLGHR--GIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHS 152
+ + + I +A + GHR + L + M+ GL P + T L AC L + +H
Sbjct: 353 TAIFYTSAI--HAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPACRGLSPGRALHG 410
Query: 153 -------------------LVVKSKDFNSV------------IHSLTRLITFYCNFGDVK 181
+ ++ D + + S+T ++T Y + G +
Sbjct: 411 YAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALD 470
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
A+ LFD + K+ V W AMI+G+ + E + LFR+M SGVE +E+T+V VLSA A
Sbjct: 471 DARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVA 530
Query: 242 NLGASELGKWVHEFV-NKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
LG E GKW+H +V N + L+ ++G AL DMY KCG + +A+ VF + +K++ WN
Sbjct: 531 QLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWN 590
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
++I G A+HG +A++MF Q + G+ P D+T I +L ACSH+G++E+G+E F +M R+
Sbjct: 591 AMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMERE 650
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
Y ++P ++HYGC+VDLL RA L+ EA+ ++++M + P+AV+W SLL AC N+ L
Sbjct: 651 YGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHK---NMSL 707
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
+ + L+ N G Y+L+SNIYAA W + ++R +MK I K PGCS IEI+
Sbjct: 708 GQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIEIDR 767
Query: 481 VVHEFMVGDGRHPCSEEIYSMLE 503
V+EF+ GD HP ++EIY ML+
Sbjct: 768 EVYEFVAGDMSHPRTDEIYVMLD 790
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/493 (37%), Positives = 287/493 (58%), Gaps = 14/493 (2%)
Query: 32 HHLPLLQKCT---HLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF 88
++ LLQ C + KQ+HA+I + + T+L L + NS + AHL+F
Sbjct: 3 YYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLY-CICNS--LTNAHLLF 59
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV- 147
++I + F +N +IRGYA G I LY QM GL PD FT+P +LKAC L +
Sbjct: 60 DRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAME 119
Query: 148 --KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
K +H V++S S + LI Y G V+SA+ +FD++ E++VV W +M+ +
Sbjct: 120 EGKKIHKDVIRS-GLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATY 178
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ E + L R M +G++ E T V ++A A+ G GK +H + ++ ND
Sbjct: 179 SQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESND 238
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
K+ AL DMYAK G + A +F+++ EK V +WN++I G A+HG EA+ +F +M+
Sbjct: 239 KVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMK-G 297
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
+ PD +T + VL ACSH GL+ +GK F +M D+ + P V+HY C++DLL L+E
Sbjct: 298 KVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEE 357
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
AY++I M +EP+A +WG+LL +C NVE+ E+A+E+L++LEP + GNYV++SN+
Sbjct: 358 AYKLIMEMRVEPDAGVWGALLHSCKIH---GNVEMGELALEKLVELEPDDGGNYVILSNM 414
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
YA +WD ++R LM + + K+ CS IE+ + VH F+ D HP SE IY+ L+
Sbjct: 415 YAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRT 474
Query: 506 AISLREECYAARM 518
++E YA ++
Sbjct: 475 GKLMKEAGYAPQV 487
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/472 (36%), Positives = 274/472 (58%), Gaps = 13/472 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K+VH QI + F++ L L ++ A +VF + + + ++ ++I GY
Sbjct: 189 KRVHGQIFRLGFESDVFVQNGLVAL---YAKCGRVEQARIVFEGLDDRNIVSWTSMISGY 245
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKGVHSLVVK-SKDFNS 162
+ GL ++++ QM + PD +L+A DL Q K +H VVK +F
Sbjct: 246 GQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEP 305
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ L L Y G V A+ FDQM NV+ W AMI+G+ K E + LF++M
Sbjct: 306 DL--LISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMI 363
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ + +T+ S + ACA +G+ +L KW+ +++NK + + AL DM+AKCG ++
Sbjct: 364 SKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVD 423
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A VF L+K+V W+++I G +HG G++A+ +F+ M+ +G+ P+DVT + +LTAC+
Sbjct: 424 LAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACN 483
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
H+GL+E+G E+F++M+ Y +E +HY C+VDLL R+ L+EAY+ I MP+EP +W
Sbjct: 484 HSGLVEEGWELFHSMKY-YGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVW 542
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL AC +V L E A E+L L+PFN G+YV +SN+YA+ WD K+R LM
Sbjct: 543 GALLGACKIY---RHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILM 599
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+E+ + K+ G S+IEIN + F VGD HP +EI+ LE + L+E +
Sbjct: 600 REKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGF 651
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 196/377 (51%), Gaps = 11/377 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LL H Q+HAQ++ + S + K + + N +I YA VF++ PS
Sbjct: 77 LLDHSVHKRHLNQIHAQLVVSGL---VESGFLVTKFVNASWNIGEIGYARKVFDEFPEPS 133
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHS 152
F +N +IRGY+ I++Y++M +G++PD FT P +LKAC L K VH
Sbjct: 134 VFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHG 193
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
+ + F S + L+ Y G V+ A+++F+ + ++N+V+WT+MI+G+ +
Sbjct: 194 QIFR-LGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPM 252
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E + +F +MR V+ + + LVSVL A ++ E GK +H V K + L +LT
Sbjct: 253 EALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLT 312
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
MYAKCG + A F + NV WN++I G A +G EAV +F +M I+ D +
Sbjct: 313 AMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSI 372
Query: 333 TLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
T+ + + AC+ G ++ K + Y + +Y+ + V L+D+ + +D A EV
Sbjct: 373 TVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVN--TALIDMFAKCGSVDLAREVF- 429
Query: 392 NMPMEPNAVLWGSLLTA 408
+ ++ + V+W +++
Sbjct: 430 DRTLDKDVVVWSAMIVG 446
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/514 (34%), Positives = 298/514 (57%), Gaps = 42/514 (8%)
Query: 27 ATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL 86
++ S L LL KC ++ Q KQ HAQ++K+ N ++L N S +++A
Sbjct: 2 SSSSKRCLLLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGS-LSHAFK 60
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
+F I +P+ FNT+I+ G I +++ + NG+ PD++T P +LKA +
Sbjct: 61 LFQHIQHPTICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTN 120
Query: 147 V---KGVH----------------SLVVKSKDFNSVIH--------------SLTRLITF 173
+ + +H SL+V + F+++ S T +I
Sbjct: 121 IHLGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYG 180
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y N GDV +A+ LFD T K+ W AMI+G+V+ ++EG+ +FR M+ + VE +E +
Sbjct: 181 YANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAII 240
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
V++LSACA++GA + G W+H ++ + + L ++ L DMYAKCG+++ A +F + +
Sbjct: 241 VTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQ 300
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
++ WN++I G+A+ G GE A+K+F +M+ +GIKPD++T IAV ACS++G++++G I
Sbjct: 301 RDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVWXACSNSGMVDEGIRI 360
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN----AVLWGSLLTAC 409
+ M +K+EP +HYGC++DLL R +EA VI+ +P + AV W + L+AC
Sbjct: 361 WNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSAC 420
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
+ AE+A ERL +LE + G YVL+SN+YAA + +DA ++R +MK + + K
Sbjct: 421 CKH---GQTQQAEVAAERLFQLER-HSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEK 476
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
PGCS I++N VV+EF+ G+ H + I+ +LE
Sbjct: 477 VPGCSSIKVNGVVNEFIAGEKTHRHIDNIHLVLE 510
>gi|147769957|emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/449 (37%), Positives = 278/449 (61%), Gaps = 10/449 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L KCT + Q KQ+HAQ+I ++ + + ++L +L S ++YA +FN P+
Sbjct: 34 LADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFC-ALSESGDLSYALRLFNNTQEPN 92
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHS 152
+F +NT+IR +A + + LY M + P T+P LLKAC + + ++ VH+
Sbjct: 93 SFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQVHT 152
Query: 153 LVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
V+K D N +H + L+ Y DV++A+ +FD+++E+++ WT MI+G+ +
Sbjct: 153 HVLKFGLDLN--LHVVNGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCS 210
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
E ++LF +M G+E N TL SVLSACA G +LG+ +H F+ + I + LG AL
Sbjct: 211 NEALELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTAL 270
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
MYAK G I A ++F + E+N TWN++I GLA+HG +EA+ FW+++ I P+D
Sbjct: 271 VHMYAKNGAILMAQKLFDXISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPND 330
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
+T + VL+AC HAGL+ G++IF+ M+R Y +EP ++HYGC+VDLL R L EA E+I+
Sbjct: 331 ITFVGVLSACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIK 390
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
M + + V+ G+LL +C + N+E+AE ++ ++ LEP N G YV++SN+YA +
Sbjct: 391 GMAWKADVVILGALLGSC---KNHGNIEIAERVVKEILVLEPHNHGVYVVLSNMYAEAGR 447
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEIND 480
W+D ++R++MK N+ K PG S+++ ++
Sbjct: 448 WEDVLRLRKVMKSGNLKKTPGWSLVDSDN 476
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/502 (35%), Positives = 285/502 (56%), Gaps = 46/502 (9%)
Query: 36 LLQKCTHLV---QFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQI 91
L + C +LV ++ Q++K FD D L +I LV+ + AH VF++
Sbjct: 160 LFKVCANLVLSYMGFEILGQVLKMGFD----KDMYLYNGIIHMLVSVGESGLAHKVFDEG 215
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK--- 148
++N++I GY + +Y QMI + PD T ++ AC L +K
Sbjct: 216 CVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGR 275
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK- 207
+H + +S N I + L+ Y GD+++ ++LFD M +K VV+WT MI G+ K
Sbjct: 276 EIHRYIEES-GLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKN 334
Query: 208 -----------------------------QKNYR-EGIDLFRKMRDSGVEVNELTLVSVL 237
Q N E ++LFR+M+ S ++ +++T++ L
Sbjct: 335 GLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCL 394
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
SAC+ LGA + G W H ++ K+ + L+ LG AL DMYAKCG + +AL+VF + +N
Sbjct: 395 SACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSL 454
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
TW +IIGGLA++G +A+ F +M SG+ PD++T + VLTAC H GL+E+G++ F M
Sbjct: 455 TWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQM 514
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ + + P KHY C+V+LL RA LL+EA E+I+ MPME +A++WG+L AC N
Sbjct: 515 KSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIH---RN 571
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
+ + E A +L+ L+P + G YVL++N+Y +W++A +R++M ER + K PG S IE
Sbjct: 572 LLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIE 631
Query: 478 INDVVHEFMVGDGRHPCSEEIY 499
+N +++EF+V D HP SE+IY
Sbjct: 632 VNGIINEFIVRDKSHPQSEQIY 653
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 227/450 (50%), Gaps = 58/450 (12%)
Query: 9 SQLTHFTNSANSHKNSNTATKSHHH-------LPLLQKCTHLVQFKQVHAQIIKASFDNR 61
S L+ ++S ++HK++ T+ + H L LL+ C Q KQ+ AQ+I
Sbjct: 25 SCLSLHSHSFSTHKSNPTSWNTTHTYVLSNPLLSLLENCKSFSQLKQIQAQMILTGLILD 84
Query: 62 TISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQ 121
+ ++L ++ S + Y + N + NP+ F++N VIRG E+ +G+ LY +
Sbjct: 85 GFASSRLISFC-AISESRNLDYCIKILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKR 143
Query: 122 MIGN-GLDPDSFTYPILLKACGDL-RQVKGVHSL--VVK---SKD---FNSVIHSLTRLI 171
M+ G PD++TY L K C +L G L V+K KD +N +IH L +
Sbjct: 144 MLTRAGCRPDNYTYSFLFKVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSV- 202
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
G+ A +FD+ +++V+W ++ING+V+++ RE + ++++M V+ +E+
Sbjct: 203 ------GESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEV 256
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE-------- 283
T++ V+SACA L + +LG+ +H ++ ++ + L L AL DMY KCG +E
Sbjct: 257 TMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNM 316
Query: 284 -----------------------ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
A ++F + EKNV WN++IG EA+++F
Sbjct: 317 RKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFR 376
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+MQ S +KPD VT++ L+ACS G ++ G +N + + + +V L+D+ +
Sbjct: 377 EMQWSNMKPDKVTMLHCLSACSQLGALDTGMWT-HNYIKKHNLSLDVALGTALIDMYAKC 435
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ +A +V MP N++ W +++ A
Sbjct: 436 GNMTKALQVFNEMPRR-NSLTWTAIIGGLA 464
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 288/492 (58%), Gaps = 17/492 (3%)
Query: 36 LLQKC---THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L +C T + + ++VHA +IK ++ T+L L + A V +++
Sbjct: 16 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYN---KCRCLGDARRVLDEMP 72
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKG 149
+ ++ +I GY++ G + L+ +M+ +G P+ FT+ +L +C + +
Sbjct: 73 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+HSLV+K+ F S I + L+ Y G + A+ +FD + E++VV+ TA+I+G+ +
Sbjct: 133 IHSLVIKTS-FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLG 191
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E +DLFR+++ G+ N +T SVL+A + L A + G+ VH V + + L
Sbjct: 192 LDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN 251
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIK 328
+L DMY+KCG + + R+F + E+ V +WN+++ G + HG G EAV++F M + + +K
Sbjct: 252 SLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK 311
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNM--RRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
PD VT +AVL+ CSH G+ ++G EIFY M ++D EP ++HYGC+VDL RA ++EA
Sbjct: 312 PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKD-GFEPEIEHYGCVVDLFGRAGRVEEA 370
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
+E I+ MP EP A +WGSLL AC NV + E RL+++E N GNYV++SN+Y
Sbjct: 371 FEFIKKMPFEPTAAIWGSLLGACRVHQ---NVHIGEFVARRLLEIESENAGNYVILSNLY 427
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
A+ +WDD +R LMKE+ ++K PG S IE++ +H F D HP EE+++ + ++
Sbjct: 428 ASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELS 487
Query: 507 ISLREECYAARM 518
I ++E Y +
Sbjct: 488 IKIKEAGYVPEL 499
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 164/306 (53%), Gaps = 7/306 (2%)
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
GL+ + Y +L C +R+ + VH+ ++K+ + ++ TRLI Y +
Sbjct: 4 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTC-YEPPVYLRTRLIVLYNKCRCLG 62
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
A+ + D+M E+NVV+WTAMI+G+ ++ E + LF +M SG NE T +VL++C
Sbjct: 63 DARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCT 122
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
+ +LG+ +H V K + +G++L DMYAK G I EA RVF + E++V + +
Sbjct: 123 SSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTA 182
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
II G A G EEA+ +F ++Q G++ + VT +VLTA S ++ G+++ ++ R
Sbjct: 183 IISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRA- 241
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN-VEL 420
K+ V L+D+ + L + + +MP E + W ++L + G VEL
Sbjct: 242 KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVGYSKHGLGREAVEL 300
Query: 421 AEIAME 426
++ E
Sbjct: 301 FKLMKE 306
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 178/488 (36%), Positives = 287/488 (58%), Gaps = 16/488 (3%)
Query: 34 LPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFN 89
+ +L C+ L Q +Q+H +IIKA + I+D ++ L+ + A VF
Sbjct: 411 MSILGACSRPSALKQGRQIHDRIIKAGY----ITDDRVRTALLSMYAKCGSLMDARNVFE 466
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQ 146
+I + A+N +I Y + + + ++ G+ PDS T+ +L C L
Sbjct: 467 RISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALEL 526
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
K V SL++++ F S +H L++ + N GD+ SA LF+ M E+++V+W +I G V
Sbjct: 527 GKWVQSLIIRA-GFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFV 585
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ + D F+ M++SGV+ +++T +L+ACA+ A G+ +H + + + +
Sbjct: 586 QHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVV 645
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+G L MY KCG I++A VF + +KNV +W S+I G A HG G+EA+++F QMQ G
Sbjct: 646 VGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEG 705
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
+KPD +T + L+AC+HAGLI++G F +M +D+ +EP ++HYGC+VDL RA LL EA
Sbjct: 706 VKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEA 764
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
E I M ++P++ LWG+LL AC D VELAE ++ ++L+P +DG YV++SNIY
Sbjct: 765 VEFINKMQVKPDSRLWGALLGACQVHLD---VELAEKVAQKKLELDPNDDGVYVILSNIY 821
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
AA W + KMR++M +R +VK PG S IE++ VH F D HP EEI++ L +
Sbjct: 822 AAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLH 881
Query: 507 ISLREECY 514
+ +++ Y
Sbjct: 882 MEMKKLGY 889
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 186/329 (56%), Gaps = 8/329 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A +F+++ + +++N ++ GY + +L+ QM+ +G+ PD +T+ +L AC D
Sbjct: 158 AKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACAD 217
Query: 144 LRQV-KG--VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
+ V KG + SL++ + +++ + T LI + G V A +F+ + ++++TWT+
Sbjct: 218 AKNVDKGGELFSLILNA-GWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTS 276
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
MI G + + +++ +LF+ M + GV+ +++ VS+L AC + A E GK VH + +
Sbjct: 277 MITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVG 336
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ +G AL MY KCG +E+AL VF +V +NV +W ++I G A HG EEA F
Sbjct: 337 LDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFN 396
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCLVDLLCR 379
+M SGI+P+ VT +++L ACS +++G++I ++ Y + V+ L+ + +
Sbjct: 397 KMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVR--TALLSMYAK 454
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
L +A V + + N V W +++TA
Sbjct: 455 CGSLMDARNVFERISKQ-NVVAWNAMITA 482
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 174/364 (47%), Gaps = 9/364 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
++ + I+ A +D T LI + + A VFN + + ++I G A
Sbjct: 226 ELFSLILNAGWDTDLFVGT---ALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLA 282
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVI 164
+ L+ M G+ PD + LLKAC L Q K VH+ + K ++ I
Sbjct: 283 RHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARM-KEVGLDTEI 341
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
+ T L++ Y G ++ A +F+ + +NVV+WTAMI G + E F KM +S
Sbjct: 342 YVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIES 401
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
G+E N +T +S+L AC+ A + G+ +H+ + K I +D++ AL MYAKCG + +A
Sbjct: 402 GIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDA 461
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
VF+ + ++NV WN++I H + AV F + GIKPD T ++L C
Sbjct: 462 RNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSP 521
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
+E GK + + R E ++ LV + L A + +MP E + V W +
Sbjct: 522 DALELGKWVQSLIIR-AGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNT 579
Query: 405 LLTA 408
++
Sbjct: 580 IIAG 583
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 177/373 (47%), Gaps = 41/373 (10%)
Query: 133 TYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
TY LL+ C +L + +H+ + SK I LI+ Y G+ SA+ +FD+
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSK-IQPDIFMWNMLISMYAKCGNTNSAKQIFDE 164
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
M +K+V +W ++ G+V+ + Y E L +M GV+ ++ T V +L+ACA+ + G
Sbjct: 165 MPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKG 224
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
+ + + +G AL +M+ KCG +++AL+VF + +++ TW S+I GLA H
Sbjct: 225 GELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARH 284
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR---DYKV--- 363
++A +F M+ G++PD V +++L AC+H +E+GK + M+ D ++
Sbjct: 285 RQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVG 344
Query: 364 ------------------------EPNVKHYGCLVDLLCRARLLDEAYEVIRNM---PME 396
NV + ++ + ++EA+ M +E
Sbjct: 345 TALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIE 404
Query: 397 PNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY-VLMSNIYAAKAQWDDA 455
PN V + S+L AC+ + ++ +R+IK D + ++YA DA
Sbjct: 405 PNRVTFMSILGACSRP---SALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDA 461
Query: 456 GKMRRLMKERNIV 468
+ + ++N+V
Sbjct: 462 RNVFERISKQNVV 474
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 177/499 (35%), Positives = 284/499 (56%), Gaps = 43/499 (8%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
++VHA +++ F S+ L+ V + VF+++ P + +IR Y
Sbjct: 111 EEVHASVVRTGF---ACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAY 167
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSK-DFNS 162
+ ++L+ M GL PD ++ ACG DL K +H + KS + ++
Sbjct: 168 VCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDA 227
Query: 163 VIHSLTRLITFYCNFGDVKSA-------------------------------QLLFDQMT 191
+ S LI+ Y G + A + LF M
Sbjct: 228 FVSS--TLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMP 285
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+++VV+W +MI G + Y+E + F +M SGV N LTL+S LSACA+ GA + G W
Sbjct: 286 DRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAW 345
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+H +V+KN + + L ++L DMY+KCG I++A+++F+ +++ TW SI+ GLA+HG
Sbjct: 346 IHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGR 405
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
GE+A+ F +M+ + ++PDDVT++ VL+AC+HAGL+++G F +M + + + P V+HYG
Sbjct: 406 GEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYG 465
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
+VDLL R L EAY++I MPME N ++WG+ L+AC + NVEL E+A RL+ L
Sbjct: 466 XMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHN---NVELGEVAARRLLGL 522
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
P + V++SN+YA +A+WD + +R+ +K++ + K+PGCS IE+N VH F+VGD
Sbjct: 523 XPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNS 582
Query: 492 HPCSEEIYSMLEYVAISLR 510
HPC EI SM+E + +R
Sbjct: 583 HPCYTEINSMVEKIEKLMR 601
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 184/379 (48%), Gaps = 58/379 (15%)
Query: 63 ISDTQLAKLIESLVNSSQIAYAHL-VFNQIINPST---------FAFNTVIRGYAEAGLG 112
+S T+ + + L N +++ H + +PS F +NT+IR E GL
Sbjct: 11 LSHTRFSFRLHPLTNPNKLPRIHGNTIATVEDPSAASRLDCANVFVWNTMIRKQVENGLI 70
Query: 113 HRGIQL--YTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVIHSL 167
R L Y Q + GL P+ T+ LLKA ++VK VH+ VV++ S S
Sbjct: 71 TRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHASVVRTGFACSEFVS- 129
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
L+ FY G V + +FD+M + +V WT +I +V + ++LFR MR+ G+
Sbjct: 130 GALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLT 189
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+ + + +V+SAC LG + K +H F+ K+ I ++ + + L Y +CG ++ A R
Sbjct: 190 PDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRF 249
Query: 288 FK------IVL-------------------------EKNVCTWNSIIGGLAIHGCGEEAV 316
F+ IV+ +++V +WNS+IGG A G +EA+
Sbjct: 250 FQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEAL 309
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY-----NMRRDYKVEPNVKHYG 371
F +M+ SG+ P+ +TL++ L+AC+ G ++ G I +M RD ++ +
Sbjct: 310 TWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSS----- 364
Query: 372 CLVDLLCRARLLDEAYEVI 390
L+D+ + +D+A ++
Sbjct: 365 -LIDMYSKCGDIDKAVQIF 382
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 4/215 (1%)
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRD--SGVEVNELTLVSVLSACANLGASELGKW 251
NV W MI V+ L M+ +G+ N T + +L A + + G+
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
VH V + ++ + AL Y CG + + +VF + + + W II
Sbjct: 113 VHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTF 172
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
E+A+++F M+ G+ PD V + V++AC G + K + + + +E +
Sbjct: 173 PEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKS-GIEVDAFVSS 231
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
L+ LD AY + PM+ N V+W +++
Sbjct: 232 TLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMI 265
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 179/481 (37%), Positives = 263/481 (54%), Gaps = 7/481 (1%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP + + L Q+H+ K + D L I +I +F +
Sbjct: 228 LPAVAELQELRLGMQIHSLATKTGCYSH---DYVLTGFISLYSKCGKIKMGSALFREFRK 284
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSL 153
P A+N +I GY G + L+ +++ +G S T L+ G L + +H
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGY 344
Query: 154 VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYRE 213
+KS +F S T L T Y +++SA+ LFD+ EK++ +W AMI+G+ + +
Sbjct: 345 CLKS-NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 214 GIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTD 273
I LFR+M+ S N +T+ +LSACA LGA LGKWVH+ V + + AL
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463
Query: 274 MYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVT 333
MYAKCG I EA R+F ++ +KN TWN++I G +HG G+EA+ +F++M SGI P VT
Sbjct: 464 MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVT 523
Query: 334 LIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
+ VL ACSHAGL+++G EIF +M Y EP+VKHY C+VD+L RA L A + I M
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM 583
Query: 394 PMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWD 453
+EP + +W +LL AC D LA E+L +L+P N G +VL+SNI++A +
Sbjct: 584 SIEPGSSVWETLLGACRIHKD---TNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYP 640
Query: 454 DAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREEC 513
A +R+ K+R + K PG ++IEI + H F GD HP +EIY LE + +RE
Sbjct: 641 QAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAG 700
Query: 514 Y 514
Y
Sbjct: 701 Y 701
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 209/483 (43%), Gaps = 65/483 (13%)
Query: 33 HLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L ++ T + Q HAQII F N + L KL + L + I YA +F +
Sbjct: 23 YLDFFKRSTSISHLAQTHAQIILHGFRNDI---SLLTKLTQRLSDLGAIYYARDIFLSVQ 79
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDPDSFTYPILLKACGDLRQVKG-- 149
P F FN ++RG++ H + ++ + L P+S TY + A R +
Sbjct: 80 RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGR 139
Query: 150 -VHS-LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+H VV D ++ S ++ Y F V+ A+ +FD+M EK+ + W MI+G+ K
Sbjct: 140 VIHGQAVVDGCDSELLLGS--NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 208 QKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ Y E I +FR + +S ++ TL+ +L A A L LG +H K +D
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+ +Y+KCG I+ +F+ + ++ +N++I G +G E ++ +F ++ +SG
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 327 IKPDDVTLIAVLTACSHAGL--------------------------------IEKGKEIF 354
+ TL++++ H L IE +++F
Sbjct: 318 ARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF 377
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM---PMEPNAVLWGSLLTACAS 411
D E ++ + ++ + L ++A + R M PN V +L+ACA
Sbjct: 378 -----DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACA- 431
Query: 412 ADDGANVELAEIAMER----LIKLEPFNDGNYV--LMSNIYAAKAQWDDAGKMRRLMKER 465
+L +++ + L++ F YV + +YA +A ++ LM ++
Sbjct: 432 -------QLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
Query: 466 NIV 468
N V
Sbjct: 485 NEV 487
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 178/480 (37%), Positives = 270/480 (56%), Gaps = 64/480 (13%)
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK---ACGDLRQVKGV 150
PS +F+ ++R A +G G + Q++ G + D LL GDL+ K V
Sbjct: 8 PSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRV 67
Query: 151 ---------------------HSLVVKSKD-FNSVIH----SLTRLITFYCNFGDVKSAQ 184
H V ++++ F+++ S +IT YC GD+ SA+
Sbjct: 68 FMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINSAR 127
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKN--------------------------------YR 212
L+FD K+VV+W A+I+G+ K K +
Sbjct: 128 LMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFG 187
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
I +F++M+ V+ E+T+VS+LSACA+LGA ++G+W+H ++ + ++ LG AL
Sbjct: 188 TAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALI 247
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
DMY KCG +E A+ VF + KN+ WNSII GL ++G GEEA+ F M+ GIKPD V
Sbjct: 248 DMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGV 307
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
T + +L+ CSH+GL+ G+ F M Y +EP V+HYGC+VDLL RA L EA E+IR
Sbjct: 308 TFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRA 367
Query: 393 MPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQW 452
MPM+PN+++ GSLL AC D +L E ++L++L+P + GNYV +SN+YA+ ++W
Sbjct: 368 MPMKPNSMVLGSLLRACQIHKD---TKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRW 424
Query: 453 DDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
DD R+LM +R + K PGCS IE+N++VHEF+ GD HP +I + L+ +A L+ +
Sbjct: 425 DDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQ 484
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/453 (38%), Positives = 253/453 (55%), Gaps = 7/453 (1%)
Query: 65 DTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
D L LI + A L+F I P ++N +I G++ G ++ + +++
Sbjct: 239 DYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLV 298
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
+G S T L+ G L + VKS S T L T Y ++
Sbjct: 299 SGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVS-TALTTIYSRLNEID 357
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
A+ LFD+ +EK V W AMI+G+ + I LF++M + N +T+ S+LSACA
Sbjct: 358 LARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACA 417
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
LGA GK VH+ + + N + AL DMYAKCG I EA ++F + EKN TWN+
Sbjct: 418 QLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNT 477
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+I G +HG G+EA+K+F +M G +P VT ++VL ACSHAGL+ +G EIF+ M Y
Sbjct: 478 MIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKY 537
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
++EP +HY C+VD+L RA L++A E IR MP+EP +WG+LL AC D LA
Sbjct: 538 RIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKD---TNLA 594
Query: 422 EIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
+A ERL +L+P N G YVL+SNIY+ + + A +R +K+RN+ K PGC++IE+N
Sbjct: 595 RVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGT 654
Query: 482 VHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
H F+ GD H + IY+ LE + +RE Y
Sbjct: 655 PHVFVCGDRSHSQTTSIYAKLEELTGKMREMGY 687
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 213/473 (45%), Gaps = 49/473 (10%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L L+ K + HAQ+I+ + + + T KL + L + +A +F +
Sbjct: 12 LALISKACTFPHLAETHAQLIRNGYQHDLATVT---KLTQKLFDVGATRHARALFFSVPK 68
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKACGD--LRQVKGV 150
P F FN +I+G++ + I YT ++ N L PD+FTY + A D L
Sbjct: 69 PDIFLFNVLIKGFSFSP-DASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNLGMCLHA 127
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H++V F+S + + L+ YC F V A+ +FD+M +++ V W MI G V+
Sbjct: 128 HAVV---DGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCC 184
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
Y + + +F+ M GV ++ T+ +VL A A + ++G + K +D +
Sbjct: 185 YDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTG 244
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L +++KC ++ A +F ++ + ++ ++N++I G + +G E AVK F ++ +SG +
Sbjct: 245 LISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVS 304
Query: 331 DVTLIAVLT----------ACSHAGLIEKGKEIF-----------------YNMRR---D 360
T++ ++ AC G K I ++ R D
Sbjct: 305 SSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFD 364
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM---PMEPNAVLWGSLLTACASADDGAN 417
E V + ++ ++ L + A + + M PN V S+L+ACA GA
Sbjct: 365 ESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQL--GA- 421
Query: 418 VELAEIAMERLIKLEPFNDGNYV--LMSNIYAAKAQWDDAGKMRRLMKERNIV 468
+ + ++ +LIK + YV + ++YA +A ++ L E+N V
Sbjct: 422 LSFGK-SVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTV 473
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/488 (36%), Positives = 274/488 (56%), Gaps = 22/488 (4%)
Query: 34 LPL-LQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
PL L+ CT K +H+ ++K F++ + T L + S ++ AH VF
Sbjct: 114 FPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSG---SGRLNDAHKVFE 170
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQ 146
+I S + + GY AG I L+ +M+ G+ PDS+ +L AC GDL
Sbjct: 171 EIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDS 230
Query: 147 ----VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
VK + + ++ F T L+ Y G ++ A+ +FD M EK++VTW+ MI
Sbjct: 231 GEWIVKHMEEMEMQKNSFVR-----TTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMI 285
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
G+ +EGI+ F +M ++ ++ ++V LS+CA+LGA +LG+W ++++ +
Sbjct: 286 QGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL 345
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
N + AL DMYAKCG + VFK + EK++ N+ I GLA +G + + +F Q
Sbjct: 346 TNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQT 405
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
+ GI PD T + +L C HAGLI+ G F + Y ++ V+HYGC+VDL RA +
Sbjct: 406 EKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGM 465
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLM 442
LD+AY +I +MPM PNA++WG+LL+ C D +LAE ++ LI LEP+N GNYV +
Sbjct: 466 LDDAYRLICDMPMRPNAIVWGALLSGCRLVKD---TQLAETVLKELIALEPWNAGNYVQL 522
Query: 443 SNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
SNIY+ +WD+A ++R +M + + K PG S IE+ VHEF+ D HP S++IY+ L
Sbjct: 523 SNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKL 582
Query: 503 EYVAISLR 510
E + +R
Sbjct: 583 EDLGNEMR 590
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 214/401 (53%), Gaps = 14/401 (3%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLI-ESLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
KQVH +I + DT L L+ + + Q Y+ L+F+ P+ F +NT+I
Sbjct: 28 HLKQVHVSLIHHHLHH----DTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLI 83
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDF 160
G+ L H + L+ + +GL+ FT+P++LKAC K +HSLVVK F
Sbjct: 84 NGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKC-GF 142
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
N + ++T L++ Y G + A +F+++ E++VVTWTA+ +G+ +RE IDLF+K
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKK 202
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M + GV + +V VLSAC ++G + G+W+ + + + + N + L ++YAKCG
Sbjct: 203 MVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
+E+A VF + EK++ TW+++I G A + +E ++ F QM +KPD +++ L++
Sbjct: 263 MEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSS 322
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
C+ G ++ G E ++ ++ N+ L+D+ + + +EV + M E + V
Sbjct: 323 CASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIV 380
Query: 401 LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVL 441
+ + ++ A +V+L+ + KL DG+ L
Sbjct: 381 IMNAAISGLAK---NGHVKLSFAVFGQTEKLGISPDGSTFL 418
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 242/343 (70%), Gaps = 5/343 (1%)
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD-SGVEV 228
L++ Y G V SA+ LF++M ++NVV+WTAM++G+ + + E ++ F +M + +GV+
Sbjct: 159 LLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQP 218
Query: 229 NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
NELT+ SVL ACA +GA ELG+ V E+ ++ N + AL +MY+KCG I +A +VF
Sbjct: 219 NELTVSSVLPACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVF 278
Query: 289 K-IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
+ I ++++C+WNS+I A+HG EA+ +F++++M+G+KPD +T + V+ AC+H GL+
Sbjct: 279 QGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLV 338
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
+GK F +M ++ ++P ++HYGC+VDLL RA LL E+Y +I +MP+EP+AV+WG+LL
Sbjct: 339 NEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLG 398
Query: 408 ACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
AC+ NVELAE+AM++LI LEP N N V++SNIYA+ +WD ++ +L+KE++
Sbjct: 399 ACSFH---GNVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDH 455
Query: 468 VKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
K+ G S IE++ +H+F+V D HP EE+Y+ L V ++++
Sbjct: 456 KKSAGYSFIELDGTMHKFLVEDKSHPRFEEVYNTLNSVTMTMK 498
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 84/142 (59%), Gaps = 2/142 (1%)
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIK 328
AL YAK G ++ A ++F+ + ++NV +W +++ G A +G EEAV+ F +M + +G++
Sbjct: 158 ALLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQ 217
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
P+++T+ +VL AC+ G +E G+++ R + NV L+++ + + +A++
Sbjct: 218 PNELTVSSVLPACAAVGAMELGRKV-EEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQ 276
Query: 389 VIRNMPMEPNAVLWGSLLTACA 410
V + + + + W S++ A A
Sbjct: 277 VFQGIGRQQDLCSWNSMIMAFA 298
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 182/507 (35%), Positives = 281/507 (55%), Gaps = 47/507 (9%)
Query: 36 LLQKCTHL---VQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ-- 90
LL+ C + + KQ+H ++K ++ T L I + ++ YA LVF++
Sbjct: 138 LLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSL---INMYAQNGELGYAELVFSKSS 194
Query: 91 ---------IINPSTF--------------------AFNTVIRGYAEAGLGHRGIQLYTQ 121
+I T ++N +I GYA++G + + +
Sbjct: 195 LRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQE 254
Query: 122 MIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG 178
M + P+ T +L AC G L V S + + S + + LI Y G
Sbjct: 255 MKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWI-EDHGLGSNLRLVNALIDMYSKCG 313
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
D+ A+ LF+ + EK++++W MI G+ +Y+E + LFRKM+ S VE N++T VS+L
Sbjct: 314 DLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILP 373
Query: 239 ACANLGASELGKWVHEFVNKNCIIL-NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
ACA LGA +LGKW+H +++K + L N L +L DMYAKCG IE A +VF + K++
Sbjct: 374 ACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG 433
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
+WN++I GLA+HG A+++F QM+ G +PDD+T + VL+ACSHAGL+E G++ F +M
Sbjct: 434 SWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSM 493
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
DY + P ++HYGC++DLL RA L DEA +++NM M+P+ +WGSLL AC N
Sbjct: 494 VEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVH---GN 550
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
VEL E A + L +LEP N G YVL+SNIYA +WDD ++R + ++ + K +
Sbjct: 551 VELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKXQDIYKM- 609
Query: 478 INDVVHEFMVGDGRHP-CSEEIYSMLE 503
++++ F G P SE +Y M E
Sbjct: 610 LDEIDQSFGERPGXVPDTSEVLYDMDE 636
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 229/418 (54%), Gaps = 41/418 (9%)
Query: 29 KSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHL 86
++H L LL C KQ+H+QIIK N + L+KLIE ++ ++YA L
Sbjct: 31 QNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFA---LSKLIEFCAISPFGNLSYALL 87
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GD 143
+F I P+ F +NT+IRG + + I Y +M+ G++P+S+T+P LLK+C G
Sbjct: 88 LFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGA 147
Query: 144 LRQVKGVHSLVVK----SKDF--NSVIH------------------------SLTRLITF 173
++ K +H V+K S F S+I+ S T LIT
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y G + A+ LF+++ ++ V+W AMI G+ + + E + F++M+ + V NE T+
Sbjct: 208 YTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
V+VLSACA G+ ELG WV ++ + + N +L AL DMY+KCG +++A +F+ + E
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K++ +WN +IGG + +EA+ +F +MQ S ++P+DVT +++L AC++ G ++ GK I
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV-LWGSLLTACA 410
+ + + N + L+D+ + ++ A +V M+P ++ W ++++ A
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAG--MKPKSLGSWNAMISGLA 443
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/558 (34%), Positives = 298/558 (53%), Gaps = 84/558 (15%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+ LL+KC + Q KQ+H+ IK + + ++ + S + YAH VF+ I +
Sbjct: 11 ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAH-ESGNMNYAHQVFDTIPH 69
Query: 94 PSTFAFNTVI-----------------------------------RGYAEAGLGHRGIQL 118
PS F +NT+I +G+ G +L
Sbjct: 70 PSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKEL 129
Query: 119 YTQMIGNGLDPDSF-------------------------------TYPILLKACGDLRQV 147
+ +G D + F T+ I+L ++Q
Sbjct: 130 LNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQF 189
Query: 148 KGVHSLVV-----KSKDFNSVIHSLTRLIT-----FYCNFGDVKSAQLLFDQMTEKNVVT 197
K L+V K KD H + + G++ AQ +FD M ++VV+
Sbjct: 190 KISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKTRDVVS 249
Query: 198 WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
WTAMI+G+++ ++ + LFR+M+ S V+ +E T+VS+L ACA LGA ELG+WV ++
Sbjct: 250 WTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKTCID 309
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
KN + +G AL DMY KCG + +A +VFK + +K+ TW ++I GLAI+G GEEA+
Sbjct: 310 KNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALA 369
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL 377
MF M + + PD++T I VL AC +++KGK F NM + ++P V HYGC+VDLL
Sbjct: 370 MFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLL 425
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDG 437
L+EA EVI NMP++PN+++WGS L AC NV+LA++A +++++LEP N
Sbjct: 426 GCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHK---NVQLADMAAKQILELEPENGA 482
Query: 438 NYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEE 497
YVL+ NIYAA +W++ ++R+LM ER I K PGCS++E+N V+EF+ GD HP S+E
Sbjct: 483 VYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKE 542
Query: 498 IYSMLEYVAISLREECYA 515
IY+ LE + L + Y+
Sbjct: 543 IYAKLENMMQGLIKAGYS 560
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 242/343 (70%), Gaps = 5/343 (1%)
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD-SGVEV 228
L++ Y G V SA+ LF++M ++NVV+WTAM++G+ + + E ++ F +M + +GV+
Sbjct: 159 LLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQP 218
Query: 229 NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
NELT+ SVL ACA +GA ELG+ V E+ ++ N + AL +MY+KCG I +A +VF
Sbjct: 219 NELTVSSVLPACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVF 278
Query: 289 K-IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
+ I ++++C+WNS+I A+HG EA+ +F++++M+G+KPD +T + V+ AC+H GL+
Sbjct: 279 QGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLV 338
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
+GK F +M ++ ++P ++HYGC+VDLL RA LL E+Y +I +MP+EP+AV+WG+LL
Sbjct: 339 NEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLG 398
Query: 408 ACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
AC+ NVELAE+AM++LI LEP N N V++SNIYA+ +WD ++ +L+KE++
Sbjct: 399 ACSFH---GNVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDH 455
Query: 468 VKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
K+ G S IE++ +H+F+V D HP EE+Y+ L V ++++
Sbjct: 456 KKSAGYSFIELDGTMHKFLVEDKSHPRFEEVYNTLNSVTMTMK 498
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 84/142 (59%), Gaps = 2/142 (1%)
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIK 328
AL YAK G ++ A ++F+ + ++NV +W +++ G A +G EEAV+ F +M + +G++
Sbjct: 158 ALLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQ 217
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
P+++T+ +VL AC+ G +E G+++ R + NV L+++ + + +A++
Sbjct: 218 PNELTVSSVLPACAAVGAMELGRKV-EEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQ 276
Query: 389 VIRNMPMEPNAVLWGSLLTACA 410
V + + + + W S++ A A
Sbjct: 277 VFQGIGRQQDLCSWNSMIMAFA 298
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 173/465 (37%), Positives = 282/465 (60%), Gaps = 17/465 (3%)
Query: 64 SDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
SD A LI + +A A VF++I + + ++N++I GYA+AG ++++ +M
Sbjct: 155 SDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREM 214
Query: 123 -IGNGLDPDSFTYPILLKACGDL------RQVKGVHSLVVKSKDFNSVIHSLTRLITFYC 175
+G +PD + LL ACG+L R V+G +V + NS I S LI+ Y
Sbjct: 215 GRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGF--VVERGMTLNSYIGS--ALISMYA 270
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
G+++SA+ +FD M ++V+TW A+I+G+ + E I LF M++ V N++TL +
Sbjct: 271 KCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTA 330
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
VLSACA +GA +LGK + E+ ++ + + AL DMYAK G ++ A RVFK + +KN
Sbjct: 331 VLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKN 390
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQM--QMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
+WN++I LA HG +EA+ +F M + G +P+D+T + +L+AC HAGL+++G +
Sbjct: 391 EASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRL 450
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F M + + P ++HY C+VDLL RA L EA+++IR MP +P+ V G+LL AC S
Sbjct: 451 FDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKK 510
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
NV++ E M +++++P N GNY++ S IYA W+D+ +MR LM+++ I K PGC
Sbjct: 511 ---NVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGC 567
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
S IE+ + +HEF GDG S ++ ++++ + L+ E Y ++
Sbjct: 568 SWIEVENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKREGYVPKV 612
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 217/383 (56%), Gaps = 16/383 (4%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII-NP 94
L ++C+ +QVH Q++ N +I T L+ ++ Y+ L+F+ I +P
Sbjct: 30 LAKQCSSTKTLQQVHTQMVV----NSSIH-TPNNHLLSKAIHLKNFPYSSLLFSHIAPHP 84
Query: 95 STFAFNTVIRGYAEAGLGHR-GIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GV 150
+ +AFN +IR + + L+ +M+ L PD+FT+P +C +L +
Sbjct: 85 NDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAA 144
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
HSL+ K +S H+ LIT Y G V SA+ +FD++ ++ V+W +MI G+ K
Sbjct: 145 HSLLFKLA-LHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGC 203
Query: 211 YREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
RE +++FR+M R G E +E++LVS+L AC LG ELG+WV FV + + LN +G+
Sbjct: 204 AREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGS 263
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL MYAKCG +E A R+F + ++V TWN++I G A +G +EA+ +F M+ +
Sbjct: 264 ALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTA 323
Query: 330 DDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
+ +TL AVL+AC+ G ++ GK+I Y +R ++ + V L+D+ ++ LD A
Sbjct: 324 NKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVA--TALIDMYAKSGSLDNAQR 381
Query: 389 VIRNMPMEPNAVLWGSLLTACAS 411
V ++MP + N W ++++A A+
Sbjct: 382 VFKDMP-QKNEASWNAMISALAA 403
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 175/488 (35%), Positives = 278/488 (56%), Gaps = 22/488 (4%)
Query: 34 LPL-LQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
PL L+ CT K +H+ ++K F++ + T L + S ++ AH +F+
Sbjct: 114 FPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSG---SGRLNDAHKLFD 170
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQ 146
+I + S + + GY +G I L+ +M+ G+ PDS+ +L AC GDL
Sbjct: 171 EIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDS 230
Query: 147 ----VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
VK + + ++ F T L+ Y G ++ A+ +FD M EK++VTW+ MI
Sbjct: 231 GEWIVKYMEEMEMQKNSFVR-----TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMI 285
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
G+ +EGI+LF +M ++ ++ ++V LS+CA+LGA +LG+W ++++ +
Sbjct: 286 QGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL 345
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
N + AL DMYAKCG + VFK + EK++ N+ I GLA +G + + +F Q
Sbjct: 346 TNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQT 405
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
+ GI PD T + +L C HAGLI+ G F + Y ++ V+HYGC+VDL RA +
Sbjct: 406 EKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGM 465
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLM 442
LD+AY +I +MPM PNA++WG+LL+ C D +LAE ++ LI LEP+N GNYV +
Sbjct: 466 LDDAYRLICDMPMRPNAIVWGALLSGCRLVKD---TQLAETVLKELIALEPWNAGNYVQL 522
Query: 443 SNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
SNIY+ +WD+A ++R +M ++ + K PG S IE+ VHEF+ D HP S++IY+ L
Sbjct: 523 SNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKL 582
Query: 503 EYVAISLR 510
E + +R
Sbjct: 583 EDLGNEMR 590
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 218/401 (54%), Gaps = 14/401 (3%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLI-ESLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
KQ+H +I + DT L L+ + + Q Y++L+F+ P+ F +N++I
Sbjct: 28 HLKQIHVSLINHHLHH----DTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLI 83
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDF 160
G+ L H + L+ + +GL FT+P++LKAC K +HSLVVK F
Sbjct: 84 NGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKC-GF 142
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
N + ++T L++ Y G + A LFD++ +++VVTWTA+ +G+ +RE IDLF+K
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M + GV+ + +V VLSAC ++G + G+W+ +++ + + N + L ++YAKCG
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
+E+A VF ++EK++ TW+++I G A + +E +++F QM +KPD +++ L++
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
C+ G ++ G E ++ ++ N+ L+D+ + + +EV + M E + V
Sbjct: 323 CASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIV 380
Query: 401 LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVL 441
+ + ++ A +V+L+ + KL DG+ L
Sbjct: 381 IMNAAISGLAK---NGHVKLSFAVFGQTEKLGISPDGSTFL 418
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 176/472 (37%), Positives = 268/472 (56%), Gaps = 10/472 (2%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
H L K + K H Q+I+ + T++ L + I A VF++
Sbjct: 2 HSLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYS---KCGLIRRACKVFDE 58
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQV 147
I S ++N +I + G + I ++ +M G FT ++ AC GD+
Sbjct: 59 IPERSMVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFC 118
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ +H+ +K+ ++ + T LI Y G ++ A +F+ M E+N VTW++++ G V+
Sbjct: 119 RQLHAFAIKAV-VDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQ 177
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
+ Y EG+ LF + ++ G+E N+ + SV+ ACA L A G+ VH V + N+ +
Sbjct: 178 NELYEEGLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFV 237
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
+AL DMYAKCG IEEA +F + +KNV WN+II G A H C E + +F +MQ +G+
Sbjct: 238 ASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGM 297
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
+PD+VT +AVL+AC H GL++KG+ F M R++ V PNV HY C+VD+L R L+ EA+
Sbjct: 298 QPDEVTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAH 357
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
E++ MP A +WGSLL +C N+ELAEIA + L ++EP GNYVL++N YA
Sbjct: 358 ELMTKMPFAATASMWGSLLASCRIH---GNLELAEIAAKNLFEMEPDRGGNYVLLANTYA 414
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
A +W++A K R+ +K I+K G S IEI D VH FM G+ HP +IY
Sbjct: 415 ASKKWEEAAKARKSLKGSEILKERGKSWIEIKDKVHTFMAGERTHPRITDIY 466
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 182/472 (38%), Positives = 276/472 (58%), Gaps = 19/472 (4%)
Query: 52 QIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAG 110
++ K + + ISD ++ + I + I A L+F+++ +N +I G A+
Sbjct: 545 EVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQR 604
Query: 111 LGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSL-----VVKSKDFNS 162
G + L+ QM G PD+ T+ +L A D L VK VHS +V + N+
Sbjct: 605 CGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNA 664
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
++H+ Y G+VK A+ +FD M E+NV TWT MI G + + F +M
Sbjct: 665 LVHT-------YSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQML 717
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
G+ + T VS+LSACA+ GA E K VH ++ + ++G AL MYAKCG I+
Sbjct: 718 REGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSID 777
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+A VF ++E++V +W +IGGLA HG G EA+ F +M+ G KP+ + +AVLTACS
Sbjct: 778 DARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACS 837
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
HAGL+++G+ F +M +DY +EP ++HY C+VDLL RA LL+EA I NMP+EP+ W
Sbjct: 838 HAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPW 897
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL AC + N+E+AE A + +KL+P + YVL+SNIYAA +W+ +R +M
Sbjct: 898 GALLGACVTY---GNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMM 954
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ + I K PG S IE+++ +H F+VGD HP S+EIY+ L + L+ + Y
Sbjct: 955 QRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGY 1006
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 182/325 (56%), Gaps = 12/325 (3%)
Query: 27 ATKSHHHLPLLQKC---THLVQFKQVHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIA 82
A S ++ +LQ+C ++ KQVH IIK+ + N +++ KL+ + ++
Sbjct: 115 AIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVAN----KLLRVYIRCGRLQ 170
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG 142
A VF++++ + + + T+I GYAE G +++Y +M P+ TY +LKAC
Sbjct: 171 CARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230
Query: 143 ---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
+L+ K +H+ +++S F S + T L+ Y G ++ AQL+FD+M E+NV++WT
Sbjct: 231 CPVNLKWGKKIHAHIIQS-GFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWT 289
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
MI G +E LF +M+ G N T VS+L+A A+ GA E K VH
Sbjct: 290 VMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNA 349
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ L+ ++G AL MYAK G I++A VF + E+++ +W +IGGLA HG G+EA +F
Sbjct: 350 GLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLF 409
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHA 344
QMQ +G P+ T +++L A + A
Sbjct: 410 LQMQRNGCLPNLTTYLSILNASAIA 434
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 212/467 (45%), Gaps = 61/467 (13%)
Query: 47 KQVHAQIIKA--SFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
K+VH+ + A + D R + L+ S I A +VF+ + F++ +I
Sbjct: 340 KEVHSHAVNAGLALDLRVGN-----ALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIG 394
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG-----DLRQVKGVHSLVVKSKD 159
G A+ G G L+ QM NG P+ TY +L A L VK VH +
Sbjct: 395 GLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHA-EEAG 453
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
F S + LI Y G + A+L+FD M +++V++W AM+ G + E +F
Sbjct: 454 FISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFL 513
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
+M+ G+ + T +S+L+ + A E VH+ + +I + ++G+A MY +CG
Sbjct: 514 QMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCG 573
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
I++A +F + ++V TWN++IGG A CG EA+ +F QMQ G PD T I +L+
Sbjct: 574 SIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILS 633
Query: 340 A----------------CSHAGLIE------------------KGKEIFYNMRRDYKVEP 365
A + AGL++ K++F +M VE
Sbjct: 634 ANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDM-----VER 688
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPME---PNAVLWGSLLTACASADDGANVELAE 422
NV + ++ L + +A+ M E P+A + S+L+ACAS GA + E
Sbjct: 689 NVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACAST--GALEWVKE 746
Query: 423 IAMERLIK--LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
+ + + GN ++ ++YA DDA + M ER++
Sbjct: 747 VHNHAVSAGLVSDLRVGNALV--HMYAKCGSIDDARSVFDDMVERDV 791
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 133/266 (50%), Gaps = 14/266 (5%)
Query: 195 VVTWTAMINGHVKQKN----YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
+V A ++G +Q + ++ + + + G+ ++ + V++L C L K
Sbjct: 79 LVCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAK 138
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
VH + K+ + N + L +Y +CG ++ A +VF +L+KN+ W ++IGG A +G
Sbjct: 139 QVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYG 198
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
E+A++++ +M+ +P+++T +++L AC ++ GK+I ++ + + +V+
Sbjct: 199 HAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQS-GFQSDVRVE 257
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
LV++ + +++A ++I + +E N + W ++ A G + M+R
Sbjct: 258 TALVNMYVKCGSIEDA-QLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQR--- 313
Query: 431 LEPFNDGNY----VLMSNIYAAKAQW 452
E F +Y +L +N A +W
Sbjct: 314 -EGFIPNSYTYVSILNANASAGALEW 338
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 185/510 (36%), Positives = 282/510 (55%), Gaps = 47/510 (9%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPST-FAFNT 101
QFK+ H Q+I + T L +I +L S I YA L+ + P T F FNT
Sbjct: 3 QFKEAHTQLI---INGLTHPPPSLRPIISFSALDPSGDIDYALLLLLRTSTPPTVFLFNT 59
Query: 102 VIRGYAEA---GLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVV 155
IRG++ A G + L+ +M L P++FT+ L + C + + H +V+
Sbjct: 60 TIRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVI 119
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ-------------------------- 189
K+ F + +I FY G + A+ +FD+
Sbjct: 120 KNS-FEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNGNILEAL 178
Query: 190 -----MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
MTE+N ++W MI+G+ + +E + LFR+M+ E N LVSVLSAC+ LG
Sbjct: 179 SLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLG 238
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
A + G WVH ++ K C+ ++ L AAL DMYAKCG I+ A++ F +++V + + I
Sbjct: 239 ALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAIS 298
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVE 364
GLA++GC EEA+++F QM+ GI PD V+ IAVL ACSHAG +EKG F +M + +
Sbjct: 299 GLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIR 358
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIA 424
P + HY C+VDLL RA LL+EA + + +MP++P+ V+WG+LL AC N E+ +
Sbjct: 359 PELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVY---GNAEMGQRV 415
Query: 425 MERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHE 484
L++ + +DG Y+L+SNIYA + +DA ++R+ M+ R + + PGCS+IE+ VHE
Sbjct: 416 GSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEVAGFVHE 475
Query: 485 FMVGDGRHPCSEEIYSMLEYVAISLREECY 514
F GD H +EEIY M E + +++ Y
Sbjct: 476 FFSGDRSHEKTEEIYLMWEEIVKEIKKFGY 505
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 288/492 (58%), Gaps = 17/492 (3%)
Query: 36 LLQKC---THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L +C T + + ++VHA +IK ++ T+L L + A V +++
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYN---KCRCLGDARRVLDEMP 539
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKG 149
+ ++ +I GY++ G + L+ +M+ +G P+ FT+ +L +C + +
Sbjct: 540 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 599
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+HSLV+K+ F S I + L+ Y G + A+ +FD + E++VV+ TA+I+G+ +
Sbjct: 600 IHSLVIKTS-FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLG 658
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E +DLFR+++ G+ N +T SVL+A + L A + G+ VH V + + L
Sbjct: 659 LDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN 718
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIK 328
+L DMY+KCG + + R+F + E+ V +WN+++ G + HG G EAV++F M + + +K
Sbjct: 719 SLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK 778
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNM--RRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
PD VT +AVL+ CSH G+ ++G EIFY M ++D EP ++HYGC+VDL RA ++EA
Sbjct: 779 PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKD-GFEPEIEHYGCVVDLFGRAGRVEEA 837
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
+E I+ MP EP A +WGSLL AC NV + E RL+++E N GNYV++SN+Y
Sbjct: 838 FEFIKKMPFEPTAAIWGSLLGACRVHQ---NVHIGEFVARRLLEIESENAGNYVILSNLY 894
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
A+ +WDD +R LMKE+ ++K PG S IE++ +H F D HP EE+++ + ++
Sbjct: 895 ASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELS 954
Query: 507 ISLREECYAARM 518
I ++E Y +
Sbjct: 955 IKIKEAGYVPEL 966
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 164/306 (53%), Gaps = 7/306 (2%)
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
GL+ + Y +L C +R+ + VH+ ++K+ + ++ TRLI Y +
Sbjct: 471 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTC-YEPPVYLRTRLIVLYNKCRCLG 529
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
A+ + D+M E+NVV+WTAMI+G+ ++ E + LF +M SG NE T +VL++C
Sbjct: 530 DARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCT 589
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
+ +LG+ +H V K + +G++L DMYAK G I EA RVF + E++V + +
Sbjct: 590 SSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTA 649
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
II G A G EEA+ +F ++Q G++ + VT +VLTA S ++ G+++ ++ R
Sbjct: 650 IISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRA- 708
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN-VEL 420
K+ V L+D+ + L + + +MP E + W ++L + G VEL
Sbjct: 709 KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVGYSKHGLGREAVEL 767
Query: 421 AEIAME 426
++ E
Sbjct: 768 FKLMKE 773
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
+M G+EV SVL+ C + A G+ VH + K C L L +Y KC
Sbjct: 467 EMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCR 526
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
+ +A RV + E+NV +W ++I G + G EA+ +F +M MSG P++ T VLT
Sbjct: 527 CLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLT 586
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
+C+ + + G++I +++ E ++ L+D+ +A + EA V +P E +
Sbjct: 587 SCTSSSGFQLGRQI-HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP-ERDV 644
Query: 400 VLWGSLLTACASADDG-ANVELAEIAMERLIKLEPFNDG---NYVLMSNIYAA 448
V +C + G A + L E A++ +L+ +G NYV +++ A
Sbjct: 645 V-------SCTAIISGYAQLGLDEEALDLFRRLQ--REGMRSNYVTYASVLTA 688
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 174/513 (33%), Positives = 291/513 (56%), Gaps = 30/513 (5%)
Query: 27 ATKSHHH------------LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIES 74
+ K HHH + L++ CTH Q Q+HA II S +I D ++ +
Sbjct: 12 SLKYHHHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTS----SIQDPIVSLRFLT 67
Query: 75 LVNSS---QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS 131
S+ + Y+ +F+ + NP +N ++R Y+ + G+ +Y M G+ D
Sbjct: 68 RTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADP 127
Query: 132 FTYPILLKACGDLRQVK---GVHS-LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
+ +K+C L + +H+ + + +S++ LT ++ Y + G + A LF
Sbjct: 128 LSSSFAVKSCIKLLSLLFGIQIHARIFINGHQADSLL--LTSMMDLYSHCGKPEEACKLF 185
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG--VEVNELTLVSVLSACANLGA 245
D++ +K+VV W +I+ + K R+ + LF M+ + +++T + +L ACA+L A
Sbjct: 186 DEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNA 245
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
E G+ +H ++ ++ L +L MY++CG +++A VF + EKNV +W+++I G
Sbjct: 246 LEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISG 305
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
L+++G G EA++ FW+MQ +G++P D T AVL+ACSH GL+++G F MR+++ + P
Sbjct: 306 LSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAP 365
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAM 425
NV HYGC+VDLL RA +LD+AYE+I +M + P+A +W +LL AC G L E +
Sbjct: 366 NVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHG---NLGERIV 422
Query: 426 ERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEF 485
E LI+L+ G+YVL+ NIY++ WD ++R+LMKE+ I P C+ IE+N VVH+F
Sbjct: 423 EHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQF 482
Query: 486 MVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
V D HP ++IY L+ + L+ Y A M
Sbjct: 483 AVDDISHPMKDKIYKQLDEINKQLKIAGYEAEM 515
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 182/528 (34%), Positives = 289/528 (54%), Gaps = 47/528 (8%)
Query: 23 NSNTATKSHHHLP-LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVN- 77
S TA H P LL+ C L ++ A +++ D SD + ++
Sbjct: 117 RSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLD----SDVFVVNAATHFLSI 172
Query: 78 SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG--LDPDSFTYP 135
+ A +F++ ++NT+I GY G ++L+ +M+ + PD T
Sbjct: 173 RGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMI 232
Query: 136 ILLKACGDLRQVK------------GVH-----------------SLVVKSKDFNSVIH- 165
+ CG +R ++ GV SL + F + H
Sbjct: 233 AAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHR 292
Query: 166 ---SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
S T +I + FG + A+ +FD+M E++V W A++ G+V+ K +E + LF +M+
Sbjct: 293 TVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQ 352
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
++ V +E+T+V++L+AC+ LGA E+G WVH ++ K+ ++ + LG +L DMYAKCG IE
Sbjct: 353 EASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIE 412
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+A+ +FK + EKN TW ++I GLA HG EA++ F M G KPD++T I VL+AC
Sbjct: 413 KAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACC 472
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
HAGL+++G+E F M Y +E +KHY C++DLL RA LDEA +++ MPMEP+AV+W
Sbjct: 473 HAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVW 532
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G++ AC N+ L E A +L++++P + G YVL++N+YA A K+R +M
Sbjct: 533 GAIFFACRMQ---GNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAMM 589
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+ + K PGCS IE+N VVHEF+V D H S IY L + + ++
Sbjct: 590 RHLGVEKVPGCSCIELNGVVHEFIVKDKSHMDSHAIYDCLHEITLQIK 637
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 187/367 (50%), Gaps = 58/367 (15%)
Query: 98 AFNTVIRGYAEA--------GLGHRGIQLYTQMIGNGL-DPDSFTYPILLKACGDLRQ-- 146
A+N IR + + G+ R + LY ++ +G PD T+P LLKAC LR+
Sbjct: 83 AYNAAIRALSLSDDGDRHGHGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWG 142
Query: 147 -----VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
+ V L + S F V+++ T ++ G ++ A+ LFD+ +++V+W +
Sbjct: 143 YGDAALAHVLRLGLDSDVF--VVNAATHFLSIR---GPMEDARRLFDRSPVRDLVSWNTL 197
Query: 202 INGHVKQKNYREGIDLFRKM--RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
I G+V++ N E ++LF +M D+ V +E+T+++ +S C + ELG+ +H FV+ +
Sbjct: 198 IGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSD 257
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG--------- 310
+ +L AL DMY KCG +E A VF+ + + V +W ++I G A G
Sbjct: 258 GVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVF 317
Query: 311 --------------------CGE--EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
C + EA+ +F +MQ + + PD++T++ +LTACS G +E
Sbjct: 318 DEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALE 377
Query: 349 KGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
G + + + +++ +V L+D+ + +++A + + +P E NA+ W +++
Sbjct: 378 MGMWVHRYIEK-HRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIP-EKNALTWTAMI-- 433
Query: 409 CASADDG 415
C A+ G
Sbjct: 434 CGLANHG 440
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 293/497 (58%), Gaps = 22/497 (4%)
Query: 37 LQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
++ C+ L+ +Q H Q + F+ + L ++ ++ A +F++I +
Sbjct: 159 IKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSAL---VDMYSKCGELRDARTLFDEISH 215
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMI----GNGLDPDSFTYPI----LLKACGDLR 145
+ ++ ++I GY + HR + L+ + + G+ D + PI +L AC +
Sbjct: 216 RNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVS 275
Query: 146 Q---VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
+ +GVH ++K + F + L+ Y G++ ++ +FD M E++V++W ++I
Sbjct: 276 EKSITEGVHGFLIK-RGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSII 334
Query: 203 NGHVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
+ + E +++F +M +D + N +TL +VL ACA+ G+ LGK +H+ V K +
Sbjct: 335 AVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGL 394
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
N +G ++ DMY KCG +E A + F + EKNV +W++++ G +HG +EA+++F++
Sbjct: 395 ESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYE 454
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
M M+G+KP+ +T ++VL ACSHAGL+E+G F M ++ VEP V+HYGC+VDLL RA
Sbjct: 455 MNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAG 514
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVL 441
L EA+++I+ M + P+ V+WG+LL AC NV+L EI+ +L +L+P N G YVL
Sbjct: 515 YLKEAFDLIKGMKLRPDFVVWGALLGACRMHK---NVDLGEISARKLFELDPKNCGYYVL 571
Query: 442 MSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSM 501
+SNIYA +W+D +MR LMK +VK PG S+++I VH F+VGD HP E+IY
Sbjct: 572 LSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEY 631
Query: 502 LEYVAISLREECYAARM 518
LE +++ L+E Y M
Sbjct: 632 LEKLSMKLQEVGYVPDM 648
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 177/335 (52%), Gaps = 16/335 (4%)
Query: 87 VFNQIINPS-TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG--- 142
+FN+ ++ + F++N+VI A +G ++ ++ M L P+ T+P +K+C
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 143 DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
DL + H + F + + L+ Y G+++ A+ LFD+++ +N+V+WT+MI
Sbjct: 167 DLHSGRQAHQQALIF-GFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 225
Query: 203 NGHVKQKNYREGIDLFRK--MRDSGVE------VNELTLVSVLSACANLGASELGKWVHE 254
G+V+ + + LF++ + +SG E V+ + +VSVLSAC+ + + + VH
Sbjct: 226 TGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHG 285
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
F+ K + + L D YAKCG + + RVF + E++V +WNSII A +G E
Sbjct: 286 FLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTE 345
Query: 315 AVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
++++F +M G I + VTL AVL AC+H+G GK I ++ +E NV +
Sbjct: 346 SMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCI-HDQVIKMGLESNVFVGTSI 404
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+D+ C+ ++ A + M E N W +++
Sbjct: 405 IDMYCKCGKVEMARKAFDRM-REKNVKSWSAMVAG 438
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
K V + NV +WNS+I LA G EA++ F M+ +KP+ T + +CS +
Sbjct: 110 KYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLH 169
Query: 349 KGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
G++ + + EP++ LVD+ + L +A + + N V W S++T
Sbjct: 170 SGRQA-HQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEIS-HRNIVSWTSMITG 227
Query: 409 CASADDG 415
DD
Sbjct: 228 YVQNDDA 234
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 295/495 (59%), Gaps = 27/495 (5%)
Query: 21 HKNSNTATKSHHH--LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNS 78
H SN+ + +HH L L CT + Q KQ+HAQ I+ + + + ++++ +
Sbjct: 15 HAISNSDSFTHHRRLLLFLNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILH-FSSL 73
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEA-GLGHRGIQLYTQMIGNG-LDPDSFTYPI 136
+ YA VF+QI NP++F +N +IR A + I LY +M+ G + D T+P
Sbjct: 74 HDLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPF 133
Query: 137 LLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
+LKAC L + + +H+ ++K F+S ++ L+ FY + A+ +FD+M+E+
Sbjct: 134 VLKACAYLFALSEGEQIHAQILK-LGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSER 192
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
++V+W +I+ V+ + ++LF +M+ E + T+ S+ +ACA +G+ LG
Sbjct: 193 SLVSWNVVIDAFVRFGEFDAALNLFGEMQKF-FEPDGYTIQSIANACAGMGSLSLG---- 247
Query: 254 EFVNKNCIILNDKL-GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG 312
I+ND L +L DMY KCG +E AL++F + +++V +WNS+I G + HG
Sbjct: 248 --------IVNDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEV 299
Query: 313 EEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
A++ F M + + P+ +T + VL+AC+H GL+ +G+ F M +YK++P ++HYG
Sbjct: 300 AAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYG 359
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
CLVDLL RA L+DEA +V+ NMPM P+ V+W SLL AC + G VEL+E R+++
Sbjct: 360 CLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAG--VELSEEMARRVLEA 417
Query: 432 E-PFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
E G YVL+S +YA+ ++W+D G +R+LM ++ +VK PGCS IEI+ V HEF GD
Sbjct: 418 EGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDT 477
Query: 491 RHPCSEEIYSMLEYV 505
HP +EEIYS L+ +
Sbjct: 478 SHPQTEEIYSALDVI 492
>gi|356574307|ref|XP_003555290.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g43790-like [Glycine max]
Length = 516
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 178/490 (36%), Positives = 282/490 (57%), Gaps = 63/490 (12%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA--YAHLVFNQIINP 94
LQKC +L KQVHAQ++ +T + L L SS+ A YA +FN I +P
Sbjct: 10 LQKCHNLNTLKQVHAQMLTTGLSLQTYFLSHL------LNTSSKFASTYALTIFNHIPSP 63
Query: 95 STFAFNTVIRGYAE-AGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKACGD---LRQVKG 149
+ F +NT+I + H + LY ++ N L P+SFT+P L KAC L+
Sbjct: 64 TLFLYNTLISSLTHHSDQIHLALSLYNHILTHNTLQPNSFTFPSLFKACASHPWLQHGPP 123
Query: 150 VHSLVVK--SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+H+ V+K ++ + + L+ FY +G + ++ LF+Q++E ++ TW M+ +K
Sbjct: 124 LHAHVLKFLQPPYDPFVQN--SLLNFYAKYGKLXVSRYLFNQISEPDLATWNTMLLSQIK 181
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
NE+T V+++SAC+NLGA G
Sbjct: 182 P--------------------NEVTPVALISACSNLGALSQG------------------ 203
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
DMY+KCGY+ A ++F ++ +++ +N++IGG A+HG G +A++M+ +M++ G+
Sbjct: 204 -----DMYSKCGYLNLACQLFDVLSDRDTFCYNAMIGGFAVHGHGNQALEMYRKMKLEGL 258
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
PD T++ + ACSH GL+E+G EIF +M+ + +EP ++HY CL+DLL RA L +A
Sbjct: 259 VPDGATIVVTMFACSHGGLVEEGLEIFESMKGIHGMEPKLEHYRCLIDLLGRAGRLKDAE 318
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
E + +MPM+PNA+LW SLL A A N+E+ E A++ LI+LEP GNYVL+SN+YA
Sbjct: 319 ERLHDMPMKPNAILWRSLLGA---AKLHGNLEMGEAALKHLIELEPETRGNYVLLSNMYA 375
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
+ A+W+D ++R LMK+R + K PG S++EIN +HEF+ GD HP S+EI+ + +
Sbjct: 376 SIARWNDVKRVRMLMKDRGVDKLPGFSLVEINGAMHEFLTGDKAHPFSKEIHLKIGEINR 435
Query: 508 SLREECYAAR 517
L+E + R
Sbjct: 436 RLQEYGHKPR 445
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 169/462 (36%), Positives = 274/462 (59%), Gaps = 15/462 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
+ VH+ ++K ++ DT + LI++ + + A VF+++ ++NT +
Sbjct: 25 RAVHSHVVKLG----SVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAA 80
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIH 165
G +L+ +M + D+ ++ +L +V+ L + + N V
Sbjct: 81 MVREGELAGVRKLFDEMP----EKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVV-- 134
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
S + +++ YC GD++ A+++FD+M KN+VTWT M++ ++ E LF +M+++
Sbjct: 135 SWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEAS 194
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
VE++ +VS+L+ACA G+ LGK +H +V K + + + AL DM+ KCG + A
Sbjct: 195 VELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRAD 254
Query: 286 RVFKI-VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
VF ++K+ +WNSIIGG A+HG G++A+++F QM+ G PD VT+I VL+AC+H
Sbjct: 255 YVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHM 314
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
G +++G+ F NM RDY + P ++HYGC++DLL R L+ EA ++I++MP EPN V+WGS
Sbjct: 315 GFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGS 374
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL+AC NVE AEIA+ L KL+P N GNY ++SNIYA QW D K R MK
Sbjct: 375 LLSACRLHK---NVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKG 431
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
K G S +E+N+ HEF VGD +H S++I M++ ++
Sbjct: 432 TGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLS 473
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 177/491 (36%), Positives = 291/491 (59%), Gaps = 34/491 (6%)
Query: 26 TATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAH 85
TA ++ + +L KC L + +Q+HAQ+IK + N + ++L S + YA
Sbjct: 2 TAISTNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYAS 61
Query: 86 LVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG--NGLDPDSFTYPILLKACGD 143
VF++I +P++F F +I+G+++ + LY +M+ N F+ P +LKACG
Sbjct: 62 SVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGK 121
Query: 144 L---RQVKGVHSLVVKSKD-FNSVI-HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
L + + VH V+K+ F+ + +S+ R+ Y +FG+++ A+ +FD+M ++VV+W
Sbjct: 122 LLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRM---YIDFGEIELARRVFDRMPNRDVVSW 178
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDS-------------------GVEVNELTLVSVLSA 239
+MI G++K +LF +M + G+ + +VSVLSA
Sbjct: 179 NSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKEMLSLGLRPDGPAIVSVLSA 238
Query: 240 CANLGASELGKWVHEFVNKNCIILNDK-LGAALTDMYAKCGYIEEALRVFK-IVLEKNVC 297
A+LG E GKW+H +V+ N I L+ +G+AL DMY+KCGYIE A VF+ I +N+
Sbjct: 239 IADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIG 298
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
WNS+I GLAIHG EA+ +F +M+ I+P+++T + +L+ CSH GL+E+G+ F +M
Sbjct: 299 DWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESM 358
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
YK+ P ++HYGC++DL RA L++A VI+NMP E + + W ++L+A +
Sbjct: 359 HEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKH---GH 415
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
+E+ + A R I+L P + +YVL+SNIYA +WDD K+R +M++R + K GCS +
Sbjct: 416 IEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSML 475
Query: 478 INDVVHEFMVG 488
+N VHEF++G
Sbjct: 476 VNGKVHEFLLG 486
>gi|224139652|ref|XP_002323212.1| predicted protein [Populus trichocarpa]
gi|222867842|gb|EEF04973.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 288/483 (59%), Gaps = 12/483 (2%)
Query: 28 TKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNR-TISDTQLAKLIESLVNSSQIAYAHL 86
+K++ L +LQ C +L + K++ A +I N IS++ L S+ S + YA
Sbjct: 7 SKANAILTVLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILNFCAVSI--SGSLPYAQH 64
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD-PDSFTYPILLKACGDLR 145
+F I+NP T A+N++IRG+A++ + I Y +M+ + + PD+FT+ LKAC ++
Sbjct: 65 LFRHILNPQTQAWNSIIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIK 124
Query: 146 QVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
+K VH ++++ V+ T L+ Y G V+ A+++FD M E+++V W AMI
Sbjct: 125 ALKKCEEVHGSIIRTGYERDVV-VCTGLVRCYGRNGCVEIARMVFDNMPERDLVAWNAMI 183
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
+ + + ++E + ++ MR+ V V+ TLV +LS+C+++GA +G +H ++ ++
Sbjct: 184 SCYSQAGYHQEALRVYDYMRNENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLL 243
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
N +G AL DMYAKCG ++ AL VF + ++ TWNS+I G +HG G+EA+ F QM
Sbjct: 244 RNVFVGNALIDMYAKCGSLDGALEVFN-GMPRDAFTWNSMIVGFGVHGFGDEAIYFFNQM 302
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
+G++P+ + + +L CSH GL+E+G E F+ M + V+P +KHYGC+VD+ RA
Sbjct: 303 LEAGVRPNSIAFLGLLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCIVDMYGRAGK 362
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLM 442
L++A E+I + P + + VLW LL+ S+ NV + EIAM L +L N G+ VL+
Sbjct: 363 LEKALEIIGDSPWQDDPVLWRILLS---SSKIHKNVVIGEIAMRNLSQLGAVNAGDCVLL 419
Query: 443 SNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
+ IYA +MR+L+K++ I PG S IE++D VH F+V D HP SE IY L
Sbjct: 420 ATIYAGANDEQGVARMRKLIKKQGIKTTPGWSWIEVSDQVHRFVVDDKSHPDSEMIYQKL 479
Query: 503 EYV 505
E V
Sbjct: 480 EEV 482
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 275/466 (59%), Gaps = 15/466 (3%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
+ + VH+ ++K ++ DT + LI++ + + A VF+++ ++NT
Sbjct: 144 VAPVRAVHSHVVKLG----SVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNT 199
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFN 161
+ G +L+ +M + D+ ++ +L +V+ L + + N
Sbjct: 200 AMAAMVREGELAGVRKLFDEMP----EKDTVSWNTILDGYTKAGEVEAAFELFQRMPERN 255
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
V S + +++ YC GD++ A+++FD+M KN+VTWT M++ ++ E LF +M
Sbjct: 256 VV--SWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQM 313
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
+++ VE++ +VS+L+ACA G+ LGK +H +V K + + + AL DM+ KCG +
Sbjct: 314 KEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCV 373
Query: 282 EEALRVFKI-VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
A VF ++K+ +WNSIIGG A+HG G++A+++F QM+ G PD VT+I VL+A
Sbjct: 374 NRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSA 433
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
C+H G +++G+ F NM RDY + P ++HYGC++DLL R L+ EA ++I++MP EPN V
Sbjct: 434 CTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEV 493
Query: 401 LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRR 460
+WGSLL+AC NVE AEIA+ L KL+P N GNY ++SNIYA QW D K R
Sbjct: 494 IWGSLLSACRLHK---NVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARM 550
Query: 461 LMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
MK K G S +E+N+ HEF VGD +H S++I M++ ++
Sbjct: 551 QMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLS 596
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 179/482 (37%), Positives = 279/482 (57%), Gaps = 49/482 (10%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LL Q +++HA ++ + + + SL +++AYA+ +F Q N
Sbjct: 13 LRLLHGRETRTQLREIHAHFLRHGLNQLNQILSHFVSICGSL---NKMAYANRIFKQTQN 69
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGV 150
P+ FN +I+GY+ G +L++ M G+ PD +T LLKAC G L+ K +
Sbjct: 70 PTIILFNAMIKGYSLNGPFEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLGKCM 129
Query: 151 HS--LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
H LVV + F+++ +I Y + G ++ A+ +FD+M +++V+ W MI+G K+
Sbjct: 130 HKEVLVVGFEGFSAI---RIGVIELYSSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFCKR 186
Query: 209 KNYREGIDLFRKMR-------------------------------DSGVEVNELTLVSVL 237
+ G+ LFR+MR D G + +E T+V+VL
Sbjct: 187 GDVDMGLCLFRQMRKRSVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVL 246
Query: 238 SACANLGASELGKWVHEFVNKNCIILND--KLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
CA LG+ ++GKW+H + K+ + D +G AL D Y K G E A RVF + KN
Sbjct: 247 PICARLGSVDVGKWIHSYA-KSSGLYRDFVAVGNALVDFYNKSGMFETARRVFDEMPRKN 305
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
V +WN++I GLA++G GE V++ +M G++P+D T + VL+ C+HAGL E+G+E+
Sbjct: 306 VISWNTLISGLALNGNGELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRELLA 365
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP-MEPNAVLWGSLLTACASADD 414
+M +++EP ++HYGC+VDLL R+ + EAY++IR MP PNA LWGSLL+AC + D
Sbjct: 366 SMVEHHQIEPKLEHYGCMVDLLGRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRTHGD 425
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
VELA +A++ LI LEP+N GNYVL+SN+YA + +WD +R +M+E+N+ K PG S
Sbjct: 426 ---VELAHLAVKELIDLEPWNSGNYVLLSNMYAEEERWDKVANVRGMMREKNVKKTPGQS 482
Query: 475 VI 476
VI
Sbjct: 483 VI 484
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 156/378 (41%), Positives = 250/378 (66%), Gaps = 5/378 (1%)
Query: 142 GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
D+R + +HS+V++S F S+I+ L+ Y N GDV SA +FD+M EK++V W ++
Sbjct: 2 ADVRLGETIHSVVIRS-GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
ING + E + L+ +M G++ + T+VS+LSACA +GA LGK VH ++ K +
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
N L D+YA+CG +EEA +F +++KN +W S+I GLA++G G+EA+++F
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 322 MQMS-GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
M+ + G+ P ++T + +L ACSH G++++G E F MR +YK+EP ++H+GC+VDLL RA
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
+ +AYE I++MPM+PN V+W +LL AC D +LAE A ++++LEP + G+YV
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS---DLAEFARIQILQLEPNHSGDYV 297
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYS 500
L+SN+YA++ +W D K+R+ M + K PG S++E+ + VHEF++GD HP S+ IY+
Sbjct: 298 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA 357
Query: 501 MLEYVAISLREECYAARM 518
L+ + LR E Y ++
Sbjct: 358 KLKEMTGRLRSEGYVPQI 375
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 148/290 (51%), Gaps = 12/290 (4%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+ +H+ +I++ F + L L N +A A+ VF+++ A+N+VI G+
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHL---YANCGDVASAYKVFDKMPEKDLVAWNSVINGF 64
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSV 163
AE G + LYT+M G+ PD FT LL AC G L K VH ++K
Sbjct: 65 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GLTRN 123
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+HS L+ Y G V+ A+ LFD+M +KN V+WT++I G +E I+LF+ M
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 224 S-GVEVNELTLVSVLSACANLGASELG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
+ G+ E+T V +L AC++ G + G ++ + I + + D+ A+ G +
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 282 EEALRVFK-IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
++A K + ++ NV W +++G +H G+ + F ++Q+ ++P+
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPN 291
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 169/462 (36%), Positives = 274/462 (59%), Gaps = 15/462 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
+ VH+ ++K ++ DT + LI++ + + A VF+++ ++NT +
Sbjct: 455 RAVHSHVVKLG----SVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAA 510
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIH 165
G +L+ +M + D+ ++ +L +V+ L + + N V
Sbjct: 511 MVREGELAGVRKLFDEMP----EKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVV-- 564
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
S + +++ YC GD++ A+++FD+M KN+VTWT M++ ++ E LF +M+++
Sbjct: 565 SWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEAS 624
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
VE++ +VS+L+ACA G+ LGK +H +V K + + + AL DM+ KCG + A
Sbjct: 625 VELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRAD 684
Query: 286 RVFKI-VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
VF ++K+ +WNSIIGG A+HG G++A+++F QM+ G PD VT+I VL+AC+H
Sbjct: 685 YVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHM 744
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
G +++G+ F NM RDY + P ++HYGC++DLL R L+ EA ++I++MP EPN V+WGS
Sbjct: 745 GFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGS 804
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL+AC NVE AEIA+ L KL+P N GNY ++SNIYA QW D K R MK
Sbjct: 805 LLSACRLHK---NVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKG 861
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
K G S +E+N+ HEF VGD +H S++I M++ ++
Sbjct: 862 TGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLS 903
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 191/554 (34%), Positives = 290/554 (52%), Gaps = 79/554 (14%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LL KC+ L KQ+HAQI K + +L L ++ S + YA +F+ NP
Sbjct: 8 LLSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLL-LHCAITISDALHYALRLFHHFPNPD 66
Query: 96 TFAFNTVIRGYAEAGLG----HRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG-- 149
TF NT+IR + + H IQL Q L PDSFT+ LKA + R ++
Sbjct: 67 TFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPT---LSPDSFTFAFALKAVANSRHLRPGI 123
Query: 150 -VHSLVVKSKDFNSVIHSLTRLITFYC-------------------------------NF 177
+HS + F++ I T LI+ Y
Sbjct: 124 QLHSQAFR-HGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRC 182
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN--------------------------- 210
GDV+ AQ +F M +N+ +W M+ G+ K
Sbjct: 183 GDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFA 242
Query: 211 ----YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ E FR++ + NE++L VLSACA GA E GK +H FV K +
Sbjct: 243 HNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGS 302
Query: 267 LGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
+ AL D Y+KCG + A VF+ + + +++ +W SII GLA+HGCGEEA+++F +M+ S
Sbjct: 303 VNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEES 362
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G++PD +T I++L ACSH+GL+E+G +F M+ Y +EP ++HYGC+VDL RA L +
Sbjct: 363 GVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQK 422
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
AYE I MP+ PNA++W +LL AC+ N+E+AE+ RL +++P N G++VL+SN+
Sbjct: 423 AYEFICEMPVSPNAIIWRTLLGACSIH---GNIEMAELVKARLAEMDPDNSGDHVLLSNV 479
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
YA +W D +RR M E ++ K PG S+IEI+ V++ F+ G+ + +EE + L +
Sbjct: 480 YAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREI 539
Query: 506 AISLREEC-YAARM 518
+ LR E YA ++
Sbjct: 540 MLRLRTEAGYAPQL 553
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 173/460 (37%), Positives = 260/460 (56%), Gaps = 36/460 (7%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-- 141
A VF++ ++N +I GY + G + I +Y M G+ PD T L+ +C
Sbjct: 210 ARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSM 269
Query: 142 -GDLRQ-------------------VKGVHSLVVKSKDFNS-----------VIHSLTRL 170
GDL + V + + K D + I S T +
Sbjct: 270 LGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTM 329
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNE 230
I+ Y G + ++ LFD M EK+VV W AMI G V+ K ++ + LF++M+ S + +E
Sbjct: 330 ISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDE 389
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI 290
+T++ LSAC+ LGA ++G W+H ++ K + LN LG +L DMYAKCG I EAL VF
Sbjct: 390 ITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHG 449
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+ +N T+ +IIGGLA+HG A+ F +M +GI PD++T I +L+AC H G+I+ G
Sbjct: 450 IQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTG 509
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
++ F M+ + + P +KHY +VDLL RA LL+EA ++ +MPME +A +WG+LL C
Sbjct: 510 RDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCR 569
Query: 411 SADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN 470
NVEL E A ++L++L+P + G YVL+ +Y W+DA + RR+M ER + K
Sbjct: 570 MH---GNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKI 626
Query: 471 PGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
PGCS IE+N +V EF+V D P SE+IY L + +R
Sbjct: 627 PGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 211/419 (50%), Gaps = 39/419 (9%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LL+KC L+ KQ+ AQ+I + ++L +L S + Y+ + I N
Sbjct: 57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFC-ALSESRYLDYSVKILKGIEN 115
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL---DPDSFTYPILLKACGDLRQVKGV 150
P+ F++N IRG++E+ LY QM+ +G PD FTYP+L K C DLR
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 151 HSLV--VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
H ++ V V H I + + GD+++A+ +FD+ +++V+W +ING+ K
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI 235
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ I +++ M GV+ +++T++ ++S+C+ LG GK +E+V +N + + L
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295
Query: 269 AALTDMYAKCGYIEEALRVF-----KIVL--------------------------EKNVC 297
AL DM++KCG I EA R+F + ++ EK+V
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
WN++IGG G++A+ +F +MQ S KPD++T+I L+ACS G ++ G I +
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
+ Y + NV LVD+ + + EA V + N++ + +++ A D +
Sbjct: 416 EK-YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDAS 472
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 15/219 (6%)
Query: 22 KNSNTATKSHHHLPLLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNS 78
+ SNT + L C+ L +H I K S T L + N
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN- 439
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
I+ A VF+ I ++ + +I G A G I + +MI G+ PD T+ LL
Sbjct: 440 --ISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLL 497
Query: 139 KAC--GDLRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKN 194
AC G + Q + +KS+ + N + + ++ G ++ A L + M E +
Sbjct: 498 SACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEAD 557
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKM-----RDSGVEV 228
W A++ G N G +K+ DSG+ V
Sbjct: 558 AAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYV 596
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 173/471 (36%), Positives = 281/471 (59%), Gaps = 47/471 (9%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
L++ C+ + + + VH I K FD+ T L++ N+ +I A VF+++
Sbjct: 16 LVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQT---ALVDFYGNAGKIVEARRVFDEMS 72
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHS 152
FA+ T+I +A G QL+ +M P
Sbjct: 73 ERDVFAWTTMISVHARTGDMSSARQLFDEM------------P----------------- 103
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
V + +N++I +RL +V+SA+LLF QM +++++WT MI + + K +R
Sbjct: 104 -VRNTASWNAMIDGYSRL-------RNVESAELLFSQMPNRDIISWTTMIACYSQNKQFR 155
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E + +F +M+ +G++ +E+T+ +++SACA+LGA +LGK +H + + L+ +G+AL
Sbjct: 156 EALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALI 215
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
DMYAKCG ++++L VF + +KN+ WNSII GLA+HG EEA+ MF +MQ IKP+ V
Sbjct: 216 DMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGV 275
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
T I+VL AC+HAGL+E+G++ F +M RD+ + P ++HYGC+VDLL +A LL++A E++R+
Sbjct: 276 TFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRS 335
Query: 393 MPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQW 452
M MEPN+V+WG+LL C N+++A++A+ LEP N G Y L+ N+YA +W
Sbjct: 336 MRMEPNSVIWGALLGGCKLHR---NLKIAQVAVNESKVLEPNNSGYYTLLVNMYAEVNRW 392
Query: 453 DDAGKMRRLMKERNIVK-NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
+ +R MKE + K +PG S IE++ +H+F D H S+EIY++L
Sbjct: 393 SEVANIRATMKELGVEKTSPGSSWIEMDRKIHQFAASDKSHLASDEIYTLL 443
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 122 MIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFG 178
M+ + P SFT+ L+KAC + ++ + VH + K F+S + T L+ FY N G
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWK-YGFDSHVFVQTALVDFYGNAG 59
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
+ A+ +FD+M+E++V WT MI+ H + + LF +M
Sbjct: 60 KIVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMP---------------- 103
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
+ N A+ D Y++ +E A +F + +++ +
Sbjct: 104 -----------------------VRNTASWNAMIDGYSRLRNVESAELLFSQMPNRDIIS 140
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNM 357
W ++I + + EA+ +F +MQ +GI PD+VT+ +++AC+H G ++ GKEI Y M
Sbjct: 141 WTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAM 200
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ ++ + L+D+ + LD++ V + + N W S++ A
Sbjct: 201 EMGFDLDVYIG--SALIDMYAKCGSLDKSLVVFFKL-RKKNLFCWNSIIEGLA 250
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/372 (42%), Positives = 246/372 (66%), Gaps = 4/372 (1%)
Query: 143 DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
D+R+ + VHS+ +++ F S++ L+ Y G +SA LF+ M E+N+VTW ++I
Sbjct: 10 DVREGEKVHSIAIRN-GFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVI 68
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
NG+ E + LFR+M GVE + T+VS+LSACA LGA LG+ H ++ K +
Sbjct: 69 NGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLD 128
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
N G AL D+YAKCG I +A +VF + EK+V +W S+I GLA++G G+EA+++F ++
Sbjct: 129 GNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKEL 188
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
+ G+ P ++T + VL ACSH G++++G + F M+ +Y + P ++HYGC+VDLL RA L
Sbjct: 189 ERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGL 248
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLM 442
+ +A+E I+NMPM+PNAV+W +LL AC ++ L E+A +L++LEP + G+YVL+
Sbjct: 249 VKQAHEFIQNMPMQPNAVVWRTLLGACTIH---GHLALGEVARAQLLQLEPKHSGDYVLL 305
Query: 443 SNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
SN+YA++ +W D K+RR M + K PG S++E+ + +HEF++GD HP +EEIY L
Sbjct: 306 SNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKL 365
Query: 503 EYVAISLREECY 514
+ L+ E Y
Sbjct: 366 AEITKLLKLEGY 377
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 141/285 (49%), Gaps = 12/285 (4%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
++VH+ I+ F++ L + + ++ AH +F + + +N+VI GY
Sbjct: 15 EKVHSIAIRNGFESLVFVQNTLVHMYAACGHAES---AHKLFELMAERNLVTWNSVINGY 71
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSV 163
A G + + L+ +M G++PD FT LL AC +L + + H +VK +
Sbjct: 72 ALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKV-GLDGN 130
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+H+ L+ Y G ++ A +FD+M EK+VV+WT++I G +E ++LF+++
Sbjct: 131 LHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELER 190
Query: 224 SGVEVNELTLVSVLSACANLGASELG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
G+ +E+T V VL AC++ G + G + + I+ + + D+ + G ++
Sbjct: 191 KGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVK 250
Query: 283 EALRVFK-IVLEKNVCTWNSIIGGLAIHG---CGEEAVKMFWQMQ 323
+A + + ++ N W +++G IHG GE A Q++
Sbjct: 251 QAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLE 295
>gi|224118458|ref|XP_002331487.1| predicted protein [Populus trichocarpa]
gi|222873565|gb|EEF10696.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 200/568 (35%), Positives = 308/568 (54%), Gaps = 81/568 (14%)
Query: 23 NSNTATKSHHHLPL-LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQI 81
NS T T H + L ++ CT ++Q KQ+ A + K + + T +++ +L +S I
Sbjct: 42 NSPTNTIITHPILLAMESCTSMLQLKQIQAHMTKTALISHTFPVSRVLAFC-ALSDSGDI 100
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
+AHL+F+Q+ NP+T+ +NT+IRGY++A +G G + QM+ G++ D ++ LKAC
Sbjct: 101 NHAHLLFSQLQNPNTYIWNTMIRGYSKAKMGQTGFLFFCQMVQKGVEMDCRSFVFALKAC 160
Query: 142 GDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV--- 195
V K VH +V K F + L+ FY G + A+L+FD+++E++V
Sbjct: 161 EQFLGVLEGKSVHCVVWK-MGFVYTLLVQNGLVHFYGLRGCLGLARLVFDEISERDVVSW 219
Query: 196 ---------------------------------VTWTAMING---------------HVK 207
VT A+++ +VK
Sbjct: 220 TSMIDGYSKHKWCDEALKLFDSMLMYGVVEPNEVTMIAVLSSCSQKGDLILGKTFLEYVK 279
Query: 208 QKNYREGIDLFRKMRDSGVEVN-------------------ELTLVSVLSACANLGASEL 248
+N ++L + D V+ E TL VL C LG ++
Sbjct: 280 TRNVTRSLNLMNAILDMYVKCGCLDSAREIFDTMGAAFAPMENTLACVLPVCGQLGCLDV 339
Query: 249 GKWVHE-FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
G+W+H +V ++ L AL DMYAKCG I EA +VF + E+N+ +WNS+I A
Sbjct: 340 GQWIHRNYVRMRYNEISVILANALIDMYAKCGVIHEAAKVFNDMPERNLVSWNSMITAYA 399
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
HG ++A+ +F +M G KPDD+TL+ VL+ACSH GL+ +G+E F NM+R Y +EP
Sbjct: 400 SHGHAKQALSVFERMISGGFKPDDITLVGVLSACSHGGLVAEGQEYFQNMKRKYGIEPKN 459
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+HY C++DLL R LL++AYE+I MPMEP+A WG+L+ AC NVE+A+IA R
Sbjct: 460 EHYACMIDLLGRVGLLEDAYELITKMPMEPSAAAWGALVHACRMH---GNVEVAKIAAPR 516
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L++L+P + G YVL++NI A+ +W D RR+M+ER + K PG S++E+ HEF+
Sbjct: 517 LLELDPEDSGIYVLLANICASGRRWGDVKMARRMMRERRVKKIPGRSIVEVEGQFHEFLA 576
Query: 488 GDGRHPCSEEIYSMLEYV-AISLREECY 514
GD HP SE IY+ L+ + A+S E C+
Sbjct: 577 GDESHPQSEGIYNALDQLFAMSKLEGCF 604
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 284/497 (57%), Gaps = 18/497 (3%)
Query: 29 KSHHHLP-------LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQI 81
K HH P LLQ L QVHA +I + + S L KL+ + I
Sbjct: 4 KQHHKHPHSPAYNLLLQAGPRLKLLHQVHAHVIVSGYG---CSRFLLTKLLNLACAAGSI 60
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAE-AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
+Y +F + NP +F F ++IR ++ + YT+M+ + + P ++T+ ++K+
Sbjct: 61 SYTRQIFLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKS 120
Query: 141 CGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVT 197
C DL R + +H V+ + F S ++ T L++FY G + +A+ +FD+M +++VVT
Sbjct: 121 CADLVALRHGRIIHGHVLVN-GFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVT 179
Query: 198 WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
W +MI+G+ + +E I LF +M++ GVE N T VSVLSACA+LGA LG WVHE+
Sbjct: 180 WNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAV 239
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
N + LN LG +L +MY +CG + +A VF + E+NV W ++I G +G G +AV+
Sbjct: 240 GNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVE 299
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL 377
+F +M+ +G+ P+ +T +AVL+AC+HAGL+ +G+ +F +MR +Y++ P V+H+ CLVD+L
Sbjct: 300 LFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDML 359
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDG 437
RA LLDEAY I+ + EP +W ++L AC N L E + EP N
Sbjct: 360 GRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHK---NFGLGAQVAEHRLASEPGNPA 416
Query: 438 NYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEE 497
+YV++SNIYA + D +R M + + K G S I+++ + F +GD H + E
Sbjct: 417 HYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLFSMGDKSHTETNE 476
Query: 498 IYSMLEYVAISLREECY 514
IY L+ + RE Y
Sbjct: 477 IYHYLDQLMRKCREAGY 493
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/474 (36%), Positives = 268/474 (56%), Gaps = 38/474 (8%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI + +I A L+F+++ +P A+N +I GY + G ++L+ M + + PD
Sbjct: 162 LIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPD 221
Query: 131 SFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN----------- 176
S +L ACG +L + +H V K + H T LI Y N
Sbjct: 222 SVILCTVLSACGHAGNLSYGRTIHEFV-KDNGYAIDSHLQTALINMYANCGAMDLARKIY 280
Query: 177 --------------------FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID 216
G VK A+ +FDQM E+++V W+AMI+G+ + +E +
Sbjct: 281 DGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALK 340
Query: 217 LFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYA 276
LF +M +++T++SV+SAC+++GA W+H +V+++ + AL DMYA
Sbjct: 341 LFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYA 400
Query: 277 KCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIA 336
KCG + +A VF+ + KNV +W+S+I A+HG + A+K+F +M+ I+P+ VT I
Sbjct: 401 KCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIG 460
Query: 337 VLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPME 396
VL AC HAGL+E+G+++F +M ++ + P +HYGC+VDL CRA L +A E+I MP
Sbjct: 461 VLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFA 520
Query: 397 PNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAG 456
PN ++WGSL++AC + EL E A +RL++LEP +DG V++SNIYA + +W+D G
Sbjct: 521 PNVIIWGSLMSACQVHGEA---ELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVG 577
Query: 457 KMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+R+ M + I K S IEIN+ VH FM+ D H S+EIY L+ V L+
Sbjct: 578 LIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLK 631
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 195/406 (48%), Gaps = 45/406 (11%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKL----IESLVNSSQIAYAHLVFNQIINPSTFAFN 100
KQ+HAQI+ ++ ++T L+KL +SS + YA VF+QI NP T N
Sbjct: 31 HLKQIHAQILHSNTTPEN-TNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFSN 89
Query: 101 TVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKACGDLRQVKG---VHSLVVK 156
++R + + + I LY + N D F++P LLKA + +H L K
Sbjct: 90 QLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASK 149
Query: 157 SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID 216
F T LI Y + + A+LLFD+M + V W +I+G+ + +Y + +
Sbjct: 150 -LGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALR 208
Query: 217 LFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYA 276
LF MR S ++ + + L +VLSAC + G G+ +HEFV N ++ L AL +MYA
Sbjct: 209 LFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYA 268
Query: 277 KC-------------------------------GYIEEALRVFKIVLEKNVCTWNSIIGG 305
C G +++A +F ++E+++ W+++I G
Sbjct: 269 NCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISG 328
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVE 364
A +EA+K+F +M PD +T+++V++ACSH G + + I Y R +
Sbjct: 329 YAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRA 388
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+V + L+D+ + L +A EV NMP N + W S++ A A
Sbjct: 389 LSVNN--ALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFA 431
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 54/255 (21%)
Query: 34 LPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
L ++ C+H L Q +H + ++ F R +S LI+ + A VF
Sbjct: 358 LSVISACSHVGALAQANWIHTYVDRSGF-GRALSVNN--ALIDMYAKCGNLVKAREVFEN 414
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGV 150
+ + +++++I +A G I+L+ +M ++P+ T+ +L ACG
Sbjct: 415 MPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACG-------- 466
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT-----AMINGH 205
+ G V+ + LF M ++ ++ T M++ +
Sbjct: 467 -------------------------HAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLY 501
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN- 264
+ R+ I+L M N + S++SAC G +ELG EF K + L
Sbjct: 502 CRANFLRKAIELIETM---PFAPNVIIWGSLMSACQVHGEAELG----EFAAKRLLELEP 554
Query: 265 DKLGA--ALTDMYAK 277
D GA L+++YAK
Sbjct: 555 DHDGALVVLSNIYAK 569
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 295/534 (55%), Gaps = 76/534 (14%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPS 95
++ C+ + + + A +IK + I D L + I + + + Y F Q+ NP+
Sbjct: 46 IKNCSTINELHGLCASMIKTN----AIQDCFLVHQFISASFALNSVHYPVFAFTQMENPN 101
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDPDSFTYPILLKACGDLRQV---KGVH 151
F +N +I+G+ G R +Q Y M+ + + P S+T+ L+KAC + V + VH
Sbjct: 102 VFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVH 161
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNF-------------------------------GDV 180
+ K K F S + T L+ FY GD+
Sbjct: 162 CHIWK-KGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDM 220
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVK-------------------------------QK 209
SA+ LF++M E+N TW MI+G+ + K
Sbjct: 221 DSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNK 280
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
Y++ + ++ +MR +G+ +E+T+ +V SACA++GA ELGK +H +V + L+ +G+
Sbjct: 281 QYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGS 340
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG ++ +L +F + +KN+ WN++I GLA+HG E+A++MF M+ I P
Sbjct: 341 ALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMP 400
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+ VT I++L+AC+HAGL+++G+ F +M RDY + P+++HYGC+VD+L ++ L+EA E+
Sbjct: 401 NGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALEL 460
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I++M EPN+++WG+LL C N E+AE A+E+L+ LEP N G+Y L+ ++YA +
Sbjct: 461 IKSMEFEPNSIIWGALLNGCKL---HGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEE 517
Query: 450 AQWDDAGKMRRLMKERNIVKN-PGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
W + +R +MKE+ + K PG S IE+ +H+F HP S++IY +L
Sbjct: 518 KDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFIL 571
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/526 (33%), Positives = 305/526 (57%), Gaps = 41/526 (7%)
Query: 23 NSNTATKSHHHLPLLQK-CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQI 81
S + +L ++ K CT + +Q HA +IK+ + + +++ S + + +
Sbjct: 16 TSKLIISNQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIESFAASRILAFCASPLGN--M 73
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDPDSFTYPILLKA 140
YA+LVF Q+ NP+ F++NTVIRG++++ + L+ M + + ++P TYP + KA
Sbjct: 74 DYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKA 133
Query: 141 CGDL---RQVKGVHSLVVK--------------------------SKDFNSVIH----SL 167
L +H ++K + FN + S
Sbjct: 134 YSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSW 193
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
+I G++ ++ LFD+M KN ++W +MI G+V+ ++E + LF KM++ ++
Sbjct: 194 NSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQ 253
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+E T+VS+L+A A +GA G W+HE++ KN + LN + A+ DMY KCG I AL+V
Sbjct: 254 PSEFTMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQV 313
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
F+ + +++ +WNS+I GLA++GC +EA+ +F ++ S +KPD ++ +AVLTAC+H ++
Sbjct: 314 FEKIPCRSLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMV 373
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
++G E F M+ Y++EP++KHY +VD++ RA L+EA + I+ MP+E +A++WG LL+
Sbjct: 374 DEGMEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLS 433
Query: 408 ACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
AC N E+A+ A E++ +L+P YVLM+NI+A + A + R M+ + +
Sbjct: 434 ACRIY---GNTEMAKRAAEKVNELDPEETMGYVLMANIHAWGNNFVGAMEKRVAMRMKKV 490
Query: 468 VKNPGCSVIEINDVVHEFMVGDGR-HPCSEEIYSMLEYVAISLREE 512
K PG S IE+++ VHEF+ G GR H ++EIY +L + + L+++
Sbjct: 491 EKEPGGSFIEVDEEVHEFIAGGGRLHRKAQEIYIVLGQLGVMLQDK 536
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 286/500 (57%), Gaps = 46/500 (9%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q +Q+HA +I+A+ I +T+L + ++ YA +FN++ + +++N++I
Sbjct: 497 QGRQIHAHLIRANITKNIIVETELVHMYSE---CGRLNYAKEIFNRMAERNAYSWNSMIE 553
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVK----- 156
GY + G ++L+ QM NG+ PD F+ +L +C D ++ + +H+ +V+
Sbjct: 554 GYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEE 613
Query: 157 ----------------SKDFNSVIHSLT---------RLITFYCNFGDVKSAQLLFDQMT 191
S D+ ++ T +++ + N G A+ LFDQM
Sbjct: 614 EGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQME 673
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
++N W +++ G+ + +E + F +M +S +E + LT+V++++ C++L A E G
Sbjct: 674 QRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQ 733
Query: 252 VHEFVNK----NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
+H + K NC ++ L AL DMY+KCG I +A VF + KN+ +WN++I G +
Sbjct: 734 LHSLIIKKGFVNCSVV---LETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYS 790
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
HGC +EA+ ++ +M G+ P++VT +A+L+ACSH GL+E+G IF +M+ DY +E
Sbjct: 791 KHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKA 850
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+HY C+VDLL RA L++A E + MP+EP WG+LL AC D +++ +A +R
Sbjct: 851 EHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKD---MDMGRLAAQR 907
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L +L+P N G YV+MSNIYAA +W + +R++MK + + K+PG S IEIN + F
Sbjct: 908 LFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHA 967
Query: 488 GDGRHPCSEEIYSMLEYVAI 507
G HP +EEIY+ L ++ +
Sbjct: 968 GSKTHPKTEEIYNNLRHLTL 987
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 202/405 (49%), Gaps = 15/405 (3%)
Query: 16 NSANSHKNSNTATKSH---HHLP---LLQKCTHLVQF---KQVHAQIIKASFDNRTISDT 66
N +S K ++ TK + LP L+Q C F K +H Q+I ++ T
Sbjct: 51 NGPDSPKPTSIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMT 110
Query: 67 QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG 126
++ L + YA +F ++ + A+NT+I YA ++LY +M G+G
Sbjct: 111 KILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSG 170
Query: 127 LDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSA 183
D FT+P ++KAC D+ V+ + S VVK+ N + L+ Y FG + A
Sbjct: 171 NFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKA-GLNCNLFVGGALVDGYARFGWMDDA 229
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
D++ +VVTW A+I G+VK ++ E +F +M GV + T S L C L
Sbjct: 230 VTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGAL 289
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
+ + GK VH + + +G AL DMYAKC E L+VF + E+N TWNSII
Sbjct: 290 RSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSII 349
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
A G +A+ +F +MQ SG K + L ++L A + I KG+E+ ++ R+ +
Sbjct: 350 SAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNL-L 408
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
++ LVD+ + +++EA++V R++ +E N V + +LL
Sbjct: 409 NSDIILGSALVDMYSKCGMVEEAHQVFRSL-LERNEVSYNALLAG 452
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 184/364 (50%), Gaps = 10/364 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+Q+ + ++KA + L++ + A ++I S +N VI GY
Sbjct: 195 RQLQSSVVKAGLNCNLFVG---GALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGY 251
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSV 163
+ ++ +M+ G+ PD+FT+ L+ CG LR G VHS ++ F
Sbjct: 252 VKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIAC-GFKGD 310
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
LI Y D +S +FD+M E+N VTW ++I+ + ++ + + LF +M++
Sbjct: 311 TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE 370
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
SG + N L S+L A A L G+ +H + +N + + LG+AL DMY+KCG +EE
Sbjct: 371 SGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEE 430
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM-SGIKPDDVTLIAVLTACS 342
A +VF+ +LE+N ++N+++ G G EEA++++ MQ GI+PD T +LT C+
Sbjct: 431 AHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCA 490
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
+ +G++I ++ R + N+ LV + L+ A E+ M E NA W
Sbjct: 491 NQRNDNQGRQIHAHLIRA-NITKNIIVETELVHMYSECGRLNYAKEIFNRMA-ERNAYSW 548
Query: 403 GSLL 406
S++
Sbjct: 549 NSMI 552
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 195/398 (48%), Gaps = 42/398 (10%)
Query: 47 KQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
+++H +++ N SD L + L++ + AH VF ++ + ++N ++ G
Sbjct: 397 RELHGHLVR----NLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAG 452
Query: 106 YAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKACGDLR---QVKGVHSLVVKSKDFN 161
Y + G ++LY M +G+ PD FT+ LL C + R Q + +H+ ++++
Sbjct: 453 YVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITK 512
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
++I T L+ Y G + A+ +F++M E+N +W +MI G+ + +E + LF++M
Sbjct: 513 NIIVE-TELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQM 571
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
+ +G++ + +L S+LS+C +L S+ G+ +H F+ +N + L L DMYAKCG +
Sbjct: 572 QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSM 631
Query: 282 EEALRVFKIVLEK-------------------------------NVCTWNSIIGGLAIHG 310
+ A +V+ ++K N WNSI+ G A G
Sbjct: 632 DYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKG 691
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
+E+ F +M S I+ D +T++ ++ CS +E G ++ + + V +V
Sbjct: 692 LKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLE 751
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
LVD+ + + +A V NM + N V W ++++
Sbjct: 752 TALVDMYSKCGAITKARTVFDNMNGK-NIVSWNAMISG 788
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 181/347 (52%), Gaps = 9/347 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQVH+++I F T LI+ VF+++ + +N++I
Sbjct: 296 KQVHSKLIACGFKGDTFVGN---ALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAE 352
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTY-PILLKACG--DLRQVKGVHSLVVKSKDFNSV 163
A+ G + + L+ +M +G + F IL+ + G D+ + + +H +V++ NS
Sbjct: 353 AQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNL-LNSD 411
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR- 222
I + L+ Y G V+ A +F + E+N V++ A++ G+V++ E ++L+ M+
Sbjct: 412 IILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQS 471
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ G++ ++ T ++L+ CAN G+ +H + + I N + L MY++CG +
Sbjct: 472 EDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLN 531
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A +F + E+N +WNS+I G +G +EA+++F QMQ++GIKPD +L ++L++C
Sbjct: 532 YAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCV 591
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+KG+E+ + R+ E + LVD+ + +D A++V
Sbjct: 592 SLSDSQKGRELHNFIVRNTMEEEGILQV-VLVDMYAKCGSMDYAWKV 637
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/502 (35%), Positives = 289/502 (57%), Gaps = 52/502 (10%)
Query: 29 KSHHHLPL----LQKCTHLV--QFKQVHAQIIKASFDNRTIS---DTQLAKLIESLVNSS 79
+SH+HL L L H Q Q+ AQ+I N +S + KLI + ++
Sbjct: 4 QSHNHLKLTTLLLNYAEHFQTKQLLQIQAQLIT----NPPLSLHPNLIAVKLIGACAANA 59
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG--NGLDPDSFTYPIL 137
+ +A L+F Q+ NP+ F++N +I+ + G + + + + + +P+ + Y L
Sbjct: 60 NLYHAQLIFAQLPNPNVFSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSL 119
Query: 138 LKACGDLRQVKG---VHSLVVKSKDFNSV------------------------------I 164
+KAC L + VH++V+KS N++ +
Sbjct: 120 IKACAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDV 179
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD- 223
S +++ YC GD++SA+ +FDQM E++V++W AMI G+V+ Y + I++F +M+
Sbjct: 180 VSWNTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKV 239
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
GV +++TLVSVLSACA++GA + G+W+ FV LN LG AL DMYAKCG +EE
Sbjct: 240 GGVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEE 299
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A R+F + E++V +W+++I G HG +EA + +M G+KP++VT + +L+ACSH
Sbjct: 300 ARRIFDGMRERDVISWSTMICGSGTHGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSH 359
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
AGL++KG E+F M ++Y++ P V HYGC++DLL RA LDEA ++I +MP+EPN ++WG
Sbjct: 360 AGLVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVIVWG 419
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL C D E + L++L+ G+YV ++ A+ + DDA M+
Sbjct: 420 ALLGGCRIHKD---FRRGERVAQHLLELDSEYTGSYVYIAGAKASVGRVDDAANCWLRMQ 476
Query: 464 ERNIVKNPGCSVIEINDVVHEF 485
+ I+K+PGCS IE+++ VHEF
Sbjct: 477 HKGIIKDPGCSKIEVHNTVHEF 498
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 270/424 (63%), Gaps = 17/424 (4%)
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGL-DPDSFTYPILLKACGDLRQVKG---VHSLV 154
+NT+IRGY+ + I LY MI G+ P++FT+P LL +C L ++ VHS +
Sbjct: 2 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG 214
+K F S + LI Y FG++ A+ LFD+ +++V++ MI G+ +
Sbjct: 62 IK-HGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESA 120
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV-HEFVNKNCIILNDKLGAALTD 273
+ LF +M++S +E+TLV+VLSACA LGA +LGK + H+++ N L AA+ D
Sbjct: 121 LCLFGEMQNS----DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMD 176
Query: 274 MYAKCGYIEEALRVFKIVLEKNVCT---WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
MYAKCG I+ AL +F+ V KN+ T +NS+I GLA HG GE A+ +F ++ +G+KPD
Sbjct: 177 MYAKCGSIDSALEIFRRV-GKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPD 235
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+VT + VL AC H+GLIE+GK++F +M Y ++P ++HYGC+VDLL R L+EAY+++
Sbjct: 236 EVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLV 295
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+ MP E N+V+W +LL+AC + NV++ EIA ++L+++E + YVL+SNI A
Sbjct: 296 QKMPFEANSVIWRALLSACRTH---GNVKIGEIAGQKLLEMEAQHGARYVLLSNILADAN 352
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
QW++A ++R++M++ I K PG S IE+ +H F+ D HP +EI ML+ +A+ L+
Sbjct: 353 QWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLK 412
Query: 511 EECY 514
Y
Sbjct: 413 SAGY 416
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 132/301 (43%), Gaps = 20/301 (6%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL C L + +VH+ IIK F++ L L N + A +F++ +
Sbjct: 41 LLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGN---LNLARTLFDESL 97
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
++NT+I+GYAE + L+ +M + D T +L AC L K
Sbjct: 98 VRDLVSYNTMIKGYAEVNQPESALCLFGEM----QNSDEVTLVAVLSACARLGAFDLGKR 153
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE--KNVVTWTAMINGHVK 207
++ +++ FN ++ Y G + SA +F ++ + K + +MI G +
Sbjct: 154 LYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQ 213
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE-FVNKNCIILNDK 266
I +FR++ +G++ +E+T V VL AC + G E GK + E N I +
Sbjct: 214 HGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQME 273
Query: 267 LGAALTDMYAKCGYIEEALR-VFKIVLEKNVCTWNSIIGGLAIHG---CGEEAVKMFWQM 322
+ D+ + G +EEA V K+ E N W +++ HG GE A + +M
Sbjct: 274 HYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEM 333
Query: 323 Q 323
+
Sbjct: 334 E 334
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 130/320 (40%), Gaps = 68/320 (21%)
Query: 7 PNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQF---KQVHAQIIK-ASFDNRT 62
P S L F NS + + A +L C L F K+++ Q I+ F+ T
Sbjct: 117 PESALCLFGEMQNSDEVTLVA--------VLSACARLGAFDLGKRLYHQYIENGVFNQNT 168
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIIN--PSTFAFNTVIRGYAEAGLGHRGIQLYT 120
I A +++ I A +F ++ + F FN++I G A+ GLG I ++
Sbjct: 169 ILT---AAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFR 225
Query: 121 QMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
++I GL PD T+ +L ACG HS G +
Sbjct: 226 ELISTGLKPDEVTFVGVLCACG--------HS-------------------------GLI 252
Query: 181 KSAQLLFDQM-----TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
+ + LF+ M + + + M++ + E DL +KM E N + +
Sbjct: 253 EEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMP---FEANSVIWRA 309
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAA---LTDMYAKCGYIEEALRVFKIVL 292
+LSAC G ++G E + + + + GA L+++ A EEA +V K++
Sbjct: 310 LLSACRTHGNVKIG----EIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVME 365
Query: 293 EKNV---CTWNSIIGGLAIH 309
+ + W+ I G AIH
Sbjct: 366 DHGIRKPPGWSYIELGGAIH 385
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/496 (35%), Positives = 276/496 (55%), Gaps = 38/496 (7%)
Query: 55 KASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
+ +FD D + A +I LV + A + Q + ++ ++I GY+ AG
Sbjct: 160 RRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPA 219
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGDLR---------------QVKGVHSLVVKSK 158
+ + M+ +G+ PD L AC L+ +++ +LVV
Sbjct: 220 DAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALI 279
Query: 159 DF----------NSVIHSLTR---------LITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
D +V ++ R +I YC G V A+ LFDQM ++V+T+
Sbjct: 280 DMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFN 339
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
+MI G++ R+ + LF +MR G+ + T+VS+L+ACA+LGA G+ +H + +
Sbjct: 340 SMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQR 399
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ + LG AL DMY KCG ++EA VF + E++V TW ++I GLA +G G++A++ F
Sbjct: 400 IVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESF 459
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
QM+ G +P VT IAVLTACSH+ L+++G+ F MR +K+ P V+HYGC++DLL R
Sbjct: 460 CQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLAR 519
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
+ LLDEA +++ MPM+PNAV+WGS+L+AC N++LA A E L+KL P D Y
Sbjct: 520 SGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHK---NIDLARHAAEHLLKLAPEEDAVY 576
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
V + NIY QW DA ++R LM+ER + K G S I + VH+F+ D HP + EI
Sbjct: 577 VQLYNIYIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFVANDQSHPWTLEIM 636
Query: 500 SMLEYVAISLREECYA 515
+M+E +A L+ Y+
Sbjct: 637 AMMEEIACRLKSVGYS 652
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 192/437 (43%), Gaps = 74/437 (16%)
Query: 45 QFKQVHAQIIKAS-FDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
Q Q+HA + + +R ++ L+ L ++ + Y +F+++ + +TF F+T +
Sbjct: 14 QASQLHALLTTSGRIAHRPSAEHLLSSLTNTISAPRHLRYVLSLFDRLPHSTTFLFDTAL 73
Query: 104 RG--YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFN 161
R A AG H + L +M G+ +FT+ + + C + + L++ +
Sbjct: 74 RACLQASAGADH-PVLLLRRMRSGGVRTGAFTFHFVFRCCAAGARARAGLCLMLHAACLR 132
Query: 162 SVIHSLTRLIT-----FYCNFGDVKSAQLLFD---------------------------- 188
+++ S L+ Y + G A+ FD
Sbjct: 133 TMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARR 192
Query: 189 ---QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA 245
Q E+NVV+WT++I G+ + + + F M GV +E+ ++ LSAC+ L
Sbjct: 193 LLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKN 252
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE------------ 293
+LG+ +H V + I + D L AL DMYAKCG I +A VF V
Sbjct: 253 LDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIID 312
Query: 294 --------------------KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVT 333
++V T+NS+I G G +A+++F QM+ G++ D+ T
Sbjct: 313 GYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFT 372
Query: 334 LIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
++++LTAC+ G + G+ + ++ + VE +V L+D+ + +DEA V M
Sbjct: 373 VVSLLTACASLGALPHGRALHASIEQRI-VEEDVYLGTALLDMYMKCGRVDEATAVFHRM 431
Query: 394 PMEPNAVLWGSLLTACA 410
E + W +++ A
Sbjct: 432 G-ERDVHTWTAMIAGLA 447
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 85/237 (35%), Gaps = 38/237 (16%)
Query: 144 LRQVKGVHSLVVKSKDF---NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
+RQ +H+L+ S S H L+ L ++ LFD++ +
Sbjct: 12 VRQASQLHALLTTSGRIAHRPSAEHLLSSLTNTISAPRHLRYVLSLFDRLPHSTTFLFDT 71
Query: 201 MINGHVK-QKNYREGIDLFRKMRDSGVEVNELTL--VSVLSACANLGASELGKWVHEFVN 257
+ ++ + L R+MR GV T V A + L +H
Sbjct: 72 ALRACLQASAGADHPVLLLRRMRSGGVRTGAFTFHFVFRCCAAGARARAGLCLMLHAACL 131
Query: 258 KNCIILNDKLGA-ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAV 316
+ + L A L MYA G ++A R F + K+ W ++IGGL G +EA
Sbjct: 132 RTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEAR 191
Query: 317 KMFWQ-------------------------------MQMSGIKPDDVTLIAVLTACS 342
++ Q M G+ PD+V +I L+ACS
Sbjct: 192 RLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACS 248
>gi|449498539|ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/402 (40%), Positives = 252/402 (62%), Gaps = 8/402 (1%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A L F I P F N++IR ++ + + H + LYT M N + P+++T+P +LK+ D
Sbjct: 63 AFLFFTHIPKPHVFICNSLIRAFSHSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKSLAD 122
Query: 144 LRQVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
+ + G VH+ VVKS S ++ L+ Y + G + + +FD+M +VV+WT
Sbjct: 123 FKDLVGGQSVHTHVVKSGH-ASDLYVQNTLMDVYASCGKMGLCKKVFDEMLHTDVVSWTI 181
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
+I G+ + + +F +M+ +GV+ N +T+V+ L+ACA+ GA E+G W+HEFV
Sbjct: 182 LIMGYRVSFMLDDALIVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIHEFVKTKR 241
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
++ LG AL DMY KCG I+EAL VF+ + EKNV TWN I GLA CGEEA+ F
Sbjct: 242 WEVDVVLGTALIDMYGKCGRIKEALAVFQAMKEKNVYTWNVFINGLASAKCGEEAIAWFK 301
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLVDLLCR 379
+M G++ DDVTL+AVL+ACSH+GL+ G++IF+++ + P +KHY C+VD+L R
Sbjct: 302 RMDEEGVEADDVTLVAVLSACSHSGLVNSGRQIFWSLIHGRFGFSPGIKHYSCMVDILAR 361
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
++EA +I +MP E +WGSLLT + ++E++EIA +L+++EP N G Y
Sbjct: 362 NGCIEEACVMINDMPFEATRSMWGSLLTGSRAH---GSLEVSEIAARKLVEMEPENGGYY 418
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
V++SNIYA +W + K+R +MKER + K+ G S +E+ +V
Sbjct: 419 VVLSNIYAEMGKWSEVEKVREIMKERGLKKDLGSSSVELQEV 460
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 152/323 (47%), Gaps = 28/323 (8%)
Query: 8 NSQLTHFTNSANSHKNSNTATKSHHHLPLLQKC----THLVQFKQVHAQIIKASF-DNRT 62
+S++ H +H N N+ + +++ P + K LV + VH ++K+ +
Sbjct: 87 HSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKSLADFKDLVGGQSVHTHVVKSGHASDLY 146
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
+ +T L++ + ++ VF+++++ ++ +I GY + + + ++ QM
Sbjct: 147 VQNT----LMDVYASCGKMGLCKKVFDEMLHTDVVSWTILIMGYRVSFMLDDALIVFEQM 202
Query: 123 IGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
G+DP+ T L AC ++ +H VK+K + + T LI Y G
Sbjct: 203 QYAGVDPNRVTIVNALAACASFGAIEMGVWIHEF-VKTKRWEVDVVLGTALIDMYGKCGR 261
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
+K A +F M EKNV TW ING K E I F++M + GVE +++TLV+VLSA
Sbjct: 262 IKEALAVFQAMKEKNVYTWNVFINGLASAKCGEEAIAWFKRMDEEGVEADDVTLVAVLSA 321
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLG--------AALTDMYAKCGYIEEA-LRVFKI 290
C++ G G+ + +++ + G + + D+ A+ G IEEA + + +
Sbjct: 322 CSHSGLVNSGRQIF------WSLIHGRFGFSPGIKHYSCMVDILARNGCIEEACVMINDM 375
Query: 291 VLEKNVCTWNSIIGGLAIHGCGE 313
E W S++ G HG E
Sbjct: 376 PFEATRSMWGSLLTGSRAHGSLE 398
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 164/342 (47%), Positives = 226/342 (66%), Gaps = 3/342 (0%)
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
S +I + G ++ A +FD+M E+ V++WT +ING VK + E ++ FRKM+ S
Sbjct: 81 SWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMGLFEEALEWFRKMQVSK 140
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
VE + +T+V+VLSACANLGA LG WVH + K + N K+ +L D+Y++CG IE A
Sbjct: 141 VEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNVKICNSLIDLYSRCGAIELAR 200
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
+VF+ + E+ + +WNSIIGGLA +G EEA++ F MQ G KP+DV+ LTACSH G
Sbjct: 201 QVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQGFKPNDVSFTGALTACSHTG 260
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
L+++G + F M R +K+ P ++HYGC+VDL RA L++A V++NMPM+PN V+ GSL
Sbjct: 261 LVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLEDAMSVVQNMPMKPNEVVVGSL 320
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L AC + D VELAE M L+ L+P D NYVL+SNIYAA +WD A K R MK
Sbjct: 321 LAACRTRGD---VELAERLMNYLVHLDPGADSNYVLLSNIYAAVGRWDGACKQRMTMKAL 377
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
I K PG S IEI +HEF+ GD H +E+IYSMLE ++
Sbjct: 378 GIQKKPGFSSIEIGCDIHEFVAGDKSHDKAEDIYSMLELLSF 419
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 38/226 (16%)
Query: 221 MRDSGVEVNELTLVSVLSACANLGA--SELGKWVHEFVNKNCI-ILNDKLGAALTDMYAK 277
MR ++ N +T +++LS CA+L + + LG +H + K + N +G AL DMYAK
Sbjct: 1 MRLLEIDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAK 60
Query: 278 CGYIE-------------------------------EALRVFKIVLEKNVCTWNSIIGGL 306
CG++E EA+ VF + E+ V +W +I G
Sbjct: 61 CGHVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGF 120
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEP 365
G EEA++ F +MQ+S ++PD VT++ VL+AC++ G + G + Y +++ +
Sbjct: 121 VKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLR--D 178
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
NVK L+DL R ++ A +V M E V W S++ A+
Sbjct: 179 NVKICNSLIDLYSRCGAIELARQVFEKMG-ERTLVSWNSIIGGLAA 223
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 118/245 (48%), Gaps = 6/245 (2%)
Query: 50 HAQIIKASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE 108
H ++ + FD + ++ +I+ V + +I A VF+++ ++ +I G+ +
Sbjct: 63 HVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVK 122
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIH 165
GL ++ + +M + ++PD T +L AC +L + VH +K K +
Sbjct: 123 MGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALK-KGLRDNVK 181
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
LI Y G ++ A+ +F++M E+ +V+W ++I G E ++ F M+ G
Sbjct: 182 ICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQG 241
Query: 226 VEVNELTLVSVLSACANLGASELG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
+ N+++ L+AC++ G + G K+ + I + + D+Y++ G +E+A
Sbjct: 242 FKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLEDA 301
Query: 285 LRVFK 289
+ V +
Sbjct: 302 MSVVQ 306
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/477 (37%), Positives = 282/477 (59%), Gaps = 12/477 (2%)
Query: 43 LVQFKQ-VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
L+Q Q VH +I++A + T L + I+ A ++F+++ + +
Sbjct: 163 LLQLGQKVHMEIVEAGLELEPRVGTSLVGM---YAKCGDISKARVIFDRLPEKNVVTWTL 219
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSK 158
+I GYA+ G ++L M + P+ T+ +L+ C L K VH +++S
Sbjct: 220 LIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQS- 278
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
+ + + LIT YC G ++ A+ LF + ++VVTWTAM+ G+ + + E I+LF
Sbjct: 279 GYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLF 338
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
R+M+ G++ +++T SVL++C++ + GK +H+ + L+ L +AL MYAKC
Sbjct: 339 RRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKC 398
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGL-AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
G +++A VF + E+NV W +II G A HG EA++ F QM+ GIKPD VT +V
Sbjct: 399 GSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSV 458
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
L+AC+H GL+E+G++ F +M DY ++P V+HY C VDLL RA L+EA VI +MP P
Sbjct: 459 LSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIP 518
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
+WG+LL+AC D VE E A E ++KL+P +DG YV +S+IYAA +++DA K
Sbjct: 519 GPSVWGALLSACRVHSD---VERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEK 575
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+R++M++R++VK PG S IE++ VH F V D HP SE+IY L + ++E Y
Sbjct: 576 VRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGY 632
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 153/293 (52%), Gaps = 8/293 (2%)
Query: 122 MIGNGLDPDSFTYPILLKACGDLR---QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG 178
MI G S + LL+ C LR Q + VH+ ++KS + L++ Y G
Sbjct: 38 MILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKS-GIQPNRYLENTLLSMYAKCG 96
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
+ A+ +FD + ++N+V+WTAMI V E + M+ +G + +++T VS+L+
Sbjct: 97 SLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLN 156
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
A N +LG+ VH + + + L ++G +L MYAKCG I +A +F + EKNV T
Sbjct: 157 AFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVT 216
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNM 357
W +I G A G + A+++ MQ + + P+ +T ++L C+ +E GK++ Y +
Sbjct: 217 WTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYII 276
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ Y E V L+ + C+ L+EA ++ ++P + V W +++T A
Sbjct: 277 QSGYGRELWV--VNSLITMYCKCGGLEEARKLFSDLPHR-DVVTWTAMVTGYA 326
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/456 (39%), Positives = 258/456 (56%), Gaps = 42/456 (9%)
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG------DLRQ 146
N ++ T I Y ++G + + QM ++P+ T+ LL AC +
Sbjct: 53 NDPIVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISF 112
Query: 147 VKGVHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM--------------- 190
+H+ V K D N V+ T LI Y G V+SA+L FDQM
Sbjct: 113 GTAIHAHVRKLGLDINDVMVG-TALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGY 171
Query: 191 ----------------TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
KN ++WTA+I G VK+ + E ++ FR+M+ SGV + +T++
Sbjct: 172 MRNGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVI 231
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
+V++ACANLG LG WVH V N K+ +L DMY++CG I+ A +VF + ++
Sbjct: 232 AVIAACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQR 291
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
+ +WNSII G A++G +EA+ F MQ G KPD V+ L ACSHAGLI +G IF
Sbjct: 292 TLVSWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIF 351
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
+M+R ++ P ++HYGCLVDL RA L+EA V++NMPM+PN V+ GSLL AC +
Sbjct: 352 EHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQ-- 409
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
N+ LAE M LI+L+ D NYVL+SNIYAA +WD A K+RR MKER I K PG S
Sbjct: 410 -GNIGLAENVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFS 468
Query: 475 VIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
IEI+ +H+F+ GD H + IY+ LE+++ L+
Sbjct: 469 SIEIDSSIHKFVSGDKSHEEKDHIYAALEFLSFELQ 504
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/489 (36%), Positives = 289/489 (59%), Gaps = 15/489 (3%)
Query: 36 LLQKCT--HLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNS-SQIAYAHLVFNQII 92
L KCT L KQ+HA + IS + +KL+E S +++A L F+QI
Sbjct: 8 FLSKCTTLSLPHTKQLHAHLFTTGQFRLPISPAR-SKLLELYALSLGNLSFAILTFSQIR 66
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD----LRQVK 148
PST +N +IRG+ ++ Y MI D+ T +LKAC L ++
Sbjct: 67 TPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQ 126
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
+H+ +V+ K F + T L+ Y G++ SA+ +FD+M ++++ +W A+I+G +
Sbjct: 127 -IHTHIVR-KGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQG 184
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
E + LF++M G + NE++++ LSACA LG + G+ +H ++ +N ++
Sbjct: 185 SKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVC 244
Query: 269 AALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
+ DMYAKCG++++A VF+ + K++ TWN++I A+HG G +A+++F +M SG+
Sbjct: 245 NVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGV 304
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
PDDV+ +AVL AC+H GL+E+G +F +M + V+PNVKHYG +VDLL RA L EAY
Sbjct: 305 SPDDVSYLAVLCACNHGGLVEEGFRLFNSME-NCGVKPNVKHYGSVVDLLGRAGRLHEAY 363
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
+++ +MP P+ VLW +LL A + NVE+AE +L+++ + G++VL+SN+YA
Sbjct: 364 DIVNSMPTVPDIVLWQTLLGASRTH---RNVEIAETVSRKLVEMGSNHCGDFVLLSNVYA 420
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
A+ +W D G++R MK R++ K PG S IE N V+H+F D H EIY+ L+ +
Sbjct: 421 ARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRF 480
Query: 508 SLREECYAA 516
++E Y A
Sbjct: 481 RVKEYGYVA 489
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 273/468 (58%), Gaps = 40/468 (8%)
Query: 87 VFNQIINPS-TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG--- 142
+FN+ ++ + F++N+VI A +G ++ ++ M L P+ T+P +K+C
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90
Query: 143 DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
DL + H + F + + L+ Y G+++ A+ LFD+++ +N+V+WT+MI
Sbjct: 91 DLHSGRQAHQQALIF-GFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 149
Query: 203 NGHVKQKNYREGIDLF--------------------------------RKMRDSGVEVNE 230
G+V+ + + +F R ++D + N
Sbjct: 150 TGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNA 209
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI 290
+TL +VL ACA+ G+ LGK +H+ V K + N +G ++ DMY KCG +E A + F
Sbjct: 210 VTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDR 269
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+ EKNV +W++++ G +HG +EA+++F++M M+G+KP+ +T ++VL ACSHAGL+E+G
Sbjct: 270 MREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 329
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
F M ++ VEP V+HYGC+VDLL RA L EA+++I+ M + P+ V+WG+LL AC
Sbjct: 330 WHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACR 389
Query: 411 SADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN 470
NV+L EI+ +L +L+P N G YVL+SNIYA +W+D +MR LMK +VK
Sbjct: 390 MH---KNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKP 446
Query: 471 PGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
PG S+++I VH F+VGD HP E+IY LE +++ L+E Y M
Sbjct: 447 PGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDM 494
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 134/264 (50%), Gaps = 14/264 (5%)
Query: 59 DNRTISD-------TQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGL 111
D RT+ D +I V + A VF+ + ++N++I YA+ G+
Sbjct: 129 DARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGM 188
Query: 112 GHRGIQLYTQMIGNG-LDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSL 167
++++ +M+ +G ++ ++ T +L AC G R K +H V+K S +
Sbjct: 189 STESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIK-MGLESNVFVG 247
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
T +I YC G V+ A+ FD+M EKNV +W+AM+ G+ + +E +++F +M +GV+
Sbjct: 248 TSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVK 307
Query: 228 VNELTLVSVLSACANLGASELG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
N +T VSVL+AC++ G E G W ++ + + + D+ + GY++EA
Sbjct: 308 PNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFD 367
Query: 287 VFK-IVLEKNVCTWNSIIGGLAIH 309
+ K + L + W +++G +H
Sbjct: 368 LIKGMKLRPDFVVWGALLGACRMH 391
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/454 (36%), Positives = 259/454 (57%), Gaps = 42/454 (9%)
Query: 55 KASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
K FD T D + ++V ++ A +F+++ T ++NT++ GYA+AG
Sbjct: 259 KKVFDEMTTRDVVSWNTAMAAMVRKGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAE 318
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
+L+ +M G + S + +++
Sbjct: 319 EAFELFQRMPGRN-------------------------------------VVSWSTVVSA 341
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
YC GD++ A+++FD+M KN+VTWT M++ ++ E LF +M+++ +E++ + +
Sbjct: 342 YCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAV 401
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI-VL 292
VS+L+ACA G LGK +H V + + + + AL DM+ KCG + A +F ++
Sbjct: 402 VSILAACAESGCLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIV 461
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
EK+ +WN IIGG A+HG GE+A+ +F QM+ G PD VTLI VL+AC+H GL+E+G+
Sbjct: 462 EKDSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMGLVEEGRR 521
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
F NM DY ++P ++HYGC+VDLL R L+ EA ++I++MP EPN V+WGSLL+AC
Sbjct: 522 FFANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNEVIWGSLLSACRLH 581
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
NVE AE+A L L+P N GNY ++SNIYA +W D K R MK K G
Sbjct: 582 K---NVEYAELAANELSNLQPSNAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAG 638
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
S IE+++ HEF VGD +HP S++I M++ ++
Sbjct: 639 SSWIELDEAFHEFTVGDRKHPESDQISDMIDRLS 672
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/534 (34%), Positives = 293/534 (54%), Gaps = 32/534 (5%)
Query: 7 PNSQLTHFTNSANSHKNSNTATK--SHHHLPLLQKCTHLV----------QFKQVHAQII 54
PNS H S N A SH P Q C L+ VH ++
Sbjct: 37 PNSNNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLV 96
Query: 55 KASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHR 114
FD T+L + L + A VF++ + + +N + R A AG G+
Sbjct: 97 DGGFDQDPFLATKLINMFSEL---DTVDNARKVFDKTRKRTIYVWNALFRALALAGRGND 153
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKAC-------GDLRQVKGVHSLVVKSKDFNSVIHSL 167
++LY +M G+ D FTY LLKAC L++ K +H+ +++ + + +H +
Sbjct: 154 VLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILR-HGYGAHVHVM 212
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM----RD 223
T L+ Y FG V A +FD+M KNVV+W+AMI + K E ++LFR+M D
Sbjct: 213 TTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHD 272
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
S N +T+VSVL ACA A E GK +H ++ + + + +AL MYA+CG +E
Sbjct: 273 S--VPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLES 330
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
+F + +K+V WNS+I +HG G +A+K+F +M G P ++ I+VL ACSH
Sbjct: 331 GQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSH 390
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
GL+E+GK++F +M +++ ++P+V+HY C+VDLL RA LDEA ++I ++ +EP +WG
Sbjct: 391 TGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWG 450
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
SLL AC +VELAE A +RL KLEP N GNYVL+++IYA WD+ ++++L+
Sbjct: 451 SLLGACRIH---CHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLD 507
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
R + K PG S IE+ ++ F D +P E+++++L ++ +++ Y +
Sbjct: 508 SRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQ 561
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 156/362 (43%), Gaps = 49/362 (13%)
Query: 57 SFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
SF+ T ++ LI+SL + A + + NP+ +I A +
Sbjct: 30 SFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDAL 89
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN 176
++ ++ G D D F T+LI +
Sbjct: 90 DVHQLLVDGGFDQDPFL---------------------------------ATKLINMFSE 116
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
V +A+ +FD+ ++ + W A+ + ++L+ +M GV + T +
Sbjct: 117 LDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYL 176
Query: 237 LSACANLGASEL-------GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
L AC ASE GK +H + ++ + + L DMYA+ G + A VF
Sbjct: 177 LKACV---ASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFD 233
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK--PDDVTLIAVLTACSHAGLI 347
+ KNV +W+++I A +G EA+++F +M ++ P+ VT+++VL AC+ +
Sbjct: 234 EMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAAL 293
Query: 348 EKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
E+GK I Y +RR ++ + L+ + R L E+ ++I + + + VLW SL+
Sbjct: 294 EQGKLIHAYILRRG--LDSILPVISALITMYARCGKL-ESGQLIFDRMHKKDVVLWNSLI 350
Query: 407 TA 408
++
Sbjct: 351 SS 352
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 280/469 (59%), Gaps = 13/469 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
Q+HA +K D SD Q+ L++ + Y +F+++ + ++ T+I G+
Sbjct: 404 QIHAYAMKNGLD----SDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGH 459
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR---QVKGVHSLVVKSKDFNSV 163
A+ G R ++L+ ++ G+D D +L AC L+ VK +HS +++ + V
Sbjct: 460 AQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLV 519
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ + ++ Y G+V A +F+ + K+VV+WT+MI+ +V E ++LF M++
Sbjct: 520 LQN--GIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKE 577
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
+GVE + ++LVS+LSA A+L A + GK +H F+ + +L L + L DMYA+CG +E+
Sbjct: 578 TGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEK 637
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
+ VF + K++ W S+I +HGCG A+ +F +M+ I PD + +AVL ACSH
Sbjct: 638 SRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSH 697
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
+GL+ +G+ +M+ +Y++EP +HY CLVDLL RA L+EAY+ ++ M +EP A +W
Sbjct: 698 SGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWC 757
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL AC +N EL EIA ++L++++P N GNYVL+SN+Y+A+ +W D +R MK
Sbjct: 758 ALLGACQIH---SNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMK 814
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
+ KNPGCS IE+ + VH FM D HP S EIYS L + L +E
Sbjct: 815 ASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKE 863
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 225/445 (50%), Gaps = 28/445 (6%)
Query: 14 FTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQII--KASFDNRTISDTQLAKL 71
F N + S + + A S L L L + +QVHA +I A F++ +S +L
Sbjct: 67 FANQSPSQFSLDEAYSSV--LELCGSKKALSEGQQVHAHMITSNALFNSVFLS----TRL 120
Query: 72 IESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS 131
+ + A +F+ + + + F +N +I Y G ++LY +M +G+ D+
Sbjct: 121 VFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDA 180
Query: 132 FTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
T+P +LKACG D R VH L +K + + S++ ++ Y D+ A+ LFD
Sbjct: 181 CTFPCILKACGLLKDRRYGAEVHGLAIK-EGYVSIVFVANSIVGMYTKCNDLNGARQLFD 239
Query: 189 QMTEK-NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+M EK +VV+W +MI+ + E + LF +M+ + + N T V+ L AC + +
Sbjct: 240 RMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIK 299
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
G ++H V K+ +N + AL MYA+ G + EA +F + + + +WNS++ G
Sbjct: 300 QGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFV 359
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPN 366
+G EA++ + +M+ +G KPD V +I+++ A + +G G +I Y M+ ++ +
Sbjct: 360 QNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNG--LDSD 417
Query: 367 VKHYGCLVDL---LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
++ LVD+ C + +D ++ MP + + V W +++ A +G++ E+
Sbjct: 418 LQVGNSLVDMYAKFCSMKYMDCIFD---KMP-DKDVVSWTTIIA--GHAQNGSHSRALEL 471
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAA 448
E ++LE D + +++S+I A
Sbjct: 472 FRE--VQLEGI-DLDVMMISSILLA 493
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 147/259 (56%), Gaps = 4/259 (1%)
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLV 154
++N++I Y+ G ++L+ +M L P+++T+ L+AC D ++Q +H+ V
Sbjct: 249 SWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATV 308
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG 214
+KS + +V + LI Y FG + A +F M + + ++W +M++G V+ Y E
Sbjct: 309 LKSSYYINVFVA-NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEA 367
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
+ + +MRD+G + + + ++S+++A A G + G +H + KN + + ++G +L DM
Sbjct: 368 LQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDM 427
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
YAK ++ +F + +K+V +W +II G A +G A+++F ++Q+ GI D + +
Sbjct: 428 YAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMI 487
Query: 335 IAVLTACSHAGLIEKGKEI 353
++L ACS LI KEI
Sbjct: 488 SSILLACSGLKLISSVKEI 506
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/487 (36%), Positives = 278/487 (57%), Gaps = 17/487 (3%)
Query: 36 LLQKCTHLVQFKQ---VHAQIIKASF-DNRTISDTQLAKLIESL-VNSSQIAYAHLVFNQ 90
LL++CT L + +Q VHA ++ + F DN + L +I ++ + A +F++
Sbjct: 93 LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLV----LQNIIVNMYAKCGCLDDARRMFDE 148
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQV 147
+ + +I G+++ + L+ QM+ G P+ FT LLKA G L
Sbjct: 149 MPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPG 208
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+H+ +K + S ++ + L+ Y G + +AQL FD M K+ V+W A+I+GH +
Sbjct: 209 TQLHAFCLKY-GYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHAR 267
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
+ + L KM+ + T SVLSACA++GA E GKWVH + K+ + L +
Sbjct: 268 KGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFI 327
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
G L DMYAK G I++A RVF +++ +V +WN+++ G A HG G+E + F QM GI
Sbjct: 328 GNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGI 387
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
+P++++ + VLTACSH+GL+++G F M++ YKVEP+V HY VDLL R LLD A
Sbjct: 388 EPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAE 446
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
IR MP+EP A +WG+LL AC N+EL A ER +L+P + G +L+SNIYA
Sbjct: 447 RFIREMPIEPTAAVWGALLGACRMH---KNMELGVYAAERAFELDPHDSGPRMLLSNIYA 503
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
+ +W D K+R++MKE + K P CS +EI + VH F+ D HP +EI E ++
Sbjct: 504 SAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISG 563
Query: 508 SLREECY 514
++E Y
Sbjct: 564 KIKEIGY 570
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 285/551 (51%), Gaps = 74/551 (13%)
Query: 32 HHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
H + L+ + +Q+H Q+ + N S + + I S + + + YA +F +
Sbjct: 44 HFIDLIHASNSTHKLRQIHGQLYRC---NVFSSSRVVTQFISSCSSLNSVDYAISIFQRF 100
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA----------- 140
+++ FN +IRG AE I + M+ + PD T+P +LK+
Sbjct: 101 ELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGR 160
Query: 141 ---CGDLRQVKGVHSLV--------VKSKDFNSVIHSLTR---------------LITFY 174
CG L+ S V VK ++ S + LI Y
Sbjct: 161 ALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGY 220
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR------------ 222
C GD+ A LFD M +K+ +W ++ING +K + +LF KM
Sbjct: 221 CRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVN 280
Query: 223 -------------------DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
+ G N+ T+VS LSACA +GA + G +H +++ N L
Sbjct: 281 GFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKL 340
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
N +G AL DMYAKCG IE A +VF EK + W+ +I G AIHG +A++ F M+
Sbjct: 341 NLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMK 400
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
+G KPD V +AVL ACSH+G + +G + F NMRR Y +EP++KHY +VD+L RA L
Sbjct: 401 FTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRL 460
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
DEA + IR MP+ P+ V+WG+L AC + NVE+AE+A ++L++LEP + G+YV +S
Sbjct: 461 DEALKFIRAMPITPDFVVWGALFCACRTHK---NVEMAELASKKLLQLEPKHPGSYVFLS 517
Query: 444 NIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
N YA+ +WDDA ++R M++ K+PG S IE++ +H F+ GD H + EIYS L+
Sbjct: 518 NAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLD 577
Query: 504 YVAISLREECY 514
++ S RE+ Y
Sbjct: 578 EISASAREKGY 588
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/469 (36%), Positives = 281/469 (59%), Gaps = 13/469 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
Q+HA +K D SD Q+ L++ + Y +F+++ + ++ T+I G+
Sbjct: 440 QIHAYAMKNGLD----SDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGH 495
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR---QVKGVHSLVVKSKDFNSV 163
A+ G R ++L+ ++ G+D D +L AC L+ VK +HS +++ + V
Sbjct: 496 AQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLV 555
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ + ++ Y G+V A +F+ + K+VV+WT+MI+ +V E ++LF M++
Sbjct: 556 LQN--GIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKE 613
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
+GVE + ++LVS+LSA A+L A + GK +H F+ + +L L + L DMYA+CG +E+
Sbjct: 614 TGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEK 673
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
+ VF + K++ W S+I +HGCG A+ +F +M+ I PD + +AVL ACSH
Sbjct: 674 SRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSH 733
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
+GL+ +G+ +M+ +Y++EP +HY CLVDLL RA L+EAY+ ++ M +EP A +W
Sbjct: 734 SGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWC 793
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL AC +N EL EIA ++L++++P N GNYVL+SN+YAA+ +W D ++R MK
Sbjct: 794 ALLGACQIH---SNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMK 850
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
+ KNPGCS IE+ + VH FM D HP S EIYS L + L +E
Sbjct: 851 ASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKE 899
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 225/445 (50%), Gaps = 28/445 (6%)
Query: 14 FTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQII--KASFDNRTISDTQLAKL 71
F N + S + + A S L L L + +QVHA +I A F++ +S +L
Sbjct: 103 FANQSPSQFSLDEAYSSV--LELCGSKKALSEGQQVHAHMITSNALFNSVFLS----TRL 156
Query: 72 IESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS 131
+ + A +F+ + + + F +N +I Y G ++LY +M +G+ D+
Sbjct: 157 VFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDA 216
Query: 132 FTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
T+P +LKACG D R VH L +K + + S++ ++ Y D+ A+ LFD
Sbjct: 217 CTFPCILKACGLLKDRRCGAEVHGLAIK-EGYVSIVFVANSIVGMYTKCNDLNGARQLFD 275
Query: 189 QMTEK-NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+M EK +VV+W +MI+ + E + LF +M+ + + N T V+ L AC + +
Sbjct: 276 RMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIK 335
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
G ++H V K+ +N + AL MYA+ G + EA +F + + + +WNS++ G
Sbjct: 336 QGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFV 395
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPN 366
+G EA++ + +M+ +G KPD V +I+++ A + +G G +I Y M+ ++ +
Sbjct: 396 QNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNG--LDSD 453
Query: 367 VKHYGCLVDL---LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
++ LVD+ C + +D ++ MP + + V W +++ A +G++ E+
Sbjct: 454 LQVGNSLVDMYAKFCSMKYMDCIFD---KMP-DKDVVSWTTIIA--GHAQNGSHSRALEL 507
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAA 448
E ++LE D + +++S+I A
Sbjct: 508 FRE--VQLEGI-DLDVMMISSILLA 529
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 147/259 (56%), Gaps = 4/259 (1%)
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLV 154
++N++I Y+ G ++L+ +M L P+++T+ L+AC D ++Q +H+ V
Sbjct: 285 SWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATV 344
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG 214
+KS + +V + LI Y FG + A +F M + + ++W +M++G V+ Y E
Sbjct: 345 LKSSYYINVFVA-NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEA 403
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
+ + +MRD+G + + + ++S+++A A G + G +H + KN + + ++G +L DM
Sbjct: 404 LQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDM 463
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
YAK ++ +F + +K+V +W +II G A +G A+++F ++Q+ GI D + +
Sbjct: 464 YAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMI 523
Query: 335 IAVLTACSHAGLIEKGKEI 353
++L ACS LI KEI
Sbjct: 524 SSILLACSGLKLISSVKEI 542
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/409 (39%), Positives = 254/409 (62%), Gaps = 6/409 (1%)
Query: 112 GHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLI 171
G G QL++ ++ GL D+ L++ +V S+ ++ D + I +I
Sbjct: 85 GTLGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKD--IFCWNVMI 142
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR-DSGVEVNE 230
+ Y G++ A+ LFD M +NVV+WT +I + + K E +++FR+M+ + G+E +
Sbjct: 143 SGYVKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDG 202
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI 290
+ L+SVLSAC +LGA +LG+WVH FV + + L A+ DMY K G + +A+ VF+
Sbjct: 203 VALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEG 262
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+ +K+V TW ++I G A+HG G EA++MF +M+M + P+DVT +A+L+ACSH GL + G
Sbjct: 263 MDQKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLG 322
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ F M Y+++ V+HYGC+VDLL RA L EA +++++MP + NA +WG+LL A
Sbjct: 323 RWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAAR 382
Query: 411 SADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN 470
+ D EL + A+ LI+LEP N GNY+L+SNIYA + +WDD K+R+ MK+R +
Sbjct: 383 THGDA---ELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLRKQMKDRGLRNV 439
Query: 471 PGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARMP 519
PG S IE++ +VHEF DG HPC +I +L + ++ + A +P
Sbjct: 440 PGASSIEVDGMVHEFTSRDGSHPCLHKICKVLCEITTDMKSISFVALLP 488
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 145/304 (47%), Gaps = 43/304 (14%)
Query: 48 QVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
Q+H+ I++A SD + A LI++ + ++A A VF+Q + F +N +I GY
Sbjct: 90 QLHSVIVRAGL----ASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGY 145
Query: 107 AEAG-----------LGHRGIQLYTQMIG---------------------NGLDPDSFTY 134
++G + R + +T +IG G++PD
Sbjct: 146 VKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVAL 205
Query: 135 PILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
+L ACGDL V + VH VV+ + I + +I Y G V+ A +F+ M
Sbjct: 206 LSVLSACGDLGAVDLGEWVHRFVVR-RGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMD 264
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+K+VVTWT +I G E I++FR+M V N++T +++LSAC+++G ++LG+W
Sbjct: 265 QKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRW 324
Query: 252 VHE-FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIH 309
+ V++ I + + D+ + GY+ EA + + + + N W +++ H
Sbjct: 325 YFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTH 384
Query: 310 GCGE 313
G E
Sbjct: 385 GDAE 388
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/477 (36%), Positives = 263/477 (55%), Gaps = 36/477 (7%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
L++ + I A +F++ ++ + +NT++ Y GL + + +M+ +G PD
Sbjct: 281 LVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPD 340
Query: 131 SFTYPILLKACGDLRQV---KGVHSLVVKS------------------------------ 157
T + AC +L V K H V+++
Sbjct: 341 RITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFD 400
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
+ N S LI + GD++SA +F M + ++V+W MI V++ ++E I+L
Sbjct: 401 RMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIEL 460
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
FR M+ G+ +++T+V V SAC LGA +L KW+H ++ K I + LG AL DM+A+
Sbjct: 461 FRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFAR 520
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG + A++VF +++++V W + IG +A+ G G A+++F +M GIKPD V +A+
Sbjct: 521 CGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVAL 580
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
LTA SH GL+E+G IF +M+ Y + P HYGC+VDLL RA LL EA +I +M MEP
Sbjct: 581 LTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEP 640
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
N V+WGSLL AC NV++A A ER+ +L+P G +VL+SNIYA+ +WDD K
Sbjct: 641 NDVIWGSLLAACRVHK---NVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAK 697
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+R +KE+ K PG S IEIN + EF GD HP I ML+ + LR+ Y
Sbjct: 698 VRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGY 754
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 191/360 (53%), Gaps = 15/360 (4%)
Query: 2 LKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPL--LQKCTHLVQFKQVHAQIIKASFD 59
L L+P + T+ A ++N H P +KC + + KQ+H+QI K +
Sbjct: 7 LSTLIPATP----TSVALPNQNELKILTKHRSSPTGSFKKCKTMTELKQLHSQITKNGLN 62
Query: 60 NRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINP-----STFAFNTVIRGYAEAGLGHR 114
+ +S T L + + YA I + + F+++IRG++ GLG++
Sbjct: 63 HHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYK 122
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLI 171
I ++ Q++ G PD+FT+P +L AC L + VH +VK F + LI
Sbjct: 123 AIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVK-MGFERDMFVENSLI 181
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
FY G++ + +FD+M+E+NVV+WT++I G+ K+ Y+E + LF +M + G+ N +
Sbjct: 182 HFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSV 241
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
T+V V+SACA L +LG+ V + + + +N + AL DMY KCG I++A ++F
Sbjct: 242 TMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDEC 301
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
++KN+ +N+I+ G E + + +M G +PD +T+++ ++ACS + GK
Sbjct: 302 VDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGK 361
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 201/434 (46%), Gaps = 46/434 (10%)
Query: 36 LLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L CT L + QVH I+K F+ + L I +I VF+++
Sbjct: 145 VLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSL---IHFYGECGEIDCMRRVFDKMS 201
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHS 152
+ ++ ++I GYA+ G + L+ +M+ G+ P+S T ++ AC L+ ++
Sbjct: 202 ERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQ 261
Query: 153 LVVKSKDFNSVIHSL--TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
+ + +++L L+ Y G + A+ +FD+ +KN+V + +++ +V+Q
Sbjct: 262 VCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGL 321
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
RE + + +M G + +T++S +SAC+ L GKW H +V +N + D + A
Sbjct: 322 AREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNA 381
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE----------------- 313
+ +MY KCG E A RVF +L K +WNS+I G +G E
Sbjct: 382 IINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSW 441
Query: 314 --------------EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMR 358
EA+++F MQ GI D VT++ V +AC + G ++ K I Y +
Sbjct: 442 NTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKK 501
Query: 359 RDYKVEPNVKHYG-CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+D + H G LVD+ R A +V M ++ + W + + A A +G
Sbjct: 502 KDIHFD---MHLGTALVDMFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGNGTG 557
Query: 418 -VELAEIAMERLIK 430
+EL + +++ IK
Sbjct: 558 AIELFDEMLQQGIK 571
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 22/264 (8%)
Query: 60 NRTISDTQLA--KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQ 117
+R ++ T+++ LI V + + A +F+ + + ++NT+I + + I+
Sbjct: 400 DRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIE 459
Query: 118 LYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFY 174
L+ M G+ D T + ACG L + K +H + K KD + +H T L+ +
Sbjct: 460 LFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYI-KKKDIHFDMHLGTALVDMF 518
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
GD +SA +F++M +++V WTA I + N I+LF +M G++ + + V
Sbjct: 519 ARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFV 578
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA--------LTDMYAKCGYIEEALR 286
++L+A ++ G E G W H F + + D G A + D+ + G + EAL
Sbjct: 579 ALLTALSHGGLVEQG-W-HIFRS-----MKDIYGIAPQAVHYGCMVDLLGRAGLLSEALS 631
Query: 287 VF-KIVLEKNVCTWNSIIGGLAIH 309
+ + +E N W S++ +H
Sbjct: 632 LINSMQMEPNDVIWGSLLAACRVH 655
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/483 (37%), Positives = 283/483 (58%), Gaps = 14/483 (2%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPS 95
L KC ++ Q KQVHAQ+ I D +A KL+ + AHL+FN++
Sbjct: 10 LFKCRNIFQIKQVHAQVTTTGI----IHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERD 65
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHS 152
+++ +I G+ + G R Q + ++I G PD+F+ P ++KAC D L + +HS
Sbjct: 66 PVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHS 125
Query: 153 LVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
V+K+ ++ + S L+ Y G + +A+ LFD+M +K++VT T MI G+ +
Sbjct: 126 TVLKNGLHLDNFVCST--LVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKP 183
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
E LF +MR G +++ +V++++ACA LGA + VH++V L+ +LG A+
Sbjct: 184 NESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAM 243
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
DMYAKCG I+ + +F + +KNV +W+++IG HG G EA+++F M SGI P+
Sbjct: 244 IDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNR 303
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
+T I++L ACSHAGL++ G ++F M Y V P+VKHY C+VDLL RA LD+A +I
Sbjct: 304 ITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIE 363
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
NM +E + +W + L AC V+LAE A + L+ L+ N G+Y+L+SNIYA +
Sbjct: 364 NMEVEKDEGIWCAFLGACRIH---RQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGR 420
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
W D K+R LM +R + K PG + IE++++++ F GD H S EIY ML+ ++ L
Sbjct: 421 WKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLES 480
Query: 512 ECY 514
Y
Sbjct: 481 AGY 483
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 295/534 (55%), Gaps = 76/534 (14%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPS 95
++ C+ + + + A +IK + I D L + I + + + Y F Q+ NP+
Sbjct: 143 IKNCSTINELHGLCASMIKTN----AIQDCFLVHQFISASFALNSVHYPVFAFTQMENPN 198
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDPDSFTYPILLKACGDLRQV---KGVH 151
F +N +I+G+ G R +Q Y M+ + + P S+T+ L+KAC + V + VH
Sbjct: 199 VFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVH 258
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNF-------------------------------GDV 180
+ K K F S + T L+ FY GD+
Sbjct: 259 CHIWK-KGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSALARVGDM 317
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVK-------------------------------QK 209
SA+ LF++M E+N TW MI+G+ + K
Sbjct: 318 DSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNK 377
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
Y++ + ++ +MR +G+ +E+T+ +V SACA++GA ELGK +H +V + L+ +G+
Sbjct: 378 QYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGS 437
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG ++ +L +F + +KN+ WN++I GLA+HG E+A++MF M+ I P
Sbjct: 438 ALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMP 497
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+ VT I++L+AC+HAGL+++G+ F +M RDY + P+++HYGC+VD+L ++ L+EA E+
Sbjct: 498 NGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALEL 557
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I++M EPN+++WG+LL C N E+AE A+E+L+ LEP N G+Y L+ ++YA +
Sbjct: 558 IKSMEFEPNSIIWGALLNGCKLH---GNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEE 614
Query: 450 AQWDDAGKMRRLMKERNIVKN-PGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
W + +R +MKE+ + K PG S IE+ +H+F HP S++IY +L
Sbjct: 615 KDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFVL 668
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 190/506 (37%), Positives = 285/506 (56%), Gaps = 73/506 (14%)
Query: 42 HLVQFKQVHAQIIKASFDNRT--ISDTQLA---KLIESLVNSSQIAYAHLVFNQIINPST 96
+L KQ+HA +I F+N + D L L+ + YAH +F QI P T
Sbjct: 14 NLKTLKQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDT 73
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSL 153
F +N +IRG +++ R I LYT+M + + DS+T+P +LKAC L V VH +
Sbjct: 74 FMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNTGSAVHGM 133
Query: 154 VV-------------------KSKDFNSV-----------IHSLTRLITFYCNFGDVKSA 183
V+ K D N + + + LI Y GD+K A
Sbjct: 134 VLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVA 193
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNY-------------------------------R 212
+ LF++M E+++V+W MI G+VKQ +
Sbjct: 194 RKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSK 253
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI-ILNDKLGAAL 271
+ ++LF +M +GV +E+TL+S+LSACA+LG E GK VH V + + L+ LG AL
Sbjct: 254 QALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNAL 313
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
DMYAKCG I+E+L VF + +K+V +WNS+I G+A+HG G+E++ +F MQ + I P++
Sbjct: 314 IDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNE 373
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
+T + VL ACSHAG I++G + F M +YK+EPN++H GC+VD+L RA LL EA + I
Sbjct: 374 ITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFID 433
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
+M +EPNA++W +LL AC D VELA++A E+L + + G+YVLMSN+YA++ +
Sbjct: 434 SMKIEPNAIIWRTLLAACKVHGD---VELAKVANEKLFSMRKDHSGDYVLMSNLYASRGE 490
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIE 477
WD A K+R+LM + + K G S +E
Sbjct: 491 WDGAEKVRKLMDDSGVTKIRGSSFVE 516
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 9/176 (5%)
Query: 34 LPLLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
L LL C L K+VHA++++ S +S LI+ I + VF
Sbjct: 275 LSLLSACADLGDLENGKKVHAKVMEISMGK--LSTLLGNALIDMYAKCGNIKESLDVFWS 332
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQV 147
I + ++N+VI G A G G + L+ M + P+ T+ +L AC G++ +
Sbjct: 333 ITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEG 392
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM-TEKNVVTWTAMI 202
L+ I ++ G +K A D M E N + W ++
Sbjct: 393 YKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLL 448
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 291/509 (57%), Gaps = 15/509 (2%)
Query: 3 KQLVPNSQLTHFTNSANSHKN-SNTATKSHHHLPLLQKCT---HLVQFKQVHAQIIKASF 58
+ L PN+ +++ +++ HHH +LQ C L +Q+H +++ +
Sbjct: 34 RALPPNTGFAASPPPPSTNPRLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGL 93
Query: 59 DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQL 118
T+ T KL++ Q+ +A +F+ + + F +N +IR YA G ++L
Sbjct: 94 GPDTVLST---KLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRL 150
Query: 119 YTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYC 175
Y M+ +G++PD+FTYP++LKAC DL + VH V ++ + + ++ Y
Sbjct: 151 YRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTR-WGQDVFVCAGVVDMYA 209
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
G V A+ +FD + ++ V W +MI + + E + L R M +G+ TLVS
Sbjct: 210 KCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVS 269
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
+SA A+ A G+ +H F + L DKL +L DMYAK G+++ A +F+ ++++
Sbjct: 270 AVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRE 329
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIF 354
+ +WN++I G +HG +EA+ +F +M+ + PD++T + VL+AC+H G++E+ KE F
Sbjct: 330 LVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFF 389
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
Y M Y ++P V+HY C++D+L +EAY++I+ M +EP++ +WG+LL C
Sbjct: 390 YLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHK- 448
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
NVEL E+A+++LI+LEP + GNYV +SNIYA +W+ A ++R+LM R + K CS
Sbjct: 449 --NVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACS 506
Query: 475 VIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
IE+ H F+VGD HP S+EIY LE
Sbjct: 507 WIELKGKTHGFLVGDASHPRSDEIYGELE 535
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/485 (34%), Positives = 286/485 (58%), Gaps = 14/485 (2%)
Query: 36 LLQKCTHLVQFKQ---VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L KCT+L + KQ +HA I ++F++ + L ++ + A +F+++
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLV---LLNFILNMYAKCGSLEEAQDLFDKMP 167
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKG 149
++ +I GY+++G + L+ +M+ G P+ FT LLKA G +
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQ 227
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H+ +K ++ +H + L+ Y + ++ A+++F+ + KNVV+W A+I GH ++
Sbjct: 228 LHAFSLKY-GYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKG 286
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ LF +M G E T SV +ACA+ G+ E GKWVH V K+ +G
Sbjct: 287 EGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGN 346
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
L DMYAK G I++A +VF+ ++++++ +WNSII G A HG G EA+++F QM + ++P
Sbjct: 347 TLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQP 406
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+++T ++VLTACSH+GL+++G + ++ + + +K+E V H+ +VDLL RA L+EA +
Sbjct: 407 NEITFLSVLTACSHSGLLDEG-QYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKF 465
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I MP++P A +WG+LL +C N++L A E++ +L+P + G +VL+SNIYA+
Sbjct: 466 IEEMPIKPTAAVWGALLGSCRMHK---NMDLGVYAAEQIFELDPHDSGPHVLLSNIYASA 522
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+ DA K+R++MKE + K P CS +EI + VH F+ D HP EEI M E ++ +
Sbjct: 523 GRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKI 582
Query: 510 REECY 514
+E Y
Sbjct: 583 KEIGY 587
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 181/345 (52%), Gaps = 10/345 (2%)
Query: 127 LDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSA 183
L+P+ Y +L C LR++K +H+ + +S F + L ++ Y G ++ A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHI-QSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
Q LFD+M K++V+WT +I+G+ + E + LF KM G + NE TL S+L A
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
+ G+ +H F K +N +G++L DMYA+ ++ EA +F + KNV +WN++I
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
G A G GE +++F QM G +P T +V TAC+ +G +E+GK + ++ +
Sbjct: 280 AGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKS-GG 338
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN-VELAE 422
+P L+D+ ++ + +A +V R + ++ + V W S+++ A GA ++L E
Sbjct: 339 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHGLGAEALQLFE 397
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
++ K++P N+ ++ + + D+ LMK+ I
Sbjct: 398 QMLK--AKVQP-NEITFLSVLTACSHSGLLDEGQYYFELMKKHKI 439
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/481 (37%), Positives = 262/481 (54%), Gaps = 7/481 (1%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP + + L Q+H+ K + D L I +I A +F +
Sbjct: 228 LPAVAELQELRLGMQIHSLATKTGCYSH---DYVLTGFISLYSKCGKIKMASTLFREFRR 284
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSL 153
P A+N +I GY G + L+ +++ +G S T L+ G L + +H
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGY 344
Query: 154 VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYRE 213
+KS +F S T L T Y +++SA+ LFD+ EK++ +W AMI+G+ + +
Sbjct: 345 SLKS-NFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 214 GIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTD 273
I LFR+M++S N +T+ +LSACA LGA LGKWVH+ V + + AL
Sbjct: 404 AISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463
Query: 274 MYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVT 333
MYAKCG I EA R+F + +KN TWN++I G +HG G+EA+ +F +M SGI P VT
Sbjct: 464 MYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVT 523
Query: 334 LIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
+ VL ACSHAGL+++G EIF +M Y EP+VKHY C+VD+L RA L A + I M
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAM 583
Query: 394 PMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWD 453
P++P +W +LL AC D LA E+L +L+P N G +VL+SNI++A +
Sbjct: 584 PIQPGPSVWETLLGACRIHKD---TNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYP 640
Query: 454 DAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREEC 513
A +R+ K+R + K PG ++IEI + H F GD HP + I+ LE + +RE
Sbjct: 641 QAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAG 700
Query: 514 Y 514
Y
Sbjct: 701 Y 701
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 208/482 (43%), Gaps = 65/482 (13%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L L ++ T + Q HAQI+ F N + L KL + L + I YA +F +
Sbjct: 24 LDLFKRSTSISHLAQTHAQIVLHGFRNDI---SLLTKLTQRLSDLGAIYYARDIFLSVQR 80
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDPDSFTYPILLKACGDLRQVKG--- 149
P F FN ++RG++ H + ++ + L P+S TY + A R +
Sbjct: 81 PDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCV 140
Query: 150 VHS-LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
+H +V D ++ S ++ Y F V+ A+ +FD+M EK+ + W MI+G+ K
Sbjct: 141 IHGQAIVDGCDSELLLGS--NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 209 KNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
+ Y E I +FR + +S ++ TL+ +L A A L LG +H K +D +
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV 258
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
+Y+KCG I+ A +F+ ++ +N++I G +G E ++ +F ++ +SG
Sbjct: 259 LTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318
Query: 328 KPDDVTLIAVLTACSHAGL--------------------------------IEKGKEIFY 355
K TL++++ H L IE +++F
Sbjct: 319 KLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLF- 377
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM---PMEPNAVLWGSLLTACASA 412
D E ++ + ++ + L ++A + R M PN V +L+ACA
Sbjct: 378 ----DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACA-- 431
Query: 413 DDGANVELAEIAMER----LIKLEPFNDGNYV--LMSNIYAAKAQWDDAGKMRRLMKERN 466
+L +++ + L++ F YV + +YA +A ++ M ++N
Sbjct: 432 ------QLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKN 485
Query: 467 IV 468
V
Sbjct: 486 EV 487
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 24 SNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAY 83
S KS + L+ HL+ +H +K++F + T T L + L ++I
Sbjct: 316 SGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKL---NEIES 372
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-- 141
A +F++ S ++N +I GY + GL I L+ +M + P+ T +L AC
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQ 432
Query: 142 -GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
G L K VH L V+S DF S I+ T LI Y G + A+ LFD M +KN VTW
Sbjct: 433 LGALSLGKWVHDL-VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNT 491
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV-HEFVNKN 259
MI+G+ + +E + +F +M +SG+ +T + VL AC++ G + G + + +++
Sbjct: 492 MISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY 551
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSIIGGLAIH 309
+ K A + D+ + G+++ AL+ + + ++ W +++G IH
Sbjct: 552 GFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIH 602
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/487 (36%), Positives = 278/487 (57%), Gaps = 17/487 (3%)
Query: 36 LLQKCTHLVQFKQ---VHAQIIKASF-DNRTISDTQLAKLIESL-VNSSQIAYAHLVFNQ 90
LL++CT L + +Q VHA ++ + F DN + L +I ++ + A +F++
Sbjct: 93 LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLV----LQNIIVNMYAKCGCLDDARRMFDE 148
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQV 147
+ + +I G+++ + L+ QM+ GL P+ FT LLKA G L
Sbjct: 149 MPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPG 208
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+H+ +K + S ++ + L+ Y G + +AQL FD M K+ V+W A+I+GH +
Sbjct: 209 TQLHAFCLKY-GYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHAR 267
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
+ + L KM+ + T SV SACA++GA E GKWVH + K+ + L +
Sbjct: 268 KGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFI 327
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
G L DMYAK G I++A RVF +++ +V +WN+++ G A HG G+E + F QM GI
Sbjct: 328 GNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGI 387
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
+P++++ + VLTACSH+GL+++G F M++ YKVEP+V HY VDLL R LLD A
Sbjct: 388 EPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAE 446
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
IR MP+EP A +WG+LL AC N+EL A ER +L+P + G +L+SNIYA
Sbjct: 447 RFIREMPIEPTAAVWGALLGACRMHK---NMELGVYAAERAFELDPHDSGPRMLLSNIYA 503
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
+ +W D K+R++MKE + K P CS +EI + VH F+ D HP +EI E ++
Sbjct: 504 SAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISG 563
Query: 508 SLREECY 514
++E Y
Sbjct: 564 KIKEIGY 570
>gi|297833170|ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330307|gb|EFH60726.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 177/511 (34%), Positives = 292/511 (57%), Gaps = 44/511 (8%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L L++ + L + KQ+H II + ++ + L++ + + +A VF +
Sbjct: 136 LHLMKASSFLSEVKQIHCHIIVSG--CLSLGNYLWNSLVKFYMELGSLGFAEKVFAIMPQ 193
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGV 150
P +FN +I GYA+ G G ++LY +M+ +G++PD +T LL CG D+R KGV
Sbjct: 194 PDVSSFNVMIVGYAKQGFGLEALELYYKMVSDGIEPDEYTLLGLLVCCGHLSDIRLGKGV 253
Query: 151 HSLV----------------------------VKSKDFNSV----IHSLTRLITFYCNFG 178
H + + + F+++ + S ++ + G
Sbjct: 254 HGWIERRGPVYSSNLILRNALLDMYFKCKESGLAKRAFDALKKKDMRSWNTMVVGFVRLG 313
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQK-NYREGIDLFRKMRD-SGVEVNELTLVSV 236
D+++AQ +FDQM ++++V+W +++ + K+ + R +LF +M V+ + +T+VS+
Sbjct: 314 DMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQRAVRELFYEMLIVEKVKPDRVTMVSL 373
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
+S AN G G+WVH + + + + L +AL DMY KCG IE A VFK EK+V
Sbjct: 374 ISGAANNGELSHGRWVHGLMIRLQLEGDAFLSSALIDMYCKCGLIERAFMVFKTATEKDV 433
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
W S+I G A HG G++A+++F +MQ + P+ VTL+AVLTACSH+GL+E+G +FY+
Sbjct: 434 PLWTSMITGFAFHGYGQQALQLFKRMQEEDVTPNKVTLLAVLTACSHSGLVEEGLHVFYH 493
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN-MPMEPNAVLWGSLLTACASADDG 415
M+ + P +HYG LVDLLCRA L+EA ++++N MPM P+ +WGS+L+AC +G
Sbjct: 494 MKEKFGFHPETEHYGSLVDLLCRAGRLEEAKDIVQNKMPMRPSQSMWGSILSAC---REG 550
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
++E AE+A+ L+KLEP +G YVL+SNIYA +W + K R M+ R + K G S
Sbjct: 551 EDIETAELALSELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMESRGVKKTAGYSS 610
Query: 476 IEINDVVHEFMVGDGR-HPCSEEIYSMLEYV 505
+ + VH F+ + + HP EI +L+++
Sbjct: 611 VVGVEGVHSFVAAEKQNHPRWTEIKRILQHL 641
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 204/417 (48%), Gaps = 41/417 (9%)
Query: 30 SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
+H L LL+ C+ QFKQV AQI++ + T ++L ++ + A L+F
Sbjct: 33 NHQSLVLLENCSSRNQFKQVLAQIMRFNLIGVTFPMSRLI-FFSAITYPENLDLAKLLFL 91
Query: 90 QII-NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK 148
NP+ F +NT+I + + + LY+ MI + PD T+ L+KA L +VK
Sbjct: 92 DFTPNPNVFVYNTMISAVSSSK--NECFGLYSSMIRYRVSPDRQTFLHLMKASSFLSEVK 149
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
+H ++ S + + L+ FY G + A+ +F M + +V ++ MI G+ KQ
Sbjct: 150 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGSLGFAEKVFAIMPQPDVSSFNVMIVGYAKQ 209
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK-- 266
E ++L+ KM G+E +E TL+ +L C +L LGK VH ++ + + +
Sbjct: 210 GFGLEALELYYKMVSDGIEPDEYTLLGLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 269
Query: 267 LGAALTDMYAKC-------------------------------GYIEEALRVFKIVLEKN 295
L AL DMY KC G +E A VF + +++
Sbjct: 270 LRNALLDMYFKCKESGLAKRAFDALKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPQRD 329
Query: 296 VCTWNSIIGGLAIHGCGEEAVK-MFWQMQM-SGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
+ +WNS++ + GC + AV+ +F++M + +KPD VT++++++ ++ G + G+ +
Sbjct: 330 LVSWNSLLFCYSKKGCDQRAVRELFYEMLIVEKVKPDRVTMVSLISGAANNGELSHGRWV 389
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
M R ++E + L+D+ C+ L++ A+ V + E + LW S++T A
Sbjct: 390 HGLMIR-LQLEGDAFLSSALIDMYCKCGLIERAFMVFKT-ATEKDVPLWTSMITGFA 444
>gi|357498595|ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
gi|355494601|gb|AES75804.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
Length = 528
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 283/511 (55%), Gaps = 50/511 (9%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
+L K HL Q KQ+ + + +L + +N S + YAH +FN I +P+
Sbjct: 12 ILTKINHLNQLKQLQSHLTTLGHSQTHFYAFKLIRFCS--LNLSNLHYAHQIFNHIHSPN 69
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVV 155
+ F +I ++ H +L+ M+ + + P++F YP +LK+ + V VH+ +V
Sbjct: 70 IYLFTAIITAFSSQQ--HTTFKLFKTMLNSNIRPNNFIYPHVLKSVKERFLVDLVHAQIV 127
Query: 156 KSKDFN------SVIHS-------------------------LTRLITFYCNFGDVKSAQ 184
K N S++ S T L++ Y GDV+
Sbjct: 128 KCGFLNYPVVETSLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVLVSGYLRVGDVEKGL 187
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS----------GVEVNELTLV 234
++FD+M +++V W A+I+G + + EGI LFR+M + G + N++T+V
Sbjct: 188 MVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVV 247
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
VLSAC + G +LGKW+H +V ++ +++ + AL DMY KCG +E A +VF++ K
Sbjct: 248 CVLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSLELARKVFEMDQRK 307
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQM--SGIKPDDVTLIAVLTACSHAGLIEKGKE 352
+ +WNS+I A+HG E+A+ F +M G++PD+VT I +L AC+H GL+E+G
Sbjct: 308 GLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCG 367
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
F M ++Y +EP + HYGCL+DLL RA DEA +V++ M MEP+ V+WGSLL C
Sbjct: 368 YFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVH 427
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
+LAE A ++L++++P N G +++NIY +WD+ + +K++ K PG
Sbjct: 428 ---GRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPG 484
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
CS IE++D VH+F D +P +EE+Y++LE
Sbjct: 485 CSWIEVDDKVHQFFSLDQSNPKTEELYNILE 515
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 161/429 (37%), Positives = 260/429 (60%), Gaps = 9/429 (2%)
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK- 148
Q I P +N ++ G+ + G G ++ + +M G+DP++ T L ACG +R +K
Sbjct: 458 QGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKL 517
Query: 149 --GVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
+H V+++ + ++ + S LI+ Y ++ A +F +++ ++VV W ++I+
Sbjct: 518 GKEIHGYVLRNHIELSTGVGS--ALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISAC 575
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ +DL R+M S VEVN +T+VS L AC+ L A GK +H+F+ + + +
Sbjct: 576 AQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCN 635
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
+ +L DMY +CG I+++ R+F ++ ++++ +WN +I +HG G +AV +F Q +
Sbjct: 636 FILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTM 695
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G+KP+ +T +L+ACSH+GLIE+G + F M+ +Y ++P V+ Y C+VDLL RA +E
Sbjct: 696 GLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNE 755
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
E I MP EPNA +WGSLL AC N +LAE A L +LEP + GNYVLM+NI
Sbjct: 756 TLEFIEKMPFEPNAAVWGSLLGACRIH---CNPDLAEYAARYLFELEPQSSGNYVLMANI 812
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
Y+A +W+DA K+R LMKER + K PGCS IE+ +H F+VGD HP E+I + +E +
Sbjct: 813 YSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESL 872
Query: 506 AISLREECY 514
++E Y
Sbjct: 873 YFDIKEIGY 881
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 163/322 (50%), Gaps = 15/322 (4%)
Query: 103 IRGYAEAGLGHR-GIQLYTQMIGNGLD---PDSFT--YPILLKACGDLRQVK---GVHS- 152
I G++ G HR G+ M+ + +D PD Y +L+ C L ++ VH+
Sbjct: 55 ITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQ 114
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
LVV D + S RL+ YC G V+ A+ +FD+M+E+NV +WTA++ + +Y
Sbjct: 115 LVVNGVDVCEFLGS--RLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYE 172
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E I LF M + GV + V AC+ L +GK V++++ N + ++
Sbjct: 173 ETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSIL 232
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
DM+ KCG ++ A R F+ + K+V WN ++ G G ++A+K M++SG+KPD V
Sbjct: 233 DMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQV 292
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
T A+++ + +G E+ + F M +PNV + L+ + EA V R
Sbjct: 293 TWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRK 352
Query: 393 MPME---PNAVLWGSLLTACAS 411
M +E PN++ S ++AC +
Sbjct: 353 MVLEGVKPNSITIASAVSACTN 374
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 191/436 (43%), Gaps = 86/436 (19%)
Query: 61 RTISDTQLA----------KLIESLVNSSQIAYAHLVFNQI-----INPSTFAFNTVIRG 105
+ ISD +L+ +I S Q A F ++ P+ ++ +I G
Sbjct: 277 KCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG 336
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVVKSKDFNS 162
+ G + ++ +M+ G+ P+S T + AC +L R + +H +K ++ +S
Sbjct: 337 SEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDS 396
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL----- 217
+ L+ +Y V+ A+ F + + ++V+W AM+ G+ + ++ E I+L
Sbjct: 397 DLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMK 456
Query: 218 ------------------------------FRKMRDSGVEVNELTLVSVLSACANLGASE 247
F++M G++ N T+ L+AC + +
Sbjct: 457 FQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLK 516
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
LGK +H +V +N I L+ +G+AL MY+ C +E A VF + ++V WNSII A
Sbjct: 517 LGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACA 576
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR------DY 361
G A+ + +M +S ++ + VT+++ L ACS + +GKEI + R ++
Sbjct: 577 QSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNF 636
Query: 362 KVEPNVKHYG-C--------LVDLLCRARLLD------------------EAYEVIRNMP 394
+ + YG C + DL+ + L+ ++ R M
Sbjct: 637 ILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMG 696
Query: 395 MEPNAVLWGSLLTACA 410
++PN + + +LL+AC+
Sbjct: 697 LKPNHITFTNLLSACS 712
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 156/347 (44%), Gaps = 47/347 (13%)
Query: 31 HHHLP-LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL 86
H P + + C+ L + K V+ ++ F+ + +++ + ++ A
Sbjct: 190 HFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVK---GSILDMFIKCGRMDIARR 246
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
F +I F +N ++ GY G + ++ + M +G+ PD T+
Sbjct: 247 FFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW------------ 294
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-----EKNVVTWTAM 201
+I+ Y G + A F +M + NVV+WTA+
Sbjct: 295 ---------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTAL 333
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
I G + E + +FRKM GV+ N +T+ S +SAC NL G+ +H + K
Sbjct: 334 IAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEE 393
Query: 262 ILNDKL-GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ +D L G +L D YAKC +E A R F ++ + ++ +WN+++ G A+ G EEA+++
Sbjct: 394 LDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLS 453
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
+M+ GI+PD +T ++T + G + E F M ++PN
Sbjct: 454 EMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM-HSMGMDPNT 499
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 202/466 (43%), Gaps = 93/466 (19%)
Query: 33 HLPLLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
+ +LQKC L + QVHAQ++ D + + ++L+E + + A +F+
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVD---VCEFLGSRLLEVYCQTGCVEDARRMFD 148
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-- 147
++ + F++ ++ Y G I+L+ M+ G+ PD F +P + KAC +L+
Sbjct: 149 KMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRV 208
Query: 148 -KGVHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
K V+ ++ + NS + ++ + G + A+ F+++ K+V W M++G+
Sbjct: 209 GKDVYDYMLSIGFEGNSCVKG--SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGY 266
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ +++ + M+ SGV+ +++T +++S
Sbjct: 267 TSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-------------------------- 300
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIV-----LEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
YA+ G EEA + F + + NV +W ++I G +G EA+ +F
Sbjct: 301 ---------YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFR 351
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI---------------FYNMRRDY---- 361
+M + G+KP+ +T+ + ++AC++ L+ G+EI N DY
Sbjct: 352 KMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKC 411
Query: 362 -KVEPNVKHYGCL--VDLLCRARLL---------DEAYEVIRNMP---MEPNAVLWGSLL 406
VE + +G + DL+ +L +EA E++ M +EP+ + W L+
Sbjct: 412 RSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLV 471
Query: 407 TACASADDGANVELAEIAMERLIKLEPFN-DGNYVLMSNIYAAKAQ 451
T DG + A+E ++ D N +S AA Q
Sbjct: 472 TGFTQYGDG------KAALEFFQRMHSMGMDPNTTTISGALAACGQ 511
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 4/223 (1%)
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
S+L C L LG VH + N + + + LG+ L ++Y + G +E+A R+F + E+
Sbjct: 94 SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 153
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
NV +W +I+ G EE +K+F+ M G++PD V ACS GK++
Sbjct: 154 NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV- 212
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
Y+ E N G ++D+ + +D A + + + +W +++ S +
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSGYTSKGE 271
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
L I+ +L ++P ++S YA Q+++A K
Sbjct: 272 FKKA-LKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEEASK 312
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 6/126 (4%)
Query: 16 NSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL 75
N +N N+ T + LP K L Q K++H II+ D + L LI+
Sbjct: 592 NLSNVEVNTVTMVSA---LPACSKLAALRQGKEIHQFIIRCGLDT---CNFILNSLIDMY 645
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYP 135
I + +F+ + ++N +I Y G G + L+ Q GL P+ T+
Sbjct: 646 GRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFT 705
Query: 136 ILLKAC 141
LL AC
Sbjct: 706 NLLSAC 711
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 176/484 (36%), Positives = 282/484 (58%), Gaps = 18/484 (3%)
Query: 36 LLQKCTHLVQFKQ---VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L+ CT L+ F +H QIIK F + L L I A +VF+ +
Sbjct: 160 VLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVAL---YAKCGHIGVAKVVFDGLY 216
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKG 149
+ + ++ ++I GYA+ G +++++QM NG+ PD +L+A DL Q +
Sbjct: 217 HRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRS 276
Query: 150 VHSLVVKS--KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+H V+K +D +++ SLT FY G V A+ FDQM NV+ W AMI+G+ K
Sbjct: 277 IHGFVIKMGLEDEPALLISLT---AFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAK 333
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
+ E ++LF M ++ + +T+ S + A A +G+ EL +W+ ++V+K+ + +
Sbjct: 334 NGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFV 393
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
+L DMYAKCG +E A RVF +K+V W+++I G +HG G EA+ ++ M+ +G+
Sbjct: 394 NTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGV 453
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
P+DVT I +LTAC+H+GL+++G E+F+ M +D+++ P +HY C+VDLL RA L EA
Sbjct: 454 FPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEAC 512
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
I +P+EP +WG+LL+AC V L E A +L L+P+N G+YV +SN+YA
Sbjct: 513 AFIMKIPIEPGVSVWGALLSACKIY---RCVTLGEYAANKLFSLDPYNTGHYVQLSNLYA 569
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
+ WD +R LM+E+ + K+ G SVIEIN + F VGD HP ++EI+ L+ +
Sbjct: 570 SSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLER 629
Query: 508 SLRE 511
L+E
Sbjct: 630 RLKE 633
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 191/382 (50%), Gaps = 25/382 (6%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L+ TH Q+H +++ + + + KL+ N QI YA +F++ P
Sbjct: 62 LIDNSTHKRHLDQIHNRLVISGLQHNGF---LMTKLVNGSSNLGQICYARKLFDEFCYPD 118
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHS 152
F +N +IR Y+ + +++Y M G+ PD FT+P +LKAC +L +H
Sbjct: 119 VFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHG 178
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
++K F S + L+ Y G + A+++FD + + +V+WT++I+G+ +
Sbjct: 179 QIIK-YGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAV 237
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E + +F +MR++GV+ + + LVS+L A ++ E G+ +H FV K + L +LT
Sbjct: 238 EALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLT 297
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
YAKCG + A F + NV WN++I G A +G EEAV +F M IKPD V
Sbjct: 298 AFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSV 357
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG-------CLVDLLCRARLLDE 385
T+ + + A + G +E + + DY + N YG L+D+ + ++
Sbjct: 358 TVRSAVLASAQVGSLELAQWM-----DDYVSKSN---YGSDIFVNTSLIDMYAKCGSVEF 409
Query: 386 AYEVI-RNMPMEPNAVLWGSLL 406
A V RN + + V+W +++
Sbjct: 410 ARRVFDRN--SDKDVVMWSAMI 429
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 186/504 (36%), Positives = 290/504 (57%), Gaps = 44/504 (8%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL----VNSSQIAYAHLVFNQI 91
L QK + Q KQ+ + + + T+ D A I SL S + YA +F +
Sbjct: 17 LDQKGLTISQLKQIQSHLTVTA----TLKDPYAAAKIISLHAHSNARSSLFYAERLFLCL 72
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK--- 148
N STF +NT+++ + E R LY M+ + P++FT+ +++AC D+ ++
Sbjct: 73 QNKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFNLQMGL 132
Query: 149 GVHSLVVK----SKDF--NSVIH------------------------SLTRLITFYCNFG 178
H VVK S DF N +IH + T LI+ Y N G
Sbjct: 133 CFHGQVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCLISGYLNSG 192
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
V A+ LFD+M EKN V+W A+I G+V+ ++E +++F M+ SG +N ++V L+
Sbjct: 193 QVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALT 252
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
ACA LGA + G+W+H +V ++ + L+ LG AL DMYAKCG IE A VF + +++V
Sbjct: 253 ACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDRDVYA 312
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
+ +I GLA H E A+ +F +MQ G+ P++VT + VL ACS G++++G IF +M
Sbjct: 313 FTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMS 372
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
Y +EP ++HYGCLVDLL RA ++EA +V+R MP++P++ G+LL AC D V
Sbjct: 373 NRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHGD---V 429
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
+L E ++ L++ + G +VL+SN+YA+ +W+DA K+R+ M+++NI K PGCS IE+
Sbjct: 430 QLGEEMVDSLVQRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRKLPGCSSIEV 489
Query: 479 NDVVHEFMVGDGRHPCSEEIYSML 502
N V EF+ GD + E+I +L
Sbjct: 490 NGTVCEFVTGDRSYALEEDIMFLL 513
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 182/507 (35%), Positives = 282/507 (55%), Gaps = 18/507 (3%)
Query: 12 THFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIK-ASFDNRTISDTQLAK 70
+H N SH A KS LP L Q+HA+ +K S N + L
Sbjct: 67 SHLPNP--SHLTFPFAIKSASRLP-----DPLTAGAQLHARSLKLPSHSNPHV----LTS 115
Query: 71 LIESLVNSSQIAYAHLVFNQIINP-STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP 129
L+ ++ A F+++ P ST ++ +I Y +AG G I + +G+ P
Sbjct: 116 LLNLYARCGRLHDAQKAFDEMRQPPSTVSWTALITAYMDAGRGLEAIGVARSAFASGVRP 175
Query: 130 DSFTYPILLKACGDLRQ-VKGVHSLVVKSKD-FNSVIHSLTRLITFYCNFGDVKSAQLLF 187
DSFT +L AC + V G K+ + T + Y G++ A+ +F
Sbjct: 176 DSFTAVRVLTACARVADLVTGEEVWTAAEKEGIAGNVFVATAAVDLYVKCGEMDKARGVF 235
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
D+M K+VV W AM+ G+ + RE ++LF M+ G+ + T+ LSAC LGA +
Sbjct: 236 DKMKNKDVVAWGAMVGGYASNGHPREALELFFAMQVEGMRPDCYTVAGALSACTRLGALD 295
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
LG+ V + + ++ N LG AL DMYAKCG EA VF+ + +++ WN++I GL
Sbjct: 296 LGRRVVGMLQWDEVLGNPVLGTALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNAMILGLG 355
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
+ G + A + QM+ SG+ +D T I +L +C+H GL++ G+ F NM + Y + P +
Sbjct: 356 MTGHEKIAFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQLYHIRPRI 415
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+HYG +VDLL RA LL EA+++I++MPME NAV+WG+LL C N +LAE +++
Sbjct: 416 EHYGIMVDLLSRAGLLQEAHQLIQDMPMEANAVVWGALLGGCKIHR---NADLAEHVLKQ 472
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
LI+LEP+N GNYV++SNIY+ +W+DA K+R MK + + K P S +E++ VHEF V
Sbjct: 473 LIQLEPWNSGNYVVLSNIYSNSGRWEDAAKLRLEMKAKGVEKVPASSWVELDGKVHEFHV 532
Query: 488 GDGRHPCSEEIYSMLEYVAISLREECY 514
GD HP S++IY+ L+ + + ++ Y
Sbjct: 533 GDKSHPLSDQIYAKLDELGMEMKAMGY 559
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 166/427 (38%), Positives = 253/427 (59%), Gaps = 38/427 (8%)
Query: 122 MIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG 178
M+G G+ P+ FT ++KAC L Q K H+ ++K F S + T L+ Y G
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIK-MGFESDVVVQTALVHMYARCG 59
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR-------------------------- 212
++ A +FD+M+E++ TW AMI GH + ++ +
Sbjct: 60 SLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQ 119
Query: 213 -----EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
E +++F +MR +G++ + + SVLSACA+L A ELG+ H +V ++ L+ +
Sbjct: 120 NGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVV 179
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
G+AL DMYAK G +E+A +VF + ++N +WNSII G A HG G +AV +F QM +GI
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGI 239
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
KP++++ + VL+ACSH GL+ +G+ F M ++Y + P+V HY C++DLL RA LDEA
Sbjct: 240 KPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAE 299
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
I MP+EP+ +WG+LL AC N ELA+ E L+ +E G YVL+SNIYA
Sbjct: 300 NFINGMPVEPDVSVWGALLGACRIH---GNTELAKRIAEHLLGMEVQIAGIYVLLSNIYA 356
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
A QWDDA K+R+LMK+R ++K PG S IE+ ++H F+ G+ HP +EI+ LE ++
Sbjct: 357 AAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSR 416
Query: 508 SLREECY 514
++ Y
Sbjct: 417 KMKAAGY 423
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 146/323 (45%), Gaps = 39/323 (12%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLA----------------------------KLIES 74
L Q KQ H IIK F++ + T L +I
Sbjct: 26 LEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITG 85
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
+ + A +F ++ ++ VI GYA+ G G + ++ QM G+ D F
Sbjct: 86 HAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIM 145
Query: 135 PILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
+L AC DL + + H+ VV+S F I + L+ Y G ++ A +FD+M
Sbjct: 146 GSVLSACADLAALELGRQFHAYVVQS-GFALDIVVGSALVDMYAKSGSMEDACQVFDKMP 204
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
++N V+W ++I G + + + LF +M +G++ NE++ V VLSAC++ G G+
Sbjct: 205 QRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRG 264
Query: 252 VHEFVNKNCIILND-KLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIH 309
+ +N I+ D + D+ + G ++EA + +E +V W +++G IH
Sbjct: 265 YFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIH 324
Query: 310 GCGEEAVK-----MFWQMQMSGI 327
G E A + + ++Q++GI
Sbjct: 325 GNTELAKRIAEHLLGMEVQIAGI 347
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 82/174 (47%), Gaps = 10/174 (5%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L C L +Q HA ++++ F + + L++ S + A VF+++
Sbjct: 148 VLSACADLAALELGRQFHAYVVQSGFALDIVVGS---ALVDMYAKSGSMEDACQVFDKMP 204
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKG 149
+ ++N++I G A+ G G+ + L+ QM+ G+ P+ ++ +L AC G + + +G
Sbjct: 205 QRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRG 264
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM-TEKNVVTWTAMI 202
+L+ ++ + T +I G + A+ + M E +V W A++
Sbjct: 265 YFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALL 318
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 271/433 (62%), Gaps = 13/433 (3%)
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRG---IQLYTQMIGNGLD-PDSFTYPIL 137
+YA +F+QI P+ F +N++IR + A + +Y +M+ G P+SFT
Sbjct: 78 SYARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAADTVLVYRRMLRAGSPLPNSFTLAFA 137
Query: 138 LKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EK 193
LKAC L + + +HS + + + T L+ Y +V A+ +FD M +K
Sbjct: 138 LKACSVVPALGEGRQLHSQAFR-RGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDK 196
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
N+ W+AMI G+ + E + LFR+M+ + V +E+T+VSV+SACA GA +LG+WVH
Sbjct: 197 NLAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVH 256
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
F+++ I ++ +L AL DMYAKCG IE A VF + E++ W+++I GLAIHG E
Sbjct: 257 AFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVE 316
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
A+K+F +M ++P++VT I VL+AC+H+GL+ +G+ +++ ++ ++P++++YGC+
Sbjct: 317 VALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRR-YWSTMQELGIKPSMENYGCM 375
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
VDL CR+ LLDEAY + M + PN+V+W +LL A +++ ++ + A ++L++LEP
Sbjct: 376 VDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSN---RFDIVQSASKKLLELEP 432
Query: 434 FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHP 493
N NYVL+SN+YA+ +QWD MR+ MKE N+ GCS IEIN +H+F+V D HP
Sbjct: 433 CNPENYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCSSIEINGYLHKFVVSDDSHP 492
Query: 494 CSEEIYSMLEYVA 506
+EI +L +A
Sbjct: 493 EIKEIRLLLREIA 505
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 168/471 (35%), Positives = 276/471 (58%), Gaps = 15/471 (3%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
L + VH+ ++K +I DT + LI++ + A VF ++ T ++N+
Sbjct: 169 LTPLRAVHSHVVKLG----SIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNS 224
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFN 161
+ G +++ +M D D+ ++ +L +++ L + N
Sbjct: 225 AMAAMVRQGEVASARRMFDEMP----DKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERN 280
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
V S + +++ YC GD++ A+++FD+M KN+VTWT M++ + E LF +M
Sbjct: 281 VV--SWSTVVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQM 338
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
+++ VE++ +VS+L+ACA G+ LGK +H +V + + + A+ DM+ KCG +
Sbjct: 339 KEAAVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCV 398
Query: 282 EEALRVFKI-VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
A VF + EK+ +WN+IIGG A+HG G++A+ F QM++ G +PD VT+I VL+A
Sbjct: 399 NRADYVFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSA 458
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
C+H G +E+G++ F NM RDY + P ++HYGC++DLL R L++EA +I++MP +PN V
Sbjct: 459 CTHMGFVEEGRQHFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEV 518
Query: 401 LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRR 460
+WGSLL+AC NVE AEIA+ L KL+P N GNY ++SNIYA QW D K R
Sbjct: 519 IWGSLLSACRLHK---NVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARM 575
Query: 461 LMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
MK K+ G S IE+++ HEF VGD +H S++I M++ ++ +++
Sbjct: 576 QMKGTGSQKSAGSSWIELDEAFHEFTVGDRKHSDSDQISEMVDRLSSHVKD 626
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 273/466 (58%), Gaps = 15/466 (3%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
+ + VH+ ++K +I DT + LI++ + + A VF ++ ++N+
Sbjct: 135 VAPLRAVHSHVVKLG----SIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNS 190
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFN 161
+ G +++ +M L+ D+ ++ LL V+ L + N
Sbjct: 191 AMAAMVRQGEVEGARRMFDEM----LEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERN 246
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
V S + +++ YC GD++ A+++FD+M KN+VTWT M++ + E LF +M
Sbjct: 247 VV--SWSTVVSGYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQM 304
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
+++ VE++ +VS+L+ACA G+ LGK +H +V + + + AL DM+ KCG I
Sbjct: 305 KEASVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCI 364
Query: 282 EEALRVFKI-VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
A VF ++EK+ +WN+IIGG A+HG G++A+ F QM++ G PD VT+I VL+A
Sbjct: 365 NRADYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSA 424
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
C+H G +E+G+ F NM RDY V P ++HYGC++DLL R L+ EA ++I++MP +PN V
Sbjct: 425 CTHMGFVEEGRRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEV 484
Query: 401 LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRR 460
+WGSLL+AC NVE AEIA+ L KL+P N GNY ++S+IYA +W D K R
Sbjct: 485 IWGSLLSACRLHK---NVEYAEIAVNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARM 541
Query: 461 LMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
MK K+ G S IE+++ HEF VGD +HP S++I M++ ++
Sbjct: 542 QMKGTGSQKSSGSSWIELDEAFHEFTVGDRKHPDSDQISEMVDRLS 587
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 164/426 (38%), Positives = 260/426 (61%), Gaps = 16/426 (3%)
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSL 153
P F++NT+I+ + G I L++ M N + D FT+P++LK + L
Sbjct: 51 PDPFSYNTIIKHVSPTG----AISLFSHMHRNSVPFDHFTFPLILKHHHHHLLHSLIFKL 106
Query: 154 VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYRE 213
F++ I LI Y + G + A LFD+M +++V+W+ +I+ VK E
Sbjct: 107 -----GFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAE 161
Query: 214 GIDLFRKM----RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ +F++M RD ++ ++SV+SA ++LG ELG WVH F+ + I++ LG
Sbjct: 162 ALSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGT 221
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL +MY++CG I+ +++VF + E+NV TW ++I GLA+HG EA+K+F++M+ SG+KP
Sbjct: 222 ALINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKP 281
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D I VL ACSH GL+E G +F +MR ++ ++P ++HYGC+VDLL RA L+ EA++
Sbjct: 282 DGALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDF 341
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
+ MP++PN+V+W +LL AC + + ++ LAE A ER+I+L+P++DG+YVL+SN Y
Sbjct: 342 VEEMPLKPNSVIWRTLLGACVNHN---HLGLAEKARERIIELDPYHDGDYVLLSNAYGRV 398
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
W +R MK+ IVK PG S + I+ VVHEF+ GD HP EEI L + ++
Sbjct: 399 GNWGGKAGLRNSMKQNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASIIDTV 458
Query: 510 REECYA 515
+ Y
Sbjct: 459 KLGGYT 464
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 175/515 (33%), Positives = 294/515 (57%), Gaps = 46/515 (8%)
Query: 34 LPLLQ---KCTHLVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFN 89
LP+L+ K + L + ++H +F T+ D + ++ + +I YA VF+
Sbjct: 115 LPILKAVSKVSALFEGMELHG----VAFKIATLCDPFVETGFMDMYASCGRINYARNVFD 170
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQ 146
++ + +NT+I Y GL +L+ +M + + PD ++ ACG ++R
Sbjct: 171 EMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRY 230
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYC------------------------------- 175
+ ++ ++++ D H LT L+T Y
Sbjct: 231 NRAIYEFLIEN-DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYS 289
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
G + AQ++FDQ +K++V WT MI+ +V+ +E + +F +M SG++ + +++ S
Sbjct: 290 KCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFS 349
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
V+SACANLG + KWVH ++ N + + AL +MYAKCG ++ VF+ + +N
Sbjct: 350 VISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRN 409
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
V +W+S+I L++HG +A+ +F +M+ ++P++VT + VL CSH+GL+E+GK+IF
Sbjct: 410 VVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 469
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+M +Y + P ++HYGC+VDL RA LL EA EVI +MP+ N V+WGSL++AC +
Sbjct: 470 SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE- 528
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
+EL + A +R+++LEP +DG VLMSNIYA + +W+D +RR+M+E+N+ K G S
Sbjct: 529 --LELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSR 586
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
I+ N HEF++GD RH S EIY+ L+ V L+
Sbjct: 587 IDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLK 621
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 194/421 (46%), Gaps = 47/421 (11%)
Query: 26 TATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLI---ESLVNSSQIA 82
+T ++ L L C L KQ+HA I+ RT+ + +L + +S ++
Sbjct: 8 ASTAANTILEKLSFCKSLNHIKQLHAHIL------RTVINHKLNSFLFNLSVSSSSINLS 61
Query: 83 YAHLVFNQIINP-STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
YA VF+ I +P + FN +R + + I Y ++ G D F++ +LKA
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 142 GD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
L + +H + K T + Y + G + A+ +FD+M+ ++VVTW
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVE-TGFMDMYASCGRINYARNVFDEMSHRDVVTW 180
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
MI + + E LF +M+DS V +E+ L +++SAC G + ++EF+ +
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 259 NCIILNDKLGAALTDMYA-------------------------------KCGYIEEALRV 287
N + ++ L AL MYA KCG +++A +
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
F +K++ W ++I +EA+++F +M SGIKPD V++ +V++AC++ G++
Sbjct: 301 FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGIL 360
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
+K K + + + +E + L+++ + LD +V MP N V W S++
Sbjct: 361 DKAKWVHSCIHVN-GLESELSINNALINMYAKCGGLDATRDVFEKMPRR-NVVSWSSMIN 418
Query: 408 A 408
A
Sbjct: 419 A 419
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 181/506 (35%), Positives = 295/506 (58%), Gaps = 14/506 (2%)
Query: 22 KNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASF-DNRTISDTQLAKLIESLVNSSQ 80
K+ ++++ H L L+ T + +Q+HA +++ S N + L++L SL+
Sbjct: 3 KSISSSSGDDHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLI-PRD 61
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLK 139
I Y+ VF+Q +NP+ NT+IR ++ + G +L+ + N L + + LK
Sbjct: 62 INYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALK 121
Query: 140 AC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVV 196
C GDL +H + S F S +T L+ Y + A +FD++ +++ V
Sbjct: 122 CCIKSGDLLGGLQIHGKIF-SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTV 180
Query: 197 TWTAMINGHVKQKNYREGIDLFRKMR---DSGVEVNELTLVSVLSACANLGASELGKWVH 253
+W + + +++ K R+ + LF KM+ D V+ + +T + L ACANLGA + GK VH
Sbjct: 181 SWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVH 240
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
+F+++N + L L MY++CG +++A +VF + E+NV +W ++I GLA++G G+
Sbjct: 241 DFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGK 300
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR-DYKVEPNVKHYGC 372
EA++ F +M GI P++ TL +L+ACSH+GL+ +G F MR ++K++PN+ HYGC
Sbjct: 301 EAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGC 360
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLE 432
+VDLL RARLLD+AY +I++M M+P++ +W +LL AC D VEL E + LI+L+
Sbjct: 361 VVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGD---VELGERVISHLIELK 417
Query: 433 PFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRH 492
G+YVL+ N Y+ +W+ ++R LMKE+ I PGCS IE+ VHEF+V D H
Sbjct: 418 AEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSH 477
Query: 493 PCSEEIYSMLEYVAISLREECYAARM 518
P EEIY ML + L+ Y A +
Sbjct: 478 PRKEEIYKMLAEINQQLKIAGYVAEI 503
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 277/496 (55%), Gaps = 38/496 (7%)
Query: 55 KASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
+ +FD+ + D +I L + A + + ++ +I GY+ AG
Sbjct: 160 RRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAA 219
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLV---------------- 154
+ + M+ +G++PD T LL AC L+ + + +H LV
Sbjct: 220 EAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALI 279
Query: 155 ---VKSKDFN---SVIHSLTR---------LITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
K D V +L R +I YC G V A+ LFDQM ++++VT+
Sbjct: 280 DMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFN 339
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
++I G++ RE + LF +MR + + T+VS+L+ACA+LGA G+ +H + +
Sbjct: 340 SLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQR 399
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ ++ LG AL DMY KCG +EEA VF+ + ++V TW+++I GLA +G G+ A++ F
Sbjct: 400 LVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYF 459
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
+ M++ G +P+ VT IA+LTACSH+ L+++G+ F MR + + P ++HYGC++DLL R
Sbjct: 460 FWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGR 519
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
+ LLDEA +++R MPM+PNAV+W S+L+AC D LA A E L+KLEP D Y
Sbjct: 520 SGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDA---NLARNAAEHLLKLEPDEDAVY 576
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
V + NIY QW+DA ++RRLM+ER + K G S I + VH+F+V D HP EI
Sbjct: 577 VQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEIT 636
Query: 500 SMLEYVAISLREECYA 515
+M+E + L+ Y+
Sbjct: 637 AMMEEITRRLKSVGYS 652
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 196/440 (44%), Gaps = 80/440 (18%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVN------SSQIAYAHLVFNQIINPSTFA 98
Q ++HA ++ + R + + L+ SLVN + YA +F+++ STF
Sbjct: 14 QAAELHAVLVAS---GRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRM-PCSTFL 69
Query: 99 FNTVIRGYAEAGLGHRG-IQLYTQMIGNGLDPDSFTYPILLKACGDLRQ----VKGVHSL 153
F+T +R A G + LY +M G+ D+FT+ L K C R + +H+
Sbjct: 70 FDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAA 129
Query: 154 VVKSK-------DFNSVIH------------------------SLTRLITFYCNFGDVKS 182
++ N +IH + T +I+ G +
Sbjct: 130 CFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDD 189
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A L +NV++WT +I+G+ + E +D F M G+E +E+T++ +LSACA
Sbjct: 190 AWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQ 249
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV----------- 291
L G+ +H+ V + ++++ KL AL DMYAKCG I A VF +
Sbjct: 250 LKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNA 309
Query: 292 ---------------------LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
++++ T+NS+I G G EA+ +F QM+ ++ D
Sbjct: 310 MIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRAD 369
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+ T++++LTAC+ G + +G+ + + + VE ++ L+D+ + ++EA V
Sbjct: 370 NFTMVSLLTACASLGALPQGRALHACIEQRL-VEVDIYLGTALLDMYLKCGRVEEASLVF 428
Query: 391 RNMPMEPNAVLWGSLLTACA 410
+ M + + W +++ A
Sbjct: 429 QAMSVR-DVHTWSAMIAGLA 447
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 97/248 (39%), Gaps = 38/248 (15%)
Query: 144 LRQVKGVHSLVVKSKDF---NSVIHSLTRLITFYCNFGDV--KSAQLLFDQMTEKNVVTW 198
+RQ +H+++V S S H L L+ + + + A LFD+M +
Sbjct: 12 VRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTFLFD 71
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL-GKWVHEFVN 257
TA+ + L+R+MR +GV + T + CA A L + +H
Sbjct: 72 TALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACF 131
Query: 258 KNCIILNDKLGA-ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC----- 311
+ + L + + MY + G +A R F + K+ W ++I GLA G
Sbjct: 132 RTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAW 191
Query: 312 --------------------------GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
EAV F M GI+PD+VT+I +L+AC+
Sbjct: 192 CLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLK 251
Query: 346 LIEKGKEI 353
+ G+ +
Sbjct: 252 DLVFGRSL 259
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 176/516 (34%), Positives = 290/516 (56%), Gaps = 43/516 (8%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQII 92
L + K + L + ++H K + T+SD + L++ +I YA VF+++
Sbjct: 121 LKAVSKVSALFEGMELHGFAFKIA----TLSDPFVETGLMDMYAACGRINYARNVFDEMS 176
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKG 149
+NT+I Y GL +L+ +M + + PD ++ ACG ++R +
Sbjct: 177 QRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRA 236
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYC-------------------------------NFG 178
++ ++++ D H LT L+T Y G
Sbjct: 237 IYDFLIEN-DVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAG 295
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
+ A+++FDQ K++V WT MI+ + + + +E + +F +M SG++ + +T++SV+S
Sbjct: 296 RLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVIS 355
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
AC NLG + KWVH + + N + + AL +MYAKCG ++ A VF+ + +NV +
Sbjct: 356 ACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVS 415
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
W+S+I A+HG +++ +F QM+ ++P++VT + VL CSH+GL+E+GK+IF +M
Sbjct: 416 WSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMT 475
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
+Y + P ++HYGC+VDL RA LL EA EVI +MPM PN V+WGSL++AC + +
Sbjct: 476 DEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGE---L 532
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
EL E+A +R++KLEP +DG VLMSNIYA + +WD +R +M+++ + K G S I++
Sbjct: 533 ELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDL 592
Query: 479 NDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
N HEF++GD RH S EIY+ L V L+ Y
Sbjct: 593 NGKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGY 628
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 200/435 (45%), Gaps = 42/435 (9%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L L C L KQ+HA I++ +++ S +S ++YA +F+ I
Sbjct: 19 LEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLS---FSSSSINLSYALNLFSSISP 75
Query: 94 -PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKG 149
P + FN+++R + +G I Y ++ G D ++P +LKA L +
Sbjct: 76 LPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGME 135
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H K + T L+ Y G + A+ +FD+M++++VVTW MI + +
Sbjct: 136 LHGFAFKIATLSDPFVE-TGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFG 194
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E LF +M+DS V +E+ L +++SAC G + +++F+ +N + ++ L
Sbjct: 195 LLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLT 254
Query: 270 ALTDMYA-------------------------------KCGYIEEALRVFKIVLEKNVCT 298
AL MYA K G +++A +F K++
Sbjct: 255 ALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVC 314
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
W ++I A +EA+++F +M SGIKPD VT+++V++AC + G ++K K + +
Sbjct: 315 WTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWV-HRYT 373
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
+E + L+++ + LD A +V MP N V W S++ A A + ++
Sbjct: 374 HLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTR-NVVSWSSMINAFAMHGEASD- 431
Query: 419 ELAEIAMERLIKLEP 433
L+ A + +EP
Sbjct: 432 SLSLFAQMKQENVEP 446
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 184/471 (39%), Positives = 268/471 (56%), Gaps = 19/471 (4%)
Query: 20 SHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSS 79
S KN+ + L C+ L KQ+HA+I F++ I K+I S
Sbjct: 2 SPKNTTLWKTEQTLMNLFNHCSTLNHLKQIHARIFLTGFNHNLILS---GKIIMFCAVSQ 58
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGL-GHRGIQLYTQMIGNGLDPDSFTYPILL 138
+ YA VF++I P +F +NT+IRG+ + H I + +M PD+FT+ +L
Sbjct: 59 NMNYALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRM-QLAHRPDNFTFSFIL 117
Query: 139 KACGDLRQVKGVHSLVVKSKDFNSVIHSLTR--LITFYCNFGDVKSAQLLFDQMTEKNVV 196
K LR V L F H+ R LI Y D++ A LF++M + N+V
Sbjct: 118 KIIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLV 177
Query: 197 TWTAMINGHVKQKNYREGIDLFRKM---RDSGVEV--NELTLVSVLSACANLGASELGKW 251
+W ++I+ HV Y E IDLF KM + +G+E+ + TLV LSAC +G+ + G+
Sbjct: 178 SWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRK 237
Query: 252 VHEFVNKNCIILNDKLGA--ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
VH FV + + AL DMYAKCG +EEA F + KNV +WN +I G A H
Sbjct: 238 VHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASH 297
Query: 310 GCGEEAVKMFWQMQMSGI-KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
G GEEA+ +F +M + +PD++T + VL ACSH GL+++G+ F M RDY ++P +K
Sbjct: 298 GNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIK 357
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HYGC+VDLL RA L EAYE+I++MP+E NA++W +LL AC + NVEL E + L
Sbjct: 358 HYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRTLLAACRNY---GNVELGEKVRKHL 414
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK-NPGCSVIEI 478
++LEP + +YVL++N+YA+ QW++ K RR M+ER + K PG S I I
Sbjct: 415 MELEPDHSSDYVLLANMYASTGQWNEMSKERRSMQERRVRKPEPGNSFIGI 465
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 293/533 (54%), Gaps = 71/533 (13%)
Query: 26 TATKSHHHLPLL---QKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
+A S +P+L ++ L++ +Q HA ++K + T S ++L + ++
Sbjct: 2 SACSSTTPVPILSFTERAKSLLEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVS 61
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG 142
YAH + N+I +P+ F N+VIR YA + + ++ +M+ + PD +++ +LKAC
Sbjct: 62 YAHSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACA 121
Query: 143 ---DLRQVKGVHSLVVKSKDF------NSVIHSLTR------------------------ 169
+ + +H L +KS N++I+ R
Sbjct: 122 AFCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNS 181
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH-----VKQKN-------------- 210
L++ Y + G V+ A+ LFD+M E+NV +W MI+G+ VK+
Sbjct: 182 LLSAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSW 241
Query: 211 ------------YREGIDLFRKMRDSGVE-VNELTLVSVLSACANLGASELGKWVHEFVN 257
Y E +++F M D E + TLV+VLSACA+LG+ G+WVH +++
Sbjct: 242 NAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYID 301
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
K+ I + + AL DMY+KCG I++AL VF+ +++V TWNSII GL++HG G++A++
Sbjct: 302 KHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALE 361
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL 377
+F +M G KP+ +T I VL+AC+H GL+++ +++F M Y +EP ++HYGC+VDLL
Sbjct: 362 IFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLL 421
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDG 437
R +EA E++ +P + ++L SLL AC +E AE RL++ P
Sbjct: 422 GRMGKFEEAEELVNEVPADEASILLESLLGACKRF---GKLEQAERIANRLLESNPRESS 478
Query: 438 NYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
YV MSN+YA+ +WD+A ++R M+ + KNPGCS+IE++ VVHEF+ G+G
Sbjct: 479 GYVQMSNLYASHGRWDEAMEVRGKMRAERVKKNPGCSMIEVDGVVHEFLAGEG 531
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 172/471 (36%), Positives = 276/471 (58%), Gaps = 35/471 (7%)
Query: 46 FKQVHAQIIKASFD-NRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
KQ+HA++I+ F+ NR + + K+I + + YA VF +I +P F FNT+
Sbjct: 4 LKQIHARVIQLGFEQNRFV----VGKVIVFCAAAEHGDMNYAVSVFEKIGDPDAFIFNTM 59
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKD 159
IRG+ +A + Y +M GL DSFT+ LLK CG L V + +H +K +
Sbjct: 60 IRGFGKANDPRKAFDYYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMHCSTLK-RG 118
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
NS + L+ Y F D+++++ LF+++ +V W +I+ HV + E +++F
Sbjct: 119 LNSHVFVRNTLVHMYGTFKDIEASRQLFEEIPNPELVAWNIIIDCHVSCGKFNEALEMFS 178
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK---NCIILNDKLGAALTDMYA 276
+M G+E +E T V +LSAC+ LGA + G+WVH ++ CI ++ +L DMYA
Sbjct: 179 RMLKFGIEPDEATFVVILSACSALGALDFGRWVHSCISNIGHGCIT---EVNNSLLDMYA 235
Query: 277 KCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI-KPDDVTLI 335
KCG ++EA +F + +KN TWN++I GLA HG EA+ +F M + PDD+T +
Sbjct: 236 KCGALQEAFEIFNGMNKKNTVTWNTMILGLASHGYANEALALFSNMLEQKLWAPDDITFL 295
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
VL+ACSH G+++KG F M+++Y ++P +KHYGC+VD+L RA ++EAY +I NMPM
Sbjct: 296 VVLSACSHGGMVDKGWRFFDIMKKEYHIQPTIKHYGCMVDILGRAGFVEEAYRLISNMPM 355
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
+ NA++W +LL AC NVEL + ++L++LEP + +YVL++N YA+ +W++A
Sbjct: 356 QCNAIVWRTLLAACRLH---GNVELGKQVRKQLLELEPDHSSDYVLLANTYASAGRWNEA 412
Query: 456 GKMRRLMKERNIVK-NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
++R+ M +R + K PG SV+ GRHP +L ++
Sbjct: 413 MRVRKTMHKRGVQKPEPGNSVV-------------GRHPSLRSDEPLLSFL 450
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 173/478 (36%), Positives = 265/478 (55%), Gaps = 40/478 (8%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP- 129
L+ V +I A F+ + ++NT+I GYA+ G QL+ + P
Sbjct: 220 LLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE------SPV 273
Query: 130 -DSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSV------------------------- 163
D FT+ ++ R V+ L + + N V
Sbjct: 274 HDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVM 333
Query: 164 ----IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
+ + +IT Y G + A+ LFD+M +++ V+W AMI G+ + + E + LF
Sbjct: 334 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFV 393
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
M G +N + S LS CA++ A ELGK +H + K +G AL MY KCG
Sbjct: 394 LMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 453
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
IEEA +FK + K++ +WN++I G + HG GEEA++ F M+ G+KPDD T++AVL+
Sbjct: 454 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLS 513
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSH GL++KG++ F+ M +DY V PN +HY C+VDLL RA LL+EA+ +++NMP EP+A
Sbjct: 514 ACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDA 573
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
+WG+LL A N ELAE A +++ +EP N G YVL+SN+YA+ +W D GK+R
Sbjct: 574 AIWGTLLGASRVH---GNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLR 630
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
M+++ + K PG S IEI + H F VGD HP +EI++ LE + + +++ Y ++
Sbjct: 631 VRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSK 688
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 169/374 (45%), Gaps = 57/374 (15%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM------IG 124
+I+ V + + A +F ++ ++NT++ GYA+ G +++ +M
Sbjct: 127 MIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSW 186
Query: 125 NGLDPDSFTYPILLKAC-------------------GDLRQVKGVHSLVVKSKDFNSV-- 163
N L L +AC G +++ K +V + F+S+
Sbjct: 187 NALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKK----IVEARQFFDSMKV 242
Query: 164 --IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
+ S +IT Y G++ A+ LFD+ +V TWTAM++G+++ + E +LF +M
Sbjct: 243 RDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM 302
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN-KNCIILNDKLGAALTDMYAKCGY 280
E NE++ ++L+ E+ K + + + +N N + YA+CG
Sbjct: 303 ----PERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWN-----TMITGYAQCGK 353
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
I EA +F + +++ +W ++I G + G EA+++F M+ G + + + + L+
Sbjct: 354 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALST 413
Query: 341 CSHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLVD-----LLCRARLLDEAYEVIRNMP 394
C+ +E GK++ + + Y+ GC V + C+ ++EA ++ + M
Sbjct: 414 CADVVALELGKQLHGRLVKGGYET-------GCFVGNALLLMYCKCGSIEEANDLFKEMA 466
Query: 395 MEPNAVLWGSLLTA 408
+ + V W +++
Sbjct: 467 GK-DIVSWNTMIAG 479
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 21/257 (8%)
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
S +I+ Y G+ + A++LFD+M E+++V+W MI G+V+ +N + +LF +M +
Sbjct: 92 SYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERD 151
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
V + ++LS A G + + V + + + ND AL Y + +EEA
Sbjct: 152 V----CSWNTILSGYAQNGCVDDARRVFDRMPEK----NDVSWNALLSAYVQNSKLEEAC 203
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
+F + +WN ++GG EA + F M++ D V+ ++T + G
Sbjct: 204 VLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVR----DVVSWNTIITGYAQNG 259
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
I++ +++F D +V + +V + R+++EA E+ MP E N V W ++
Sbjct: 260 EIDEARQLF-----DESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMP-ERNEVSWNAM 313
Query: 406 LTACASADDGANVELAE 422
L A G VE+A+
Sbjct: 314 L---AGYVQGERVEMAK 327
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y + G EALRVFK + + ++N++I G +G E A +F +M + D V+
Sbjct: 69 YMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMP----ERDLVSW 124
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
++ + K +E+F M E +V + ++ + +D+A V MP
Sbjct: 125 NVMIKGYVRNRNLGKARELFERM-----PERDVCSWNTILSGYAQNGCVDDARRVFDRMP 179
Query: 395 MEPNAVLWGSLLTA 408
E N V W +LL+A
Sbjct: 180 -EKNDVSWNALLSA 192
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 176/507 (34%), Positives = 286/507 (56%), Gaps = 40/507 (7%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+ LL+ C + +FKQ+ A I + ++L ++ + I +++ +F QI +
Sbjct: 16 IALLENCRSMSEFKQIQAFFITSGLSQHHPFASRLLSF-SAISSWGDIDHSYRIFLQIPS 74
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GV 150
P+ +N++IRG+++ + + ++ +M+ G+ PD TYP + KA L +++ V
Sbjct: 75 PTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFIAKAVARLSELRLALAV 134
Query: 151 HSLVVKSKDF------NSVIH------------------------SLTRLITFYCNFGDV 180
H + K + NS+IH S ++ Y GD+
Sbjct: 135 HCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGYAKCGDL 194
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
SA+ +F+ M +++VV+W++MI+G VK Y + +F +MR G + NE+T+VSVL AC
Sbjct: 195 DSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANEVTMVSVLCAC 254
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL--EKNVCT 298
A+LGA E G+ +H+++ N + L +L DMYAKCG IEEA+ VF+ V + +V
Sbjct: 255 AHLGALEQGRTMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVLM 314
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
WN+IIGGLA HG E++++F +MQ+ GI PD++T + + +AC+H GL+ + F ++
Sbjct: 315 WNTIIGGLATHGLVHESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSLG 374
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
+ V P +HY C+VD+L RA L EAY+ I MPMEP A + G+LL C +
Sbjct: 375 KQGMV-PKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCM---NHRRF 430
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
+LAE +LI+LEP +DG Y+ +SN+YA WD+A MR M+ R + K+PG S +E+
Sbjct: 431 DLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSFVEV 490
Query: 479 NDVVHEFMVGDGRHPCSEEIYSMLEYV 505
+H F+ D H E+IY ML +
Sbjct: 491 LGTLHRFIAHDKTHNDLEKIYMMLNTI 517
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 176/474 (37%), Positives = 276/474 (58%), Gaps = 13/474 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESL-VNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
++VHA ++ + D + I S+ + A +VF++++ ++NT++ G
Sbjct: 144 RKVHALVVVGGLEE----DVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSG 199
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNS 162
+ + G +++ M +G D T LL ACGD L+ K +H VV++ +
Sbjct: 200 FVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGR 259
Query: 163 VIHS--LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
V + + +I YCN V A+ LF+ + K+VV+W ++I+G+ K + + ++LF +
Sbjct: 260 VCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGR 319
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M G +E+T++SVL+AC + A LG V +V K ++N +G AL MYA CG
Sbjct: 320 MVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGS 379
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
+ A RVF + EKN+ ++ G IHG G EA+ +F++M G+ PD+ AVL+A
Sbjct: 380 LVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSA 439
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
CSH+GL+++GKEIFY M RDY VEP HY CLVDLL RA LDEAY VI NM ++PN
Sbjct: 440 CSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNED 499
Query: 401 LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRR 460
+W +LL+AC NV+LA I+ ++L +L P YV +SNIYAA+ +W+D +R
Sbjct: 500 VWTALLSACRLH---RNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRA 556
Query: 461 LMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
L+ +R + K P S +E+N +VH+F VGD H S++IY+ L+ + L++ Y
Sbjct: 557 LVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGY 610
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 213/390 (54%), Gaps = 23/390 (5%)
Query: 22 KNSNTAT-KSHHHLPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLV 76
K S+T+T S LLQ T+ L Q Q+HA + R +T LA KL
Sbjct: 13 KPSSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRR---NTYLATKLAACYA 69
Query: 77 NSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPI 136
+ YA +F+QI+ ++F +N++IRGYA R + LY +M+ G PD+FTYP
Sbjct: 70 VCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPF 129
Query: 137 LLKACGD--LRQV-KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
+LKACGD LR++ + VH+LVV ++ +++ Y FGDV++A+++FD+M +
Sbjct: 130 VLKACGDLLLREMGRKVHALVVVG-GLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVR 188
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
++ +W M++G VK R ++F MR G + TL+++LSAC ++ ++GK +H
Sbjct: 189 DLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIH 248
Query: 254 EFVNKN---CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
+V +N + N L ++ DMY C + A ++F+ + K+V +WNS+I G G
Sbjct: 249 GYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCG 308
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKH 369
+A+++F +M + G PD+VT+I+VL AC+ + G + Y ++R Y V V
Sbjct: 309 DAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGT 368
Query: 370 -----YGCLVDLLCRARLLDEAYEVIRNMP 394
Y L+C R+ DE E +N+P
Sbjct: 369 ALIGMYANCGSLVCACRVFDEMPE--KNLP 396
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 173/478 (36%), Positives = 266/478 (55%), Gaps = 40/478 (8%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP- 129
L+ V +I A F+ + ++NT+I GYA++G QL+ + P
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE------SPV 278
Query: 130 -DSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSV------------------------- 163
D FT+ ++ R V+ L K + N V
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 164 ----IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
+ + +IT Y G + A+ LFD+M +++ V+W AMI G+ + + E + LF
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
+M G +N + S LS CA++ A ELGK +H + K +G AL MY KCG
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
IEEA +FK + K++ +WN++I G + HG GE A++ F M+ G+KPDD T++AVL+
Sbjct: 459 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSH GL++KG++ FY M +DY V PN +HY C+VDLL RA LL++A+ +++NMP EP+A
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA 578
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
+WG+LL A N ELAE A +++ +EP N G YVL+SN+YA+ +W D GK+R
Sbjct: 579 AIWGTLLGASRVH---GNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLR 635
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
M+++ + K PG S IEI + H F VGD HP +EI++ LE + + +++ Y ++
Sbjct: 636 VRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSK 693
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 170/375 (45%), Gaps = 59/375 (15%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I+ V + + A +F + ++NT++ GYA+ G ++ +M + +
Sbjct: 132 MIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP----EKN 187
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKD--------------------------FNSV- 163
++ LL A +++ ++ KS++ F+S+
Sbjct: 188 DVSWNALLSAYVQNSKMEEA-CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN 246
Query: 164 ---IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
+ S +IT Y G + A+ LFD+ ++V TWTAM++G+++ + E +LF K
Sbjct: 247 VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDK 306
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN-KNCIILNDKLGAALTDMYAKCG 279
M E NE++ ++L+ E+ K + + + +N N + YA+CG
Sbjct: 307 M----PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWN-----TMITGYAQCG 357
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
I EA +F + +++ +W ++I G + G EA+++F QM+ G + + + + L+
Sbjct: 358 KISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALS 417
Query: 340 ACSHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLVD-----LLCRARLLDEAYEVIRNM 393
C+ +E GK++ + + Y+ GC V + C+ ++EA ++ + M
Sbjct: 418 TCADVVALELGKQLHGRLVKGGYET-------GCFVGNALLLMYCKCGSIEEANDLFKEM 470
Query: 394 PMEPNAVLWGSLLTA 408
+ + V W +++
Sbjct: 471 AGK-DIVSWNTMIAG 484
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 139/303 (45%), Gaps = 32/303 (10%)
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRL-----------ITFYCNFGD 179
S T P+L D+++ S +++ N + R+ I+ Y G+
Sbjct: 51 SQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGE 110
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
+ A+ LFD+M E+++V+W MI G+V+ +N + +LF M + V + ++LS
Sbjct: 111 FELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV----CSWNTMLSG 166
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
A G + + V + + + ND AL Y + +EEA +FK + +W
Sbjct: 167 YAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N ++GG EA + F M + D V+ ++T + +G I++ +++F
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLF----- 273
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
D +V + +V + R+++EA E+ MP E N V W ++L A G +E
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAML---AGYVQGERME 329
Query: 420 LAE 422
+A+
Sbjct: 330 MAK 332
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 277/487 (56%), Gaps = 10/487 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP L L Q K+VH I++ + ++ L++ + A +++
Sbjct: 350 LPALTDLNGLKQGKEVHGYIVRNCVNMDVF---LVSALVDIYFKCRDVRMAQNLYDAARA 406
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGV 150
+T+I GY G+ +Q++ ++ + P++ T +L C + + + +
Sbjct: 407 IDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQI 466
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H V+++ + + + L+ Y G + + +F +M++K+ VTW +MI+ +
Sbjct: 467 HGYVLRNA-YERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGK 525
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
+E +DLFR+M G++ N +T+ + LSACA+L A GK +H K I + +A
Sbjct: 526 PQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESA 585
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMYAKCG +E ALRVF+ + +KN +WNSII HG +E+V + MQ G KPD
Sbjct: 586 LIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPD 645
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
VT +A+++AC+HAGL+E+G ++F M + Y + P ++H+ C+VDL R+ LD+A + I
Sbjct: 646 HVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFI 705
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+MP +P+A +WG+LL AC NVELA+IA + L KL+P N G YVLMSNI A
Sbjct: 706 ADMPFKPDAGIWGALLHACRVHR---NVELADIASQELFKLDPANSGYYVLMSNINAVAG 762
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+WD K+RRLMK+ I+K PG S +++N+ H F+ D HP SE+IY+ L+ + LR
Sbjct: 763 RWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELR 822
Query: 511 EECYAAR 517
EE Y R
Sbjct: 823 EEGYVPR 829
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 202/426 (47%), Gaps = 53/426 (12%)
Query: 34 LPLLQKCT---HLVQFKQVHAQIIKASFDNRTISD-TQLA---KLIESLVNSSQIAYAHL 86
L +L+ C HL Q+HA+ + + +SD LA +L+ V + + A
Sbjct: 36 LAVLRGCVSAPHLPLGLQIHARAVVSG----ALSDHNHLALHTRLLGMYVLARRFRDAVA 91
Query: 87 VFNQIINP---STFAFNTVIRGYAEAGLGHRGIQLYTQMIGN--GLDPDSFTYPILLKAC 141
VF+ + S+ +N +IRG+ AG H + Y +M + PD+ T P ++K+C
Sbjct: 92 VFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSC 151
Query: 142 ---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
G + + VH ++ + ++ + L+ Y + G + +A+ FD + E++ V W
Sbjct: 152 AALGAMSLGRLVHR-TARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLW 210
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
M++G +K + + LFR MR SG E N TL LS CA G +H K
Sbjct: 211 NVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVK 270
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+ + L MYAKC +++A R+F+++ + ++ TWN +I G +G EA +
Sbjct: 271 CGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGL 330
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI---------------------FYNM 357
F+ MQ SG +PD +TL+++L A + +++GKE+ Y
Sbjct: 331 FYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFK 390
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLL---------DEAYEVIRNM---PMEPNAVLWGSL 405
RD ++ N+ +D++ + ++ +EA ++ R + ++PNAV S+
Sbjct: 391 CRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASV 450
Query: 406 LTACAS 411
L CAS
Sbjct: 451 LPGCAS 456
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 170/344 (49%), Gaps = 8/344 (2%)
Query: 69 AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD 128
+ L++ ++ + A F+ I +N ++ G +AG ++L+ M +G +
Sbjct: 180 SALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCE 239
Query: 129 PDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL 185
P+ T L C DL +HSL VK + L+ Y + A
Sbjct: 240 PNFATLACFLSVCATDADLLSGAQLHSLAVKC-GLEPEVAVANTLLAMYAKCQCLDDAWR 298
Query: 186 LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA 245
LF+ M + ++VTW MI+G V+ + E LF M+ SG + +TLVS+L A +L
Sbjct: 299 LFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNG 358
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
+ GK VH ++ +NC+ ++ L +AL D+Y KC + A ++ +V +++I G
Sbjct: 359 LKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISG 418
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVE 364
++G EEA++MF + IKP+ VT+ +VL C+ + G++I Y +R Y+ +
Sbjct: 419 YVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERK 478
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
V+ L+D+ + LD ++ + M + + V W S++++
Sbjct: 479 CYVE--SALMDMYAKCGRLDLSHYIFLKMS-QKDEVTWNSMISS 519
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 178/503 (35%), Positives = 294/503 (58%), Gaps = 27/503 (5%)
Query: 35 PLLQKCTHLVQF----------KQVHAQIIKAS---FDNRTISDTQLAKLIESLVNSSQI 81
P L+ C L++ KQ+HA+ ++A+ + ++ L L +
Sbjct: 13 PALRHCVALLRLHLPSPSVAAAKQIHARALRAAGVPLSHPLLAKHLLFHLASLRAGPPPL 72
Query: 82 AYAHLVFNQII-NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
YA V + ++ +P F+ NTV+R A + + L+ + + PD+ TYP LL+A
Sbjct: 73 LYAVTVLSCLLPDPDPFSLNTVLRIAASSAHPRIALALHRRRLA---PPDTHTYPPLLQA 129
Query: 141 CGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT--EKNV 195
C L R+ + +H+ K+ +++ L+ Y G +SA +FD++ E+N+
Sbjct: 130 CTRLLALREGESLHAEAAKN-GLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNL 188
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V+W +++NG E + +FR+ ++ + + T+VSVL+ACA +GA LG+ VH F
Sbjct: 189 VSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVF 248
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHGCGEE 314
+K ++ N +G AL D+YAKCG +E+A +VF+ + + + V +W S+I GLA +G G++
Sbjct: 249 ASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKD 308
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+++F M+ + P D+T++ VL ACSH GL++ G F M+ Y + P ++H GC+V
Sbjct: 309 ALELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMV 368
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
DLL RA ++EA+ I MP+EPNAV+W +LL ACA +EL E A RL++L+P
Sbjct: 369 DLLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHK---KLELGEAAWARLVELDPG 425
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+ G+YVL+SN+YAA +W DA +R+ M + KNPG S++E+ + V+EF++GD HP
Sbjct: 426 HSGDYVLLSNLYAAVGRWADAHVLRKTMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPE 485
Query: 495 SEEIYSMLEYVAISLREECYAAR 517
S++IY L +A LR + Y R
Sbjct: 486 SDQIYQTLAEIAERLRCQGYVPR 508
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 141/306 (46%), Gaps = 27/306 (8%)
Query: 21 HKNSNTATKSHHHLPLLQKCTHLVQFKQ---VHAQIIKASF------DNRTISDTQLAKL 71
H+ +H + PLLQ CT L+ ++ +HA+ K N + L
Sbjct: 111 HRRRLAPPDTHTYPPLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACGL 170
Query: 72 IESLVNSSQIAYAHLVFNQI--INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP 129
ES AH VF++I + + ++N+V+ G+A G + + ++ + + L P
Sbjct: 171 FES---------AHRVFDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMP 221
Query: 130 DSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
D FT +L AC G L + VH K + H LI Y G V+ A +
Sbjct: 222 DGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGNS-HVGNALIDLYAKCGGVEDAWKV 280
Query: 187 FDQM-TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA 245
F++M + VV+WT++I G ++ ++LF M + ++T+V VL AC++ G
Sbjct: 281 FEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYACSHCGL 340
Query: 246 SELG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR-VFKIVLEKNVCTWNSII 303
+ G ++ +E +K I + + D+ + G +EEA + + +E N W +++
Sbjct: 341 VDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRTLL 400
Query: 304 GGLAIH 309
G A+H
Sbjct: 401 GACAMH 406
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 293/514 (57%), Gaps = 50/514 (9%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L L++ + L + KQ+H II + ++ + L++ + A VF ++ +
Sbjct: 137 LYLMKASSFLSEVKQIHCHIIVSG--CLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPH 194
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGV 150
P +FN +I GYA+ G ++LY +M+ +G++PD +T LL CG D+R KGV
Sbjct: 195 PDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGV 254
Query: 151 HSLV----------------------------VKSKDFNSV----IHSLTRLITFYCNFG 178
H + + + F+++ + S ++ + G
Sbjct: 255 HGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLG 314
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVK----QKNYREGIDLFRKMRD-SGVEVNELTL 233
D+++AQ +FDQM ++++V+W +++ G+ K Q+ RE LF +M V+ + +T+
Sbjct: 315 DMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRE---LFYEMTIVEKVKPDRVTM 371
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
VS++S AN G G+WVH V + + + L +AL DMY KCG IE A VFK E
Sbjct: 372 VSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATE 431
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K+V W S+I GLA HG G++A+++F +MQ G+ P++VTL+AVLTACSH+GL+E+G +
Sbjct: 432 KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHV 491
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI-RNMPMEPNAVLWGSLLTACASA 412
F +M+ + +P +HYG LVDLLCRA ++EA +++ + MPM P+ +WGS+L+AC
Sbjct: 492 FNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGG 551
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
+D +E AE+A+ L+KLEP +G YVL+SNIYA +W + K R M+ R + K G
Sbjct: 552 ED---IETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAG 608
Query: 473 CSVIEINDVVHEFMVGDGR-HPCSEEIYSMLEYV 505
S + + +H F+ + + HP EI +L+++
Sbjct: 609 YSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHL 642
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 207/422 (49%), Gaps = 41/422 (9%)
Query: 30 SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF- 88
+H L LL+ C QFKQV AQI++ + T ++L ++ + A L+F
Sbjct: 34 NHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLI-FFSAITYPENLDLAKLLFL 92
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK 148
N NP+ F +NT+I + + + LY+ MI + + PD T+ L+KA L +VK
Sbjct: 93 NFTPNPNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVK 150
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
+H ++ S + + L+ FY G+ A+ +F +M +V ++ MI G+ KQ
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK-- 266
E + L+ KM G+E +E T++S+L C +L LGK VH ++ + + +
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 270
Query: 267 LGAALTDMYAKC-------------------------------GYIEEALRVFKIVLEKN 295
L AL DMY KC G +E A VF + +++
Sbjct: 271 LSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRD 330
Query: 296 VCTWNSIIGGLAIHGCGEEAVK-MFWQMQM-SGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
+ +WNS++ G + GC + V+ +F++M + +KPD VT++++++ ++ G + G+ +
Sbjct: 331 LVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
+ + +++ + L+D+ C+ +++ A+ V + E + LW S++T A
Sbjct: 391 -HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT-ATEKDVALWTSMITGLAFHG 448
Query: 414 DG 415
+G
Sbjct: 449 NG 450
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 179/453 (39%), Positives = 275/453 (60%), Gaps = 12/453 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQI-INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI--GNGL 127
+I V Q+ A +F ++ + + + +I GY + G + L+ QM+ + +
Sbjct: 165 IISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEV 224
Query: 128 DPDSFTYPILLKACGDL--RQVKGVHSLV--VKSKDFNSVIHSLTRLITFYCNFGDVKSA 183
P++ T LL AC L +V S+ V N+++ +T LI Y GDV+ A
Sbjct: 225 QPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTIL--VTALIDMYSKCGDVEKA 282
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
+FD ++ KN+ +W A+I G V+ E IDL+R M+ V+ NE+TLV+VLSACA L
Sbjct: 283 WRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGL 342
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
GA ELG+ VH ++ +N + LN L AL DMYAKCG I++A +F EK+V WN++I
Sbjct: 343 GALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMI 402
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
GLA HG G +++ +F QM +G++P+DVT I VL+AC+H+GL+E+G+ F +M + +
Sbjct: 403 LGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGL 462
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
P ++HY C+VDLL RA L EAYE+++NM + P++++WG+LL+AC N+ELA+
Sbjct: 463 SPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIH---RNLELADK 519
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVH 483
E ++ + N G +L+SNIYA+ +W D ++RR +KE+ I K GCS +E++ VVH
Sbjct: 520 ISETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVH 579
Query: 484 EFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
F+V D H S EIY E + L+ E Y A
Sbjct: 580 RFVVEDTTHLKSGEIYGAYEILVNHLKAEGYVA 612
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 139/421 (33%), Positives = 221/421 (52%), Gaps = 47/421 (11%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LL+ T L Q Q+HAQ + +T LI L++ I YA V +Q +
Sbjct: 3 LSLLRTATSLTQIHQIHAQTLIHGLPLQT-------HLIPKLIDLHSIDYARFVLDQTPS 55
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGV 150
P+ F++N++IR Y G + LY +M+ + P +FT+P +LKAC L V + +
Sbjct: 56 PTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQI 115
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYC-------------------------------NFGD 179
H+ V++ F S + LI YC +G
Sbjct: 116 HTHVLR-LGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQ 174
Query: 180 VKSAQLLFDQMT-EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV--NELTLVSV 236
V+ A+ LF++M +NVV WTAMING+ K+ ++ E + LFR+M S EV N T+V +
Sbjct: 175 VEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCL 234
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
LSAC+ L E+G+++ F++ N I LN L AL DMY+KCG +E+A R+F V KN+
Sbjct: 235 LSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNL 294
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
+WN+II G G EEA+ ++ M+ +KP+++TL+ VL+AC+ G +E G+E+
Sbjct: 295 PSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLY 354
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
+ R+ ++ NV LVD+ + +D+A + E + LW +++ A DG
Sbjct: 355 LGRN-GLDLNVILATALVDMYAKCGKIDDACLIFVKTS-EKDVALWNAMILGLAYHGDGR 412
Query: 417 N 417
+
Sbjct: 413 D 413
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 275/457 (60%), Gaps = 16/457 (3%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDP 129
LI ++A+A VF++I ++N++I GYA+AG ++++ +M +G +P
Sbjct: 157 LITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEP 216
Query: 130 DSFTYPILLKACGDL------RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSA 183
D + +L ACG+L R V+G +V + NS I S LI+ Y GD+ SA
Sbjct: 217 DEMSLVSVLGACGELGDLELGRWVEGF--VVERGMTLNSYIGS--ALISMYAKCGDLGSA 272
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
+ +FD M ++V+TW A+I+G+ + E I LF M++ V N++TL +VLSACA +
Sbjct: 273 RRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATI 332
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
GA +LGK + E+ ++ + + AL DMYAKCG + A RVFK + +KN +WN++I
Sbjct: 333 GALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMI 392
Query: 304 GGLAIHGCGEEAVKMFWQM--QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
LA HG +EA+ +F M + G +P+D+T + +L+AC HAGL+ +G +F M +
Sbjct: 393 SALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLF 452
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
+ P ++HY C+VDLL RA L EA+++I MP +P+ V G+LL AC S NV++
Sbjct: 453 GLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKK---NVDIG 509
Query: 422 EIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
E + +++++P N GNY++ S IYA W+D+ +MR LM+++ I K PGCS IE+ +
Sbjct: 510 ERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENH 569
Query: 482 VHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
+HEF GDG S ++ ++++ + L+ E Y ++
Sbjct: 570 LHEFHAGDGLCLDSIDLSNIIDLLYEELKREGYVPKV 606
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 213/384 (55%), Gaps = 18/384 (4%)
Query: 36 LLQKCTHLVQFKQVHAQ-IIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII-N 93
L ++C+ +QVHAQ ++K+S + L+ ++ YA L+F+ I +
Sbjct: 24 LAKQCSSSKTLQQVHAQMVVKSSIHSPN------NHLLSKAIHLKNFTYASLLFSHIAPH 77
Query: 94 PSTFAFNTVIRGYAEAGLGHR-GIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKG 149
P+ +AFN +IR + + L+ +M+ L P++FT+P +C +L +
Sbjct: 78 PNDYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARA 137
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
HSLV K +S H+ LIT Y G V A+ +FD++ +++V+W +MI G+ K
Sbjct: 138 AHSLVFKLA-LHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAG 196
Query: 210 NYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
RE +++F +M R G E +E++LVSVL AC LG ELG+WV FV + + LN +G
Sbjct: 197 CAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIG 256
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+AL MYAKCG + A R+F + ++V TWN++I G A +G +EA+ +F M+ +
Sbjct: 257 SALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVT 316
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
+ +TL AVL+AC+ G ++ GK+I Y +R ++ + V L+D+ + L A
Sbjct: 317 ENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVA--TALIDMYAKCGSLASAQ 374
Query: 388 EVIRNMPMEPNAVLWGSLLTACAS 411
V + MP + N W ++++A AS
Sbjct: 375 RVFKEMP-QKNEASWNAMISALAS 397
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 175/483 (36%), Positives = 280/483 (57%), Gaps = 14/483 (2%)
Query: 37 LQKCTHLVQFKQVHAQI-IKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L C +L Q +QVHAQI +F N +++ KL+ V + A +F+ +
Sbjct: 60 LLSCRNLFQVRQVHAQIATNGAFRNLAVAN----KLLYMYVERGALEDAQELFDGMSKRH 115
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHS 152
++++ ++ GYA+ G ++ +++ +G D ++ P++++AC DL+ +K +H
Sbjct: 116 PYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHC 175
Query: 153 LVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
+ +K D+ + L+ Y V+ A +F +M ++++ TWT MI +
Sbjct: 176 ITLKCGLDYGHFV--CATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVP 233
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
E + F +MR+ G+ +++ LV+V+ ACA LGA K +H ++N L+ LG A+
Sbjct: 234 VESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAM 293
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
DMYAKCG +E A +F + +NV TW+++I HG GE+A+++F M SGI P+
Sbjct: 294 IDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNR 353
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
+T +++L ACSHAGLIE+G+ F +M +Y V P+VKHY C+VDLL RA LDEA E+I
Sbjct: 354 ITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIE 413
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
MP+E + VLWG+LL AC +++LAE L+KL+ G+YVL+SNIYA +
Sbjct: 414 GMPVEKDEVLWGALLGACRIH---RHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGK 470
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
W+D K R LM + + K PG + IE+ + +++F VGD HP S EIY ML+ + L
Sbjct: 471 WEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEV 530
Query: 512 ECY 514
Y
Sbjct: 531 AGY 533
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 297/522 (56%), Gaps = 47/522 (9%)
Query: 6 VPNSQLTHFTNSANSHKNSNT-----------ATKSHHHLPL--LQKCTHLVQFKQVHAQ 52
P+S +TH +S NS N T T+SH H P+ + T + + Q
Sbjct: 10 TPSSLVTHPNSSPNSKPNQPTFPSRPHSTKYHLTRSHTHSPIDPIVSWTSSIALHCRNGQ 69
Query: 53 IIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST-FAFNTV-IRGYAEAG 110
+ +A+ + S Q+A + + H+ F +++ T F + G A
Sbjct: 70 LPEAAAE---FSRMQIAGVRPN----------HITFLTLLSACTDFPLEGLRFGGSIHAY 116
Query: 111 LGHRGIQLYTQMIGNGLDPDSFTYPILLKACG--DLRQVKGVHSLVVKSKDFNSVIHSLT 168
+ G+ M+G L + CG DL + V S +N++I
Sbjct: 117 VRKLGLDTENVMVGTALVD-------MYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCM 169
Query: 169 RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV 228
R G+V A +LFDQM+E++ ++WT+MI G VK+ + + ++ FR+M+ +GVE
Sbjct: 170 R-------NGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEP 222
Query: 229 NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
+ +T++SVL+ACANLGA LG W++ FV K N K+ +L DMY++CG I A +VF
Sbjct: 223 DYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVF 282
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
+ + ++++ +WNS+I G A++G EEA++ F M+ G +PD V+ LTACSH+GL++
Sbjct: 283 EQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVD 342
Query: 349 KGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+G + F M+R K+ P ++HYGCLVDL RA L++A VI NMPM+PN V+ GSLL A
Sbjct: 343 EGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAA 402
Query: 409 CASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIV 468
C + D V LAE M+ L +++P +D NYVL+SNIYAA +WD A K+R+ MK I
Sbjct: 403 CRTHGD---VGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIH 459
Query: 469 KNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
K PG S IE++ +HEF+ GD H ++ IY+ML+++ + LR
Sbjct: 460 KKPGFSSIEMDGSIHEFVAGDKTHVETQNIYAMLDHLFLELR 501
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 188/524 (35%), Positives = 280/524 (53%), Gaps = 50/524 (9%)
Query: 33 HLPLLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQL--AKLIESLVNSSQIAYAHLV 87
+ P+ Q T L K QVHA ++ R + T L +K++ +S I + V
Sbjct: 73 YAPVFQFLTGLNMLKLGHQVHAHMLL-----RGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV 147
FN I PS+ FN++IR YA G R + Y M G D FT+P +LK+ +L V
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187
Query: 148 ---KGVHSLVVK--------------------------SKDFNSV----IHSLTRLITFY 174
K VH L+++ K F+++ + S L+ Y
Sbjct: 188 WMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGY 247
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM--RDSGVEVNELT 232
G + +A +F++M +N+V+WT MI+G+ + ++ + LF +M DSGV N +T
Sbjct: 248 TKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVT 307
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV- 291
++SVL ACA L E G+ +HE + + N + ALT MYAKCG + +A F +
Sbjct: 308 IMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLN 367
Query: 292 -LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
EKN+ WN++I A +G G +AV F +M +GI+PDD+T +L+ CSH+GL++ G
Sbjct: 368 RNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 427
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ F +M Y + P V+HY C+ DLL RA L EA +++ MPM +WGSLL AC
Sbjct: 428 LKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACR 487
Query: 411 SADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN 470
N+E+AE A +L LEP N GNYVL+SN+YA +W + K+R ++K + K+
Sbjct: 488 KHR---NLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKS 544
Query: 471 PGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
PGCS IEIN H F+ GD HP +EIY LE + ++ Y
Sbjct: 545 PGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGY 588
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 303/523 (57%), Gaps = 26/523 (4%)
Query: 2 LKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNR 61
+++ +P + TH +A H + L L L KQ+HA+ ++A+
Sbjct: 1 MREAIPRAPCTHPAAAALRHCVAL--------LRLHLASPSLATAKQLHARALRAA-PGV 51
Query: 62 TISDTQLAKLIE---SLVNSSQIAYAHLVFNQII-NPSTFAFNTVIRGYAEAGLGHRGIQ 117
T S LAK + + + + + YA V + ++ +P F+ NTV+R +A + +
Sbjct: 52 TPSHPLLAKHLLFHLAALKAPPLRYAVAVLSGLLPSPDPFSLNTVLRIFASSARPRVALA 111
Query: 118 LYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFY 174
L+ + + PD+ TYP LL+AC L R +G+H+ K+ S++ L+ Y
Sbjct: 112 LHRRHLA---PPDTHTYPPLLQACARLLALRYGEGLHAEACKN-GLVSLVFVKNSLVHLY 167
Query: 175 CNFGDVKSAQLLFDQMT--EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
G +SA +FD++ E+N+V+W +++NG E + +FR+M + + T
Sbjct: 168 GACGLFESAHRVFDEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFT 227
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KIV 291
+VSVL+ACA +G LG+ VH FV K ++ N G AL D+YAKCG +++A ++F ++
Sbjct: 228 VVSVLTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMG 287
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
+ + V +W S+I GLA++G G +A+++F M+ + P ++T++ VL ACSH GL++ G
Sbjct: 288 VGRTVVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGF 347
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
F M+ +Y + P ++H GC+VDLL RA ++EA+ I MP+EPNAV+W +LL ACA
Sbjct: 348 RYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRTLLGACAM 407
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
+E+ E A RL++L+P + G+YVL+SN+YA +W D +R+ M + KNP
Sbjct: 408 HK---KLEIGEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMVTHGVRKNP 464
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
G S++E+ + V+EF++GD HP +++IY ML +A LR + Y
Sbjct: 465 GHSLVELRNSVYEFVMGDRSHPETDQIYEMLGDIAERLRRQGY 507
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 284/509 (55%), Gaps = 11/509 (2%)
Query: 13 HFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLI 72
H + +S + + T H + + +L +++HA + + F D L I
Sbjct: 37 HDLDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSL---I 93
Query: 73 ESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSF 132
+ AH VF+++ N ++ ++I GYA+ + I L M+ P+ F
Sbjct: 94 HLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGF 153
Query: 133 TYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
T+ LLKA G D +H+L VK D++ ++ + L+ Y G + A +FD+
Sbjct: 154 TFASLLKAVGAYADSGIGGQIHALAVKC-DWHEDVYVGSALLDMYARCGKMDMATAVFDK 212
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
+ KN V+W A+I+G ++ + + +F +M+ +G E T S+ SA A +GA E G
Sbjct: 213 LDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQG 272
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
KWVH + K+ L +G + DMYAK G + +A +VF+ VL K++ TWNS++ A +
Sbjct: 273 KWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQY 332
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
G G+EAV F +M+ SGI + ++ + +LTACSH GL+++GK +++M ++Y +EP ++H
Sbjct: 333 GLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKH-YFDMIKEYNLEPEIEH 391
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
Y +VDLL RA LL+ A I MPMEP A +WG+LL AC N ++ + A + +
Sbjct: 392 YVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHK---NAKVGQFAADHVF 448
Query: 430 KLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGD 489
+L+P + G VL+ NIYA+ WD A ++R++MK + K P CS +EI + VH F+ D
Sbjct: 449 QLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVAND 508
Query: 490 GRHPCSEEIYSMLEYVAISLREECYAARM 518
HP +EEIY M + +++ +R+E Y M
Sbjct: 509 DTHPRAEEIYKMWDEISMKIRKEGYVPDM 537
>gi|147841473|emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
Length = 396
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 156/383 (40%), Positives = 251/383 (65%), Gaps = 7/383 (1%)
Query: 128 DPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQ 184
+PB T +L C GDL + L +K+ S + T ++ Y G V +
Sbjct: 3 EPBEITLATVLSICAKLGDLEMGLRIKKLX-DNKNLGSNMIVSTAMLEMYVKCGAVDDGR 61
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
L+FD M ++VV W+AMI G+ + E ++LF M+ + ++ N++TLVSVLSACA LG
Sbjct: 62 LVFDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLG 121
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
+ E G+ + +V +I N + +AL MY+KCG I +A ++F + +++ TWNS+I
Sbjct: 122 SVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIM 181
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVE 364
GLAI+G E+A+ ++ +M+ +KP+++T + +LTAC+HAG +E G E F +MR D+ +
Sbjct: 182 GLAINGFAEDAIALYNRMKEIEVKPNNITFVGLLTACTHAGHVELGLEFFRSMRSDHNIS 241
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIA 424
PN++H+ C+VDL CR+ L +AYE I M +EPN V+WG+LL+A + NVELAE+A
Sbjct: 242 PNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSA---SRIHLNVELAELA 298
Query: 425 MERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHE 484
++L++LEP N GNYV++SNIYA+ ++W +A K+R+LMK++ + K S +E+ D VH+
Sbjct: 299 GKKLLELEPDNSGNYVILSNIYASASRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHK 358
Query: 485 FMVGDGRHPCSEEIYSMLEYVAI 507
F+VGD HP S+E+YS ++ +A+
Sbjct: 359 FLVGDTSHPRSDEVYSTIDGLAL 381
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 129/262 (49%), Gaps = 6/262 (2%)
Query: 54 IKASFDNRTISDTQLAK--LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGL 111
IK DN+ + + ++E V + LVF+ + ++ +I GYA+ G
Sbjct: 28 IKKLXDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVXWSAMIAGYAQNGR 87
Query: 112 GHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSL--VVKSKDFNSVIHSLTR 169
+ ++L+ M + P+ T +L AC L V+ + V+S+ S ++ +
Sbjct: 88 SNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASA 147
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
L+ Y G++ A+ +FD++ +++ VTW +MI G + I L+ +M++ V+ N
Sbjct: 148 LLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPN 207
Query: 230 ELTLVSVLSACANLGASELG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR-V 287
+T V +L+AC + G ELG ++ + + I N + A + D++ + G + +A +
Sbjct: 208 NITFVGLLTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFI 267
Query: 288 FKIVLEKNVCTWNSIIGGLAIH 309
++ +E NV W +++ IH
Sbjct: 268 CRMEVEPNVVIWGTLLSASRIH 289
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 182/488 (37%), Positives = 283/488 (57%), Gaps = 17/488 (3%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAY---AHLVFNQII 92
++QKCT L KQV A ++ N IS ++ +L+E S AY A + I
Sbjct: 7 IIQKCTTLSHIKQVQAHLLTTGQFNLRISPSR-TRLLEHCALSPSPAYLPYAAHIHRHIP 65
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKG 149
+PST FN ++RG A + + + L PD+ T+ L A L +
Sbjct: 66 HPSTNDFNALLRGLARGPHPTHALTFLSTI----LHPDALTFSFSLIASARALALSETSQ 121
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+HS +++ ++ T LI Y GD+ SAQ +FD++ ++V W A+I G +
Sbjct: 122 IHSHLLRRGCHADILLGTT-LIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGS 180
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E + LF +MR G ++NE++++ L+AC+ LGA G+ VH V K + +N ++
Sbjct: 181 KSSEALALFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQVCN 240
Query: 270 ALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
A+ DMYAKCG+ ++ RVF + K+V TWN++I A+HG G A+++F +M + ++
Sbjct: 241 AVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQVE 300
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
D VT +AVL AC+HAGL+E+G +F M V NVKHYG +VDLL RA L EAY
Sbjct: 301 MDSVTYLAVLCACNHAGLVEEGVRLFDEM-VGRGVNRNVKHYGSVVDLLGRAGRLGEAYR 359
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
+I +MP+ P+ VLW SLL AC + NVE+AE+A +L+++ + G++VL+SN+YAA
Sbjct: 360 IINSMPIVPDVVLWQSLLGACKTY---GNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAA 416
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
+ +W+D G++R MK R++ K PG S IE+ V+H+F+ GD HP EIY+ L+ +
Sbjct: 417 RERWEDVGRVREAMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFR 476
Query: 509 LREECYAA 516
++ Y A
Sbjct: 477 IKAFGYVA 484
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 290/534 (54%), Gaps = 71/534 (13%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINP 94
++++C+ + A +IK S + D +L + I + + ++ A Q+ P
Sbjct: 779 IIKQCSTPKLLESALAAMIKTSLNQ----DCRLMNQFITACTSFKRLDLAVSTMTQMQEP 834
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA-------------- 140
+ F +N + +G+ R ++LY +M+ + + P S+TY L+KA
Sbjct: 835 NVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAH 894
Query: 141 ----------------------CGDLRQVKGVHSLVVKSKDF------------------ 160
G +R+ + V + + D
Sbjct: 895 IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSA 954
Query: 161 NSVIHSLTR--------LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
NS+ + ++ LI Y G+++ A+ LF+QM K++++WT MI G+ + K YR
Sbjct: 955 NSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYR 1014
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E I +F KM + G+ +E+T+ +V+SACA+LG E+GK VH + +N +L+ +G+AL
Sbjct: 1015 EAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALV 1074
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
DMY+KCG +E AL VF + +KN+ WNSII GLA HG +EA+KMF +M+M +KP+ V
Sbjct: 1075 DMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAV 1134
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
T ++V TAC+HAGL+++G+ I+ +M DY + NV+HYG +V L +A L+ EA E+I N
Sbjct: 1135 TFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGN 1194
Query: 393 MPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQW 452
M EPNAV+WG+LL C N+ +AEIA +L+ LEP N G Y L+ ++YA + +W
Sbjct: 1195 MEFEPNAVIWGALLDGCRIH---KNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRW 1251
Query: 453 DDAGKMRRLMKERNIVK-NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
D ++R M+E I K PG S I I+ H F D H S+E+ +L+ +
Sbjct: 1252 RDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 1305
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 251/394 (63%), Gaps = 9/394 (2%)
Query: 124 GNGLDPDSFTYPI-LLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
G+ DP + + + A GD+ V+ + +V S D V T ++ GDV +
Sbjct: 154 GHATDPHVQSGAVSMYAAVGDVGAVRAAFAEIV-SPDVVCV----TAMLGALSAGGDVDT 208
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A+ LFD M +++ V W AM+ G+V+ RE + LF +M+ +GV V+E+TLVSVL+ACA
Sbjct: 209 ARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQ 268
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
+GA E G WVH +V + ++ LG AL DMY+KCG + ++ VF+ + E+N+ TW S
Sbjct: 269 MGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSA 328
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
+ GLA++G GEE +++F +M+ +G++P+ VT +AVL CS AGL+E+G+ F +M+ +K
Sbjct: 329 LSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHK 388
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
VEP ++HYGC+VDL RA LD+A + I +MP+EP+ +WG+LL A + NV+L +
Sbjct: 389 VEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALLNASRIHN---NVDLGK 445
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
AM +L ++E ND +VL+SNIYA W K+R +MK + + K PGCS IE++ V
Sbjct: 446 HAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSKGVKKMPGCSAIEVDGKV 505
Query: 483 HEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
HEF VG HP ++I +ML ++ LR + YAA
Sbjct: 506 HEFFVGSKSHPRYKDIQTMLAEMSHRLRLQGYAA 539
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 122/262 (46%), Gaps = 7/262 (2%)
Query: 54 IKASFDNRTISDTQ-LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLG 112
++A+F D + ++ +L + A +F+ + A+N ++ GY G
Sbjct: 178 VRAAFAEIVSPDVVCVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRS 237
Query: 113 HRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTR 169
+ L+ +M G+ T +L AC G L + VHS V S+ + T
Sbjct: 238 REALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVC-SRGMRVSVTLGTA 296
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
L+ Y G V + +F+ M E+N+ TWT+ ++G E ++LF++M +G+E N
Sbjct: 297 LVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPN 356
Query: 230 ELTLVSVLSACANLGASELGKWVHEFV-NKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
+T V+VL C+ G E G+ + + +K+ + + + D+Y + G +++A+
Sbjct: 357 GVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFI 416
Query: 289 -KIVLEKNVCTWNSIIGGLAIH 309
+ +E + W +++ IH
Sbjct: 417 NSMPVEPHEGVWGALLNASRIH 438
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 187/500 (37%), Positives = 284/500 (56%), Gaps = 45/500 (9%)
Query: 40 CTHLVQFKQVHAQIIK-ASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPST 96
CT L +Q H I+K A F N D L++ I + +N +Y+ FN
Sbjct: 23 CTTLTHLQQTHTFILKHALFQN----DINLSRFIHKTASLNYPSYSYSIFTFNHNRPFPI 78
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSL 153
F +N +I + + ++ + GL DS++ P +LK+ D K +H +
Sbjct: 79 FVYNNIIYALYSSN-AKLAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCV 137
Query: 154 -VVKSKDFN-SVIHSLTRL--------------------------ITFYCNFGDVKSAQL 185
VV D N SV SL ++ I Y GDV +A+
Sbjct: 138 GVVTGLDKNVSVCSSLIQMYSCYDVCSARKLFDEFGGNGCVLNAMIVAYVKVGDVSNARK 197
Query: 186 LFDQMTE--KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
LFD M E K+V +WTAMI+G+ + N E I LFR+M+ V+ +E+ +++VLSACA+L
Sbjct: 198 LFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADL 257
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
GA LG+W+H ++ K+ + L +L DMYAK G I +AL +F+ + K + TW ++I
Sbjct: 258 GALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMI 317
Query: 304 GGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
GLA+HG G+EA+++F M+ +KP++VT IA+L+ACSH GL+E G++ F +MR Y
Sbjct: 318 AGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYG 377
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
+EP ++HYGC++DLL RA L EA E++ MP E NA +WGSLL A D ELAE
Sbjct: 378 IEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDA---ELAE 434
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
A+ L LEP + GNY L+SN YA+ +W+++ +R++M++ + K PG S IE+N++V
Sbjct: 435 EALRHLTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVSFIEVNNIV 494
Query: 483 HEFMVGDGRHPCSEEIYSML 502
+EF+ GD +IY +L
Sbjct: 495 YEFIAGDKLSIYFVDIYDVL 514
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 184/531 (34%), Positives = 291/531 (54%), Gaps = 71/531 (13%)
Query: 26 TATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAH 85
TA ++ + +L KC L + +Q+HAQ+IK + N + ++L S + YA
Sbjct: 2 TAISTNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYAS 61
Query: 86 LVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG--NGLDPDSFTYPILLKACGD 143
VF++I +P++F F +I+G+++ + LY +M+ N F+ P +LKACG
Sbjct: 62 SVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGK 121
Query: 144 L------RQVKGV-------------HSLVVKSKDFNSV--------------IHSLTRL 170
L RQV G +S+V DF + + S +
Sbjct: 122 LLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSM 181
Query: 171 ITFYCNFGDVKSAQLLFDQMTE-------------------------------KNVVTWT 199
I Y G+++ A LFD+M E K+VVTWT
Sbjct: 182 IAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWT 241
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
+MI+ +V+ + + +DLFR+M G+ + +VSVLSA A+LG E GKW+H +V+ N
Sbjct: 242 SMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMN 301
Query: 260 CIILNDK-LGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
I L+ +G+AL DMY+KCGYIE A VF+ I +N+ WNS+I GLAIHG EA+
Sbjct: 302 KIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALD 361
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL 377
+F +M+ I+P+++T + +L+ CSH GL+E+G+ F +M YK+ P ++HYGC++DL
Sbjct: 362 IFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLF 421
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDG 437
RA L++A VI+NMP E + + W ++L+A ++E+ + A R I+L P +
Sbjct: 422 GRAGRLEDALGVIQNMPFEADLLAWKAILSASMKH---GHIEIGKSAALRAIELAPDDSS 478
Query: 438 NYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
+YVL+SNIYA +WDD K+R +M++R + K GCS + +B VHEF+ G
Sbjct: 479 SYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVBGKVHEFLXG 529
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/496 (35%), Positives = 273/496 (55%), Gaps = 38/496 (7%)
Query: 55 KASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
+ +FD ++ D +I L + A + + + + +I GY+ AG
Sbjct: 160 RRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAA 219
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNS-------- 162
+ + M+ +G+ PD T +L ACG L+ + +H LV + S
Sbjct: 220 EAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALI 279
Query: 163 --------------VIHSLTR---------LITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
V +L R +I YC G V A+ LFDQM + +V+T+
Sbjct: 280 DMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFN 339
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
++I G++ RE + LF KMR G+ + T+V +L+A A+LGA G+ +H + +
Sbjct: 340 SLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQR 399
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ + LG AL DMY KCG +EEA+ FK + ++V TW+++IGGLA +G G+ A++ F
Sbjct: 400 LVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHF 459
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
+ M+ G + VT IAVLTACSH+ L+++G+ F MR + + P ++HYGC++DLL R
Sbjct: 460 FWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGR 519
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
+ LLDEA ++++ MPM+PNAV+W S+L+AC NV+LA+ A L+KLEP D Y
Sbjct: 520 SGLLDEAMDLVQTMPMQPNAVIWASILSACRVHK---NVDLAQNAAHHLLKLEPAEDAVY 576
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
V M NIY QW+DA K+RRLM++R + K G S I + VH+F+VGD HP EI
Sbjct: 577 VQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIV 636
Query: 500 SMLEYVAISLREECYA 515
M+E + L+ Y+
Sbjct: 637 VMMEEIGRRLKSAGYS 652
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 191/444 (43%), Gaps = 88/444 (19%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLV------NSSQIAYAHLVFNQIINPSTFA 98
Q ++HA + + R + A L+ SL + + YA +F+++ STF
Sbjct: 14 QATELHALVTTS---GRLLHPPSAAHLLNSLTSCISPSDPLHLRYALSLFDRM-PCSTFL 69
Query: 99 FNTVIRGYAEAGLG-HRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLV--- 154
F+T +R A G R I LY +M G + PD+FT+ L K C G H L+
Sbjct: 70 FDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCAR----GGAHVLLGRM 125
Query: 155 VKSKDFNSVIHSLTRLIT-----FYCNFGDVKSAQLLFDQMTEK---------------- 193
+ + F +++ S LI Y G A+ FD+ + K
Sbjct: 126 LHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMG 185
Query: 194 ---------------NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
NVVTWT +I+G+ + E +D F M G+ +E+T++ +LS
Sbjct: 186 LLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLS 245
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC-------------------- 278
AC L G +H V ++++DKL AL DMYAKC
Sbjct: 246 ACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQ 305
Query: 279 ------------GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
G+++ A +F + + +V T+NS+I G G EA+ +F +M+ G
Sbjct: 306 PWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHG 365
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
+ D+ T++ +LTA + G + +G+ + + + VE +V L+D+ + ++EA
Sbjct: 366 LGADNFTMVGLLTASASLGALPQGRALHACIEQRL-VERDVYLGTALLDMYMKCGRVEEA 424
Query: 387 YEVIRNMPMEPNAVLWGSLLTACA 410
+ M + + W +++ A
Sbjct: 425 MVAFKQMSVR-DVHTWSAMIGGLA 447
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 95/239 (39%), Gaps = 40/239 (16%)
Query: 142 GDLRQVKGVHSLVVKSKDF------NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
G +RQ +H+LV S +++SLT I+ + ++ A LFD+M
Sbjct: 10 GSVRQATELHALVTTSGRLLHPPSAAHLLNSLTSCIS-PSDPLHLRYALSLFDRMPCSTF 68
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL-GKWVHE 254
+ TA+ I L+R+M V + T + CA GA L G+ +H
Sbjct: 69 LFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHA 128
Query: 255 FVNKNCIILNDKLGAA-LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC-- 311
+ + L A+ + MYA+ G +A R F K+V W ++I GLA G
Sbjct: 129 ACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLD 188
Query: 312 -----------------------------GEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
EAV F M GI PD+VT+I +L+AC
Sbjct: 189 DARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSAC 247
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 278/505 (55%), Gaps = 42/505 (8%)
Query: 49 VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE 108
+H +IKAS + L LI +S AH VF + ++N +I +A
Sbjct: 195 LHGMVIKASLSSDLFI---LNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFAL 251
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIH 165
GL + + L+ +M + P+ T +L AC DL + + S +++ F +
Sbjct: 252 GGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICS-YIENNGFTEHLI 310
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG----------- 214
++ Y G + A+ LF++M+EK++V+WT M++GH K NY E
Sbjct: 311 LNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKW 370
Query: 215 --------------------IDLFRKMRDS-GVEVNELTLVSVLSACANLGASELGKWVH 253
+ LF +M+ S + +E+TL+ L A A LGA + G W+H
Sbjct: 371 TAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIH 430
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
++ K+ I LN L +L DMYAKCG + +A+ VF V K+V W+++IG LA++G G+
Sbjct: 431 VYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGK 490
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
A+ +F M + IKP+ VT +L AC+HAGL+ +G+++F M Y + P ++HY C+
Sbjct: 491 AALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCV 550
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
VD+ RA LL++A I MP+ P A +WG+LL AC+ NVELAE+A + L++LEP
Sbjct: 551 VDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRH---GNVELAELAYQNLLELEP 607
Query: 434 FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHP 493
N G +VL+SNIYA W+ +R+LM++ ++ K P CS I++N +VHEF+VGD HP
Sbjct: 608 CNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHP 667
Query: 494 CSEEIYSMLEYVAISLREECYAARM 518
S++IYS L+ ++ + Y M
Sbjct: 668 FSQKIYSKLDEISEKFKPIGYKPDM 692
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 221/454 (48%), Gaps = 51/454 (11%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKAS--FDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
L + +CT+ +Q KQ+HA +++ S D T S A I S S + YA VFNQI
Sbjct: 76 LEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISS---CSCLIYAKNVFNQI 132
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD-PDSFTYPILLKACGDLRQV--- 147
P+ + +NT+IRGYA + + ++ M+ + + P+ FT+P L KA L+ +
Sbjct: 133 PQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLG 192
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+H +V+K+ +S + L LI FY + G A +F M K+VV+W AMIN
Sbjct: 193 SVLHGMVIKAS-LSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFAL 251
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
+ + LF++M V+ N +T+VSVLSACA E G+W+ ++ N + L
Sbjct: 252 GGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLIL 311
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE------------- 314
A+ DMY KCG I +A +F + EK++ +W +++ G A G +E
Sbjct: 312 NNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWT 371
Query: 315 ------------------AVKMFWQMQMS-GIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
A+ +F +MQ+S KPD+VTLI L A + G I+ G I
Sbjct: 372 AAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHV 431
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+++ + + N L+D+ + L++A EV + + + +W +++ A A G
Sbjct: 432 YIKK-HDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERK-DVYVWSAMIGALAMYGQG 489
Query: 416 -ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
A ++L +E IK N V +NI A
Sbjct: 490 KAALDLFSSMLEAYIK------PNAVTFTNILCA 517
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/344 (47%), Positives = 230/344 (66%), Gaps = 3/344 (0%)
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
S +I Y GDV A LFD++ KNVV+WT +I G VK++ Y E ++ FR+M+ +G
Sbjct: 159 SWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAG 218
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
V + +T+++++SACANLGA LG WVH V K N K+ +L DMYA+CG IE A
Sbjct: 219 VVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELAR 278
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
+VF + ++N+ +WNSII G A++G ++A+ F M+ G++P+ V+ + LTACSHAG
Sbjct: 279 QVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAG 338
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
LI++G +IF +++RD++ P ++HYGCLVDL RA L EA++VI+ MPM PN V+ GSL
Sbjct: 339 LIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSL 398
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L AC + D VELAE M+ ++L P D NYVL SNIYAA +WD A K+RR MKER
Sbjct: 399 LAACRTQGD---VELAEKVMKYQVELYPGGDSNYVLFSNIYAAVGKWDGASKVRREMKER 455
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+ KN S IEI+ +H+F+ GD H ++ IYS LE ++ L
Sbjct: 456 GLQKNLAFSSIEIDSGIHKFVSGDKYHEENDYIYSALELLSFEL 499
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 150/337 (44%), Gaps = 52/337 (15%)
Query: 34 LPLLQKCTH------LVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHL 86
+ LL C H + +H K F ++D + LI+ ++ YA L
Sbjct: 91 ITLLSACAHSPSKTSITFGAALHTHAFKHGF---AMNDVMVGTALIDMYAKCGKLDYARL 147
Query: 87 VFNQIINPSTFAFNTVIRGYAEAG-----------LGHRGIQLYTQMIGN---------- 125
VF+Q+ + ++NT+I GY + G L + + +T +IG
Sbjct: 148 VFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEA 207
Query: 126 ----------GLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLIT 172
G+ PD T ++ AC +L + VH LV+K K+F + L LI
Sbjct: 208 LECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMK-KEFRDNVKVLNSLID 266
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
Y G ++ A+ +FD M+++N+V+W ++I G + + FR M+ G+E N ++
Sbjct: 267 MYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVS 326
Query: 233 LVSVLSACANLGASELGKWVHEFV---NKNCIILNDKLGAALTDMYAKCGYIEEALRVF- 288
S L+AC++ G + G + + ++N + L D+Y++ G ++EA V
Sbjct: 327 YTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHY--GCLVDLYSRAGRLKEAWDVIK 384
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVK-MFWQMQM 324
K+ + N S++ G E A K M +Q+++
Sbjct: 385 KMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVEL 421
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/485 (35%), Positives = 273/485 (56%), Gaps = 36/485 (7%)
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
+S + L++ + I A +F++ N + +NT++ Y + + +M
Sbjct: 264 LSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEM 323
Query: 123 IGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKS---------------------- 157
+ G PD T + AC GDL K H+ V+++
Sbjct: 324 LQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKR 383
Query: 158 ----KDF----NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
K F N + + LI GD++ A +FD+M E+++V+W MI V+
Sbjct: 384 EAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVS 443
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ E I+LFR+M++ G+ + +T+V + SAC LGA +L KWV ++ KN I ++ +LG
Sbjct: 444 MFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGT 503
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DM+++CG A+ VFK + +++V W + IG +A+ G E A+++F +M +KP
Sbjct: 504 ALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKP 563
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
DDV +A+LTACSH G +++G+++F++M + + + P++ HYGC+VDLL RA LL+EA ++
Sbjct: 564 DDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDL 623
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I++MP+EPN V+WGSLL AC NVELA A E+L +L P G +VL+SNIYA+
Sbjct: 624 IQSMPIEPNDVVWGSLLAACRKHK---NVELAHYAAEKLTQLAPERVGIHVLLSNIYASA 680
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+W D ++R MKE+ + K PG S IE+ ++HEF GD H + I MLE + L
Sbjct: 681 GKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRL 740
Query: 510 REECY 514
E Y
Sbjct: 741 SEAGY 745
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 213/428 (49%), Gaps = 29/428 (6%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIK----- 55
M L P+S L S K +N T++ LL C L + KQ+H ++K
Sbjct: 1 MATTLFPSSTLL----VPASLKEANPITRNSSS-KLLVNCKTLKELKQLHCDMMKKGLLC 55
Query: 56 ---ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN--PSTFAFNTVIRGYAEAG 110
AS N+ I+ + +ESL YA F S F +N +IRGYA AG
Sbjct: 56 HKPASNLNKLIASSVQIGTLESL------DYARNAFGDDDGNMASLFMYNCLIRGYASAG 109
Query: 111 LGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSL 167
LG + I LY QM+ G+ PD +T+P LL AC L + VH V+K + S
Sbjct: 110 LGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVS- 168
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
LI FY G V + LFD M E+NVV+WT++ING+ + +E + LF +M ++GVE
Sbjct: 169 NSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVE 228
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
N +T+V V+SACA L ELGK V ++++ + L+ + AL DMY KCG I A ++
Sbjct: 229 PNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQI 288
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
F KN+ +N+I+ H + + + +M G +PD VT+++ + AC+ G +
Sbjct: 289 FDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDL 348
Query: 348 EKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
GK Y +R + N+ + ++D+ + + A +V +MP V W SL+
Sbjct: 349 SVGKSSHAYVLRNGLEGWDNISN--AIIDMYMKCGKREAACKVFEHMP-NKTVVTWNSLI 405
Query: 407 TACASADD 414
D
Sbjct: 406 AGLVRDGD 413
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 185/396 (46%), Gaps = 44/396 (11%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL C+ ++ QVH ++K + L I ++ +F+ ++
Sbjct: 136 LLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSL---IHFYAECGKVDLGRKLFDGML 192
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
+ ++ ++I GY+ L + L+ QM G++P+ T ++ AC L+ + K
Sbjct: 193 ERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKK 252
Query: 150 VHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
V S + + + ++++ + L+ Y GD+ +A+ +FD+ KN+V + +++ +V
Sbjct: 253 VCSYISELGMELSTIM--VNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHH 310
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ + + + +M G +++T++S ++ACA LG +GK H +V +N + D +
Sbjct: 311 EWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNIS 370
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG------------------ 310
A+ DMY KCG E A +VF+ + K V TWNS+I GL G
Sbjct: 371 NAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLV 430
Query: 311 -------------CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
EEA+++F +MQ GI D VT++ + +AC + G ++ K + +
Sbjct: 431 SWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYI 490
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
++ + +++ LVD+ R A V + M
Sbjct: 491 EKN-DIHVDLQLGTALVDMFSRCGDPSSAMHVFKRM 525
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/473 (36%), Positives = 280/473 (59%), Gaps = 13/473 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQII 92
+ LL +C ++ +QVHA ++ N T+ D +A KL+ + I A+ +F+ +
Sbjct: 7 IDLLLRCRNVFHIRQVHAHVVA----NGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLT 62
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKG 149
+ ++ ++ G+A+AG + +++ G+ PD++T P +++ C DL+ +
Sbjct: 63 MRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRV 122
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H +V+K + L+ Y V+ AQ LF++M K++VTWT MI +
Sbjct: 123 IHDVVLKHGLLSDHF-VCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN 181
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
Y E + LF +MR+ GV +++ +V+V++ACA LGA ++ ++++ +N L+ LG
Sbjct: 182 AY-ESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGT 240
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
A+ DMYAKCG +E A VF + EKNV +W+++I HG G++A+ +F M I P
Sbjct: 241 AMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILP 300
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+ VT +++L ACSHAGLIE+G F +M ++ V P+VKHY C+VDLL RA LDEA +
Sbjct: 301 NRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRL 360
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I M +E + LW +LL AC + +ELAE A L++L+P N G+YVL+SNIYA
Sbjct: 361 IEAMTVEKDERLWSALLGACRIH---SKMELAEKAANSLLELQPQNPGHYVLLSNIYAKA 417
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
+W+ K R +M +R + K PG + IE+++ ++F VGD HP S+EIY ML
Sbjct: 418 GKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEML 470
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/505 (36%), Positives = 293/505 (58%), Gaps = 32/505 (6%)
Query: 35 PLLQKCTHLVQF----------KQVHAQIIKASFDNRTISDTQLAKLIE---SLVNSSQI 81
P L+ C L++ KQ+HA+ ++A S LAK + + + + +
Sbjct: 10 PALRHCVALLRLHLAAPSLAAAKQIHARALRAGVPT---SHPLLAKHLLFHLAALRAPPL 66
Query: 82 AYAHLVFNQII--NP-STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
YA V ++++ P F NTV+R A + ++L+ + + PD+ TYP L+
Sbjct: 67 RYAVAVLSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELHRRRLAL---PDTHTYPPLI 123
Query: 139 KACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT--EK 193
+AC L R+ + +H+ K+ F +++ L+ Y G +SA +FD+M +
Sbjct: 124 QACARLLALREGECLHAEAAKN-GFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGR 182
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
N+V+W +M+N E + +F +M + T+VSVL+ACA GA LG+ VH
Sbjct: 183 NLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVH 242
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHGCG 312
+V K ++ N + AL D+YAKCG + +A R+F+ + L + V +W S+I GLA +G G
Sbjct: 243 VYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFG 302
Query: 313 EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC 372
+EA+++F M+ + P ++T++ VL ACSH GL++ G F M+ DY + P ++H GC
Sbjct: 303 KEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGC 362
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLE 432
+VDLL RA ++EAY+ I MP+EPNAV+W +LL +CA +EL ++A ERL++L+
Sbjct: 363 MVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHK---KLELGKVAWERLVELD 419
Query: 433 PFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRH 492
P + G+YVL+SN+YAA W D +R+ M + + KNPG S++E+ + V+EF++GD H
Sbjct: 420 PGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSH 479
Query: 493 PCSEEIYSMLEYVAISLREECYAAR 517
P SE+IY ML +A LR E Y R
Sbjct: 480 PESEQIYEMLAEIAERLRREGYIPR 504
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 17/301 (5%)
Query: 21 HKNSNTATKSHHHLPLLQKCTHLVQFKQ---VHAQIIKASFDNRTISDTQLAKLIESLVN 77
H+ +H + PL+Q C L+ ++ +HA+ K F L L +
Sbjct: 107 HRRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGA--- 163
Query: 78 SSQIAYAHLVFNQ--IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYP 135
AH VF++ + + ++N+++ +A G + + ++ +M+G PD FT
Sbjct: 164 CGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIV 223
Query: 136 ILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM-T 191
+L AC G L + VH V K + H LI Y G V A+ +F++M
Sbjct: 224 SVLTACAEFGALALGRRVHVYVEKVGLVENS-HVSNALIDLYAKCGSVNDARRIFEEMGL 282
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+ VV+WT++I G +E ++LF M + E+T+V VL AC++ G + G
Sbjct: 283 GRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFR 342
Query: 252 VHEFVNKNCIILN--DKLGAALTDMYAKCGYIEEAL-RVFKIVLEKNVCTWNSIIGGLAI 308
+ + ++ I + LG + D+ + G +EEA + + LE N W +++G A+
Sbjct: 343 YFDRMKEDYGISPRIEHLG-CMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAM 401
Query: 309 H 309
H
Sbjct: 402 H 402
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/464 (36%), Positives = 262/464 (56%), Gaps = 18/464 (3%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD + D +I ++ A +FN+ F + ++ GY + G+
Sbjct: 224 FDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEAR 283
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSV----IHSLTRLIT 172
+ + +M + +Y +L ++ +V+ + F ++ I S +IT
Sbjct: 284 KYFDEMPVK----NEISYNAMLAGYVQYKK------MVIAGELFEAMPCRNISSWNTMIT 333
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
Y G + A+ LFD M +++ V+W A+I+G+ + +Y E +++F +M+ G N T
Sbjct: 334 GYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRST 393
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
LS CA++ A ELGK VH V K +G AL MY KCG +EA VF+ +
Sbjct: 394 FSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIE 453
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
EK+V +WN++I G A HG G +A+ +F M+ +G+KPD++T++ VL+ACSH+GLI++G E
Sbjct: 454 EKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTE 513
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
FY+M RDY V+P KHY C++DLL RA L+EA ++RNMP +P A WG+LL A +
Sbjct: 514 YFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGA---S 570
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
N EL E A E + K+EP N G YVL+SN+YAA +W D GKMR M+E + K G
Sbjct: 571 RIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTG 630
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
S +E+ + +H F VGD HP + IY+ LE + + +R E Y +
Sbjct: 631 YSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVS 674
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 141/348 (40%), Gaps = 70/348 (20%)
Query: 70 KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP 129
K I S + + A VFN + S+ ++N +I GY L+ +M +
Sbjct: 51 KAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP----ER 106
Query: 130 DSFTYPILLKACGDLRQVKGVHSL--VVKSKD-----------------------FNSVI 164
D F++ ++L R++ H L ++ KD FN +
Sbjct: 107 DLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMP 166
Query: 165 H----SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
H S L+ Y + G +K A+ LF+ + +++W ++ G+VK+ + LF +
Sbjct: 167 HRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDR 226
Query: 221 M--RD--------SG-VEVNEL----------------TLVSVLSACANLG-ASELGKWV 252
M RD SG +V +L T +++S G E K+
Sbjct: 227 MPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYF 286
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG 312
E KN I N L Y + + A +F+ + +N+ +WN++I G +G
Sbjct: 287 DEMPVKNEISYNAMLAG-----YVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGI 341
Query: 313 EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
+A K+F M + D V+ A+++ + G E+ +F M+RD
Sbjct: 342 AQARKLFDMMP----QRDCVSWAAIISGYAQNGHYEEALNMFVEMKRD 385
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 133/313 (42%), Gaps = 59/313 (18%)
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG 214
VK KD + V + + I+ + G SA +F+ M ++ V++ AMI+G+++ +
Sbjct: 39 VKFKDPDIV--TWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLA 96
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
DLF KM + +L W V + N +LG
Sbjct: 97 RDLFDKMPE----------------------RDLFSWN---VMLTGYVRNRRLG------ 125
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
EA ++F ++ +K+V +WN+++ G A +G +EA ++F +M + ++
Sbjct: 126 --------EAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMP----HRNSISW 173
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+L A H G +++ + +F + + + + CL+ + +L +A ++ MP
Sbjct: 174 NGLLAAYVHNGRLKEARRLF-----ESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMP 228
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFND-GNYVLMSNIYAAKAQWD 453
+ + + W ++++ A D + +RL P D + M + Y D
Sbjct: 229 VR-DVISWNTMISGYAQVGDLSQA-------KRLFNESPIRDVFTWTAMVSGYVQNGMVD 280
Query: 454 DAGKMRRLMKERN 466
+A K M +N
Sbjct: 281 EARKYFDEMPVKN 293
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 112/244 (45%), Gaps = 20/244 (8%)
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
S +I+ Y A+ LFD+M E+++ +W M+ G+V+ + E LF M
Sbjct: 79 SYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKD 138
Query: 226 VEVNELTLVSVLSACANLGASELGKWV-HEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
V ++ ++LS A G + + V ++ ++N I N L A Y G ++EA
Sbjct: 139 V----VSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAA-----YVHNGRLKEA 189
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
R+F+ + +WN ++GG +A ++F +M + D ++ +++ +
Sbjct: 190 RRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVR----DVISWNTMISGYAQV 245
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
G + + K +F + +V + +V + ++DEA + MP++ N + + +
Sbjct: 246 GDLSQAKRLF-----NESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVK-NEISYNA 299
Query: 405 LLTA 408
+L
Sbjct: 300 MLAG 303
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 7/160 (4%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQVH Q++KA F+ L + ++ + A+ VF I ++NT+I GY
Sbjct: 411 KQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDE---ANDVFEGIEEKDVVSWNTMIAGY 467
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-KGVHSLVVKSKDFNSVIH 165
A G G + + L+ M G+ PD T +L AC + +G +D+N
Sbjct: 468 ARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPT 527
Query: 166 S--LTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMI 202
S T +I G ++ A+ L M + +W A++
Sbjct: 528 SKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALL 567
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/400 (41%), Positives = 253/400 (63%), Gaps = 11/400 (2%)
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSV--IHSLTRLIT 172
G ++T I +G D D + L A D+ GV L + D +V I + LI
Sbjct: 29 GKVIHTHFIKSGFDFDVYA----LTALVDMYAKLGVLMLARQVFDEMTVRDIPTWNSLIA 84
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-RDSGVEVNEL 231
Y GD++ A LF M ++VV+WT MI+G+ + Y + +++F KM +D V NE+
Sbjct: 85 GYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKEVRPNEV 144
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KI 290
T+ SV SACA LGA E+G+ + + N ++ N + L +MYA+CG I+ A VF +I
Sbjct: 145 TIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEMYARCGKIDAARHVFNEI 204
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+N+C+WNS++ GLA+HG EA++++ QM GI+PDDVT + ++ AC+H GL+ KG
Sbjct: 205 GKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAKG 264
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
++F +M ++ + P ++HYGC+VDLL RA L EAY+++++MPM+P++V+WG+LL AC+
Sbjct: 265 WQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVKSMPMKPDSVIWGTLLGACS 324
Query: 411 SADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN 470
+NVE AEIA E L ++EP+N GNYV++ NIYA+ +WD K+R+LMK I K
Sbjct: 325 FH---SNVEFAEIAAESLFQVEPWNPGNYVILCNIYASAQRWDGVAKLRKLMKGGQITKA 381
Query: 471 PGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
G SVIE +H+F+V D HP EIY++L ++ ++
Sbjct: 382 AGYSVIEGEGEIHKFIVEDKSHPRHYEIYALLNEISTKMK 421
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 33/218 (15%)
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
G NELT + ACA+ + GK +H K+ + AL DMYAK G + A
Sbjct: 5 GCPPNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLA 64
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF----------WQMQMSG-------- 326
+VF + +++ TWNS+I G + G E A+++F W +SG
Sbjct: 65 RQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYT 124
Query: 327 --------------IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC 372
++P++VT+ +V +AC+ G +E G+ I + RD + N+
Sbjct: 125 KALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERI-ESYARDNGLMKNLYVSNT 183
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
L+++ R +D A V + N W S++ A
Sbjct: 184 LLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLA 221
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 60 NRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTF-AFNTVIRGYAEAGLGHRGIQL 118
N +S+T L+E +I A VFN+I ++N+++ G A G + +QL
Sbjct: 177 NLYVSNT----LLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQL 232
Query: 119 YTQMIGNGLDPDSFTYPILLKAC 141
Y QM+G G++PD T+ L+ AC
Sbjct: 233 YDQMLGEGIEPDDVTFVGLILAC 255
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 290/534 (54%), Gaps = 71/534 (13%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINP 94
++++C+ + A +IK S + D +L + I + + ++ A Q+ P
Sbjct: 34 IIKQCSTPKLLESALAAMIKTSLNQ----DCRLMNQFITACTSFKRLDLAVSTMTQMQEP 89
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA-------------- 140
+ F +N + +G+ R ++LY +M+ + + P S+TY L+KA
Sbjct: 90 NVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAH 149
Query: 141 ----------------------CGDLRQVKGVHSLVVKSKDF------------------ 160
G +R+ + V + + D
Sbjct: 150 IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSA 209
Query: 161 NSVIHSLTR--------LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
NS+ + ++ LI Y G+++ A+ LF+QM K++++WT MI G+ + K YR
Sbjct: 210 NSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYR 269
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E I +F KM + G+ +E+T+ +V+SACA+LG E+GK VH + +N +L+ +G+AL
Sbjct: 270 EAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALV 329
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
DMY+KCG +E AL VF + +KN+ WNSII GLA HG +EA+KMF +M+M +KP+ V
Sbjct: 330 DMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAV 389
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
T ++V TAC+HAGL+++G+ I+ +M DY + NV+HYG +V L +A L+ EA E+I N
Sbjct: 390 TFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGN 449
Query: 393 MPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQW 452
M EPNAV+WG+LL C N+ +AEIA +L+ LEP N G Y L+ ++YA + +W
Sbjct: 450 MEFEPNAVIWGALLDGCRIHK---NLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRW 506
Query: 453 DDAGKMRRLMKERNIVK-NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
D ++R M+E I K PG S I I+ H F D H S+E+ +L+ +
Sbjct: 507 RDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 560
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 281/475 (59%), Gaps = 11/475 (2%)
Query: 41 THLVQFKQVHAQIIKA--SFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTF 97
T LV F + + A +FD + D + LI + + A +F+ + ++
Sbjct: 109 TALVDFYAKNGDMESAVSAFDEMPVKDPIPINCLITGYSKAGDVDKARRLFDGMERRTSA 168
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLV 154
++N++I YA G + L+ +M+ G P++ T + C GDL K V L+
Sbjct: 169 SWNSMIACYAHGGEFREALALFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLI 228
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG 214
+ N ++H T L+ Y + A+ FD+M++++VV W+ MI G+ + E
Sbjct: 229 GEDDLQNVIVH--TALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLES 286
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
++LF +M+ + NE+TLV V+SACA LG+ EL + + + + L LG+AL DM
Sbjct: 287 LELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDM 346
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y +CG++ A VF + +K V TWNS+I GLA++G E+A+ ++ +M +G++P+++T
Sbjct: 347 YTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITF 406
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+A+L AC+HAGL+++G F M+R++ V P V+H C+VDLLC++ L EAY+ I +M
Sbjct: 407 VALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDME 466
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
+EPNAV+W +LL++C + A+VELA++A +L+ +EP N YVL+SNIYA W D
Sbjct: 467 VEPNAVIWTTLLSSCRAH---ADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGD 523
Query: 455 AGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
A ++R LM+ +N+ K S I+++ VH+F+V D HP S EIY ++ + + L
Sbjct: 524 AREIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHPRSAEIYDVIHGLGLLL 578
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 166/368 (45%), Gaps = 52/368 (14%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG- 142
A +F+ + P+ +T + + A H +Q ++ M G S P++ K+C
Sbjct: 23 ARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCAL 82
Query: 143 -----DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS--------------- 182
RQV H+LV + + LT L+ FY GD++S
Sbjct: 83 TASSCQGRQVH-CHALV---RGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIP 138
Query: 183 ----------------AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
A+ LFD M + +W +MI + +RE + LF +M G
Sbjct: 139 INCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGA 198
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
N +T+ SV S CA G + GK V + + ++ + N + AL +MY KC I++A R
Sbjct: 199 RPNAITITSVFSICAKSGDLDTGKRVRDLIGED-DLQNVIVHTALMEMYVKCRAIDDARR 257
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG- 345
F + +++V W+++I G A +G E++++F +M+ + +P++VTL+ V++AC+ G
Sbjct: 258 EFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGS 317
Query: 346 --LIEKGKEIFYNMRRDYKVEPNVKHYG-CLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
L+E+ N R P + G L+D+ R + A V M + + W
Sbjct: 318 DELVEQIGNYAENQRL-----PLTSYLGSALIDMYTRCGHVGRARSVFSRME-QKGVITW 371
Query: 403 GSLLTACA 410
S++ A
Sbjct: 372 NSMIRGLA 379
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 286/485 (58%), Gaps = 15/485 (3%)
Query: 36 LLQKCTHLVQFKQ---VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L KCT+L + KQ +HA I ++F++ + L ++ + A +F+++
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLV---LLNFILNMYAKCGSLEEAQDLFDKMP 167
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKG 149
++ +I GY+++G + L+ +M+ G P+ FT LLKA G +
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQ 227
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H+ +K ++ +H + L+ Y + ++ A+++F+ + KNVV+W A+I GH ++
Sbjct: 228 LHAFSLKY-GYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKG 286
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ LF +M G E T SVL ACA+ G+ E GKWVH V K+ +G
Sbjct: 287 EGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGN 345
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
L DMYAK G I++A +VF+ ++++++ +WNSII G A HG G EA+++F QM + ++P
Sbjct: 346 TLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQP 405
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+++T ++VLTACSH+GL+++G + ++ + + +K+E V H+ +VDLL RA L+EA +
Sbjct: 406 NEITFLSVLTACSHSGLLDEG-QYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKF 464
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I MP++P A +WG+LL AC N++L A E++ +L+P + G +VL+SNIYA+
Sbjct: 465 IEEMPIKPTAAVWGALLGACRMHK---NMDLGVYAAEQIFELDPHDSGPHVLLSNIYASA 521
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+ DA K+R++MKE + K P CS +EI + VH F+ D HP EEI M E ++ +
Sbjct: 522 GRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKI 581
Query: 510 REECY 514
+E Y
Sbjct: 582 KEIGY 586
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 181/345 (52%), Gaps = 11/345 (3%)
Query: 127 LDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSA 183
L+P+ Y +L C LR++K +H+ + +S F + L ++ Y G ++ A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHI-QSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
Q LFD+M K++V+WT +I+G+ + E + LF KM G + NE TL S+L A
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
+ G+ +H F K +N +G++L DMYA+ ++ EA +F + KNV +WN++I
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
G A G GE +++F QM G +P T +VL AC+ +G +E+GK + ++ +
Sbjct: 280 AGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKS-GG 337
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN-VELAE 422
+P L+D+ ++ + +A +V R + ++ + V W S+++ A GA ++L E
Sbjct: 338 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHGLGAEALQLFE 396
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
++ K++P N+ ++ + + D+ LMK+ I
Sbjct: 397 QMLK--AKVQP-NEITFLSVLTACSHSGLLDEGQYYFELMKKHKI 438
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/496 (34%), Positives = 278/496 (56%), Gaps = 38/496 (7%)
Query: 55 KASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
+ +FD + D LI L + L+ +Q ++ ++I Y+ A
Sbjct: 162 RRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAR 221
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLV---------------- 154
+ + M+ +G+ PD T +L AC L+ + + +H LV
Sbjct: 222 EAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALI 281
Query: 155 ---VKSKDF---NSVIHSLTR---------LITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
K DF V +L R +I YC G V A+ LFD+M ++++T+
Sbjct: 282 DMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFN 341
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
+M+ G++ RE + LF MR + V+ T+V++L+ACA+LGA + G+ +H + +
Sbjct: 342 SMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQR 401
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ + LG AL DMY KCG ++EA VF+ + +++V TW ++I GLA +G G+ A++ F
Sbjct: 402 LVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHF 461
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
+QM+ G +P+ V+ IAVLTACSH+ L+ +G+ F MR Y + P ++HYGC++DLL R
Sbjct: 462 YQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGR 521
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
+ LLDEA ++++ MP++PNAV+W S+L+AC +++LA+ A E L+KLEP DG Y
Sbjct: 522 SGLLDEAMDLVKTMPIQPNAVIWASILSACRVHK---HIDLAQCAAEHLLKLEPDEDGVY 578
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
V + NIY QW++A K+R LM+ER + K G S I + VH+F+V D HP EI
Sbjct: 579 VQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEII 638
Query: 500 SMLEYVAISLREECYA 515
+MLE ++ L+ Y+
Sbjct: 639 AMLEEISHRLKSLGYS 654
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 159/339 (46%), Gaps = 50/339 (14%)
Query: 71 LIESLVNSSQ-----IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLG-HRGIQLYTQMIG 124
L+ SLVN + + YA +F+++ PSTF F+T +R + AG HR L+ +M
Sbjct: 38 LLNSLVNCLEPHPLHLRYALHLFDRM-PPSTFLFDTALRACSRAGSDPHRPFLLFRRMRR 96
Query: 125 NGLDPDSFTYPILLKACGDLRQVKGV------HSLVVKSKDFNSVIHSLTRLITFYCNFG 178
G+ PD FT+ L K + + H+ +++ ++ LI Y G
Sbjct: 97 AGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLG 156
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMING-------------------------------HVK 207
A+ FD++ K+ V WT +I+G + +
Sbjct: 157 LAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSR 216
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
RE + F+ M G+ +E+T+++VLSACA L ELG+ +H V + + ++ L
Sbjct: 217 ANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENL 276
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLE-KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
AL DMYAKCG A +VF + +WN+II G HG + A +F +M++
Sbjct: 277 VVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRD 336
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR-DYKVE 364
I +T +++T H+G + + +F +MRR D +V+
Sbjct: 337 I----ITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVD 371
>gi|226530385|ref|NP_001145846.1| CRR4 [Zea mays]
gi|219884683|gb|ACL52716.1| unknown [Zea mays]
gi|414878658|tpg|DAA55789.1| TPA: CRR4 [Zea mays]
Length = 601
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/476 (36%), Positives = 278/476 (58%), Gaps = 12/476 (2%)
Query: 41 THLVQFKQVHAQIIKA--SFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTF 97
T LV F + + A +F+ I D + LI S + A +F+ + ++
Sbjct: 117 TALVDFYAKNGNMDSAVMAFEEMPIKDPIPMNCLITGYSRSGDVEEARRLFDSMPRKTSA 176
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLV 154
++N++I YA G + L+ QM+ G P++ T + C GDL + + V
Sbjct: 177 SWNSMIACYAHGGEFQEALTLFDQMLREGASPNAITITTVFSICAKTGDLETGRRAKAWV 236
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG 214
+ N ++H T L+ Y + A+ FD+M ++VV W+ MI G+ E
Sbjct: 237 SEEDLQNVIVH--TALMEMYVKCRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHES 294
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
++LF +M+ + + NE+TLV VLSACA LG+ ELG+ + ++ + L LG+AL DM
Sbjct: 295 LELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGSYIESQTLPLTSYLGSALIDM 354
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y KCG++ A VF + +K V WNS+I GLA++G E+A+ ++ +M G++P+++T
Sbjct: 355 YTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEITF 414
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYK-VEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
+A+LTAC+HAGL++KG F M+++ + P V+H C+VDLLC++ L EAY+ I +M
Sbjct: 415 LALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVEHCACIVDLLCKSGRLWEAYKFICDM 474
Query: 394 PMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWD 453
+EPNAV+W +LL+AC + A+VELA++A +L+ LEP + YVL+SNIYA W
Sbjct: 475 EVEPNAVIWTTLLSACRA---HADVELAKLAAGKLVVLEPNSSSIYVLLSNIYADAGLWG 531
Query: 454 DAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
D ++R LM+ +N+ K S IE++ VH F+V D HP S EIY++++ + + L
Sbjct: 532 DVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQL 587
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/496 (34%), Positives = 278/496 (56%), Gaps = 38/496 (7%)
Query: 55 KASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
+ +FD + D LI L + L+ +Q ++ ++I Y+ A
Sbjct: 162 RRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAR 221
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLV---------------- 154
+ + M+ +G+ PD T +L AC L+ + + +H LV
Sbjct: 222 EAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALI 281
Query: 155 ---VKSKDF---NSVIHSLTR---------LITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
K DF V +L R +I YC G V A+ LFD+M ++++T+
Sbjct: 282 DMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFN 341
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
+M+ G++ RE + LF MR + V+ T+V++L+ACA+LGA + G+ +H + +
Sbjct: 342 SMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQR 401
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ + LG AL DMY KCG ++EA VF+ + +++V TW ++I GLA +G G+ A++ F
Sbjct: 402 LVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHF 461
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
+QM+ G +P+ V+ IAVLTACSH+ L+ +G+ F MR Y + P ++HYGC++DLL R
Sbjct: 462 YQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGR 521
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
+ LLDEA ++++ MP++PNAV+W S+L+AC +++LA+ A E L+KLEP DG Y
Sbjct: 522 SGLLDEAMDLVKTMPIQPNAVIWASILSACRVHK---HIDLAQCAAEHLLKLEPDEDGVY 578
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
V + NIY QW++A K+R LM+ER + K G S I + VH+F+V D HP EI
Sbjct: 579 VQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEII 638
Query: 500 SMLEYVAISLREECYA 515
+MLE ++ L+ Y+
Sbjct: 639 AMLEEISHRLKSLGYS 654
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 159/339 (46%), Gaps = 50/339 (14%)
Query: 71 LIESLVNSSQ-----IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLG-HRGIQLYTQMIG 124
L+ SLVN + + YA +F+++ PSTF F+T +R + AG HR L+ +M
Sbjct: 38 LLNSLVNCLEPHPLHLRYALHLFDRM-PPSTFLFDTALRACSRAGSDPHRPFLLFRRMRR 96
Query: 125 NGLDPDSFTYPILLKACG------DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG 178
G+ PD FT+ L K L +H+ +++ ++ LI Y G
Sbjct: 97 AGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLG 156
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMING-------------------------------HVK 207
A+ FD++ K+ V WT +I+G + +
Sbjct: 157 LAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSR 216
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
RE + F+ M G+ +E+T+++VLSACA L ELG+ +H V + + ++ L
Sbjct: 217 ANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENL 276
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLE-KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
AL DMYAKCG A +VF + +WN+II G HG + A +F +M++
Sbjct: 277 VVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRD 336
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR-DYKVE 364
I +T +++T H+G + + +F +MRR D +V+
Sbjct: 337 I----ITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVD 371
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 160/484 (33%), Positives = 275/484 (56%), Gaps = 10/484 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP L+ K +H I+A F T LA + + A L+F+ +
Sbjct: 255 LPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYS---KCGSVETARLIFDGMDQ 311
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGV 150
+ ++N+++ GY + G + I ++ +M+ G+DP T L AC GDL + K V
Sbjct: 312 KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFV 371
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H V + S I + LI+ Y V A +F+ + + V+W AMI G+ +
Sbjct: 372 HKFV-DQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGR 430
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E ++ F +M+ G++ + T+VSV+ A A L + KW+H + ++C+ N + A
Sbjct: 431 VSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTA 490
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMY+KCG I A ++F ++ +++V TWN++I G HG G A+ +F +M+ ++P+
Sbjct: 491 LVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPN 550
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
D+T ++V++ACSH+GL+++G F +M++DY +EP++ HYG +VDLL RA + EA++ I
Sbjct: 551 DITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFI 610
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
NMP+ P ++G++L AC N+E+ E A ++L +L P G +VL++NIYA+ +
Sbjct: 611 ENMPISPGITVYGAMLGACKIH---KNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTS 667
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+W ++R+ M+++ + K PGCSV+E+ + VH F G HP S+ IY+ LE + ++
Sbjct: 668 KWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIK 727
Query: 511 EECY 514
Y
Sbjct: 728 AAGY 731
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 191/378 (50%), Gaps = 9/378 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LL+ CT + + Q+ +IK N + T+L L I A VF I +
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKY---GSINEAARVFEPIDDKL 111
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHS 152
++T+++GYA+ + +M + + P + + LLK CGD L++ K +H
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
++ + F + + ++T ++ Y + A +FD+M E+++V+W +I G + +
Sbjct: 172 QLI-TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAK 230
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
+ ++L +M+D G + +TLV+VL A A++G +GK +H + + + AL
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
DMY+KCG +E A +F + +K V +WNS++ G +G E+A+ +F +M GI P V
Sbjct: 291 DMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV 350
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
T++ L AC+ G +E+GK + + + ++ L+ + + + +D A ++ N
Sbjct: 351 TIMEALHACADLGDLERGKFV-HKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNN 409
Query: 393 MPMEPNAVLWGSLLTACA 410
+ + V W +++ A
Sbjct: 410 LNGRTH-VSWNAMILGYA 426
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 289/532 (54%), Gaps = 44/532 (8%)
Query: 12 THFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKL 71
T F S + N + HHL L +C L + +++HA I S + K+
Sbjct: 2 TDFVASRGRYMNRSVC----HHL--LAQCKKLRELQRIHALAIAHGLHPHQQSVS--CKI 53
Query: 72 IESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS 131
+ ++A A +F++I NP +F +++ + + I L+ +++ G PD
Sbjct: 54 FRCYADFGRVADARKLFDEIPNPDLISFTSLMSLHLQLDNQREAISLFARVVAAGHRPDG 113
Query: 132 FTYPILLKA---CGDLRQVKGVHSLVVK-------------------SKDFNSVIHSLTR 169
F L A GD + VH L+ + F S + R
Sbjct: 114 FAVVGALSASSGAGDQVVGRAVHGLIFRLGLDGEVVVGNALIDMYSQCGKFESAVKVFDR 173
Query: 170 L-----ITF------YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
+ +T+ Y V SA FDQ+ ++VV WTA+I GHV+ + ++LF
Sbjct: 174 MSLKDEVTWGSMLHGYIKCAGVDSALSFFDQVPVRSVVAWTALITGHVQGRQPVRALELF 233
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
+M G +T+V VLSACA++GA +LG+ +H + +K LN + AL DMYAK
Sbjct: 234 GRMVLEGHRPTHVTIVGVLSACADIGALDLGRVIHGYGSKCNASLNIIVSNALMDMYAKS 293
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G+IE A VF+ V K+ TW ++I + G G++A+++F M +G+ P+ VT ++VL
Sbjct: 294 GHIEMAFSVFQEVQSKDSFTWTTMISCCTVQGDGKKALELFQDMLRAGVVPNSVTFVSVL 353
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
+ACSH+GLIE+G E+F MR+ YK++P ++HYGC++DLL R LL+EA +I +M +EP+
Sbjct: 354 SACSHSGLIEEGIELFDRMRQLYKIDPLLEHYGCMIDLLGRGGLLEEAEALIADMNVEPD 413
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
V+W SLL+AC N LAEIA + ++K EP +DG YVL+ N+YA+ +W +A +M
Sbjct: 414 IVIWRSLLSACLVR---GNNRLAEIAGKEIVKREPGDDGVYVLLWNMYASSNKWREAREM 470
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
R+ M I K PGCS IEI+ VHEF+V D H EIY LEY++ L+
Sbjct: 471 RQQMLSLKIFKKPGCSWIEIDGAVHEFLVEDKTHDARREIYETLEYMSRQLK 522
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/457 (38%), Positives = 262/457 (57%), Gaps = 41/457 (8%)
Query: 86 LVFNQIINPSTFAFNTVIRGYAE-AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL 144
+V + P+ F +N +I+ Y+ HR LY+Q+ +G P+ T+ L AC L
Sbjct: 1 MVLHHSSKPTLFLYNKLIQAYSSHPQHQHRCFSLYSQIRLHGFLPNQHTFNFLFSACTSL 60
Query: 145 RQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCN------------------------- 176
+ +H+ +KS F + + T L+ Y
Sbjct: 61 SSSSLGQMLHTHFIKS-GFEPDLFAATALLDMYAKVGALELARKLFDEMPVRGVPRWNAM 119
Query: 177 ------FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-RDSGVEVN 229
FGD+ A LF M +NVV WT MI+G+ K Y + + LF M ++ G+ N
Sbjct: 120 MAGLARFGDMDGALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLFLGMEQEKGIMPN 179
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF- 288
+TLVS+L ACANL A E+G+ V + KN N A+ +MY KCG I+ A RVF
Sbjct: 180 AVTLVSILPACANLXALEIGQRVEAYARKNGFFKNXYASNAVLEMYVKCGKIDAAWRVFN 239
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
+I +N+C+WNS++ GLA+HG +A++++ QM G PDDVT + +L AC+ G+++
Sbjct: 240 EIGSLRNLCSWNSMVVGLAVHGECCKALELYDQMLGEGTSPDDVTFVGLLLACTQGGMVK 299
Query: 349 KGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
KG+ IF + + + P ++HYGC+VDLL RA L EAYEVI++M M+P++V+WG+LL A
Sbjct: 300 KGRHIFKSKTTSFYIIPKLEHYGCMVDLLGRAGQLREAYEVIQSMSMKPDSVIWGALLGA 359
Query: 409 CASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIV 468
C+ NVELAEIA E L LEP+N GNYV++SNIYA+ QWD K+R++MK I
Sbjct: 360 CSFH---GNVELAEIAAESLFVLEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKIT 416
Query: 469 KNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
K+ G S IE +H+F+V D HP S EI+++L+ V
Sbjct: 417 KSAGHSFIEEGAQLHKFIVKDRSHPKSNEIFALLDGV 453
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 257/460 (55%), Gaps = 10/460 (2%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD + D +I ++ A +F++ F + ++ GY + G+
Sbjct: 227 FDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAK 286
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN 176
+ +M + + +Y ++ +++ L N I S +IT Y
Sbjct: 287 TFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRN--ISSWNTMITGYGQ 340
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
GD+ A+ FD M +++ V+W A+I G+ + +Y E +++F +++ G +N T
Sbjct: 341 IGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCA 400
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
LS CA++ A ELGK +H K +G AL MY KCG I+EA F+ + EK+V
Sbjct: 401 LSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDV 460
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
+WN+++ G A HG G +A+ +F M+ +G+KPD++T++ VL+ACSH GL+++G E FY+
Sbjct: 461 VSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYS 520
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
M +DY V P KHY C++DLL RA L+EA ++IRNMP +P A WG+LL A
Sbjct: 521 MTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIH---G 577
Query: 417 NVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
N EL E A E + K+EP N G YVL+SN+YAA +W DA KMR M++ + K PG S +
Sbjct: 578 NTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWV 637
Query: 477 EINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
E+ + +H F VGD HP E IY+ LE + + +REE Y +
Sbjct: 638 EVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVS 677
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 149/352 (42%), Gaps = 42/352 (11%)
Query: 70 KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP 129
K I + + + A VFN + S+ ++N +I GY + L+ QM +
Sbjct: 54 KAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP----ER 109
Query: 130 DSFTYPILLKA------CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSA 183
D F++ ++L GD R++ + + KD + S L++ Y G V A
Sbjct: 110 DLFSWNVMLTGYVRNCRLGDARRLFDL----MPEKD----VVSWNSLLSGYAQNGYVDEA 161
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
+ +FD M EKN ++W ++ +V E LF D + ++ L+ L
Sbjct: 162 REVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDL-ISWNCLMGGFVRKKKL 220
Query: 244 GASELGKWVHEFVN-KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
G + +W+ + + ++ I N + YA+ G + +A R+F ++V TW ++
Sbjct: 221 GDA---RWLFDKMPVRDAISWNTMISG-----YAQGGGLSQARRLFDESPTRDVFTWTAM 272
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM--RRD 360
+ G +G +EA F +M + ++V+ A++ ++ +E+F +M R
Sbjct: 273 VSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNI 328
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
+ YG + D+ + D M + + V W +++ A +
Sbjct: 329 SSWNTMITGYGQIGDIAQARKFFD--------MMPQRDCVSWAAIIAGYAQS 372
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 130/327 (39%), Gaps = 47/327 (14%)
Query: 169 RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV 228
+ I+ + G SA +F+ M ++ V++ AMI+G+++ + +LF +M + +
Sbjct: 54 KAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFS 113
Query: 229 NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
+ L + C A L + E K+ + N +L YA+ GY++EA VF
Sbjct: 114 WNVMLTGYVRNCRLGDARRLFDLMPE---KDVVSWN-----SLLSGYAQNGYVDEAREVF 165
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF----------WQMQMSGI----------- 327
+ EKN +WN ++ +G EEA +F W M G
Sbjct: 166 DNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARW 225
Query: 328 ----KP--DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
P D ++ +++ + G + + + +F D +V + +V +
Sbjct: 226 LFDKMPVRDAISWNTMISGYAQGGGLSQARRLF-----DESPTRDVFTWTAMVSGYVQNG 280
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVL 441
+LDEA MP E N V + +++ + +IA E + N ++
Sbjct: 281 MLDEAKTFFDEMP-EKNEVSYNAMIAGY------VQTKKMDIARELFESMPCRNISSWNT 333
Query: 442 MSNIYAAKAQWDDAGKMRRLMKERNIV 468
M Y A K +M +R+ V
Sbjct: 334 MITGYGQIGDIAQARKFFDMMPQRDCV 360
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 258/460 (56%), Gaps = 10/460 (2%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD + D +I ++ A +F++ F + ++ GY + G+
Sbjct: 227 FDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAK 286
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN 176
+ +M + + +Y ++ +++ L N I S +IT Y
Sbjct: 287 TFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRN--ISSWNTMITGYGQ 340
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
GD+ A+ FD M +++ V+W A+I G+ + +Y E +++F +++ G +N T
Sbjct: 341 IGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCA 400
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
LS CA++ A ELGK +H K +G AL MY KCG I+EA F+ + EK+V
Sbjct: 401 LSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDV 460
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
+WN+++ G A HG G +A+ +F M+ +G+KPD++T++ VL+ACSH GL+++G E FY+
Sbjct: 461 VSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYS 520
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
M +DY V P KHY C++DLL RA L+EA ++IRNMP +P A WG+LL A +
Sbjct: 521 MTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGA---SRIHG 577
Query: 417 NVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
N EL E A E + K+EP N G YVL+SN+YAA +W DA KMR M++ + K PG S +
Sbjct: 578 NTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWV 637
Query: 477 EINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
E+ + +H F VGD HP E IY+ LE + + +REE Y +
Sbjct: 638 EVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVS 677
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 143/335 (42%), Gaps = 42/335 (12%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA------ 140
VFN + S+ ++N +I GY + L+ QM + D F++ ++L
Sbjct: 71 VFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP----ERDLFSWNVMLTGYVRNCR 126
Query: 141 CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
GD R++ + + KD + S L++ Y G V A+ +FD M EKN ++W
Sbjct: 127 LGDARRLFDL----MPEKD----VVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNG 178
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN-KN 259
++ +V E LF D + ++ L+ LG + +W+ + + ++
Sbjct: 179 LLAAYVHNGRIEEACLLFESKSDWDL-ISWNCLMGGFVRKKKLGDA---RWLFDKMPVRD 234
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
I N + YA+ G + +A R+F ++V TW +++ G +G +EA F
Sbjct: 235 AISWNTMISG-----YAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFF 289
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM--RRDYKVEPNVKHYGCLVDLL 377
+M + ++V+ A++ ++ +E+F +M R + YG + D+
Sbjct: 290 DEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIA 345
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
+ D M + + V W +++ A +
Sbjct: 346 QARKFFD--------MMPQRDCVSWAAIIAGYAQS 372
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 64/158 (40%), Gaps = 41/158 (25%)
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
D L L + GL++ G E FY M +Y V P KHY C++DLL R L+E
Sbjct: 764 DYWLQFFLLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----- 818
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
G+LL A + N EL E A + K+ P N G
Sbjct: 819 ------------GALLGA---SRIHGNTELGEKAAQMFFKMGPQNSG------------- 850
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
KMR + + K PG S E+ + +H F VG
Sbjct: 851 ----ISKMRDV----GVQKVPGYSWFEVQNKIHTFSVG 880
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 130/327 (39%), Gaps = 47/327 (14%)
Query: 169 RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV 228
+ I+ + G SA +F+ M ++ V++ AMI+G+++ + +LF +M + +
Sbjct: 54 KAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFS 113
Query: 229 NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
+ L + C A L + E K+ + N +L YA+ GY++EA VF
Sbjct: 114 WNVMLTGYVRNCRLGDARRLFDLMPE---KDVVSWN-----SLLSGYAQNGYVDEAREVF 165
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF----------WQMQMSGI----------- 327
+ EKN +WN ++ +G EEA +F W M G
Sbjct: 166 DNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARW 225
Query: 328 ----KP--DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
P D ++ +++ + G + + + +F D +V + +V +
Sbjct: 226 LFDKMPVRDAISWNTMISGYAQGGGLSQARRLF-----DESPTRDVFTWTAMVSGYVQNG 280
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVL 441
+LDEA MP E N V + +++ + +IA E + N ++
Sbjct: 281 MLDEAKTFFDEMP-EKNEVSYNAMIAGY------VQTKKMDIARELFESMPCRNISSWNT 333
Query: 442 MSNIYAAKAQWDDAGKMRRLMKERNIV 468
M Y A K +M +R+ V
Sbjct: 334 MITGYGQIGDIAQARKFFDMMPQRDCV 360
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 184/507 (36%), Positives = 281/507 (55%), Gaps = 73/507 (14%)
Query: 41 THLVQFKQVHAQIIKASFDN-----RTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
T++ KQ+HA +I + R + T ++ S+ I YA +F QI P
Sbjct: 12 TNVGTLKQIHALMIVNGLTSNVGFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQIPQPD 71
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA--------------- 140
TF +NT IRG +++ + LY QM + PD+FT+P +LKA
Sbjct: 72 TFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTGSAVHG 131
Query: 141 -----------------------CGDLRQVKGVHS----------------------LVV 155
CGDL+ + L V
Sbjct: 132 RVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAGYAQRGDLSV 191
Query: 156 KSKDFNSV----IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
K F+ + + S +IT Y G+++SA+ LFD+ K++V+W A+I G+V +
Sbjct: 192 ARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGYVLRNLN 251
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH-EFVNKNCIILNDKLGAA 270
RE ++LF +M G +E+T++S+LSACA+LG E G+ VH + + N L+ LG A
Sbjct: 252 REALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNKGKLSTLLGNA 311
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMYAKCG I +A+RVF ++ +K+V +WNS+I GLA HG EE++ +F +M+M+ + PD
Sbjct: 312 LVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTKVCPD 371
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+VT + VL ACSHAG +++G F+ M+ YK+EP ++H GC+VD+L RA LL EA+ I
Sbjct: 372 EVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFNFI 431
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+M +EPNA++W SLL AC D VELA+ A E+L+++ G+YVL+SN+YA++
Sbjct: 432 ASMKIEPNAIVWRSLLGACKVHGD---VELAKRANEQLLRMRGDQSGDYVLLSNVYASQG 488
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIE 477
+WD A +R+LM + + KN G S +E
Sbjct: 489 EWDGAENVRKLMDDNGVTKNRGSSFVE 515
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 287/468 (61%), Gaps = 43/468 (9%)
Query: 41 THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFN 100
THL Q +HA ++ S+ LA I + ++IAYA +F+Q NP+ F FN
Sbjct: 23 THLTQ---IHAHFLRHGLHQ---SNQILAHFISVCASFNRIAYADRLFSQSHNPNIFLFN 76
Query: 101 TVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK------------ 148
++I+ ++ + H+ + L++ M + + PD +T+ LLK+C +L +
Sbjct: 77 SIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVFRR 136
Query: 149 ----------GVHSLVV---KSKD----FNSVIHS----LTRLITFYCNFGDVKSAQLLF 187
GV L V K +D F+ + H +I +C G+V LF
Sbjct: 137 GFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKTGNVDFGLCLF 196
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
QM+E+++V+W +I+ + + E ++LF++M + G + +E+T+V++L C+ LGA E
Sbjct: 197 RQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALE 256
Query: 248 LGKWVHEFVN-KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
+G+ +H + + K ++ +G +L D Y KCG IE+A +F+ + K+V +WN+II G
Sbjct: 257 VGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIILGF 316
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
A++G GE A+ +F +M+ +KP+D T +AVLTAC H+GL+EKG+E+F +M DY+++P
Sbjct: 317 ALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPK 376
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
++H+GC+VDLL R ++EA+++I++MPM+PNA LWG++L AC + N++LAE+A++
Sbjct: 377 LEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTH---GNLKLAEMAVK 433
Query: 427 RLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
LI LEP+N GNYVL+SN+ A + +W++ +R+ M+E+++ K PG S
Sbjct: 434 ELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 481
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/464 (37%), Positives = 276/464 (59%), Gaps = 16/464 (3%)
Query: 49 VHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
VH ++K+ F+ D+ + LI N + A +F+ + ++N +I GY
Sbjct: 22 VHTHVVKSGFE----CDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYV 77
Query: 108 EAG-LGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHS 166
+ G +GH + ++ +M+ D ++ ++ + ++ L + + N V S
Sbjct: 78 KRGEMGHTRM-VFDRMVCR----DVISWNTIINGYAIVGKIDEAKRLFDEMPERNLV--S 130
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
+++ + G+V+ A LF +M ++VV+W +M+ + + E + LF +MR GV
Sbjct: 131 WNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV 190
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
+ E T+VS+LSACA+LGA + G +H ++N N I +N +G AL DMYAKCG I A +
Sbjct: 191 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 250
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF + K+V WN+II G+AIHG +EA ++F +M+ + ++P+D+T +A+L+ACSHAG+
Sbjct: 251 VFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGM 310
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+++G+++ M Y +EP V+HY C++DLL RA LL+EA E+I MPMEPN G+LL
Sbjct: 311 VDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALL 370
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
C N EL E+ +RLI L+P + G Y+L+SNIYAA +WDDA K+R LMK
Sbjct: 371 GGCRIH---GNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNG 427
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
I K PG SVIE+ +VH F+ GD HP S +IY L + L+
Sbjct: 428 ISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLK 471
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 146/283 (51%), Gaps = 16/283 (5%)
Query: 132 FTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
TYP ++KAC + VH+ VVKS F + + LI Y N D+ +A+ LF
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKS-GFECDSYIVNSLIHLYANGKDLGAAKQLFS 59
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA-SE 247
++++VV+W AMI+G+VK+ +F +M V + ++ ++++ A +G E
Sbjct: 60 LCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRM----VCRDVISWNTIINGYAIVGKIDE 115
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
+ E +N + N L + KCG +EEA +F + ++V +WNS++ A
Sbjct: 116 AKRLFDEMPERNLVSWNSMLSG-----FVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYA 170
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
G EA+ +F QM+ G+KP + T++++L+AC+H G ++KG + + D ++E N
Sbjct: 171 QCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHL-HTYINDNRIEVNS 229
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
LVD+ + + A +V M + + + W +++ A
Sbjct: 230 IVGTALVDMYAKCGKISLATQVFNAMESK-DVLAWNTIIAGMA 271
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI 290
+T V+ AC + G VH V K+ + + +L +YA + A ++F +
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+++V +WN++I G G +F +M + D ++ ++ + G I++
Sbjct: 61 CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRM----VCRDVISWNTIINGYAIVGKIDEA 116
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
K +F D E N+ + ++ + ++EA+ + MP + V W S+L AC
Sbjct: 117 KRLF-----DEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCR-DVVSWNSML-ACY 169
Query: 411 SADDGANVELAEIAMERLIKLEP 433
+ N LA R + ++P
Sbjct: 170 AQCGKPNEALALFDQMRAVGVKP 192
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 280/475 (58%), Gaps = 11/475 (2%)
Query: 41 THLVQFKQVHAQIIKAS--FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTF 97
T LV F + + A FD + D + LI + + A +F+ + ++
Sbjct: 158 TALVDFYAKNGDMESAVSVFDEMPVKDPIPINCLITGYSKAGDVDKARRLFDGMERRTSA 217
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLV 154
++N++I YA G + L+ +M+ G P++ T + C GDL K V L+
Sbjct: 218 SWNSMIACYAHGGEFREALTLFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLI 277
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG 214
+ N ++H T L+ Y + A+ FD+M++++VV W+ MI G+ + E
Sbjct: 278 GEDDLQNVIVH--TALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLES 335
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
++LF +M+ + NE+TLV V+SACA LG+ EL + + + + L LG+AL DM
Sbjct: 336 LELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDM 395
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y +CG++ A VF + +K V TWNS+I GLA++G E+A+ ++ +M +G++P+++T
Sbjct: 396 YTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITF 455
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+A+L AC+HAGL+++G F M+R++ V P V+H C+VDLLC++ L EAY+ I +M
Sbjct: 456 VALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDME 515
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
+EPNAV+W +LL++C + A+VELA++A +L+ +EP N YVL+SNIYA W D
Sbjct: 516 VEPNAVIWTTLLSSCRA---HADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGD 572
Query: 455 AGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
A ++R LM+ +N+ K S I+++ VH+F+V D HP S EIY ++ + + L
Sbjct: 573 AREIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHPRSAEIYDVIHGLGLLL 627
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 167/365 (45%), Gaps = 52/365 (14%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---- 142
+F+ + P+ +T + + A H +Q ++ M G S P++ K+C
Sbjct: 75 LFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCALTAS 134
Query: 143 --DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVV---- 196
RQV H+LV + + LT L+ FY GD++SA +FD+M K+ +
Sbjct: 135 SCQGRQVH-CHALV---RGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKDPIPINC 190
Query: 197 ---------------------------TWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
+W +MI + +RE + LF +M G N
Sbjct: 191 LITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPN 250
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
+T+ SV S CA G + GK V + + ++ + N + AL +MY KC I++A R F
Sbjct: 251 AITITSVFSICAKSGDLDTGKRVRDLIGED-DLQNVIVHTALMEMYVKCRAIDDARREFD 309
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG---L 346
+ +++V W+++I G A +G E++++F +M+ + +P++VTL+ V++AC+ G L
Sbjct: 310 RMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDEL 369
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYG-CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
+E+ N R P + G L+D+ R + A V M + + W S+
Sbjct: 370 VEQIGNYAENQRL-----PLTSYLGSALIDMYTRCGHVGRARSVFSRME-QKGVITWNSM 423
Query: 406 LTACA 410
+ A
Sbjct: 424 IRGLA 428
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 291/522 (55%), Gaps = 52/522 (9%)
Query: 37 LQKCTHLVQFK---QVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQII 92
L C L+ QVHA + K+ R +D + + LI+ +A A VF+ +I
Sbjct: 154 LSACAGLMDLNMGTQVHALVSKS----RYSTDVYMGSALIDMYSKCGSVACAEEVFSGMI 209
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---G 149
+ +N++I Y + G ++++ +M+ +GL+PD T ++ AC L +K
Sbjct: 210 ERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQ 269
Query: 150 VHSLVVKSKDF-------NSVIH------------------------SLTRLITFYCNFG 178
+H+ VVK+ F N+++ S T +++ Y
Sbjct: 270 IHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAA 329
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
VK+A+ +F +MT++NVV+W A+I G+ + E + LFR ++ + T ++LS
Sbjct: 330 SVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLS 389
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDK------LGAALTDMYAKCGYIEEALRVFKIVL 292
ACANL LG+ H V K +G +L DMY KCG IE+ RVF+ +
Sbjct: 390 ACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMK 449
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
E++ +WN+II G A +G G EA+++F +M + G KPD VT+I VL ACSHAGL+E+G+
Sbjct: 450 ERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRH 509
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
F++M ++ + P HY C+VDLL RA L+EA +I MP+ P+AV+WGSLL AC
Sbjct: 510 YFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVH 568
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
N+E+ + A E+L++++P+N G YVL+SN+YA +W D ++R+LM+++ + K PG
Sbjct: 569 ---GNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPG 625
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
CS IE+ VH F+V D HP ++IYS+L+ + ++ Y
Sbjct: 626 CSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGY 667
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 187/386 (48%), Gaps = 42/386 (10%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI L S + A +F + P ++N+++ G+A+ ++ + +M +
Sbjct: 87 LISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLN 146
Query: 131 SFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
+++ L AC DL VH+LV KS+ +++ ++ + LI Y G V A+ +F
Sbjct: 147 EYSFGSALSACAGLMDLNMGTQVHALVSKSR-YSTDVYMGSALIDMYSKCGSVACAEEVF 205
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
M E+N+VTW ++I + + E +++F +M DSG+E +E+TL SV+SACA+L A +
Sbjct: 206 SGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALK 265
Query: 248 LGKWVHEFVNKNCIILND-KLGAALTDMYAKCGYIEEALRV------------------- 287
G +H V K +D LG AL DMYAKC + EA RV
Sbjct: 266 EGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGY 325
Query: 288 ------------FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
F + ++NV +WN++I G +G EEA+++F ++ I P T
Sbjct: 326 ARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFG 385
Query: 336 AVLTACSHAGLIEKGKEIFYN-MRRDYK----VEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+L+AC++ + G++ + +++ ++ E ++ L+D+ + +++ V
Sbjct: 386 NLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVF 445
Query: 391 RNMPMEPNAVLWGSLLTACASADDGA 416
M E + V W +++ A GA
Sbjct: 446 EKMK-ERDCVSWNAIIVGYAQNGYGA 470
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 182/373 (48%), Gaps = 42/373 (11%)
Query: 129 PDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL 185
P+S + LL +C R +G VH+ ++ ++ F+ I RLI Y + A+
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQ-FSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 186 LFDQMTEKNVVTWTA-------------------------------MINGHVKQKNYREG 214
LFD+M ++N TW + M++G + + E
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
++ F KM +NE + S LSACA L +G VH V+K+ + +G+AL DM
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y+KCG + A VF ++E+N+ TWNS+I +G EA+++F +M SG++PD+VTL
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+V++AC+ +++G +I + + K ++ LVD+ + ++EA V M
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
+ N V S+++ A A A+V+ A ++ + N ++ + Y + ++
Sbjct: 312 IR-NVVSETSMVSGYARA---ASVKAARFMFSKMTQR---NVVSWNALIAGYTQNGENEE 364
Query: 455 AGKMRRLMKERNI 467
A ++ RL+K +I
Sbjct: 365 ALRLFRLLKRESI 377
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 114/285 (40%), Gaps = 64/285 (22%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQL---AKLIESLVNSSQIAYAHLVFN 89
LL C +L +Q H ++K F+ ++ +++ + LI+ + I VF
Sbjct: 387 LLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFE 446
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG 149
++ ++N +I GYA+ G G +Q++ +M+ G PD T +L AC
Sbjct: 447 KMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACS------- 499
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVT----WTAMINGH 205
+ G V+ + F M E ++ +T M++
Sbjct: 500 --------------------------HAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLL 533
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV------NKN 259
+ E +L M V + + S+L+AC G E+GK E + N
Sbjct: 534 GRAGCLNEAKNLIEAM---PVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSG 590
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV-----CTW 299
+L L++MYA+ G + +RV K++ ++ V C+W
Sbjct: 591 PYVL-------LSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSW 628
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/485 (35%), Positives = 271/485 (55%), Gaps = 53/485 (10%)
Query: 28 TKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLV 87
TK+ HLP Q+HA ++ + S+ L+ + + QI YA +
Sbjct: 19 TKTQTHLP------------QIHAHFLRHGLHH---SNQILSHFVSVCTSLHQIPYATTI 63
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDPDSFTYPILLKACGDLRQ 146
FN +P+ FN++I+ ++ H+ + M + + + PD+FT+P LLKA LR
Sbjct: 64 FNHTHHPNILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRD 123
Query: 147 -------------------------VKGVHSLVVKSKDFNSVIHSLTR--------LITF 173
+ V+S K +D N V + +I
Sbjct: 124 YDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMING 183
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
+C GD++ LF +M +++VV+W MI+ ++K E +FR+M + G E ++ TL
Sbjct: 184 FCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATL 243
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILN-DKLGAALTDMYAKCGYIEEALRVFKIVL 292
V+VL CA LG + G+W+H + + ++ +G +L D Y KCG +E A +VF +
Sbjct: 244 VTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMT 303
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
+KNV +WN++I GL ++G GE V++F +M G+ P D T + VL C+HAG ++KG+E
Sbjct: 304 KKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGRE 363
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
IF +M +K+ P ++HYGC+VDLL R + EAY++IRNMP+ PNA LWG+LL+AC +
Sbjct: 364 IFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTH 423
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
D E+AEIA + L++LEP N GNYVL+SN+YA + +W++ K+R LM+ I KNPG
Sbjct: 424 GD---REVAEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKNPG 480
Query: 473 CSVIE 477
S ++
Sbjct: 481 QSALQ 485
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/483 (36%), Positives = 265/483 (54%), Gaps = 14/483 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP + + L Q+ IK F + + L LI ++ A L+F +I
Sbjct: 38 LPAVAELQELKLGMQILCLAIKCGFYSHV---SLLTGLISLFSKCGEVEIARLLFGEIRK 94
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL---KACGDLRQVKGV 150
+ N +I G+ G ++L+ +++ +G S T L+ G +
Sbjct: 95 KDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCI 154
Query: 151 HSLVVKSKDFNSVIHSL--TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
H VK V HS T L T YC ++ A+ LFD+ EK + +W AMI+G +
Sbjct: 155 HGFCVK---LGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQN 211
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
I LF+ M+ + V N +T+ S+LSACA +GA LG+WVH + N N +
Sbjct: 212 GLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVS 271
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
AL DMYAKCG I A +F ++ EKN TWN++I G +HG G+EA+K+F+ M S +K
Sbjct: 272 TALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVK 331
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
P +T ++VL ACSHAGL+++G IF+ M D+ EP +HY C+VD+L RA L +A E
Sbjct: 332 PTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALE 391
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
I+ MP+EP +WG+LL AC D LA +A E+L +L+P N G YVLMSNIY+
Sbjct: 392 FIKAMPVEPGPPVWGALLGACMIHKD---TNLAHVASEKLFELDPENIGYYVLMSNIYSV 448
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
+ ++ A +R++ K++ + K PGC++IEI V H F GD HP S+ IY+ L+ +
Sbjct: 449 ERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGK 508
Query: 509 LRE 511
+ E
Sbjct: 509 MTE 511
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/522 (33%), Positives = 290/522 (55%), Gaps = 51/522 (9%)
Query: 37 LQKCTHLVQFK---QVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQII 92
L C L Q+HA I K+ R + D + + L++ +A A F+ +
Sbjct: 158 LSACAGLTDLNMGIQIHALISKS----RYLLDVYMGSALVDMYSKCGVVACAQRAFDGMA 213
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKG 149
+ ++N++I Y + G + ++++ M+ NG++PD T ++ AC +R+
Sbjct: 214 VRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQ 273
Query: 150 VHSLVVKSKDF-------NSVIH------------------------SLTRLITFYCNFG 178
+H+ VVK + N+++ S T ++ Y
Sbjct: 274 IHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAA 333
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
VK+A+L+F M EKNVV+W A+I G+ + E + LF ++ + T ++L+
Sbjct: 334 SVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLN 393
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDK------LGAALTDMYAKCGYIEEALRVFKIVL 292
ACANL +LG+ H + K+ +G +L DMY KCG +E+ VF+ ++
Sbjct: 394 ACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMV 453
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
E++V +WN++I G A +G G A+++F +M +SG KPD VT+I VL+ACSHAGL+E+G+
Sbjct: 454 ERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRR 513
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
F++MR + + P H+ C+VDLL RA LDEA ++I+ MPM+P+ V+WGSLL AC
Sbjct: 514 YFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVH 573
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
N+EL + E+L++++P N G YVL+SN+YA +W D ++R+ M++R ++K PG
Sbjct: 574 ---GNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPG 630
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
CS IEI VH FMV D RHP ++I+ +L+++ ++ Y
Sbjct: 631 CSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGY 672
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 176/347 (50%), Gaps = 22/347 (6%)
Query: 91 IINPSTFA--FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA---CGDLR 145
++ S FA ++ +R +++G+ R +++ ++I + F L+ A CG
Sbjct: 16 FLDSSPFAKLLDSCVR--SKSGIDAR--RIHARIIKTQFSSEIFIQNRLVDAYGKCGYFE 71
Query: 146 QVKGVHSLVVKSKDF--NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
+ V + + F N+V+ LT+ FG + A +F M E + +W AM++
Sbjct: 72 DARKVFDRMPQRNTFSYNAVLSVLTK-------FGKLDEAFNVFKSMPEPDQCSWNAMVS 124
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
G + + E + F M +NE + S LSACA L +G +H ++K+ +L
Sbjct: 125 GFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLL 184
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+ +G+AL DMY+KCG + A R F + +N+ +WNS+I +G +A+++F M
Sbjct: 185 DVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMM 244
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
+G++PD++TL +V++AC+ I +G +I + + K ++ LVD+ + R +
Sbjct: 245 DNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRV 304
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
+EA V MP+ N V S++ A A A+V+ A + +++
Sbjct: 305 NEARLVFDRMPLR-NVVSETSMVCGYARA---ASVKAARLMFSNMME 347
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 194/453 (42%), Gaps = 73/453 (16%)
Query: 36 LLQKCTHL---VQFKQVHAQIIKASFDNRTISDTQLA-------------KLIESLVNSS 79
LL C + +++HA+IIK F + +L K+ + + +
Sbjct: 25 LLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRN 84
Query: 80 QIAY---------------AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
+Y A VF + P ++N ++ G+A+ ++ + M
Sbjct: 85 TFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHS 144
Query: 125 NGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
+ +++ L AC DL +H+L+ KS+ V + L+ Y G V
Sbjct: 145 EDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMG-SALVDMYSKCGVVA 203
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
AQ FD M +N+V+W ++I + + + +++F M D+GVE +E+TL SV+SACA
Sbjct: 204 CAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACA 263
Query: 242 NLGASELGKWVHEFVNKNCIILND-KLGAALTDMYAKCGYIEEALRVFKI---------- 290
+ A G +H V K ND LG AL DMYAKC + EA VF
Sbjct: 264 SWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSET 323
Query: 291 ---------------------VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
++EKNV +WN++I G +G EEAV++F ++ I P
Sbjct: 324 SMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWP 383
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRR-----DYKVEPNVKHYGCLVDLLCRARLLD 384
T +L AC++ ++ G++ + + E ++ L+D+ + +++
Sbjct: 384 THYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVE 443
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ V M +E + V W +++ A G N
Sbjct: 444 DGCLVFERM-VERDVVSWNAMIVGYAQNGYGTN 475
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 43/278 (15%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQL---AKLIESLVNSSQIAYAHLVFN 89
LL C +L K Q H QI+K F ++ ++ + LI+ + + LVF
Sbjct: 391 LLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFE 450
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG 149
+++ ++N +I GYA+ G G ++++ +M+ +G PD T +L AC
Sbjct: 451 RMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACS------- 503
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
H+ +V+ HS+ +L M + +T M++ +
Sbjct: 504 -HAGLVEEG--RRYFHSM--------------RTELGLAPMKDH----FTCMVDLLGRAG 542
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E DL + M ++ + + S+L+AC G ELGK+V E + + LN
Sbjct: 543 CLDEANDLIQTM---PMQPDNVVWGSLLAACKVHGNIELGKYVAEKLME-IDPLNSGPYV 598
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNV-----CTWNSI 302
L++MYA+ G ++ +RV K + ++ V C+W I
Sbjct: 599 LLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEI 636
>gi|195651407|gb|ACG45171.1| CRR4 [Zea mays]
Length = 601
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/476 (36%), Positives = 278/476 (58%), Gaps = 12/476 (2%)
Query: 41 THLVQFKQVHAQIIKA--SFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTF 97
T LV F + + A +F+ I D + LI S + A +F+ + ++
Sbjct: 117 TALVDFYAKNGNMDSAVMAFEEMPIKDPIPMNCLIIGYSRSGDVEEARRLFDSMPRKTSA 176
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLV 154
++N++I YA G + L+ QM+ G P++ T + C GDL + + V
Sbjct: 177 SWNSMIACYAHGGEFQEALTLFDQMLREGASPNAITITTVFSICAKTGDLETGRRAKAWV 236
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG 214
+ N ++H T L+ Y + A+ FD+M ++VV W+ MI G+ E
Sbjct: 237 SEEDLQNVIVH--TALMEMYVKCRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHES 294
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
++LF +M+ + + NE+TLV VLSACA LG+ ELG+ + ++ + L LG+AL DM
Sbjct: 295 LELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGSYIESQTLPLTSYLGSALIDM 354
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y KCG++ A VF + +K V WNS+I GLA++G E+A+ ++ +M G++P+++T
Sbjct: 355 YTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEITF 414
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYK-VEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
+A+LTAC+HAGL++KG F M+++ + P V+H C+VDLLC++ L EAY+ I +M
Sbjct: 415 LALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVEHCACIVDLLCKSGRLWEAYKFICDM 474
Query: 394 PMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWD 453
+EPNAV+W +LL+AC + A+VELA++A +L+ LEP + YVL+SNIYA W
Sbjct: 475 EVEPNAVIWTTLLSACRA---HADVELAKLAAGKLVVLEPNSSSIYVLLSNIYADAGLWG 531
Query: 454 DAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
D ++R LM+ +N+ K S IE++ VH F+V D HP S EIY++++ + + L
Sbjct: 532 DVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQL 587
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 182/505 (36%), Positives = 287/505 (56%), Gaps = 13/505 (2%)
Query: 15 TNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIES 74
T A H S H L LL++ + Q A ++K+ + T+L +
Sbjct: 12 TAPAWCHPPSAARAAEQHCLHLLERSSAPAAVLQSLAFLLKSGLHANPLVLTRLFASSAA 71
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH---RGIQLYTQMIGNGLDPDS 131
+ + + F NT+IR +A + L R + M+ + + P+
Sbjct: 72 AAPALLEPLVAALLRPSVPIDAFLVNTLIRAHAASPLPSARLRAAAFFPLMLRSAVLPNK 131
Query: 132 FTYPILLKACGDLRQVKGV----HSLVVKSKDFNSVIHSLTRLITFYCNFGD--VKSAQL 185
FT+P LLKAC L GV H+ +K F + + LI Y FG + A+
Sbjct: 132 FTFPFLLKACAALPGFPGVGLQAHAAALKF-GFATDQYVSNTLIHMYSCFGGEFLGDARN 190
Query: 186 LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA 245
+FD+M + +VVTW+AMI G+V+ + + LFR+M+ SGV +E+T++ VL+A A+LGA
Sbjct: 191 VFDRMDKSSVVTWSAMIGGYVRGGLSSDAVGLFREMQASGVRPDEVTVIGVLAAAADLGA 250
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
EL +WV FV + I + L AL D AKCG ++ A+ VF+ + E+ V +W S+I
Sbjct: 251 LELARWVGRFVEREGIGKSVTLCNALIDALAKCGDVDGAVAVFQGMEERTVVSWTSVIDA 310
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
LA+ G G+EAV +F M+ +G++PDDV I VLTACSHAG++++G F +M+ +Y ++P
Sbjct: 311 LAMEGRGKEAVAVFEAMKTAGVRPDDVVFIGVLTACSHAGMVDEGYGYFDSMKMEYGIDP 370
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAM 425
++HYGC+VD+ RA +++ A E I MPM+PN ++W +L+ AC + +EL E
Sbjct: 371 KIEHYGCMVDMFGRAGMVERAMEFIHTMPMKPNPIIWRTLVAACRAH---GRLELGESIT 427
Query: 426 ERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEF 485
L+ P ++ NYV++SN+YA +W + ++RR M +R I K PGCS++E++ VHEF
Sbjct: 428 RNLLNEYPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEF 487
Query: 486 MVGDGRHPCSEEIYSMLEYVAISLR 510
+ GD HP +EIY M+E +A L+
Sbjct: 488 IAGDESHPQWKEIYMMVEEMARELK 512
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/477 (35%), Positives = 277/477 (58%), Gaps = 12/477 (2%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
L +Q+HA+II T+L + +S I+Y +F I P TF F+++
Sbjct: 32 LKPLQQIHARIIITGLGRTRSLITKLLSF--AYAAASPISYTRRLFFSIPKPDTFLFHSL 89
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLV-VKSK 158
I ++ + Y +M+ + ++T+ ++K+ DL + +H V +
Sbjct: 90 ITLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGY 149
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
++ + + L++FY G V A+ +FD+M EK VV W +MI+G+ + +E ++LF
Sbjct: 150 GLDAYVQA--ALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELF 207
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
M+D GV+ + T VS+LSACA +GA LG WVHE++ +NC LN LG AL +MY++C
Sbjct: 208 FLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRC 267
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G + +A VF + EKN+ W ++I G +HG G +A+++F +M G +P++VT +AVL
Sbjct: 268 GNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVL 327
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM-PMEP 397
+AC+HAGL+++G++IF M+++Y + P+V+H C+VD+L RA L+EAY+ I+N P EP
Sbjct: 328 SACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEP 387
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
+W ++L AC N +L E L+ +EP N G+YV++SNIYA + D K
Sbjct: 388 APAVWTAMLGACKMHK---NFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEK 444
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+R +M + K G S I+++ V+ F +GD HP + +IY L+ + RE Y
Sbjct: 445 IRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSRCREAGY 501
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 278/522 (53%), Gaps = 87/522 (16%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LL+ CT +QVHA+II+ +Q L SL N S Y VFN + +PS
Sbjct: 31 LLKACTTTSTLEQVHARIIRKGLHQDHFLISQFLTLCNSLSNFS---YTTSVFNGVSSPS 87
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHS 152
T +NT I+GY+E + L+ +M + PD FTYP L+KAC + VK H
Sbjct: 88 TVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHG 147
Query: 153 LVVK--------------------------SKDFNSV----IHSLTRLITFYCNFGDVKS 182
V+ K F+ + + S T +I Y +F D+
Sbjct: 148 SAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVE 207
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM--------------------- 221
A+ LFD+M EKN V+W A+I+G+VK + R +F +M
Sbjct: 208 ARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDM 267
Query: 222 ------------RDS--------------GVEVNELTLVSVLSACANLGASELGKWVHEF 255
RD V+ +E +VS++SAC+ +G+ EL KWV ++
Sbjct: 268 ASARFVFEEAPERDVVAWSALIFRVCAEWNVKPDEFIMVSLMSACSQMGSLELAKWVDDY 327
Query: 256 VNKNCI-ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
V K+ I + + AAL DM AKCG ++ A ++F+ + ++++ ++ S++ GL+IHGCG +
Sbjct: 328 VRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQ 387
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
AV +F +M G+ PDDV +LTACS AGL+++G F +M+ DY + P+ HY C+V
Sbjct: 388 AVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMV 447
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
DLL RA L EAYE++++MP+EP+A WG+LL AC D +EL E+ ++L +LEP
Sbjct: 448 DLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCD---IELGEVVADQLFELEPQ 504
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
N GNYVL+SNIYAA QW D +R M+ER I K PGCS I
Sbjct: 505 NAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 546
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 270/475 (56%), Gaps = 11/475 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+++H + + F+ D L I + AH VF+++ ++ ++I GY
Sbjct: 71 RKIHGHLASSRFEGDAFLDNSL---IHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGY 127
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSV 163
A+ + I L M+ P+ FT+ LLKA G D +H+L VK D++
Sbjct: 128 AQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKC-DWHED 186
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
++ + L+ Y G + A +FD++ KN V+W A+I+G ++ + + +F +M+
Sbjct: 187 VYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQR 246
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
+G E T S+ S A +GA E GKWVH + K+ L +G + DMYAK G + +
Sbjct: 247 NGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMID 306
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A +VF+ VL K++ TWNS++ A +G G+EAV F +M+ SGI + +T + +LTACSH
Sbjct: 307 ARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSH 366
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
GL+++GK +++M ++Y +EP ++HY +VDLL RA LL+ A I MPMEP A +WG
Sbjct: 367 GGLVKEGKH-YFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWG 425
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL AC N ++ + A + + +L+P + G VL+ NIYA+ WD A ++R++MK
Sbjct: 426 ALLAACRMHK---NAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMK 482
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
+ K P CS +EI + VH F+ D HP +EEIY M + +++ +R+E Y M
Sbjct: 483 ATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDM 537
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 195/554 (35%), Positives = 286/554 (51%), Gaps = 90/554 (16%)
Query: 4 QLVPN------SQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKAS 57
QL P+ QL H +S + K + T ++ P + L Q KQ+HA IIK
Sbjct: 48 QLTPSLLPLTIQQLQHHPHS--TLKFNPTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTH 105
Query: 58 FDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQ 117
F + + QI F ++PS +N VI Y + +
Sbjct: 106 FHH-----------------ALQIPLND--FPSGLSPSA-QWNFVITSYTKRNQPRNALN 145
Query: 118 LYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKS----------------- 157
+Y Q+ + D+F P +LKACG + K +H V+K
Sbjct: 146 VYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYG 205
Query: 158 -----------------KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
+D S I + T L+ Y G + A+ LF+ +T+K VV+WTA
Sbjct: 206 ECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTA 265
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
MI G ++ EG LF +M++ + NE+T+++ E V +C
Sbjct: 266 MIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLN-----------------KERVEVDC 308
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
I L AL DMYAKCG I A R+F + +++C WN+II G A+HG GEEA+ +F
Sbjct: 309 I-----LNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFA 363
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M+ G+KP+D+T I +L ACSHAGL+ +GK++F M + + P ++HYGC+VDLL RA
Sbjct: 364 EMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 423
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
LLDEA+E+I++MP++PN ++WG+L+ AC N +L E+A +L+++EP N G V
Sbjct: 424 GLLDEAHEMIKSMPIKPNTIVWGALVAACRLHK---NPQLGELAATQLLEIEPENCGYNV 480
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYS 500
LMSNIYAA +W DA +R+ MK + K PG SVIE+N VHEF++GD HP I
Sbjct: 481 LMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINE 540
Query: 501 MLEYVAISLREECY 514
ML + L E Y
Sbjct: 541 MLAEMRRKLNEAGY 554
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 175/480 (36%), Positives = 276/480 (57%), Gaps = 13/480 (2%)
Query: 43 LVQFKQVHAQIIKASFDNR-TISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
L+ + +H IKASF T+++ L++ S + A VF + S ++ +
Sbjct: 267 LLLGRALHGYAIKASFGKELTLNNC----LLDMYSKSGNLNSAIQVFETMGERSVVSWTS 322
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSK 158
+I GYA GL ++L+ +M G+ PD FT +L AC G L K VH+ + ++K
Sbjct: 323 MIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENK 382
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
S + L+ Y G + A +F +M K++V+W MI G+ K E ++LF
Sbjct: 383 -MQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLF 441
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
+M+ + + N +T+ +L ACA+L A E G+ +H + +N L+ + AL DMY KC
Sbjct: 442 VEMQYNS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKC 500
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G + A +F ++ EK++ +W +I G +HG G EA+ F +M+ SGI+PD+V+ I++L
Sbjct: 501 GALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISIL 560
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
ACSH+GL+++G F MR + +EP +HY C+VDLL RA L +AY+ I+ MP+EP+
Sbjct: 561 YACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPD 620
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
A +WG+LL C D V+LAE E + +LEP N G YVL++NIYA +W++ K+
Sbjct: 621 ATIWGALLCGCRIYHD---VKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKL 677
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
R + R + KNPGCS IEI VH F+ GD HP + +I +L+ ++EE + +M
Sbjct: 678 RERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKM 737
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 192/369 (52%), Gaps = 42/369 (11%)
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK 139
++ A +F+++ + ++N++I GY GL +G+ L+ QM+ G++ D T ++
Sbjct: 200 RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVA 259
Query: 140 AC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVV 196
C G L + +H +K+ F + L+ Y G++ SA +F+ M E++VV
Sbjct: 260 GCSNTGMLLLGRALHGYAIKA-SFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVV 318
Query: 197 TWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV 256
+WT+MI G+ ++ + LF +M G+ + T+ ++L ACA G E GK VH ++
Sbjct: 319 SWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYI 378
Query: 257 NKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAV 316
+N + + + AL DMYAKCG + +A VF + K++ +WN++IGG + + EA+
Sbjct: 379 KENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEAL 438
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVD 375
+F +MQ + KP+ +T+ +L AC+ +E+G+EI + +R + ++ +V + LVD
Sbjct: 439 NLFVEMQYNS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVAN--ALVD 495
Query: 376 LLCR------ARLLDE----------------------------AYEVIRNMPMEPNAVL 401
+ + ARLL + A+ +RN +EP+ V
Sbjct: 496 MYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVS 555
Query: 402 WGSLLTACA 410
+ S+L AC+
Sbjct: 556 FISILYACS 564
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 156/280 (55%), Gaps = 15/280 (5%)
Query: 140 ACGDLRQVKGVHSLVVKSKDF--NSVIHSLTRLITFYCNFG-----------DVKSAQLL 186
CGDLR+ + + V K F N +++ ++ F + V+SA+ L
Sbjct: 148 TCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKL 207
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD++ +++V++W +MI+G+V +G+DLF +M G+ + T+VSV++ C+N G
Sbjct: 208 FDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGML 267
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
LG+ +H + K L L DMY+K G + A++VF+ + E++V +W S+I G
Sbjct: 268 LLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGY 327
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
A G + +V++F +M+ GI PD T+ +L AC+ GL+E GK++ +N ++ K++ +
Sbjct: 328 AREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDV-HNYIKENKMQSD 386
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+ L+D+ + + +A+ V M ++ + V W +++
Sbjct: 387 LFVSNALMDMYAKCGSMGDAHSVFSEMQVK-DIVSWNTMI 425
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 55/251 (21%)
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
N R ++L + +E+ T SVL CA+L + + G+ +H + N + ++ LG+
Sbjct: 83 NLRRAMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGS 140
Query: 270 ALTDMYAKCGYIEEALRVF------KIVL------------------------------- 292
L MY CG + E R+F K+ L
Sbjct: 141 KLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRR 200
Query: 293 ------------EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
+++V +WNS+I G +G E+ + +F QM + GI D T+++V+
Sbjct: 201 VESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAG 260
Query: 341 CSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
CS+ G++ G+ + Y ++ + E + + CL+D+ ++ L+ A +V M E +
Sbjct: 261 CSNTGMLLLGRALHGYAIKASFGKELTLNN--CLLDMYSKSGNLNSAIQVFETMG-ERSV 317
Query: 400 VLWGSLLTACA 410
V W S++ A
Sbjct: 318 VSWTSMIAGYA 328
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 179/488 (36%), Positives = 273/488 (55%), Gaps = 19/488 (3%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
LV + H Q F+ + L I+ Q+ A +F++I + ++ ++
Sbjct: 1158 LVSGRMSHQQAFVFGFETDLFVSSAL---IDMYSKCGQLKDARALFDEIPLRNVVSWTSM 1214
Query: 103 IRGYAEAGLGHRGIQLYTQMI--------GNGLDPDSFTYPILLKACGDLRQ---VKGVH 151
I GY + + L+ + GN + DS +L AC + +GVH
Sbjct: 1215 ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVH 1274
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
VVK K F+ I L+ Y G ++ +FD M EK+ ++W +MI + +
Sbjct: 1275 GFVVK-KGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLS 1333
Query: 212 REGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E +++F M R GV N +TL +VL ACA+ GA GK +H+ V K + N +G +
Sbjct: 1334 GEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 1393
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
+ DMY KCG +E A + F + EKNV +W +++ G +HG +EA+ +F++M +G+KP+
Sbjct: 1394 IIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN 1453
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+T ++VL ACSHAGL+E+G F M+ Y +EP ++HYGC+VDL RA L+EAY +I
Sbjct: 1454 YITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLI 1513
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+ M M+P+ V+WGSLL AC NV+L EIA ++L +L+P N G YVL+SN+YA
Sbjct: 1514 KRMKMKPDFVVWGSLLGACRIHK---NVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAG 1570
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+W D +MR LMK R +VK PG S++E+ VH F+VGD HP E IY LE + + L+
Sbjct: 1571 RWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQ 1630
Query: 511 EECYAARM 518
+ Y M
Sbjct: 1631 KIGYVPNM 1638
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 229/425 (53%), Gaps = 41/425 (9%)
Query: 5 LVPNSQLTH-FTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTI 63
+VP TH S N ++ L LLQ C + +Q+HA+II++ N
Sbjct: 1 MVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSN--- 57
Query: 64 SDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
D L KLI +IAYA L+F QI NP TF +N +IR GL + + LY M
Sbjct: 58 -DQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNM 116
Query: 123 IGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFY----- 174
+ G+ D FT+P ++KAC + + K VH ++K F+ + LI FY
Sbjct: 117 VCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK-YGFSGDVFVQNNLIDFYFKCGH 175
Query: 175 --------------------------CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
+ GD++ A+ +FD++ KNVV+WTAMING+++
Sbjct: 176 TRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRN 235
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ E ++LF++M+ + NE T+VS++ AC +G LG+ +H++ KNCI + LG
Sbjct: 236 QQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLG 295
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
AL DMY+KCG I++A+ VF+ + K++ TWNS+I L +HG G+EA+ +F +M+ +K
Sbjct: 296 TALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVK 355
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD +T I VL AC H +++G F M + Y + P +HY C+ +L R+ LDEA++
Sbjct: 356 PDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFK 415
Query: 389 VIRNM 393
+ +
Sbjct: 416 STKEV 420
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 162/323 (50%), Gaps = 15/323 (4%)
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLV 154
++N+VI A G ++ ++ + GL P ++P +K+C DL + H
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 1168
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG 214
F + + + LI Y G +K A+ LFD++ +NVV+WT+MI G+V+ +
Sbjct: 1169 FVF-GFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNA 1227
Query: 215 IDLFRKMRDSGVEVNE--------LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ LF+ + EV + + +VSVLSAC+ + + + VH FV K +
Sbjct: 1228 LLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIG 1287
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMS 325
+G L D YAKCG + +VF + EK+ +WNS+I A G EA+++F M +
Sbjct: 1288 VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHV 1347
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G++ + VTL AVL AC+HAG + GK I ++ +E NV ++D+ C+ ++
Sbjct: 1348 GVRYNAVTLSAVLLACAHAGALRAGKCI-HDQVIKMDLEYNVCVGTSIIDMYCKCGRVEM 1406
Query: 386 AYEVIRNMPMEPNAVLWGSLLTA 408
A + M E N W +++
Sbjct: 1407 AKKTFDRM-KEKNVKSWTAMVAG 1428
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 143/311 (45%), Gaps = 48/311 (15%)
Query: 136 ILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTR-LITFYCNFGDVKSAQLLFDQMTEKN 194
LL+ C + + ++ +H+ +++S N + LTR LI Y G + A LLF Q+
Sbjct: 32 FLLQNCKNFKHLRQIHAKIIRSGLSNDQL--LTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
TW +I + + + L++ M G+ ++ T V+ AC N + +LGK VH
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG-- 312
+ K + + L D Y KCG+ AL+VF+ + +NV +W ++I GL CG
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLI--SCGDL 207
Query: 313 -------------------------------EEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
EEA+++F +MQ I P++ T+++++ AC
Sbjct: 208 QEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKAC 267
Query: 342 SHAGLIEKGKEIFYNMRRDYK----VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
+ G++ G+ I DY +E V L+D+ + + +A EV MP +
Sbjct: 268 TEMGILTLGRGI-----HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK- 321
Query: 398 NAVLWGSLLTA 408
+ W S++T+
Sbjct: 322 SLPTWNSMITS 332
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
+K V + NV +WNS+I LA G EA++ F ++ G+ P + + +CS +
Sbjct: 1099 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 1158
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
G+ + + + E ++ L+D+ + L +A + +P+ N V W S++T
Sbjct: 1159 VSGR-MSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWTSMIT 1216
Query: 408 ACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
+ N L + + L + DGN V + ++
Sbjct: 1217 GYVQNEQADNALL--LFKDFLEEETEVEDGNNVPLDSV 1252
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 175/490 (35%), Positives = 274/490 (55%), Gaps = 16/490 (3%)
Query: 33 HLPLLQKCT---HLVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVF 88
+L +L C+ L K +H+ I S D + SD Q+ LI + A +F
Sbjct: 333 YLSILNACSTSKALEAGKLIHSHI---SEDGHS-SDVQIGNALISMYARCGDLPKARELF 388
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV- 147
+ ++N +I GYA ++LY QM G+ P T+ LL AC +
Sbjct: 389 YTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYA 448
Query: 148 --KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
K +H +++S S H L+ Y G + AQ +F+ ++V++W +MI GH
Sbjct: 449 DGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGH 507
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ +Y LF++M++ +E + +T SVLS C N A ELGK +H + ++ + L+
Sbjct: 508 AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDV 567
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
LG AL +MY +CG +++A VF + ++V +W ++IGG A G +A+++FWQMQ
Sbjct: 568 NLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNE 627
Query: 326 GIKPDD-VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
G +P D T ++L+AC+HAGL+ +G +IF +M +Y V P ++HYGCLV LL RAR
Sbjct: 628 GFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQ 687
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSN 444
EA +I MP P+A +W +LL AC N+ LAE A +KL N Y+L+SN
Sbjct: 688 EAETLINQMPFPPDAAVWETLLGACRIH---GNIALAEHAANNALKLNARNPAVYILLSN 744
Query: 445 IYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEY 504
+YAA +WDD K+RR+M+ R I K PG S IE+++++HEF+ D HP + EIY+ L+
Sbjct: 745 VYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKR 804
Query: 505 VAISLREECY 514
+++ + E Y
Sbjct: 805 LSVEMEEAGY 814
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 206/404 (50%), Gaps = 14/404 (3%)
Query: 18 ANSHKNSNTATKSHHHLPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKL-IE 73
+N+H+ T T ++ LLQ CT L + K++HAQ+++A D L+ L I
Sbjct: 15 SNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVG----PDIFLSNLLIN 70
Query: 74 SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFT 133
V + AH VF ++ ++N++I YA+ G + QL+ +M G P+ T
Sbjct: 71 MYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKIT 130
Query: 134 YPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
Y +L AC +L K +HS ++K+ + L++ Y GD+ A+ +F +
Sbjct: 131 YISILTACYSPAELENGKKIHSQIIKA-GYQRDPRVQNSLLSMYGKCGDLPRARQVFAGI 189
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
+ ++VV++ M+ + ++ +E + LF +M G+ +++T +++L A + GK
Sbjct: 190 SPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGK 249
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
+H+ + + + ++G AL M +CG ++ A + FK + +++V +N++I LA HG
Sbjct: 250 RIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHG 309
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
EA + +++M+ G+ + T +++L ACS + +E GK I ++ D +V+
Sbjct: 310 HNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH-SSDVQIG 368
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
L+ + R L +A E+ MP + + W +++ A +D
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKR-DLISWNAIIAGYARRED 411
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 199/385 (51%), Gaps = 13/385 (3%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
L + K++H ++ + SD ++ L+ V + A F I + +N
Sbjct: 245 LDEGKRIHKLTVEEGLN----SDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNA 300
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSK 158
+I A+ G + Y +M +G+ + TY +L AC L K +HS + +
Sbjct: 301 LIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED- 359
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
+S + LI+ Y GD+ A+ LF M ++++++W A+I G+ ++++ E + L+
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLY 419
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
++M+ GV+ +T + +LSACAN A GK +HE + ++ I N L AL +MY +C
Sbjct: 420 KQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRC 479
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G + EA VF+ ++V +WNS+I G A HG E A K+F +MQ ++PD++T +VL
Sbjct: 480 GSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVL 539
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
+ C + +E GK+I + + ++ +V L+++ R L +A V ++ +
Sbjct: 540 SGCKNPEALELGKQIHGRI-TESGLQLDVNLGNALINMYIRCGSLQDARNVFHSL-QHRD 597
Query: 399 AVLWGSLLTACASADDGANVELAEI 423
+ W +++ C AD G +++ E+
Sbjct: 598 VMSWTAMIGGC--ADQGEDMKAIEL 620
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 194/385 (50%), Gaps = 14/385 (3%)
Query: 33 HLPLLQKC---THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNS-SQIAYAHLVF 88
++ +L C L K++H+QIIKA + D ++ + S+ + A VF
Sbjct: 131 YISILTACYSPAELENGKKIHSQIIKAGYQR----DPRVQNSLLSMYGKCGDLPRARQVF 186
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LR 145
I ++NT++ YA+ + L+ QM G+ PD TY LL A L
Sbjct: 187 AGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLD 246
Query: 146 QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
+ K +H L V+ + NS I T L+T GDV SA+ F + +++VV + A+I
Sbjct: 247 EGKRIHKLTVE-EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAAL 305
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ + E + + +MR GV +N T +S+L+AC+ A E GK +H ++++ +
Sbjct: 306 AQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDV 365
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
++G AL MYA+CG + +A +F + ++++ +WN+II G A EA++++ QMQ
Sbjct: 366 QIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSE 425
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G+KP VT + +L+AC+++ GK I ++ R ++ N L+++ R L E
Sbjct: 426 GVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLME 484
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACA 410
A V + + W S++ A
Sbjct: 485 AQNVFEGTQAR-DVISWNSMIAGHA 508
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 155/298 (52%), Gaps = 8/298 (2%)
Query: 128 DPDSFTYPILLKACGDLR---QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQ 184
+ D TY LL+ C R + K +H+ +V++ + S LI Y V A
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLS-NLLINMYVKCRSVLDAH 82
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
+F +M ++V++W ++I+ + +Q ++ LF +M+++G N++T +S+L+AC +
Sbjct: 83 QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
E GK +H + K + ++ +L MY KCG + A +VF + ++V ++N+++G
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVE 364
A +E + +F QM GI PD VT I +L A + ++++GK I + + + +
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRI-HKLTVEEGLN 261
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
+++ LV + R +D A + + + + + V++ +L+ A A G NVE E
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGI-ADRDVVVYNALIAALAQ--HGHNVEAFE 316
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 179/498 (35%), Positives = 272/498 (54%), Gaps = 49/498 (9%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIIN 93
L+++C +L + K+ H QI+K+ + + +L+ S +YA VF+ I N
Sbjct: 24 LIEQCKNLRELKKTHTQILKSPTLHTGDQYYLITRLLYVCSFSYYGSFSYATNVFHMIKN 83
Query: 94 PSTFAFNTVIRGYAEAGLGH-----RGIQLYTQMIGNGLDPDSFTYPILLKACG---DLR 145
P A+N +IR Y G + + LY QM + P+ T+P LLK C D
Sbjct: 84 PDLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCKDIVPNCLTFPFLLKGCTQWLDGA 143
Query: 146 QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
+ +H+ V+K F ++ LI+ Y G + +A+ +FD+M +VVTW +M+ G
Sbjct: 144 TGQAIHTQVIKF-GFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTDVVTWNSMVIGC 202
Query: 206 VKQKNYREGIDLFRKMR----------------------------------DSGVEVNEL 231
++ +DLFRKM D V+ +++
Sbjct: 203 LRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSDDMVKPDKI 262
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
T+ SVLSACA LGA + GKWVH ++ +N I + +G AL +MY KCG +++A +F+ +
Sbjct: 263 TIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDVQKAFEIFEEM 322
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
EK+ W +I A+HG G +A F +M+ +G+KP+ VT + +L+AC+H+GL+E+G+
Sbjct: 323 PEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSACAHSGLVEQGR 382
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
F M+R Y +EP V HY C+VD+L RARL DE+ +IR+MPM+P+ +WG+LL C
Sbjct: 383 WCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDVYVWGALLGGCQM 442
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN- 470
NVEL E + LI LEP N YV +IYA +D A ++R +MKE+ I K
Sbjct: 443 H---GNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRNIMKEKRIEKKI 499
Query: 471 PGCSVIEINDVVHEFMVG 488
PGCS+IEIN V EF G
Sbjct: 500 PGCSMIEINGEVQEFSAG 517
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/516 (33%), Positives = 283/516 (54%), Gaps = 41/516 (7%)
Query: 32 HHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
H L L K HL KQ+ A + + +L + + S + YA L+F+ I
Sbjct: 8 HVLDTLSKSNHLNHLKQLQAYLTTLGHAHTHFYAFKLIRFCT--LTLSNLTYARLIFDHI 65
Query: 92 INPSTFAFNTVIRGYAEAGLGH-RGIQLYTQMI-GNGLDPDSFTYPILLKACGDLRQVKG 149
+ +T F +I YA H + L+ M+ P+ F +P LK C + +
Sbjct: 66 PSLNTHLFTAMITAYAAHPATHPSALSLFRHMLRSQPPRPNHFIFPHALKTCPESCAAES 125
Query: 150 VHSLVVKS---------------------------KDFNSV----IHSLTRLITFYCNFG 178
+H+ +VKS K F+ + + S T +++ + G
Sbjct: 126 LHAQIVKSGFHEYPVVQTALVDSYSKVSGGLGNAKKVFDEMSDRSVVSFTAMVSGFARVG 185
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
DV+SA +F +M +++V +W A+I G + + +GI+LFR+M N +T+V LS
Sbjct: 186 DVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECNRPNGVTVVCALS 245
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
AC ++G +LG+W+H +V KN + + + AL DMY KCG + +A +VF++ EK + +
Sbjct: 246 ACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARKVFEMNPEKGLTS 305
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQM--QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
WNS+I A+HG + A+ +F QM G++PD+VT + +L AC+H GL+EKG F
Sbjct: 306 WNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGGLVEKGYWYFEM 365
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
M ++Y +EP ++HYGCL+DLL RA DEA +V++ M MEP+ V+WGSLL C
Sbjct: 366 MVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNGCKVH---G 422
Query: 417 NVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
+LAE A ++LI+++P N G ++++N+Y +WD+ + R +K++ K PGCS I
Sbjct: 423 RTDLAEFAAKKLIEIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKSYKVPGCSWI 482
Query: 477 EINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
E++D VH+F D +P +E++Y +LE + + R E
Sbjct: 483 EVDDQVHQFYSLDKSNPKTEDLYIVLESL-VGFRNE 517
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 176/477 (36%), Positives = 280/477 (58%), Gaps = 17/477 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAY-AHLVFNQIINPSTFAFNTVIRG 105
KQVH +K+ D SD +A + ++ + AY A VFN + + ++N++I
Sbjct: 306 KQVHGIAVKSGLD----SDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISS 361
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL-----KACGDL---RQVKGVHSLVVKS 157
A++ L + L+ ++ GL PD FT + KACG L Q K +H+ +K+
Sbjct: 362 CAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKA 421
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
F+S +H + ++ Y GD+ +A ++F+ ++ + V WT+MI+G V N + + +
Sbjct: 422 G-FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRI 480
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
+ +MR S V +E T +++ A + + A E G+ +H V K + + +G +L DMYAK
Sbjct: 481 YHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAK 540
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG IE+A R+FK + +N+ WN+++ GLA HG EEAV +F M+ GI+PD V+ I +
Sbjct: 541 CGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGI 600
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
L+ACSHAGL + E ++M DY +EP ++HY CLVD L RA L+ EA +VI MP +
Sbjct: 601 LSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKA 660
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
+A + +LL AC D VE + RL LEPF+ YVL+SNIYAA +WDD
Sbjct: 661 SASINRALLGACRIQGD---VETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTD 717
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
R++MK +N+ K+PG S I++ +++H F+V D HP ++ IY +E + ++RE+ Y
Sbjct: 718 ARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGY 774
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 181/400 (45%), Gaps = 33/400 (8%)
Query: 26 TATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAH 85
TA +H+ LL KCTH ++ S + +S+ L+ ++ A
Sbjct: 86 TAISTHN--LLLGKCTHA-------RIVVSGSAGDHFLSNN----LLTMYSKCGSLSSAR 132
Query: 86 LVFNQIINPSTFAFNTVIRGYAEA-----GLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
VF+ +N ++ YA + G G+ L+ + + T +LK
Sbjct: 133 QVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKL 192
Query: 141 C---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVT 197
C G L +GVH +K V S L+ Y G ++ A+LLFD M E++VV
Sbjct: 193 CLNSGCLWAAEGVHGYAIKIGLEWDVFVS-GALVNIYSKCGRMRDARLLFDWMRERDVVL 251
Query: 198 WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS--ELGKWVHEF 255
W M+ G+V+ +E LF + SG+ +E ++ +L+ C G ELGK VH
Sbjct: 252 WNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGI 311
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
K+ + + + +L +MY+K G A VF + ++ +WNS+I A EE+
Sbjct: 312 AVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEES 371
Query: 316 VKMFWQMQMSGIKPDDVTLIAVL-----TACSHAGLIEKGKEIF-YNMRRDYKVEPNVKH 369
V +F + G+KPD TL ++ AC L+++GK+I + ++ + + +V
Sbjct: 372 VNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVN- 430
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
++D+ + + A ++ N P+ V W S+++ C
Sbjct: 431 -SGILDMYIKCGDMVNA-GIVFNYISAPDDVAWTSMISGC 468
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV-----KQKNYREGIDLFRKMRDS 224
L+T Y G + SA+ +FD E+++VTW A++ + N +EG+ LFR +R S
Sbjct: 118 LLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRAS 177
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
+TL VL C N G + VH + K + + + AL ++Y+KCG + +A
Sbjct: 178 LGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDA 237
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
+F + E++V WN ++ G G +EA ++F + SG++PD+ ++ +L C A
Sbjct: 238 RLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWA 297
Query: 345 GL--IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
G +E GK++ + + ++ +V LV++ + A EV +M + + W
Sbjct: 298 GTDDLELGKQV-HGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMK-HLDLISW 355
Query: 403 GSLLTACASA 412
S++++CA +
Sbjct: 356 NSMISSCAQS 365
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 289/534 (54%), Gaps = 71/534 (13%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINP 94
++++C+ + A +IK S + D +L + I + + + A Q+ P
Sbjct: 34 IIKQCSTPKLLESALAAMIKTSLNQ----DCRLMNQFITACTSFKCLDLAVSTMTQMQEP 89
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA-------------- 140
+ F +N + +G+ R ++LY +M+ + + P S+TY L+KA
Sbjct: 90 NVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAH 149
Query: 141 ----------------------CGDLRQVKGVHSLVVKSKDF------------------ 160
G +R+ + V + + D
Sbjct: 150 IWKFGFGFHVKIQTTLIDFYSATGGIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSA 209
Query: 161 NSVIHSLTR--------LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
NS+ + ++ LI Y G+++ A+ LF+QM K++++WT MI G+ + K YR
Sbjct: 210 NSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYR 269
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E I +F KM + G+ +E+T+ +V+SACA+LG E+GK VH + +N +L+ +G+AL
Sbjct: 270 EAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALV 329
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
DMY+KCG +E AL VF + +KN+ WNSII GLA HG +EA+KMF +M+M +KP+ V
Sbjct: 330 DMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAV 389
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
T ++V TAC+HAGL+++G+ I+ +M DY + NV+HYG +V L +A L+ EA E+I N
Sbjct: 390 TFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGN 449
Query: 393 MPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQW 452
M EPNAV+WG+LL C N+ +AEIA +L+ LEP N G Y L+ ++YA + +W
Sbjct: 450 MEFEPNAVIWGALLDGCRIHK---NLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRW 506
Query: 453 DDAGKMRRLMKERNIVK-NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
D ++R M+E I K PG S I I+ H F D H S+E+ +L+ +
Sbjct: 507 RDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 560
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 180/498 (36%), Positives = 280/498 (56%), Gaps = 23/498 (4%)
Query: 37 LQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
++ C+ L KQ H Q + F++ + L I+ +++ A ++F++I
Sbjct: 89 IKSCSALFDLNSGKQAHQQALVFGFESDLFVSSAL---IDMYSKCGKLSNARVLFDEIPR 145
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-----GNG----LDPDSFTYPILLKACGDL 144
+ + ++I GY + H + ++ + + GNG DS +L AC +
Sbjct: 146 RNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRV 205
Query: 145 RQ---VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
+GVH + +K + V+ L+ Y G+V ++ +FD M EK+VV+W +M
Sbjct: 206 SNKAVSEGVHGVAIKV-GLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSM 264
Query: 202 INGHVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
I + + + ++F M + G + NE+TL ++L ACA+ GA +G +H+ V K
Sbjct: 265 IAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMG 324
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ N + ++ DMY KCG E A F + EKNV +W ++I G +HG EA+ +F+
Sbjct: 325 YVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFY 384
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
QM +G+KP+ +T I+VL ACSHAG +E+G F M +Y VEP V+HYGC+VDLL RA
Sbjct: 385 QMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRA 444
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
+ EAY +I++M + + VLWGSLL AC D VELAEI+ L KL+P N G YV
Sbjct: 445 GYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKD---VELAEISARELFKLDPSNCGYYV 501
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYS 500
L++NIYA +W D +MR L+K+R +VK PG S++E+ VH F+VGD HP E+IY
Sbjct: 502 LLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYK 561
Query: 501 MLEYVAISLREECYAARM 518
LE +++ L+E Y M
Sbjct: 562 YLEELSVKLQEAGYVPNM 579
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 171/340 (50%), Gaps = 25/340 (7%)
Query: 87 VFNQIINPS-TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG--- 142
+FN+ + + +++N++I A G ++ ++ M + P+ T+P +K+C
Sbjct: 37 LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96
Query: 143 DLRQVKGVH--SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
DL K H +LV F S + + LI Y G + +A++LFD++ +N+VTWT+
Sbjct: 97 DLNSGKQAHQQALVF---GFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTS 153
Query: 201 MINGHVKQKNYREGIDLFRKM---------RDSGVEVNELTLVSVLSACANLGASELGKW 251
+I G+V+ + E + +F++ + G V+ + ++SVLSAC+ + + +
Sbjct: 154 LITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEG 213
Query: 252 VHEFVNKNCIILNDKLGA--ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
VH K + L+ +G L D YAKCG + + +VF + EK+V +WNS+I A +
Sbjct: 214 VHGVAIK--VGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQN 271
Query: 310 GCGEEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
G +A ++F M + G K ++VTL +L AC+H G + G + + + V NV
Sbjct: 272 GLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVN-NVI 330
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
++D+ C+ + A M E N W +++
Sbjct: 331 MATSIIDMYCKCGQAEMARNAFDGMK-EKNVRSWTAMIAG 369
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
+V +WNS+I LA G E+++ F M+ IKP+ T + +CS + GK+
Sbjct: 46 DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQA- 104
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
+ + E ++ L+D+ + L A + +P N V W SL+T DD
Sbjct: 105 HQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIP-RRNIVTWTSLITGYVQNDD 163
Query: 415 G 415
Sbjct: 164 A 164
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 263/461 (57%), Gaps = 10/461 (2%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q +QVH IK+ FD + + L + A+L+F + + ++N +I
Sbjct: 369 QGQQVHCLAIKSGFDVDICVNNAVLDLYG---KCKALMEAYLIFQGMKQKDSVSWNAIIA 425
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFN 161
+ G I + +M+ G+ PD FTY +LKAC LR ++ VH V+KS
Sbjct: 426 ALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSG-LG 484
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
S + ++ YC G + AQ L D++ + VV+W A+++G K E F +M
Sbjct: 485 SDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEM 544
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
D G++ + T +VL CANL ELGK +H + K ++ ++ + + L DMYAKCG +
Sbjct: 545 LDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDM 604
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
++L VF+ V +++ +WN++I G A+HG G EA++MF +MQ + P+ T +AVL AC
Sbjct: 605 PDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRAC 664
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SH GL + G F+ M YK+EP ++H+ C+VD+L R++ EA + I +MP + +AV+
Sbjct: 665 SHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVI 724
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
W +LL+ C D VE+AE+A ++ L+P + Y+L+SN+YA +W D + RRL
Sbjct: 725 WKTLLSICKIRQD---VEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRL 781
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
+K+ + K PGCS IE+ +H F+VGD HP S E+Y ML
Sbjct: 782 LKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEML 822
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 181/356 (50%), Gaps = 9/356 (2%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD DT ++ + ++ I+ A +F+ + +P ++N ++ GY + G+ +
Sbjct: 75 FDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESV 134
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITF 173
L+ +M G+ PD T+ +LLK+C L ++ VH+L VK+ + + + L+
Sbjct: 135 DLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG-LEIDVRTGSALVDM 193
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y + A F M E+N V+W A I G V+ + Y G++LF +M+ G+ V++ +
Sbjct: 194 YGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSY 253
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
S +CA + G+ +H KN + +G A+ D+YAK + +A R F +
Sbjct: 254 ASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPN 313
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
V T N+++ GL G G EA+ +F M S I+ D V+L V +AC+ +G+++
Sbjct: 314 HTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQV 373
Query: 354 F-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
++ + V+ V + ++DL + + L EAY + + M + ++V W +++ A
Sbjct: 374 HCLAIKSGFDVDICVNN--AVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAA 426
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 146/305 (47%), Gaps = 5/305 (1%)
Query: 92 INPSTFAFNTVIRGYAEAG--LGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG 149
+ P+ F+ V + A+AG G + +M+ +G P++F LL+
Sbjct: 11 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAAC 70
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+ ++V S ++T Y + GD+ +A LFD M + +VV+W A+++G+ ++
Sbjct: 71 ARRVFDAMPRRDTV--SWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRG 128
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
++E +DLF +M GV + T +L +C+ L LG VH K + ++ + G+
Sbjct: 129 MFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGS 188
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMY KC +++AL F + E+N +W + I G + +++F +MQ G+
Sbjct: 189 ALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGV 248
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+ + +C+ + G+++ + ++ K + +VD+ +A L +A
Sbjct: 249 SQPSYASAFRSCAAMSCLNTGRQLHAHAIKN-KFSSDRVVGTAIVDVYAKANSLTDARRA 307
Query: 390 IRNMP 394
+P
Sbjct: 308 FFGLP 312
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 207/482 (42%), Gaps = 65/482 (13%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASF--DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
LL+ C+ L + QVHA +K D RT S L++ + A F
Sbjct: 155 LLKSCSALEELSLGVQVHALAVKTGLEIDVRTGS-----ALVDMYGKCRSLDDALCFFYG 209
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQV 147
+ + ++ I G + RG++L+ +M GL +Y ++C L
Sbjct: 210 MPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTG 269
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ +H+ +K+K F+S T ++ Y + A+ F + V T AM+ G V+
Sbjct: 270 RQLHAHAIKNK-FSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
E + LF+ M S + + ++L V SACA G+ VH K+ ++ +
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 388
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
A+ D+Y KC + EA +F+ + +K+ +WN+II L +G ++ + F +M G+
Sbjct: 389 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 448
Query: 328 KPDDVTLIAVLTACS-----HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
KPDD T +VL AC+ GL+ K I + D V V VD+ C+ +
Sbjct: 449 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTV------VDMYCKCGI 502
Query: 383 LDEA----------------------------------YEVIRNMPMEPNAVLWGSLLTA 408
+DEA + + +M ++P+ + ++L
Sbjct: 503 IDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDT 562
Query: 409 CASADDGANVELAEIAMERLIKLEPFNDGNYV--LMSNIYAAKAQWDDAGKMRRLMKERN 466
CA+ A +EL + ++IK E +D Y+ + ++YA D+ + +++R+
Sbjct: 563 CANL---ATIELGKQIHGQIIKQEMLDD-EYISSTLVDMYAKCGDMPDSLLVFEKVEKRD 618
Query: 467 IV 468
V
Sbjct: 619 FV 620
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 263/461 (57%), Gaps = 10/461 (2%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q +QVH IK+ FD + + L + A+L+F + + ++N +I
Sbjct: 369 QGQQVHCLAIKSGFDVDICVNNAVLDLYG---KCKALMEAYLIFQGMKQKDSVSWNAIIA 425
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFN 161
+ G I + +M+ G+ PD FTY +LKAC LR ++ VH V+KS
Sbjct: 426 ALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSG-LG 484
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
S + ++ YC G + AQ L D++ + VV+W A+++G K E F +M
Sbjct: 485 SDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEM 544
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
D G++ + T +VL CANL ELGK +H + K ++ ++ + + L DMYAKCG +
Sbjct: 545 LDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDM 604
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
++L VF+ V +++ +WN++I G A+HG G EA++MF +MQ + P+ T +AVL AC
Sbjct: 605 PDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRAC 664
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SH GL + G F+ M YK+EP ++H+ C+VD+L R++ EA + I +MP + +AV+
Sbjct: 665 SHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVI 724
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
W +LL+ C D VE+AE+A ++ L+P + Y+L+SN+YA +W D + RRL
Sbjct: 725 WKTLLSICKIRQD---VEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRL 781
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
+K+ + K PGCS IE+ +H F+VGD HP S E+Y ML
Sbjct: 782 LKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEML 822
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 181/356 (50%), Gaps = 9/356 (2%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD DT ++ + ++ I+ A +F+ + +P ++N ++ GY + G+ +
Sbjct: 75 FDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESV 134
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITF 173
L+ +M G+ PD T+ +LLK+C L ++ VH+L VK+ + + + L+
Sbjct: 135 DLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG-LEIDVRTGSALVDM 193
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y + A F M E+N V+W A I G V+ + Y G++LF +M+ G+ V++ +
Sbjct: 194 YGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSY 253
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
S +CA + G+ +H KN + +G A+ D+YAK + +A R F +
Sbjct: 254 ASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPN 313
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
V T N+++ GL G G EA+ +F M S I+ D V+L V +AC+ +G+++
Sbjct: 314 HTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQV 373
Query: 354 F-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
++ + V+ V + ++DL + + L EAY + + M + ++V W +++ A
Sbjct: 374 HCLAIKSGFDVDICVNN--AVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAA 426
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 145/305 (47%), Gaps = 5/305 (1%)
Query: 92 INPSTFAFNTVIRGYAEAG--LGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG 149
+ P+ F+ V + A+AG G + +M+ +G P +F LL+
Sbjct: 11 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAAC 70
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+ ++V S ++T Y + GD+ +A LFD M + +VV+W A+++G+ ++
Sbjct: 71 ARRVFDAMPRRDTV--SWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRG 128
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
++E +DLF +M GV + T +L +C+ L LG VH K + ++ + G+
Sbjct: 129 MFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGS 188
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMY KC +++AL F + E+N +W + I G + +++F +MQ G+
Sbjct: 189 ALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGV 248
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+ + +C+ + G+++ + ++ K + +VD+ +A L +A
Sbjct: 249 SQPSYASAFRSCAAMSCLNTGRQLHAHAIKN-KFSSDRVVGTAIVDVYAKANSLTDARRA 307
Query: 390 IRNMP 394
+P
Sbjct: 308 FFGLP 312
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 207/482 (42%), Gaps = 65/482 (13%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASF--DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
LL+ C+ L + QVHA +K D RT S L++ + A F
Sbjct: 155 LLKSCSALEELSLGVQVHALAVKTGLEIDVRTGS-----ALVDMYGKCRSLDDALCFFYG 209
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQV 147
+ + ++ I G + RG++L+ +M GL +Y ++C L
Sbjct: 210 MPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTG 269
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ +H+ +K+K F+S T ++ Y + A+ F + V T AM+ G V+
Sbjct: 270 RQLHAHAIKNK-FSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
E + LF+ M S + + ++L V SACA G+ VH K+ ++ +
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 388
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
A+ D+Y KC + EA +F+ + +K+ +WN+II L +G ++ + F +M G+
Sbjct: 389 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 448
Query: 328 KPDDVTLIAVLTACS-----HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
KPDD T +VL AC+ GL+ K I + D V V VD+ C+ +
Sbjct: 449 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTV------VDMYCKCGI 502
Query: 383 LDEA----------------------------------YEVIRNMPMEPNAVLWGSLLTA 408
+DEA + + +M ++P+ + ++L
Sbjct: 503 IDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDT 562
Query: 409 CASADDGANVELAEIAMERLIKLEPFNDGNYV--LMSNIYAAKAQWDDAGKMRRLMKERN 466
CA+ A +EL + ++IK E +D Y+ + ++YA D+ + +++R+
Sbjct: 563 CANL---ATIELGKQIHGQIIKQEMLDD-EYISSTLVDMYAKCGDMPDSLLVFEKVEKRD 618
Query: 467 IV 468
V
Sbjct: 619 FV 620
>gi|15239985|ref|NP_199192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262420|sp|Q9FG85.1|PP415_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g43790
gi|10177948|dbj|BAB11307.1| unnamed protein product [Arabidopsis thaliana]
gi|332007627|gb|AED95010.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 460
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 175/467 (37%), Positives = 272/467 (58%), Gaps = 24/467 (5%)
Query: 24 SNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAY 83
S + +K+H L L+ KC L KQ+HAQII + T ++L L ++ ++Y
Sbjct: 3 SPSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC----LSY 58
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAE---AGLGHRGIQLYTQMIG---NGLDPDSFTYPIL 137
A + QI NPS F +NT+I + H LY Q++ N + P+ FTYP L
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 138 LKACG-DL---RQVKGVHSLVVKS-KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
KA G D R + +H+ V+K + N L+ FY N G ++ A+ LF+++ E
Sbjct: 119 FKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIRE 178
Query: 193 KNVVTWTAMINGHVKQKNY---REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
++ TW ++ + + E + LF +M+ V NEL+LV+++ +CANLG G
Sbjct: 179 PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRG 235
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
W H +V KN + LN +G +L D+Y+KCG + A +VF + +++V +N++I GLA+H
Sbjct: 236 VWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVH 295
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
G G+E ++++ + G+ PD T + ++ACSH+GL+++G +IF +M+ Y +EP V+H
Sbjct: 296 GFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEH 355
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
YGCLVDLL R+ L+EA E I+ MP++PNA LW S L S+ + E EIA++ L+
Sbjct: 356 YGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFL---GSSQTHGDFERGEIALKHLL 412
Query: 430 KLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
LE N GNYVL+SNIYA +W D K R LMK+ + K+PG S +
Sbjct: 413 GLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 189/553 (34%), Positives = 288/553 (52%), Gaps = 86/553 (15%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIE--SLVNSSQIAYAHLVFNQ 90
L LL C L FKQ+HA ++K + SD +A KL+ ++ S + YA +F
Sbjct: 9 LSLLNICKSLTTFKQIHANVLKLGLE----SDPFIAGKLLHHCAISLSDSLDYACRLFRY 64
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP-DSFTYPILLKACGDLRQVKG 149
NP F NT+IRG E+ + + +M N P DSF++ ++KA +LR V+
Sbjct: 65 TPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVR- 123
Query: 150 VHSLVVKSKDFNSVIHSL-------TRLITFY---------------------------- 174
V +++H L T LI+ Y
Sbjct: 124 ----VGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMV 179
Query: 175 ---CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN--------------------- 210
C GD+K + LFD M +N+++W M+ G+ K
Sbjct: 180 TACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWST 239
Query: 211 ----------YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
+ E FR+++ G+ NE +L VLSACA GA E GK +H F+ K+
Sbjct: 240 MIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSG 299
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ + AL D Y+KCG + A VF +I+ E+N+ +W S++ LA+HG GEEA+ +F
Sbjct: 300 LAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIF 359
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
+M+ SGI+PD++ I++L ACSHAGL+E+G E F M+ Y +EP+++HYGC+VDL R
Sbjct: 360 HKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGR 419
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
A L +AYE + MP+ A++W +LL AC+ D V+LAE ERL +L+P N ++
Sbjct: 420 AGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGD---VKLAEQVKERLSELDPNNSSDH 476
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
VL+SN YA +W DA +RR M E+ I K PG S+IE++ +++ F+ G ++ +EE Y
Sbjct: 477 VLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAY 536
Query: 500 SMLEYVAISLREE 512
L+ + LR E
Sbjct: 537 KKLKEIIRRLRVE 549
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 275/461 (59%), Gaps = 11/461 (2%)
Query: 49 VHAQIIK-ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS-TFAFNTVIRGY 106
+HA +IK A DN T + + S YA V + P F +N VIR
Sbjct: 15 LHATLIKNAQHDNPLSLRTFILRCANSSSPPDTARYAAAVLLRFPIPGDPFPYNAVIRHV 74
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHS 166
A + L++ M + D FT+P++LK+ +H+LV+K F+S I+
Sbjct: 75 ALHAPS-LALALFSHMHRTNVPFDHFTFPLILKSSK--LNPHCIHTLVLK-LGFHSNIYV 130
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM--RDS 224
LI Y G + ++ LFD+M +++++W+++I+ K+ E + LF++M ++S
Sbjct: 131 QNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLFQQMQLKES 190
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
+ + + ++SV+SA ++LGA ELG WVH F+++ + L LG+AL DMY++CG I+ +
Sbjct: 191 DILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMYSRCGDIDRS 250
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
++VF + +NV TW ++I GLA+HG G EA++ F+ M SG+KPD + + VL ACSH
Sbjct: 251 VKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFMGVLVACSHG 310
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
GL+E+G+ +F +M +Y +EP ++HYGC+VDLL RA ++ EA++ + M + PN+V+W +
Sbjct: 311 GLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRVRPNSVIWRT 370
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL AC + + + LAE A ER+ +L+P +DG+YVL+SN Y W +R M+E
Sbjct: 371 LLGACVNHN---LLVLAEKAKERIKELDPHHDGDYVLLSNAYGGVGNWVKKEGVRNSMRE 427
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
IVK PG S++ I+ V HEF+ GD HP EEI L V
Sbjct: 428 SKIVKEPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSV 468
>gi|147825156|emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 282/506 (55%), Gaps = 40/506 (7%)
Query: 35 PLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINP 94
P L+ C + +FKQ+ A I + ++L ++ + I +++ +F QI +P
Sbjct: 10 PSLKNCRSMSEFKQIQAFFITSGLSQHHPFASRLLSF-SAISSWGDIDHSYRIFLQIPSP 68
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVH 151
+ +N++IRG+++ + + ++ +M+ G+ PD TYP + KA L +++ VH
Sbjct: 69 TISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFVAKAVARLSELRLALAVH 128
Query: 152 SLVVKSKDF------NSVIH------------------------SLTRLITFYCNFGDVK 181
+ K + NS+IH S ++ Y GD+
Sbjct: 129 CRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGYAKCGDLD 188
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
SA +F M +++VV+W++MI+G VK Y + +F +MR G + N +T+VSVL ACA
Sbjct: 189 SAHQVFXSMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANXVTMVSVLCACA 248
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL--EKNVCTW 299
+LGA E G+ +H+++ N + L +L DMYAKCG IEEA+ VF+ V + +V W
Sbjct: 249 HLGALEXGRXMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVLMW 308
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N+IIGGLA HG E++++F +MQ+ GI PD++T + + +AC+H GL+ + F ++ +
Sbjct: 309 NTIIGGLATHGLVXESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSLGK 368
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
V P +HY C+VD+L RA L EAY+ I MPMEP A + G+LL C + +
Sbjct: 369 QGMV-PKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCM---NHRRFD 424
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
LAE +LI+LEP +DG Y+ +SN+YA WD+A MR M+ R + K+PG S +E+
Sbjct: 425 LAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSFVEVL 484
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLEYV 505
+H F+ D H E+IY ML +
Sbjct: 485 GTLHRFIAHDKTHNDLEKIYMMLNTI 510
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 263/461 (57%), Gaps = 10/461 (2%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q +QVH IK+ FD + + L + A+L+F + + ++N +I
Sbjct: 411 QGQQVHCLAIKSGFDVDICVNNAVLDLYG---KCKALMEAYLIFQGMKQKDSVSWNAIIA 467
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFN 161
+ G I + +M+ G+ PD FTY +LKAC LR ++ VH V+KS
Sbjct: 468 ALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSG-LG 526
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
S + ++ YC G + AQ L D++ + VV+W A+++G K E F +M
Sbjct: 527 SDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEM 586
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
D G++ + T +VL CANL ELGK +H + K ++ ++ + + L DMYAKCG +
Sbjct: 587 LDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDM 646
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
++L VF+ V +++ +WN++I G A+HG G EA++MF +MQ + P+ T +AVL AC
Sbjct: 647 PDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRAC 706
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SH GL + G F+ M YK+EP ++H+ C+VD+L R++ EA + I +MP + +AV+
Sbjct: 707 SHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVI 766
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
W +LL+ C D VE+AE+A ++ L+P + Y+L+SN+YA +W D + RRL
Sbjct: 767 WKTLLSICKIRQD---VEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRL 823
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
+K+ + K PGCS IE+ +H F+VGD HP S E+Y ML
Sbjct: 824 LKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEML 864
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 181/356 (50%), Gaps = 9/356 (2%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD DT ++ + ++ I+ A +F+ + +P ++N ++ GY + G+ +
Sbjct: 117 FDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESV 176
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITF 173
L+ +M G+ PD T+ +LLK+C L ++ VH+L VK+ + + + L+
Sbjct: 177 DLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG-LEIDVRTGSALVDM 235
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y + A F M E+N V+W A I G V+ + Y G++LF +M+ G+ V++ +
Sbjct: 236 YGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSY 295
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
S +CA + G+ +H KN + +G A+ D+YAK + +A R F +
Sbjct: 296 ASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPN 355
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
V T N+++ GL G G EA+ +F M S I+ D V+L V +AC+ +G+++
Sbjct: 356 HTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQV 415
Query: 354 F-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
++ + V+ V + ++DL + + L EAY + + M + ++V W +++ A
Sbjct: 416 HCLAIKSGFDVDICVNN--AVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAA 468
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 145/305 (47%), Gaps = 5/305 (1%)
Query: 92 INPSTFAFNTVIRGYAEAG--LGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG 149
+ P+ F+ V + A+AG G + +M+ +G P +F LL+
Sbjct: 53 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAAC 112
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+ ++V S ++T Y + GD+ +A LFD M + +VV+W A+++G+ ++
Sbjct: 113 ARRVFDAMPRRDTV--SWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRG 170
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
++E +DLF +M GV + T +L +C+ L LG VH K + ++ + G+
Sbjct: 171 MFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGS 230
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMY KC +++AL F + E+N +W + I G + +++F +MQ G+
Sbjct: 231 ALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGV 290
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+ + +C+ + G+++ + ++ K + +VD+ +A L +A
Sbjct: 291 SQPSYASAFRSCAAMSCLNTGRQLHAHAIKN-KFSSDRVVGTAIVDVYAKANSLTDARRA 349
Query: 390 IRNMP 394
+P
Sbjct: 350 FFGLP 354
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 207/482 (42%), Gaps = 65/482 (13%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASF--DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
LL+ C+ L + QVHA +K D RT S L++ + A F
Sbjct: 197 LLKSCSALEELSLGVQVHALAVKTGLEIDVRTGS-----ALVDMYGKCRSLDDALCFFYG 251
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQV 147
+ + ++ I G + RG++L+ +M GL +Y ++C L
Sbjct: 252 MPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTG 311
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ +H+ +K+K F+S T ++ Y + A+ F + V T AM+ G V+
Sbjct: 312 RQLHAHAIKNK-FSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 370
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
E + LF+ M S + + ++L V SACA G+ VH K+ ++ +
Sbjct: 371 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 430
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
A+ D+Y KC + EA +F+ + +K+ +WN+II L +G ++ + F +M G+
Sbjct: 431 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 490
Query: 328 KPDDVTLIAVLTACS-----HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
KPDD T +VL AC+ GL+ K I + D V V VD+ C+ +
Sbjct: 491 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTV------VDMYCKCGI 544
Query: 383 LDEA----------------------------------YEVIRNMPMEPNAVLWGSLLTA 408
+DEA + + +M ++P+ + ++L
Sbjct: 545 IDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDT 604
Query: 409 CASADDGANVELAEIAMERLIKLEPFNDGNYV--LMSNIYAAKAQWDDAGKMRRLMKERN 466
CA+ A +EL + ++IK E +D Y+ + ++YA D+ + +++R+
Sbjct: 605 CANL---ATIELGKQIHGQIIKQEMLDD-EYISSTLVDMYAKCGDMPDSLLVFEKVEKRD 660
Query: 467 IV 468
V
Sbjct: 661 FV 662
>gi|297791497|ref|XP_002863633.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309468|gb|EFH39892.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 460
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 174/467 (37%), Positives = 275/467 (58%), Gaps = 24/467 (5%)
Query: 24 SNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAY 83
S + +K+H L L+ KC L KQ+HAQII + T ++L L ++ ++Y
Sbjct: 3 SPSTSKNHRCLNLIPKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC----LSY 58
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAE---AGLGHRGIQLYTQMIG---NGLDPDSFTYPIL 137
A + QI NPS F +NT+I + H LY Q++ N + P+ FTYP L
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 138 LKACGDL----RQVKGVHSLVVKS-KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
KA G R + +H+ V+K + N L+ FY N G+++ A+ L +++ E
Sbjct: 119 FKASGFETKWHRHGRALHAHVLKFIEPVNHDRFVQAALVGFYANCGELREARSLLERIRE 178
Query: 193 KNVVTWTAMINGHV---KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
++ TW ++ + + ++ E + LF +M+ V NEL+LV+++ +CANLG G
Sbjct: 179 PDLATWNTLLAAYANSEETESDEEVLKLFVRMQ---VRPNELSLVALIKSCANLGEFWGG 235
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
W H ++ K + LN +G +L D Y+KCG + A +VF + E+++ +N++I GLA+H
Sbjct: 236 VWAHVYLLKKNLTLNQFVGTSLIDFYSKCGCLSFARQVFDEMSERDISCFNAMIRGLAVH 295
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
G G+E ++++ + G+ PD+ T + ++ACSH+GL+++G +IF++M+ Y +EP V+H
Sbjct: 296 GFGQEGIELYNSLISQGLVPDNATFVVTISACSHSGLVDEGLQIFHSMKTVYGIEPKVEH 355
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
YGCLVDLL R+ L+EA E I+ MPM+PNA LW S L SA ++E EIA+++L+
Sbjct: 356 YGCLVDLLGRSGRLEEAEECIKKMPMKPNATLWRSFL---GSAQIHGDLERGEIALKQLL 412
Query: 430 KLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
LE N GNYVL+SNIYA +W D K R LMK+ + K+PG S I
Sbjct: 413 GLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTI 459
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 179/488 (36%), Positives = 273/488 (55%), Gaps = 19/488 (3%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
LV + H Q F+ + L I+ Q+ A +F++I + ++ ++
Sbjct: 2031 LVSGRMSHQQAFVFGFETDLFVSSAL---IDMYSKCGQLKDARALFDEIPLRNVVSWTSM 2087
Query: 103 IRGYAEAGLGHRGIQLYTQMI--------GNGLDPDSFTYPILLKACGDLRQ---VKGVH 151
I GY + + L+ + GN + DS +L AC + +GVH
Sbjct: 2088 ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVH 2147
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
VVK K F+ I L+ Y G ++ +FD M EK+ ++W +MI + +
Sbjct: 2148 GFVVK-KGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLS 2206
Query: 212 REGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E +++F M R GV N +TL +VL ACA+ GA GK +H+ V K + N +G +
Sbjct: 2207 GEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 2266
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
+ DMY KCG +E A + F + EKNV +W +++ G +HG +EA+ +F++M +G+KP+
Sbjct: 2267 IIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN 2326
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+T ++VL ACSHAGL+E+G F M+ Y +EP ++HYGC+VDL RA L+EAY +I
Sbjct: 2327 YITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLI 2386
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+ M M+P+ V+WGSLL AC NV+L EIA ++L +L+P N G YVL+SN+YA
Sbjct: 2387 KRMKMKPDFVVWGSLLGACRIH---KNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAG 2443
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+W D +MR LMK R +VK PG S++E+ VH F+VGD HP E IY LE + + L+
Sbjct: 2444 RWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQ 2503
Query: 511 EECYAARM 518
+ Y M
Sbjct: 2504 KIGYVPNM 2511
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 228/424 (53%), Gaps = 39/424 (9%)
Query: 5 LVPNSQLTH-FTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTI 63
+VP TH S N ++ L LLQ C + +Q+HA+II++ N +
Sbjct: 1 MVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 60
Query: 64 SDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI 123
KLI +IAYA L+F QI NP TF +N +IR GL + + LY M+
Sbjct: 61 ---LTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMV 117
Query: 124 GNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFY------ 174
G+ D FT+P ++KAC + + K VH ++K F+ + LI FY
Sbjct: 118 CQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKY-GFSGDVFVQNNLIDFYFKCGHT 176
Query: 175 -------------------------CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+ GD++ A+ +FD++ KNVV+WTAMING+++ +
Sbjct: 177 RFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQ 236
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E ++LF++M+ + NE T+VS++ AC +G LG+ +H++ KNCI + LG
Sbjct: 237 QPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGT 296
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMY+KCG I++A+ VF+ + K++ TWNS+I L +HG G+EA+ +F +M+ +KP
Sbjct: 297 ALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKP 356
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D +T I VL AC H +++G F M + Y + P +HY C+ +L R+ LDEA++
Sbjct: 357 DAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKS 416
Query: 390 IRNM 393
+ +
Sbjct: 417 TKEV 420
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 162/323 (50%), Gaps = 15/323 (4%)
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLV 154
++N+VI A G ++ ++ + GL P ++P +K+C DL + H
Sbjct: 1982 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 2041
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG 214
F + + + LI Y G +K A+ LFD++ +NVV+WT+MI G+V+ +
Sbjct: 2042 FVF-GFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNA 2100
Query: 215 IDLFRKMRDSGVEVNE--------LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ LF+ + EV + + +VSVLSAC+ + + + VH FV K +
Sbjct: 2101 LLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIG 2160
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMS 325
+G L D YAKCG + +VF + EK+ +WNS+I A G EA+++F M +
Sbjct: 2161 VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHV 2220
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G++ + VTL AVL AC+HAG + GK I ++ +E NV ++D+ C+ ++
Sbjct: 2221 GVRYNAVTLSAVLLACAHAGALRAGKCI-HDQVIKMDLEYNVCVGTSIIDMYCKCGRVEM 2279
Query: 386 AYEVIRNMPMEPNAVLWGSLLTA 408
A + M E N W +++
Sbjct: 2280 AKKTFDRMK-EKNVKSWTAMVAG 2301
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 143/311 (45%), Gaps = 48/311 (15%)
Query: 136 ILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTR-LITFYCNFGDVKSAQLLFDQMTEKN 194
LL+ C + + ++ +H+ +++S N + LTR LI Y G + A LLF Q+
Sbjct: 32 FLLQNCKNFKHLRQIHAKIIRSGLSNDQL--LTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
TW +I + + + L++ M G+ ++ T V+ AC N + +LGK VH
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG-- 312
+ K + + L D Y KCG+ AL+VF+ + +NV +W ++I GL CG
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLI--SCGDL 207
Query: 313 -------------------------------EEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
EEA+++F +MQ I P++ T+++++ AC
Sbjct: 208 QEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKAC 267
Query: 342 SHAGLIEKGKEIFYNMRRDYK----VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
+ G++ G+ I DY +E V L+D+ + + +A EV MP +
Sbjct: 268 TEMGILTLGRGI-----HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK- 321
Query: 398 NAVLWGSLLTA 408
+ W S++T+
Sbjct: 322 SLPTWNSMITS 332
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A +K V + NV +WNS+I LA G EA++ F ++ G+ P + + +CS
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
+ G+ + + + E ++ L+D+ + L +A + +P+ N V W
Sbjct: 2028 LCDLVSGR-MSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWT 2085
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
S++T + N L + + L + DGN V + ++
Sbjct: 2086 SMITGYVQNEQADNALL--LFKDFLEEETEVEDGNNVPLDSV 2125
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 166/476 (34%), Positives = 277/476 (58%), Gaps = 12/476 (2%)
Query: 43 LVQFKQVHAQIIKASF-DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
L+ +Q+H I+K D ++ ++ L+ + + A VF ++ ++
Sbjct: 236 LLMGEQMHGLIVKDGLLDFVSVENS----LVTMYAKAGCMGAAFHVFESSRERNSITWSA 291
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK 158
+I GYA+ G + +++QM G P FT+ +L A DL + K H L+VK
Sbjct: 292 MITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVK-L 350
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
F I+ + L+ Y G + A+ FDQ+ E ++V WTAM++GHV+ + E + L+
Sbjct: 351 GFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLY 410
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
+M G+ ++ T+ S L ACA + A E GK +H + K + L +G+AL+ MY+KC
Sbjct: 411 ARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKC 470
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G +E+ + VF+ + +++V WNSII G + +GCG A+ +F +M+M G PD++T I +L
Sbjct: 471 GNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINIL 530
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
ACSH GL+++G E F M +DY + P + HY C+VD+L RA +L EA + I ++ ++
Sbjct: 531 CACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHG 590
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
LW +L AC S D ++ A ERL++L + Y+L+SNIYA++ +W+D ++
Sbjct: 591 TCLWRIVLGACRSLRD---FDVGAYAGERLMELGTGDSSAYILLSNIYASQRKWNDVERV 647
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
R LM+ R + K+PGCS +E+N VH F+VG+ +HP +E I + L +A +++E Y
Sbjct: 648 RHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMKDEGY 703
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 173/357 (48%), Gaps = 13/357 (3%)
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS-FTYPILLK 139
++ A VF+ + ++F+++T++ GYA L+ M+ S F +L
Sbjct: 169 VSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLS 228
Query: 140 ACG---DLRQVKGVHSLVVKSK--DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
A L + +H L+VK DF SV +S L+T Y G + +A +F+ E+N
Sbjct: 229 AVSVPLGLLMGEQMHGLIVKDGLLDFVSVENS---LVTMYAKAGCMGAAFHVFESSRERN 285
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
+TW+AMI G+ + + +F +M +G E T V VL+A ++LGA +GK H
Sbjct: 286 SITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHG 345
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+ K + + +AL DMYAKCG I +A F + E ++ W +++ G +G EE
Sbjct: 346 LMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEE 405
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+ ++ +M GI P T+ + L AC+ +E GK++ + + Y + L
Sbjct: 406 ALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVK-YGLGLGAPVGSALS 464
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA--SADDGANVELAEIAMERLI 429
+ + L++ V R +P + + + W S+++ + +GA E+ ME I
Sbjct: 465 TMYSKCGNLEDGMSVFRRIP-DRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTI 520
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 133/260 (51%), Gaps = 5/260 (1%)
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H+L K S ++ T L+ YC G V A+ +FD M ++N +W+ M+ G+ +K
Sbjct: 140 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 199
Query: 211 YREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E DLFR M + E +E +VLSA + +G+ +H + K+ ++ +
Sbjct: 200 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 259
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
+L MYAK G + A VF+ E+N TW+++I G A +G + AV MF QM +G P
Sbjct: 260 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTP 319
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
+ T + VL A S G + GK+ M + ++V+ VK LVD+ + + +A E
Sbjct: 320 TEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVK--SALVDMYAKCGCIADAKE 377
Query: 389 VIRNMPMEPNAVLWGSLLTA 408
+ E + VLW ++++
Sbjct: 378 GFDQL-YEVDIVLWTAMVSG 396
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 176/488 (36%), Positives = 272/488 (55%), Gaps = 13/488 (2%)
Query: 33 HLPLLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
++ +L C L KQ+HA I+++ + + T L K+ + A VF
Sbjct: 233 YMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKM---YMKCGAFKDAREVFE 289
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQ 146
+ A+NT+IRG+ ++G + +M+ G+ PD TY +L AC G L +
Sbjct: 290 CLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLAR 349
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
K +H+ K S + LI Y G +K A+ +FD+M +++VV+WT ++ +
Sbjct: 350 GKEIHARAAKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYA 408
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
E F++M GV+ N++T + VL AC+N A + GK +H V K ++ +
Sbjct: 409 DCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLA 468
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+ AL MY KCG +E+A+RVF+ + ++V TWN++IGGL +G G EA++ + M+ G
Sbjct: 469 VTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEG 528
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
++P+ T + VL+AC L+E+G+ F M +DY + P KHY C+VD+L RA L EA
Sbjct: 529 MRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREA 588
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
+VI +P++P+A +WG+LL AC NVE+ E A E +KLEP N G YV +S IY
Sbjct: 589 EDVILTIPLKPSAAMWGALLAACRIH---CNVEIGERAAEHCLKLEPQNAGLYVSLSAIY 645
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
AA W D K+R+ MKER + K PG S IEI VH F+ D HP ++EIY+ LE +
Sbjct: 646 AAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLK 705
Query: 507 ISLREECY 514
++ Y
Sbjct: 706 KQMKSLGY 713
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 195/391 (49%), Gaps = 14/391 (3%)
Query: 30 SHHHLPLLQKCTH---LVQFKQVHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIAYAH 85
S+ ++ LLQ C L KQVH I++ N I++T L++ + + A
Sbjct: 28 SYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNT----LLKLYAHCGSVNEAR 83
Query: 86 LVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD-- 143
+F++ N S ++N +I GYA GL L+T M L+PD FT+ +L AC
Sbjct: 84 QLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPA 143
Query: 144 -LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
L + +H V+++ N LI+ Y G V+ A+ +FD M ++ V+WT +
Sbjct: 144 VLNWGREIHVRVMEAGLANDTTVG-NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLT 202
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
+ + E + + M V + +T ++VLSAC +L A E GK +H + ++
Sbjct: 203 GAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYH 262
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
+ ++ ALT MY KCG ++A VF+ + ++V WN++I G G EEA F +M
Sbjct: 263 SDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRM 322
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
G+ PD T VL+AC+ G + +GKEI +D V +V+ L+++ +A
Sbjct: 323 LEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVS-DVRFGNALINMYSKAGS 381
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
+ +A +V MP + + V W +LL A D
Sbjct: 382 MKDARQVFDRMP-KRDVVSWTTLLGRYADCD 411
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 155/309 (50%), Gaps = 9/309 (2%)
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
G DS+ Y LL++C DL K VH +++ ++ L+ Y + G V
Sbjct: 22 KGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRC-GVKPNVYITNTLLKLYAHCGSVN 80
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
A+ LFD+ + K+VV+W MI+G+ + +E +LF M+ +E ++ T VS+LSAC+
Sbjct: 81 EARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACS 140
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
+ G+ +H V + + + +G AL MYAKCG + +A RVF + ++ +W +
Sbjct: 141 SPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTT 200
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+ G A G GEE++K + M ++P +T + VL+AC +EKGK+I ++ +
Sbjct: 201 LTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHI-VES 259
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
+ +V+ L + + +A EV + + + W +++ D +E A
Sbjct: 260 EYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYR-DVIAWNTMIRGFV---DSGQLEEA 315
Query: 422 EIAMERLIK 430
R+++
Sbjct: 316 HGTFHRMLE 324
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%)
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
D+ + + G +V+ V +L +C +GK VHE + + + N + L +Y
Sbjct: 14 DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
A CG + EA ++F K+V +WN +I G A G +EA +F MQ ++PD T +
Sbjct: 74 AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133
Query: 336 AVLTACSHAGLIEKGKEI 353
++L+ACS ++ G+EI
Sbjct: 134 SILSACSSPAVLNWGREI 151
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 172/452 (38%), Positives = 258/452 (57%), Gaps = 37/452 (8%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-- 141
A VF++ + + T+I GYA ++++ M+ + ++P+ T ++ AC
Sbjct: 311 ARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSD 370
Query: 142 -GDLRQVKGVHS--------------------------LVVKSKDFNSV----IHSLTRL 170
G+L K VH LV + F+ + ++S T +
Sbjct: 371 MGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSM 430
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNE 230
+ Y GD++SA+ FDQ KN V W+AMI G+ + +E + LF +M + GV E
Sbjct: 431 VNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIE 490
Query: 231 LTLVSVLSACANLGASELGKWVHE-FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
TLVSVLSAC L LG W+H+ FV I L+ L A+ DMYAKCG I+ A VF
Sbjct: 491 HTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFS 550
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ E+N+ +WN++I G A +G ++A+ +F QM+ G +P+++T +++LTACSH GLI +
Sbjct: 551 TMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISE 610
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
G+E F NM R Y ++P HY C+VDLL R LL+EAY++I NMPM+P WG+LL AC
Sbjct: 611 GREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNAC 670
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
NVELA ++ L++L+P + G YVL++N A +W D ++R LMK++ + K
Sbjct: 671 RMH---GNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKK 727
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSM 501
PG S+IEI+ EF+V D HP SEEIY +
Sbjct: 728 IPGYSLIEIDGGFVEFLVADESHPQSEEIYKL 759
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 213/435 (48%), Gaps = 36/435 (8%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L +++ C+ + Q KQ+ A++ +++ +L +S + YAH +FN++
Sbjct: 161 LLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFC-ALAHSGDLHYAHTIFNRVEQ 219
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSL 153
P+TF +NT+IRGY A + M ++ DS ++ LKAC V S+
Sbjct: 220 PNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESV 279
Query: 154 --VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
VV F+ + LI FY G +K+A+ +FD+ ++K+VVTWT MI+G+
Sbjct: 280 YCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCS 339
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE----------------- 254
E +++F M S VE NE+TL++V+SAC+++G E+GK VHE
Sbjct: 340 EEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNAL 399
Query: 255 ---FVNKNCII----LNDKLG-------AALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
+V +C++ L D++ ++ + YAKCG +E A R F KN W+
Sbjct: 400 LDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWS 459
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
++I G + + +E++K+F +M G+ P + TL++VL+AC + G I
Sbjct: 460 AMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVG 519
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
+ +V +VD+ + +D A EV MP E N + W +++ A A+ A +
Sbjct: 520 KIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMP-ERNLISWNTMIAGYA-ANGRAKQAI 577
Query: 421 AEIAMERLIKLEPFN 435
R + EP N
Sbjct: 578 NVFDQMRNMGFEPNN 592
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 125/283 (44%), Gaps = 14/283 (4%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQII 92
L + KC LV +++ FD D ++ + A F+Q
Sbjct: 400 LDMYVKCDCLVDAREL--------FDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTP 451
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---G 149
+ ++ +I GY++ ++L+ +M+ G+ P T +L ACG L +
Sbjct: 452 RKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDW 511
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H V K + ++ Y G + +A +F M E+N+++W MI G+
Sbjct: 512 IHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANG 571
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG-ASELGKWVHEFVNKNCIILNDKLG 268
++ I++F +MR+ G E N +T VS+L+AC++ G SE ++ K I
Sbjct: 572 RAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHY 631
Query: 269 AALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGGLAIHG 310
A + D+ + G +EEA ++ + ++ W +++ +HG
Sbjct: 632 ACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHG 674
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 291/507 (57%), Gaps = 34/507 (6%)
Query: 8 NSQLTHFTNSANS-HKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDT 66
N +F S NS H+N ++ + P++ + L ++ + + Q+ +A+
Sbjct: 28 NPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLWTSSLARYCR-NGQLSEAA--------A 78
Query: 67 QLAKLIESLVNSSQIAYAHLVFNQIINPS-TFAFNTVIRGYA-EAGLGHRGIQLYTQMIG 124
+ ++ + V + I + L+ PS +F F + + GYA + GL + + T +I
Sbjct: 79 EFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALID 138
Query: 125 NGLDPDSFTYPILLKACGDLRQVKGV-HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSA 183
+ C L + V ++L VK NSV S ++ + G+++ A
Sbjct: 139 ------------MYSKCAQLGHARKVFYNLGVK----NSV--SWNTMLNGFMRNGEIELA 180
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
LFD+M ++ ++WTA+ING +K + ++ F +M+ SGV + +++++VL+ACA+L
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
GA LG WVH FV N K+ +L DMY++CG IE A +VF + ++ + +WNSII
Sbjct: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
G A++G +E+++ F+ MQ G KPD V+ LTACSHAGL+ KG E+F NM+ +K+
Sbjct: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
P ++HYGC+VDL RA L++A +I MPM+PN V+ GSLL AC + D V LAE
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGD---VNLAER 417
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVH 483
M+ L KL+P D YVL+SNIYAA +WD A +RR MK R + K PG S +EI+ VH
Sbjct: 418 LMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVH 477
Query: 484 EFMVGDGRHPCSEEIYSMLEYVAISLR 510
EF+ GD H ++ IYSML+ + L+
Sbjct: 478 EFVAGDNYHADADNIYSMLDLLCHELK 504
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 171/493 (34%), Positives = 283/493 (57%), Gaps = 17/493 (3%)
Query: 26 TATKSHHHLPLLQKCTHLVQFKQVHAQIIKASF-DNRTISDTQLAKLIESLVNSSQIAYA 84
TA S +PL L+ +Q+H I+K D ++ ++ L+ + + A
Sbjct: 118 TAVLSAVSVPL-----GLLMGEQMHGLIVKDGLLDFVSVENS----LVTMYAKAGCMGAA 168
Query: 85 HLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL 144
VF ++ ++ +I GYA+ G + +++QM G P FT+ +L A DL
Sbjct: 169 FHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDL 228
Query: 145 RQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
+ K H L+VK F I+ + L+ Y G + A+ FDQ+ E ++V WTAM
Sbjct: 229 GALAVGKQAHGLMVK-LGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAM 287
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
++GHV+ + E + L+ +M G+ ++ T+ S L ACA + A E GK +H + K +
Sbjct: 288 VSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGL 347
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
L +G+AL+ MY+KCG +E+ + VF+ + +++V WNSII G + +GCG A+ +F +
Sbjct: 348 GLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEE 407
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
M+M G PD++T I +L ACSH GL+++G E F M +DY + P + HY C+VD+L RA
Sbjct: 408 MKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAG 467
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVL 441
+L EA + I ++ ++ LW +L AC S D ++ A ERL++L + Y+L
Sbjct: 468 MLKEAKDFIESITIDHGTCLWRIVLGACRSLRD---FDVGAYAGERLMELGTGDSSAYIL 524
Query: 442 MSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSM 501
+SNIYA++ +W+D ++R LM+ R + K+PGCS +E+N VH F+VG+ +HP +E I +
Sbjct: 525 LSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQ 584
Query: 502 LEYVAISLREECY 514
L +A +++E Y
Sbjct: 585 LRRLAKHMKDEGY 597
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 173/357 (48%), Gaps = 13/357 (3%)
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS-FTYPILLK 139
++ A VF+ + ++F+++T++ GYA L+ M+ S F +L
Sbjct: 63 VSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLS 122
Query: 140 ACG---DLRQVKGVHSLVVKSK--DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
A L + +H L+VK DF SV +S L+T Y G + +A +F+ E+N
Sbjct: 123 AVSVPLGLLMGEQMHGLIVKDGLLDFVSVENS---LVTMYAKAGCMGAAFHVFESSRERN 179
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
+TW+AMI G+ + + +F +M +G E T V VL+A ++LGA +GK H
Sbjct: 180 SITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHG 239
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+ K + + +AL DMYAKCG I +A F + E ++ W +++ G +G EE
Sbjct: 240 LMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEE 299
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+ ++ +M GI P T+ + L AC+ +E GK++ + + Y + L
Sbjct: 300 ALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVK-YGLGLGAPVGSALS 358
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA--SADDGANVELAEIAMERLI 429
+ + L++ V R +P + + + W S+++ + +GA E+ ME I
Sbjct: 359 TMYSKCGNLEDGMSVFRRIP-DRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTI 414
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 133/260 (51%), Gaps = 5/260 (1%)
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H+L K S ++ T L+ YC G V A+ +FD M ++N +W+ M+ G+ +K
Sbjct: 34 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 93
Query: 211 YREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E DLFR M + E +E +VLSA + +G+ +H + K+ ++ +
Sbjct: 94 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 153
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
+L MYAK G + A VF+ E+N TW+++I G A +G + AV MF QM +G P
Sbjct: 154 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTP 213
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
+ T + VL A S G + GK+ M + ++V+ VK LVD+ + + +A E
Sbjct: 214 TEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVK--SALVDMYAKCGCIADAKE 271
Query: 389 VIRNMPMEPNAVLWGSLLTA 408
+ E + VLW ++++
Sbjct: 272 GFDQL-YEVDIVLWTAMVSG 290
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 166/476 (34%), Positives = 277/476 (58%), Gaps = 12/476 (2%)
Query: 43 LVQFKQVHAQIIKASF-DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
L+ +Q+H I+K D ++ ++ L+ + + A VF ++ ++
Sbjct: 236 LLMGEQMHGLIVKDGLLDFVSVENS----LVTMYAKAGCMGAAFHVFESSRERNSITWSA 291
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK 158
+I GYA+ G + +++QM G P FT+ +L A DL + K H L+VK
Sbjct: 292 MITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVK-L 350
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
F I+ + L+ Y G + A+ FDQ+ E ++V WTAM++GHV+ + E + L+
Sbjct: 351 GFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLY 410
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
+M G+ ++ T+ S L ACA + A E GK +H + K + L +G+AL+ MY+KC
Sbjct: 411 ARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKC 470
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G +E+ + VF+ + +++V WNSII G + +GCG A+ +F +M+M G PD++T I +L
Sbjct: 471 GNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINIL 530
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
ACSH GL+++G E F M +DY + P + HY C+VD+L RA +L EA + I ++ ++
Sbjct: 531 CACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHG 590
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
LW +L AC S D ++ A ERL++L + Y+L+SNIYA++ +W+D ++
Sbjct: 591 TCLWRIVLGACRSLRD---FDVGAYAGERLMELGTRDSSAYILLSNIYASQRKWNDVERV 647
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
R LM+ R + K+PGCS +E+N VH F+VG+ +HP +E I + L +A +++E Y
Sbjct: 648 RHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMKDEGY 703
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 133/260 (51%), Gaps = 5/260 (1%)
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H+L K S ++ T L+ YC G V A+ +FD M ++N +W+ M+ G+ +K
Sbjct: 140 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKC 199
Query: 211 YREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E DLFR M + E +E +VLSA + +G+ +H + K+ ++ +
Sbjct: 200 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 259
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
+L MYAK G + A VF+ E+N TW+++I G A +G + AV MF QM +G P
Sbjct: 260 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTP 319
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
+ T + VL A S G + GK+ M + ++V+ VK LVD+ + + +A E
Sbjct: 320 TEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVK--SALVDMYAKCGCIADAKE 377
Query: 389 VIRNMPMEPNAVLWGSLLTA 408
+ E + VLW ++++
Sbjct: 378 GFDQL-YEVDIVLWTAMVSG 396
>gi|297793453|ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
gi|297310446|gb|EFH40870.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 180/509 (35%), Positives = 284/509 (55%), Gaps = 51/509 (10%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+ LL+ C + Q +HA+II+ D +L ++ +L I YA+ VF + N
Sbjct: 33 ISLLRNCKNNAQVPSIHAKIIRTFHDQDAFVVFELIRVCSTL---DSIDYAYDVFRYVSN 89
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSL 153
P+ + + +I G+ +G G+ LY +MI + + PD++ +LKACG L + + +HS
Sbjct: 90 PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHSSVLPDNYVITSVLKACG-LDECREIHSQ 148
Query: 154 VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE--------------------- 192
V+K F S +L+ Y G++ A+ +FD+M +
Sbjct: 149 VLK-LGFGSSRSVGLKLMEIYGKSGELADAKKVFDEMPDRDQVVATVMINCYSECGCIKE 207
Query: 193 ----------KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
K+ V WTAMI+G V+ + + ++LFR+M+ +SV A
Sbjct: 208 ALELFQDVKIKDTVCWTAMIDGLVRNREMNKALELFREMQ-----------LSVFYLPAR 256
Query: 243 LGAS-ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
+ G VH FV + L++ +G AL +MY++CG I A RVFK + +K+V ++N+
Sbjct: 257 IWVRWSSGAGVHSFVENQKMELSNFVGNALINMYSRCGDINVAKRVFKGMRDKDVISYNT 316
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+I GLA+HG EA+ +F M G +P+ VTL+A+L ACSH GL++ G E+F +M R +
Sbjct: 317 MISGLAMHGASVEAINVFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMWRVF 376
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
VEP ++HYGC+VDLL R L+EAY I NM +EP+ ++ G+LL+AC N+EL
Sbjct: 377 SVEPQIEHYGCIVDLLGRVGRLEEAYRFIENMLIEPDHIMLGALLSACKIH---GNMELG 433
Query: 422 EIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
E +RL + E + G YVL+S+IYA+ +W ++ ++R M+E I K PGCS IE+++
Sbjct: 434 EKIAKRLFESENPDSGTYVLLSHIYASSGKWKESTEIRESMRESGIEKEPGCSTIEVDNQ 493
Query: 482 VHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+HEF VGD HP E IY L+ + +LR
Sbjct: 494 IHEFHVGDIAHPRKEAIYQRLQELNRNLR 522
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 162/446 (36%), Positives = 257/446 (57%), Gaps = 9/446 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I + ++ A +F + F + ++ GY + G+ +++ M + +
Sbjct: 241 MISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP----EKN 296
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
S ++ ++ +++ L N + S +IT Y GD+ A+ FD+M
Sbjct: 297 SVSWNAIIAGYVQCKRMDQARELFEAMPCQN--VSSWNTMITGYAQNGDIAQARNFFDRM 354
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
+++ ++W A+I G+ + E + LF +M+ G +N T S LS CA + A ELGK
Sbjct: 355 PQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGK 414
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
VH V K + +G AL MY KCG I++A VF+ + EK V +WN++I G A HG
Sbjct: 415 QVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHG 474
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
G+EA+ +F M+ +GI PDDVT++ VL+ACSH GL++KG E FY+M +DY + N KHY
Sbjct: 475 FGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHY 534
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
C++DLL RA LD+A +++NMP EP+A WG+LL A + N EL E A + + +
Sbjct: 535 TCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGA---SRIHGNTELGEKAAKMIFE 591
Query: 431 LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
+EP N G YVL+SN+YAA +W D G+MR M++R + K PG S +E+ + +H F VGD
Sbjct: 592 MEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDS 651
Query: 491 RHPCSEEIYSMLEYVAISLREECYAA 516
HP + IY+ LE + + +++E Y +
Sbjct: 652 VHPERDRIYTFLEELDLKMKKEGYVS 677
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 166/376 (44%), Gaps = 46/376 (12%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
+F+Q+H++ S T ++ + + + SS A +V +N I
Sbjct: 8 RFRQLHSRSCLRSLQTTTTANRKPSTRNQPKTTSSLATDADIV----------KWNIAIT 57
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVI 164
+ G ++L+ M S ++ ++ C + L K + V
Sbjct: 58 NHMRNGQCDSALRLFNSMPRR----SSISWNAMISGCLSNDKFYLARQLFEKMPTRDLV- 112
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
S +I+ + ++++A+LLFDQM E++VV+W AM++G+ + +E ++F +M
Sbjct: 113 -SWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK 171
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVH------EFVNKNCIILNDKLGAALTDMYAKC 278
N ++ +L+A G E + + E ++ NC++ Y K
Sbjct: 172 ----NSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGG----------YVKR 217
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
+ +A +F + E++ +WN++I G A +G EA ++F + S ++ D T A++
Sbjct: 218 NRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF---EESPVR-DVFTWTAMV 273
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
+ G++++ + +F M E N + ++ + + +D+A E+ MP + N
Sbjct: 274 SGYVQNGMLDEARRVFDGM-----PEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-N 327
Query: 399 AVLWGSLLTACASADD 414
W +++T A D
Sbjct: 328 VSSWNTMITGYAQNGD 343
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 7/160 (4%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQVH +++KA ++ L + I A++VF I ++NT+I GY
Sbjct: 414 KQVHGRVVKAGLESGCYVGNALLVM---YCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGY 470
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-KGVHSLVVKSKDFNSVIH 165
A G G + L+ M G+ PD T +L AC V KG ++D+ +
Sbjct: 471 ARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITAN 530
Query: 166 S--LTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMI 202
S T +I G + AQ L M E + TW A++
Sbjct: 531 SKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 570
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 175/487 (35%), Positives = 285/487 (58%), Gaps = 14/487 (2%)
Query: 41 THLVQFKQVHAQIIKASF-DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAF 99
T + +Q+HA +++ S N + ++L SL+ I Y+ VF+Q +NP+
Sbjct: 22 TGKLHLRQIHAVLLRTSLIRNSDVFHHFFSRLALSLI-PRDINYSCRVFSQRLNPTLSHC 80
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKAC---GDLRQVKGVHSLVV 155
NT+IR ++ + G +L+ + N + + LK C GDL +H +
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRALRRNISFPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
S F S +T L+ Y + A +FD++ +++ V+W +I+ +++ K R+ +
Sbjct: 141 -SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRDTVSWNVLISCYLRNKRTRDVL 199
Query: 216 DLFRKMR---DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
LF KM+ D V+ + +T + L ACANLGA + GK VH+F+++N + L L
Sbjct: 200 VLFDKMKNDVDRCVKPDNVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLV 259
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
MY++CG +++A VF + E+NV +W ++I GLA++G G+EA++ F +M GI P++
Sbjct: 260 SMYSRCGSMDKAYEVFNRMRERNVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQ 319
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRR-DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
TL +L+ACSH+GL+++G F MR ++K++PN+ HYGC+VDLL RARLLD+AY +I+
Sbjct: 320 TLTGLLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLIK 379
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
+M M+P++ +W +LL AC NVEL E + LI+ + G+YVL+ N Y++ +
Sbjct: 380 SMEMKPDSTIWRTLLGACRVH---GNVELGERVIAHLIEFKAEEAGDYVLLLNTYSSVGK 436
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
W+ ++R LMK++ I NPGCS IE+ VHEF+V D HP EEIY ML + L+
Sbjct: 437 WEKVTELRSLMKKKRIQTNPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKI 496
Query: 512 ECYAARM 518
Y A +
Sbjct: 497 AGYVAEI 503
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 195/567 (34%), Positives = 312/567 (55%), Gaps = 65/567 (11%)
Query: 4 QLVPNSQLTHFTN----SANSHKNSNTATKSHHHL------PLLQKCTHLVQFKQVHAQI 53
Q +P L F N + N HKN TK H++ L+ C + Q KQ HA +
Sbjct: 144 QQLPFLALLIFVNCNIQTQNLHKNM-INTKPFHYVNHSKLSSLIDLCKSINQIKQTHANL 202
Query: 54 IKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
I + I+ +A V + + YAH +F+QI P F +NT+I+ ++ + +
Sbjct: 203 ITTA----QITLPVIANKFLKNVALASLTYAHKLFDQIPQPDLFIYNTMIKSHSMSPHSY 258
Query: 114 -RGIQLYTQMI-GNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVK------------ 156
I ++ +I +G P+ +++ ACG+ +R+ + V + VK
Sbjct: 259 LDSIAVFRSLIRDSGYFPNRYSFVFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNA 318
Query: 157 --------------SKDFNSVI----HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
F+S + +S +I Y G++ A+ LFD+M E++VV+W
Sbjct: 319 LIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSW 378
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
+ +I G+V+ + E +D F KM S V+ NE T+VS L+AC+NL A + GKW+H ++ +
Sbjct: 379 STIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRR 438
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
+ I +ND+L A+L DMYAKCG I+ A VF + +++ V WN++IGG A+HG EEA+
Sbjct: 439 DNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAIN 498
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL 377
+F +M++ + P+ VT IA+L ACSH ++++GK F M DY + P ++HYGC+VDLL
Sbjct: 499 VFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLL 558
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK-LEPFND 436
R+ L ++ E+I +MPM P+ +WG+LL AC D + R+IK ++P +
Sbjct: 559 SRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYKDMER----GYRIGRIIKEIDPNHI 614
Query: 437 GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIV-----KNPGCSVIEINDVVHEFMVGDGR 491
G VL+ NIY+ +W++A R+++E+N + K PG S IE+N V HEF+VGD
Sbjct: 615 GCNVLLGNIYSTSGRWNEA----RMVREKNEINSDRKKIPGFSSIELNGVFHEFLVGDRS 670
Query: 492 HPCSEEIYSMLEYVAISLREECYAARM 518
HP S EIYS L+ + L+ Y +
Sbjct: 671 HPQSREIYSFLDEMISKLKIAGYVPEL 697
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 273/484 (56%), Gaps = 10/484 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP L+ K +H I+A F T LA + + A L+F+ +
Sbjct: 255 LPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYS---KCGSVETARLIFDGMDQ 311
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGV 150
+ ++N+++ GY + G + I ++ +M+ G+DP T L AC GDL + K V
Sbjct: 312 KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFV 371
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H V + S I + LI+ Y V A +F+ + + V+W AMI G+ +
Sbjct: 372 HKFV-DQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGR 430
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E ++ F +M+ G++ + T+VSV+ A A L + KW+H + ++C+ N + A
Sbjct: 431 VSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTA 490
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMY+KCG I A ++F ++ +++V TWN++I G HG G A+ +F +M+ ++P+
Sbjct: 491 LVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPN 550
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
D+T ++V++ACSH+GL+++G F +M++DY +EP++ HYG +VDLL RA + EA++ I
Sbjct: 551 DITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFI 610
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
NMP+ P ++G+ AC N+E+ E A ++L +L P G +VL++NIYA+ +
Sbjct: 611 ENMPISPGITVYGAXXGACKIH---KNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTS 667
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+W ++R+ M+++ + K PGCSV+E+ + VH F G HP S+ IY+ LE + ++
Sbjct: 668 KWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIK 727
Query: 511 EECY 514
Y
Sbjct: 728 AAGY 731
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 191/378 (50%), Gaps = 9/378 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LL+ CT + + Q+ +IK N + T+L L I A VF I +
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKY---GSINEAARVFEPIDDKL 111
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHS 152
++T+++GYA+ + +M + + P + + LLK CGD L++ K +H
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
++ + F + + ++T ++ Y + A +FD+M E+++V+W +I G + +
Sbjct: 172 QLI-TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAK 230
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
+ ++L +M+D G + +TLV+VL A A++G +GK +H + + + AL
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
DMY+KCG +E A +F + +K V +WNS++ G +G E+A+ +F +M GI P V
Sbjct: 291 DMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV 350
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
T++ L AC+ G +E+GK + + + ++ L+ + + + +D A ++ N
Sbjct: 351 TIMEALHACADLGDLERGKFV-HKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNN 409
Query: 393 MPMEPNAVLWGSLLTACA 410
+ + V W +++ A
Sbjct: 410 LNGRTH-VSWNAMILGYA 426
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 171/451 (37%), Positives = 256/451 (56%), Gaps = 8/451 (1%)
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL 127
L LI + A +F+ + P A+N +I GY+ G+ + L+T+++ GL
Sbjct: 250 LTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGL 309
Query: 128 DPDSFTYPILL---KACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQ 184
P+S T L+ G + +H V+KS F + T + T +C D++SA+
Sbjct: 310 WPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKS-GFTANSPVSTAITTLHCRLNDMESAR 368
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
FD M EK + +W AMI+G+ + + LF +M V N +T+ S LSACA LG
Sbjct: 369 KAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLG 428
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
A LGKW+H + + + N + AL DMYAKCG I EA R+F + KNV +WN++I
Sbjct: 429 ALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIA 488
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVE 364
G +HG G EA+K++ M + + P T ++VL ACSH GL+E+G ++F +M DY +
Sbjct: 489 GYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAIN 548
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP-NAVLWGSLLTACASADDGANVELAEI 423
P ++H C+VDLL RA L EA+E+I P +WG+LL AC D +LA++
Sbjct: 549 PGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDS---DLAKL 605
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVH 483
A ++L +L+P N G YVL+SN++ +K Q+ +A +R+ K R +VK PG ++IEI + H
Sbjct: 606 ASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPH 665
Query: 484 EFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
FM GD HP SE IYS LE + + E Y
Sbjct: 666 VFMAGDRAHPQSEAIYSYLEKLTAKMIEAGY 696
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 184/359 (51%), Gaps = 14/359 (3%)
Query: 62 TISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQ 121
T + LAKL L S++ +A VF+ + +P T +NT++ G + G ++ + +
Sbjct: 149 TFVASALAKLYFVL---SRVDHARKVFDTVPSPDTVLWNTLLAGLS----GSEAVESFAR 201
Query: 122 MIGNG-LDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNF 177
M+ +G + PD+ T +L A ++ V + VHS K H LT LI+ Y
Sbjct: 202 MVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKC-GLAEHEHVLTGLISLYSKC 260
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
GDV+SA+ LFD M + ++V + A+I+G+ ++LF ++ G+ N TLV+++
Sbjct: 261 GDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALI 320
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
+ G L + +H FV K+ N + A+T ++ + +E A + F + EK +
Sbjct: 321 PVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTME 380
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
+WN++I G A +G E AV +F QM ++P+ +T+ + L+AC+ G + GK + + +
Sbjct: 381 SWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWL-HRI 439
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
+ +EPNV L+D+ + + EA + M + N V W +++ GA
Sbjct: 440 ITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNK-NVVSWNAMIAGYGLHGQGA 497
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 175/519 (33%), Positives = 287/519 (55%), Gaps = 19/519 (3%)
Query: 9 SQLTHFTNSANSHKNSNTATKSHHHLP---LLQKCT---HLVQFKQVHAQIIKASFDNRT 62
S+ HF ++ + N A S LL+ C+ HL + VHAQ+ + FD
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIINP--STFAFNTVIRGYAEAGLGHRGIQLYT 120
L L ++ A VF + P + ++ ++ YA+ G +++++
Sbjct: 155 FVQNGLIAL---YAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFS 211
Query: 121 QMIGNGLDPDSFTYPILLKA---CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNF 177
QM + PD +L A DL+Q + +H+ VVK L L T Y
Sbjct: 212 QMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK-MGLEIEPDLLISLNTMYAKC 270
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
G V +A++LFD+M N++ W AMI+G+ K RE ID+F +M + V + +++ S +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
SACA +G+ E + ++E+V ++ + + +AL DM+AKCG +E A VF L+++V
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
W+++I G +HG EA+ ++ M+ G+ P+DVT + +L AC+H+G++ +G F+N
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG-WWFFNR 449
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
D+K+ P +HY C++DLL RA LD+AYEVI+ MP++P +WG+LL+AC +
Sbjct: 450 MADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH---RH 506
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
VEL E A ++L ++P N G+YV +SN+YAA WD ++R MKE+ + K+ GCS +E
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 478 INDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
+ + F VGD HP EEI +E++ L+E + A
Sbjct: 567 VRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVA 605
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 208/401 (51%), Gaps = 21/401 (5%)
Query: 14 FTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE 73
+TNS H +S A+ L+ TH Q KQ+HA+++ S + KLI
Sbjct: 13 YTNSG-IHSDSFYAS-------LIDSATHKAQLKQIHARLLVLGLQ---FSGFLITKLIH 61
Query: 74 SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFT 133
+ + I +A VF+ + P F +N +IRGY+ + +Y+ M + PDSFT
Sbjct: 62 ASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFT 121
Query: 134 YPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD-- 188
+P LLKAC L + + VH+ V + F++ + LI Y + SA+ +F+
Sbjct: 122 FPHLLKACSGLSHLQMGRFVHAQVFR-LGFDADVFVQNGLIALYAKCRRLGSARTVFEGL 180
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
+ E+ +V+WTA+++ + + E +++F +MR V+ + + LVSVL+A L +
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G+ +H V K + + L +L MYAKCG + A +F + N+ WN++I G A
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNV 367
+G EA+ MF +M ++PD +++ + ++AC+ G +E+ + ++ Y R DY+ + +
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
L+D+ + ++ A ++ + ++ + V+W +++
Sbjct: 361 S--SALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVG 398
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/517 (34%), Positives = 281/517 (54%), Gaps = 54/517 (10%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+L+ C ++HAQI+ + F + + L L+ ++ + A VF I
Sbjct: 31 FSVLKSCVSFRNLAKIHAQIVVSGFSQK---NYILNHLLSLYISFGSLGSAQKVFEDITA 87
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGV 150
PST +N +I+G+ + + I+L+ +M G++ + FTY LL AC R+ + +
Sbjct: 88 PSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQI 147
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGD-----VKSAQLLFDQMTEKNVVTWTAMINGH 205
H V+ + + S ++ T LI Y N GD +K A+ LFD+M + NVV W +++ G+
Sbjct: 148 HGRVLVN-GYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNSLLAGY 206
Query: 206 VKQKNY-------------------------------REGIDLFRKMRDSGVEVNELTLV 234
V++ ++ + + LF +MR +GVE++++ LV
Sbjct: 207 VRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALV 266
Query: 235 SVLSACANLGASELGKWVHEFVNKNC----IILNDKLGAALTDMYAKCGYIEEALRVFKI 290
+ LSACA LG LGKW+H +V + + + L AL MYA CG ++ A +VF+
Sbjct: 267 AALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFEE 326
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG---IKPDDVTLIAVLTACSHAGLI 347
+ ++N +W+SII G A GCG EA+++F M SG ++PD++T I LTACSHAGLI
Sbjct: 327 IPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLI 386
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
G +F +M + + V P ++HYGC+VDLL RA LL EA +I +MPM+PN +WG+LL+
Sbjct: 387 SDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLS 446
Query: 408 ACASADDGANVELAEIAMERLIKLEPFND--GNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
C + V + +A ++ P N G ++L++N+YAA +W D +RR M +
Sbjct: 447 GCRLHKNDEIV--SHVAKHLSFEIHPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDI 504
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
+ K G S IEIN V+ FMVG+ H IY ML
Sbjct: 505 GVKKPSGRSWIEINGVLCSFMVGEETHKDVNLIYEML 541
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/484 (36%), Positives = 271/484 (55%), Gaps = 14/484 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIK--ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
LP L + Q K++H I++ A D +S L++ + A VF+
Sbjct: 356 LPALTELNGFKQGKEIHGYIVRNCAHVDVFLVS-----ALVDIYFKCRDVRMAQNVFDAT 410
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVK 148
+ +T+I GY + ++++ ++ G+ P++ L AC + R +
Sbjct: 411 KSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQ 470
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
+H V+K+ + + + L+ Y G + + +F +M+ K+ VTW +MI+ +
Sbjct: 471 ELHGYVLKNA-YEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQN 529
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
E +DLFR+M GV+ N +T+ S+LSACA L A GK +H + K I +
Sbjct: 530 GEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAE 589
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+AL DMY KCG +E ALRVF+ + EKN +WNSII HG +E+V + MQ G K
Sbjct: 590 SALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFK 649
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
D VT +A+++AC+HAG +++G +F M +Y +EP V+H C+VDL RA LD+A +
Sbjct: 650 ADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQ 709
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
I +MP +P+A +WG+LL AC NVELAEIA + L KL+P N G YVLMSNI A
Sbjct: 710 FIADMPFKPDAGIWGALLHACRVHR---NVELAEIASQELFKLDPHNCGYYVLMSNINAV 766
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
+WD KMRRLMK++ + K PG S +++N+ H F+ D HP SEEIY L+ + I
Sbjct: 767 AGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIE 826
Query: 509 LREE 512
L++E
Sbjct: 827 LKQE 830
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 208/444 (46%), Gaps = 49/444 (11%)
Query: 14 FTNSANSHKNSNTATKSHHHLPLLQKC---THLVQFKQVHAQIIKASF-DNRTISDTQL- 68
F+ +A+S N++ ++ L LL+ C +HL ++HA+ + + D L
Sbjct: 22 FSETASSATNASPC--AYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQ 79
Query: 69 AKLIESLVNSSQIAYAHLVFNQI---INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG- 124
+L+ V + + A VF+ + + +N +IRG+ AG + Y +M
Sbjct: 80 TRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAH 139
Query: 125 -NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
+ PD T P ++K+C G L + VH ++ + ++ + LI Y + G +
Sbjct: 140 PSSPRPDGHTLPYVVKSCAALGALHLGRLVHR-TTRALGLDRDMYVGSALIKMYADAGLL 198
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
A+ +FD M E++ V W M++G+VK + + LFR MR SG + N TL LS C
Sbjct: 199 DGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVC 258
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A G +H K + + L MYAKC +EEA R+F ++ ++ TWN
Sbjct: 259 AAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWN 318
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI------- 353
+I G +G ++A+++F MQ SG++PD VTL ++L A + ++GKEI
Sbjct: 319 GMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRN 378
Query: 354 --------------FYNMRRDYKVEPNVKHYGCLVDLLCRA---------RLLDEAYEVI 390
Y RD ++ NV +D++ + R+ + A ++
Sbjct: 379 CAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMF 438
Query: 391 R---NMPMEPNAVLWGSLLTACAS 411
R + ++PNAV+ S L ACAS
Sbjct: 439 RYLLALGIKPNAVMVASTLPACAS 462
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 188/386 (48%), Gaps = 13/386 (3%)
Query: 69 AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD 128
+ LI+ ++ + A VF+ + +N ++ GY +AG + L+ M +G D
Sbjct: 186 SALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCD 245
Query: 129 PDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL 185
P+ T L C DL +H+L VK + L++ Y ++ A
Sbjct: 246 PNFATLACFLSVCAAEADLLSGVQLHTLAVK-YGLEPEVAVANTLVSMYAKCQCLEEAWR 304
Query: 186 LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA 245
LF M ++VTW MI+G V+ + + LF M+ SG++ + +TL S+L A L
Sbjct: 305 LFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNG 364
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
+ GK +H ++ +NC ++ L +AL D+Y KC + A VF +V +++I G
Sbjct: 365 FKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISG 424
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVE 364
++ E AVKMF + GIKP+ V + + L AC+ + G+E+ Y ++ Y+
Sbjct: 425 YVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGR 484
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIA 424
V+ L+D+ + LD ++ + M + + V W S+++ + A +G E ++
Sbjct: 485 CYVE--SALMDMYSKCGRLDLSHYMFSKMSAK-DEVTWNSMIS--SFAQNGEPEEALDLF 539
Query: 425 MERLIKLEPFNDGNYVLMSNIYAAKA 450
+ +++ +N+ V +S+I +A A
Sbjct: 540 RQMIMEGVKYNN---VTISSILSACA 562
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 230/344 (66%), Gaps = 3/344 (0%)
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
LT +I+ Y G V+ A+L+FDQM EK++V W+AMI+G+ + +E ++LF +M+ G+
Sbjct: 17 LTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFGI 76
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
+ +++T++SV+SACA LG + KW+H +V+KN + + AL DMYAKCG + A
Sbjct: 77 KPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARG 136
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF+ + +NV +W S+I AIHG A+K F+QM+ IKP+ VT + VL ACSHAGL
Sbjct: 137 VFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAGL 196
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+E+G+ F +M ++ + P +HYGC+VDL RA LL +A E++ MP+ PN V+WGSL+
Sbjct: 197 VEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIWGSLM 256
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
AC G N EL E A +++++LEP +DG V +SNIYA +W D G++R LMK+R
Sbjct: 257 AACQI--HGEN-ELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMKQRG 313
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
I K GCS IE+N+ V+EF++ D +H +++IY L+ V L+
Sbjct: 314 ISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELK 357
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 129/268 (48%), Gaps = 8/268 (2%)
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL 127
L +I ++ A L+F+Q+ ++ +I GYAE+ + L+++M G+
Sbjct: 17 LTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFGI 76
Query: 128 DPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQ 184
PD T ++ AC G L + K +H + V + LI Y G++ +A+
Sbjct: 77 KPDQVTILSVISACARLGVLDRAKWIH-MYVDKNGLGGALPVNNALIDMYAKCGNLGAAR 135
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
+F++M +NV++WT+MIN + + F +M+D ++ N +T V VL AC++ G
Sbjct: 136 GVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAG 195
Query: 245 ASELGKWVH-EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSI 302
E G+ N++ I + + D++ + + +AL + + + L NV W S+
Sbjct: 196 LVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIWGSL 255
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
+ IH GE + F Q+ ++PD
Sbjct: 256 MAACQIH--GENELGEFAAKQVLELEPD 281
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 269/490 (54%), Gaps = 22/490 (4%)
Query: 31 HHHLP-------LLQKCTHL---VQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ 80
H +LP +++ C L + KQ+H +K F + L + +
Sbjct: 106 HEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYS---KCGE 162
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
I A VF+ +I+ +N++I GYA G +QL+ +M + D+F++ +L+
Sbjct: 163 IDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMP----ERDAFSWTVLVDG 218
Query: 141 CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
+V+ L + N V S +I Y GD SA LF QM ++VTW
Sbjct: 219 LSKCGKVESARKLFDQMPCRNLV--SWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNL 276
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
MI G+ + + + +F M G + TLVSVLSA + L G+W+H ++ KN
Sbjct: 277 MIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNG 336
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
L+ LG +L +MYAKCG IE AL VF+ + +K V W +II GL IHG A+ +F
Sbjct: 337 FELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFL 396
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M +G+KP+ + I VL AC+HAGL++ G++ F M +YK+EP ++HYGCLVD+LCRA
Sbjct: 397 EMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRA 456
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
L+EA I NMP+ PN V+W SLL + + +++ E A +R+I++ P G Y+
Sbjct: 457 GHLEEAKNTIENMPISPNKVIWMSLL---GGSRNHGKIDIGEYAAQRVIEVAPETIGCYI 513
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYS 500
L+SN+YAA W+ +R +M +R K+PGCS +E +HEF+VGD HP ++EIY+
Sbjct: 514 LLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYA 573
Query: 501 MLEYVAISLR 510
+ + L+
Sbjct: 574 KMSEMKEKLK 583
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 168/322 (52%), Gaps = 20/322 (6%)
Query: 45 QFKQVHAQIIK-ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
+ +Q+HA +K A F++ +S LA + +N + YA +F++I S +NT+I
Sbjct: 28 EVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKIN--DLGYARSIFDRIQRRSLIHWNTII 85
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDF 160
+ Y E H GI L+ +++ L PD+FT P ++K C G +++ K +H L +K F
Sbjct: 86 KCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKI-GF 143
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
S + L+ Y G++ A+ +FD M +K+VV W ++I+G+ + + LF +
Sbjct: 144 GSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEE 203
Query: 221 M--RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
M RD+ + LV LS C + ++ K + +N + N A+ + Y K
Sbjct: 204 MPERDA---FSWTVLVDGLSKCGKVESAR--KLFDQMPCRNLVSWN-----AMINGYMKS 253
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G + AL +F + ++ TWN +I G ++G +AVKMF+ M G +P TL++VL
Sbjct: 254 GDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVL 313
Query: 339 TACSHAGLIEKGKEIFYNMRRD 360
+A S ++ KG+ I M ++
Sbjct: 314 SAVSGLAVLGKGRWIHSYMEKN 335
>gi|449470352|ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 279/476 (58%), Gaps = 10/476 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LLQ C L + +++HA +I + + +L V+ S +AYA L+F+Q+
Sbjct: 8 LALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGS-LAYAQLLFHQMEC 66
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD-PDSFTYPILLKACGDL---RQVKG 149
P T A+N++IRG+A++ I Y QM+ + PD+FT+ +LKAC + R+ K
Sbjct: 67 PQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKAERKCKE 126
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
VH V++ +++ + T L+ Y G V A+ +FD+M +++V W AMI+ +Q
Sbjct: 127 VHGSVIRC-GYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISCFSQQG 185
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
++E + + +MR V+++ TLV ++S+CA+LGA +G +H F +N + + +G
Sbjct: 186 LHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGN 245
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG +++A+ +F + K++ TWNS+I G +HG G EA+ F QM + I+P
Sbjct: 246 ALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQP 305
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+ VT + +L CSH GL+++G + F M ++++P VKHYGCLVDL RA LD+A E+
Sbjct: 306 NPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEI 365
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
+ N ++VLW LL +C NV + EIAM RL +L + G+ +L++ IYA +
Sbjct: 366 VSN-SSHNDSVLWRILLGSCKIHK---NVTIGEIAMNRLSELGATSAGDCILLATIYAGE 421
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
+MR+++K + PG S IEI + VH+F+V D H S E+Y L V
Sbjct: 422 KDKAGVARMRKMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREV 477
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/470 (38%), Positives = 266/470 (56%), Gaps = 12/470 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS--TFAFNTVIRG 105
Q H QI K T LI S + A VF + + T +N ++ G
Sbjct: 70 QFHGQITKVGCVFEPFVQT---GLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSG 126
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNS 162
Y + L+ QM G+ +S T L+ AC +L +H +K F+S
Sbjct: 127 YVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKY-GFDS 185
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ + IT Y G V AQ LFD+M K +++W AM++G+ + ++L+R M
Sbjct: 186 DVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMD 245
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+GV + +TLV VLS+CANLGA +G V + + N L AL +MYA+CG +
Sbjct: 246 MNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLT 305
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+A VF + E+ + +W +IIGG +HG GE AV++F +M SGI+PD + VL+ACS
Sbjct: 306 KAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACS 365
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
HAGL ++G E F M+R+Y++EP +HY C+VDLL RA L EA +I +MP++P+ +W
Sbjct: 366 HAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVW 425
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL AC NVELAE+A ER+I+LEP N G YVL+SNIY+ ++R +M
Sbjct: 426 GALLGACKIHK---NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMM 482
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
KE+ + K+PGCS +E+ VH F+VGD H S+EIY +LE + + +E
Sbjct: 483 KEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQE 532
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 189/395 (47%), Gaps = 29/395 (7%)
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVH 151
+N + +NT +R A+ + + LY QM+ +G P++FT+P LK+C L
Sbjct: 10 MNALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAAL------- 62
Query: 152 SLVVKSKDFNSVIHSL---------TRLITFYCNFGDVKSAQLLFDQ--MTEKNVVTWTA 200
SL + F+ I + T LI+ YC V +A+ +F++ + K V + A
Sbjct: 63 SLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNA 122
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
+++G+V E + LFR+M + GV VN +TL+ ++ AC + ELG +H K
Sbjct: 123 LVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYG 182
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ + MY KCG + A ++F + K + +WN+++ G A +G ++++
Sbjct: 183 FDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYR 242
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD-YKVEPNVKHYGCLVDLLCR 379
M M+G+ PD VTL+ VL++C++ G G E+ + ++ + P + + L+++ R
Sbjct: 243 NMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNN--ALINMYAR 300
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK--LEPFNDG 437
L +A V MP E V W +++ G E+A + +I+ +EP DG
Sbjct: 301 CGNLTKAQAVFDGMP-ERTLVSWTAIIGGYGMHGHG---EIAVQLFKEMIRSGIEP--DG 354
Query: 438 NYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
+ + A D G M +RN PG
Sbjct: 355 TAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPG 389
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/496 (34%), Positives = 277/496 (55%), Gaps = 38/496 (7%)
Query: 55 KASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
+ +FD + D + A +I LV + A + Q + ++ ++I GY+ AG
Sbjct: 158 RRAFDEVPVKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPA 217
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK------------ 158
+ + M+ +G++PD L AC L+ + + +H LV K +
Sbjct: 218 DAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLI 277
Query: 159 ----------DFNSVIHSLTR---------LITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
+V ++ R +I YC G V A+ LFDQM ++V+T+
Sbjct: 278 DMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFN 337
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
+MI G++ R+ + LF ++R G+ + T+VS+L+ACA+LGA G+ +H + +
Sbjct: 338 SMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQR 397
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ + L AL DMY KCG ++EA VF + E++V TW+++I GLA +G G +A++ F
Sbjct: 398 IVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESF 457
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
QM+ G +P VT IAVLTACSH+ L+ +G++ F MR +K+ P ++HYGC++DLL R
Sbjct: 458 CQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLAR 517
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
+ LLDEA +++ MPM+PNAV+W S+L+AC N++LA A E L+KL P D Y
Sbjct: 518 SGLLDEAMHLVQTMPMQPNAVIWASILSACRVHK---NIDLARHAAEHLLKLAPEEDAVY 574
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
V + NIY QW +A ++R LM+E+ + K G S I + VH+F+V D HP + EI
Sbjct: 575 VQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQVHKFVVNDQSHPWTLEII 634
Query: 500 SMLEYVAISLREECYA 515
+M+E +A L+ Y+
Sbjct: 635 TMMEEIARRLKSAGYS 650
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 190/435 (43%), Gaps = 72/435 (16%)
Query: 45 QFKQVHAQIIKAS-FDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
Q Q+HA + + +R ++ L L L + Y +F+++ +P+TF +T +
Sbjct: 14 QASQLHAILTTSGRIAHRPSAEHLLNSLTNCLSAPRHLRYVLSLFDRLPHPTTFLHDTAL 73
Query: 104 RG--YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSK 158
R A AG H + + +M G+ +FT+ + + C + +H+ +++
Sbjct: 74 RACLQASAGADH-PVLILRRMRRGGVRMSAFTFHFVFRCCAAGAGAGLCRMLHAACLRTM 132
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK------------------------- 193
++ LI Y + G A+ FD++ K
Sbjct: 133 LPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGLVRWGLLDEARRLL 192
Query: 194 ------NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
NVV+WT++I G+ + + + F M GVE +E+ ++ LSAC+ L E
Sbjct: 193 VQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLE 252
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE-------------- 293
G+ +H V K I + DKL L DMYAKCG I +A VF V
Sbjct: 253 FGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGY 312
Query: 294 ------------------KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
++V T+NS+I G G +A+++F Q++ G++ D+ T++
Sbjct: 313 CKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVV 372
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
++LTAC+ G + +G+ + ++ + VE +V LVD+ + +DEA V M
Sbjct: 373 SLLTACASLGALPQGRALHASIEQRI-VEEDVYLVTALVDMYMKCGRVDEATAVFHRMG- 430
Query: 396 EPNAVLWGSLLTACA 410
E + W +++ A
Sbjct: 431 ERDVHTWSAMIAGLA 445
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/480 (35%), Positives = 273/480 (56%), Gaps = 43/480 (8%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
+ + C + KQ+HA + N ++ ++ + ++ S + YA +F+Q+ P+
Sbjct: 22 IAENCQSMNHLKQIHAHSLLTDLHNHSVILGKMLRF-AAVSPSGDLPYAQRLFDQMPQPN 80
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG------ 149
TF +NT+IRGYA++ + L+ QM N +DPD FT+ L+KA + +V
Sbjct: 81 TFFYNTIIRGYAKSSSPSYCVNLFNQMRQNHVDPDEFTFNFLIKARSRVHKVHNFPSTLE 140
Query: 150 ---VHSLVVKS--------------------------KDFNSVIH----SLTRLITFYCN 176
+H V K + FN + S + L+ +
Sbjct: 141 CDEIHGAVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNETVGVDVVSWSGLVLAHVR 200
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
G+++ A+ +FD M EK+VV+WTAM++G+ K RE ++LF +M D+G+ +E+T+VSV
Sbjct: 201 GGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMSDAGIRPDEVTIVSV 260
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
+SAC NLG E G VH ++N+N L AL +MYAKCG ++ A RVF + K++
Sbjct: 261 ISACTNLGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGCVDRAWRVFNNMKRKSL 320
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
TWNS+I A HG E+A ++F M SGI PD +T +A+L A +H GL+++G +F
Sbjct: 321 ITWNSMISACANHGYAEDAFELFSCMLNSGIAPDGITFLALLIAYTHKGLVDEGYRLFQI 380
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
M RDY +E +++HYGC+VD+L RA L+EAYE+I MP+ N ++WG+LL AC D
Sbjct: 381 MERDYGIEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIPSNDIVWGALLAACRIYGD-- 438
Query: 417 NVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
V + E +++L++L+P G Y+L+ +IY A + +A +R+ M+E +KNPG S +
Sbjct: 439 -VNMGERVVKKLLELKPDEGGYYILLRDIYVASGRTAEANHIRQAMQESGAMKNPGYSWV 497
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/446 (36%), Positives = 256/446 (57%), Gaps = 9/446 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I + ++ A +F + F + ++ GY + G+ +++ M + +
Sbjct: 160 MISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP----EKN 215
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
S ++ ++ +++ L N + S +IT Y GD+ A+ FD+M
Sbjct: 216 SVSWNAIIAGYVQCKRMDQARELFEAMPCQN--VSSWNTMITGYAQNGDIAQARNFFDRM 273
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
+++ ++W A+I G+ + E + LF +M+ G +N T S LS CA + A ELGK
Sbjct: 274 PQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGK 333
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
VH V K + +G AL MY KCG I++A VF+ + EK V +WN++I G A HG
Sbjct: 334 QVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHG 393
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
G+EA+ +F M+ +GI PDDVT++ VL+ACSH GL++KG E FY+M +DY + N KHY
Sbjct: 394 FGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHY 453
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
C++DLL RA LD+A +++NMP EP+A WG+LL A N EL E A + + +
Sbjct: 454 TCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIH---GNTELGEKAAKMIFE 510
Query: 431 LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
+EP N G YVL+SN+YAA +W D G+MR M++R + K PG S +E+ + +H F VGD
Sbjct: 511 MEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDS 570
Query: 491 RHPCSEEIYSMLEYVAISLREECYAA 516
HP + IY+ LE + + +++E Y +
Sbjct: 571 VHPERDRIYTFLEELDLKMKKEGYVS 596
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 173/410 (42%), Gaps = 55/410 (13%)
Query: 32 HHLPLLQKCTHLVQFK-QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
HH P ++ L Q+HA FD D + V + A L+F+Q
Sbjct: 5 HHQPHAKRTMRLRSPPLQLHAS---PEFDFLERHD------LRGCVRYRNLRAARLLFDQ 55
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGV 150
+ ++N ++ GYA+ G +++ +M +S ++ +L A +++
Sbjct: 56 MPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNGRIEDA 111
Query: 151 HSLVVKSKDF---------------NSVIH--------------SLTRLITFYCNFGDVK 181
L D+ N ++ S +I+ Y G++
Sbjct: 112 RRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELL 171
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
AQ LF++ ++V TWTAM++G+V+ +D R++ D E N ++ ++++
Sbjct: 172 EAQRLFEESPVRDVFTWTAMVSGYVQNGM----LDEARRVFDGMPEKNSVSWNAIIAGYV 227
Query: 242 NLGASELGKWVHEFVN-KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
+ + + E + +N N + YA+ G I +A F + +++ +W
Sbjct: 228 QCKRMDQARELFEAMPCQNVSSWN-----TMITGYAQNGDIAQARNFFDRMPQRDSISWA 282
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
+II G A G GEEA+ +F +M+ G + + T + L+ C+ +E GK++ + +
Sbjct: 283 AIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKA 342
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+E L+ + C+ +D+AY V + E V W +++ A
Sbjct: 343 -GLESGCYVGNALLVMYCKCGNIDDAYIVFEGIE-EKEVVSWNTMIAGYA 390
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 121/244 (49%), Gaps = 30/244 (12%)
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
+ ++++A+LLFDQM E++VV+W AM++G+ + +E ++F +M N ++ +
Sbjct: 43 YRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGM 98
Query: 237 LSACANLGASELGKWVH------EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI 290
L+A G E + + E ++ NC++ Y K + +A +F
Sbjct: 99 LAAYVQNGRIEDARRLFESKADWELISWNCMMGG----------YVKRNRLVDARGIFDR 148
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+ E++ +WN++I G A +G EA ++F + S ++ D T A+++ G++++
Sbjct: 149 MPERDEVSWNTMISGYAQNGELLEAQRLF---EESPVR-DVFTWTAMVSGYVQNGMLDEA 204
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ +F M E N + ++ + + +D+A E+ MP + N W +++T A
Sbjct: 205 RRVFDGM-----PEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITGYA 258
Query: 411 SADD 414
D
Sbjct: 259 QNGD 262
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 7/160 (4%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQVH +++KA ++ L + I A++VF I ++NT+I GY
Sbjct: 333 KQVHGRVVKAGLESGCYVGNALLVM---YCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGY 389
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-KGVHSLVVKSKDFNSVIH 165
A G G + L+ M G+ PD T +L AC V KG ++D+ +
Sbjct: 390 ARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITAN 449
Query: 166 S--LTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMI 202
S T +I G + AQ L M E + TW A++
Sbjct: 450 SKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 489
>gi|359491319|ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400-like [Vitis vinifera]
Length = 482
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/405 (39%), Positives = 252/405 (62%), Gaps = 28/405 (6%)
Query: 130 DSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
DSF+ LKAC L + K +H+LV+ + F +I T LI+ Y G+V A +
Sbjct: 69 DSFSLMFALKACTLKSSLVEGKQMHALVI-NFGFEPIIFLQTSLISMYSATGNVADAHNM 127
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD++ KN+++WT++I+ +V + + + LFR+M+ V+ + +T+ LSACA+LGA
Sbjct: 128 FDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGAL 187
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
++G+W+H ++ + + L +L +MY+KCG I A R+F +K+V TW S+I G
Sbjct: 188 DMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGH 247
Query: 307 AIHGCGEEAVKMFWQM----------------QMSGIKPDDVTLIAVLTACSHAGLIEKG 350
A+HG EEA+++F +M + S + P+DVT + VL ACSHAGL+E+G
Sbjct: 248 ALHGQAEEALQLFTEMKETNKRARKNKRNGEHESSLVLPNDVTFMGVLMACSHAGLVEEG 307
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
K+ F +M+ DY + P + H+GC+VDLLCRA LL EAYE I MP+ PNAV+W +LL AC+
Sbjct: 308 KQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVRPNAVVWRTLLGACS 367
Query: 411 SADDG-----ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
D +N+++ A +L++LEP + G+ V+MSN+YAAK WD +R +K+R
Sbjct: 368 LQGDSNGNGNSNIKIYSEARRQLLELEPSHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQR 427
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
++PGCS IE+ + EF+ D +HPC +IY +L+++ ++R
Sbjct: 428 ---RDPGCSSIEVGIDIKEFVAADDQHPCMPQIYEILDHLTRTMR 469
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 159/344 (46%), Gaps = 40/344 (11%)
Query: 2 LKQLVPNSQLTHFTNSANSHK----------NSNTATKSHHHLPLLQKCT---HLVQFKQ 48
LK N L + S+N+ K + ++ S + L+ CT LV+ KQ
Sbjct: 32 LKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQ 91
Query: 49 VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE 108
+HA +I F+ T L + + N +A AH +F++I + + ++ +VI Y +
Sbjct: 92 MHALVINFGFEPIIFLQTSLISMYSATGN---VADAHNMFDEIPSKNLISWTSVISAYVD 148
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIH 165
++ +QL+ QM + + PD T + L AC DL + + +H+ ++ + ++ +
Sbjct: 149 NQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHA-YIRHRGLDTDLC 207
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
LI Y G++ +A+ LFD +K+V TWT+MI GH E + LF +M+++
Sbjct: 208 LNNSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETN 267
Query: 226 ----------------VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG- 268
V N++T + VL AC++ G E GK H K L ++
Sbjct: 268 KRARKNKRNGEHESSLVLPNDVTFMGVLMACSHAGLVEEGKQ-HFRSMKEDYSLRPRISH 326
Query: 269 -AALTDMYAKCGYIEEALR-VFKIVLEKNVCTWNSIIGGLAIHG 310
+ D+ + G + EA + K+ + N W +++G ++ G
Sbjct: 327 FGCMVDLLCRAGLLTEAYEFILKMPVRPNAVVWRTLLGACSLQG 370
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/484 (33%), Positives = 277/484 (57%), Gaps = 10/484 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP + L + +H ++A F++ T L ++ + A L+F+++
Sbjct: 283 LPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTAL---VDMYSKCGSVGTARLIFDRMTG 339
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGV 150
+ ++N++I GY + G ++++ +M+ ++ + T L AC GD+ Q + V
Sbjct: 340 KTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFV 399
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H L+ + S + + LI+ Y V A +F+ + K +V+W AMI G+ +
Sbjct: 400 HKLL-DQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGR 458
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E ID F KM+ ++ + T+VSV+ A A L KW+H V + C+ N + A
Sbjct: 459 INEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATA 518
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMYAKCG + A ++F ++ E++V TWN++I G HG G+ A+++F +M+ IKP+
Sbjct: 519 LVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPN 578
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+VT + VL+ACSH+GL+E+G + F +M++DY +EP + HYG +VDLL RA L+EA++ I
Sbjct: 579 EVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFI 638
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+ MP+EP ++G++L AC NVEL E A R+ L+P + G +VL++NIYA +
Sbjct: 639 QKMPIEPAISVFGAMLGACRIHK---NVELGEKAANRIFDLDPDDGGYHVLLANIYATAS 695
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
WD ++R M+++ I K PG SV+E+ + VH F G HP +++IY+ LE + ++
Sbjct: 696 MWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIK 755
Query: 511 EECY 514
Y
Sbjct: 756 AAGY 759
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 214/402 (53%), Gaps = 13/402 (3%)
Query: 36 LLQKC---THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL+ C L + K++H Q+I F + + T + + + A+ +F+++
Sbjct: 181 LLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNM---YAKCRLVEEAYKMFDRMP 237
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKG 149
+NT+I GYA+ G G ++L +M G PDS T +L A D LR +
Sbjct: 238 ERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRS 297
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H +++ F S ++ T L+ Y G V +A+L+FD+MT K VV+W +MI+G+V+
Sbjct: 298 IHGYSMRA-GFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNG 356
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ +++F+KM D VE+ +T++ L ACA+LG E G++VH+ +++ + + +
Sbjct: 357 DPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMN 416
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
+L MY+KC ++ A +F+ + K + +WN++I G A +G EA+ F +MQ+ IKP
Sbjct: 417 SLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKP 476
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D T+++V+ A + ++ + K I + R ++ NV LVD+ + + A ++
Sbjct: 477 DSFTMVSVIPALAELSVLPQAKWIHGLVIRTC-LDKNVFVATALVDMYAKCGAVHTARKL 535
Query: 390 IRNMPMEPNAVLWGSLLTACASADDG-ANVELAEIAMERLIK 430
+M E + W +++ + G A +EL E + +IK
Sbjct: 536 F-DMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIK 576
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 200/402 (49%), Gaps = 13/402 (3%)
Query: 13 HFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLI 72
H T S+ ++ S+ H LL+ CT + + Q IIK + + T+L L
Sbjct: 62 HRTPSSRTYIPSHVY--KHPSAILLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSL- 118
Query: 73 ESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSF 132
+ A VF I + ++T+++GYA + + +M +G+ P +
Sbjct: 119 --FCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVY 176
Query: 133 TYPILLKACG---DLRQVKGVH-SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
+ LLK CG DLR+ K +H L+V F S + ++T ++ Y V+ A +FD
Sbjct: 177 NFTYLLKVCGDNADLRKGKEIHCQLIVNG--FASNVFAMTGVVNMYAKCRLVEEAYKMFD 234
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
+M E+++V W +I+G+ + + ++L +M++ G + +T+VS+L A A++G+ +
Sbjct: 235 RMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRI 294
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G+ +H + + + AL DMY+KCG + A +F + K V +WNS+I G
Sbjct: 295 GRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQ 354
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
+G A+++F +M ++ +VT++ L AC+ G +E+G+ + + + ++ +V
Sbjct: 355 NGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFV-HKLLDQLELGSDVS 413
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
L+ + + + +D A E+ N+ V W +++ A
Sbjct: 414 VMNSLISMYSKCKRVDIAAEIFENL-QHKTLVSWNAMILGYA 454
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 150/298 (50%), Gaps = 6/298 (2%)
Query: 136 ILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
ILL+ C ++++ L++K+ ++ + T+L++ +C FG + A +F + +K
Sbjct: 82 ILLELCTSMKELHQFIPLIIKNGLYSEHLFQ-TKLVSLFCKFGSLHEAARVFQPIEDKID 140
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
+ M+ G+ + + + + F +MR GV +L C + GK +H
Sbjct: 141 ELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQ 200
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
+ N N + +MYAKC +EEA ++F + E+++ WN+II G A +G G+ A
Sbjct: 201 LIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTA 260
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLV 374
+++ +MQ G +PD +T++++L A + G + G+ I Y+MR ++ NV LV
Sbjct: 261 LELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVS--TALV 318
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA-CASADDGANVELAEIAMERLIKL 431
D+ + + A + M + V W S++ + D GA +E+ + M+ +++
Sbjct: 319 DMYSKCGSVGTARLIFDRMTGK-TVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEM 375
>gi|449477795|ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/476 (36%), Positives = 279/476 (58%), Gaps = 10/476 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LLQ C L + +++HA +I + + +L V+ S +AYA L+F+Q+
Sbjct: 8 LALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGS-LAYAQLLFHQMEC 66
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD-PDSFTYPILLKACGDL---RQVKG 149
P T A+N++IRG+A++ I Y QM+ + PD+FT+ +LKAC + R+ K
Sbjct: 67 PQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKAERKCKE 126
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
VH V++ +++ + T L+ Y G V A+ +FD+M +++V W AMI+ +Q
Sbjct: 127 VHGSVIRC-GYDADVIVCTNLVKCYSAMGLVCIARQVFDKMPARDLVAWNAMISCFSQQG 185
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
++E + + +MR V+V+ TLV ++S+CA+LGA +G +H F +N + + +G
Sbjct: 186 LHQEALQTYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGN 245
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG +++A+ +F + K++ TWNS+I G +HG G EA+ F QM + I+P
Sbjct: 246 ALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQP 305
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+ VT + +L CSH GL+++G + F M ++++P VKHYGCLVDL RA LD+A E+
Sbjct: 306 NPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEI 365
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
+ N ++VLW LL +C NV + EIAM RL +L + G+ +L++ IYA +
Sbjct: 366 VSN-SSHNDSVLWRILLGSCKIHK---NVTIGEIAMNRLSELGATSAGDCILLATIYAGE 421
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
+MR+++K + PG S IEI + VH+F+V D H S E+Y L V
Sbjct: 422 KDKAGVARMRKMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREV 477
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 262/440 (59%), Gaps = 12/440 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A LVF ++++ ++N +I + + G + + L+ M+ +G++PD FTY +LKAC
Sbjct: 430 ACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAG 489
Query: 144 LRQVK---GVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
+ + +H+ ++KS+ +S + LI Y G ++ A+ L D++ E+ VV+W
Sbjct: 490 WQALNCGMEIHNRIIKSRLGLDSFVG--IALIDMYSKCGMMEKAEKLHDRLAEQTVVSWN 547
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
A+I+G QK E F KM + GV+ + T ++L CANL ELGK +H + K
Sbjct: 548 AIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK 607
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ + + + L DMY+KCG +++ +F+ ++ TWN+++ G A HG GEEA+K+F
Sbjct: 608 ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIF 667
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
MQ+ +KP+ T +AVL AC H GL+EKG F++M +Y ++P ++HY C+VD++ R
Sbjct: 668 EYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGR 727
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
+ + +A E+I MP E +AV+W +LL+ C NVE+AE A +++LEP + Y
Sbjct: 728 SGQVSKALELIEGMPFEADAVIWRTLLSICKIH---GNVEVAEKAAYSILQLEPEDSAAY 784
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
VL+SNIYA W++ K+R++M+ + K PGCS IEI VH F+VGD HP S+EIY
Sbjct: 785 VLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIY 844
Query: 500 SMLEYVAISLREECYAARMP 519
L+ + ++ + MP
Sbjct: 845 ENLDVLTDEMK---WVGYMP 861
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 188/380 (49%), Gaps = 13/380 (3%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
Q+H +K F + T ++ + + ++ A +FN + N + ++N +I GYA
Sbjct: 296 QLHGHALKTDFGTDVVIGT---ATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYA 352
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC----GDLRQVKGVHSLVVKSKDFNSV 163
+ G + ++ + +GL D + +AC GDL ++ VH L +KS S
Sbjct: 353 RSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQ-VHGLSMKSL-CQSN 410
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
I ++ Y G + A L+F++M ++ V+W A+I H + N + + LF M
Sbjct: 411 ICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQ 470
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
SG+E +E T SVL ACA A G +H + K+ + L+ +G AL DMY+KCG +E+
Sbjct: 471 SGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEK 530
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A ++ + E+ V +WN+II G ++ EEA K F +M G+ PD+ T +L C++
Sbjct: 531 AEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCAN 590
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
+E GK+I + + +++ + LVD+ + + + + P + V W
Sbjct: 591 LVTVELGKQIHAQIIKK-ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP-NRDFVTWN 648
Query: 404 SLLTACASADDGANVELAEI 423
+++ C A G E +I
Sbjct: 649 AMV--CGYAQHGLGEEALKI 666
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 201/427 (47%), Gaps = 45/427 (10%)
Query: 19 NSHKNSNTATKSHHHLPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKLIESL 75
+S++ + T K+ H+ Q+C+ L KQ HA++I F T+ T LI+
Sbjct: 33 SSYQATPTKKKTFSHI--FQECSDRKALCPGKQAHARMILTEF-KPTVFVTNC--LIQMY 87
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE--------------------------A 109
+ S + +A VF+ + T ++N ++ GYA +
Sbjct: 88 IKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLIS 147
Query: 110 GLGHRG-----IQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFN 161
G H G I ++ QM G D T+ ++LK+C L G +H L VK F+
Sbjct: 148 GYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVK-MGFD 206
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
+ + + L+ Y + + F M EKN V+W+A+I G V+ + R G++LF++M
Sbjct: 207 CDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEM 266
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
+ +GV V++ T SV +CA L A LG +H K + +G A DMY KC +
Sbjct: 267 QKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNL 326
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
+A ++F + N+ ++N+II G A G EA+ MF +Q SG+ D+V+L AC
Sbjct: 327 SDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRAC 386
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
+ +G ++ + + + N+ ++D+ + L EA V M + +AV
Sbjct: 387 AVIKGDLEGLQV-HGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVS 444
Query: 402 WGSLLTA 408
W +++ A
Sbjct: 445 WNAIIAA 451
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 152/320 (47%), Gaps = 16/320 (5%)
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLK---ACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLI 171
G Q + +MI P F L++ C DL V + + S ++
Sbjct: 61 GKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTV-----SWNAML 115
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
Y GD+ AQ LFD M E++VV+W ++I+G++ ++R+ ID+F +M G +
Sbjct: 116 FGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRT 175
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
T VL +C++L G +H K + G+AL DMYAKC ++ +++ F +
Sbjct: 176 TFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSM 235
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
EKN +W++II G + +++F +MQ +G+ T +V +C+ + G
Sbjct: 236 PEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGS 295
Query: 352 EIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
++ + ++ D+ + + +D+ + L +A ++ ++P N + +++ A
Sbjct: 296 QLHGHALKTDFGTDVVIGT--ATLDMYMKCNNLSDAQKLFNSLP-NHNLQSYNAIIVGYA 352
Query: 411 SADDGANVELAEIAMERLIK 430
+D G + + M RL++
Sbjct: 353 RSDKG----IEALGMFRLLQ 368
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 10/175 (5%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L C +LV KQ+HAQIIK + + L + N L+F +
Sbjct: 584 ILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDF---QLIFEKAP 640
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-KGVH 151
N +N ++ GYA+ GLG ++++ M + P+ T+ +L+ACG + V KG+H
Sbjct: 641 NRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLH 700
Query: 152 SL--VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMIN 203
++ + + + + ++ G V A L + M E + V W +++
Sbjct: 701 YFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 755
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/473 (36%), Positives = 273/473 (57%), Gaps = 17/473 (3%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSS--QIAYAHLVFNQ 90
LL+ C+ V + +HAQ+ K F + LI+S +A A VF
Sbjct: 121 LLKACSGKVWVRVVEMIHAQVEKMGF---CLDIFVPNSLIDSYFKCGLDGVAAARKVFEV 177
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGV 150
+ T ++N++I G + G +L+ +M + D+ ++ +L ++
Sbjct: 178 MAERDTVSWNSMIGGLVKVGELGEARRLFDEMP----ERDTVSWNTILDGYVKAGEMNAA 233
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
L K N V S + ++ Y GD+ A++LFD+M KN+V WT MI+G+ ++
Sbjct: 234 FELFEKMPARNVV--SWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGL 291
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
++ I+L+ +M ++G++ ++ T++S+LSACA G LGK VH + + + + A
Sbjct: 292 AKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNA 351
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMYAKCG +E AL +F ++ K+V +WN+II GLA+HG GE+A+++F +M+ G PD
Sbjct: 352 LIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPD 411
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
VT + VL AC+HAG +++G F+ M RDY V P V+HYGC+VDLL R L EA+ ++
Sbjct: 412 KVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLV 471
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+MP+EPNA++WG+LL AC + LAE +RL+K E + GN ++SNIYAA
Sbjct: 472 HSMPLEPNAIIWGTLLGACRMH---SATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAG 528
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
WD+ +R MK +I K G S IE++D VHEF V D HP S+ IY ++
Sbjct: 529 DWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTID 581
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 188/384 (48%), Gaps = 29/384 (7%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
L +C+ L Q KQ+HAQ++KA+ + KLI + Q+ A VFNQI +P
Sbjct: 24 LHRCSSLNQVKQIHAQVLKANLHRESFVGQ---KLIAAFSLCRQMTLAVNVFNQIQDPDV 80
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSL 153
+NT+IR + ++ +M +G+ D+FTYP LLKAC +R V+ +H+
Sbjct: 81 LLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQ 140
Query: 154 VVKSK---DF---NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
V K D NS+I S F C V +A+ +F+ M E++ V+W +MI G VK
Sbjct: 141 VEKMGFCLDIFVPNSLIDSY-----FKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVK 195
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
E LF +M + L + A A EL + +N +
Sbjct: 196 VGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFEL---FEKMPARNVVSW---- 248
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
+ + Y+K G ++ A +F + KN+ W +I G A G ++A+ ++ QM+ +G+
Sbjct: 249 -STMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGL 307
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD-YKVEPNVKHYGCLVDLLCRARLLDEA 386
K DD T+I++L+AC+ +GL+ GK + ++ R +K V + L+D+ + L+ A
Sbjct: 308 KFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSN--ALIDMYAKCGSLENA 365
Query: 387 YEVIRNMPMEPNAVLWGSLLTACA 410
+ M + + V W +++ A
Sbjct: 366 LSIFHGM-VRKDVVSWNAIIQGLA 388
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 266/430 (61%), Gaps = 10/430 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI V + A VF+++ + + ++ T+I Y+ A L + ++ M+ G+ P+
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
FTY +L+AC L ++ +H ++K +S + + LI Y +G++++A +FD+M
Sbjct: 66 MFTYSSVLRACDGLFNLRQLHCCIIKIG-LDSDVFVRSALIDVYSRWGELENALRVFDEM 124
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
++V W+++I G + + E + LF++M+ +G + TL SVL AC L ELG+
Sbjct: 125 VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGR 184
Query: 251 WVHEFVNK--NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
VH V K +ILN+ AL DMY KCG +E+A VF ++EK+V +W+++I GLA
Sbjct: 185 QVHVHVLKYDQDLILNN----ALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQ 240
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
+G +EA+K+F M++ GIKP+ VT++ VL ACSHAGL+E+G F++M+ + ++P +
Sbjct: 241 NGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGRE 300
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HYGC++DLL RA L EA ++I M EP+AV W +LL AC NV++A A +++
Sbjct: 301 HYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVH---RNVDVAIHAAKQI 357
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
++L+P + G YVL+SNIYA +W+D ++RR M R I K PGCS IE++ +H F++G
Sbjct: 358 LRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILG 417
Query: 489 DGRHPCSEEI 498
D HP EI
Sbjct: 418 DRSHPQIREI 427
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 137/279 (49%), Gaps = 11/279 (3%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
+L+ C L +Q+H IIK D+ + LI+ ++ A VF++++
Sbjct: 72 VLRACDGLFNLRQLHCCIIKIGLDSDVFVRS---ALIDVYSRWGELENALRVFDEMVTGD 128
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHS 152
++++I G+A+ G ++L+ +M G T +L+AC L + + VH
Sbjct: 129 LVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHV 188
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
V+K D + ++++ L+ YC G ++ A +F +M EK+V++W+ MI G + +
Sbjct: 189 HVLKY-DQDLILNN--ALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSK 245
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG-KWVHEFVNKNCIILNDKLGAAL 271
E + LF M+ G++ N +T+V VL AC++ G E G + H I + +
Sbjct: 246 EALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCM 305
Query: 272 TDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGGLAIH 309
D+ + G + EA+ + ++ E + TW +++ +H
Sbjct: 306 IDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVH 344
>gi|296084064|emb|CBI24452.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/493 (35%), Positives = 281/493 (56%), Gaps = 19/493 (3%)
Query: 30 SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVN--SSQIAYAHLV 87
S+ + LLQ+C K +HAQII F+ AKL+ S I A V
Sbjct: 7 SYDYTYLLQRCKGTKTIKSIHAQIIIGGFEENPFLG---AKLVGKYAQCYESNIEDARKV 63
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DL 144
F+ + + F +NT+I+GYA G + +Y M +G+ + +T+P +LKACG D
Sbjct: 64 FDCLPDRDVFVWNTIIQGYANLGPFMEALNIYEYMRCSGVAANRYTFPFVLKACGAMKDG 123
Query: 145 RQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
++ + +H VVK D + + + L+ FY ++ +++ +FD ++EK++VTW +MI+
Sbjct: 124 KKGQAIHGHVVKHGLDLDLFVGN--ALVAFYAKCNEIGASRRVFDMISEKDIVTWNSMIS 181
Query: 204 GHVKQKNYREGIDLFRKM----RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
G+ + + LF M D+ + TLV++L ACA A + G W+H +V K+
Sbjct: 182 GYAINGCADDALVLFHNMLQVQGDTVYAPDSATLVAILPACAQAAAIQEGLWIHSYVIKS 241
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
I L+ LG+ L MYA CG + A VF + +KN+ WN+II +HG +EA+KMF
Sbjct: 242 GIELDAALGSGLIAMYANCGLLNSARDVFDRIDDKNIVVWNAIIRCYGMHGHADEALKMF 301
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
+ SG+ PD V + +L+A SHAG++ +G E+F M DY VE + +HY +VD+L R
Sbjct: 302 SGLIDSGLHPDGVIFLCLLSAFSHAGMVAEGMELFEKM-GDYGVEKSSEHYASVVDILGR 360
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
A L EA E ++NMP++P ++G+LL AC + N+ELAE E+L L+P N G Y
Sbjct: 361 AGFLHEAVEFVKNMPVQPGKDVYGALLGACRIHN---NIELAEEIAEKLFVLDPDNAGRY 417
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
+++ +Y +W++A ++R+ +KE+NI K GCS IE+ V+H F V D HP ++I+
Sbjct: 418 IILVKMYEDAGKWENAARLRKALKEKNIRKPLGCSAIELGCVLHTFGVEDKSHPFKDQIF 477
Query: 500 SMLEYVAISLREE 512
LE + + EE
Sbjct: 478 DTLERLDNIMEEE 490
>gi|147852347|emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
Length = 505
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/500 (34%), Positives = 272/500 (54%), Gaps = 12/500 (2%)
Query: 13 HFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLI 72
HF S+ N N + L LL C+ + Q+ A R + + L L
Sbjct: 11 HFCPPKPSNGNLNLVSTKQQCLSLLNLCSSMKHLFQIRGHGFIAGPLLRFCASSPLGNL- 69
Query: 73 ESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSF 132
+A ++ + ++N +IR YA I Y +M G+ PD
Sbjct: 70 ---------NHARVLLSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKL 120
Query: 133 TYPILLKACGDLRQVKGVHSLVVK--SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
T+PILLKAC + + V + ++ +I FY + ++ A+ +FD+M
Sbjct: 121 TFPILLKACAXISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEM 180
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
+ + VV+W A+++ V + + LF KMR SG + +E T+V +LSAC+ LG G+
Sbjct: 181 SYRTVVSWNAVLSACVDNEWLNDSFGLFVKMRGSGFDPDETTMVILLSACSELGNLSFGR 240
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
WVH V + +++N +LG AL DMYAKCG + EA VF +LE+NV TW+++I GLA HG
Sbjct: 241 WVHSQVIEKGMVVNCRLGTALVDMYAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHG 300
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
+EA+++F +M+ S I P+ VT + VL ACSHAGL++ G F++M + +EP + HY
Sbjct: 301 FAKEALELFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHY 360
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
G +VD+L RA L EAY I NMP+E + V+W +LL+AC N + + +RL++
Sbjct: 361 GAMVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGINDNDGVGDKVRKRLLE 420
Query: 431 LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
LEP GN+V+++N+YA +WD A +RR MK+ + K G S IE+ +H F GD
Sbjct: 421 LEPRRSGNFVMVANMYAEVGKWDKAANVRRTMKDTGLKKMAGESCIEVGGSIHRFFSGDD 480
Query: 491 RHPCSEEIYSMLEYVAISLR 510
E++ +L+ + + ++
Sbjct: 481 PQLDCEDVLQLLDGLNLHMK 500
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/479 (36%), Positives = 280/479 (58%), Gaps = 22/479 (4%)
Query: 48 QVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+VH I+ DN + D LA KLI + + YA VF++ + + +N + R
Sbjct: 98 RVHRHIL----DNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRAL 153
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-------GDLRQVKGVHSLVVKSKD 159
AG G + LY +M G++ D FTY +LKAC L + K +H+ + + +
Sbjct: 154 TLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTR-RG 212
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
+NS ++ +T L+ Y FG V A +F+ M +NVV+W+AMI + K E + FR
Sbjct: 213 YNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFR 272
Query: 220 KM----RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
+M +DS N +T+VSVL ACA+L A E G+ +H ++ + + + +AL MY
Sbjct: 273 EMMTETKDS--SPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMY 330
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
+CG ++ RVF + +++V +WNS+I +HG G +A+++F +M +G P VT +
Sbjct: 331 GRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFV 390
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
+VL ACSH GL+E+GK +F +M RD+ ++P V+HY C+VDLL RA LDEA +++++M
Sbjct: 391 SVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRT 450
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
EP +WGSLL +C NVELAE A RL LEP N GNYVL+++IYA WD+
Sbjct: 451 EPGPKVWGSLLGSCRIH---GNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEV 507
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
++++L++ R + K PG +E+ ++ F+ D +P E+I++ L +A ++E+ Y
Sbjct: 508 KRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGY 566
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 144/281 (51%), Gaps = 13/281 (4%)
Query: 39 KCT--HLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
+CT HL + K++HA + + +++ + L++ + YA VFN + +
Sbjct: 192 ECTADHLTKGKEIHAHLTRRGYNSHVYI---MTTLVDMYARFGCVDYASYVFNGMPVRNV 248
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD--PDSFTYPILLKACGD---LRQVKGVH 151
+++ +I YA+ G ++ + +M+ D P+S T +L+AC L Q + +H
Sbjct: 249 VSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIH 308
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
+++ + +S++ ++ L+T Y G + Q +FD+M +++VV+W ++I+ +
Sbjct: 309 GYILR-RGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 367
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN-CIILNDKLGAA 270
R+ I +F +M +G +T VSVL AC++ G E GK + E + ++ I + A
Sbjct: 368 RKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYAC 427
Query: 271 LTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHG 310
+ D+ + ++EA ++ + + E W S++G IHG
Sbjct: 428 MVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 162/372 (43%), Gaps = 64/372 (17%)
Query: 57 SFDNRTISDTQLAK-----LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGL 111
+ +N +IS AK LI+SL ++ A V +Q +PS + +I
Sbjct: 33 ALNNLSISSGAGAKISNNQLIQSLCKEGKLKQALRVLSQESSPSQQTYELLI-----LCC 87
Query: 112 GHR-----GIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHS 166
GHR G++++ ++ NG D D F
Sbjct: 88 GHRSSLSDGLRVHRHILDNGSDQDPFL--------------------------------- 114
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
T+LI Y + G V A+ +FD+ ++ + W A+ + E + L+ KM GV
Sbjct: 115 ATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGV 174
Query: 227 EVNELTLVSVLSACANLGASEL-------GKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
E + T VL AC ASE GK +H + + + + L DMYA+ G
Sbjct: 175 ESDRFTYTYVLKACV---ASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFG 231
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM--QMSGIKPDDVTLIAV 337
++ A VF + +NV +W+++I A +G EA++ F +M + P+ VT+++V
Sbjct: 232 CVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSV 291
Query: 338 LTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPME 396
L AC+ +E+G+ I Y +RR ++ + LV + R LD V M +
Sbjct: 292 LQACASLAALEQGRLIHGYILRRG--LDSILPVISALVTMYGRCGKLDVGQRVFDRM-HD 348
Query: 397 PNAVLWGSLLTA 408
+ V W SL+++
Sbjct: 349 RDVVSWNSLISS 360
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
+I K+ ++ + + + + EL ++ C + + G VH + N
Sbjct: 52 LIQSLCKEGKLKQALRVLSQESSPSQQTYELLIL----CCGHRSSLSDGLRVHRHILDNG 107
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ L L MY+ G ++ A +VF ++ + WN++ L + G GEE + ++W
Sbjct: 108 SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYW 167
Query: 321 QMQMSGIKPDDVTLIAVLTAC----SHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLVD 375
+M G++ D T VL AC A + KGKEI ++ RR Y +V LVD
Sbjct: 168 KMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYN--SHVYIMTTLVD 225
Query: 376 LLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
+ R +D A V MP+ N V W +++ AC + + A
Sbjct: 226 MYARFGCVDYASYVFNGMPVR-NVVSWSAMI-ACYAKNGKA 264
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 185/560 (33%), Positives = 281/560 (50%), Gaps = 79/560 (14%)
Query: 26 TATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK--------------- 70
T H + L+ ++Q Q+HAQII + + ++ TQL
Sbjct: 77 TTPTEAHFISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVF 136
Query: 71 -------------LIESLVNSSQ----IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
LI L +S I + L+ I P + V++ A
Sbjct: 137 NHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTE 196
Query: 114 RGIQLYTQMIGNGLDPDSFT------------------------------------YPIL 137
G+ ++ ++ G++ DSF + +L
Sbjct: 197 LGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVL 256
Query: 138 LKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
+K C G +++ + + K ++ S + LI + GD+ A LFDQM EKN
Sbjct: 257 IKGCCKAGSMKKAVKLFKAMPKKENV-----SWSTLIDGFAKNGDMDRAMELFDQMPEKN 311
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
VV+WT M++G + + + + +F KM + GV N T+VS LSACA +G E G +H+
Sbjct: 312 VVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHK 371
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
++ N + L + LG AL DMYAKCG IE A VF +K++ TW +I G AIHG E+
Sbjct: 372 YIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQ 431
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+ F QM +GIKPD+V +A+LTAC H+G ++ G F +MR DY +EP++KHY +V
Sbjct: 432 AIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIV 491
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
D+L R+ L EA I MPM P+ V+WG+L AC + ++A+ A+ +L+KLEP
Sbjct: 492 DMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHK---KTKMAKFALNKLLKLEPT 548
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+ GNY+ +SN YAA QW+DA ++R LM+ R + KN G S IE+ VH F+ GD H
Sbjct: 549 HTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKD 608
Query: 495 SEEIYSMLEYVAISLREECY 514
S+ I LE + ++ Y
Sbjct: 609 SKAICLKLEEIMAGAVKQGY 628
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 279/487 (57%), Gaps = 10/487 (2%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
H L LL++ + Q A ++K+ + T+L + + +
Sbjct: 43 QHCLHLLERSSAPAAVLQSLAFLLKSGLHANPLVLTRLFASSAAAAPALLEPLVAALLVP 102
Query: 91 IINPSTFAFNTVIRGYAEAGLGH---RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV 147
+ F NT+IR +A + L R + M+ + P+ FT+P LLKAC V
Sbjct: 103 SVPIDAFLANTLIRAHAASPLPSARLRAASFFPLMLRSATLPNKFTFPFLLKACAAFPGV 162
Query: 148 KGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGD--VKSAQLLFDQMTEKNVVTWTAMING 204
GV + K F + + LI Y FG + A+ +FD+M + + VTW+AMI G
Sbjct: 163 -GVQAHAAALKFGFTTDQYVSNTLIHMYSCFGGEFLGDARNVFDRMAKSSAVTWSAMIGG 221
Query: 205 HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
+V+ + + LFR+M+ SGV +E+T++ VL+A A+LGA EL +WV FV K I +
Sbjct: 222 YVRSGLSSDAVGLFREMQASGVRPDEVTMIGVLAAAADLGALELARWVGRFVEKEGIGKS 281
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
L AL D AKCG ++ A+ VF+ + E+ + +W S+I LA+ G G+EAV +F +M+
Sbjct: 282 VTLCNALIDALAKCGDLDGAMAVFQGMKERTIVSWTSVIDALAMEGRGKEAVAVFEEMKT 341
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
+G++PDDV I VLTACSHAG++++G F +MR Y ++P ++HYGC+VD+ RA +++
Sbjct: 342 AGVRPDDVAFIGVLTACSHAGMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMVE 401
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSN 444
A E + MPM+PN ++W +L+ AC + +EL E L+ P ++ NYV++SN
Sbjct: 402 RAMEFVHKMPMKPNPIIWRTLVAACRAH---GRLELGETITRNLLNEYPAHEANYVMLSN 458
Query: 445 IYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEY 504
+YA +W + ++RR M +R I K PGCS++E++ VHEF+ GD HP +EIY M+E
Sbjct: 459 VYALTRRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEE 518
Query: 505 VAISLRE 511
+A LR
Sbjct: 519 MARELRR 525
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 262/440 (59%), Gaps = 12/440 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A LVF ++++ ++N +I + + G + + L+ M+ +G++PD FTY +LKAC
Sbjct: 367 ACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAG 426
Query: 144 LRQVK---GVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
+ + +H+ ++KS+ +S + LI Y G ++ A+ L D++ E+ VV+W
Sbjct: 427 WQALNCGMEIHNRIIKSRMGLDSFVG--IALIDMYSKCGMMEKAEKLHDRLAEQTVVSWN 484
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
A+I+G QK E F KM + GV+ + T ++L CANL ELGK +H + K
Sbjct: 485 AIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK 544
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ + + + L DMY+KCG +++ +F+ ++ TWN+++ G A HG GEEA+K+F
Sbjct: 545 ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIF 604
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
MQ+ +KP+ T +AVL AC H GL+EKG F++M +Y ++P ++HY C+VD++ R
Sbjct: 605 EYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGR 664
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
+ + +A E+I MP E +AV+W +LL+ C NVE+AE A +++LEP + Y
Sbjct: 665 SGQVSKALELIEGMPFEADAVIWRTLLSXCKIH---GNVEVAEKAAYSILQLEPEDSAAY 721
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
VL+SNIYA W++ K+R++M+ + K PGCS IEI VH F+VGD HP S+EIY
Sbjct: 722 VLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIY 781
Query: 500 SMLEYVAISLREECYAARMP 519
L+ + ++ + MP
Sbjct: 782 ENLDVLTDEMK---WVGYMP 798
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 186/380 (48%), Gaps = 12/380 (3%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
Q+H +K F + T + N S + + +FN + N + ++N +I GYA
Sbjct: 232 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCS--NQLFNSLPNHNLQSYNAIIVGYA 289
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC----GDLRQVKGVHSLVVKSKDFNSV 163
+ G + ++ + +GL D + +AC GDL ++ VH L +KS S
Sbjct: 290 RSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQ-VHGLSMKSL-CQSN 347
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
I ++ Y G + A L+F++M ++ V+W A+I H + N + + LF M
Sbjct: 348 ICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQ 407
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
SG+E +E T SVL ACA A G +H + K+ + L+ +G AL DMY+KCG +E+
Sbjct: 408 SGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEK 467
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A ++ + E+ V +WN+II G ++ EEA K F +M G+ PD+ T +L C++
Sbjct: 468 AEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCAN 527
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
+E GK+I + + +++ + LVD+ + + + + P + V W
Sbjct: 528 LVTVELGKQIHAQIIKK-ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP-NRDFVTWN 585
Query: 404 SLLTACASADDGANVELAEI 423
+++ C A G E +I
Sbjct: 586 AMV--CGYAQHGLGEEALKI 603
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 200/469 (42%), Gaps = 91/469 (19%)
Query: 19 NSHKNSNTATKSHHHLPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKLIESL 75
+S++ + T K+ H+ Q+C+ L KQ HA++I F T+ T LI+
Sbjct: 33 SSYQATPTKKKTFSHI--FQECSDRKALCPGKQAHARMILTEF-KPTVFVTNC--LIQMY 87
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI--QLYTQMIGNGLDP---- 129
+ S + +A VF+ + T ++N ++ GY AG G G+ +L+ M G G
Sbjct: 88 IKCSDLGFAFKVFDGMPQRDTVSWNAMLFGY--AGRGDIGVAQKLFDAMPGTGCGVVELF 145
Query: 130 -----------DSFTYPILLKACGDLRQVKG---VHSLVVK------------------- 156
D T+ ++LK+C L G +H L VK
Sbjct: 146 DFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAK 205
Query: 157 ---------------------------------SKDFNS--VIHSLTRLITFYCNFGDVK 181
DF + VI + T + CN
Sbjct: 206 CCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDC 265
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
S Q LF+ + N+ ++ A+I G+ + E + +FR ++ SG+ ++E++L ACA
Sbjct: 266 SNQ-LFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACA 324
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
+ G VH K+ N + A+ DMY KCG + EA VF+ ++ ++ +WN+
Sbjct: 325 VIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNA 384
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
II +G E+ + +F M SG++PD+ T +VL AC+ + G EI R
Sbjct: 385 IIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIH---NRII 441
Query: 362 KVEPNVKHYG--CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
K + + L+D+ + ++++A E + + E V W ++++
Sbjct: 442 KSRMGLDSFVGIALIDMYSKCGMMEKA-EKLHDRLAEQTVVSWNAIISG 489
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 10/175 (5%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L C +LV KQ+HAQIIK + + L + N L+F +
Sbjct: 521 ILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDF---QLIFEKAP 577
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-KGVH 151
N +N ++ GYA+ GLG ++++ M + P+ T+ +L+ACG + V KG+H
Sbjct: 578 NRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLH 637
Query: 152 SL--VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMIN 203
++ + + + + ++ G V A L + M E + V W +++
Sbjct: 638 YFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 692
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/413 (38%), Positives = 251/413 (60%), Gaps = 9/413 (2%)
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK- 148
Q I P +N ++ G+ + G G ++ + +M G+DP++ T L ACG +R +K
Sbjct: 458 QGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKL 517
Query: 149 --GVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
+H V+++ + ++ + S LI+ Y ++ A +F +++ ++VV W ++I+
Sbjct: 518 GKEIHGYVLRNHIELSTGVGS--ALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISAC 575
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ +DL R+M S VEVN +T+VS L AC+ L A GK +H+F+ + + +
Sbjct: 576 AQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCN 635
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
+ +L DMY +CG I+++ R+F ++ ++++ +WN +I +HG G +AV +F +
Sbjct: 636 FILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTM 695
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G+KP+ +T +L+ACSH+GLIE+G + F M+ +Y ++P V+ Y C+VDLL RA +E
Sbjct: 696 GLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNE 755
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
E I MP EPNA +WGSLL AC N +LAE A L +LEP + GNYVLM+NI
Sbjct: 756 TLEFIEKMPFEPNAAVWGSLLGACRIH---CNPDLAEYAARYLFELEPQSSGNYVLMANI 812
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
Y+A +W+DA K+R LMKER + K PGCS IE+ +H F+VGD HP E+I
Sbjct: 813 YSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQI 865
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 163/322 (50%), Gaps = 15/322 (4%)
Query: 103 IRGYAEAGLGHR-GIQLYTQMIGNGLD---PDSFT--YPILLKACGDLRQVK---GVHS- 152
I G++ G HR G+ M+ + +D PD Y +L+ C L ++ VH+
Sbjct: 55 ITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQ 114
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
LVV D + S RL+ YC G V+ A+ +FD+M+E+NV +WTA++ + +Y
Sbjct: 115 LVVNGVDVCEFLGS--RLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYE 172
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E I LF M + GV + V AC+ L +GK V++++ N + ++
Sbjct: 173 ETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSIL 232
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
DM+ KCG ++ A R F+ + K+V WN ++ G G ++A+K M++SG+KPD V
Sbjct: 233 DMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQV 292
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
T A+++ + +G E+ + F M +PNV + L+ + EA V R
Sbjct: 293 TWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRK 352
Query: 393 MPME---PNAVLWGSLLTACAS 411
M +E PN++ S ++AC +
Sbjct: 353 MVLEGVKPNSITIASAVSACTN 374
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 191/436 (43%), Gaps = 86/436 (19%)
Query: 61 RTISDTQLA----------KLIESLVNSSQIAYAHLVFNQI-----INPSTFAFNTVIRG 105
+ ISD +L+ +I S Q A F ++ P+ ++ +I G
Sbjct: 277 KCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG 336
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVVKSKDFNS 162
+ G + ++ +M+ G+ P+S T + AC +L R + +H +K ++ +S
Sbjct: 337 SEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDS 396
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL----- 217
+ L+ +Y V+ A+ F + + ++V+W AM+ G+ + ++ E I+L
Sbjct: 397 DLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMK 456
Query: 218 ------------------------------FRKMRDSGVEVNELTLVSVLSACANLGASE 247
F++M G++ N T+ L+AC + +
Sbjct: 457 FQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLK 516
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
LGK +H +V +N I L+ +G+AL MY+ C +E A VF + ++V WNSII A
Sbjct: 517 LGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACA 576
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR------DY 361
G A+ + +M +S ++ + VT+++ L ACS + +GKEI + R ++
Sbjct: 577 QSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNF 636
Query: 362 KVEPNVKHYG-C--------LVDLLCRARLLD------------------EAYEVIRNMP 394
+ + YG C + DL+ + L+ ++ R M
Sbjct: 637 ILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMG 696
Query: 395 MEPNAVLWGSLLTACA 410
++PN + + +LL+AC+
Sbjct: 697 LKPNHITFTNLLSACS 712
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 156/347 (44%), Gaps = 47/347 (13%)
Query: 31 HHHLP-LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL 86
H P + + C+ L + K V+ ++ F+ + +++ + ++ A
Sbjct: 190 HFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVK---GSILDMFIKCGRMDIARR 246
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
F +I F +N ++ GY G + ++ + M +G+ PD T+
Sbjct: 247 FFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW------------ 294
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-----EKNVVTWTAM 201
+I+ Y G + A F +M + NVV+WTA+
Sbjct: 295 ---------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTAL 333
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
I G + E + +FRKM GV+ N +T+ S +SAC NL G+ +H + K
Sbjct: 334 IAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEE 393
Query: 262 ILNDKL-GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ +D L G +L D YAKC +E A R F ++ + ++ +WN+++ G A+ G EEA+++
Sbjct: 394 LDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLS 453
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
+M+ GI+PD +T ++T + G + E F M ++PN
Sbjct: 454 EMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM-HSMGMDPNT 499
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 202/466 (43%), Gaps = 93/466 (19%)
Query: 33 HLPLLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
+ +LQKC L + QVHAQ++ D + + ++L+E + + A +F+
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVD---VCEFLGSRLLEVYCQTGCVEDARRMFD 148
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQ 146
++ + F++ ++ Y G I+L+ M+ G+ PD F +P + KAC +L R
Sbjct: 149 KMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRV 208
Query: 147 VKGVHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
K V+ ++ + NS + ++ + G + A+ F+++ K+V W M++G+
Sbjct: 209 GKDVYDYMLSIGFEGNSCVKG--SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGY 266
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ +++ + M+ SGV+ +++T +++S
Sbjct: 267 TSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-------------------------- 300
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIV-----LEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
YA+ G EEA + F + + NV +W ++I G +G EA+ +F
Sbjct: 301 ---------YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFR 351
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI---------------FYNMRRDY---- 361
+M + G+KP+ +T+ + ++AC++ L+ G+EI N DY
Sbjct: 352 KMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKC 411
Query: 362 -KVEPNVKHYGCL--VDLLCRARLL---------DEAYEVIRNMP---MEPNAVLWGSLL 406
VE + +G + DL+ +L +EA E++ M +EP+ + W L+
Sbjct: 412 RSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLV 471
Query: 407 TACASADDGANVELAEIAMERLIKLEPFN-DGNYVLMSNIYAAKAQ 451
T DG + A+E ++ D N +S AA Q
Sbjct: 472 TGFTQYGDG------KAALEFFQRMHSMGMDPNTTTISGALAACGQ 511
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 4/223 (1%)
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
S+L C L LG VH + N + + + LG+ L ++Y + G +E+A R+F + E+
Sbjct: 94 SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 153
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
NV +W +I+ G EE +K+F+ M G++PD V ACS GK++
Sbjct: 154 NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV- 212
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
Y+ E N G ++D+ + +D A + + + +W +++ S +
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSGYTSKGE 271
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
L I+ +L ++P ++S YA Q+++A K
Sbjct: 272 FKKA-LKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEEASK 312
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP K L Q K++H II+ D + L LI+ I + +F+ +
Sbjct: 607 LPACSKLAALRQGKEIHQFIIRCGLDT---CNFILNSLIDMYGRCGSIQKSRRIFDLMPQ 663
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
++N +I Y G G + L+ GL P+ T+ LL AC
Sbjct: 664 RDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSAC 711
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/470 (38%), Positives = 266/470 (56%), Gaps = 12/470 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS--TFAFNTVIRG 105
Q H QI K T LI S + A VF + + T +N ++ G
Sbjct: 61 QFHGQITKVGCVFEPFVQT---GLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSG 117
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNS 162
Y + L+ QM G+ +S T L+ AC +L +H +K F+S
Sbjct: 118 YVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKY-GFDS 176
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ + IT Y G V AQ LFD+M K +++W AM++G+ + ++L+R M
Sbjct: 177 DVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMD 236
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+GV + +TLV VLS+CANLGA +G V + + N L AL +MYA+CG +
Sbjct: 237 MNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLT 296
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+A VF + E+ + +W +IIGG +HG GE AV++F +M SGI+PD + VL+ACS
Sbjct: 297 KAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACS 356
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
HAGL ++G E F M+R+Y++EP +HY C+VDLL RA L EA +I +MP++P+ +W
Sbjct: 357 HAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVW 416
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL AC NVELAE+A ER+I+LEP N G YVL+SNIY+ ++R +M
Sbjct: 417 GALLGACKIHK---NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMM 473
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
KE+ + K+PGCS +E+ VH F+VGD H S+EIY +LE + + +E
Sbjct: 474 KEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQE 523
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 189/395 (47%), Gaps = 29/395 (7%)
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVH 151
+N + +NT +R A+ + + LY QM+ +G P++FT+P LK+C L
Sbjct: 1 MNALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAAL------- 53
Query: 152 SLVVKSKDFNSVIHSL---------TRLITFYCNFGDVKSAQLLFDQ--MTEKNVVTWTA 200
SL + F+ I + T LI+ YC V +A+ +F++ + K V + A
Sbjct: 54 SLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNA 113
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
+++G+V + + LFR+M + GV VN +TL+ ++ AC + ELG +H K
Sbjct: 114 LVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYG 173
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ + MY KCG + A ++F + K + +WN+++ G A +G ++++
Sbjct: 174 FDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYR 233
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR-RDYKVEPNVKHYGCLVDLLCR 379
M M+G+ PD VTL+ VL++C++ G G E+ + M+ + P + + L+++ R
Sbjct: 234 NMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNN--ALINMYAR 291
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK--LEPFNDG 437
L +A V MP E V W +++ G E+A + +I+ +EP DG
Sbjct: 292 CGNLTKAQAVFDGMP-ERTLVSWTAIIGGYGMHGHG---EIAVQLFKEMIRSGIEP--DG 345
Query: 438 NYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
+ + A D G M +RN PG
Sbjct: 346 TAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPG 380
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 290/507 (57%), Gaps = 34/507 (6%)
Query: 8 NSQLTHFTNSANS-HKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDT 66
N +F S NS H+N ++ + P++ + L ++ + + Q+ +A+
Sbjct: 28 NPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLWTSSLARYCR-NGQLSEAA--------A 78
Query: 67 QLAKLIESLVNSSQIAYAHLVFNQIINPS-TFAFNTVIRGYA-EAGLGHRGIQLYTQMIG 124
+ ++ + V + I + L+ PS +F F + + GYA + GL + + T +I
Sbjct: 79 EFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALID 138
Query: 125 NGLDPDSFTYPILLKACGDLRQVKGV-HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSA 183
+ C L + V ++L VK NSV S ++ + G+++ A
Sbjct: 139 ------------MYSKCAQLGHARKVFYNLGVK----NSV--SWNTMLNGFMRNGEIELA 180
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
LFD+M ++ ++WTA+ING +K + ++ F +M+ SGV + +++++VL+ACA+L
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
GA LG WVH FV N K+ +L DMY++CG IE A +VF + ++ + +WNSII
Sbjct: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
G A++G +E+++ F MQ G KPD V+ LTACSHAGL+ KG E+F NM+ +K+
Sbjct: 301 VGFAVNGFADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
P ++HYGC+VDL RA L++A +I MPM+PN V+ GSLL AC + D V LAE
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGD---VNLAER 417
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVH 483
M+ L KL+P D YVL+SNIYAA +WD A +RR MK R + K PG S +EI+ VH
Sbjct: 418 LMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVH 477
Query: 484 EFMVGDGRHPCSEEIYSMLEYVAISLR 510
EF+ GD H ++ IYSML+ + L+
Sbjct: 478 EFVAGDNYHADADNIYSMLDLLCHELK 504
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/438 (38%), Positives = 265/438 (60%), Gaps = 15/438 (3%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-- 141
A F+ + S ++N ++ GYA+ GL ++L+ +M+ G++PD T+ ++ AC
Sbjct: 213 ARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSS 272
Query: 142 -GD-LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
GD V +L K N + T L+ Y FGD+ SA+ LF+ M +NVVTW
Sbjct: 273 RGDPCLAASLVRTLHQKRIQLNCFVR--TALLDMYAKFGDLDSARKLFNTMPGRNVVTWN 330
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSG-VEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
+MI G+ + I+LF++M + + +E+T+VSV+SAC +LGA ELG WV F+ +
Sbjct: 331 SMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTE 390
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
N I L+ A+ MY++CG +E+A RVF+ + ++V ++N++I G A HG G EA+ +
Sbjct: 391 NQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINL 450
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
M+ GI+PD VT I VLTACSHAGL+E+G+++F +++ +P + HY C+VDLL
Sbjct: 451 MSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLG 505
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGN 438
R L++A + MPMEP+A ++GSLL A + VEL E+A +L +LEP N GN
Sbjct: 506 RVGELEDAKRTMERMPMEPHAGVYGSLLNA---SRIHKQVELGELAANKLFELEPDNSGN 562
Query: 439 YVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
++L+SNIYA+ +W D ++R MK+ + K G S +E +H+F+V D H S++I
Sbjct: 563 FILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDI 622
Query: 499 YSMLEYVAISLREECYAA 516
Y +L + +RE Y A
Sbjct: 623 YQLLIELRKKMREAGYIA 640
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 212/436 (48%), Gaps = 72/436 (16%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVN-SSQIAYAHLVFNQIINPSTFAFNTVI 103
+Q+HAQII S + + +A LI + Y HL+FN +NP+ F F +++
Sbjct: 16 HLRQLHAQIIHNSLHHH---NYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSML 72
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVK----SKD 159
R Y+ + + +Y QM G G+ PD+F YPIL+K+ G G H+ V+K S
Sbjct: 73 RFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGT--GGIGFHAHVLKLGHGSDA 130
Query: 160 F--NSVIHSLTRL--------------------------ITFYCNFGDVKSAQLLFDQMT 191
F N+VI RL ++ Y + AQ LFD M
Sbjct: 131 FVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMP 190
Query: 192 EKNVVTWTAMINGHVKQKNYR-------------------------------EGIDLFRK 220
E+NV+TWTAM+ G+ K K+ E + LF +
Sbjct: 191 ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDE 250
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M ++G+E +E T V+V+SAC++ G L + +++ I LN + AL DMYAK G
Sbjct: 251 MVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGD 310
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIKPDDVTLIAVLT 339
++ A ++F + +NV TWNS+I G A +G A+++F +M + PD+VT+++V++
Sbjct: 311 LDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVIS 370
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
AC H G +E G + + + +++ ++ + ++ + R +++A V + M +
Sbjct: 371 ACGHLGALELGNWVVRFLTEN-QIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR-DV 428
Query: 400 VLWGSLLTACASADDG 415
V + +L++ A+ G
Sbjct: 429 VSYNTLISGFAAHGHG 444
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 132/331 (39%), Gaps = 37/331 (11%)
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN 176
QL+ Q+I N L ++ +L+ C LR L+ S N + T ++ FY +
Sbjct: 19 QLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNST-LNPNVFVFTSMLRFYSH 77
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
D L+++QM V A + + + GI + G + +V
Sbjct: 78 LQDHAKVVLMYEQMQGCGVRP-DAFVYPILIKSAGTGGIGFHAHVLKLGHGSDAFVRNAV 136
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
+ A LG + V + + + D A+ Y K +A +F ++ E+NV
Sbjct: 137 IDMYARLGPIGHARKVFDEIPDYERKVAD--WNAMVSGYWKWESEGQAQWLFDVMPERNV 194
Query: 297 CT-------------------------------WNSIIGGLAIHGCGEEAVKMFWQMQMS 325
T WN+++ G A +G EEA+++F +M +
Sbjct: 195 ITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNA 254
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
GI+PD+ T + V++ACS G + + + +++ N L+D+ + LD
Sbjct: 255 GIEPDETTWVTVISACSSRGDPCLAASLVRTLHQK-RIQLNCFVRTALLDMYAKFGDLDS 313
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
A ++ MP N V W S++ A A
Sbjct: 314 ARKLFNTMPGR-NVVTWNSMIAGYAQNGQSA 343
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/519 (33%), Positives = 287/519 (55%), Gaps = 19/519 (3%)
Query: 9 SQLTHFTNSANSHKNSNTATKSHHHLP---LLQKCT---HLVQFKQVHAQIIKASFDNRT 62
S+ HF ++ + N A S LL+ C+ HL + VHAQ+ + FD
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIINP--STFAFNTVIRGYAEAGLGHRGIQLYT 120
L L ++ A VF + P + ++ ++ YA+ G +++++
Sbjct: 155 FVQNGLIAL---YAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFS 211
Query: 121 QMIGNGLDPDSFTYPILLKA---CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNF 177
M + PD +L A DL+Q + +H+ VVK L L T Y
Sbjct: 212 HMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK-MGLEIEPDLLISLNTMYAKC 270
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
G V +A++LFD+M N++ W AMI+G+ K RE ID+F +M + V + +++ S +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
SACA +G+ E + ++E+V ++ + + +AL DM+AKCG +E A VF L+++V
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
W+++I G +HG EA+ ++ M+ G+ P+DVT + +L AC+H+G++ +G F+N+
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG-WWFFNL 449
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
D+K+ P +HY C++DLL RA LD+AYEVI+ MP++P +WG+LL+AC +
Sbjct: 450 MADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH---RH 506
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
VEL E A ++L ++P N G+YV +SN+YAA WD ++R MKE+ + K+ GCS +E
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 478 INDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
+ + F VGD HP EEI +E++ L+E + A
Sbjct: 567 VRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVA 605
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 207/401 (51%), Gaps = 21/401 (5%)
Query: 14 FTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE 73
+TNS H +S A+ L+ TH Q KQ+HA+++ S + KLI
Sbjct: 13 YTNSG-IHSDSFYAS-------LIDSATHKAQLKQIHARLLVLGLQ---FSGFLITKLIH 61
Query: 74 SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFT 133
+ + I +A VF+ + P F +N +IRGY+ + +Y+ M + PDSFT
Sbjct: 62 ASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFT 121
Query: 134 YPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD-- 188
+P LLKAC L + + VH+ V + F++ + LI Y + SA+ +F+
Sbjct: 122 FPHLLKACSGLSHLQMGRFVHAQVFR-LGFDADVFVQNGLIALYAKCRRLGSARTVFEGL 180
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
+ E+ +V+WTA+++ + + E +++F MR V+ + + LVSVL+A L +
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G+ +H V K + + L +L MYAKCG + A +F + N+ WN++I G A
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNV 367
+G EA+ MF +M ++PD +++ + ++AC+ G +E+ + ++ Y R DY+ + +
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
L+D+ + ++ A ++ + ++ + V+W +++
Sbjct: 361 S--SALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVG 398
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/482 (36%), Positives = 270/482 (56%), Gaps = 50/482 (10%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP- 129
L+ V + + A +F+QI ++NT+I GYA+ G + +L+ + P
Sbjct: 194 LMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEE------SPV 247
Query: 130 -DSFTYPILLKAC---GDLRQVKGVHSLVVKSKD--FNSVIHSLTR-------------- 169
D FT+ ++ A G L + + V + + ++ +N +I +
Sbjct: 248 RDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEM 307
Query: 170 ----------LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
+I+ YC GD+ A+ LFD M +++ V+W A+I G+ + Y E +++
Sbjct: 308 PFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLV 367
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV-----NKNCIILNDKLGAALTDM 274
+M+ G +N T LSACA++ A ELGK VH V K C++ G AL M
Sbjct: 368 EMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLV-----GNALVGM 422
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y KCG I+EA VF+ V K++ +WN+++ G A HG G +A+ +F M +G+KPD++T+
Sbjct: 423 YCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITM 482
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+ VL+ACSH GL ++G E F++M +DY + PN KHY C++DLL RA L+EA +IRNMP
Sbjct: 483 VGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMP 542
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
EP+A WG+LL A + N+EL E A E + K+EP N G YVL+SN+YAA +W D
Sbjct: 543 FEPDAATWGALLGA---SRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVD 599
Query: 455 AGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
KMR M++ + K PG S +E+ + +H F VGD HP IY+ LE + + ++ E Y
Sbjct: 600 VSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGY 659
Query: 515 AA 516
+
Sbjct: 660 VS 661
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 124/257 (48%), Gaps = 31/257 (12%)
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ S ++T Y ++ A++LFD M EK+VV+W AM++G+V+ + E D+F +M
Sbjct: 95 LFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPH 154
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVH------EFVNKNCIILNDKLGAALTDMYAK 277
N ++ +L+A G E + + E ++ NC++ Y K
Sbjct: 155 K----NSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGG----------YVK 200
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
+ +A ++F + +++ +WN++I G A G +A ++F + S ++ D T A+
Sbjct: 201 RNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLF---EESPVR-DVFTWTAM 256
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
+ A G++++ + +F M + ++ NV ++ + + +D E+ MP P
Sbjct: 257 VYAYVQDGMLDEARRVFDEMPQKREMSYNV-----MIAGYAQYKRMDMGRELFEEMPF-P 310
Query: 398 NAVLWGSLLTA-CASAD 413
N W +++ C + D
Sbjct: 311 NIGSWNIMISGYCQNGD 327
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 287/539 (53%), Gaps = 75/539 (13%)
Query: 3 KQLVPNSQLTHFTNSANSHKNSNTATKSHH-------HLPLLQKCTHLVQFKQVHAQIIK 55
K +P+S+ H T + + HK + ++H L LL+KC + Q KQ+ +Q++
Sbjct: 17 KPSLPSSRHIH-TRALSPHKENPINWNTNHSFVLSNPFLSLLEKCKSISQLKQIQSQMVL 75
Query: 56 ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRG 115
+ ++L ++ + Y + NP+TF++N IRG+ ++
Sbjct: 76 TGLIEDGFASSRLIAFC-AISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREA 134
Query: 116 IQLYTQMIG-NGLDPDSFTYPILLKA---------------------------------- 140
+ LY +++ +G PD++TYP+L KA
Sbjct: 135 VVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIH 194
Query: 141 ----CGDLRQVKGVH--SLVVKSKDFNSVIH----------------------SLTRLIT 172
CGDL + + S V +NS+I+ S T ++
Sbjct: 195 LLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYCGNLESARKLFDSMTNKTMVSWTTMVV 254
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
Y G + A LFD+M +K+VV W AMI G+V +E + LF +M+ + +E+T
Sbjct: 255 GYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVT 314
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
+VS LSAC+ LGA ++G W+H ++ K+ + LN LG AL DMYAKCG I +A++VF+ +
Sbjct: 315 MVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELP 374
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
+N TW +II GLA+HG A+ F +M + + PD+VT + +L+AC H GL+E+G++
Sbjct: 375 GRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRK 434
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
F M + + P +KHY C+VDLL RA LL+EA E+I++MP+E +AV+WG+L AC
Sbjct: 435 YFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIH 494
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
NV + E A +L++++P + G YVL++N+Y W +AGK R+LM++R + K P
Sbjct: 495 ---GNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTP 550
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/476 (35%), Positives = 272/476 (57%), Gaps = 14/476 (2%)
Query: 44 VQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ-IAYAHLVFNQIINPSTFAFNTV 102
+Q QVH IK+ FD D + I L + + A+LVF ++ + ++N +
Sbjct: 355 LQGLQVHCLAIKSGFD----VDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAI 410
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHSLVVKSK- 158
I + I +M+ G++PD FTY +LKAC L+ ++ VH +KS
Sbjct: 411 IAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGL 470
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
++ + S ++ YC G + AQ L D++ + +V+W ++I+G K E F
Sbjct: 471 GLDAFVSS--TVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFF 528
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
+M D GV+ + T +VL CANL ELGK +H + K ++ ++ + + L DMYAKC
Sbjct: 529 SEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKC 588
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G + ++L +F+ + + +WN++I G A+HG G EA++MF +MQ + + P+ T +AVL
Sbjct: 589 GNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVL 648
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
ACSH GL++ G FY M YK+EP ++H+ C+VD+L R++ EA + IR+MP+E +
Sbjct: 649 RACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEAD 708
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
AV+W +LL+ C D VE+AE A +++L+P + Y+L+SN+YA +W D +
Sbjct: 709 AVIWKTLLSICKIRQD---VEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRT 765
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
RRLM++ + K PGCS IE+ +H F+ GD HP S E+Y ML + + ++ Y
Sbjct: 766 RRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSGY 821
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 172/344 (50%), Gaps = 16/344 (4%)
Query: 77 NSSQIAYAHL--------VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD 128
N+ AYAH +F + +P ++N ++ GY + G+ + L +M G+
Sbjct: 74 NTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVA 133
Query: 129 PDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL 185
PD T +LLKACG L + +H++ VK+ + + + L+ Y ++ A
Sbjct: 134 PDRTTLAVLLKACGGLEDLALGVQIHAVAVKT-GLEMDVRAGSALVDMYGKCRSLEDALR 192
Query: 186 LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA 245
F M E+N V+W A I G V+ + Y G++LF +M+ G+ V++ SV +CA +
Sbjct: 193 FFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITC 252
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
+ +H KN + +G A+ D+YAK + +A R F + V N+++ G
Sbjct: 253 LSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVG 312
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVE 364
L G G EA+++F M SGI D V+L V +AC+ +G ++ ++ + V+
Sbjct: 313 LVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVD 372
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
V++ ++DL + + L EAY V + M + ++V W +++ A
Sbjct: 373 VCVRN--AILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAA 413
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 11/284 (3%)
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLI 171
G + +M+ +G P +F LL+ CG +GV V+ +D S ++
Sbjct: 23 GQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD-VMPHRD----TVSWNTML 77
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
T Y + GD +A LF M + +VV+W A+++G+ ++ +R+ + L +M GV +
Sbjct: 78 TAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRT 137
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
TL +L AC L LG +H K + ++ + G+AL DMY KC +E+ALR F +
Sbjct: 138 TLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGM 197
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
E+N +W + I G + +++F QMQ G+ +V +C+ + +
Sbjct: 198 GERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTAR 257
Query: 352 EIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
++ + ++ + + V +VD+ +A L +A ++P
Sbjct: 258 QLHAHAIKNKFSADRVVGT--AIVDVYAKADSLVDARRAFFSLP 299
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 171/384 (44%), Gaps = 22/384 (5%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL+ C L Q+HA +K + + + L++ + A F+ +
Sbjct: 142 LLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGS---ALVDMYGKCRSLEDALRFFHGMG 198
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKG 149
++ ++ I G + RG++L+ QM GL Y + ++C L +
Sbjct: 199 ERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQ 258
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H+ +K+K F++ T ++ Y + A+ F + V AM+ G V+
Sbjct: 259 LHAHAIKNK-FSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTG 317
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E + LF+ M SG+ + ++L V SACA + G VH K+ ++ +
Sbjct: 318 LGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRN 377
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
A+ D+Y KC + EA VF+ + +++ +WN+II L + C E+ + +M G++P
Sbjct: 378 AILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEP 437
Query: 330 DDVTLIAVLTACS-----HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
DD T +VL AC+ G + GK I + D V V VD+ C+ ++
Sbjct: 438 DDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTV------VDMYCKCGMIT 491
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTA 408
EA ++ + + V W S+++
Sbjct: 492 EAQKLHDRIGGQ-ELVSWNSIISG 514
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/488 (35%), Positives = 275/488 (56%), Gaps = 13/488 (2%)
Query: 33 HLPLLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
++ +L+ C L K +VHA I ++ T L ++ I A +F+
Sbjct: 132 YMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYG---KCGSINEARRIFD 188
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQ 146
++N ++ +I YA++G G +L QM G P++ TY +L AC G L+
Sbjct: 189 NLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKW 248
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
VK VH + + + T L+ Y G + A+++FD+M ++VV+W MI
Sbjct: 249 VKRVHRHALDA-GLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFA 307
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ E DLF +M+ G + + + +S+L+ACA+ GA E K +H + + ++ +
Sbjct: 308 EHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVR 367
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+G AL MY+K G I++A VF + +NV +WN++I GLA HG G++A+++F +M G
Sbjct: 368 VGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHG 427
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
+KPD VT +AVL+ACSHAGL+++G+ + M + Y +EP+V H C+VDLL RA L EA
Sbjct: 428 VKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEA 487
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
I NM ++P+ WG+LL +C + NVEL E+ + +KL+P N YVL+SNIY
Sbjct: 488 KLFIDNMAVDPDEATWGALLGSCRTY---GNVELGELVAKERLKLDPKNAATYVLLSNIY 544
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
A +WD +R +M+ER I K PG S IE+++ +H+F+V D HP +EI + V
Sbjct: 545 AEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVI 604
Query: 507 ISLREECY 514
++ E Y
Sbjct: 605 EKIKAEGY 612
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 204/389 (52%), Gaps = 12/389 (3%)
Query: 28 TKSHHHLPLLQKC---THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYA 84
T S ++ +L++C L+ KQVH IIK+ + + L+ + ++ A
Sbjct: 26 TDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNA---HVMNNLLHVYIECGRLQEA 82
Query: 85 HLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL 144
VF+ ++ S ++N +I GY E ++L+ +M G+ P++ TY I+LKAC L
Sbjct: 83 RCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASL 142
Query: 145 RQVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
+K VH+ ++ S + T L+ Y G + A+ +FD + ++++WT M
Sbjct: 143 SALKWGKEVHA-CIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVM 201
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
I + + N +E L +M G + N +T VS+L+ACA+ GA + K VH +
Sbjct: 202 IGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGL 261
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
L+ ++G AL MYAK G I++A VF + ++V +WN +IG A HG G EA +F Q
Sbjct: 262 ELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQ 321
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
MQ G KPD + +++L AC+ AG +E K+I + D +E +V+ LV + ++
Sbjct: 322 MQTEGCKPDAIMFLSILNACASAGALEWVKKI-HRHALDSGLEVDVRVGTALVHMYSKSG 380
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+D+A V M + N V W ++++ A
Sbjct: 381 SIDDARVVFDRMKVR-NVVSWNAMISGLA 408
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 188/380 (49%), Gaps = 41/380 (10%)
Query: 126 GLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
GL DSF Y +LK C DL K VH ++KS+ H + L+ Y G ++
Sbjct: 23 GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSR-MEQNAHVMNNLLHVYIECGRLQE 81
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A+ +FD + +K+ +W AMI G+V+ K+ + + LFR+M GV+ N T + +L ACA+
Sbjct: 82 ARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACAS 141
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
L A + GK VH + + + ++G AL MY KCG I EA R+F ++ ++ +W +
Sbjct: 142 LSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVM 201
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
IG A G G+EA ++ QM+ G KP+ +T +++L AC+ G ++ K + + D
Sbjct: 202 IGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRV-HRHALDAG 260
Query: 363 VEPNVKHYGCLVDLLCRARLLD-------------------------------EAYEVIR 391
+E +V+ LV + ++ +D EAY++
Sbjct: 261 LELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFL 320
Query: 392 NMPME---PNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
M E P+A+++ S+L ACASA GA + +I L + + ++Y+
Sbjct: 321 QMQTEGCKPDAIMFLSILNACASA--GALEWVKKIHRHALDSGLEVDVRVGTALVHMYSK 378
Query: 449 KAQWDDAGKMRRLMKERNIV 468
DDA + MK RN+V
Sbjct: 379 SGSIDDARVVFDRMKVRNVV 398
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 3/224 (1%)
Query: 205 HVKQKN-YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
HV+ N E I + G+ + V VL C K VH+ + K+ +
Sbjct: 2 HVQTANTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQ 61
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
N + L +Y +CG ++EA VF +++K+ +WN++I G H E+A+++F +M
Sbjct: 62 NAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMC 121
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
G++P+ T + +L AC+ ++ GKE+ +R +E +V+ L+ + + +
Sbjct: 122 HEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHG-GLESDVRVGTALLRMYGKCGSI 180
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+EA + N+ M + + W ++ A A + +G + ME+
Sbjct: 181 NEARRIFDNL-MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQ 223
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/474 (34%), Positives = 276/474 (58%), Gaps = 10/474 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+QVH I+K+ F + + L ++ + A + + + ++N+++ G+
Sbjct: 285 EQVHGFIVKSGFGSNVYVQSAL---VDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGF 341
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC--GDLRQVKGVHSLVVKSKDFNSVI 164
GL ++L+ M G + D +T+P +L C G + K VH L++K+ N +
Sbjct: 342 VRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINP-KSVHGLIIKTGFENYKL 400
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
S L+ Y GD+ A +F++M EK+V++WT+++ G+ + ++ E + +F MR +
Sbjct: 401 VS-NALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVT 459
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
GV ++ + S+LSACA L E GK VH K+ + + + +L MYAKCG +++A
Sbjct: 460 GVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDA 519
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
+F + K+V TW +II G A +G G ++K + M SG +PD +T I +L ACSHA
Sbjct: 520 DAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHA 579
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
GL+++G++ F M + Y ++P +HY C++DL R+ LDEA +++ M ++P+A +W S
Sbjct: 580 GLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKS 639
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL+AC + N+ELAE A L +LEP N YV++SN+Y+A +W+D K+R+LMK
Sbjct: 640 LLSACRVHE---NLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKS 696
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
+ IVK PGCS +EIN V+ F+ D HP EIY+ ++ + + ++E Y M
Sbjct: 697 KGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDM 750
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 175/354 (49%), Gaps = 28/354 (7%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I S VN ++ A +F+ S+ ++++I GY + G L+ M G
Sbjct: 102 MISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKAS 161
Query: 131 SFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
FT +L+ C L ++ +H VVK+ F + +T L+ Y V A+ LF
Sbjct: 162 QFTLGSVLRVCSSLGLIQTGEMIHGFVVKN-GFEGNVFVVTGLVDMYAKCKCVSEAEFLF 220
Query: 188 D--QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA 245
+ KN V WTAM+ G+ + + + ++ FR M GVE N+ T ++L+AC+++ A
Sbjct: 221 KGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLA 280
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
G+ VH F+ K+ N + +AL DMYAKCG ++ A + + + + +V +WNS++ G
Sbjct: 281 RCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVG 340
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC---------SHAGLIEKGKEIFYN 356
HG EEA+++F M +K DD T +VL C H +I+ G E
Sbjct: 341 FVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFE---- 396
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+YK+ N LVD+ + +D AY V M +E + + W SL+T A
Sbjct: 397 ---NYKLVSNA-----LVDMYAKTGDMDCAYTVFEKM-LEKDVISWTSLVTGYA 441
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 126/246 (51%), Gaps = 4/246 (1%)
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
+S +I+ Y N G + A+ LFD + K+ +TW+++I+G+ K E DLFR MR
Sbjct: 97 YSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLE 156
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
G + ++ TL SVL C++LG + G+ +H FV KN N + L DMYAKC + EA
Sbjct: 157 GWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEA 216
Query: 285 LRVFKIVL--EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+FK + KN W +++ G A +G G +AV+ F M G++ + T +LTACS
Sbjct: 217 EFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACS 276
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
G+++ + NV LVD+ + L A ++ M + + V W
Sbjct: 277 SVLARCFGEQV-HGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETME-DDDVVSW 334
Query: 403 GSLLTA 408
SL+
Sbjct: 335 NSLMVG 340
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 33/177 (18%)
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG-------------------------- 304
L + +K G + +A ++F + +K+ +WN++I
Sbjct: 71 LLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITW 130
Query: 305 -----GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
G GC EA +F M++ G K TL +VL CS GLI+ G E+ +
Sbjct: 131 SSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTG-EMIHGFVV 189
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPME-PNAVLWGSLLTACASADDG 415
E NV LVD+ + + + EA + + + + N VLW +++T A DG
Sbjct: 190 KNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDG 246
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 153/351 (43%), Positives = 227/351 (64%), Gaps = 15/351 (4%)
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
+F D + LF Q+ + N+ W MI G V + + I+ + MR G N T
Sbjct: 58 DFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPF 117
Query: 236 VLSACANLGASELG---------KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
VL ACA L +LG +W+H+ + + ++ N +G +L DMYAKCG +E+A
Sbjct: 118 VLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARS 177
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS---GIKPDDVTLIAVLTACSH 343
VF + EK++ +W ++I G A++G +EA+ +F QMQ GIKPD T I +L C+H
Sbjct: 178 VFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTH 237
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
AGL+++G+ F +M R + + P+++HYGC+VDLL RA LLDEA+++IRNMPME NA++WG
Sbjct: 238 AGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWG 297
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL AC D +LAE+A+++LI+LEP+N GNYVL+SNIY+A +WD+A K+R M
Sbjct: 298 ALLGACRIHRD---TQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMN 354
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
E+ I K PGCS IE++ +VHEF+VGD HP SE+IY+ L+ + ++ Y
Sbjct: 355 EKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGY 405
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
S Y +F+QI P+ F +NT+IRG I+ Y M G P++FT+P +L
Sbjct: 60 SDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVL 119
Query: 139 KACG---DLRQVKGVHSLVVKSKDFNSV--------IHSLTRLITFYCNFGDVKSAQLLF 187
KAC DL+ +H+LVVK + + T L+ Y G+++ A+ +F
Sbjct: 120 KACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVF 179
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS---GVEVNELTLVSVLSACANLG 244
D M EK++V+W AMI G+ +E IDLF +M+ G++ + T + +L C + G
Sbjct: 180 DGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAG 239
Query: 245 ASELG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSI 302
+ G ++ + + + + + D+ + G ++EA ++ + + +E N W ++
Sbjct: 240 LVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGAL 299
Query: 303 IGGLAIH 309
+G IH
Sbjct: 300 LGACRIH 306
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/473 (36%), Positives = 284/473 (60%), Gaps = 57/473 (12%)
Query: 46 FKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
KQ+HAQ+IK + ++ +L + ++ + + YA +F + P+ F++NT+IR
Sbjct: 4 LKQLHAQMIKTAQIRDPLAAAELLRF-SAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRA 62
Query: 106 YAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKACGD---LRQVKGVHSLVVK----S 157
+E+ + ++ +M+ + ++P+ FT+P + KACG LR+ + VH L VK S
Sbjct: 63 LSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDS 122
Query: 158 KDFNSVIHSLTRL-------------------------------------------ITFY 174
+F V+ ++ R+ I Y
Sbjct: 123 DEF--VVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGY 180
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
G+++ A+ LFD+M +++VV+W MI G+ + +++E +++FR+M+ + V N +TLV
Sbjct: 181 VRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLV 240
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
SVL A + LGA ELGKWVH + +N I ++D LG+AL DMYAKCG IE+AL+VF+ + ++
Sbjct: 241 SVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKR 300
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
NV TW++II GLA+HG ++ + F M+ +G+ P DVT I +L+ACSHAGL+ +G+ F
Sbjct: 301 NVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFF 360
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
+M R +EP ++HYGC+VDLL RA LL+E+ E+I NMP++P+ V+W +LL AC
Sbjct: 361 DHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMH-- 418
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
NVE+ + E L++L P + G+YV +SNIYA+ W+ K+R +MKE ++
Sbjct: 419 -GNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDV 470
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 186/520 (35%), Positives = 281/520 (54%), Gaps = 19/520 (3%)
Query: 2 LKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHL---VQFKQVHAQIIKASF 58
L++L S T + S S ++ + +L+ C L V +Q+H +I+
Sbjct: 22 LRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGC 81
Query: 59 DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST----FAFNTVIRGYAEAGLGHR 114
+ L LI + A VF + NP + +N +I GY
Sbjct: 82 EAEPFV---LTALISMYCKCGLVEDARKVFEE--NPHSSQLGVCYNALISGYTANSKVSD 136
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLI 171
++ +M G+ DS T L+ C + + +H VK ++ V L I
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVA-VLNSFI 195
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
T Y G V+S + LFD+M K ++TW A+I+G+ + + ++LF +M+ SGV +
Sbjct: 196 TMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPF 255
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
TLVSVLS+CA+LGA ++G+ V E V N N L AL MYA+CG + +A VF I+
Sbjct: 256 TLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIM 315
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
K++ +W ++IG +HG GE + +F M GI+PD + VL+ACSH+GL +KG
Sbjct: 316 PVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 375
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
E+F M+R+YK+EP +HY CLVDLL RA LDEA E I +MP+EP+ +WG+LL AC
Sbjct: 376 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKI 435
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
NV++AE+A ++I+ EP N G YVLMSNIY+ + ++R +M+ER K P
Sbjct: 436 HK---NVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 492
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
G S +E VH F+ GD H +EE++ ML+ + S+ E
Sbjct: 493 GYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVME 532
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 165/317 (52%), Gaps = 8/317 (2%)
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR-QVKG--VH 151
++ ++N +R A L I LY M+ +G PD+F++P +LK+C L V G +H
Sbjct: 14 ASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLH 73
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV--VTWTAMINGHVKQK 209
V++ + LT LI+ YC G V+ A+ +F++ + V + A+I+G+
Sbjct: 74 CHVIRG-GCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANS 132
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ +FR+M+++GV V+ +T++ ++ C LG+ +H K +
Sbjct: 133 KVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLN 192
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
+ MY KCG +E R+F + K + TWN++I G + +G + +++F QM+ SG+ P
Sbjct: 193 SFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCP 252
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D TL++VL++C+H G + G+E+ + PNV L+ + R L +A V
Sbjct: 253 DPFTLVSVLSSCAHLGAKKIGQEV-GELVEANGFAPNVFLSNALISMYARCGNLAKARAV 311
Query: 390 IRNMPMEPNAVLWGSLL 406
MP++ + V W +++
Sbjct: 312 FDIMPVK-SLVSWTAMI 327
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 182/493 (36%), Positives = 292/493 (59%), Gaps = 23/493 (4%)
Query: 29 KSHHHLPLLQKCTHLV--QFKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYA 84
+S H + LL + T + Q KQ+HAQ ++ N + +++ S + + YA
Sbjct: 19 QSQHLIHLLNEPTTITMPQLKQIHAQTLRTVNSNHPNAIFLYTNILQHYSSLTQPNLTYA 78
Query: 85 HLVFNQIINPSTFAFNTVIRGYAEA---GLGHRGIQLYTQMIG---NGLDPDSFTYPILL 138
VF+ NP++F +NT+IR YA + H+ ++LY M+ PD+ T+PI+L
Sbjct: 79 TRVFHHFPNPNSFMWNTLIRVYARSTNTNHKHKAMELYKTMMTMEEKTAVPDNHTFPIVL 138
Query: 139 KACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
KAC L + K VH+ V+K F S + L+ FY G + A+ +F +M+E+N
Sbjct: 139 KACAYTFSLCEGKQVHAHVLK-HGFESDTYICNSLVHFYATCGCLDLAEKMFYKMSERNE 197
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V+W MI+ + K + + +F +M+ + + T+ SV+SACA LGA LG WVH +
Sbjct: 198 VSWNIMIDSYAKGGIFDTALRMFGEMQRVH-DPDGYTMQSVISACAGLGALSLGLWVHAY 256
Query: 256 VNKNCI--ILNDKL-GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG 312
+ K C +++D L L DMY K G +E A +VF+ + +++ WNS+I GLA+HG
Sbjct: 257 ILKKCDKNMVDDVLVNTCLVDMYCKSGELEIAKQVFESMAFRDLNAWNSMILGLAMHGEA 316
Query: 313 EEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
+ A+ + +M ++ I P+ +T + VL+AC+H G++++G F M ++Y VEP ++HYG
Sbjct: 317 KAALNYYVRMVKVEKIVPNSITFVGVLSACNHRGMVDEGIVHFDMMTKEYNVEPRLEHYG 376
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
CLVDL RA ++EA ++ M ++P+AV+W SLL AC A+VEL+E +++ +
Sbjct: 377 CLVDLFARAGRINEALNLVSEMSIKPDAVIWRSLLDACCK--QYASVELSEEMAKQVFES 434
Query: 432 EP--FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGD 489
E + G YVL+S +YA+ +W+D G +R+LM E+ + K PGCS+IEI+ VVHEF GD
Sbjct: 435 EGSVCSSGVYVLLSKVYASACRWNDVGLLRKLMSEKGVTKEPGCSIIEIDGVVHEFFAGD 494
Query: 490 GRHPCSEEIYSML 502
HP SE IY ++
Sbjct: 495 TTHPKSENIYKVV 507
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 277/500 (55%), Gaps = 18/500 (3%)
Query: 7 PNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFK---QVHAQIIKASFDNRTI 63
P L+ F N N T + +L C L K +H +KA D+
Sbjct: 411 PEEALSLFQEMQNQKMKPNRVTL----MSILPACADLSLLKLGKSIHCFTVKADMDSDLS 466
Query: 64 SDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI 123
+ T L + A FN++ + +N++I GYA+ G + I ++ ++
Sbjct: 467 TGTALVSM---YAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLR 523
Query: 124 GNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
+ ++PD+ T ++ AC DL Q +H L+VK F S H LI Y G +
Sbjct: 524 LSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVK-LGFESDCHVKNALIDMYAKCGSL 582
Query: 181 KSAQLLFDQMT-EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
SA+ LF++ K+ VTW +I +++ + +E I F +MR N +T VSVL A
Sbjct: 583 PSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPA 642
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
A L A G H + + + N +G +L DMYAKCG ++ + ++F + K+ +W
Sbjct: 643 AAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSW 702
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N+++ G A+HG G+ A+ +F MQ S ++ D V+ ++VL+AC HAGL+E+G++IF++M
Sbjct: 703 NAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSD 762
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
Y ++P+++HY C+VDLL RA L DE I+ MP+EP+A +WG+LL +C +NV+
Sbjct: 763 KYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMH---SNVK 819
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
L E+A++ L+KLEP N ++V++S+IYA +W DAGK R M + + K PGCS +E+
Sbjct: 820 LGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELK 879
Query: 480 DVVHEFMVGDGRHPCSEEIY 499
+ VH F VGD HP E ++
Sbjct: 880 NKVHAFRVGDKSHPQLESMH 899
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 185/334 (55%), Gaps = 10/334 (2%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
+S+T T H+ LL C HL Q+HAQII + F + S T L L SL + +A
Sbjct: 25 SSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHH-SITHLINLY-SLFHKCDLA 82
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC- 141
+ VF+ NPS +N++IR Y + + +++Y M+ GL+PD +T+ +LKAC
Sbjct: 83 RS--VFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACT 140
Query: 142 GDLRQVKGV--HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
G L +GV H + + + + L+ Y GD+K A+ +FD+M +++VV W
Sbjct: 141 GALNLQEGVWFHGEIDR-RGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWN 199
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
AMI G + ++ E +D FR M+ GVE + ++L+++ L EL + +H +V +
Sbjct: 200 AMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR 259
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ + L D+Y+KCG ++ A RVF +++++ +W +++ G A +GC E +++F
Sbjct: 260 --DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELF 317
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
+M++ ++ + V+ ++ A + +EKGKEI
Sbjct: 318 DKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEI 351
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 184/378 (48%), Gaps = 10/378 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
P + K +++ + +H + + R S LI+ + A VF+Q+++
Sbjct: 237 FPGICKLSNIELCRSIHGYVFR-----RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVD 291
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDPDSFTYPILLKACG--DLRQVKGV 150
++ T++ GYA G ++L+ +M +GN L A DL + K +
Sbjct: 292 QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEI 351
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H ++ + +S I T L+ Y G+ + A+ LF + +++V W+A+I V+
Sbjct: 352 HGCALQQR-IDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGY 410
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E + LF++M++ ++ N +TL+S+L ACA+L +LGK +H F K + + G A
Sbjct: 411 PEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTA 470
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L MYAKCG+ AL F + +++ TWNS+I G A G A+ MF+++++S I PD
Sbjct: 471 LVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPD 530
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
T++ V+ AC+ +++G I + + E + L+D+ + L A +
Sbjct: 531 AGTMVGVVPACALLNDLDQGTCI-HGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLF 589
Query: 391 RNMPMEPNAVLWGSLLTA 408
+ V W ++ A
Sbjct: 590 NKTDFTKDEVTWNVIIAA 607
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 145/291 (49%), Gaps = 10/291 (3%)
Query: 134 YPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
YP LL +C L + +H+ ++ S + HS+T LI Y F A+ +FD
Sbjct: 35 YPRLLSSCKHLNPLLQIHAQIIVSGFKHH--HSITHLINLYSLFHKCDLARSVFDSTPNP 92
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
+ + W +MI + + K Y E ++++ M + G+E ++ T VL AC + G W H
Sbjct: 93 SRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFH 152
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
+++ + + +GA L DMY+K G ++ A VF + +++V WN++I GL+
Sbjct: 153 GEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPC 212
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGC 372
EAV F MQ+ G++P V+L+ + IE + I Y RRD+ +
Sbjct: 213 EAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS----NG 268
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
L+DL + +D A V M ++ + V WG+++ A +G VE+ E+
Sbjct: 269 LIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMA--GYAHNGCFVEVLEL 316
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 171/415 (41%), Positives = 255/415 (61%), Gaps = 24/415 (5%)
Query: 115 GIQLYTQMIGNGLDPDSFTYPILL---KACGDLRQVKGVHSLVVKSKD---FNSVIHSLT 168
G + + Q++ GLD D F LL +CGDL + V SKD +NSV+++
Sbjct: 80 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESV-SKDLPAWNSVVNA-- 136
Query: 169 RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR-----D 223
Y G + A+ LFD+M E+NV++W+ +ING+V Y+E +DLFR+M+ +
Sbjct: 137 -----YAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNE 191
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
V N+ T+ +VLSAC LGA E GKWVH +++K + ++ LG AL DMYAKCG +E
Sbjct: 192 VFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLER 251
Query: 284 ALRVFKIV-LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTAC 341
A RVF + +K+V ++++I LA++G +E ++F +M S I P+ VT + +L AC
Sbjct: 252 AKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGAC 311
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
H GLI KGK F M ++ + P+++HYGC+VDL R+ L+ EA I +MPMEP+ ++
Sbjct: 312 VHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLI 371
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
WGSLL+ D ++ E A++RLI+L+P N G YVL+SN+YA +W + ++R
Sbjct: 372 WGSLLSGSRMLGD---IKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHE 428
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
M+ + I K PGCS +E+ VVHEF+VGD SE IY+MLE + LRE Y +
Sbjct: 429 MEVKGIKKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLEEIMQRLREAGYVS 483
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 137/320 (42%), Gaps = 47/320 (14%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP HL ++ HAQI+ D T L + S ++ A +F++ ++
Sbjct: 68 LPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSS---CGDLSSALRIFDESVS 124
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQM----------IGNG----------------- 126
A+N+V+ YA+AGL + +L+ +M + NG
Sbjct: 125 KDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM 184
Query: 127 ---------LDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFY 174
+ P+ FT +L ACG L Q K VHS + K ++ T LI Y
Sbjct: 185 QLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLG-TALIDMY 243
Query: 175 CNFGDVKSAQLLFDQM-TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS-GVEVNELT 232
G ++ A+ +FD + ++K+V ++AMI E +F +M S + N +T
Sbjct: 244 AKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVT 303
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNC-IILNDKLGAALTDMYAKCGYIEEALR-VFKI 290
V +L AC + G GK + + + I + + + D+Y + G I+EA + +
Sbjct: 304 FVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASM 363
Query: 291 VLEKNVCTWNSIIGGLAIHG 310
+E +V W S++ G + G
Sbjct: 364 PMEPDVLIWGSLLSGSRMLG 383
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 277/473 (58%), Gaps = 14/473 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K++H ++A FD+ T L ++ + A L+F+ ++ + ++N++I Y
Sbjct: 256 KEIHGYAMRAGFDSLVNIATAL---VDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAY 312
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSK-DFN- 161
+ + ++ +M+ G+ P + L AC GDL + + +H L V+ + D N
Sbjct: 313 VQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNV 372
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
SV++SL I+ YC +V +A +F ++ + +V+W AMI G + E ++ F +M
Sbjct: 373 SVVNSL---ISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQM 429
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
+ V+ + T VSV++A A L + KW+H V +NC+ N + AL DMYAKCG I
Sbjct: 430 QARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAI 489
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
A +F ++ E++V TWN++I G HG G+ A+++F +MQ I+P+ VT ++V++AC
Sbjct: 490 MIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISAC 549
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SH+GL+E G + F+ M+ +Y +EP++ HYG +VDLL RA L+EA++ I MP++P +
Sbjct: 550 SHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 609
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
+G++L AC NV AE ERL +L P + G +VL++NIY A + W+ G++R
Sbjct: 610 YGAMLGACQIHK---NVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVS 666
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
M + + K PGCS++EI + VH F G HP S++IY+ LE + ++E Y
Sbjct: 667 MLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGY 719
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 204/385 (52%), Gaps = 20/385 (5%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K++H ++K+ F + T L + Q+ A VF+++ ++NT++ GY
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENM---YAKCRQVHEARKVFDRMPERDLVSWNTIVAGY 211
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSV 163
++ G+ +++ M L P T +L A LR + K +H +++ F+S+
Sbjct: 212 SQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRA-GFDSL 270
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
++ T L+ Y G +K+A+LLFD M E+NVV+W +MI+ +V+ +N +E + +F+KM D
Sbjct: 271 VNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLD 330
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEF-----VNKNCIILNDKLGAALTDMYAKC 278
GV+ +++++ L ACA+LG E G+++H+ +++N ++N +L MY KC
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVN-----SLISMYCKC 385
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
++ A +F + + + +WN++I G A +G EA+ F QMQ +KPD T ++V+
Sbjct: 386 KEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVI 445
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
TA + + K I + R+ ++ NV LVD+ + + A +I +M E +
Sbjct: 446 TAIAELSITHHAKWIHGVVMRNC-LDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERH 503
Query: 399 AVLWGSLLTACASADDG-ANVELAE 422
W +++ + G A +EL E
Sbjct: 504 VTTWNAMIDGYGTHGIGKAALELFE 528
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 203/396 (51%), Gaps = 15/396 (3%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKN----SNTATKSHHHLP---LLQKCTHLVQFKQVHAQI 53
M QLV S ++ ++SH++ N + + P LL++C+ L + + + I
Sbjct: 1 MSSQLVHVSTVSQIPPISSSHRHFLSQRNYIPANVYEHPAALLLERCSSLKELRHILPLI 60
Query: 54 IKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
K + T+L L + A VF I + T+++G+A+
Sbjct: 61 FKNGLYQEHLFQTKLVSL---FCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLD 117
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRL 170
+ ++ + +M + ++P + + LLK CGD LR K +H L+VKS F+ + ++T L
Sbjct: 118 KALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS-GFSLDLFAMTGL 176
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNE 230
Y V A+ +FD+M E+++V+W ++ G+ + R +++ M + ++ +
Sbjct: 177 ENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSF 236
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI 290
+T+VSVL A + L +GK +H + + + AL DMYAKCG ++ A +F
Sbjct: 237 ITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDG 296
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+LE+NV +WNS+I + +EA+ +F +M G+KP DV+++ L AC+ G +E+G
Sbjct: 297 MLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
+ I + + + +++ NV L+ + C+ + +D A
Sbjct: 357 RFI-HKLSVELELDRNVSVVNSLISMYCKCKEVDTA 391
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 145/287 (50%), Gaps = 7/287 (2%)
Query: 125 NGLDPDSFTYP--ILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
N + + + +P +LL+ C L++++ + L+ K+ + + T+L++ +C +G V
Sbjct: 29 NYIPANVYEHPAALLLERCSSLKELRHILPLIFKNGLYQEHLFQ-TKLVSLFCRYGSVDE 87
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A +F+ + +K V + M+ G K + + + F +MRD VE +L C +
Sbjct: 88 AARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGD 147
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
+GK +H + K+ L+ L +MYAKC + EA +VF + E+++ +WN+I
Sbjct: 148 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTI 207
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDY 361
+ G + +G A++M M +KP +T+++VL A S LI GKEI Y MR +
Sbjct: 208 VAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGF 267
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
N+ LVD+ + L A + M +E N V W S++ A
Sbjct: 268 DSLVNIA--TALVDMYAKCGSLKTARLLFDGM-LERNVVSWNSMIDA 311
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 184/512 (35%), Positives = 287/512 (56%), Gaps = 79/512 (15%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLI--ESLVNSSQIAYAHLVFNQIIN 93
L + CT + KQ+HA +I F++ T + L +LI S+ S +AYAH +F I
Sbjct: 19 LWRSCTTIGTLKQIHASMIVKGFNSNT---SALRELIYASSIAISGTMAYAHQLFPHITE 75
Query: 94 PSTFAFNTVIRG-------------YAEAGLG----------------------HRGIQL 118
P TF +NT+IRG Y++ G G +
Sbjct: 76 PDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGV 135
Query: 119 YTQMIGNGLDPDSFTYPILL---KACGDLRQVKGVHS----------------------L 153
+ ++ G + ++F L+ CGDL + + L
Sbjct: 136 HGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGEL 195
Query: 154 VVKSKDFNSV----IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
V + F+ + + S +IT Y G+++SA+ LFD++ +++VVTW AMI G+V
Sbjct: 196 GVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCG 255
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH----EFVNKNCIILND 265
+ ++ +++F +MR G +E+T++S+LSAC +LG + G+ +H E ++ +L
Sbjct: 256 SNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVL-- 313
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
LG AL DMYAKCG I AL VF+ + EK+V TWNS++GGLA HG E+++ +F +M+
Sbjct: 314 -LGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKL 372
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
I+PD++T + VL ACSHAG +E+G++ F MR +Y +EPN++HYGC+VDLL RA LL+E
Sbjct: 373 KIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNE 432
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
A++ I M +EPNA++W +LL AC NVEL A +L+K+ G+YVL+SNI
Sbjct: 433 AFDFIDTMKIEPNAIVWRTLLGACRIH---GNVELGRRANMQLLKMRHDESGDYVLLSNI 489
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
YA++ +WD K+R+LM + + K GCS+IE
Sbjct: 490 YASRGEWDGVEKVRKLMDDSGVRKEAGCSLIE 521
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 105/273 (38%), Gaps = 51/273 (18%)
Query: 34 LPLLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
L LL CT L +++H I + F R +S LI+ I A VF
Sbjct: 280 LSLLSACTDLGDLDAGQRIHCCISEMGF--RDLSVLLGNALIDMYAKCGSIVRALEVFQG 337
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGV 150
+ +N+V+ G A G + I L+T+M + PD T+ +L AC
Sbjct: 338 MREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACS-------- 389
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM-----TEKNVVTWTAMINGH 205
+ G V+ + FD M E N+ + M++
Sbjct: 390 -------------------------HAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLL 424
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ E D M+ +E N + ++L AC G ELG+ + + K + +D
Sbjct: 425 GRAGLLNEAFDFIDTMK---IEPNAIVWRTLLGACRIHGNVELGRRANMQLLK---MRHD 478
Query: 266 KLG--AALTDMYAKCGYIEEALRVFKIVLEKNV 296
+ G L+++YA G + +V K++ + V
Sbjct: 479 ESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGV 511
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 161/411 (39%), Positives = 249/411 (60%), Gaps = 19/411 (4%)
Query: 113 HRGIQLYTQMIGNGLDPDSFTYPILL---KACGDLRQVKGVHSLVVKS--KDFNSVIHSL 167
HRG QL+ Q++ GL D F L+ +CG + + + +N++IH+
Sbjct: 77 HRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHAN 136
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD---S 224
+ G + A+ LFDQM EKNV++W+ MI+G+V Y+ + LFR ++ S
Sbjct: 137 AKA-------GMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGS 189
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
+ NE T+ SVLSACA LGA + GKWVH +++K + ++ LG +L DMYAKCG IE A
Sbjct: 190 QLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERA 249
Query: 285 LRVF-KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
+F + EK+V W+++I ++HG EE +++F +M G++P+ VT +AVL AC H
Sbjct: 250 KCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVH 309
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
GL+ +G E F M +Y V P ++HYGC+VDL RA +++A+ V+++MPMEP+ ++WG
Sbjct: 310 GGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWG 369
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL A +VE EIA+ +L++L+P N YVL+SN+YA +W + +R LM+
Sbjct: 370 ALLNG---ARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLME 426
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
R I K PGCS++E++ V+ EF GD HP +Y ML+ + L + Y
Sbjct: 427 VRGIKKLPGCSLVEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGY 477
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 145/320 (45%), Gaps = 45/320 (14%)
Query: 32 HHLP-LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
H P LLQ + +Q+HAQI+ N T L + S + +A F++
Sbjct: 64 HTFPFLLQSINTPHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPT---FARQAFDE 120
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI--------------------------- 123
I P ++N +I A+AG+ H +L+ QM
Sbjct: 121 ITQPDLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLF 180
Query: 124 -------GNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
G+ L P+ FT +L AC G L+ K VH+ + K+ V+ T LI
Sbjct: 181 RSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLG-TSLIDM 239
Query: 174 YCNFGDVKSAQLLFDQM-TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
Y G ++ A+ +FD + EK+V+ W+AMI E ++LF +M + GV N +T
Sbjct: 240 YAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVT 299
Query: 233 LVSVLSACANLG-ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-I 290
V+VL AC + G SE ++ +N+ + + + D+Y++ G IE+A V K +
Sbjct: 300 FVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSM 359
Query: 291 VLEKNVCTWNSIIGGLAIHG 310
+E +V W +++ G IHG
Sbjct: 360 PMEPDVMIWGALLNGARIHG 379
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 178/489 (36%), Positives = 284/489 (58%), Gaps = 13/489 (2%)
Query: 22 KNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDT-QLAKLIESLVNSSQ 80
++S T ++ L + T + V AQ+ S +SDT L LI + S
Sbjct: 84 RHSGYVTLDNYSLNIAFSATSRLPSVSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSY 143
Query: 81 IAYAHLVFNQIINPS--TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
A A V + + T ++NT+I GY G+ ++ +Q + QM+ + D T L
Sbjct: 144 PATARQVLDSAPQGACDTVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNAL 203
Query: 139 KACGDLRQVKG---VHSLVV-KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
A +VK HSLVV N + S LI+ Y G V+ A+ +F M E+N
Sbjct: 204 VASAKAGKVKVGRLCHSLVVVNGAGINCYMGS--SLISMYAKCGLVEDARKVFHGMHERN 261
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
VV WT+MI+G+ + ++E ++LFR M+ +G++V++ T+ +V+S+CA +GA +LG++VH
Sbjct: 262 VVCWTSMISGYTQLGKFKEAVNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHA 321
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+ + + + + +L DMY+KCG I +A +F + +++V +W ++I G ++G E
Sbjct: 322 YCDVHGLGKELSVKNSLIDMYSKCGDINKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSE 381
Query: 315 AVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
A+ +F QM+ G + P++VT + VLT+CSH GL+E+G F M YK+ P ++HYGC+
Sbjct: 382 ALDLFAQMEGEGKVMPNEVTFLGVLTSCSHGGLVEQGFHYFQRMSMVYKLAPRIEHYGCM 441
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
VDLL RA+LL EA + I+NMP+ P+ V+W SLL AC + + V LAE ER+++LEP
Sbjct: 442 VDLLGRAKLLTEAEQFIKNMPIAPDVVVWRSLLFACRACGE---VGLAEFVAERILELEP 498
Query: 434 FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHP 493
+VL+SN+YA ++W D ++R M + K PGCS IE++ VHEF GD H
Sbjct: 499 KKCAGHVLLSNVYATTSRWVDVNELRTSMDNSRMSKQPGCSFIEVDGCVHEFFAGDESHL 558
Query: 494 CSEEIYSML 502
+E IY++L
Sbjct: 559 ETEAIYNIL 567
>gi|125540774|gb|EAY87169.1| hypothetical protein OsI_08570 [Oryza sativa Indica Group]
Length = 613
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 173/486 (35%), Positives = 274/486 (56%), Gaps = 15/486 (3%)
Query: 40 CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVN-SSQIAYAHLVFNQIINPSTFA 98
C L + ++ HA+ +K D L + +AYA +F + +P F
Sbjct: 41 CASLDEARKAHARHVKLGLDRSPRHARPLLAACALAADWPGSMAYAASIFAALDDPEAFD 100
Query: 99 FNTVIRGY-AEAGLGHR----GIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGV 150
+NT++RGY A G G R ++L+ M+ +G++PDS+T+P + KAC G L++ + +
Sbjct: 101 YNTLMRGYVAGGGGGGRDPAAALRLFVDMVDDGVEPDSYTFPFVFKACAQLGALQEGRQL 160
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT--EKNVVTWTAMINGHVKQ 208
+VK F HS LI+FY G+ A+ F+QM E+ +W+A++ + +
Sbjct: 161 QGHLVK-LGFQRDEHSQNSLISFYGKCGEADLARRAFEQMEDDEQTTASWSALLAAYTRA 219
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ E ++ F M +G +E ++VS LSACA+LGA ++G+ +H + +N LN +
Sbjct: 220 GRWAECVESFGAMVRAGWRPDESSMVSALSACAHLGAHDVGRSIHCALLRNTARLNTFMS 279
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+L DMYAKCG IE A VF + +KN T+++++ GLA+HG G +A+++F M G +
Sbjct: 280 TSLVDMYAKCGCIENAAAVFDAMDDKNAWTYSAMVSGLALHGDGRKALEVFDAMVREGHR 339
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD + VL ACS AGL+E+G F MR ++K+ PN +HYGC+VDL+ RA LD+A
Sbjct: 340 PDAAVYVGVLNACSRAGLLEEGLRCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLDDARA 399
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
+I NMP P W SLL AC N+ELAE A++ L +L N G+Y+++S+++A
Sbjct: 400 LIGNMPTGPTDTAWRSLLNACRIH---GNLELAERALQELERLGATNAGDYIILSDMHAR 456
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
D A R +R + + PG S +E++ H F+ D HP +++IY ML +
Sbjct: 457 AHNRDAAAARRTEAVDRGLAQAPGYSAVEVHGATHRFVSQDRSHPRADDIYEMLHQMEWQ 516
Query: 509 LREECY 514
LR E Y
Sbjct: 517 LRFEGY 522
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 175/479 (36%), Positives = 279/479 (58%), Gaps = 22/479 (4%)
Query: 48 QVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+VH I+ DN + D LA KLI + + YA VF++ + + +N + R
Sbjct: 98 RVHRHIL----DNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRAL 153
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-------GDLRQVKGVHSLVVKSKD 159
AG G + LY +M G++ D FTY +LKAC L + K +H+ + + +
Sbjct: 154 TLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTR-RG 212
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
++S ++ +T L+ Y FG V A +F M +NVV+W+AMI + K E + FR
Sbjct: 213 YSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFR 272
Query: 220 KM----RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
+M +DS N +T+VSVL ACA+L A E GK +H ++ + + + +AL MY
Sbjct: 273 EMMRETKDS--SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMY 330
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
+CG +E RVF + +++V +WNS+I +HG G++A+++F +M +G P VT +
Sbjct: 331 GRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFV 390
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
+VL ACSH GL+E+GK +F M RD+ ++P ++HY C+VDLL RA LDEA +++++M
Sbjct: 391 SVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRT 450
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
EP +WGSLL +C NVELAE A RL LEP N GNYVL+++IYA WD+
Sbjct: 451 EPGPKVWGSLLGSCRIH---GNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEV 507
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
++++L++ R + K PG +E+ ++ F+ D +P E+I++ L +A ++E+ Y
Sbjct: 508 KRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGY 566
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 144/281 (51%), Gaps = 13/281 (4%)
Query: 39 KCT--HLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
+CT HL++ K++HA + + + + + L++ + YA VF + +
Sbjct: 192 ECTVNHLMKGKEIHAHLTRRGYSSHVYI---MTTLVDMYARFGCVDYASYVFGGMPVRNV 248
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD--PDSFTYPILLKACGD---LRQVKGVH 151
+++ +I YA+ G ++ + +M+ D P+S T +L+AC L Q K +H
Sbjct: 249 VSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIH 308
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
+++ + +S++ ++ L+T Y G ++ Q +FD+M +++VV+W ++I+ +
Sbjct: 309 GYILR-RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 367
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN-CIILNDKLGAA 270
++ I +F +M +G +T VSVL AC++ G E GK + E + ++ I + A
Sbjct: 368 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 427
Query: 271 LTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHG 310
+ D+ + ++EA ++ + + E W S++G IHG
Sbjct: 428 MVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 182/510 (35%), Positives = 262/510 (51%), Gaps = 75/510 (14%)
Query: 32 HHLPLLQKCTHLV---QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF 88
HH L Q T L Q HA +I + + + T+L ++S + +A +F
Sbjct: 10 HHPSLSQALTALTATSHLHQAHAHLIVSGLASHPFTVTRLLACAALSPSASDLPHAKTIF 69
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC------- 141
NPS F FNT+I + + Y M+ G PD+FT+P L+K+
Sbjct: 70 LHTHNPSPFMFNTIIMASSRT---LDSVTFYVCMLHAGHFPDNFTFPFLIKSSSASPTSL 126
Query: 142 ------------GDLRQVKGVHSLVVKSKDFNSV---------------IHSLTRLITFY 174
G R V V++++ F + + S T LIT +
Sbjct: 127 LGHQLHAHVVKFGLDRDVFVVNNMIALYSSFRELRSARKVFDESYSLVDVVSWTTLITGF 186
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD----------S 224
N G + A+ +FD M KN V+W AMI+G+ E LF +M D S
Sbjct: 187 SNSGQIDEARKIFDLMPLKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVS 246
Query: 225 GVE----------------------VNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
G NE LVS +SACA L A E G+W+H ++ + +
Sbjct: 247 GYSQLGMCNEALDLFMEMVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKLR 306
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
+N LG L DMY KCG I +A VF ++ E+NV +WNS+I GLA++GCG+EA+ +FW+M
Sbjct: 307 INVTLGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKEALALFWKM 366
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
Q G P+ +T IA+LT CSH+GLI +G+ +F M + Y ++P +KHYGC+VDLL RA L
Sbjct: 367 QFVGPSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGL 426
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLM 442
+ EA + + MPM+P++ LWG+L+ AC VEL E +RLI LEP + G Y L+
Sbjct: 427 VKEALDFVEKMPMKPHSELWGALVGACRIH---GQVELGEELGKRLIDLEPHHGGRYALL 483
Query: 443 SNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
NI+AA +WDD +R L K R ++KNPG
Sbjct: 484 CNIFAAAQRWDDVAMVRDLEKGRKVLKNPG 513
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 268/473 (56%), Gaps = 11/473 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+ VH +KA F D L++ + A +VF ++ S ++ ++I GY
Sbjct: 316 RAVHCFGVKACFSR---EDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGY 372
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSV 163
A GL ++L+ +M G+ PD +T +L C L + K VH + K D
Sbjct: 373 AREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWI-KENDMGFD 431
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR- 222
I L+ Y G ++ A+L+F +M K++++W +I G+ K E + LF +
Sbjct: 432 IFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLV 491
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ +E T+ VL ACA+L A + G+ +H ++ +N + + +L DMYAKCG +
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 551
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A +F + K++ +W +I G +HG G+EA+ +F QM+ +GI+PD+++ +++L ACS
Sbjct: 552 LARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACS 611
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
H+GL+++G F MR + K+EP V+HY C+VD+L R L +AY I NMP+ P+A +W
Sbjct: 612 HSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIW 671
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL C D V+LAE E++ +LEP N G YVLM+NIYA +W++ ++R+ +
Sbjct: 672 GALLCGCRIHHD---VKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRI 728
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
+R + KNPGCS IEI V+ F+ GD +P +E+I + L V + EE Y+
Sbjct: 729 GQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYS 781
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 187/360 (51%), Gaps = 17/360 (4%)
Query: 7 PNSQLTHFTNSANS-------HKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFD 59
N+QL F S N H + +LQ C K ++
Sbjct: 64 ANTQLRRFCESGNLKNAVKLLHVSGKWDIDPRTLCSVLQLCADSKSLKD-GKEVDNFIRG 122
Query: 60 NRTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQL 118
N + D+ L +KL N + A VF+Q+ +N ++ A++G I L
Sbjct: 123 NGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 119 YTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHSLVVKSK--DFNSVIHSLTRLITF 173
+ +M+ +G++ DS+T+ + K+ LR V G +H ++KS + NSV +SL + F
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSL---VAF 239
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y V SA+ +FD+MTE++V++W ++ING+V +G+ +F +M SG+E++ T+
Sbjct: 240 YLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATI 299
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
VSV + CA+ LG+ VH F K C D+ L DMY+KCG ++ A VF+ +
Sbjct: 300 VSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSG 359
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
++V ++ S+I G A G EAVK+F +M+ GI PD T+ AVL C+ L+++GK +
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRV 419
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
+++ TL SVL CA+ + + GK V F+ N +L+ LG+ L MY CG ++EA R
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASR 150
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF V + WN ++ LA G ++ +F +M SG++ D T V + S
Sbjct: 151 VFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 347 IEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
+ G+++ Y ++ + +V + LV + +D A +V M E + + W S+
Sbjct: 211 VNGGEQLHGYILKSGFGERNSVGN--SLVAFYLKNHRVDSARKVFDEMT-ERDVISWNSI 267
Query: 406 LTACAS 411
+ S
Sbjct: 268 INGYVS 273
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 174/439 (39%), Positives = 263/439 (59%), Gaps = 24/439 (5%)
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL---KACGDLR 145
N ++P F ++ + G + + Q++ GLD D F LL +CGDLR
Sbjct: 55 NHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLR 114
Query: 146 QVKGVHSLVVKSKD---FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
+ V SKD +NSV+++ Y G + A+ LFD+M E+NV++W+ +I
Sbjct: 115 SAQRVFD-DSGSKDLPAWNSVVNA-------YAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 203 NGHVKQKNYREGIDLFRKMR-----DSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
NG+V Y+E +DLFR+M+ ++ V NE T+ +VLSAC LGA E GKWVH +++
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSIIGGLAIHGCGEEAV 316
K + ++ LG AL DMYAKCG +E A RVF + +K+V ++++I LA++G +E
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF 286
Query: 317 KMFWQMQMS-GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
++F +M S I P+ VT + +L AC H GLI +GK F M ++ + P+++HYGC+VD
Sbjct: 287 QLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVD 346
Query: 376 LLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN 435
L R+ L+ EA I +MPMEP+ ++WGSLL+ D ++ E A++RLI+L+P N
Sbjct: 347 LYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGD---IKTCEGALKRLIELDPMN 403
Query: 436 DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
G YVL+SN+YA +W + +R M+ + I K PGCS +E+ VVHEF+VGD S
Sbjct: 404 SGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQES 463
Query: 496 EEIYSMLEYVAISLREECY 514
E IY+ML+ + LRE Y
Sbjct: 464 ERIYAMLDEIMQRLREAGY 482
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 158/406 (38%), Positives = 246/406 (60%), Gaps = 10/406 (2%)
Query: 117 QLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
QL++ ++ G D L++A CG + + V S D + S +I
Sbjct: 96 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASAD----VVSWNVMIDG 151
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y GD+ A+ LFD M +NVV+WT +I + + K E I++FR+M+ G+E + + L
Sbjct: 152 YVKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVAL 211
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
+SVLSAC +LG +LG+WVH FV + + L A+ DMY KCG +++AL VF+ + +
Sbjct: 212 LSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQ 271
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K++ TW ++I G A+HG G EAV++F +M+ + P+D+T +AVL+ CSH GL + G+
Sbjct: 272 KSIVTWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWY 331
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F M YK++P V+HYGC++DLL RA L EA +I++MP + NA +WG+LL A +
Sbjct: 332 FKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHG 391
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
D EL E A+ LI+LEP N GNY+L+SNIYA + +WD ++R M++R + PG
Sbjct: 392 D---TELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGA 448
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARMP 519
S I+++ +VHEF DG HP +I +L + +++ + A +P
Sbjct: 449 SSIDVDGMVHEFTSRDGSHPSLHKIREVLCAINSNIKSVGHIALLP 494
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 129/254 (50%), Gaps = 9/254 (3%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I+ V S +A A +F+ + + ++ VI YA+ I+++ +M G++PD
Sbjct: 148 MIDGYVKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPD 207
Query: 131 SFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
+L ACGDL V + VH V++ + I + +I Y G VK A +F
Sbjct: 208 GVALLSVLSACGDLGVVDLGEWVHRFVLR-RGLCQEIPLMNAIIDMYVKCGSVKKALEVF 266
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+ M +K++VTWT MI G E ++LFR+M V N++T ++VLS C+++G ++
Sbjct: 267 EGMEQKSIVTWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTD 326
Query: 248 LGKWVHE-FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGG 305
LG+W + V++ I + + D+ + G + EA + + + + N W +++
Sbjct: 327 LGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAA 386
Query: 306 LAIHG---CGEEAV 316
HG GE+A+
Sbjct: 387 ARTHGDTELGEQAL 400
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 185/533 (34%), Positives = 297/533 (55%), Gaps = 96/533 (18%)
Query: 35 PLLQKCTHLVQFKQVHAQIIKASFDNRTISD-TQLAKLI--ESLVNSSQIAYAHLVFNQI 91
PL ++C L Q KQVHA ++ F +SD + L +L+ ++ IA+A+LVF+QI
Sbjct: 13 PLWRRCRSLRQIKQVHALMVLRGF----LSDPSALRELLFASAVAVRGAIAHAYLVFDQI 68
Query: 92 INPSTFAFNTVIRGYAEA---------------------------------------GLG 112
P F +NT+IRG A G G
Sbjct: 69 PRPDLFMYNTLIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGAG 128
Query: 113 HRGIQLYTQMIGNGLDPDSFTYPILL---KACGDLRQVKGVHSLVVKSKD------FNSV 163
G Q++ ++ G + D+F L+ +CG+L GV S + + ++++
Sbjct: 129 GTGAQVHAHVVKAGCESDAFVRNALIGMHASCGEL----GVASALFDGRAREDAVAWSAM 184
Query: 164 IHSLTR------------------------LITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
I R +IT Y G++ A++LF+++ E++VV+W
Sbjct: 185 ITGCARRGDIVAARKLFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIPERDVVSWN 244
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE----- 254
AMI+GHV+ ++ ++LF +M+ G + + +T++S+LSACA+ G ++G+ +H
Sbjct: 245 AMISGHVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACADSGDIDVGRRLHSSLSEM 304
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
F+ ++ LG AL DMYAKCG ++ AL+VF ++ +K+V TWNSIIGGLA+HG E
Sbjct: 305 FLRTGFTVI---LGNALIDMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGHVLE 361
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
++ +F +M ++PD++T +AVL ACSH G+++KG+E F M+ Y++EPNVKHYGC+V
Sbjct: 362 SIDVFKKMLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYGCMV 421
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
D+L RA LL EA+E I M +EPN+V+W +LL AC + +ELAE A +L+K
Sbjct: 422 DMLGRAGLLKEAFEFIDTMKVEPNSVIWRTLLGACRVHGE---IELAEHANRQLLKARND 478
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE--INDVVHEF 485
G+YVL+SNIYA+ +W ++ KMR+LM + + K G +V++ D++ F
Sbjct: 479 ESGDYVLLSNIYASAGEWSESEKMRKLMDDSGVNKQAGRTVVDGSAKDLMQSF 531
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 19/289 (6%)
Query: 135 PILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLI--TFYCNFGDVKSAQLLFDQMTE 192
P L + C LRQ+K VH+L+V + F S +L L+ + G + A L+FDQ+
Sbjct: 12 PPLWRRCRSLRQIKQVHALMVL-RGFLSDPSALRELLFASAVAVRGAIAHAYLVFDQIPR 70
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKM--RDS--GVEVNELTLVSVLSACANLGASEL 248
++ + +I G R+ + L+ +M R S GV +++T VL AC +GA
Sbjct: 71 PDLFMYNTLIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGAGGT 130
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G VH V K + + AL M+A CG + A +F ++ W+++I G A
Sbjct: 131 GAQVHAHVVKAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDAVAWSAMITGCAR 190
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
G A K+F + + D V+ ++TA + G + + +F + E +V
Sbjct: 191 RGDIVAARKLFDECPVK----DHVSWNVMITAYAKRGEMAPARVLFNRI-----PERDVV 241
Query: 369 HYGCLVD--LLCRARLLD-EAYEVIRNMPMEPNAVLWGSLLTACASADD 414
+ ++ + C + + E +E ++ M +P+ V SLL+ACA + D
Sbjct: 242 SWNAMISGHVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACADSGD 290
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 181/509 (35%), Positives = 273/509 (53%), Gaps = 38/509 (7%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
+ Q KQ HA+I+ N + L + +S YA ++N I +P+ FA N +
Sbjct: 44 ITQIKQAHARILVLGLANDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNNM 103
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLD-PDSFTYPILLKACGD---LRQVKGVHSLVVK-- 156
IR + + L I LY+ M + + P+ T +L+AC + +R+ V + V+K
Sbjct: 104 IRCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKLG 163
Query: 157 -SKDF---NSVIH-------------------------SLTRLITFYCNFGDVKSAQLLF 187
KD N++IH S +I + G + AQ LF
Sbjct: 164 FVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLF 223
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+M EK+V++W +I+G V+ + +D F+++ + + NE LVS+L+A A LG E
Sbjct: 224 VEMPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLE 283
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
GK +H N + LG AL DMYAKCG I+E+ +F + EK+ +WN +I GLA
Sbjct: 284 YGKRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLA 343
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
HG G+EA+ +F + G P +VT I VLTACS AGL+ +GK F M Y +EP +
Sbjct: 344 THGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEM 403
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+HYGC+VDLL RA + +A E+I MP P+ VLW S+L +C +EL E +
Sbjct: 404 EHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVH---GFIELGEEIGNK 460
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
LI+++P ++G+YV ++ I+A +W+D K+RRLM ERN K G S+IE VH F+
Sbjct: 461 LIQMDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIEAEGRVHRFVA 520
Query: 488 GDGRHPCSEEIYSMLEYVAISLREECYAA 516
GD H + EIY MLE + + + Y+A
Sbjct: 521 GDKEHERTTEIYKMLEIMGVRIAAAGYSA 549
>gi|297798072|ref|XP_002866920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312756|gb|EFH43179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 170/451 (37%), Positives = 266/451 (58%), Gaps = 17/451 (3%)
Query: 35 PLLQKC---THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
P+ + C + + + KQ+H + K F + L S A VF+Q+
Sbjct: 111 PVFKACGKFSGIREGKQIHGTVTKMGFYDDIYVQNSLVHFYGVCGESRN---ACKVFDQM 167
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVK 148
++ +I G+ GL + +++M ++P+ TY L + G L K
Sbjct: 168 PVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCALVSSGRVGCLSLGK 224
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
G+H L++K S + + LI Y + A +F ++ +K+ V+W +MI+G V
Sbjct: 225 GIHGLILKRASLIS-LETGNALIDMYVKCEQLSDAMTVFGELQKKDKVSWNSMISGLVHC 283
Query: 209 KNYREGIDLFRKMR-DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
+ E I+LF M+ SG++ + L SVLSACA+LGA + G+WVHE+V I + +
Sbjct: 284 ERSNEAIELFSMMQTSSGIKPDGHILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHI 343
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
G A+ DMYAKCGYIE AL++F + KNV TWN+++GGLAIHG G E+++ F +M G
Sbjct: 344 GTAIVDMYAKCGYIETALKIFNGIRRKNVFTWNALLGGLAIHGHGHESLRYFEEMVKLGF 403
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMR-RDYKVEPNVKHYGCLVDLLCRARLLDEA 386
KP+ VT +A+L AC H GL+++G+ F+ M+ R+Y + P ++HYGCL+DL CRA LLDEA
Sbjct: 404 KPNLVTFLAILNACCHTGLVDEGRRYFHKMKTREYNLSPKLEHYGCLIDLFCRAGLLDEA 463
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
E+I+ MP++P+ + G++L+AC S G +EL + ++ +++E + G YVL+SNI+
Sbjct: 464 LELIKAMPVKPDVRICGAVLSACKSR--GTLMELPKEILDSFLEMEFEDSGVYVLLSNIF 521
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
AA +WDD ++RRLMK + I K PG S IE
Sbjct: 522 AANRRWDDVSRIRRLMKVKGISKVPGSSSIE 552
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 203/389 (52%), Gaps = 27/389 (6%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA--KLIESLVNSSQIA-YAHLVFNQ 90
L L+ +C+ L FKQ+ Q+I +R I +L K++ L S+ A Y+ ++ +
Sbjct: 10 LELISRCSSLRVFKQIQTQLI-----SRDILRDELFINKVVTFLGKSADFATYSSVILHS 64
Query: 91 IINP-STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQ 146
I + S+F++NT++ YA I +Y + NG PD FT+P + KACG +R+
Sbjct: 65 IRSVLSSFSYNTLLSSYAVCDKPRMTIFVYRVFVSNGFSPDMFTFPPVFKACGKFSGIRE 124
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
K +H V K F I+ L+ FY G+ ++A +FDQM ++VV+WT +I G
Sbjct: 125 GKQIHGTVTK-MGFYDDIYVQNSLVHFYGVCGESRNACKVFDQMPVRDVVSWTGIITGFT 183
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ Y+E +D F KM VE N T V L + +G LGK +H + K +++ +
Sbjct: 184 RTGLYKEALDTFSKM---DVEPNLATYVCALVSSGRVGCLSLGKGIHGLILKRASLISLE 240
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM-S 325
G AL DMY KC + +A+ VF + +K+ +WNS+I GL EA+++F MQ S
Sbjct: 241 TGNALIDMYVKCEQLSDAMTVFGELQKKDKVSWNSMISGLVHCERSNEAIELFSMMQTSS 300
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK---HYG-CLVDLLCRAR 381
GIKPD L +VL+AC+ G ++ G+ + +Y + +K H G +VD+ +
Sbjct: 301 GIKPDGHILTSVLSACASLGAVDYGRWV-----HEYVLSAGIKWDTHIGTAIVDMYAKCG 355
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
++ A ++ N N W +LL A
Sbjct: 356 YIETALKIF-NGIRRKNVFTWNALLGGLA 383
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 160/471 (33%), Positives = 273/471 (57%), Gaps = 9/471 (1%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
++VH++++ ++ L + + A +VF+++ ++NT+I GY
Sbjct: 181 RRVHSEVVVCGLESDIYVGNSLLAMYAKF---GDMGTARMVFDRMAERDLTSWNTMISGY 237
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSV 163
A+ ++ M GL D T LL AC DL+ VK +H V++ N
Sbjct: 238 AKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYN 297
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
LI YCN + A+ LF+++ K+ V+W +MI G+ + + E + LFR+M
Sbjct: 298 KFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMAL 357
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
G +++T ++VL AC + A G +H ++ K N +G AL DMY+KCG +
Sbjct: 358 DGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLAC 417
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
+ RVF + +K++ +W++++ G +HG G EA+ + M+ + + PD+ ++L+ACSH
Sbjct: 418 SRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSH 477
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
AGL+ +GKEIFY M ++Y V+P + HY C+VDLL RA LDEAY +IR M ++P + +W
Sbjct: 478 AGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWA 537
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LLTA + N++LAEI+ +++ + P +Y+ +SNIYAA+ +WDD ++R +++
Sbjct: 538 ALLTA---SRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVR 594
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ + K+PGCS IE++++VH F+VGD H +E+IY+ L + L+E Y
Sbjct: 595 RKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGY 645
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/421 (32%), Positives = 218/421 (51%), Gaps = 27/421 (6%)
Query: 8 NSQLTHFTNSANSHKNSNTATKSHHHL-----------PLLQKCTHLVQFKQ---VHAQI 53
NS +HF+ + + + H L LLQ T+ FKQ +HA +
Sbjct: 26 NSFTSHFSQGDVAQMVERSLSMREHPLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHM 85
Query: 54 IKAS-FDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLG 112
I S +N T +T+LA SQ A ++F+ I+ ++F +N +IRGYA GL
Sbjct: 86 ISFSILENNTYLNTKLAAFYAGCGLMSQ---AEVIFDGIVLKNSFLWNFMIRGYASNGLP 142
Query: 113 HRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTR 169
+ + LY +M+ G D+FTYP +LKACGDL V + VHS VV S I+
Sbjct: 143 MKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVC-GLESDIYVGNS 201
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
L+ Y FGD+ +A+++FD+M E+++ +W MI+G+ K + +F M +G+ +
Sbjct: 202 LLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFAD 261
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCII-LNDKLGAALTDMYAKCGYIEEALRVF 288
TL+ +LSACA+L A + GK +H + +N I N +L +MY C + +A R+F
Sbjct: 262 CTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLF 321
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
+ V K+ +WNS+I G A +G E++++F +M + G PD VT IAVL AC +
Sbjct: 322 ERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALR 381
Query: 349 KGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
G I Y +++ + + N LVD+ + L + V MP + + V W +++
Sbjct: 382 YGMSIHSYLVKKGF--DANTIVGTALVDMYSKCGSLACSRRVFDEMP-DKSLVSWSAMVA 438
Query: 408 A 408
Sbjct: 439 G 439
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/465 (35%), Positives = 267/465 (57%), Gaps = 38/465 (8%)
Query: 72 IESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS 131
I L++ +++ A+ VFN+ +N++I G + GL I++Y +M + P+
Sbjct: 200 ITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNE 259
Query: 132 FTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
T ++ +C DL K H + K I L+ Y G++ +A++LFD
Sbjct: 260 ITMIGMISSCSQVQDLNLGKEFHCYI-KEHGLEFTIPLTNALMDMYVKCGELLTARVLFD 318
Query: 189 QMTEKNVVTWTAM-------------------------------INGHVKQKNYREGIDL 217
M +K +V+WT M I+G V+ K +E + L
Sbjct: 319 NMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALAL 378
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
F +M+ +E +++T+V+ LSAC+ LGA ++G W+H ++ ++ + ++ LG AL DMYAK
Sbjct: 379 FHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAK 438
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG I AL+VF+ + ++N TW ++I GLA+HG ++A+ F +M GI PD++T + V
Sbjct: 439 CGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGV 498
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
L+AC H GL+E+G++ F M + V P +KHY C+VDLL RA L+EA E+++NMPM
Sbjct: 499 LSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAA 558
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
+A + G+L AC NV++ E +L++++P + GNYVL++++Y+ W +A
Sbjct: 559 DAAVLGALFFACRVY---GNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARS 615
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
R+LM ++ + K PGCS++EIN +VHEF+V D HP SE IY L
Sbjct: 616 ARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYECL 660
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 215/437 (49%), Gaps = 38/437 (8%)
Query: 8 NSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQ 67
+S L+ T + N + +++ + + L +L++C LVQ KQ+ AQ++ + ++
Sbjct: 36 SSSLSPITKTINWN-TTHSFVRENPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASR 94
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNG 126
L +L S ++ Y + +I + F++N IRGY E+G G LY +M+ G
Sbjct: 95 LVAFC-ALSESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGT 153
Query: 127 LDPDSFTYPILLKAC-GDLRQVKGVHSLV-VKSKDFNSVIHSLTRLITFYCNFGDVKSAQ 184
L PD+ TYP+LLK C G G+ L V F I IT + G++ A
Sbjct: 154 LKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAY 213
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
+F++ +++VTW +MI G VK+ E I ++++M V NE+T++ ++S+C+ +
Sbjct: 214 DVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQ 273
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC-------------------------- 278
LGK H ++ ++ + L AL DMY KC
Sbjct: 274 DLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVL 333
Query: 279 -----GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVT 333
G+++ A + + EK+V WN+II G G+EA+ +F +MQ+ I+PD VT
Sbjct: 334 GYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVT 393
Query: 334 LIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
++ L+ACS G ++ G I + + R +K+ +V LVD+ + + A +V +
Sbjct: 394 MVNCLSACSQLGALDVGIWIHHYIER-HKLSIDVALGTALVDMYAKCGNIARALQVFEEI 452
Query: 394 PMEPNAVLWGSLLTACA 410
P + N + W +++ A
Sbjct: 453 P-QRNCLTWTAVICGLA 468
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/451 (37%), Positives = 271/451 (60%), Gaps = 16/451 (3%)
Query: 76 VNSSQIAYAHLVFNQII--NP-STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSF 132
+ + + YA V ++++ P F NTV+R A + ++L+ + + PD+
Sbjct: 749 LRAPPLRYAVAVLSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELHRRRLAL---PDTH 805
Query: 133 TYPILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
TYP L++AC L R+ + +H+ K+ F +++ L+ Y G +SA +FD+
Sbjct: 806 TYPPLIQACARLLALREGECLHAEAAKN-GFVTLVFVQNSLVHLYGACGLFESAHKVFDE 864
Query: 190 MT--EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
M +N+V+W +M+N E + +F +M + T+VSVL+ACA GA
Sbjct: 865 MPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALA 924
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGL 306
LG+ VH +V K ++ N + AL D+YAKCG + +A R+F+ + L + V +W S+I GL
Sbjct: 925 LGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGL 984
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
A +G G+EA+++F M+ + P ++T++ VL ACSH GL++ G F M+ DY + P
Sbjct: 985 AANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPR 1044
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
++H GC+VDLL RA ++EAY+ I MP+EPNAV+W +LL +CA +EL ++A E
Sbjct: 1045 IEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHK---KLELGKVAWE 1101
Query: 427 RLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFM 486
RL++L+P + G+YVL+SN+YAA W D +R+ M + + KNPG S++E+ + V+EF+
Sbjct: 1102 RLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFV 1161
Query: 487 VGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
+GD HP SE+IY ML +A LR E Y R
Sbjct: 1162 MGDRSHPESEQIYEMLAEIAERLRREGYIPR 1192
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 17/301 (5%)
Query: 21 HKNSNTATKSHHHLPLLQKCTHLVQFKQ---VHAQIIKASFDNRTISDTQLAKLIESLVN 77
H+ +H + PL+Q C L+ ++ +HA+ K F L L +
Sbjct: 795 HRRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGA--- 851
Query: 78 SSQIAYAHLVFNQ--IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYP 135
AH VF++ + + ++N+++ +A G + + ++ +M+G PD FT
Sbjct: 852 CGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIV 911
Query: 136 ILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM-T 191
+L AC G L + VH V K + H LI Y G V A+ +F++M
Sbjct: 912 SVLTACAEFGALALGRRVHVYVEKVGLVENS-HVSNALIDLYAKCGSVNDARRIFEEMGL 970
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+ VV+WT++I G +E ++LF M + E+T+V VL AC++ G + G
Sbjct: 971 GRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFR 1030
Query: 252 VHEFVNKNCIILN--DKLGAALTDMYAKCGYIEEAL-RVFKIVLEKNVCTWNSIIGGLAI 308
+ + ++ I + LG + D+ + G +EEA + + LE N W +++G A+
Sbjct: 1031 YFDRMKEDYGISPRIEHLG-CMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAM 1089
Query: 309 H 309
H
Sbjct: 1090 H 1090
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/489 (33%), Positives = 278/489 (56%), Gaps = 16/489 (3%)
Query: 36 LLQKC---THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL+ C +HL + VHAQ+ + F+ L L ++ A VF +
Sbjct: 125 LLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIAL---YAKCRRLGCARTVFEGLP 181
Query: 93 NP--STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA---CGDLRQV 147
P + ++ ++ YA+ G +++++QM + PD +L A DL Q
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQG 241
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ +H+ V+K + L L T Y G V +A++LFD+M N++ W AMI+G+ K
Sbjct: 242 RSIHASVMK-MGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
++ IDLF +M + V + +++ S +SACA +G+ E +W+ E+V+++ + +
Sbjct: 301 NGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFI 360
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
+AL DM+AKCG +E A VF L+++V W+++I G +HG EA+ ++ M+ G+
Sbjct: 361 SSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGV 420
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
P+DVT + +L AC+H+G++ +G F+N D+K+ P +HY C++DLL RA LD+AY
Sbjct: 421 HPNDVTFLGLLIACNHSGMVREG-WWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAY 479
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
EVI+ MP++P +WG+LL+AC +VEL + A ++L ++P N G+YV +SN+YA
Sbjct: 480 EVIKCMPVQPGVTVWGALLSACKKH---RHVELGKYAAQQLFSIDPSNTGHYVQLSNLYA 536
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
A WD ++R MKE+ + K+ GCS +E+ + F VGD HP EEI +E++
Sbjct: 537 AARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIES 596
Query: 508 SLREECYAA 516
L+E + A
Sbjct: 597 RLKEGGFVA 605
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 206/401 (51%), Gaps = 21/401 (5%)
Query: 14 FTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE 73
+TNS H +S A+ L+ TH Q +Q+HA+++ S + KLI
Sbjct: 13 YTNSG-IHSDSFYAS-------LIDSSTHKAQLRQIHARLLVLGLQ---FSGFLITKLIH 61
Query: 74 SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFT 133
+ + I +A VF+ + P F +N +IRGY+ + +Y++M + PDSFT
Sbjct: 62 ASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFT 121
Query: 134 YPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD-- 188
+P LLKACG L + + VH+ V + F + + LI Y + A+ +F+
Sbjct: 122 FPHLLKACGGLSHLQMGRFVHAQVFR-LGFEADVFVQNGLIALYAKCRRLGCARTVFEGL 180
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
+ E+ +V+WTA+++ + + E +++F +MR V+ + + LVSVL+A L E
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQ 240
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G+ +H V K + L +L MYAKCG + A +F + N+ WN++I G A
Sbjct: 241 GRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNV 367
+G ++A+ +F +M ++PD +++ + ++AC+ G +E+ + + Y R DY+ + +
Sbjct: 301 NGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFI 360
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
L+D+ + ++ A V + ++ + V+W +++
Sbjct: 361 S--SALIDMFAKCGSVECARSVF-DRTLDRDVVVWSAMIVG 398
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 276/487 (56%), Gaps = 16/487 (3%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL++CTHL + K +HA ++ + F + + L L + YA +F+++
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLY---AKCGDLVYARKLFDEMS 77
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG-----DLRQV 147
+ + +I GY++ + L +M+ GL P+ FT LLKA D+ Q
Sbjct: 78 SRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQG 137
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ +H L ++ ++S ++ ++ Y ++ AQL+FD M KN V+W A+I G+ +
Sbjct: 138 RQLHGLCLRY-GYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYAR 196
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
+ + LF M V+ T SVL ACA++G+ E GKWVH + K L +
Sbjct: 197 KGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFV 256
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
G L DMYAK G IE+A +VF + +++V +WNS++ G + HG G+ A++ F +M + I
Sbjct: 257 GNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRI 316
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
P+D+T + VLTACSHAGL+++G+ +++M + Y VEP + HY +VDLL RA LD A
Sbjct: 317 APNDITFLCVLTACSHAGLLDEGRH-YFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAI 375
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
+ I MP++P A +WG+LL AC N+EL A E + +L+ G +VL+ NIYA
Sbjct: 376 QFISEMPIKPTAAVWGALLGACRMHK---NMELGGYAAECIFELDSHYPGTHVLLYNIYA 432
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
+W+DA K+R++MKE + K P CS +E+ + VH F+ D HP EI++M E ++
Sbjct: 433 LAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISD 492
Query: 508 SLREECY 514
++E Y
Sbjct: 493 KIKEIGY 499
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 227/350 (64%), Gaps = 3/350 (0%)
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
+I Y GD A+ LFD M E+NVV+WT +I G+ + K + +++FR+M+ G+E +
Sbjct: 150 MIAGYVKAGDQAHARELFDAMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEAD 209
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
+ L+SVL+AC +LGA +LG+WVH FV + + L ++ DMY KCG IE+A+ VF+
Sbjct: 210 GVALLSVLAACGDLGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFE 269
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ EK+V TW ++I G A+HG G +AV+MF +M+ + P+ VT +A+L+ACSH GL +
Sbjct: 270 GMEEKSVVTWTTLIAGFALHGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDL 329
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
G+ F M Y+++P V+HYGC+VDLL RA L EA ++++NMP++ NA +WG+LL A
Sbjct: 330 GRWYFNIMVSQYRIKPRVEHYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAA 389
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
+ D L E A+ LI+LEP N GNY+L+SNI+A + +W D K+R+ M+ER +
Sbjct: 390 RTHGDAG---LGEQALLHLIELEPNNSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRN 446
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARMP 519
PG S IE++ +VHEF D HP I +L + +++ +A+ P
Sbjct: 447 VPGASSIEVDGMVHEFTSRDWSHPFIHTICEVLCEIDTNMKSVGFASVFP 496
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 148/307 (48%), Gaps = 21/307 (6%)
Query: 22 KNSNTATKSHHHLPLLQ---KCTHLVQFKQVHAQIIKASFDNRTISDT-QLAKLIESLVN 77
+ + A+ +H L+Q C H+ + V FD + D +I V
Sbjct: 105 RTGHVASDAHVSSSLVQLYCTCGHVADARSV--------FDEMAVRDVVAWNVMIAGYVK 156
Query: 78 SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPIL 137
+ A+A +F+ + + ++ TVI GYA+ + ++++ +M G++ D +
Sbjct: 157 AGDQAHARELFDAMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSV 216
Query: 138 LKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
L ACGDL V + VH VV+ + I + +I Y G ++ A +F+ M EK+
Sbjct: 217 LAACGDLGAVDLGEWVHRFVVR-RGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKS 275
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
VVTWT +I G + +++F +M + N +T +++LSAC+++G ++LG+W
Sbjct: 276 VVTWTTLIAGFALHGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFN 335
Query: 255 -FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIH--- 309
V++ I + + D+ + G ++EA + K + L+ N W +++ H
Sbjct: 336 IMVSQYRIKPRVEHYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDA 395
Query: 310 GCGEEAV 316
G GE+A+
Sbjct: 396 GLGEQAL 402
>gi|449441061|ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
gi|449477575|ref|XP_004155061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/464 (37%), Positives = 269/464 (57%), Gaps = 14/464 (3%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQ 80
N K + L ++C+ L Q+HA II+ FD + KLI+ ++ +
Sbjct: 48 NGGYFAKEQKFMFLFKQCSTLKDLNQLHASIIRLGFDQNLFV---IGKLIDFCAVSDHGD 104
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
+ YA +VF++I N F +NT+IRG+ + Y +M+ G+ D+FT+ LLK
Sbjct: 105 MNYAVVVFDRIENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKM 164
Query: 141 CGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVT 197
G L + K +H ++K +S ++ LI Y DV A+ LFD++ + ++V
Sbjct: 165 TGQLGSIMLGKQLHVNILK-LGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVA 223
Query: 198 WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
W A+I+ HV Y E +DLF +M SGVE +E TLV +SAC+ LGA + G+WVH VN
Sbjct: 224 WNAVIDCHVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVN 283
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
N + +L DMYAKCG +E A +F V KN+ TWN++I GLA HG E+A+
Sbjct: 284 SNDRGKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALT 343
Query: 318 MFWQMQMSGIK-PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDL 376
+F M ++ PD VT +AVL AC++ G +E+G+ F M + + ++P +KHYG +VD+
Sbjct: 344 LFSNMLAERVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDI 403
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFND 436
L RA ++EAY++I++MPME NAV+W +LL AC NVEL E ++++ +
Sbjct: 404 LGRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQMH---GNVELGERVSSHVLEIVADHS 460
Query: 437 GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK-NPGCSVIEIN 479
+YVL++N+YA+ QW++ K R+ M + + K PG S +EIN
Sbjct: 461 SDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEIN 504
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 280/517 (54%), Gaps = 54/517 (10%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+L+ C + HAQI+ + F + + L L+ ++ + A VF I
Sbjct: 31 FSVLKSCVSFRNLAKTHAQIVVSGFSQK---NYILNHLLSLYISFGSLGSAQKVFEDITA 87
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGV 150
PST +N +I+G+ + + I+L+ +M G++ + FTY LL AC R+ + +
Sbjct: 88 PSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQI 147
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGD-----VKSAQLLFDQMTEKNVVTWTAMINGH 205
H V+ + + S ++ T LI Y N GD +K A LFD+M + NVV W +++ G+
Sbjct: 148 HGRVLVN-GYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNSLLAGY 206
Query: 206 VKQKNY-------------------------------REGIDLFRKMRDSGVEVNELTLV 234
V++ ++ + + LF +MR +GVE++++ LV
Sbjct: 207 VRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALV 266
Query: 235 SVLSACANLGASELGKWVHEFVNKNC----IILNDKLGAALTDMYAKCGYIEEALRVFKI 290
+ LSACA LG LGKW+H +V + + + L AL MYA CG ++ A ++F+
Sbjct: 267 AALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYKLFEE 326
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG---IKPDDVTLIAVLTACSHAGLI 347
+ ++N +W+SII G A GCG EA+++F M SG ++PD++T I LTACSHAGLI
Sbjct: 327 IPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLI 386
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
G +F +M + + V P ++HYGC+VDLL RA LL EA +I +MPM+PN +WG+LL+
Sbjct: 387 SDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLS 446
Query: 408 ACASADDGANVELAEIAMERLIKLEPFND--GNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
C + V + +A +++P N G ++L++N+YAA +W D +RR M +
Sbjct: 447 GCRLHKNDEIV--SHVAKHLSFEIDPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDI 504
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
+ K G S IEIN V+ FMVG+ H IY ML
Sbjct: 505 GVKKPSGRSWIEINGVLCSFMVGEETHKDVNLIYEML 541
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/518 (35%), Positives = 290/518 (55%), Gaps = 49/518 (9%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL+ C L + QVH + K+ F++ L ++ ++ A VF++
Sbjct: 86 LLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNALLQVYFVFGDARN---ACRVFDESP 142
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL------RQ 146
+ ++NTVI G AG ++++ +M G ++PD +T+ LL AC L R
Sbjct: 143 VRDSVSYNTVINGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRV 202
Query: 147 VKG------------------------------VHSLVVKSKDFNSVIHSLTRLITFYCN 176
V G V VV++ + S + + T L++ Y
Sbjct: 203 VHGLVYRKLGCFGENELLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYAL 262
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
G+V+ A+ LFDQM E++VV+WTAMI+G+ ++E ++LF ++ D G+E +E+ +V+
Sbjct: 263 RGEVEVARRLFDQMGERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAA 322
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLG--AALTDMYAKCGYIEEALRVFKIVLE- 293
LSACA LGA ELG+ +H +++ G A+ DMYAKCG IE AL VF +
Sbjct: 323 LSACARLGALELGRRIHHKYDRDSWQCGHNRGFTCAVVDMYAKCGSIEAALDVFLKTSDD 382
Query: 294 -KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
K +NSI+ GLA HG GE A+ +F +M++ G++PD+VT +A+L AC H+GL++ GK
Sbjct: 383 MKTTFLYNSIMSGLAHHGRGEHAMALFEEMRLVGLEPDEVTYVALLCACGHSGLVDHGKR 442
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
+F +M +Y V P ++HYGC+VDLL RA L+EAY +I+NMP + NAV+W +LL+AC
Sbjct: 443 LFESMLSEYGVNPQMEHYGCMVDLLGRAGHLNEAYLLIQNMPFKANAVIWRALLSACKVD 502
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
D VELA +A + L+ +E + YV++SN+ + D+A +RR + I K PG
Sbjct: 503 GD---VELARLASQELLAMENDHGARYVMLSNMLTLMDKHDEAASVRRAIDNVGIQKPPG 559
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
S +E+N +H+F+ GD HP ++ ML + + L+
Sbjct: 560 WSHVEMNGTLHKFLAGDKSHPEAKATEFMLRDIDMGLK 597
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 206/398 (51%), Gaps = 43/398 (10%)
Query: 77 NSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG--LDPDSFTY 134
NS+ + ++HL+F QI NP F FN +IR ++ + H + LY +M+ + + PD+FT+
Sbjct: 24 NSNALHHSHLLFTQIPNPDLFLFNLIIRAFSLSQTPHNALSLYKKMLSSSPPIFPDTFTF 83
Query: 135 PILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
P LLK+C L R VH+ V KS F S + + L+ Y FGD ++A +FD+
Sbjct: 84 PFLLKSCAKLSLPRLGLQVHTHVFKSG-FESNVFVVNALLQVYFVFGDARNACRVFDESP 142
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
++ V++ +ING V+ + +F +MR VE +E T V++LSAC+ L +G+
Sbjct: 143 VRDSVSYNTVINGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRV 202
Query: 252 VHEFVNK--NCIILNDKLGAALTDMYAKCGYIEEALRV---------------------- 287
VH V + C N+ L AL DMYAKCG +E A RV
Sbjct: 203 VHGLVYRKLGCFGENELLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYAL 262
Query: 288 ----------FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
F + E++V +W ++I G GC +EA+++F +++ G++PD+V ++A
Sbjct: 263 RGEVEVARRLFDQMGERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAA 322
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC-LVDLLCRARLLDEAYEV-IRNMPM 395
L+AC+ G +E G+ I + RD + + + C +VD+ + ++ A +V ++
Sbjct: 323 LSACARLGALELGRRIHHKYDRDSWQCGHNRGFTCAVVDMYAKCGSIEAALDVFLKTSDD 382
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
L+ S+++ A G + +A RL+ LEP
Sbjct: 383 MKTTFLYNSIMSGLAHHGRGEHA-MALFEEMRLVGLEP 419
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 11/252 (4%)
Query: 167 LTRLITFYC--NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
+T LI+F+ N + + LLF Q+ ++ + +I + + L++KM S
Sbjct: 13 MTPLISFFAAANSNALHHSHLLFTQIPNPDLFLFNLIIRAFSLSQTPHNALSLYKKMLSS 72
Query: 225 GVEV--NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ + T +L +CA L LG VH V K+ N + AL +Y G
Sbjct: 73 SPPIFPDTFTFPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNALLQVYFVFGDAR 132
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A RVF ++ ++N++I GL G ++++F +M+ ++PD+ T +A+L+ACS
Sbjct: 133 NACRVFDESPVRDSVSYNTVINGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACS 192
Query: 343 HAGLIEK---GKEIFYNMRRDYK-VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
L+E G+ + + R N LVD+ + L+ A V+RN +
Sbjct: 193 ---LLEDRGIGRVVHGLVYRKLGCFGENELLVNALVDMYAKCGCLEVAERVVRNGNGKSG 249
Query: 399 AVLWGSLLTACA 410
W SL++A A
Sbjct: 250 VAAWTSLVSAYA 261
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 280/504 (55%), Gaps = 45/504 (8%)
Query: 52 QIIKASFDNRTISDTQLAKLIESL-VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAG 110
++ K FD + +T + SL +N ++ A F + ++N++I G + G
Sbjct: 159 KMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHG 218
Query: 111 LGHRGIQLYTQMIGN-GLDPDSFTYPILLKACGDLRQV---KGVHSLVVKS--------- 157
+ +Q ++ ++ + L PD F+ L AC +L ++ K +H +V++
Sbjct: 219 FDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVG 278
Query: 158 -------------------------KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
D + + + T L+ Y GD+ A+ +F+ + +
Sbjct: 279 NALISMYAKSGGVEIARRIIEQSGISDLDVI--AFTALLNGYVKLGDITPARQIFNSLKD 336
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
+VV WTAMI G+V+ + I++F+ M G N TL ++LSA +++ + GK +
Sbjct: 337 PDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQI 396
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE-KNVCTWNSIIGGLAIHGC 311
H ++ L+ +G ALT MYAK G I A +VF ++ + ++ +W S+I LA HG
Sbjct: 397 HASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGL 456
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
GEEA+++F QM GIKPD +T + VL+AC+H GL+E+G+ F M+ +K++P + HY
Sbjct: 457 GEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYA 516
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VDL RA LL EAY+ + NMPMEP+ + WGSLL++C NV+LA++A ERL+ +
Sbjct: 517 CMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYK---NVDLAKVAAERLLLI 573
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
EP N G Y ++N+Y++ +WDDA K+R+LMK R + K G S ++I + H F V DG
Sbjct: 574 EPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGL 633
Query: 492 HPCSEEIYSMLEYVAISLREECYA 515
HP +EIY M++ + +++ +A
Sbjct: 634 HPQKDEIYKMMDKIWKEIKKMGFA 657
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 186/430 (43%), Gaps = 73/430 (16%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
++ ++ AH VF+ I + ++ T+I GY + G I+++ M+ + + P
Sbjct: 47 ILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPT 106
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
FT +L +C G K VHS VVK ++ + L+ Y GD+K A+++F
Sbjct: 107 QFTLTNVLASCAATGSRGIGKKVHSFVVK-LGLHACVPVANSLLNMYAKTGDLKMAKVVF 165
Query: 188 DQM-------------------------------TEKNVVTWTAMINGHVKQKNYREGID 216
D+M +E+++V+W +MI G + E +
Sbjct: 166 DRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQ 225
Query: 217 LFRK-MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
F ++D+ ++ + +L S LSACANL GK +H ++ + + +G AL MY
Sbjct: 226 FFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMY 285
Query: 276 AKCGYIEEALR---------------------------------VFKIVLEKNVCTWNSI 302
AK G +E A R +F + + +V W ++
Sbjct: 286 AKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAM 345
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN-MRRDY 361
I G +G +A+++F M G +P+ TL A+L+A S + GK+I + +R
Sbjct: 346 IVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGE 405
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN-VEL 420
+ P+V + L + +A ++ A +V + + V W S++ A A G +EL
Sbjct: 406 ALSPSVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIEL 463
Query: 421 AEIAMERLIK 430
E + IK
Sbjct: 464 FEQMLTLGIK 473
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 109/220 (49%), Gaps = 32/220 (14%)
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
S +++ Y G ++ A +FD + ++ V+WT +I G+ + + + I +F M
Sbjct: 43 SWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDK 102
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK-------- 277
V + TL +VL++CA G+ +GK VH FV K + + +L +MYAK
Sbjct: 103 VLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAK 162
Query: 278 -----------------------CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
CG ++ AL F+++ E+++ +WNS+I G HG E
Sbjct: 163 VVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNE 222
Query: 315 AVKMFWQ-MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
A++ F ++ + +KPD +L + L+AC++ + GK+I
Sbjct: 223 ALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQI 262
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L ++YAK G+ +A +F + K +WN+I+ G A G E+A ++F + + D
Sbjct: 16 LMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVR----D 71
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
V+ ++ + G E +IF +M +D KV P
Sbjct: 72 SVSWTTIIVGYNQMGRFEDAIKIFVDMVKD-KVLP 105
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/432 (37%), Positives = 266/432 (61%), Gaps = 16/432 (3%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI + +A VF+ ++N+++ GY G ++ +M + D
Sbjct: 151 LISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMP----ERD 206
Query: 131 SFTYPILL----KACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
++ I++ K G++ + + V + ++D + S +I Y G+++ A+ +
Sbjct: 207 VVSWSIMIDGYGKKMGEVNRAR-VFFDSMPTRD----LVSWNSMIDGYAKVGEMEVAREI 261
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD+M +KNV++W+ MI+G+ + ++ +E ++LFR+M G++ + +++V +SAC+ LGA
Sbjct: 262 FDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGAL 321
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
+ G+W+H ++ +N ++L+ + AL DMY KCG +EA R+F + E+NV +WN +I GL
Sbjct: 322 DQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGL 381
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
++G G+EA++ F QM+M I DD+ + VL ACSHA L+ +G IF M+ Y++EP
Sbjct: 382 GMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPK 441
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
++HYGCLVDLL RA LD+ +I++MPM+PNA LWGSLL AC NV LAEI +E
Sbjct: 442 LEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQ---NVTLAEIVVE 498
Query: 427 RLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFM 486
RL +L+ + G YVLMSNIYA W+ ++R+LMKER + K+ G SVIE++ V EF+
Sbjct: 499 RLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFV 558
Query: 487 VGDGRHPCSEEI 498
G+ H EEI
Sbjct: 559 SGEKSHILREEI 570
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 211/410 (51%), Gaps = 25/410 (6%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSS-QIAYAHLVFNQI 91
L LLQK Q Q+HAQ+I + ISDT A +L++S+V+ + + YA LVF QI
Sbjct: 15 LSLLQKSKTSSQILQIHAQLITTNL----ISDTFAASRLLDSVVSKTLNVNYAELVFAQI 70
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVK 148
P++F NT+++ Y E+ R ++ Y +M GL D++TYP +LKACG L +
Sbjct: 71 HQPNSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGG 130
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
V VK + F + + LI+ YC G+ A+ +FD +EK++V+W +M+ G+V
Sbjct: 131 LVQGEAVK-RGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWC 189
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
++F +M + V + + + + + + ++ + N
Sbjct: 190 GEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARV--FFDSMPTRDLVSWN---- 243
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
++ D YAK G +E A +F +L+KNV +W+ +I G A H +EA+ +F QM GIK
Sbjct: 244 -SMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIK 302
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD V+++ ++ACS G +++G+ I M+R+ ++ ++ LVD+ + DEA
Sbjct: 303 PDRVSVVGAVSACSQLGALDQGRWIHLYMKRN-RMLLDIVVQTALVDMYLKCGSRDEARR 361
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVE--LAEIAMERLIKLEPFND 436
+ +MP E N V W ++ G ++ MER+ P +D
Sbjct: 362 IFNSMP-ERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERI----PMDD 406
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/469 (33%), Positives = 265/469 (56%), Gaps = 10/469 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQ+H+ I++ + +T ++ + V + A LVF ++ + A+ ++ GY
Sbjct: 131 KQIHSHAIRSGLGSNASVNTAISNM---YVKCGWLEGAELVFEKMSEKNAVAWTGIMVGY 187
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSV 163
+A + L+ +M+ G++ D + + I+LKAC L ++ + +H +VK S
Sbjct: 188 TQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVK-LGLESE 246
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ T L+ FY +++SA F+ ++E N V+W+A+I G+ + + E + F +R
Sbjct: 247 VSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRT 306
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
V++N T S+ AC+ L G H K+ ++ +A+ MY++CG ++
Sbjct: 307 RSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDY 366
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A RVF+ + + + W +II G A G EA+K+F +MQ G++P+ VT IAVLTACSH
Sbjct: 367 ATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSH 426
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
+GL+ +G++ +M +Y V + HY C+VD+ RA L EA E+IR+MP P+A+ W
Sbjct: 427 SGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWK 486
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
LL C + N+E+ E+A E L +L+P + Y+LM N+YA+ +W +A +R++M
Sbjct: 487 CLLGGCWTYR---NLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMA 543
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
ERN+ K CS I + VH F+VGD HP +EEIYS LE + S+ +E
Sbjct: 544 ERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSVIKE 592
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 178/373 (47%), Gaps = 21/373 (5%)
Query: 54 IKASFDNRTISDTQLAKLI----ESLVNS--------SQIAYAHLVFNQIINPSTFAFNT 101
IK+ FD R + Q+ + + E L NS +A A VF+++ + ++NT
Sbjct: 23 IKSLFDGRLFHE-QMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNT 81
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSK 158
+I YAE G+ +G +++ M+ P+ TY L++ L K +HS ++S
Sbjct: 82 IISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRS- 140
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
S T + Y G ++ A+L+F++M+EKN V WT ++ G+ + + + + LF
Sbjct: 141 GLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALF 200
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
KM + GVE++E VL ACA L G+ +H + K + +G L D Y KC
Sbjct: 201 AKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKC 260
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
+E A + F+ + E N +W+++I G G EEA+K F ++ + + T ++
Sbjct: 261 SNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIF 320
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKH-YGCLVDLLCRARLLDEAYEVIRNMPMEP 397
ACS G + + + V +H ++ + R LD A V ++ +P
Sbjct: 321 QACSALADFNSGAQAHADAIKSSLVA--YQHGESAMITMYSRCGRLDYATRVFESID-DP 377
Query: 398 NAVLWGSLLTACA 410
+AV W +++ A
Sbjct: 378 DAVAWTAIIAGYA 390
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 139/292 (47%), Gaps = 18/292 (6%)
Query: 126 GLDPDSFTYPILLKACGDLRQV-------KGVHSLVVKSKDF--NSVIHSLTRLITFYCN 176
G+ +Y L +ACG ++ + + + V +F NSV+ YC
Sbjct: 5 GISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLK-------MYCK 57
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
G + A+ +FD+M E+N+V+W +I+ + + + +G +F M + + N T +
Sbjct: 58 CGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGF 117
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
L + N E+GK +H ++ + N + A+++MY KCG++E A VF+ + EKN
Sbjct: 118 LRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNA 177
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
W I+ G +A+ +F +M G++ D+ VL AC+ + G++I +
Sbjct: 178 VAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGH 237
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+ + +E V LVD + L+ A + + EPN V W +L+T
Sbjct: 238 IVK-LGLESEVSVGTPLVDFYVKCSNLESATKAFEWIS-EPNDVSWSALITG 287
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M D+G+ V+ + + AC + + G+ HE + + + L ++ MY KCG
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
+ +A +VF + E+N+ +WN+II A +G ++ MF M KP+ T I L +
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
+ +E GK+I + R + N + ++ + L+ A V M E NAV
Sbjct: 121 LLNPSGLEIGKQIHSHAIRS-GLGSNASVNTAISNMYVKCGWLEGAELVFEKMS-EKNAV 178
Query: 401 LWGSLLTACASAD 413
W ++ A+
Sbjct: 179 AWTGIMVGYTQAE 191
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/526 (34%), Positives = 284/526 (53%), Gaps = 49/526 (9%)
Query: 23 NSNTATKSHHHLPLL--------QKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIES 74
NS+T ++ H LL C +L Q KQ+H +++ D T+L + +
Sbjct: 35 NSSTFSEISHQRELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTK 94
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
L Y V + + F + VIRGY G I +Y M + P SFT+
Sbjct: 95 L-GVPMDPYPRRVIEPVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTF 153
Query: 135 PILLKACG---DLRQVKGVHSLVVKSKDF------NSVIH-------------------- 165
LLKACG DL + H+ + + F N++I
Sbjct: 154 SALLKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPE 213
Query: 166 ----SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
S T LI Y G+++SA LF+ + K++V WTAM+ G + +E ++ F +M
Sbjct: 214 RDVISWTELIAAYARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRM 273
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK--LGAALTDMYAKCG 279
SG+ +E+T+ +SACA LGAS+ + K+ +D +G+AL DMY+KCG
Sbjct: 274 EKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCG 333
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF-WQMQMSGIKPDDVTLIAVL 338
+EEA+ VF + KNV +++S+I GLA HG +EA+ +F + + + IKP+ VT + L
Sbjct: 334 NVEEAVNVFVSMNNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGAL 393
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
TACSH+GL+++G+++F +M + + VEP HY C+VDLL RA L EA E+I+ M +EP+
Sbjct: 394 TACSHSGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPH 453
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
+WG+LL AC + N ++AEIA E L +LEP GNY+L+SN+Y++ W +
Sbjct: 454 GGVWGALLGACRIHN---NPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSV 510
Query: 459 RRLMKERNIVKNPGCS-VIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
R+L+KE+ + K P S V++ N +H+F G+ HP S++I LE
Sbjct: 511 RKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSKKIQDKLE 556
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/406 (38%), Positives = 245/406 (60%), Gaps = 10/406 (2%)
Query: 117 QLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
QL++ ++ G D L++A CG + + V D + S +I
Sbjct: 92 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYAD----VVSWNVMIDG 147
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y GD+ A+ LFD M +NVV+WT +I + + K E I++FR+M+ G+E + + L
Sbjct: 148 YVKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVAL 207
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
+SVLSAC +LG +LG+WVH FV + + L A+ DMY KCG +++AL VF+ + +
Sbjct: 208 LSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQ 267
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K++ TW ++I G A+HG G EAV++F +M+ + P+D+T +AVL+ CSH GL + G+
Sbjct: 268 KSIVTWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWY 327
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F M YK++P V+HYGC++DLL RA L EA +I++MP + NA +WG+LL A +
Sbjct: 328 FKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHG 387
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
D EL E A+ LI+LEP N GNY+L+SNIYA + +WD ++R M++R + PG
Sbjct: 388 D---TELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGA 444
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARMP 519
S I+++ +VHEF DG HP +I +L + +++ + A +P
Sbjct: 445 SSIDVDGMVHEFTSRDGSHPSLHKIREVLCAINSNIKSVGHIALLP 490
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 129/254 (50%), Gaps = 9/254 (3%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I+ V S +A A +F+ + + ++ VI YA+ I+++ +M G++PD
Sbjct: 144 MIDGYVKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPD 203
Query: 131 SFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
+L ACGDL V + VH V++ + I + +I Y G VK A +F
Sbjct: 204 GVALLSVLSACGDLGVVDLGEWVHRFVLR-RGLCQEIPLMNAIIDMYVKCGSVKKALEVF 262
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+ M +K++VTWT MI G E ++LFR+M V N++T ++VLS C+++G ++
Sbjct: 263 EGMEQKSIVTWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTD 322
Query: 248 LGKWVHE-FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGG 305
LG+W + V++ I + + D+ + G + EA + + + + N W +++
Sbjct: 323 LGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAA 382
Query: 306 LAIHG---CGEEAV 316
HG GE+A+
Sbjct: 383 ARTHGDTELGEQAL 396
>gi|242042383|ref|XP_002468586.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
gi|241922440|gb|EER95584.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
Length = 581
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/512 (34%), Positives = 272/512 (53%), Gaps = 40/512 (7%)
Query: 35 PLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINP 94
P L T + + +Q H+Q+I+ + +L + +S YA + P
Sbjct: 15 PTLIPLTSIAELRQHHSQLIRLGVASHPAHARRLLSFLARDPDS-HFPYASRLLAHHPAP 73
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLV 154
FN + +L M+ L PD FT+P +L L V +H+L+
Sbjct: 74 HPALFNPLFSALPT----RHAARLLALMLSLPLHPDHFTFPRILPGAQPLHLVAQLHALL 129
Query: 155 VK---------------------SKDFNSVIH-----------SLTRLITFYCNFGDVKS 182
+K D S + S T ++ G V
Sbjct: 130 LKLGFHAHTQSLNALLAAYLANARPDLASRVFRGGGGDALDVVSWTTMVGGLVKLGRVDD 189
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A+ LFD M E+N+V+W AM++G+VK + + +++F +MR GV+ N + + AC
Sbjct: 190 ARELFDGMPERNLVSWNAMMSGYVKTGRFLDALEVFDEMRARGVDGNAFVAATAVVACTG 249
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
GA G+ VH +V ++ I ++DKL A+ DMY KCG +EEA RVF+ + + + +WN +
Sbjct: 250 AGALARGREVHRWVERSGIEMDDKLATAVVDMYCKCGCVEEAWRVFEALPARGLTSWNCM 309
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
IGG A+HG GE+A+ +F M+ G+ PDDVTL+ VLTAC+HAG++ +G+ F + + Y
Sbjct: 310 IGGFAVHGRGEDALNLFGLMEREGVAPDDVTLVNVLTACAHAGMVSEGRHYFNYISQRYG 369
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
+ P ++HYGC+VDL RA L+EA +VI++MPMEP+ + G+L A D V+L E
Sbjct: 370 IVPKMEHYGCMVDLYGRAGQLEEAKKVIQDMPMEPDVGVLGALFGASKIHGD---VDLGE 426
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
R+I+L+P N G YVL++N+ A +W+D ++RRLM ERN+ K G SVIE+ V
Sbjct: 427 AIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQGEV 486
Query: 483 HEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
EF G HP +EE+Y+M + +R E Y
Sbjct: 487 CEFQCGGLCHPQAEEVYAMARDMMRKIRAEGY 518
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/500 (34%), Positives = 280/500 (56%), Gaps = 21/500 (4%)
Query: 28 TKSHHHLP-------LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ 80
TK H LP LLQ L QVHA II + + S + L KL+ +
Sbjct: 3 TKQPHKLPHSPAYNFLLQAGPRLYLLHQVHAHIIVSGYGR---SRSLLTKLLNLACAAGS 59
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEA-GLGHRGIQLYTQMIGNGLDPDSFTYPILLK 139
I+Y +F + NP +F F ++I+ +++ + Y++M+ + + P ++T+ ++K
Sbjct: 60 ISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIK 119
Query: 140 ACGDLRQVKGVHSLVVKSK----DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
+C DL +K H VV F ++ L+ Y GD+ +A+ +FD++ E+++
Sbjct: 120 SCADLSALK--HGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSI 177
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V W +MI+G+ + +E I LF +M+++GVE + T VSVLSACA+LGA LG WVHE+
Sbjct: 178 VAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEY 237
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
+ N + LN LG +L +MY +CG + +A VF + E+NV W ++I G +G G +A
Sbjct: 238 IVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQA 297
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
V++F +M+ +G+ P+ +T +AVL+AC+HAGL+ +G+ +F ++R +Y + P V+H CLVD
Sbjct: 298 VELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVD 357
Query: 376 LLCRARLLDEAYEVIR-NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
+L RA LLDEAY I+ +P P + ++L AC N +L E L+ EP
Sbjct: 358 MLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHK---NFDLGAQVAEHLLAAEPE 414
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
N +YV++SNIYA + D +R M + + K G S +E++ + F +GD H
Sbjct: 415 NPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVGYSTVEVDQKTYLFSMGDKSHSE 474
Query: 495 SEEIYSMLEYVAISLREECY 514
+ IY L+ + E Y
Sbjct: 475 TNAIYHYLDELMWKCSEAGY 494
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/502 (34%), Positives = 273/502 (54%), Gaps = 17/502 (3%)
Query: 14 FTNSANSHKNSNTATKSHHHLPLLQKC---THLVQFKQVHAQIIKASFDNRTISDTQLAK 70
F++ S N+A ++ LLQ C + L KQ+H+ +I+A + +T +
Sbjct: 176 FSDMQASGIRPNSAV----YMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICN 231
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+ V + A LVF+ + + + ++ GY +A ++L+ +M G++ D
Sbjct: 232 M---YVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELD 288
Query: 131 SFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
F + I+LK C L + +HS +VK S + T L+ FY GD++SA F
Sbjct: 289 EFVFSIVLKVCCGLEDWDMGRQIHSHIVK-LGAESEVSVGTPLVDFYVKCGDIESAYRSF 347
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+++E N V+W+A+I+G + + I +F +R GV +N SV ACA
Sbjct: 348 GRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLN 407
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
+G H K ++ +A+ MY+KCG ++ A R F+ + E + W +II G A
Sbjct: 408 MGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYA 467
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
HG EA+ F +MQ G++P+ VT IAVLTACSH+GL+ + K+ +M RDY V+P +
Sbjct: 468 YHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTI 527
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
HY C++D RA LL EA E+I MP EP+A+ W SLL C + D ++L +IA E
Sbjct: 528 DHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCD---LKLGKIAAEN 584
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L +L+P + Y+L+ N+Y+A +W++AG +R+LM ER + K CS I + VH F+V
Sbjct: 585 LFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVV 644
Query: 488 GDGRHPCSEEIYSMLEYVAISL 509
GD HP +E IYS LE S+
Sbjct: 645 GDRHHPQTEAIYSKLEEFKCSV 666
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 165/329 (50%), Gaps = 10/329 (3%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GD 143
VF++++ + ++ VI YA+ G + I+L++ M +G+ P+S Y LL++C
Sbjct: 144 VFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSF 203
Query: 144 LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
L K +HS V++++ N+ I T + Y G ++ A+L+FD M +N VTWT ++
Sbjct: 204 LELGKQIHSHVIRAQ-LNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMV 262
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
G+ + K ++LF +M GVE++E VL C L ++G+ +H + K
Sbjct: 263 GYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAES 322
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+G L D Y KCG IE A R F + E N +W+++I G + G E+ +K+F ++
Sbjct: 323 EVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLR 382
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG--CLVDLLCRAR 381
G+ + +V AC+ + G + + + V YG +V + +
Sbjct: 383 SEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVS---YLYGESAMVTMYSKCG 439
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
LD A ++ EP+AV W ++++ A
Sbjct: 440 RLDYARRAFESID-EPDAVAWTAIISGYA 467
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 138/280 (49%), Gaps = 8/280 (2%)
Query: 133 TYPILLKACGDLRQV---KGVHSLVVKS-KDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
+Y L +ACG LR + + +H + ++ K+ + I + L+ YC+ G Q +FD
Sbjct: 89 SYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENC--LLRMYCDCGSCIDVQKVFD 146
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
+M KN+V+W +I+ + K + I LF M+ SG+ N +S+L +C EL
Sbjct: 147 EMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLEL 206
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
GK +H V + + N + A+ +MY +CG++E A VF + +N TW ++ G
Sbjct: 207 GKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQ 266
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
E A+++F +M M G++ D+ VL C + G++I ++ + E V
Sbjct: 267 AKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVK-LGAESEVS 325
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
LVD + ++ AY + EPN V W +L++
Sbjct: 326 VGTPLVDFYVKCGDIESAYRSFGRIS-EPNDVSWSALISG 364
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 5/230 (2%)
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
KQ +E D ++M D+ V V + + AC L + G+ +H+ + + +
Sbjct: 64 KQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGS 123
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+ L MY CG + +VF +L KN+ +W +I A +G E+A+++F MQ SG
Sbjct: 124 IENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASG 183
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
I+P+ +++L +C +E GK+I ++ R ++ N+ + ++ R L+ A
Sbjct: 184 IRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIR-AQLNANITVETAICNMYVRCGWLEGA 242
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADD-GANVEL-AEIAMERLIKLEPF 434
V M + NAV W L+ A +EL A +AME ++L+ F
Sbjct: 243 KLVFDGMDAQ-NAVTWTGLMVGYTQAKKLEVALELFARMAMEG-VELDEF 290
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/463 (35%), Positives = 268/463 (57%), Gaps = 14/463 (3%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ-IAYAHLVFNQIINPSTFAFNTVI 103
Q QVH +K+ FD D + I L + + A+LVF ++ + ++N +I
Sbjct: 371 QGLQVHCLAVKSGFD----VDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAII 426
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSV 163
+ I +M+ +G++PD FTY +LKAC L+ ++ + LVV K S
Sbjct: 427 AALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLE--YGLVVHGKAIKSG 484
Query: 164 I----HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
+ + ++ YC G + AQ L D++ + +V+W ++I+G K E F
Sbjct: 485 LGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFS 544
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
+M D GV+ + T +VL CANL ELGK +H + K ++ ++ + + L DMYAKCG
Sbjct: 545 EMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCG 604
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
+ ++L +F+ + + +WN++I G A+HG G EA++MF +MQ + + P+ T +AVL
Sbjct: 605 NMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLR 664
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSH GL++ G + F+ M YK+ P ++H+ C+VD+L R++ EA E IR+MP+E +A
Sbjct: 665 ACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADA 724
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
V+W +LL+ C D VE+AE A +++L+P + Y+L+SN+YA +W D + R
Sbjct: 725 VVWKTLLSICKIRQD---VEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTR 781
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
RLM++ + K PGCS IE+ +H F+VGD HP S+E+Y ML
Sbjct: 782 RLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEML 824
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 179/356 (50%), Gaps = 9/356 (2%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD DT ++ + V++ A +F + +P ++NT+I GY + G+ +
Sbjct: 77 FDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSV 136
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITF 173
L +M G+ D T +LLK+CG L + +H+L VK+ + + + + L+
Sbjct: 137 GLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTG-LETDVRAGSALVDM 195
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y + A F M E+N V+W A I G V+ + Y G++LF +M+ G+ V++
Sbjct: 196 YGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAY 255
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
S +CA + + +H KN + +G A+ D+YAK G + +A R F +
Sbjct: 256 ASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPH 315
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
NV T N+++ GL G G EA+++F M SG+ D ++L V +AC+ +G ++
Sbjct: 316 HNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQV 375
Query: 354 F-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
++ + V+ V++ ++DL + + L EAY V + M + ++V W +++ A
Sbjct: 376 HCLAVKSGFDVDVCVRN--AILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAA 428
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 190/446 (42%), Gaps = 58/446 (13%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL+ C L Q+HA +K + + + L++ + A F+ +
Sbjct: 157 LLKSCGGLDDLALGVQIHALAVKTGLETDVRAGS---ALVDMYGKCRSLDDALRFFHGMG 213
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKG 149
++ ++ I G + RG++L+ QM GL Y ++C L +
Sbjct: 214 ERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQ 273
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H+ +K+ F+S T ++ Y G++ A+ F + NV T AM+ G V+
Sbjct: 274 LHAHAIKNV-FSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTG 332
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E + LF+ M SGV + ++L V SACA + G VH K+ ++ +
Sbjct: 333 LGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRN 392
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
A+ D+Y KC + EA VF+ + +++ +WN+II L + C E+ + +M SG++P
Sbjct: 393 AILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEP 452
Query: 330 DDVTLIAVLTACS-----HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
DD T +VL AC+ GL+ GK I + D V V VD+ C+ +
Sbjct: 453 DDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTV------VDMYCKCGAIT 506
Query: 385 EA----------------------------------YEVIRNMPMEPNAVLWGSLLTACA 410
EA + + +M ++P+ + ++L CA
Sbjct: 507 EAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCA 566
Query: 411 SADDGANVELAEIAMERLIKLEPFND 436
+ A +EL + ++IK E D
Sbjct: 567 NL---ATIELGKQIHGQIIKQEMLGD 589
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 16/246 (6%)
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKGVHSLVVKSKDFNSVIH----SL 167
G + +M+ +G P +F LL+ CG GV F+++ H S
Sbjct: 38 GQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGV---------FDTMPHRDTVSW 88
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
++T Y + GD +A LF M + +VV+W +I+G+ + +R + L +M GV
Sbjct: 89 NTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVA 148
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
++ TL +L +C L LG +H K + + + G+AL DMY KC +++ALR
Sbjct: 149 LDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRF 208
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
F + E+N +W + I G + +++F QMQ G+ + +C+ +
Sbjct: 209 FHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCL 268
Query: 348 EKGKEI 353
+++
Sbjct: 269 STARQL 274
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y G + A +F + + +V +WN++I G HG +V + +M G+ D TL
Sbjct: 95 YVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTL 154
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+L +C + G +I + + +E +V+ LVD+ + R LD+A M
Sbjct: 155 AVLLKSCGGLDDLALGVQI-HALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMG 213
Query: 395 MEPNAVLWGSLLTAC 409
E N+V WG+ + C
Sbjct: 214 -ERNSVSWGAAIAGC 227
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/446 (35%), Positives = 261/446 (58%), Gaps = 10/446 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I + ++ A +F ++ FA+ ++ G+ + G+ +++ +M + +
Sbjct: 252 MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP----EKN 307
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
++ ++ +Q++ L + N+ S ++T Y G++ A++LFD+M
Sbjct: 308 EVSWNAMIAGYVQSQQIEKARELFDQMPSRNT--SSWNTMVTGYAQCGNIDQAKILFDEM 365
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
+++ ++W AMI+G+ + E + LF KM+ G +N L LS+CA + A ELGK
Sbjct: 366 PQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGK 425
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
+H + K G AL MY KCG IEEA VF+ + EK++ +WN++I G A HG
Sbjct: 426 QLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHG 485
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
G+EA+ +F M+M+ IKPDDVTL+ VL+ACSH GL++KG E F +M ++Y + N KHY
Sbjct: 486 FGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHY 544
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
C++DLL RA LDEA ++++MP P+A WG+LL A D EL E A E++ +
Sbjct: 545 TCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGD---TELGEKAAEKVFE 601
Query: 431 LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
+EP N G YVL+SN+YAA +W + +MR M+++ + K PG S +EI + H F VGD
Sbjct: 602 MEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDC 661
Query: 491 RHPCSEEIYSMLEYVAISLREECYAA 516
HP +E IY+ LE + + L+++ + +
Sbjct: 662 SHPEAERIYAYLEELDLELKKDGFVS 687
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 164/368 (44%), Gaps = 41/368 (11%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI------G 124
++ V + ++ A +FNQ+ ++N ++ G+A+ G +++ QM+
Sbjct: 128 MLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISW 187
Query: 125 NGL---------------------DPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSV 163
NGL D + ++ L+ +++ SL + + +
Sbjct: 188 NGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKI 247
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
S +IT Y G + A+ LF+++ ++V WTAM++G V+ E +F +M
Sbjct: 248 --SWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM-- 303
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWV-HEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
E NE++ ++++ E + + + ++N N + YA+CG I+
Sbjct: 304 --PEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWN-----TMVTGYAQCGNID 356
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+A +F + +++ +W ++I G A G EEA+ +F +M+ G + L L++C+
Sbjct: 357 QAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCA 416
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
+E GK++ + + + L+ + + ++EA++V ++ E + V W
Sbjct: 417 EIAALELGKQLHGRLVK-AGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDIT-EKDIVSW 474
Query: 403 GSLLTACA 410
+++ A
Sbjct: 475 NTMIAGYA 482
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 167/406 (41%), Gaps = 81/406 (19%)
Query: 52 QIIKASFDNRTISDTQLAKL---IESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE 108
Q +++ + TI D+ + K I + + Q A VFN + ST +N +I GY
Sbjct: 44 QKLESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGY-- 101
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLT 168
L + ++ D D ++ ++L
Sbjct: 102 --LSNNKFDCARKVFEKMPDRDLISWNVMLSG---------------------------- 131
Query: 169 RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV 228
Y G++ +A+ LF+QM EK+VV+W AM++G + E RK+ D +
Sbjct: 132 -----YVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEA----RKIFDQMLVK 182
Query: 229 NELTLVSVLSACANLGASELGKWVH------EFVNKNCII-------------------- 262
NE++ +LSA G E + + E V+ NC++
Sbjct: 183 NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP 242
Query: 263 LNDKLG-AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
+ DK+ + YA+ G + EA R+F+ + ++V W +++ G +G +EA ++F +
Sbjct: 243 VRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEE 302
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
M + ++V+ A++ + IEK +E+F D N + +V +
Sbjct: 303 MP----EKNEVSWNAMIAGYVQSQQIEKARELF-----DQMPSRNTSSWNTMVTGYAQCG 353
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+D+A + MP + + + W ++++ A + I M+R
Sbjct: 354 NIDQAKILFDEMP-QRDCISWAAMISGYAQSGQSEEALHLFIKMKR 398
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 137/301 (45%), Gaps = 28/301 (9%)
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
+I+ Y + A+ +F++M ++++++W M++G+VK N LF +M + V
Sbjct: 97 MISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV--- 153
Query: 230 ELTLVSVLSACANLG-ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
++ ++LS A G E K + + KN I N L A Y + G IE+A R+F
Sbjct: 154 -VSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSA-----YVQNGRIEDARRLF 207
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
++ + +WN ++GG ++A +F +M + D ++ ++T + GL+
Sbjct: 208 DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR----DKISWNIMITGYAQNGLLS 263
Query: 349 KGKEIFYNMR-RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
+ + +F + RD V + +V + +LDEA + MP E N V W +++
Sbjct: 264 EARRLFEELPIRD------VFAWTAMVSGFVQNGMLDEATRIFEEMP-EKNEVSWNAMIA 316
Query: 408 ACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
+ + E A E ++ N ++ M YA D A + M +R+
Sbjct: 317 GYVQS------QQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDC 370
Query: 468 V 468
+
Sbjct: 371 I 371
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 109/289 (37%), Gaps = 65/289 (22%)
Query: 37 LQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L C + KQ+H +++KA F I+ L + I A VF I
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYG---KCGSIEEAFDVFEDITE 468
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-KGV-- 150
++NT+I GYA G G + L+ M + PD T +L AC V KG+
Sbjct: 469 KDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEY 527
Query: 151 -------HSLVVKSKDFNSVIHSLTRL------------ITFYCN-------------FG 178
+ + +K + +I L R + FY + G
Sbjct: 528 FNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHG 587
Query: 179 DV----KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG--------- 225
D K+A+ +F +M N + + N + +RE ++ KMRD G
Sbjct: 588 DTELGEKAAEKVF-EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSW 646
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHE---------FVNKNCIILND 265
VE+ T + + C++ A + ++ E FV+ ++L+D
Sbjct: 647 VEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHD 695
>gi|334187520|ref|NP_001190262.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
gi|223635618|sp|P0C8Q7.1|PP369_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08305
gi|332003897|gb|AED91280.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
Length = 534
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/504 (34%), Positives = 288/504 (57%), Gaps = 41/504 (8%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L +C + + ++H +I +Q +L +S + YA+ +++ +P
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSF-SALSSSGDVDYAYKFLSKLSDPP 72
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL--RQVKG-VHS 152
+ +N VIRG++ + + I +Y QM+ GL PD TYP L+K+ L R++ G +H
Sbjct: 73 NYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHC 132
Query: 153 LVVKS--------------------------KDFNSVIH----SLTRLITFYCNFGDVKS 182
VVKS K F+ + H + ++ Y GDV S
Sbjct: 133 SVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVS 192
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACA 241
A+L+FD+M+E++VVTW++MI+G+VK+ Y + +++F +M R + NE+T+VSV+ ACA
Sbjct: 193 ARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACA 252
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF--KIVLEKNVCTW 299
+LGA GK VH ++ + L L +L DMYAKCG I +A VF V E + W
Sbjct: 253 HLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMW 312
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N+IIGGLA HG E++++F +M+ S I PD++T + +L ACSH GL+++ F +++
Sbjct: 313 NAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK- 371
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
+ EP +HY C+VD+L RA L+ +A++ I MP++P + G+LL C + N+E
Sbjct: 372 ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCI---NHGNLE 428
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
LAE ++LI+L+P NDG YV ++N+YA Q+ A MR M+++ + K G S+++++
Sbjct: 429 LAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLD 488
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLE 503
H F+ D H S++IY++L+
Sbjct: 489 GTRHRFIAHDKTHFHSDKIYAVLQ 512
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/507 (34%), Positives = 275/507 (54%), Gaps = 47/507 (9%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAY-AHLVFNQIINPSTFAFNTVIRG 105
K+VH I+ F SD L + + + + A LVF + ++ ++
Sbjct: 98 KRVHEDAIRFGF----CSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASC 153
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFNS 162
Y GL + + +M NG P+S T +L AC DL+ +K VH VV++ +
Sbjct: 154 YVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGN 213
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF---- 218
V S + L+ Y + ++ AQL+FD M+ ++ V+W +I + K +G+ +F
Sbjct: 214 VFVS-SALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMM 272
Query: 219 -------------------------------RKMRDSGVEVNELTLVSVLSACANLGASE 247
+M++SG + N++T+ SVL AC NL +
Sbjct: 273 SEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLR 332
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
GK +H ++ ++ + AL MYAKCG +E + RVF ++ +++ +WN++I +
Sbjct: 333 GGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATS 392
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
+HG GEEA+ +F +M SG++P+ VT VL+ CSH+ L+++G IF +M RD+ VEP+
Sbjct: 393 MHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDA 452
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
H+ C+VD+L RA L+EAYE I+ MP+EP A WG+LL C NVEL IA R
Sbjct: 453 DHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVY---KNVELGRIAANR 509
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L ++E N GNYVL+SNI + W +A + R+LM++R + KNPGCS I++ + VH F+V
Sbjct: 510 LFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHTFVV 569
Query: 488 GDGRHPCSEEIYSMLEYVAISLREECY 514
GD + S+EIY L+Y+ +R Y
Sbjct: 570 GDKSNDQSDEIYRFLDYMGEKMRIAGY 596
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 178/385 (46%), Gaps = 42/385 (10%)
Query: 70 KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLD 128
K I+ NS + A +F++I P + +I + G IQ Y N ++
Sbjct: 16 KFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVE 75
Query: 129 PDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL 185
PD + KAC LR V K VH ++ F S + LI Y + A+L
Sbjct: 76 PDKLLLLSVAKACASLRDVMNAKRVHEDAIRF-GFCSDVLLGNALIDMYGKCRCSEGARL 134
Query: 186 LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA 245
+F+ M ++V++WT+M + +V RE + FRKM +G N +T+ S+L AC +L
Sbjct: 135 VFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKD 194
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK----------- 294
+ G+ VH FV +N + N + +AL +MYA C I +A VF + +
Sbjct: 195 LKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITA 254
Query: 295 ------------------------NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
N +WN++IGG +G E+A+++ +MQ SG KP+
Sbjct: 255 YFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPN 314
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+T+ +VL AC++ + GK+I + R + + ++ LV + + L+ + V
Sbjct: 315 QITITSVLPACTNLESLRGGKQIHGYIFRHWFFQ-DLTTTTALVFMYAKCGDLELSRRVF 373
Query: 391 RNMPMEPNAVLWGSLLTACASADDG 415
+M + + V W +++ A + +G
Sbjct: 374 -SMMTKRDTVSWNTMIIATSMHGNG 397
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 123/245 (50%), Gaps = 3/245 (1%)
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
H + I Y N GD++ A+ LFD++ + ++ TWT +I+ K E I + R
Sbjct: 12 HLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHK 71
Query: 225 G-VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
VE ++L L+SV ACA+L K VHE + + LG AL DMY KC E
Sbjct: 72 NCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEG 131
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A VF+ + ++V +W S+ G EA+ F +M ++G +P+ VT+ ++L AC+
Sbjct: 132 ARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTD 191
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
++ G+E+ + R+ + NV LV++ + +A V +M + V W
Sbjct: 192 LKDLKSGREVHGFVVRN-GMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRR-DTVSWN 249
Query: 404 SLLTA 408
L+TA
Sbjct: 250 VLITA 254
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 283/554 (51%), Gaps = 88/554 (15%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
H L + +++HAQ++K ++ A+L+ + + + VF+
Sbjct: 353 QHLASLPRGLPRAAHVRELHAQVLKQGLH---LNPRAAARLVSAYALLRLLPSSRRVFDA 409
Query: 91 IINPSTFAF--NTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA--CGDLRQ 146
I +P AF NT++R YA G + ++ M DSFTY L+KA +
Sbjct: 410 IRDPHADAFLANTMLRAYALGGAPRDALAAFSAMPRR----DSFTYSFLIKALSAAGVAP 465
Query: 147 VKGVHSLVVKSKDF------NSVIHSLTRLITF------------------------YCN 176
V+ VHS VVK N++I + ++ F
Sbjct: 466 VRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVR 525
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK---------------- 220
G++ A+ LFD+M EK+ V+W +++G+ K +LF++
Sbjct: 526 EGELAGARKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGY 585
Query: 221 ---------------------------MRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
M+++ VE++ +VS+L+ACA G+ LGK +H
Sbjct: 586 CKKGDLEMARVIFDKMPGKNLVTWTIMMKEASVELDVAAVVSILAACAESGSLSLGKRIH 645
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI-VLEKNVCTWNSIIGGLAIHGCG 312
+V K + + + AL DM+ KCG + A VF ++K+ +WNSIIGG A+HG G
Sbjct: 646 RYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHG 705
Query: 313 EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC 372
++A+++F QM+ G PD VT+I VL+AC+H G +++G+ F NM RDY + P ++HYGC
Sbjct: 706 DKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGC 765
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLE 432
++DLL R L+ EA ++I++MP EPN V+WGSLL+AC NVE AEIA+ L KL+
Sbjct: 766 MIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHK---NVEYAEIAVNELSKLQ 822
Query: 433 PFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRH 492
P N GNY ++SNIYA QW D K R MK K G S +E+N+ HEF VGD +H
Sbjct: 823 PSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKH 882
Query: 493 PCSEEIYSMLEYVA 506
S++I M++ ++
Sbjct: 883 QDSDQISEMVDRLS 896
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 272/497 (54%), Gaps = 38/497 (7%)
Query: 54 IKASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLG 112
++ +FD + D +I L ++ A L+ Q ++ ++I Y+ A
Sbjct: 162 VRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRA 221
Query: 113 HRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLV--------------- 154
+ + M+ G+ PD T +L AC L+ ++ +HSLV
Sbjct: 222 KEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVAL 281
Query: 155 ----VKSKDFN---SVIHSLTR---------LITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
K DF V ++ R +I YC G V A+ LFDQM ++++T+
Sbjct: 282 IDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITF 341
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
+MI G++ RE + LF MR + V+ T+VS+LSACA+LGA G+ +H +
Sbjct: 342 NSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIEL 401
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+ + +G AL DMY KCG + EA VF+ + +++V W ++I GLA +G G+ ++
Sbjct: 402 RLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEY 461
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
F+QM+ G +P+ V+ IAVLTACSH+ L+ +G+ F MR Y + P ++HYGC++DLL
Sbjct: 462 FYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLG 521
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGN 438
R+ LLDEA ++++ MPM+PN+V+W S+L+AC ++LA+ A E L+K+EP D
Sbjct: 522 RSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHK---RIDLAQCAAEHLLKIEPDEDAV 578
Query: 439 YVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
YV + NI +W+DA K+R LM+ER + K G S + + VH+F+V D HP EI
Sbjct: 579 YVQLYNICIDSRKWEDASKIRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEI 638
Query: 499 YSMLEYVAISLREECYA 515
+MLE ++ L+ Y+
Sbjct: 639 IAMLEEISHRLKSAGYS 655
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 214/444 (48%), Gaps = 15/444 (3%)
Query: 43 LVQFKQVHAQIIKASF--DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFN 100
L Q +Q+H ++KA + N +S++ L L ++ +S A N I++ ++N
Sbjct: 911 LEQGRQLHGVVLKAGWIPSNIFLSNS-LVDLYSAIGDSVDTVKA---LNDILSEDVISWN 966
Query: 101 TVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK---ACGDLRQVKGVHSLVVKS 157
+++ YA+ G + QM+ +G P ++ LL GD + +H +V K
Sbjct: 967 SILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKL 1026
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
S +H T LI Y + +F+++ + ++I ++ + +++
Sbjct: 1027 GFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLRCNMFDAALEI 1086
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELG--KWVHEFVNKNCIILNDKLGAALTDMY 275
M GV +++T + + A + + L + +H + K ++ + ++L Y
Sbjct: 1087 LHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAY 1146
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
A G + + +F+ +L+ NV + +II A +G G A+++F QM SG+KPD+VT +
Sbjct: 1147 ACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFL 1206
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
+ C AG+ E+G+ + MR +++P+ +H+ C+V+LL R + EA E++ P+
Sbjct: 1207 CAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPL 1266
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
W SLL +C + G NV L + A LI + + + +SN + + A
Sbjct: 1267 RHYTKAWSSLLQSCKA--HGENV-LGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETA 1323
Query: 456 GKMRRLMKERNIVKNPGCSVIEIN 479
+++ + + VK G S+IE++
Sbjct: 1324 LRIKEMTNVKE-VKKSGHSLIEVS 1346
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 164/367 (44%), Gaps = 55/367 (14%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVN------SSQIAYAHLVFNQIINPSTFA 98
Q ++HA + + R + L+ SLVN + YA +F+++ STF
Sbjct: 14 QAAELHAHLTTS---GRLLHPPSAHHLLNSLVNCLPPSDPLHLRYALHLFDRM-PASTFL 69
Query: 99 FNTVIRGYAEAGL--GHRGIQ--LYTQMIGNGLDPDSFTYPILLKACGDLRQ----VKGV 150
F+T +R AG G I L+ +M + PD FT+ L K R +
Sbjct: 70 FDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALLCTML 129
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMING------ 204
H+ +++ ++ LI Y G + FD++ K+ V+WT +I+G
Sbjct: 130 HAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGM 189
Query: 205 -------------------------HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
+ + +E +D F+ M G+ +++T++ VLSA
Sbjct: 190 LSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSA 249
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE-KNVCT 298
C+ L ELG +H V + + +++ L AL DMYAKCG A VF V + +
Sbjct: 250 CSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQS 309
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
WN+II G HG + A +F QM++ I +T +++T H+G + + +F NMR
Sbjct: 310 WNAIIDGYCKHGHVDVARSLFDQMEVRDI----ITFNSMITGYIHSGQLREALLLFMNMR 365
Query: 359 R-DYKVE 364
R D +V+
Sbjct: 366 RHDLRVD 372
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 162/353 (45%), Gaps = 39/353 (11%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GD 143
+F ++ +T N V+RG L I + M L+ + +Y +K C G+
Sbjct: 850 LFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGE 909
Query: 144 -LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD-VKSAQLLFDQMTEKNVVTWTAM 201
L Q + +H +V+K+ S I L+ Y GD V + + L D ++E +V++W ++
Sbjct: 910 WLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSE-DVISWNSI 968
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK--- 258
++ + + + +E + ++M G + + VS+L+ G +LG +H V+K
Sbjct: 969 LSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGF 1028
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+C ++ + L DMY KC + +L +F + + NS+I + A+++
Sbjct: 1029 SCSSVH--VQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLRCNMFDAALEI 1086
Query: 319 FWQMQMSGIKPDDVTLIAV-----------LTACS--HAGLIEKGKEIFYNMRRDYKVEP 365
M + G+ PDDVT A LT+C H+ L++ G E+ D V
Sbjct: 1087 LHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEM------DMAVCS 1140
Query: 366 N-VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ + Y C A L ++ + + ++PN + + ++++ACA DGA
Sbjct: 1141 SLITAYAC-------AGQLSSSHLIFEGL-LDPNVICFTAIISACARYGDGAR 1185
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/491 (34%), Positives = 283/491 (57%), Gaps = 22/491 (4%)
Query: 40 CTHLVQFKQV---HAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
C +L + + H ++ K DN + ++ + A VF++I
Sbjct: 127 CANLEEIRMARLAHCEVFKLGLDN---DHHTVNSMVTMYFRCGENGVARKVFDEITEKDL 183
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKACGDL------RQVKG 149
++N+++ GYA+ G ++++ ++ +G +PD + +L ACG+L R V+G
Sbjct: 184 VSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEG 243
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+V + NS I S LI+ Y G++ S++ +FD M ++ +TW A I+ + +
Sbjct: 244 F--VVERGMKVNSYIGS--ALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNG 299
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E I LF M+++GV+ N++TL +VLSACA++GA +LGK + E+ + + +
Sbjct: 300 MADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVAT 359
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG--I 327
AL DMYAKCG +E A RVF + KN +WN++I LA HG +EA+ +F +M G
Sbjct: 360 ALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSA 419
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
+P+D+T +++L+AC HAGL+++G +F M + + P ++HY C+VDLL RA L EA+
Sbjct: 420 RPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAW 479
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
+VI MP +P+ V G+L +AC NV++ E ++ L++L+P N GNY++ S IY
Sbjct: 480 DVIEKMPEKPDNVTLGALHSACQRK---KNVDIGERVIQMLLELDPSNSGNYIISSKIYE 536
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
WDDA +MR LM+E + K PGCS IE+ + + EF+ GDG S ++ ++++ +
Sbjct: 537 NLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGLTLDSIDVRNIIDLLYE 596
Query: 508 SLREECYAARM 518
L++E Y ++
Sbjct: 597 ELKKEGYVPKI 607
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 214/388 (55%), Gaps = 24/388 (6%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII- 92
L LL++C +Q+H Q S L+ ++ Y+ L+F+ I
Sbjct: 25 LSLLKQCPSTKTLQQIHTQFTIHSIHKPN-------HLLSQSISLKDFTYSTLIFSHITP 77
Query: 93 NPSTFAFNTVIRGYAEAGLGHR-GIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG-- 149
+P+ +AFN ++R + + LY QM + P++FT+P + AC +L +++
Sbjct: 78 HPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMAR 137
Query: 150 -VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
H V K ++ H++ ++T Y G+ A+ +FD++TEK++V+W ++++G+ K
Sbjct: 138 LAHCEVFK-LGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKL 196
Query: 209 KNYREGIDLFRKMR-DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
RE +++F ++R +SG E +E++LVSVL AC LG ELG+WV FV + + +N +
Sbjct: 197 GFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYI 256
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
G+AL MY+KCG + + R+F + ++ TWN+ I A +G +EA+ +F M+ +G+
Sbjct: 257 GSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGV 316
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH----YGCLVDLLCRARLL 383
P+ VTL AVL+AC+ G ++ GK++ +Y ++H L+D+ + L
Sbjct: 317 DPNKVTLTAVLSACASIGALDLGKQM-----DEYATHRGLQHDIFVATALIDMYAKCGSL 371
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACAS 411
+ A V +MP + +A W ++++A AS
Sbjct: 372 ESAQRVFNDMPRKNDAS-WNAMISALAS 398
>gi|218200771|gb|EEC83198.1| hypothetical protein OsI_28453 [Oryza sativa Indica Group]
Length = 639
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/430 (39%), Positives = 241/430 (56%), Gaps = 40/430 (9%)
Query: 86 LVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR 145
LV + + S N +IR A + H + LY ++ G P T P LLK+
Sbjct: 28 LVTSGWLRRSADLHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSP 87
Query: 146 QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
V G L + H++ + + GD
Sbjct: 88 AVPGARGLALGVH-----AHAVKLGLAGFLLAGD-------------------------- 116
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
RE + LF +M+ GV ++ LV VL ACA LG E GKWVH ++ N I +
Sbjct: 117 -----GREALGLFARMQADGVIPDDTVLVGVLVACAQLGVLEQGKWVHGYLKANNIRITV 171
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
LG AL DMYAKCG ++ A+ VFK++ EKNV W ++I GLA+HG G EA+++F QM+
Sbjct: 172 FLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERL 231
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G+KPDD+ I L AC+H GL++KG+E+F +M R Y ++P ++HYGC+VDLL R LL+E
Sbjct: 232 GVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNE 291
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
A E++ MPM+P+A++WG+L+ C NVELAE ++ I+LEP G YVL+ NI
Sbjct: 292 AREMVEKMPMKPDALIWGALMAGCRFHK---NVELAEYVVKHWIELEPDKSGAYVLLGNI 348
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
YAA + A ++R LM+E+ + K PGCS +EI V+H+F+VGD HP EEI S + +
Sbjct: 349 YAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKWDEI 408
Query: 506 AISLR-EECY 514
+R EE Y
Sbjct: 409 DSRIRLEEGY 418
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 7/172 (4%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
L Q K VH + +N I+ L++ ++ A VF + + A+ T+
Sbjct: 152 LEQGKWVHGYL---KANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTM 208
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKD 159
I+G A G G ++L++QM G+ PD + L AC G + + + + +V+
Sbjct: 209 IKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYG 268
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK-NVVTWTAMINGHVKQKN 210
I ++ G + A+ + ++M K + + W A++ G KN
Sbjct: 269 IKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKN 320
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/485 (35%), Positives = 278/485 (57%), Gaps = 11/485 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP + K +L KQ+H I++ S ++ + LI++ ++ A +F+Q +
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSI---SLDIFLTSALIDAYFKCRGVSMAQNIFSQCNS 403
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GV 150
F +I GY GL ++++ ++ + P+ T +L G L +K +
Sbjct: 404 VDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGREL 463
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H ++K K F++ + +I Y G + A +F++++++++V+W +MI + N
Sbjct: 464 HGFIIK-KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
ID+FR+M SG+ + +++ + LSACANL + GK +H F+ K+ + + +
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSEST 582
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIKP 329
L DMYAKCG ++ A+ VFK + EKN+ +WNSII HG ++++ +F +M + SGI+P
Sbjct: 583 LIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRP 642
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D +T + ++++C H G +++G F +M DY ++P +HY C+VDL RA L EAYE
Sbjct: 643 DQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYET 702
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
+++MP P+A +WG+LL AC NVELAE+A +L+ L+P N G YVL+SN +A
Sbjct: 703 VKSMPFPPDAGVWGTLLGACRLHK---NVELAEVASSKLMDLDPSNSGYYVLISNAHANA 759
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+W+ K+R LMKER + K PG S IEIN H F+ GD HP S IYS+L + L
Sbjct: 760 REWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGEL 819
Query: 510 REECY 514
R E Y
Sbjct: 820 RLEGY 824
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 183/387 (47%), Gaps = 31/387 (8%)
Query: 36 LLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKLIE---SLVNSSQIAYAHLVFN 89
LLQ C++ L Q KQVHA +I S + +D ++ + S + ++ Y +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG 149
I P +N++I + GL ++ + Y +M+ G+ PD T+P L+KAC L+ KG
Sbjct: 101 SSIRP----WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 150 VHSL--VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ L V S + + LI Y +G + LFD++ +K+ V W M+NG+ K
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
I F MR + N +T VLS CA+ +LG +H V + + +
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
+L MY+KCG ++A ++F+++ + TWN +I G G EE++ F++M SG+
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
PD +T ++L + S +E K+I Y MR +D+ + L+D A
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSIS-----------LDIFLTSALID-A 384
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASAD 413
Y R + M N + + C S D
Sbjct: 385 YFKCRGVSMAQN------IFSQCNSVD 405
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 188/385 (48%), Gaps = 12/385 (3%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L++ C L FK + S ++ + LI++ + +I +F++++
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK-GV--HS 152
+N ++ GYA+ G I+ ++ M + + P++ T+ +L C + GV H
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263
Query: 153 LVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
LVV S DF I + L++ Y G A LF M+ + VTW MI+G+V+
Sbjct: 264 LVVVSGVDFEGSIKN--SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLM 321
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
E + F +M SGV + +T S+L + + E K +H ++ ++ I L+ L +AL
Sbjct: 322 EESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSAL 381
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
D Y KC + A +F +V + ++I G +G ++++MF + I P++
Sbjct: 382 IDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNE 441
Query: 332 VTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGC-LVDLLCRARLLDEAYEV 389
+TL+++L ++ G+E+ + +++ + N+ GC ++D+ + ++ AYE+
Sbjct: 442 ITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI---GCAVIDMYAKCGRMNLAYEI 498
Query: 390 IRNMPMEPNAVLWGSLLTACASADD 414
+ + + V W S++T CA +D+
Sbjct: 499 FERLS-KRDIVSWNSMITRCAQSDN 522
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 176/484 (36%), Positives = 271/484 (55%), Gaps = 59/484 (12%)
Query: 32 HHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
HHLP L HA K F T ++ I+ ++ ++ A VF+ +
Sbjct: 28 HHLPSL------------HAVCTKLGFLLCTRTNN---AFIQGYCSAGRVTDARRVFDGM 72
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVH 151
T +FN++I GYA +G +L+ ++ L P T+
Sbjct: 73 PRRDTVSFNSMIHGYAVSGDVGSAQRLFERV----LAPTPVTW----------------- 111
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
T ++ +C GDV+SA+ +F++M E+++V+W AMI+G V +
Sbjct: 112 ----------------TSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLP 155
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
E + LFR M + G N T+VSVLSAC GA E GKWVH FV K + ++ LG AL
Sbjct: 156 VEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTAL 215
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPD 330
DMYAKCG +E AL VF + +N CTWN++I GLA++G +A+ MF QM+++G + PD
Sbjct: 216 VDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPD 275
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+VT + VL ACSHAG ++ GKE FY + + Y VE ++HY C+VDLL R+ L EA+++I
Sbjct: 276 EVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLI 335
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
MPM+P+ V+W +LL C NV++AE + ++E G++VL+SN+YAA
Sbjct: 336 TEMPMKPDVVVWRALLGGCRLHK---NVKMAENVIS---EMEATCSGDHVLLSNLYAAVG 389
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+W+ +RR M+ + I K PGCS +E++ +HEF+ GD HP ++I++ L + ++
Sbjct: 390 RWNGVEDVRRTMRSKGIEKIPGCSSVEMDGSIHEFISGDKSHPSYDDIHAKLIEIGGRMQ 449
Query: 511 EECY 514
+ Y
Sbjct: 450 QHGY 453
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 182/517 (35%), Positives = 281/517 (54%), Gaps = 82/517 (15%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISD-TQLAKLI--ESLVNSSQIAYAHLVFNQII 92
L ++C L Q KQVHA ++ F +SD + L +LI S+ A+A LVF++I
Sbjct: 14 LWRRCRSLRQIKQVHALMVLRGF----LSDPSALRELIFASSVGVRGGTAHARLVFDRIP 69
Query: 93 NPSTFAFNTVIRGYAEA-----------------------------------------GL 111
+P F +NT+IRG A + G
Sbjct: 70 HPDRFMYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGA 129
Query: 112 GHRGIQLYTQMIGNGLDPDSFTYPILL---KACGDLRQVKGVHSLVVKSKD--FNSVIHS 166
G Q++ ++ G + D+F L+ CGDL + + ++++I
Sbjct: 130 SETGAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAMISG 189
Query: 167 LTR------------------------LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
R +IT Y GD+ A+ LFD +++VV+W AMI
Sbjct: 190 FARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMI 249
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC-- 260
+G+V+ ++++ ++LF +M+ G + + +T++S+LSACA+ G + G+ +H F++
Sbjct: 250 SGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLSGRFSR 309
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
I + LG AL DMYAKCG + AL VF ++ +KNV TWNSIIGGLA+HG EA+ +F
Sbjct: 310 IGPSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAIDVFQ 369
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M +KPD++T +AVL ACSH G+++KG E F M++ Y +EPNVKHYGC+VD+L RA
Sbjct: 370 KMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVDMLSRA 429
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
LL EA+E I M +EPN V+W +LL AC + +ELAE A + L+K G++V
Sbjct: 430 GLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGE---LELAEHANQELLKARSDASGDFV 486
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
L+SNIYA+ +W + MR+LM + + K GC+V++
Sbjct: 487 LLSNIYASVGEWLGSENMRKLMDDSGVNKEAGCAVVD 523
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 161/347 (46%), Gaps = 27/347 (7%)
Query: 135 PILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNF---GDVKSAQLLFDQMT 191
P L + C LRQ+K VH+L+V + F S +L LI F + G A+L+FD++
Sbjct: 12 PALWRRCRSLRQIKQVHALMVL-RGFLSDPSALRELI-FASSVGVRGGTAHARLVFDRIP 69
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMR------DSGVEVNELTLVSVLSACANLGA 245
+ + +I G R+ + ++ +M GV ++ T VL ACA +GA
Sbjct: 70 HPDRFMYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGA 129
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
SE G VH V K + + AL M+A CG + A +F ++ W+++I G
Sbjct: 130 SETGAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAMISG 189
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
A G A ++F S +K D V+ ++TA + G + +E+F D +
Sbjct: 190 FARRGDIGAARELF---DESPVK-DLVSWNVMITAYAKLGDMAPARELF-----DGAPDR 240
Query: 366 NVKHYGCLVDLLCRA---RLLDEAYEVIRNMPMEPNAVLWGSLLTACA-SADDGANVELA 421
+V + ++ R + E +E ++ M +P+ V SLL+ACA S D A L
Sbjct: 241 DVVSWNAMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLH 300
Query: 422 EIAMERLIKLEPFND-GNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
R ++ P GN ++ ++YA A ++ LM+++N+
Sbjct: 301 RFLSGRFSRIGPSTVLGNALI--DMYAKCGSMTSALEVFWLMQDKNV 345
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 179/504 (35%), Positives = 275/504 (54%), Gaps = 41/504 (8%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
L C +L Q KQ+H +++ D T+L + + L YA V + +
Sbjct: 56 LDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKL-GVPMDPYARRVIEPVQFRNP 114
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSL 153
F + VIRGYA G I +Y M + P SFT+ LLKACG DL + H+
Sbjct: 115 FLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQ 174
Query: 154 VVKSKDF------NSVIH------------------------SLTRLITFYCNFGDVKSA 183
+ + F N++I S T LI Y G+++ A
Sbjct: 175 TFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECA 234
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
LF+ + K++V WTAM+ G + +E ++ F +M SG+ +E+T+ +SACA L
Sbjct: 235 AELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQL 294
Query: 244 GASELGKWVHEFVNKNCIILNDK--LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
GAS+ + K+ +D +G+AL DMY+KCG +EEA+ VF + KNV T++S
Sbjct: 295 GASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSS 354
Query: 302 IIGGLAIHGCGEEAVKMF-WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
+I GLA HG +EA+ +F + + + IKP+ VT + L ACSH+GL+++G+++F +M +
Sbjct: 355 MILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQT 414
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
+ V+P HY C+VDLL R L EA E+I+ M +EP+ +WG+LL AC + N E+
Sbjct: 415 FGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHN---NPEI 471
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS-VIEIN 479
AEIA E L +LEP GNY+L+SN+YA+ W ++R+L+KE+ + K P S V++ N
Sbjct: 472 AEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKN 531
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLE 503
+H+F G+ HP S +I LE
Sbjct: 532 GQMHKFFPGNLNHPMSNKIQDKLE 555
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 172/500 (34%), Positives = 275/500 (55%), Gaps = 18/500 (3%)
Query: 7 PNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFK---QVHAQIIKASFDNRTI 63
P L+ F N N T + +L C L K +H +KA D+
Sbjct: 411 PEEALSLFQEMQNQKMKPNRVTL----MSILPACADLSLLKLGKSIHCFTVKADMDSDLS 466
Query: 64 SDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI 123
+ T L + A FN++ + +N++I GYA+ G + I ++ ++
Sbjct: 467 TGTALVSM---YAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLR 523
Query: 124 GNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
+ ++PD+ T ++ AC DL Q +H L+VK F S H LI Y G +
Sbjct: 524 LSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVK-LGFESDCHVKNALIDMYAKCGSL 582
Query: 181 KSAQLLFDQMT-EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
SA+ LF++ K+ VTW +I +++ + +E I F +MR N +T VSVL A
Sbjct: 583 PSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPA 642
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
A L A G H + + + N +G +L DMYAKCG + + ++F + K+ +W
Sbjct: 643 AAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSW 702
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N+++ G A+HG G+ A+ +F MQ S ++ D V+ ++VL+AC H GL+E+G++IF++M
Sbjct: 703 NAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSD 762
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
Y ++P+++HY C+VDLL RA L DE I+ MP+EP+A +WG+LL +C +NV+
Sbjct: 763 KYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMH---SNVK 819
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
L E+A++ L+KLEP N ++V++S+IYA +W DAGK R M + + K PGCS +E+
Sbjct: 820 LGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELK 879
Query: 480 DVVHEFMVGDGRHPCSEEIY 499
+ VH F VGD HP E ++
Sbjct: 880 NKVHAFRVGDKSHPQLESMH 899
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 185/334 (55%), Gaps = 10/334 (2%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
+S+T T H+ LL C HL Q+HAQII + F + S T L L SL + +A
Sbjct: 25 SSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHH-SITHLINLY-SLFHKCDLA 82
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC- 141
+ VF+ NPS +N++IR Y + + +++Y M+ GL+PD +T+ +LKAC
Sbjct: 83 RS--VFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACT 140
Query: 142 GDLRQVKGV--HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
G L +GV H + + + + L+ Y GD+K A+ +FD+M +++VV W
Sbjct: 141 GALNLQEGVWFHGEIDR-RGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWN 199
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
AMI G + ++ E +D FR M+ GVE + ++L+++ L EL + +H +V +
Sbjct: 200 AMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR 259
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ + L D+Y+KCG ++ A RVF +++++ +W +++ G A +GC E +++F
Sbjct: 260 --DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELF 317
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
+M++ ++ + V+ ++ A + +EKGKEI
Sbjct: 318 DKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEI 351
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 184/378 (48%), Gaps = 10/378 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
P + K +++ + +H + + R S LI+ + A VF+Q+++
Sbjct: 237 FPGICKLSNIELCRSIHGYVFR-----RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVD 291
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDPDSFTYPILLKACG--DLRQVKGV 150
++ T++ GYA G ++L+ +M +GN L A DL + K +
Sbjct: 292 QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEI 351
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H ++ + +S I T L+ Y G+ + A+ LF + +++V W+A+I V+
Sbjct: 352 HGCALQQR-IDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGY 410
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E + LF++M++ ++ N +TL+S+L ACA+L +LGK +H F K + + G A
Sbjct: 411 PEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTA 470
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L MYAKCG+ AL F + +++ TWNS+I G A G A+ MF+++++S I PD
Sbjct: 471 LVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPD 530
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
T++ V+ AC+ +++G I + + E + L+D+ + L A +
Sbjct: 531 AGTMVGVVPACALLNDLDQGTCI-HGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLF 589
Query: 391 RNMPMEPNAVLWGSLLTA 408
+ V W ++ A
Sbjct: 590 NKTDFTKDEVTWNVIIAA 607
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 145/291 (49%), Gaps = 10/291 (3%)
Query: 134 YPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
YP LL +C L + +H+ ++ S + HS+T LI Y F A+ +FD
Sbjct: 35 YPRLLSSCKHLNPLLQIHAQIIVSGFKHH--HSITHLINLYSLFHKCDLARSVFDSTPNP 92
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
+ + W +MI + + K Y E ++++ M + G+E ++ T VL AC + G W H
Sbjct: 93 SRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFH 152
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
+++ + + +GA L DMY+K G ++ A VF + +++V WN++I GL+
Sbjct: 153 GEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPC 212
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGC 372
EAV F MQ+ G++P V+L+ + IE + I Y RRD+ +
Sbjct: 213 EAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS----NG 268
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
L+DL + +D A V M ++ + V WG+++ A +G VE+ E+
Sbjct: 269 LIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMA--GYAHNGCFVEVLEL 316
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 176/469 (37%), Positives = 264/469 (56%), Gaps = 14/469 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
+ H ++K F T L + N + A VFN + + S ++ +I GY
Sbjct: 123 ETHGHVVKIGFCFDMYVSTALVDMYAKFGN---LGLARKVFNDMPDRSLVSWTALIGGYV 179
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSL 167
G L+ M G DS + +L+ + ++ SL + + N + S
Sbjct: 180 RRGDMGNAWFLFKLMPGR----DSAAFNLLIDGYVKVGDMESARSLFDEMPERNVI--SW 233
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV- 226
T +I YCN GDV SA+ LFD M EKN+V+W AMI G+ + K E + LFR+++ S V
Sbjct: 234 TSMIYGYCNNGDVLSARFLFDAMPEKNLVSWNAMIGGYCQNKQPHEALKLFRELQSSTVF 293
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
E NE+T+VS+L A A LGA ELG+WVH FV + + + +L DMY KCG I +A +
Sbjct: 294 EPNEVTVVSILPAIATLGALELGEWVHRFVQRKKLDAAVNVCTSLVDMYLKCGEISKARK 353
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF + +K TWN++I G A++G EA++ F +MQ GIKP+D+T+ VL+ACSH GL
Sbjct: 354 VFSEIPKKETATWNALINGFAMNGLASEALEAFSEMQQEGIKPNDITMTGVLSACSHGGL 413
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+E+GK F M + + P ++HYGCLVDLL RA LDEA +I++MP E N ++ S
Sbjct: 414 VEEGKGQFKAM-IESGLSPKIEHYGCLVDLLGRAGCLDEAENLIKSMPFEANGIILSSFS 472
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
AC ++D V A+ + + + +EP N+G YV+M N+YA + +W D ++ LM+ R
Sbjct: 473 FACGFSND---VTRAQRVLNQAVNMEPGNNGIYVMMRNLYAMEERWKDVKEINGLMRRRG 529
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
K G S IE++ V EF+ G HP + I S++ + I +R+ A
Sbjct: 530 AKKEVGSSAIEVDSRVSEFISGGIAHPQLDVIESVIGQLWIHMRDSVVA 578
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 195/394 (49%), Gaps = 42/394 (10%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYA-HLVFNQII 92
L LLQ+C Q+HA I++ + D L K I + S +A HL N+
Sbjct: 6 LFLLQRCRTRKTLLQIHALILRNAIDANV---NILTKFITTCGQLSSTRHARHLFDNRSH 62
Query: 93 NPSTFAFNTVIRGY------AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
TF N++I+ + A+A ++ ++ T + PD+FT+ +L K C LR
Sbjct: 63 RGDTFLCNSMIKSHVVMRQLADAFTLYKDLRRETCFV-----PDNFTFTVLAKCCA-LRM 116
Query: 147 V--KGV--HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
+G+ H VVK F ++ T L+ Y FG++ A+ +F+ M ++++V+WTA+I
Sbjct: 117 AVWEGLETHGHVVKI-GFCFDMYVSTALVDMYAKFGNLGLARKVFNDMPDRSLVSWTALI 175
Query: 203 NGHVKQKNYREGIDLFRKM--RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
G+V++ + LF+ M RDS ++ +G E + + + + +
Sbjct: 176 GGYVRRGDMGNAWFLFKLMPGRDSA------AFNLLIDGYVKVGDMESARSLFDEMPERN 229
Query: 261 IILNDKLGAALTDM-YAKC--GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
+I + T M Y C G + A +F + EKN+ +WN++IGG + EA+K
Sbjct: 230 VI-------SWTSMIYGYCNNGDVLSARFLFDAMPEKNLVSWNAMIGGYCQNKQPHEALK 282
Query: 318 MFWQMQMSGI-KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDL 376
+F ++Q S + +P++VT++++L A + G +E G+ + ++R K++ V LVD+
Sbjct: 283 LFRELQSSTVFEPNEVTVVSILPAIATLGALELGEWVHRFVQRK-KLDAAVNVCTSLVDM 341
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ + +A +V +P + A W +L+ A
Sbjct: 342 YLKCGEISKARKVFSEIPKKETAT-WNALINGFA 374
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 171/483 (35%), Positives = 279/483 (57%), Gaps = 8/483 (1%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINP 94
+L+ C+ L+ + QI + I+D+ +A LI+ S ++ A +F +
Sbjct: 1011 VLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDL 1070
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVH 151
+N ++ GY G + ++L++ + +G D T KACG L Q K +H
Sbjct: 1071 DLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIH 1130
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
+ +K+ F+S +H + ++ Y GD+ +A ++F+ ++ + V WT+MI+G V N
Sbjct: 1131 AHAIKAG-FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNE 1189
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
+ + ++ +MR S V +E T +++ A + + A E G+ +H V K + + +G +L
Sbjct: 1190 DQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSL 1249
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
DMYAKCG IE+A R+FK + +N+ WN+++ GLA HG EEAV +F M+ GI+PD
Sbjct: 1250 VDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDR 1309
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
V+ I +L+ACSHAGL + E ++M DY +EP ++HY CLVD L RA L+ EA +VI
Sbjct: 1310 VSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIE 1369
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
MP + +A + +LL AC D VE + RL LEPF+ YVL+SNIYAA +
Sbjct: 1370 TMPFKASASINRALLGACRIQGD---VETGKRVAARLFALEPFDSAAYVLLSNIYAAANR 1426
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
WDD R++MK +N+ K+PG S I++ +++H F+V D HP ++ IY +E + ++RE
Sbjct: 1427 WDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIRE 1486
Query: 512 ECY 514
+ Y
Sbjct: 1487 DGY 1489
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 162/333 (48%), Gaps = 9/333 (2%)
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
AYA + NP F +N + AG I+ + M G +D D+ T ++L A
Sbjct: 855 AYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAV 914
Query: 142 G---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
DL K VH + VKS +S + L+ Y G A+ +F+ M ++++W
Sbjct: 915 AGTDDLELGKQVHGIAVKSG-LDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISW 973
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL-GASELGKWVHEFVN 257
+MI+ + E ++LF + G++ + TL SVL AC++L + + +H
Sbjct: 974 NSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHAL 1033
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
K I + + L D+Y+K G +EEA +F+ + ++ WN+++ G I G++A++
Sbjct: 1034 KTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALE 1093
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDL 376
+F + SG K D +TL AC L+++GK+I + ++ + + +V ++D+
Sbjct: 1094 LFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVN--SGILDM 1151
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
+ + A ++ N P+ V W S+++ C
Sbjct: 1152 YIKCGDMVNA-GIVFNYISAPDDVAWTSMISGC 1183
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 5/178 (2%)
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV-----KQKNYREGIDLFRKMRDS 224
L+T Y G + SA+ +FD E+++VTW A++ + N +EG+ LFR +R S
Sbjct: 662 LLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRAS 721
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
+TL VL C N G + VH + K + + + AL ++Y+KCG + +A
Sbjct: 722 LGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDA 781
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+F + E++V WN ++ G G +EA ++F + SG++PD+ ++ +L S
Sbjct: 782 RLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVS 839
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 163/391 (41%), Gaps = 48/391 (12%)
Query: 30 SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
S H+L LL KCTH ++ S + +S+ L+ ++ A VF+
Sbjct: 633 STHNL-LLGKCTHA-------RIVVSGSAGDHFLSNN----LLTMYSKCGSLSSARQVFD 680
Query: 90 QIINPSTFAFNTVIRGYAEA-----GLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC--- 141
+N ++ YA + G G+ L+ + + T +LK C
Sbjct: 681 TTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNS 740
Query: 142 GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
G L +GVH +K V S L+ Y G ++ A+LLFD M E++VV W M
Sbjct: 741 GCLWAAEGVHGYAIKIGLEWDVFVS-GALVNIYSKCGRMRDARLLFDWMRERDVVLWNMM 799
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
+ G+V+ +E LF + SG+ +E ++ +L+ + + E GKW
Sbjct: 800 LKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDE-GKW---------- 848
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
L D++ A AK ++ VF WN + G A++ F
Sbjct: 849 -LADQVQA----YAAKLSLSDDNPDVF---------CWNKKLSECLWAGDNWGAIECFVN 894
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
M I D VTL+ VL A + +E GK++ + + ++ +V LV++ +
Sbjct: 895 MNGLNIDYDAVTLLVVLAAVAGTDDLELGKQV-HGIAVKSGLDSDVSVANSLVNMYSKMG 953
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
A EV +M + + W S++++CA +
Sbjct: 954 CAYFAREVFNDMK-HLDLISWNSMISSCAQS 983
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 181/499 (36%), Positives = 280/499 (56%), Gaps = 52/499 (10%)
Query: 24 SNTATKSHHHLP-------LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLV 76
S + K H LP + + C + K +HA+ +A+ N + LAK+
Sbjct: 228 SYISNKVMHMLPTSQSLASMAEACLAMQALKLIHARAFRANLHNHALV---LAKIFRFAA 284
Query: 77 NSSQ--IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
S + YA +F+QI P+TF +NT+IRGY+++ + +QL+ QM N +DPD FT+
Sbjct: 285 VSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTF 344
Query: 135 PILLKACGDLR-------QVKGVHSLVVKSKD------FNSVIH---------------- 165
LLK +R +H V+K N++IH
Sbjct: 345 TFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFN 404
Query: 166 --------SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
S + L+ + G+++ A+ +FD+M E++VV+WT M++G+ + K RE ++L
Sbjct: 405 EMVGADVVSWSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALEL 464
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
FR+MRD GV +E+ +V V+SAC +LG E G VH ++++N L AL DMYAK
Sbjct: 465 FREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAK 524
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG ++ A +VF + K++ TWNS+I A HG E+A ++F M SGI+PD VT +A+
Sbjct: 525 CGCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLXSGIRPDGVTFLAL 584
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
LTA +H G ++ G +F +M+RDY VE V+HYGC+VD+L RA L+EAY++I +M M
Sbjct: 585 LTAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPC 644
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
N V+WG+LL AC D VE+ E +++LI+L+P G Y+L+ +IY A + +A +
Sbjct: 645 NDVVWGALLAACRIYGD---VEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIE 701
Query: 458 MRRLMKERNIVKNPGCSVI 476
+RR M K GCS +
Sbjct: 702 LRRAMDVNGAKKTLGCSWV 720
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 213/497 (42%), Gaps = 107/497 (21%)
Query: 24 SNTATKSHHHLP-------LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLV 76
S + K H LP + + C + K +HA+ +A+ N + LAK+
Sbjct: 74 SYISNKVMHMLPTSQSLASMAEACLAMQALKLIHARAFRANLHNHALV---LAKIFRFAA 130
Query: 77 NSSQ--IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
S + YA +F+QI P+TF +NT+IRGY+++ + +QL+ QM N +DPD FT+
Sbjct: 131 VSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTF 190
Query: 135 PILLKACGDLR----------QVKGV-----HSLVVKSKDFNSVIHSLT----------- 168
LLK +R ++ G +KS N V+H L
Sbjct: 191 TFLLKGRSRMRIDLPLIVASDEIHGAGVDYDKYKTLKSYISNKVMHMLPTSQSLASMAEA 250
Query: 169 -------RLI---TFYCNF-------------------GDVKSAQLLFDQMTEKNVVTWT 199
+LI F N G + A LF Q+ + N +
Sbjct: 251 CLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYN 310
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL--------------GA 245
+I G+ K + + + LF +MR + V+ + T +L + + GA
Sbjct: 311 TLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGA 370
Query: 246 S-ELGKWVHEFVNKNCI--------------ILNDKLGA------ALTDMYAKCGYIEEA 284
+LG H FV I + N+ +GA L + + G +E A
Sbjct: 371 VLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELA 430
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
+VF + E++V +W ++ G A EA+++F +M+ G++PD+V ++ V++AC+
Sbjct: 431 RQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSL 490
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
G +E G E+ + + V L+D+ + +D A++V NM + + W S
Sbjct: 491 GDLETGFEVHRYIDEN-GFGWMVSLCNALIDMYAKCGCMDLAWQVFNNME-RKSLITWNS 548
Query: 405 LLTACA---SADDGANV 418
+++ACA +A+D V
Sbjct: 549 MISACANHGNAEDAFRV 565
>gi|359488917|ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
chloroplastic-like [Vitis vinifera]
Length = 1146
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 172/502 (34%), Positives = 274/502 (54%), Gaps = 16/502 (3%)
Query: 11 LTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK 70
L+ FT+ ++ N K L LL C+ + Q+ A R + + L
Sbjct: 654 LSEFTDISSDKMN----VKPQQCLSLLNLCSSMKHLFQIRGHGFIAGPLLRFCASSPLGN 709
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
L +A ++ + ++N +IR YA I Y +M G+ PD
Sbjct: 710 L----------NHARVLLSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPD 759
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVK--SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
T+PILLKAC + + V + ++ +I FY + ++ A+ +FD
Sbjct: 760 KLTFPILLKACAAISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFD 819
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
+M+ + VV+W A+++ V + + LF KMR SG + +E T+V +LSAC+ LG
Sbjct: 820 EMSYRTVVSWNAVLSACVDNEWLNDSFGLFVKMRGSGFDPDETTMVILLSACSELGNLSF 879
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G+WVH V + +++N +LG AL DMYAKCG + EA VF +LE+NV TW+++I GLA
Sbjct: 880 GRWVHSQVIEKGMVVNCRLGTALVDMYAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQ 939
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
HG +EA+++F +M+ S I P+ VT + VL ACSHAGL++ G F++M + +EP +
Sbjct: 940 HGFAKEALELFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMI 999
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HYG +VD+L RA L EAY I NMP+E + V+W +LL+AC N + + +RL
Sbjct: 1000 HYGAMVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGINDNDGVGDKVRKRL 1059
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
++LEP GN+V+++N+YA +WD A +RR MK+ + K G S IE+ +H F G
Sbjct: 1060 LELEPRRSGNFVMVANMYAEVGKWDKAANVRRTMKDTGLKKMAGESCIEVGGSIHRFFSG 1119
Query: 489 DGRHPCSEEIYSMLEYVAISLR 510
D E++ +L+ + + ++
Sbjct: 1120 DDPQLDCEDVLQLLDGLNLHMK 1141
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 275/479 (57%), Gaps = 21/479 (4%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
++VH + K F + T L + SL +A A+ VF ++ + + FA+ ++
Sbjct: 140 EEVHCVVAKRGFKSNTFVGCALIHMY-SLRGGVFVADAYKVFAEMRDKNVFAWTAIV--- 195
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHS 166
A + R + ++ D + +++ +L + L + D + + S
Sbjct: 196 -AAHVACRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRMPDRD--VMS 252
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM----- 221
+++ Y G+V+S LF++M +NV +W +I G+V+ ++E ++ F++M
Sbjct: 253 WNTVLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVE 312
Query: 222 ------RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
D V N+ T+V+VL+AC+ LG E+GKWVH + N +G AL DMY
Sbjct: 313 GEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALIDMY 372
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
AKCG IE+AL VF + K++ TWN+II GLA+HG +A+ +F +M+ +G +PD VT +
Sbjct: 373 AKCGVIEKALDVFDGLDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFV 432
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
+L+AC+H GL+ G F +M DY + P ++HYGC+VDLL RA L+D+A +++R MPM
Sbjct: 433 GILSACTHMGLVRNGLLHFQSMVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRKMPM 492
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
EP+AV+W +LL AC NVE+AE+A++RLI+LEP N GN+V++SNIY + D
Sbjct: 493 EPDAVIWAALLGACRMYK---NVEMAELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDV 549
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+++ M++ K PGCSVI ND + EF D RHP ++ IY L+ + I LR Y
Sbjct: 550 ARLKVAMRDTGFRKVPGCSVIGCNDSMVEFYSLDERHPETDSIYRALQGLTILLRSHGY 608
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 181/394 (45%), Gaps = 32/394 (8%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+ LL+ C V+ Q+ AQI+ + +D I + I A VF++
Sbjct: 26 ISLLRTCGTCVRLHQIQAQIVTHGLEG---NDYVTPSFITACARLGGIRRARRVFDKTAQ 82
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GV 150
P+ +N + RGYA+A + L+ +M G P+ FT+P+++K+C K V
Sbjct: 83 PNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKSCATANAAKEGEEV 142
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGD--VKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
H +V K + F S LI Y G V A +F +M +KNV WTA++ HV
Sbjct: 143 HCVVAK-RGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFAWTAIVAAHVAC 201
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
++ LF V + + + + + A EL +++ + N L
Sbjct: 202 RDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAAREL---FDRMPDRDVMSWNTVLS 258
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM---- 324
YA G +E +++F+ + +NV +WN +IGG +G +EA++ F +M +
Sbjct: 259 G-----YATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEG 313
Query: 325 -------SGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYGCLVDL 376
+ P+D T++AVLTACS G +E GK + Y YK N+ L+D+
Sbjct: 314 EGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWVHVYAESIGYK--GNLFVGNALIDM 371
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ ++++A +V + ++ + + W +++ A
Sbjct: 372 YAKCGVIEKALDVFDGLDVK-DIITWNTIINGLA 404
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
ND + + A+ G I A RVF + N TWN++ G A C + V +F +M
Sbjct: 53 NDYVTPSFITACARLGGIRRARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFARMH 112
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLVDLLCRAR- 381
+G P+ T V+ +C+ A ++G+E+ + +R +K V GC + + R
Sbjct: 113 RAGASPNCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKSNTFV---GCALIHMYSLRG 169
Query: 382 --LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV-ELAEIAMERLIKLEPFNDGN 438
+ +AY+V M + N W +++ A + D + L ++A +R + L
Sbjct: 170 GVFVADAYKVFAEM-RDKNVFAWTAIVAAHVACRDMVSARRLFDLAPQRDVVLWNVVVSG 228
Query: 439 YVLMSNIYAAKAQWD 453
Y+ + ++ AA+ +D
Sbjct: 229 YIELGDMVAARELFD 243
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 182/517 (35%), Positives = 292/517 (56%), Gaps = 37/517 (7%)
Query: 15 TNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL------ 68
T A++ S + H L LL++ + Q A ++K+ + + T+L
Sbjct: 16 TAPASNPTASPSRAAEQHCLRLLERSSTPASLLQSFAFLLKSGLHSNPLVVTRLFAASAS 75
Query: 69 --AKLIESLVNSSQIAYAHLVFNQIINPS----TFAFNTVIRGYAEAGLG---HRGIQLY 119
L+E LV+S ++ PS F NT+IR + + R +
Sbjct: 76 AAPALLEPLVSS------------LLGPSLPLDAFLVNTLIRTHVTSPFPSARRRAAAFF 123
Query: 120 TQMIGNGLDPDSFTYPILLKACGDLRQVKGV----HSLVVKSKDFNSVIHSLTRLITFYC 175
M+ + P+ FT+P LLK+C L V H+ +K F + + LI Y
Sbjct: 124 PLMLRAAVAPNKFTFPFLLKSCAALPGSPDVGLQAHAAALKF-GFAADHYVSNTLIHMYS 182
Query: 176 NFGD--VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
FG + A+ +F++M ++ VTW+AMI G+V+ + + LFR M+ SGV +E+T+
Sbjct: 183 CFGAGFLGDARNVFERMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRPDEVTV 242
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
+ VL+A A+LGA EL +WV FV + I + L AL D AKCG ++ A+ VF+ + E
Sbjct: 243 IGVLAAAADLGALELTRWVGRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMEE 302
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
+ V +W S+I LA+ G G+EAV +F +M+ G+ PDDV I VLTACSHAG++++G+
Sbjct: 303 RTVVSWTSVIDALAMEGRGKEAVGVFEEMKAVGVLPDDVAFIGVLTACSHAGMVDEGRGY 362
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F +M+ +Y +EP ++HYGC+VD+ RA ++++ E +R MPM+PN ++W +L+ AC +
Sbjct: 363 FDSMKTEYGIEPKIEHYGCMVDMFGRAGMVEQGLEFVRAMPMKPNPIIWRTLVAACRAH- 421
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
+EL E L+ P ++ NYV++SN+YA +W + ++RR M +R I K PGC
Sbjct: 422 --GRLELGESITRNLLNEFPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGC 479
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
S++E++ VHEF+ GD HP +EIY M+E ++ LR
Sbjct: 480 SLVELDGEVHEFIAGDESHPQYKEIYRMVEEMSRELR 516
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 154/334 (46%), Positives = 220/334 (65%), Gaps = 3/334 (0%)
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
FG A LF +M ++VV+W +M+ + + E + LF +MR GV+ E T+VS+
Sbjct: 161 FGKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSL 220
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
LSACA+LGA + G +H ++N N I +N +G AL DMYAKCG I A +VF + K+V
Sbjct: 221 LSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDV 280
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
WN+II G+AIHG +EA ++F +M+ +G++P+D+T +A+L+ACSHAG++++G+++
Sbjct: 281 LAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDC 340
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
M Y +EP V+HYGC++DLL RA LL+EA E+I MPMEPN G+LL C
Sbjct: 341 MSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIH---G 397
Query: 417 NVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
N EL E+ +RLI L+P + G Y+L+SNIYAA +WDDA K+R LMK I K PG SVI
Sbjct: 398 NFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVI 457
Query: 477 EINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
E+ +VH F+ GD HP S +IY L + L+
Sbjct: 458 ELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLK 491
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 126/230 (54%), Gaps = 8/230 (3%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
+F+++ ++N+++ YA+ G + + L+ QM G+ P T LL AC L
Sbjct: 170 LFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGA 229
Query: 147 V-KGVH--SLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
+ KG+H + + ++ + NS++ T L+ Y G + A +F+ M K+V+ W +I
Sbjct: 230 LDKGLHLHTYINDNRIEVNSIVG--TALVDMYAKCGKISLATQVFNAMESKDVLAWNTII 287
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
G + +E LF++M+++GVE N++T V++LSAC++ G + G+ + + ++ + I
Sbjct: 288 AGMAIHGHVKEAQRLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGI 347
Query: 263 LND-KLGAALTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSIIGGLAIHG 310
+ + D+ A+ G +EEA+ + + +E N C +++GG IHG
Sbjct: 348 EPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHG 397
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 36 LLQKCTHLVQFKQ---VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL C HL + +H I + +I T L ++ +I+ A VFN +
Sbjct: 220 LLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTAL---VDMYAKCGKISLATQVFNAME 276
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
+ A+NT+I G A G +L+ +M G++P+ T+ +L AC
Sbjct: 277 SKDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITFVAMLSAC 325
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 291/506 (57%), Gaps = 13/506 (2%)
Query: 17 SANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKA-SFDNRTISDTQLAKLIESL 75
S H SN + + + C+ + + +H ++IK+ ++++ I D +L+ S
Sbjct: 28 SPTFHAFSNVDSLVSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGD----QLVSSY 83
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE-AGLGHRGIQLYTQMIGNGLDPDSFTY 134
V A +F+++ + ++N++I G++ A LG L+ GL P+ T
Sbjct: 84 VELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTV 143
Query: 135 PILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
++ AC G+L K +H + VKS V + LI Y G +++A LF+ M+
Sbjct: 144 IPVVSACAGVGELDVGKCIHGIAVKSGMLLEV-KVVNSLINLYGKCGCLEAACCLFEGMS 202
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+++V+W +M+ HV +GI F MR +G+ ++ T+VS+L AC NLG +L +
Sbjct: 203 VQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEA 262
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
VH ++ + N + AL D+YAK G + ++ +VF ++ + W +++ A+HG
Sbjct: 263 VHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGR 322
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
G EA++ F M G+ PD VT +L+ACSH+GL+E+GK F M Y VE V+HY
Sbjct: 323 GREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYS 382
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VDLL R+ L++AY++I++MPMEPN+ +WG+L+ AC N+EL + ERL L
Sbjct: 383 CMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVR---GNIELGKEVAERLFSL 439
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
+P + NY+ +SN+Y+A QW DA K+R LMKER +++NPGCS IE + +H F++GD
Sbjct: 440 DPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQS 499
Query: 492 HPCSEEIYSMLEYVAISLREECYAAR 517
HP +E+IY+ LE + RE +A++
Sbjct: 500 HPDTEQIYNKLEELVRKNREVGFASK 525
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 158/446 (35%), Positives = 260/446 (58%), Gaps = 10/446 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I + ++ A +F ++ FA+ ++ G+ + G+ +++ +M + +
Sbjct: 252 MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP----EKN 307
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
++ ++ +Q++ L + N+ S ++T Y G++ A++LFD+M
Sbjct: 308 EVSWNAMIAGYVQSQQIEKARELFDQMPSRNT--SSWNTMVTGYAQCGNIDQAKILFDEM 365
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
+++ ++W AMI+G+ + E + LF KM+ G +N L LS+CA + A ELGK
Sbjct: 366 PQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGK 425
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
+H + K G AL MY KCG IEEA VF+ + EK++ +WN++I G A HG
Sbjct: 426 QLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHG 485
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
G+EA+ +F M+M+ IKPDDVTL+ VL+ACSH G ++KG E F +M ++Y + N KHY
Sbjct: 486 FGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHY 544
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
C++DLL RA LDEA ++++MP P+A WG+LL A D EL E A E++ +
Sbjct: 545 TCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGD---TELGEKAAEKVFE 601
Query: 431 LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
+EP N G YVL+SN+YAA +W + +MR M+++ + K PG S +EI + H F VGD
Sbjct: 602 MEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDC 661
Query: 491 RHPCSEEIYSMLEYVAISLREECYAA 516
HP +E IY+ LE + + L+++ + +
Sbjct: 662 SHPEAERIYAYLEELDLELKKDGFVS 687
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 164/368 (44%), Gaps = 41/368 (11%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI------G 124
++ V + ++ A +FNQ+ ++N ++ G+A+ G +++ QM+
Sbjct: 128 MLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISW 187
Query: 125 NGL---------------------DPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSV 163
NGL D + ++ L+ +++ SL + + +
Sbjct: 188 NGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKI 247
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
S +IT Y G + A+ LF+++ ++V WTAM++G V+ E +F +M
Sbjct: 248 --SWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM-- 303
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWV-HEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
E NE++ ++++ E + + + ++N N + YA+CG I+
Sbjct: 304 --PEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWN-----TMVTGYAQCGNID 356
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+A +F + +++ +W ++I G A G EEA+ +F +M+ G + L L++C+
Sbjct: 357 QAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCA 416
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
+E GK++ + + + L+ + + ++EA++V ++ E + V W
Sbjct: 417 EIAALELGKQLHGRLVK-AGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDIT-EKDIVSW 474
Query: 403 GSLLTACA 410
+++ A
Sbjct: 475 NTMIAGYA 482
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 167/406 (41%), Gaps = 81/406 (19%)
Query: 52 QIIKASFDNRTISDTQLAKL---IESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE 108
Q +++ + TI D+ + K I + + Q A VFN + ST +N +I GY
Sbjct: 44 QKLESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGY-- 101
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLT 168
L + ++ D D ++ ++L
Sbjct: 102 --LSNNKFDCARKVFEKMPDRDLISWNVMLSG---------------------------- 131
Query: 169 RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV 228
Y G++ +A+ LF+QM EK+VV+W AM++G + E RK+ D +
Sbjct: 132 -----YVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEA----RKIFDQMLVK 182
Query: 229 NELTLVSVLSACANLGASELGKWVH------EFVNKNCII-------------------- 262
NE++ +LSA G E + + E V+ NC++
Sbjct: 183 NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP 242
Query: 263 LNDKLG-AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
+ DK+ + YA+ G + EA R+F+ + ++V W +++ G +G +EA ++F +
Sbjct: 243 VRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEE 302
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
M + ++V+ A++ + IEK +E+F D N + +V +
Sbjct: 303 MP----EKNEVSWNAMIAGYVQSQQIEKARELF-----DQMPSRNTSSWNTMVTGYAQCG 353
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+D+A + MP + + + W ++++ A + I M+R
Sbjct: 354 NIDQAKILFDEMP-QRDCISWAAMISGYAQSGQSEEALHLFIKMKR 398
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 137/301 (45%), Gaps = 28/301 (9%)
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
+I+ Y + A+ +F++M ++++++W M++G+VK N LF +M + V
Sbjct: 97 MISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV--- 153
Query: 230 ELTLVSVLSACANLG-ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
++ ++LS A G E K + + KN I N L A Y + G IE+A R+F
Sbjct: 154 -VSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSA-----YVQNGRIEDARRLF 207
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
++ + +WN ++GG ++A +F +M + D ++ ++T + GL+
Sbjct: 208 DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR----DKISWNIMITGYAQNGLLS 263
Query: 349 KGKEIFYNMR-RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
+ + +F + RD V + +V + +LDEA + MP E N V W +++
Sbjct: 264 EARRLFEELPIRD------VFAWTAMVSGFVQNGMLDEATRIFEEMP-EKNEVSWNAMIA 316
Query: 408 ACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
+ + E A E ++ N ++ M YA D A + M +R+
Sbjct: 317 GYVQS------QQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDC 370
Query: 468 V 468
+
Sbjct: 371 I 371
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 109/289 (37%), Gaps = 65/289 (22%)
Query: 37 LQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L C + KQ+H +++KA F I+ L + I A VF I
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYG---KCGSIEEAFDVFEDITE 468
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-KGV-- 150
++NT+I GYA G G + L+ M + PD T +L AC V KG+
Sbjct: 469 KDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEY 527
Query: 151 -------HSLVVKSKDFNSVIHSLTRL------------ITFYCN-------------FG 178
+ + +K + +I L R + FY + G
Sbjct: 528 FNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHG 587
Query: 179 DV----KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG--------- 225
D K+A+ +F +M N + + N + +RE ++ KMRD G
Sbjct: 588 DTELGEKAAEKVF-EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSW 646
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHE---------FVNKNCIILND 265
VE+ T + + C++ A + ++ E FV+ ++L+D
Sbjct: 647 VEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHD 695
>gi|242058803|ref|XP_002458547.1| hypothetical protein SORBIDRAFT_03g035530 [Sorghum bicolor]
gi|241930522|gb|EES03667.1| hypothetical protein SORBIDRAFT_03g035530 [Sorghum bicolor]
Length = 483
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 249/415 (60%), Gaps = 10/415 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A ++F + P F FN+++R A + L+ IG G+ P+ +T+P++L +
Sbjct: 75 ALVLFASLPRPHVFVFNSLLRSL-PAAPACSPLPLFRHFIGLGVRPNRYTFPLMLTSLSS 133
Query: 144 LRQVKGVHSLVVKSKDFNSVIHSLTRLITFY--CNFGDVKSAQLLFDQMTEKNVVTWTAM 201
L ++ VHS V KS F +H L+ Y C+ D+ A+ LFD+M +VV WT M
Sbjct: 134 LHELSAVHSQVAKS-GFARDLHVRNALLASYAACD-PDLGHAEQLFDEMPSPDVVAWTTM 191
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
I + + + FR+M + V N +T+VS L ACA GA + G W+H++V K
Sbjct: 192 ITAYRNRGRSFHALSTFRRMFAASVAPNRVTMVSALGACAAHGAVDTGIWIHQYVQKQGW 251
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
L+ LG AL DMY KCG++ E +RVF + E+NVCTWNSIIG A+ GE A++ F++
Sbjct: 252 ELDVVLGTALVDMYGKCGHVVEGVRVFSEMTERNVCTWNSIIGAFALEQNGEMALRWFYR 311
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRA 380
M+ G++PD VTLI VL AC+HAGL++ G++IF ++ Y +P +KH+GC++DLL R+
Sbjct: 312 MKADGVRPDAVTLICVLYACTHAGLVDIGRKIFNLIVQGKYGFQPGIKHFGCMIDLLSRS 371
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
LD+A+ V+ MP +P+AV+WG LL C D +L+E RL++LEP N +YV
Sbjct: 372 GHLDDAFRVLEAMPSQPDAVIWGLLLQGCKVRGD---TDLSEYVTMRLVELEPGNASHYV 428
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
++N+YA +W +A ++ + MKE+ + K+ G S + + D + +++ + C+
Sbjct: 429 TLANLYAETGRWLEAEEVLKGMKEKGLAKDAGWS-LRLEDSLSKYISDENLMECA 482
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 273/485 (56%), Gaps = 12/485 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQII 92
LP L Q K++H I++ N D L + L++ + A V++
Sbjct: 355 LPALTDLNGFNQGKELHGYIVR----NCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSK 410
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---G 149
+T+I GY G+ ++++ ++ G+ P++ +L AC + +K
Sbjct: 411 AIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQE 470
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+HS +K+ + + + L+ Y G + + +F +++ K+ VTW +MI+ +
Sbjct: 471 LHSYALKNA-YEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNG 529
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E ++LFR+M GV+ + +T+ SVLSACA+L A GK +H V K I + +
Sbjct: 530 EPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAES 589
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMY KCG +E A RVF+ + EKN +WNSII +G +E+V + MQ G K
Sbjct: 590 ALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKA 649
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D VT +A+++AC+HAG +++G +F M +Y++ P ++H+ C+VDL RA LD+A E+
Sbjct: 650 DHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMEL 709
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I +MP +P+A +WG+LL AC NVELAEIA + L KL+P N G YVLMSNI A
Sbjct: 710 IVDMPFKPDAGIWGALLHACRVHR---NVELAEIASQELFKLDPHNSGYYVLMSNINAVA 766
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+WD K+RRLMK+ + K PG S +++N+ H F+ D HP SE+IY L+ + + L
Sbjct: 767 GRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLEL 826
Query: 510 REECY 514
REE Y
Sbjct: 827 REEGY 831
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 194/424 (45%), Gaps = 51/424 (12%)
Query: 34 LPLLQKC---THLVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFN 89
L +L+ C +HL QVH + + A +DT L +L+ V + + A VF+
Sbjct: 43 LAVLRGCVSPSHLSLGLQVHGRAVTAGLHA---TDTALQTRLVGMYVLARRFRDAVAVFS 99
Query: 90 QIINPST---FAFNTVIRGYAEAGLGHRGIQLYTQMIG--NGLDPDSFTYPILLKACGDL 144
+ + +N +IRG AG + Y +M + PDS T+P ++K+C L
Sbjct: 100 SLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAAL 159
Query: 145 RQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
+ + VH ++ + + + LI Y N G + A+ +FD M E++ V W M
Sbjct: 160 GAIALGRLVHR-TARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVM 218
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
++G+VK + ++LF MR SG E N TL LS A G +H K +
Sbjct: 219 MDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGL 278
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
+ L MYAKC +++ ++F ++ ++ TWN +I G +G ++A+ +F
Sbjct: 279 ESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCD 338
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL--CR 379
MQ SGI+PD VTL+++L A + +GKE+ + R+ V +V LVD+ CR
Sbjct: 339 MQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNC-VHMDVFLVSALVDIYFKCR 397
Query: 380 A-RLLDEAYE-----------------VIRNMPME--------------PNAVLWGSLLT 407
A R+ Y+ V+ M E PNAV S+L
Sbjct: 398 AVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLP 457
Query: 408 ACAS 411
ACAS
Sbjct: 458 ACAS 461
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 171/346 (49%), Gaps = 8/346 (2%)
Query: 69 AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD 128
+ LI+ N + A VF+ + +N ++ GY +AG ++L+ M +G +
Sbjct: 185 SALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCE 244
Query: 129 PDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL 185
P+ T L DL +H+L VK S + L++ Y +
Sbjct: 245 PNFATLACFLSVSATESDLFFGVQLHTLAVK-YGLESEVAVANTLVSMYAKCKCLDDGWK 303
Query: 186 LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA 245
LF M ++VTW MI+G V+ + + LF M+ SG+ + +TLVS+L A +L
Sbjct: 304 LFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNG 363
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
GK +H ++ +NC+ ++ L +AL D+Y KC + A V+ +V +++I G
Sbjct: 364 FNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISG 423
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVE 364
++G +EAVKMF + GI+P+ V + +VL AC+ ++ G+E+ Y ++ Y+
Sbjct: 424 YVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGR 483
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
V+ L+D+ + LD ++ + + + + V W S++++ A
Sbjct: 484 CYVE--SALMDMYAKCGRLDLSHYIFSKISAK-DEVTWNSMISSFA 526
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 271/469 (57%), Gaps = 10/469 (2%)
Query: 49 VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE 108
VH +++A F++ T L ++ ++ A ++F+ + + + ++N++I GY +
Sbjct: 153 VHGYVLRAGFESLVNVSTAL---VDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQ 209
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIH 165
+G + ++ +M+ G+ P + T L AC GDL + K VH LV + K +S +
Sbjct: 210 SGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLK-LDSDVS 268
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
+ LI+ Y V A +F + K +V+W AMI G+ + E ++ F +M+
Sbjct: 269 VMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRN 328
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
++ + T+VSV+ A A L KW+H V + + N + AL DMYAKCG I A
Sbjct: 329 IKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTAR 388
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
++F ++ ++V TWN++I G HG G+ +V++F +M+ IKP+D+T + L+ACSH+G
Sbjct: 389 KLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSG 448
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
L+E+G F +M++DY +EP + HYG +VDLL RA L++A++ I+ MP++P ++G++
Sbjct: 449 LVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAM 508
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L AC NV+L E A + KL P + G +VL++NIYA + W K+R +M++
Sbjct: 509 LGACKIH---KNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKS 565
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ K PGCS++EI + VH F G HP S++IYS LE + +R Y
Sbjct: 566 GLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGY 614
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 213/412 (51%), Gaps = 12/412 (2%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKC---THLVQFKQVHAQIIKAS 57
MLK +S L + + K+ + ++ LL+ C + L + K++H +I +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 58 FDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQ 117
F + T + + QI A+ +F+++ +NT+I GYA+ G +
Sbjct: 61 FSWNLFAMTGVVNM---YAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALM 117
Query: 118 LYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFY 174
L +M G PDS T +L A D R ++ VH V+++ F S+++ T L+ Y
Sbjct: 118 LVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRA-GFESLVNVSTALVDMY 176
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
G V A+++FD M + VV+W +MI+G+V+ + + +F+KM D GV+ +T++
Sbjct: 177 SKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVM 236
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
L ACA+LG E GK+VH+ V++ + + + +L MY+KC ++ A +FK + K
Sbjct: 237 GALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNK 296
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
+ +WN++I G A +GC EA+ F +MQ IKPD T+++V+ A + + + K I
Sbjct: 297 TLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIH 356
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+ R + ++ NV LVD+ + + A ++ +M + + W +++
Sbjct: 357 GLVIRRF-LDKNVFVMTALVDMYAKCGAIHTARKLF-DMMNARHVITWNAMI 406
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 196/402 (48%), Gaps = 37/402 (9%)
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSK 158
+++GYA++ + +++M + + P + + LLK CGD L++ K +H V+ S
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITS- 59
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
F+ + ++T ++ Y + A +FD+M E+++V W MI+G+ + + + L
Sbjct: 60 GFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV 119
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
+M + G + +T+VS+L A A+ +G VH +V + + AL DMY+KC
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G + A +F + + V +WNS+I G G E A+ +F +M G++P +VT++ L
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP- 397
AC+ G +E+GK + + + K++ +V L+ + + + +D A ++ +N+ +
Sbjct: 240 HACADLGDLERGKFV-HKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298
Query: 398 ---NAVLWGSLLTACASADDGANVE-------------------LAEIAMERLIK----- 430
NA++ G C + A E LAE+++ R K
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGL 358
Query: 431 -LEPFNDGNYVLMS---NIYAAKAQWDDAGKMRRLMKERNIV 468
+ F D N +M+ ++YA A K+ +M R+++
Sbjct: 359 VIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVI 400
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 178/498 (35%), Positives = 287/498 (57%), Gaps = 23/498 (4%)
Query: 13 HFTNSANSHKNSNTATKSHHHLPLLQKCT---HLVQFKQVHAQIIKASFDNRTISDTQLA 69
H +S NS+ HH+ +LQ C L +Q+H +++ + T+ T
Sbjct: 54 HIASSPNSY---------HHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLAT--- 101
Query: 70 KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP 129
KL++ + +A +F+ + + F +N +IR YA G IQLY M+ G++P
Sbjct: 102 KLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEP 161
Query: 130 DSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
D+FTYP+ LKAC L + + VH V+ + + + L+ Y G V A+ +
Sbjct: 162 DNFTYPLALKACAALLDLETGREVHERVLGTH-WGEDMFVCAGLVDMYAKCGCVDDARAV 220
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD++ ++ V W +MI + + E + L R M +GV TLVS +SA A+ A
Sbjct: 221 FDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAAL 280
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
G+ +H F + DKL +L DMYAK G+++ A +F+ ++++ + +WN++I G
Sbjct: 281 PRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGY 340
Query: 307 AIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
+HG +EA+K+F +M++ + PD++T + VL+AC+H G++++ KE F M Y ++P
Sbjct: 341 GMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKP 400
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAM 425
V+H+ CLVD+L A +EAY++I+ MPM+P++ +WG+LL C NVEL E+A+
Sbjct: 401 TVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIH---KNVELGELAL 457
Query: 426 ERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEF 485
++LI+LEP + GNYVL+SNIYA +W+ A ++R+LM R + K GCS IE+ H F
Sbjct: 458 QKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGF 517
Query: 486 MVGDGRHPCSEEIYSMLE 503
+VGD HP S EIY LE
Sbjct: 518 LVGDASHPRSAEIYEELE 535
>gi|356544269|ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 522
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 281/515 (54%), Gaps = 51/515 (9%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LL++C+ + + KQ+H I ++L + S + YAH +F+ I P+
Sbjct: 10 LLEQCSSMREMKQIHGHAITHGLARFAFISSKLL----AFYARSDLRYAHTLFSHIPFPN 65
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ-VKGVHSLV 154
F +NT+I ++ H + QM+ + P+S T+ +LL + +HS +
Sbjct: 66 LFDYNTIITAFSP----HYSSLFFIQMLNAAVSPNSRTFSLLLSKSSPSLPFLHQLHSHI 121
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT--------------- 199
++ + S + +T L+ Y N G ++A+ LFDQ KNV WT
Sbjct: 122 IR-RGHVSDFYVITSLLAAYSNHGSTRAARRLFDQSPYKNVACWTSLVTGYCNNGLVNDA 180
Query: 200 ------------------AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
AM++G+VK +REGI LFR+++D V+ N L SVLSACA
Sbjct: 181 RNLFDAIPERERNDVSYSAMVSGYVKNGCFREGIQLFRELKDRNVKPNNSLLASVLSACA 240
Query: 242 NLGASELGKWVHEFV--NKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
++GA E GKW+H +V NK+ +LG AL D Y KCG +E A RVF + K+V W
Sbjct: 241 SVGAFEEGKWIHAYVDQNKSQCYYELELGTALIDFYTKCGCVEPAQRVFGNMKTKDVAAW 300
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
++++ GLAI+ +EA+++F +M+ G +P+ VT I VLTAC+H L + ++F M
Sbjct: 301 SAMVLGLAINAKNQEALELFEEMEKVGPRPNAVTFIGVLTACNHKDLFGEALKLFGYMSD 360
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
Y + +++HYGC+VD+L R+ ++EA E I++M +EP+ V+WGSLL C + N+E
Sbjct: 361 KYGIVASIEHYGCVVDVLARSGKIEEALEFIKSMEVEPDGVIWGSLLNGCFLHN---NIE 417
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
L + L++LEP + G YVL+SN+YA +W+ + R+ MK+R + G S IEI+
Sbjct: 418 LGHKVGKYLVELEPGHGGRYVLLSNVYATMGKWEAVLETRKFMKDRGVPAVSGSSFIEIH 477
Query: 480 DVVHEFMVGDGRHPCSE---EIYSMLEYVAISLRE 511
VH+F+V D H C E+Y +L ++ L +
Sbjct: 478 QTVHKFLVHDNNHHCGSYPAEVYRVLNHLGNKLED 512
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 177/499 (35%), Positives = 296/499 (59%), Gaps = 19/499 (3%)
Query: 31 HHHLPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLV 87
H + L+ CTH L+ ++VH +++ FD T+L + S +S I A V
Sbjct: 71 HTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMY-SFFDS--IDNARKV 127
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC------ 141
F++ N + + +N + R + AG G + +Y +M G+ D FTY +LKAC
Sbjct: 128 FDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECF 187
Query: 142 -GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
L + + +H+ +++ ++ +H +T L+ Y FG V +A +F+QM KNVV+W+A
Sbjct: 188 VSLLNKGREIHAHILR-HGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSA 246
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEV--NELTLVSVLSACANLGASELGKWVHEFVNK 258
MI + K E ++LFR++ ++ N +T+VSVL ACA L A E G+ +H ++ +
Sbjct: 247 MIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILR 306
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+ + +AL MYA+CG +E RVF + +++V +WNS+I +HG G++A+ +
Sbjct: 307 KGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGI 366
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
F +M +G++P ++ ++VL ACSHAGL+++GK +F +M + + P+V+HY C+VDLL
Sbjct: 367 FEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLG 426
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGN 438
RA L+EA ++I NM +EP +WGSLL +C NVELAE A RL LEP N GN
Sbjct: 427 RANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIH---CNVELAERASIRLFDLEPTNAGN 483
Query: 439 YVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
YVL+++IYA WD ++++L++ R + K PG S IE+ ++ F+ D +P E++
Sbjct: 484 YVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQL 543
Query: 499 YSMLEYVAISLREECYAAR 517
+++L +++ L+EE Y +
Sbjct: 544 HALLVKLSMELKEEGYVPQ 562
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 234/355 (65%), Gaps = 10/355 (2%)
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
+N++IH Y G+V A+ +FD +++ +W++MI+ + K + +E ++L+R
Sbjct: 57 WNTMIHG-------YAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWR 109
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
+M + + + +TLVSV+SAC++LGA +G VH FV N I L+ KLG AL DMYAKCG
Sbjct: 110 EMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCG 169
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
IE A RVF + EK+V TW+S+I GLA HG G E++ +F +M G+KP+ VT + VL
Sbjct: 170 DIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLI 229
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
AC+H GL+ +GK+ F +M + +EP V+HYGC+VDLL R+ ++EA ++IR+M EP+
Sbjct: 230 ACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDT 289
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
++W +LL AC NVE+AE AM +L L+P DG+YVL+SNIYA W+ +MR
Sbjct: 290 IIWRALLGACRIH---KNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMR 346
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ ++ NI + PG S IE ++ +HEF+ GD HP S+EIY +LE + L++ Y
Sbjct: 347 KTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQAGY 401
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 124/258 (48%), Gaps = 7/258 (2%)
Query: 58 FDNRTISD-TQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD + D +I ++ A +F+ + F+++++I YA++ +
Sbjct: 46 FDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEAL 105
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITF 173
+L+ +M + PD T ++ AC DL + VH V+S + T LI
Sbjct: 106 ELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRF-VESNRIELDLKLGTALIDM 164
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y GD++SAQ +FD+M EK+V TW++MI G E + LF KM G++ N +T
Sbjct: 165 YAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTF 224
Query: 234 VSVLSACANLG-ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IV 291
V VL AC ++G SE K+ + I + + D+ + G++EEA ++ + +
Sbjct: 225 VGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMT 284
Query: 292 LEKNVCTWNSIIGGLAIH 309
E + W +++G IH
Sbjct: 285 FEPDTIIWRALLGACRIH 302
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 19/186 (10%)
Query: 49 VHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
V A++ + NR D +L LI+ I A VF+++ ++++I G A
Sbjct: 138 VGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLA 197
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL----------RQVKGVHSLVVKS 157
GLGH + L+++MI G+ P+ T+ +L AC + R + VH +
Sbjct: 198 NHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTV 257
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMINGHVKQKNYREGID 216
+ + ++ L R G V+ A+ L MT E + + W A++ KN +
Sbjct: 258 EHYGCMVDLLGR-------SGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEE 310
Query: 217 LFRKMR 222
K+R
Sbjct: 311 AMAKLR 316
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 272/451 (60%), Gaps = 15/451 (3%)
Query: 37 LQKCTHLVQFKQVHAQIIKAS--FDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINP 94
L C ++ Q KQ+HA I S ++N T+++ KL+ V+ + A+ +F+++
Sbjct: 1089 LLNCKNICQIKQLHALITTNSVLYNNLTVAN----KLLYVYVHHKCLTDAYALFDEMPQK 1144
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVH 151
+ +++ +I G+ + G + + + ++I NG+ PD++T P ++KAC D L + +H
Sbjct: 1145 NPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDMGRLIH 1204
Query: 152 SLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
+V+K + + L+ Y ++ A+LLFD M K++VTWT MI G+ + N
Sbjct: 1205 CVVLKYGLHLDHFV--CAALVDMYAKCKVIEDAKLLFDVMPSKDLVTWTVMIGGYAECGN 1262
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
+E + LF +R+ G +++ +VS+++ACA LGA ++VHE+VN+N L+ LG A
Sbjct: 1263 AKESLVLFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEYVNRNRFSLDVILGTA 1322
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
+ DMYAKCG ++ A +F + KNV +W+++I HG G++A+++F M SGI P+
Sbjct: 1323 MIDMYAKCGDVDSAREIFDNMHHKNVISWSAMIAAYGYHGQGKKALELFPMMLSSGILPN 1382
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
++T +++L ACSHAGL+E G + M + V P++KH+ C+VDLL RA L EA+ I
Sbjct: 1383 NITFVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLLGRAGQLTEAFRFI 1442
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
NM +E + LW SLL AC ++LAE A + L++L+P N GNY+L+SNIYA
Sbjct: 1443 ENMTVEKDEGLWSSLLGACRI---HKRIDLAEKAAKSLLELQPQNPGNYILLSNIYANAG 1499
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
QW D K+R LM +R + K PG + IE+ +
Sbjct: 1500 QWKDVAKIRDLMTKRKLKKIPGYTWIELKSI 1530
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 174/516 (33%), Positives = 271/516 (52%), Gaps = 51/516 (9%)
Query: 22 KNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASF----DNRTISDTQLAKLIESLVN 77
+ NT + + ++++C L Q QVHA I + ++ T + +L+
Sbjct: 7 SDGNTIVNTSEAITVIRQCKSLKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTALLP 66
Query: 78 SSQ---------IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD 128
++ YA VFN+I NPSTF +NT+IR + + ++ +M +
Sbjct: 67 TTNASPTTPAALTGYALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVP 126
Query: 129 PDSFTYPILLKACGDLRQVKGVHSLVVKSKDF---------NSVIH-------------- 165
PD+ T+P LKAC L + +L ++ F N++IH
Sbjct: 127 PDTHTFPFCLKACSLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQV 186
Query: 166 ----------SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY-REG 214
S LI + GD A+ LFD+M ++ V+W ++ G+ + + +
Sbjct: 187 FNETSLKDVVSYNALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDA 246
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
I LF +M S V + + LVS LSACA LG E GK +H ++ +N I +N L L D+
Sbjct: 247 IQLFNRMLISTVRPDNIALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDL 306
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
YAKCG IE A +F+ +KN+ TWN+++ GL +HG G ++ F +M +GIKPD V+
Sbjct: 307 YAKCGCIETAREIFESSPDKNLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSF 366
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+ +L C HAGL+ + + F M Y+V +KHYGC+ DLL RA L+ EA E+I MP
Sbjct: 367 LGILVGCGHAGLVCEARNFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMP 426
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
M + +WG +L C NVE+AE A E ++ L P +DG Y +M++IYA +W+D
Sbjct: 427 MGGDVFVWGGVLGGCRIH---GNVEIAEKAAENVMALNPEDDGVYSIMADIYANAGRWED 483
Query: 455 AGKMRRLMKERNIVKNPGCSVIEIND-VVHEFMVGD 489
++RRLM R + KNPGCS++++N+ V H F+ G
Sbjct: 484 VARIRRLMHSRQVKKNPGCSLVQLNNGVFHGFVAGS 519
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 232/355 (65%), Gaps = 10/355 (2%)
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
+N++IH Y GDV A+ +FD +++ +W++MI+ + K + +E ++L+R
Sbjct: 150 WNTMIHG-------YAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWR 202
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
+MR +GV + +++VSVLSAC+ +GA +G VH FV N + ++ KLG AL DMYAKCG
Sbjct: 203 EMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCG 262
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
IE +L+VF + K+V TW+S+I GLA HG G +A+ +F +M G++P+++T I VL
Sbjct: 263 DIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLI 322
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
AC+H GL+ GK+ F +M + V P ++HYGC+VDLL RA ++EA E+IR+M +P+
Sbjct: 323 ACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDP 382
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
++W +LL AC NVE+AE AM +L L+P DG+YVL+SNIYA W+ +MR
Sbjct: 383 IIWRTLLGACRIHK---NVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMR 439
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ ++ NI + PG S IE + VHEF+ GD HP EEIY MLE + LR+ Y
Sbjct: 440 KTIRRENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEEMMDRLRQAGY 494
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 117/244 (47%), Gaps = 6/244 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I + A +F+ + F+++++I YA+ ++L+ +M G+ PD
Sbjct: 153 MIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPD 212
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
+ +L AC G L VH V+S + T L+ Y GD++++ +F
Sbjct: 213 CISMVSVLSACSAMGALAIGAEVHRF-VESNRVEVDMKLGTALVDMYAKCGDIENSLKVF 271
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
M K+V+TW++MI G + + LF +M G++ NE+T + VL AC ++G
Sbjct: 272 HAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVN 331
Query: 248 LG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGG 305
G K+ + + ++ + + D+ + G++EEA+ + + + + + W +++G
Sbjct: 332 DGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGA 391
Query: 306 LAIH 309
IH
Sbjct: 392 CRIH 395
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQII 92
+ +L C+ + + A++ + NR D +L L++ I + VF+ +
Sbjct: 217 VSVLSACSAMGAL-AIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMP 275
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHS 152
++++I G A GLGH + L+++MI GL P+ T+ +L AC + V
Sbjct: 276 VKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKK 335
Query: 153 LVVKSKDFNSVIHSLTR---LITFYCNFGDVKSAQLLFDQMTEK-NVVTWTAMINGHVKQ 208
D + V+ + ++ G V+ A L MT K + + W ++
Sbjct: 336 YFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIH 395
Query: 209 KN 210
KN
Sbjct: 396 KN 397
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 261/424 (61%), Gaps = 9/424 (2%)
Query: 94 PSTFAFNTVIRGYAEAGLG-HRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHS 152
P+ + F V + GLG G Q+ I GL+ + F +++ + V
Sbjct: 30 PNRYTFVFVFKACGN-GLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARR 88
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
+ S D + ++S +I Y G++ A+ +FD+M+E++VV+WT +I G+V+ ++
Sbjct: 89 VFDWSLDQD--LYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFK 146
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E +DLF +M +G NE TL S L+ACANL A + G+W+H +++K+ I +N++L A+L
Sbjct: 147 EALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLL 206
Query: 273 DMYAKCGYIEEALRVF--KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
DMYAKCG I+ A +VF + L+ V WN++IGG A+HG +EA+ +F QM++ + P+
Sbjct: 207 DMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPN 266
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
VT +A+L ACSH L+E+G+ F +M Y +EP ++HYGC+VDLL R+ LL EA E +
Sbjct: 267 KVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETV 326
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
NMPM P+A +WG+LL AC D +E + + + +L+ + G +VL++N+Y+A
Sbjct: 327 FNMPMAPDATIWGALLGACRIHKD---IERGQRIGKIIKELDSDHIGCHVLLANLYSASG 383
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
QWD+A +R+ ++ K PGCS IE+N V H+F+VGD HP ++++Y L+ + L+
Sbjct: 384 QWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLK 443
Query: 511 EECY 514
Y
Sbjct: 444 NAGY 447
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 119/247 (48%), Gaps = 10/247 (4%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I V S +I A +F+++ ++ T+I GY + G + L+ +M+ G P+
Sbjct: 104 MIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPN 163
Query: 131 SFTYPILLKACGD---LRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVK-SAQL 185
FT L AC + L Q + +H + KS+ N + L L+ Y G++ +A++
Sbjct: 164 EFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERL--LASLLDMYAKCGEIDFAAKV 221
Query: 186 LFDQMTEK-NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
D+ K V W AMI G+ +E IDLF +M+ V N++T V++L+AC++
Sbjct: 222 FHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGK 281
Query: 245 ASELGK-WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR-VFKIVLEKNVCTWNSI 302
E G+ + + I + + D+ + G ++EA VF + + + W ++
Sbjct: 282 LVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGAL 341
Query: 303 IGGLAIH 309
+G IH
Sbjct: 342 LGACRIH 348
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 176/475 (37%), Positives = 271/475 (57%), Gaps = 17/475 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
++VH K F + + T L I+ + A+ VF ++ + + +I GY
Sbjct: 130 EEVHCCATKHGFKSNSFVATSL---IDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGY 186
Query: 107 AEAGLGHRGIQLYTQMIGNGLDP--DSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVI 164
G G +L+ L P D + +L+ + + + L K + +++
Sbjct: 187 ILCGDVVSGRRLFD------LAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTM- 239
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
S ++ Y G+V+ + +FD+M E+NV +W +I G+VK + E ++ F++M
Sbjct: 240 -SWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVE 298
Query: 225 G-VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
G V N+ TLV+VLSAC+ LGA ++GKWVH + N +G L DMYAKCG IE
Sbjct: 299 GHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIEN 358
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A+ VF + K++ +WN+II GLAIHG +A+ MF +M+ G +PD VT + +L+AC+H
Sbjct: 359 AVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTH 418
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
GL++ G F +M Y + P ++HYGC+VDLL RA LLD+A IR MP+EP+AV+W
Sbjct: 419 MGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWA 478
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL AC NVE+AE+A++RLI+LEP N N+V++SNIY + +D +++ M+
Sbjct: 479 ALLGACRLY---KNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMR 535
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
+ K PGCSVIE ND V EF D RH +E IY +L+ + + LR Y +
Sbjct: 536 DTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYRVLKGLTMLLRSHGYVPNL 590
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 189/382 (49%), Gaps = 20/382 (5%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
+ LL+ C + + Q+ AQI+ ++ +D I + +I +A +F++I
Sbjct: 16 ITLLRSCKNYERLHQIQAQIVTHGLEH---NDFVAPNFITTCSRFKRIHHARKLFDKIPQ 72
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGV 150
P+T +N + RGY + G + L+ ++ P+ FT+P+++K+CG L R+ + V
Sbjct: 73 PNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEV 132
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H K F S T LI Y G V+ A +F +M E+NVV WTA+ING++ +
Sbjct: 133 HCCATK-HGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGD 191
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
G LF + V + + + + + A EL + N++ + N A
Sbjct: 192 VVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAAREL---FDKMPNRDTMSWN-----A 243
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKP 329
+ + YA G +E +VF + E+NV +WN +IGG +G E ++ F +M + G + P
Sbjct: 244 MLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIP 303
Query: 330 DDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
+D TL+AVL+ACS G ++ GK + Y YK N+ L+D+ + +++ A
Sbjct: 304 NDFTLVAVLSACSRLGALDMGKWVHVYAESIGYK--GNLFVGNVLIDMYAKCGVIENAV- 360
Query: 389 VIRNMPMEPNAVLWGSLLTACA 410
V+ N + + W +++ A
Sbjct: 361 VVFNCLDRKDIISWNTIINGLA 382
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 265/447 (59%), Gaps = 7/447 (1%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I L+ + A +F + + + + T++ G+ + GL ++++ +M G+ D
Sbjct: 212 MITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAID 271
Query: 131 SFTYPILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
+T+ +L ACG L Q K +H+ +++++ ++ + + L+ Y +K A+ +F
Sbjct: 272 QYTFGSILTACGALSALEQGKQIHAYIIRTR-YDDNVFVGSALVDMYSKCRSIKLAETVF 330
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+MT KN+++WTA+I G+ + E + +F +M+ G++ ++ TL SV+S+CANL + E
Sbjct: 331 RRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLE 390
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
G H + ++ + AL +Y KCG IE+A R+F + + +W +++ G A
Sbjct: 391 EGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYA 450
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
G +E + +F +M G+KPD VT I VL+ACS AG +EKG+ F++M++D+ + P
Sbjct: 451 QFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPID 510
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
HY C++DL R+ L EA E I+ MPM P+A+ WG+LL+AC D +E+ + A E
Sbjct: 511 DHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGD---MEIGKWAAEN 567
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L++++P N +YVL+ +++AAK QW++ ++RR M++R + K PGCS I+ + VH F
Sbjct: 568 LLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSA 627
Query: 488 GDGRHPCSEEIYSMLEYVAISLREECY 514
D HPCS+ IY LE++ + EE Y
Sbjct: 628 DDQSHPCSKGIYEKLEWLNSKMLEEGY 654
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 181/342 (52%), Gaps = 26/342 (7%)
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHR--GIQLYTQMIGNGLDPDSFTYPIL 137
++ A L + + PS +T++ A + LG R G Q + Q++ G ++F L
Sbjct: 124 RVYLALLQADSSVRPSRITMSTMV--MAASALGDRALGKQFHCQILRLGFGANAFVGSPL 181
Query: 138 LKACGDLRQVKGVHSLV--VKSKD---FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
+ + V V SK+ +N++I L R C V+ A+ LF+ MT+
Sbjct: 182 VDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLR-----CKM--VEEARRLFEVMTD 234
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
++ +TWT M+ G + E +++FR+MR G+ +++ T S+L+AC L A E GK +
Sbjct: 235 RDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQI 294
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG 312
H ++ + N +G+AL DMY+KC I+ A VF+ + KN+ +W ++I G +GC
Sbjct: 295 HAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCS 354
Query: 313 EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY-- 370
EEAV++F +MQ GI PDD TL +V+++C++ +E+G + F+ + + + HY
Sbjct: 355 EEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQ-FHCL----ALVSGLMHYIT 409
Query: 371 --GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
LV L + +++A+ + M + V W +L++ A
Sbjct: 410 VSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVSGYA 450
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 142/276 (51%), Gaps = 15/276 (5%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
L Q KQ+HA II+ +D+ + L++ I A VF ++ + ++ +
Sbjct: 288 LEQGKQIHAYIIRTRYDDNVFVGS---ALVDMYSKCRSIKLAETVFRRMTCKNIISWTAL 344
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKD 159
I GY + G ++++++M +G+DPD +T ++ +C +L ++ H L + S
Sbjct: 345 IVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVS-- 402
Query: 160 FNSVIHSLT---RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID 216
++H +T L+T Y G ++ A LFD+M+ + V+WTA+++G+ + +E ID
Sbjct: 403 --GLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETID 460
Query: 217 LFRKMRDSGVEVNELTLVSVLSACANLGASELGK-WVHEFVNKNCIILNDKLGAALTDMY 275
LF KM GV+ + +T + VLSAC+ G E G+ + H + I+ D + D+Y
Sbjct: 461 LFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLY 520
Query: 276 AKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHG 310
++ G ++EA K + + + W +++ + G
Sbjct: 521 SRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 157/349 (44%), Gaps = 74/349 (21%)
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSL 153
P T+ N ++ Y +AG R +++ M P+ FTY LL
Sbjct: 39 PPTYLLNHLLTAYGKAGRHARARRVFDAMP----HPNLFTYNALL--------------- 79
Query: 154 VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYRE 213
+++ H+ RL++ + LF MT++++V++ A+I G ++ +
Sbjct: 80 -------STLAHA--RLLS---------DMEALFASMTQRDIVSYNAVIAGFSGGGSHAQ 121
Query: 214 GIDLFRKM--RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
+ ++ + DS V + +T+ +++ A + LG LGK H + + N +G+ L
Sbjct: 122 AVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPL 181
Query: 272 TDMYAK-------------------------------CGYIEEALRVFKIVLEKNVCTWN 300
DMYAK C +EEA R+F+++ +++ TW
Sbjct: 182 VDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWT 241
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRR 359
+++ G +G EA+++F +M+ GI D T ++LTAC +E+GK+I Y +R
Sbjct: 242 TMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT 301
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
Y + NV LVD+ + R + A V R M + N + W +L+
Sbjct: 302 RY--DDNVFVGSALVDMYSKCRSIKLAETVFRRMTCK-NIISWTALIVG 347
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 266/473 (56%), Gaps = 11/473 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+ VH+ +KA F D L++ + A VF ++ + S ++ ++I GY
Sbjct: 165 RAVHSIGVKACFSRE---DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGY 221
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR---QVKGVHSLVVKSKDFNSV 163
A GL ++L+ +M G+ PD +T +L C R + K VH + K D
Sbjct: 222 AREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI-KENDLGFD 280
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-R 222
I L+ Y G ++ A+L+F +M K++++W +I G+ K E + LF +
Sbjct: 281 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 340
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ +E T+ VL ACA+L A + G+ +H ++ +N + + +L DMYAKCG +
Sbjct: 341 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 400
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A +F + K++ +W +I G +HG G+EA+ +F QM+ +GI+ D+++ +++L ACS
Sbjct: 401 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 460
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
H+GL+++G F MR + K+EP V+HY C+VD+L R L +AY I NMP+ P+A +W
Sbjct: 461 HSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIW 520
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL C D V+LAE E++ +LEP N G YVLM+NIYA +W+ ++R+ +
Sbjct: 521 GALLCGCRIHHD---VKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRI 577
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
+R + KNPGCS IEI V+ F+ GD +P +E I + L V + EE Y+
Sbjct: 578 GQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYS 630
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 188/344 (54%), Gaps = 13/344 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+Q+H I+K+ F R L + + ++ A VF+++ ++N++I GY
Sbjct: 64 EQLHGFILKSGFGERNSVGNSLVAF---YLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSV 163
GL +G+ ++ QM+ +G++ D T + C D R + + VHS+ VK+ F+
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC-FSRE 179
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
L+ Y GD+ SA+ +F +M++++VV++T+MI G+ ++ E + LF +M +
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
G+ + T+ +VL+ CA + GK VHE++ +N + + + AL DMYAKCG ++E
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 299
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF-WQMQMSGIKPDDVTLIAVLTACS 342
A VF + K++ +WN+IIGG + + EA+ +F ++ PD+ T+ VL AC+
Sbjct: 300 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 359
Query: 343 HAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLL--CRARLL 383
+KG+EI Y MR Y + +V + LVD+ C A LL
Sbjct: 360 SLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLL 401
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 183/324 (56%), Gaps = 10/324 (3%)
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV 147
F+++ +N ++ A++G I L+ +M+ +G++ DS+T+ + K+ LR V
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 148 KG---VHSLVVKSK--DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
G +H ++KS + NSV +SL + FY V SA+ +FD+MTE++V++W ++I
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSL---VAFYLKNQRVDSARKVFDEMTERDVISWNSII 117
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
NG+V +G+ +F +M SG+E++ T+VSV + CA+ LG+ VH K C
Sbjct: 118 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 177
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
D+ L DMY+KCG ++ A VF+ + +++V ++ S+I G A G EAVK+F +M
Sbjct: 178 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 237
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
+ GI PD T+ AVL C+ L+++GK + + ++ + ++ L+D+ +
Sbjct: 238 EEEGISPDVYTVTAVLNCCARYRLLDEGKRV-HEWIKENDLGFDIFVSNALMDMYAKCGS 296
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLL 406
+ EA V M ++ + + W +++
Sbjct: 297 MQEAELVFSEMRVK-DIISWNTII 319
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/487 (34%), Positives = 281/487 (57%), Gaps = 22/487 (4%)
Query: 40 CTHLVQFKQV---HAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
C +L + + H ++ K DN + ++ + A VF++I
Sbjct: 127 CANLEEIRMARLAHCEVFKLGLDN---DHHTVNSMVTMYFRCGENGVARKVFDEITEKDL 183
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKACGDL------RQVKG 149
++N+++ GYA+ G ++++ ++ +G +PD + +L ACG+L R V+G
Sbjct: 184 VSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEG 243
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+V + NS I S LI+ Y G++ S++ +FD M ++ +TW A I+ + +
Sbjct: 244 F--VVERGMKVNSYIGS--ALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNG 299
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E I LF M+++GV+ N++TL +VLSACA++GA +LGK + E+ + + +
Sbjct: 300 MADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVAT 359
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG--I 327
AL DMYAKCG +E A RVF + KN +WN++I LA HG +EA+ +F +M G
Sbjct: 360 ALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSA 419
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
+P+D+T +++L+AC HAGL+++G +F M + + P ++HY C+VDLL RA L EA+
Sbjct: 420 RPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAW 479
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
+VI MP +P+ V G+L +AC NV++ E ++ L++L+P N GNY++ S IY
Sbjct: 480 DVIEKMPEKPDNVTLGALHSACQRK---KNVDIGERVIQMLLELDPSNSGNYIISSKIYE 536
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
WDDA +MR LM+E + K PGCS IE+ + + EF+ GDG S ++ ++++ +
Sbjct: 537 NLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGLTLDSIDVRNIIDLLYE 596
Query: 508 SLREECY 514
L++E Y
Sbjct: 597 ELKKEGY 603
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 221/409 (54%), Gaps = 30/409 (7%)
Query: 19 NSHKNSNTATKSHHHLP------LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLI 72
+ HK T + +H P LL++C +Q+H Q S L+
Sbjct: 4 SKHKIFKTINTNTNHSPIFLLLSLLKQCPSTKTLQQIHTQFTIHSIHKPN-------HLL 56
Query: 73 ESLVNSSQIAYAHLVFNQII-NPSTFAFNTVIRGYAEAGLGHR-GIQLYTQMIGNGLDPD 130
++ Y+ L+F+ I +P+ +AFN ++R + + LY QM + P+
Sbjct: 57 SQSISLKDFTYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPN 116
Query: 131 SFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
+FT+P + AC +L +++ H V K ++ H++ ++T Y G+ A+ +F
Sbjct: 117 NFTFPFVFLACANLEEIRMARLAHCEVFK-LGLDNDHHTVNSMVTMYFRCGENGVARKVF 175
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR-DSGVEVNELTLVSVLSACANLGAS 246
D++TEK++V+W ++++G+ K RE +++F ++R +SG E +E++LVSVL AC LG
Sbjct: 176 DEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDL 235
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
ELG+WV FV + + +N +G+AL MY+KCG + + R+F + ++ TWN+ I
Sbjct: 236 ELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAY 295
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
A +G +EA+ +F M+ +G+ P+ VTL AVL+AC+ G ++ GK++ +Y
Sbjct: 296 AQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQM-----DEYATHRG 350
Query: 367 VKH----YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
++H L+D+ + L+ A V +MP + +A W ++++A AS
Sbjct: 351 LQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDAS-WNAMISALAS 398
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 282/534 (52%), Gaps = 56/534 (10%)
Query: 31 HHHLP-LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL 86
H P + + C+ L + K V+ ++ F+ + +++ + ++ A
Sbjct: 111 HFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVK---GSILDMFIKCGRMDIARR 167
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL-- 144
F +I F +N ++ GY G + + ++ +M+ G+ P+S T + AC +L
Sbjct: 168 FFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSL 227
Query: 145 -RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN----------FGDVKSAQLL------- 186
R + +H +K ++ +S + L+ +Y FG +K L+
Sbjct: 228 LRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLA 287
Query: 187 --------------------------FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
F +++ ++VV W ++I+ + +DL R+
Sbjct: 288 VTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLRE 347
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M S VEVN +T+VS L AC+ L A GK +H+F+ + + + + +L DMY +CG
Sbjct: 348 MNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGS 407
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
I+++ R+F ++ ++++ +WN +I +HG G +AV +F Q + G+KP+ +T +L+A
Sbjct: 408 IQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSA 467
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
CSH+GLIE+G + F M+ +Y ++P V+ Y C+VDLL RA +E E I MP EPNA
Sbjct: 468 CSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAA 527
Query: 401 LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRR 460
+WGSLL AC N +LAE A L +LEP + GNYVLM+NIY+A +W+DA K+R
Sbjct: 528 VWGSLLGACRIH---CNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRC 584
Query: 461 LMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
LMKER + K PGCS IE+ +H F+VGD HP E+I + +E + ++E Y
Sbjct: 585 LMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGY 638
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 212/462 (45%), Gaps = 89/462 (19%)
Query: 33 HLPLLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
+ +LQKC L + QVHAQ++ D + + ++L+E + + A +F+
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVD---VCEFLGSRLLEVYCQTGCVEDARRMFD 69
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-- 147
++ + F++ ++ Y G I+L+ M+ G+ PD F +P + KAC +L+
Sbjct: 70 KMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRV 129
Query: 148 -KGVHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
K V+ ++ + NS + ++ + G + A+ F+++ K+V W M++G+
Sbjct: 130 GKDVYDYMLSIGFEGNSCVKG--SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGY 187
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ +++ +++FRKM GV+ N +T+ S +SAC NL G+ +H + K + +D
Sbjct: 188 TSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSD 247
Query: 266 KL-GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG--GLAIHGCGEEAVKMF--- 319
L G +L D YAKC +E A R F ++ + ++ +WN+++ G +G G+ A++ F
Sbjct: 248 LLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRM 307
Query: 320 -----------------W---------------------QMQMSGIKPDDVTLIAVLTAC 341
W +M +S ++ + VT+++ L AC
Sbjct: 308 HIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPAC 367
Query: 342 SHAGLIEKGKEIFYNMRR------DYKVEPNVKHYG-C--------LVDLLCRARLLD-- 384
S + +GKEI + R ++ + + YG C + DL+ + L+
Sbjct: 368 SKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWN 427
Query: 385 ----------------EAYEVIRNMPMEPNAVLWGSLLTACA 410
++ R M ++PN + + +LL+AC+
Sbjct: 428 VMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACS 469
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 187/391 (47%), Gaps = 24/391 (6%)
Query: 134 YPILLKACGDLRQVK---GVHS-LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
Y +L+ C L ++ VH+ LVV D + S RL+ YC G V+ A+ +FD+
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGS--RLLEVYCQTGCVEDARRMFDK 70
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
M+E+NV +WTA++ + +Y E I LF M + GV + V AC+ L +G
Sbjct: 71 MSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 130
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
K V++++ N + ++ DM+ KCG ++ A R F+ + K+V WN ++ G
Sbjct: 131 KDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSK 190
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
G ++A+ +F +M + G+KP+ +T+ + ++AC++ L+ G+EI + +++ ++
Sbjct: 191 GEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLV 250
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
LVD + R ++ A M + + V W ++L G E I
Sbjct: 251 GNSLVDYYAKCRSVEVARRKF-GMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHI 309
Query: 430 KLEPFND---GNYVLMSNIYAAKAQWDDAGKMRRLMKERN-----------IVKNPGCS- 474
F++ + V+ ++I +A AQ + L++E N + P CS
Sbjct: 310 ACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSK 369
Query: 475 --VIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
+ +H+F++ G C+ + S+++
Sbjct: 370 LAALRQGKEIHQFIIRCGLDTCNFILNSLID 400
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 6/126 (4%)
Query: 16 NSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL 75
N +N N+ T + LP K L Q K++H II+ D + L LI+
Sbjct: 349 NLSNVEVNTVTMVSA---LPACSKLAALRQGKEIHQFIIRCGLDT---CNFILNSLIDMY 402
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYP 135
I + +F+ + ++N +I Y G G + L+ Q GL P+ T+
Sbjct: 403 GRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFT 462
Query: 136 ILLKAC 141
LL AC
Sbjct: 463 NLLSAC 468
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 271/475 (57%), Gaps = 12/475 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+ +H I K F++ + LI + S + + VF + NP ++N ++ G+
Sbjct: 172 QSIHGCICKYGFESDNLVSN---PLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGF 228
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVK-SKDFNS 162
++ RG +++ QM+ G P+ FT+ +L++C L K VH+ ++K S D +
Sbjct: 229 YDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDD 288
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ T L+ Y ++ A + FD++ +++ +WT +I+G+ + + + FR+M+
Sbjct: 289 FVG--TALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQ 346
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
G++ NE TL S LS C+++ E G+ +H K + +G+AL D+Y KCG +E
Sbjct: 347 REGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCME 406
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A +FK ++ +++ +WN+II G + HG GE+A++ F M GI PD+ T I VL+ACS
Sbjct: 407 HAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACS 466
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
GL+E+GK+ F +M + Y + P+++HY C+VD+L RA +E I M + P +++W
Sbjct: 467 FMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIW 526
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
++L AC NV+ E A ++L ++EP D +Y+L+SNI+A+K +WDD +R LM
Sbjct: 527 ETVLGACKLH---GNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALM 583
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
R I K PGCS +E++ VH F+ DG HP EIY+ L+ + SL Y +
Sbjct: 584 TSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPK 638
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 166/338 (49%), Gaps = 18/338 (5%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GD 143
VF +I NP A++ +I G + G G +L+ M G P+ FT L+ GD
Sbjct: 108 VFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGD 167
Query: 144 LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
LR + +H + K F S LI Y V+ +F+ MT ++V+W A+++
Sbjct: 168 LRYGQSIHGCICKY-GFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLS 226
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
G + G +F +M G + N T +SVL +C++L E GK VH + KN
Sbjct: 227 GFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDD 286
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+D +G AL DMYAK +E+A F ++ +++ +W II G A E+AVK F QMQ
Sbjct: 287 DDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQ 346
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG------CLVDLL 377
GIKP++ TL + L+ CSH +E G+++ + V H+G LVDL
Sbjct: 347 REGIKPNEYTLASCLSGCSHMATLENGRQL-------HAVAVKAGHFGDIFVGSALVDLY 399
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+ ++ A + + + + + V W ++++ + G
Sbjct: 400 GKCGCMEHAEAIFKGL-ISRDIVSWNTIISGYSQHGQG 436
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 178/366 (48%), Gaps = 16/366 (4%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-- 141
A +F + + ++N ++ GYA+ G G + ++L+ +M FT +LK C
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 142 -GDLRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
G LR+ K +H+L ++S + + + L+ Y G V A +F ++ +VV W+
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLG--CSLVDMYSKCGTVYDALKVFTKIRNPDVVAWS 121
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
AMI G +Q + +E +LF MR G N+ TL S++S N+G G+ +H + K
Sbjct: 122 AMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKY 181
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
++ + L MY K +E+ +VF+ + ++ +WN+++ G ++F
Sbjct: 182 GFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIF 241
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
+QM + G KP+ T I+VL +CS E GK++ ++ ++ + + LVD+ +
Sbjct: 242 YQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTA-LVDMYAK 300
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME--RLIKLEPFNDG 437
AR L++A V + + + W +++ A D AE A++ R ++ E
Sbjct: 301 ARCLEDA-GVAFDRLVNRDIFSWTVIISGYAQTDQ------AEKAVKYFRQMQREGIKPN 353
Query: 438 NYVLMS 443
Y L S
Sbjct: 354 EYTLAS 359
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
+E A R+F + EKN +WN+++ G A G G++ +K+F +M+ K TL VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 341 CSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGC-LVDLLCRARLLDEAYEV---IRNMPM 395
C++ G + +GK + +R +++ + GC LVD+ + + +A +V IRN
Sbjct: 61 CANTGSLREGKVLHALALRSGCEID---EFLGCSLVDMYSKCGTVYDALKVFTKIRN--- 114
Query: 396 EPNAVLWGSLLTA 408
P+ V W +++T
Sbjct: 115 -PDVVAWSAMITG 126
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/452 (35%), Positives = 256/452 (56%), Gaps = 36/452 (7%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
L+ V S++I A +F+++ S ++ T++ GY + G ++L+ QM + PD
Sbjct: 308 LVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPD 367
Query: 131 SFTYPILLKACGDLRQV---KGVHSLVV-------------------KSKDFNSVIHSLT 168
+L AC L + VH+ +V K + + +
Sbjct: 368 EVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFE 427
Query: 169 RL-----------ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
+L + +C G V A+ F+++ EK++V+W M+N +VK + E ++
Sbjct: 428 QLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEI 487
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
F KM+ S V+ ++ TL+S+LS+CA +GA G WV+ ++ KN I ++ LG AL DMY K
Sbjct: 488 FCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGK 547
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG +E A +F ++EKNV W +++ A+ G EA+ ++ +M+ G+KPD VT IA+
Sbjct: 548 CGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIAL 607
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
L ACSH GL+++G + F +R Y + P + HYGC+VDLL R L+E + I MP+EP
Sbjct: 608 LAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEP 667
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
+ +W SL+ AC S NVELAE A ++LI+++P N+G +VL+SNIYA +WDD K
Sbjct: 668 DVSIWSSLMRACRSHH---NVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSK 724
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGD 489
+R + E + K PG ++IE N VVHEF+ +
Sbjct: 725 VRTKLHETGVPKQPGFTMIEQNGVVHEFVASN 756
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 215/445 (48%), Gaps = 73/445 (16%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
+VH +I+K F + L L ++ +F ++ + ++NT+I Y
Sbjct: 154 EVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQ---LFEKMTHRDVISWNTMISCYV 210
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDF--NS 162
G+ + L+ +M+ +G+ PD T L+ C DL K +H +V +K + S
Sbjct: 211 LKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGS 270
Query: 163 VIHSL------------------------------TRLITFYCNFGDVKSAQLLFDQMTE 192
+++ L T L++ Y + A+ LFD+M E
Sbjct: 271 LLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNE 330
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
+++V+WT M++G+V+ Y E ++LF++MR V +E+ LV+VLSAC +L +LG+ V
Sbjct: 331 RSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSV 390
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK----------------------- 289
H F+ ++++ LG AL D+YAKCG ++EALR F+
Sbjct: 391 HAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGV 450
Query: 290 --------IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
+ EK++ +WN+++ H E+ ++F +MQ S +KPD TLI++L++C
Sbjct: 451 DKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSC 510
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
+ G + G + + ++ ++ + L+D+ + ++ AYE+ + +E N +
Sbjct: 511 AKVGALNHGIWVNVYIEKN-EIGIDAMLGTALIDMYGKCGCVEMAYEIFTQI-IEKNVFV 568
Query: 402 WGSLLTACASADDGANVELAEIAME 426
W +++ A A +G +E ++ +E
Sbjct: 569 WTAMMAAYAM--EGQALEAIDLYLE 591
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 211/432 (48%), Gaps = 64/432 (14%)
Query: 22 KNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQ 80
K S++ + H + LL+ C+++ +F +HA +I A+ I D ++ ++++ L++ +
Sbjct: 27 KTSHSVLRPHWIIDLLKSCSNIREFSPIHAHLITANL----IHDPEITSQVLAFLLSVNN 82
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
+ AH + + P + +NT++ + G ++ Y M+ G+ D T+ L+ A
Sbjct: 83 LDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHA 142
Query: 141 CG---DLRQVKGVHSLVVK-----SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
C D++ VH ++K +K N+ L+ Y G +K LF++MT
Sbjct: 143 CCKNFDVKLGSEVHGRILKCGFGRNKSLNN------NLMGLYSKCGKLKEVCQLFEKMTH 196
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
++V++W MI+ +V + YRE +DLF +M SGV +E+T+VS++S CA L E+GK +
Sbjct: 197 RDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRL 256
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEE----------------------------- 283
H ++ N + + L L DMY+KCG ++E
Sbjct: 257 HLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSN 316
Query: 284 ----ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
A ++F + E+++ +W +++ G G E++++F QM+ + PD+V L+ VL+
Sbjct: 317 KIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLS 376
Query: 340 ACSHAGLIEKGKEIF-----YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
AC H + G+ + Y M D + L+DL + LDEA +P
Sbjct: 377 ACVHLEDFDLGRSVHAFIVTYGMLVDGFLG------NALLDLYAKCGKLDEALRTFEQLP 430
Query: 395 MEPNAVLWGSLL 406
+ +A W S+L
Sbjct: 431 CK-SAASWNSML 441
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 259/424 (61%), Gaps = 21/424 (4%)
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSL 153
F ++ YA+AG L D F ++L A G++ + + V
Sbjct: 76 FVRTALVEAYAKAGRA----DLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFD- 130
Query: 154 VVKSKD---FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
++ +D +N++IH Y G+V A+ +F+ M +++ +W++M++ + K +
Sbjct: 131 GMRERDMVSWNTMIHG-------YAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRR 183
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
++ ++L+R+MR + V + T+VSVLSAC+++GA +G VH+FV N + L+ KLG A
Sbjct: 184 SKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTA 243
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMYAKCG IE ++RVF + K+V TW+S+I GLA HG G +A+ +F +M G++P+
Sbjct: 244 LIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPN 303
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+VT I VL +C+H GL+ GK+ F +M + V P V+HYGC+VDLL R+ ++EA ++I
Sbjct: 304 EVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLI 363
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
R+MP EP+AV+W +LL AC NVE+AE AM +L L+P DG+YVL+SNIYA
Sbjct: 364 RDMPFEPDAVIWRALLGACRIYK---NVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQAN 420
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
W+ +MRR ++ I + PG S IE + +HEF+ GD HP S+EIY ML + LR
Sbjct: 421 SWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLR 480
Query: 511 EECY 514
+ Y
Sbjct: 481 QAGY 484
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 119/244 (48%), Gaps = 6/244 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I + ++ A VFN + + F++++++ Y + ++L+ +M ++PD
Sbjct: 143 MIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPD 202
Query: 131 SFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T +L AC D+ + VH V+S + T LI Y GD++++ +F
Sbjct: 203 CTTMVSVLSACSDMGALAVGAEVHQF-VESNGVELDVKLGTALIDMYAKCGDIENSVRVF 261
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG-AS 246
M K+V+TW++MI G + + LF +M G++ NE+T + VL +C +LG S
Sbjct: 262 HSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVS 321
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGG 305
+ K+ + + + + D+ + G+IEEA ++ + + E + W +++G
Sbjct: 322 DGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGA 381
Query: 306 LAIH 309
I+
Sbjct: 382 CRIY 385
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI+ I + VF+ + ++++I G A G GH + L+++M+ GL P+
Sbjct: 244 LIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPN 303
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKDF---NSVIHSLTRLITFYCNFGDV------- 180
T+ +L +C L LV K + SV+H +T + Y D+
Sbjct: 304 EVTFIGVLISCTHL-------GLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHI 356
Query: 181 -KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
++ QL+ D E + V W A++ KN + K+R
Sbjct: 357 EEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLR 399
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/458 (36%), Positives = 273/458 (59%), Gaps = 14/458 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K+VH I ++ + + L+ V + + A +F+++ + ++ T+I Y
Sbjct: 75 KRVHEHIFCKGYEPKMFV---VNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAY 131
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHS 166
+ L + ++ M G+ P+ FTY +L+AC L ++ +H ++K+ S +
Sbjct: 132 SNK-LNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKT-GLESDVFV 189
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
+ LI Y + D+ +A +FD+M +++V W ++I G + + E ++LF++M+ +G
Sbjct: 190 RSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGF 249
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNK--NCIILNDKLGAALTDMYAKCGYIEEA 284
++ TL SVL AC L ELG+ VH V K +ILN+ AL DMY KCG +E+A
Sbjct: 250 LADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNN----ALIDMYCKCGSLEDA 305
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
F ++EK+V +W++++ GLA +G +A+++F M+ SG +P+ +T++ VL ACSHA
Sbjct: 306 NSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHA 365
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
GL+EKG F +M++ + V+P +HYGCL+DLL RA LDEA ++I M EP++V W +
Sbjct: 366 GLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRT 425
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL AC NV+LA A +++I+LEP + G Y+L+SNIYA +W+D ++R+ M
Sbjct: 426 LLGACRVH---RNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTN 482
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
R I K PGCS IE++ +H F++GD HP EEI L
Sbjct: 483 RGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRL 520
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 157/301 (52%), Gaps = 12/301 (3%)
Query: 113 HRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTR 169
HR ++ M +G+ D+ TY L+K C G +++ K VH + K + + +
Sbjct: 37 HRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIF-CKGYEPKMFVVNT 95
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
L+ Y F ++ A+ LFD+M E+NVV+WT MI+ + + N + L R+ GV N
Sbjct: 96 LLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFRE-GVRPN 154
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
T SVL AC L + +H + K + + + +AL D+Y+K ++ AL VF
Sbjct: 155 MFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFD 211
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ +++ WNSIIGG A + G EA+ +F +M+ +G D TL +VL AC+ L+E
Sbjct: 212 EMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLEL 271
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
G+++ ++ K + ++ L+D+ C+ L++A M +E + + W +++
Sbjct: 272 GRQVHVHV---LKFDQDLILNNALIDMYCKCGSLEDANSAFSRM-VEKDVISWSTMVAGL 327
Query: 410 A 410
A
Sbjct: 328 A 328
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 138/282 (48%), Gaps = 17/282 (6%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
+L+ C L +Q+H IIK ++ + LI+ S + A VF+++
Sbjct: 161 VLRACDGLPNLRQLHCGIIKTGLESDVFVRSA---LIDVYSKWSDLDNALGVFDEMPTRD 217
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHS 152
+N++I G+A+ G+ + L+ +M G D T +L+AC L + + VH
Sbjct: 218 LVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHV 277
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
V+K F+ + LI YC G ++ A F +M EK+V++W+ M+ G + R
Sbjct: 278 HVLK---FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSR 334
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG---- 268
+ ++LF M++SG N +T++ VL AC++ G E G + + K + G
Sbjct: 335 QALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKK---LFGVDPGREHY 391
Query: 269 AALTDMYAKCGYIEEALR-VFKIVLEKNVCTWNSIIGGLAIH 309
L D+ + G ++EA++ + ++ E + TW +++G +H
Sbjct: 392 GCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVH 433
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 266/473 (56%), Gaps = 11/473 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+ VH+ +KA F D L++ + A VF ++ + S ++ ++I GY
Sbjct: 316 RAVHSIGVKACFSRE---DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGY 372
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR---QVKGVHSLVVKSKDFNSV 163
A GL ++L+ +M G+ PD +T +L C R + K VH + K D
Sbjct: 373 AREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI-KENDLGFD 431
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-R 222
I L+ Y G ++ A+L+F +M K++++W +I G+ K E + LF +
Sbjct: 432 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ +E T+ VL ACA+L A + G+ +H ++ +N + + +L DMYAKCG +
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 551
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A +F + K++ +W +I G +HG G+EA+ +F QM+ +GI+ D+++ +++L ACS
Sbjct: 552 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 611
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
H+GL+++G F MR + K+EP V+HY C+VD+L R L +AY I NMP+ P+A +W
Sbjct: 612 HSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIW 671
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL C D V+LAE E++ +LEP N G YVLM+NIYA +W+ ++R+ +
Sbjct: 672 GALLCGCRIHHD---VKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRI 728
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
+R + KNPGCS IEI V+ F+ GD +P +E I + L V + EE Y+
Sbjct: 729 GQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYS 781
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 195/353 (55%), Gaps = 11/353 (3%)
Query: 60 NRTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQL 118
N + D+ L +KL N + A VF+++ +N ++ A++G I L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 119 YTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHSLVVKSK--DFNSVIHSLTRLITF 173
+ +M+ +G++ DS+T+ + K+ LR V G +H ++KS + NSV +SL + F
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL---VAF 239
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y V SA+ +FD+MTE++V++W ++ING+V +G+ +F +M SG+E++ T+
Sbjct: 240 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATI 299
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
VSV + CA+ LG+ VH K C D+ L DMY+KCG ++ A VF+ + +
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
++V ++ S+I G A G EAVK+F +M+ GI PD T+ AVL C+ L+++GK +
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 419
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+ ++ + ++ L+D+ + + EA V M ++ + + W +++
Sbjct: 420 -HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTII 470
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 92/186 (49%), Gaps = 4/186 (2%)
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
+++ TL SVL CA+ + + GK V F+ N +++ LG+ L+ MY CG ++EA R
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF V + WN ++ LA G ++ +F +M SG++ D T V + S
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 347 IEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
+ G+++ + ++ + +V + LV + + +D A +V M E + + W S+
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGN--SLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSI 267
Query: 406 LTACAS 411
+ S
Sbjct: 268 INGYVS 273
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 264/487 (54%), Gaps = 10/487 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP + + L Q K++H I++ + + LI+ + A +F Q N
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGI---ALDVFLKSALIDIYFKCRDVGMACKIFKQSTN 237
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGV 150
+I GY GL + ++++ ++ + P++ T +L AC L + K +
Sbjct: 238 VDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKEL 297
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H+ ++K + H + ++ Y G + A +F +M EK+ V W A+I +
Sbjct: 298 HANILK-HGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGK 356
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
+E IDLFR+M G+ + +++ + LSACANL A GK +H F+ K +A
Sbjct: 357 PQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESA 416
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMY KCG + A VF ++ EKN +WNSII HG E ++ +F +M GI+PD
Sbjct: 417 LIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPD 476
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
VT + +L+AC HAG ++KG + F M +Y + ++HY C+VDL RA L+EA+E I
Sbjct: 477 HVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETI 536
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+NMP P+ +WG+LL AC NVELAE+A L+ L+P N G YVL+SN++A
Sbjct: 537 KNMPFSPDDGVWGTLLGACRVH---GNVELAEVASRCLLDLDPENSGCYVLLSNVHADAG 593
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
QW K+R LMK+R + K PG S IE+N H F+ DG HP S +IYS+L + + LR
Sbjct: 594 QWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELR 653
Query: 511 EECYAAR 517
+E Y +
Sbjct: 654 KEGYCPK 660
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 176/347 (50%), Gaps = 10/347 (2%)
Query: 69 AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD 128
+ LI+ + I A +F+++ N +N ++ G+ + G + ++++ M
Sbjct: 11 SSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTK 70
Query: 129 PDSFTYPILLKACGD--LRQVKG-VHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQ 184
P+S T+ +L C L + +H LV+ F+ ++ + L+ Y FG + A
Sbjct: 71 PNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVAN--ALVAMYSKFGQLSDAL 128
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
LF+ M + NVVTW MI G V+ E LF +M +GV + +T S L +
Sbjct: 129 KLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESA 188
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
+ + GK +H ++ ++ I L+ L +AL D+Y KC + A ++FK ++ +II
Sbjct: 189 SLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIIS 248
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVE 364
G ++G +A+++F + + P+ VTL +VL AC+ + GKE+ N+ + E
Sbjct: 249 GYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDE 308
Query: 365 PNVKHYG-CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+H G ++D+ + LD AY++ R MP E +AV W +++T C+
Sbjct: 309 R--RHVGSAIMDMYAKCGRLDLAYQIFRRMP-EKDAVCWNAIITNCS 352
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
+++ +G++L +YA+ G IE+A R+F + K+ WN ++ G G AVK+F M
Sbjct: 5 VDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDM 64
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRAR 381
+ KP+ +T +VL+ C+ L E G ++ + + +P V + LV + +
Sbjct: 65 RNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVAN--ALVAMYSKFG 122
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTA 408
L +A ++ MP + N V W ++
Sbjct: 123 QLSDALKLFNTMP-DTNVVTWNGMIAG 148
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/483 (35%), Positives = 272/483 (56%), Gaps = 12/483 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQII 92
LP L Q K++H I++ N D L + L++ + A V++
Sbjct: 355 LPALTDLNGFNQGKELHGYIVR----NCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSK 410
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---G 149
+T+I GY G+ ++++ ++ G+ P++ +L AC + +K
Sbjct: 411 AIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQE 470
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+HS +K+ + + + L+ Y G + + +F +++ K+ VTW +MI+ +
Sbjct: 471 LHSYALKNA-YEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNG 529
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E ++LFR+M GV+ + +T+ SVLSACA+L A GK +H V K I + +
Sbjct: 530 EPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAES 589
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMY KCG +E A RVF+ + EKN +WNSII +G +E+V + MQ G K
Sbjct: 590 ALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKA 649
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D VT +A+++AC+HAG +++G +F M +Y++ P ++H+ C+VDL RA LD+A E+
Sbjct: 650 DHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMEL 709
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I +MP +P+A +WG+LL AC NVELAEIA + L KL+P N G YVLMSNI A
Sbjct: 710 IVDMPFKPDAGIWGALLHACRVHR---NVELAEIASQELFKLDPHNSGYYVLMSNINAVA 766
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+WD K+RRLMK+ + K PG S +++N+ H F+ D HP SE+IY L+ + + L
Sbjct: 767 GRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLEL 826
Query: 510 REE 512
REE
Sbjct: 827 REE 829
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 194/424 (45%), Gaps = 51/424 (12%)
Query: 34 LPLLQKC---THLVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFN 89
L +L+ C +HL QVH + + A +DT L +L+ V + + A VF+
Sbjct: 43 LAVLRGCVSPSHLSLGLQVHGRAVTAGLHA---TDTALQTRLVGMYVLARRFRDAVAVFS 99
Query: 90 QIINPST---FAFNTVIRGYAEAGLGHRGIQLYTQMIG--NGLDPDSFTYPILLKACGDL 144
+ + +N +IRG AG + Y +M + PDS T+P ++K+C L
Sbjct: 100 SLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAAL 159
Query: 145 RQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
+ + VH ++ + + + LI Y N G + A+ +FD M E++ V W M
Sbjct: 160 GAIALGRLVHR-TARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVM 218
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
++G+VK + ++LF MR SG E N TL LS A G +H K +
Sbjct: 219 MDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGL 278
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
+ L MYAKC +++ ++F ++ ++ TWN +I G +G ++A+ +F
Sbjct: 279 ESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCD 338
Query: 322 MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL--CR 379
MQ SGI+PD VTL+++L A + +GKE+ + R+ V +V LVD+ CR
Sbjct: 339 MQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNC-VHMDVFLVSALVDIYFKCR 397
Query: 380 A-RLLDEAYE-----------------VIRNMPME--------------PNAVLWGSLLT 407
A R+ Y+ V+ M E PNAV S+L
Sbjct: 398 AVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLP 457
Query: 408 ACAS 411
ACAS
Sbjct: 458 ACAS 461
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 171/346 (49%), Gaps = 8/346 (2%)
Query: 69 AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD 128
+ LI+ N + A VF+ + +N ++ GY +AG ++L+ M +G +
Sbjct: 185 SALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCE 244
Query: 129 PDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL 185
P+ T L DL +H+L VK S + L++ Y +
Sbjct: 245 PNFATLACFLSVSATESDLFFGVQLHTLAVK-YGLESEVAVANTLVSMYAKCKCLDDGWK 303
Query: 186 LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA 245
LF M ++VTW MI+G V+ + + LF M+ SG+ + +TLVS+L A +L
Sbjct: 304 LFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNG 363
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
GK +H ++ +NC+ ++ L +AL D+Y KC + A V+ +V +++I G
Sbjct: 364 FNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISG 423
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVE 364
++G +EAVKMF + GI+P+ V + +VL AC+ ++ G+E+ Y ++ Y+
Sbjct: 424 YVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGR 483
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
V+ L+D+ + LD ++ + + + + V W S++++ A
Sbjct: 484 CYVE--SALMDMYAKCGRLDLSHYIFSKISAK-DEVTWNSMISSFA 526
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/488 (36%), Positives = 282/488 (57%), Gaps = 21/488 (4%)
Query: 36 LLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLA-KLIESL--VNSSQIAYAHLVFN 89
LL+ CT L + VHAQI K F +SD + LI+S S I+ A +F
Sbjct: 124 LLKVCTGNVWLPVIESVHAQIEKFGF----MSDVFVPNSLIDSYSKCGSCGISAAKKLFV 179
Query: 90 QI-INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK 148
+ ++N++I G A+ GL +++ +M + D ++ +L + ++
Sbjct: 180 SMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMP----EKDGISWNTMLDGYVKVGKMD 235
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
L + + N V S + ++ YC GD++ A++LFD+M KN+V+WT +++G ++
Sbjct: 236 DAFKLFDEMPERNVV--SWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEK 293
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
RE I LF +M + ++++ T++S+L+ACA G LG+ +H + N ++
Sbjct: 294 GLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEIS 353
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
AL DMYAKCG + A VF + K+V +WN+++ GLA+HG G +A+++F +M+ G
Sbjct: 354 NALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFS 413
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
P+ VT+I VL AC+HAGLI+ G F M RDY + P V+HYGC+VDLL R L+EA
Sbjct: 414 PNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIR 473
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
+IRNMPM PNA++WG+LL AC + VELA ++ L++LEP + GN+ ++SNIYAA
Sbjct: 474 LIRNMPMAPNAIIWGTLLGACRMHN---AVELAREVLDHLVELEPTDSGNFSMLSNIYAA 530
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
W+ R M+ K G S IE+N+ VHEF V D HP S+ IY ++ +
Sbjct: 531 AGDWNCVANTRLRMRSIGTKKPSGASSIEVNNEVHEFTVFDRSHPKSDNIYQVINGLRHE 590
Query: 509 LRE-ECYA 515
L++ EC++
Sbjct: 591 LKQVECFS 598
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 190/382 (49%), Gaps = 24/382 (6%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
L KCT+L Q KQ+HAQI+K+ N + + KLI + Q+ A FNQ+ P+
Sbjct: 27 LHKCTNLNQVKQLHAQILKS---NLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNV 83
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSL 153
+NT+IR ++ + + M +G D+FT+P LLK C L ++ VH+
Sbjct: 84 HLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQ 143
Query: 154 VVKSKDFNSVIHSLTRLITFY--CNFGDVKSAQLLFDQM-TEKNVVTWTAMINGHVKQKN 210
+ K F S + LI Y C + +A+ LF M ++VV+W +MI+G K
Sbjct: 144 IEKF-GFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGL 202
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA-SELGKWVHEFVNKNCIILNDKLGA 269
Y E RK+ D E + ++ ++L +G + K E +N + +
Sbjct: 203 YEEA----RKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSW-----S 253
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
+ Y K G +E A +F + KN+ +W I+ G A G EA+ +F QM+ + +K
Sbjct: 254 TMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKL 313
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMR-RDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
D+ T++++L AC+ +GL+ G++I +++ ++K + + LVD+ + L+ AY+
Sbjct: 314 DNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISN--ALVDMYAKCGRLNIAYD 371
Query: 389 VIRNMPMEPNAVLWGSLLTACA 410
V ++ + V W ++L A
Sbjct: 372 VFNDIK-NKDVVSWNAMLQGLA 392
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 257/425 (60%), Gaps = 10/425 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI V + + AH +F+Q+ + ++ T+I Y++ + + ++L M+ + + P+
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
+TY +L++C + V+ +H ++K + S + + LI + G+ + A +FD+M
Sbjct: 162 VYTYSSVLRSCNGMSDVRMLHCGIIK-EGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
+ + W ++I G + ++LF++M+ +G + TL SVL AC L ELG
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 251 WVHEFVNK--NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
H + K +ILN+ AL DMY KCG +E+ALRVF + E++V TW+++I GLA
Sbjct: 281 QAHVHIVKYDQDLILNN----ALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ 336
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
+G +EA+K+F +M+ SG KP+ +T++ VL ACSHAGL+E G F +M++ Y ++P +
Sbjct: 337 NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE 396
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HYGC++DLL +A LD+A +++ M EP+AV W +LL AC N+ LAE A +++
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQ---RNMVLAEYAAKKV 453
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
I L+P + G Y L+SNIYA +WD ++R M++R I K PGCS IE+N +H F++G
Sbjct: 454 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 513
Query: 489 DGRHP 493
D HP
Sbjct: 514 DNSHP 518
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 157/300 (52%), Gaps = 11/300 (3%)
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNS---VIHSLTRL 170
R ++ + +GL DS TY L+K C R V +L+ + FN ++ + L
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHE-GNLICRHLYFNGHRPMMFLVNVL 102
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNE 230
I Y F + A LFDQM ++NV++WT MI+ + K K +++ ++L M V N
Sbjct: 103 INMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNV 162
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI 290
T SVL +C G S++ + +H + K + + + +AL D++AK G E+AL VF
Sbjct: 163 YTYSSVLRSCN--GMSDV-RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
++ + WNSIIGG A + + A+++F +M+ +G + TL +VL AC+ L+E G
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ ++ K + ++ LVD+ C+ L++A V M E + + W ++++ A
Sbjct: 280 MQAHVHI---VKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLA 335
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 281/492 (57%), Gaps = 13/492 (2%)
Query: 29 KSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF 88
KS + ++ HL + +Q HA ++ S L KL+ + IAY +F
Sbjct: 9 KSAEYEAVVSAGPHLRRLQQAHAHLVVTGCHR---SRALLTKLLTLSCAAGSIAYTRRLF 65
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK 148
+ +P +F FN++I+ + G + Y +M+ + + P ++T+ ++KAC DL ++
Sbjct: 66 RSVSDPDSFLFNSLIKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLR 125
Query: 149 G---VHSLV-VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMING 204
VHS V V NS + + L+TFY + A+ +FD+M +++++ W +MI+G
Sbjct: 126 LGTIVHSHVFVSGYASNSFVQAA--LVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISG 183
Query: 205 HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
+ + E +++F KMR+SG E + T VSVLSAC+ LG+ +LG W+HE + I +N
Sbjct: 184 YEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMN 243
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
L +L +M+++CG + A VF + E NV +W ++I G +HG G EA+++F +M+
Sbjct: 244 VVLATSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKA 303
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
G+ P+ VT +AVL+AC+HAGLI +G+ +F +M+++Y V P V+H+ C+VD+ R LL+
Sbjct: 304 CGVVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLN 363
Query: 385 EAYEVIRNMPMEP-NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
EAY+ +R + E +W ++L AC N +L E LI EP N G+YVL+S
Sbjct: 364 EAYQFVRGLSSEELVPAVWTAMLGACKMHK---NFDLGVEVAENLISAEPENPGHYVLLS 420
Query: 444 NIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
N+YA + D +R +M +R + K G S I++ + + F +GD HP + EIY L+
Sbjct: 421 NMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVENRSYLFSMGDKSHPETNEIYCYLD 480
Query: 504 YVAISLREECYA 515
+ ++ YA
Sbjct: 481 ELMWRCKDAGYA 492
>gi|413924390|gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 217/343 (63%), Gaps = 10/343 (2%)
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
+N++I L R G V +A +FD M + V+WTA+I+G VK + E ID FR
Sbjct: 141 YNTMISGLMR-------NGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFR 193
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
M GVE + +TLV+V+SACA +GA LG WVH V + + N ++ +L DMYA+CG
Sbjct: 194 AMLLDGVETDYITLVAVVSACAEVGALGLGMWVHRLVLRQRLERNVRVANSLIDMYARCG 253
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
+ A +VF+ + ++ V +WNS+I G A +G +A+++F +M+ G KPD VTL VLT
Sbjct: 254 QVNLAAQVFRSIRKRTVVSWNSMIVGFAANGRCTDAIELFEEMRRQGFKPDAVTLTGVLT 313
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSHAGL E G + M +Y V ++HYGC+VDLL RA LDEA V+ MPM PN
Sbjct: 314 ACSHAGLTEHGLRYYDLMTTEYGVAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNE 373
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
V+ G+LL C + N+++AE M+ L +L+P D NYVL+SNIYAA +WD AGK+R
Sbjct: 374 VVLGALLAGCRTH---GNLDMAEQMMQHLFELDPQGDANYVLLSNIYAAVGKWDGAGKVR 430
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
LMK R + K PG S +EI+ VHEF+ GD HP + EI ML
Sbjct: 431 SLMKARGVKKRPGHSTVEIDGDVHEFVSGDQSHPLAGEIGQML 473
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 112/255 (43%), Gaps = 38/255 (14%)
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDS--GVEVNELTLVSVLSACANLGASELGK 250
++VV+WT+ I+ +Q + M S N++TL++VLSACA+ +S L
Sbjct: 30 RDVVSWTSTISRAARQGDLHAAAASLCAMVSSPAAPAPNDVTLLTVLSACADSPSSPLAS 89
Query: 251 WVHEFVNKNCIILNDK---LGAALTDMY-------------------------------A 276
+ ++ + L L L Y
Sbjct: 90 PLALTLHARALKLFPSHLLLSTCLARFYLASRLPHLALQLFDSMPVRSVVTYNTMISGLM 149
Query: 277 KCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIA 336
+ G ++ A VF + + +W ++I G +G +EA+ F M + G++ D +TL+A
Sbjct: 150 RNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDGVETDYITLVA 209
Query: 337 VLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPME 396
V++AC+ G + G + + R ++E NV+ L+D+ R ++ A +V R++ +
Sbjct: 210 VVSACAEVGALGLGMWVHRLVLRQ-RLERNVRVANSLIDMYARCGQVNLAAQVFRSI-RK 267
Query: 397 PNAVLWGSLLTACAS 411
V W S++ A+
Sbjct: 268 RTVVSWNSMIVGFAA 282
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/435 (37%), Positives = 253/435 (58%), Gaps = 42/435 (9%)
Query: 70 KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLG--HRGIQLYTQMIGNGL 127
++ V ++ A +F+++ F++ +I GY + G R +L+ QM L
Sbjct: 186 SMVAGYVGCGEMGLAQELFDEMPQRDAFSWGALIDGYGKQGGAGVDRARELFDQMTERDL 245
Query: 128 DPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
C +NS+I Y G + A+ LF
Sbjct: 246 ------------VC------------------WNSMIDG-------YARHGRMDEARSLF 268
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
++M E+NV++W+ +I+GHV+ +E ++ F+ M G+ + + V +SACA LGA E
Sbjct: 269 EEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLRCGIRPDRVAAVGAVSACAQLGALE 328
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
G+W+H ++ K ++ + + AL DMY KCG ++ A+ +F+ + E++V TWN +I GL
Sbjct: 329 QGRWLHSYLEKKKVLSDVVVQTALIDMYMKCGRMDLAMLIFESMPERSVVTWNVMIVGLG 388
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
HG G +AV +F +M+ + DD++L+A+LTAC+HAGL+ +G EIF+ M++D+ ++P V
Sbjct: 389 THGYGLDAVMLFHRMEAERVAVDDLSLLAMLTACTHAGLVSEGLEIFHRMKKDFGIDPKV 448
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+HYG LVDLL RA LD+A I MPMEP LWGSLL AC S + VELAE+++ER
Sbjct: 449 EHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLLAACRSH---SCVELAELSVER 505
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L L + G YVL+SNIYA + W D ++R+LM + + K+ G SVIE++ +HEF+
Sbjct: 506 LANLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRKDIGRSVIEVDGEIHEFVN 565
Query: 488 GDGRHPCSEEIYSML 502
G G H C++EIY ML
Sbjct: 566 GGGSHLCTDEIYLML 580
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 172/347 (49%), Gaps = 24/347 (6%)
Query: 72 IESLVNSSQIAYAHLVFNQIINPST---FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD 128
I S+ ++ +A A VF ++ P+ F +NT IR +A G + + +M G+
Sbjct: 54 IASVPGAAPLADA--VFARLPEPAARDPFPWNTAIRLHAP-GRPRAALLYFARMRSCGVR 110
Query: 129 PDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL 185
PD++T+P +LKACG + VH+ V+ + + + ++ LI+FYC D S +
Sbjct: 111 PDAYTFPAVLKACGCAPGCRAGLLVHAEAVR-RGLGADLFTVNALISFYCRILDCISGRK 169
Query: 186 LFDQM--TEKNVVTWTAMINGHVKQKNYREGIDLFRKM--RDSGVEVNELTLVSVLSACA 241
+FD+ +++V+W +M+ G+V +LF +M RD+ + L+
Sbjct: 170 VFDEAGGVSRDLVSWNSMVAGYVGCGEMGLAQELFDEMPQRDA---FSWGALIDGYGKQG 226
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
G + + ++ + N ++ D YA+ G ++EA +F+ + E+NV +W+
Sbjct: 227 GAGVDRARELFDQMTERDLVCWN-----SMIDGYARHGRMDEARSLFEEMPERNVISWSI 281
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+I G G +EA++ F M GI+PD V + ++AC+ G +E+G+ + + +
Sbjct: 282 VIDGHVRCGEAKEALEHFQSMLRCGIRPDRVAAVGAVSACAQLGALEQGRWLHSYLEKK- 340
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
KV +V L+D+ + +D A + +MP E + V W ++
Sbjct: 341 KVLSDVVVQTALIDMYMKCGRMDLAMLIFESMP-ERSVVTWNVMIVG 386
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/432 (37%), Positives = 264/432 (61%), Gaps = 16/432 (3%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI + +A VF+ ++N+++ GY G ++ +M + D
Sbjct: 151 LISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMP----ERD 206
Query: 131 SFTYPILL----KACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
++ I++ K G++ + + V + ++D + S +I Y G+++ A+ +
Sbjct: 207 VVSWSIMIDGYGKKMGEVNRAR-VFFDSMPTRD----LVSWNSMIDGYAKVGEMEVAREI 261
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FB+M +KNV++W+ MI+G+ ++ +E ++LFR+M G++ + +++V +SAC+ LGA
Sbjct: 262 FBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGAL 321
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
+ G+W+H ++ +N ++L+ + AL DMY KCG +EA +F + E+NV +WN +I GL
Sbjct: 322 DQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGL 381
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
++G G+EA++ F QM+M I DD+ + VL ACSHA L+ +G IF M+ Y++EP
Sbjct: 382 GMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPK 441
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
++HYGCLVDLL RA LD+ +I++MPM+PNA LWGSLL AC NV LAEI +E
Sbjct: 442 LEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQ---NVTLAEIVVE 498
Query: 427 RLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFM 486
RL +L+ + G YVLMSNIYA W+ ++R+LMKER + K+ G SVIE++ V EF+
Sbjct: 499 RLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFV 558
Query: 487 VGDGRHPCSEEI 498
G+ H EEI
Sbjct: 559 SGEKSHILREEI 570
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 210/410 (51%), Gaps = 25/410 (6%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSS-QIAYAHLVFNQI 91
L LLQ Q Q+HAQ+I + ISDT A +L++S+V+ + + YA LVF QI
Sbjct: 15 LSLLQXSKTSSQILQIHAQLITTNL----ISDTFAASRLLDSVVSKTLNVNYAELVFAQI 70
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVK 148
P++F NT+++ Y E+ R ++ Y +M GL D++TYP +LKACG L +
Sbjct: 71 HQPNSFICNTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGG 130
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
V VK + F + + LI+ YC G+ A+ +FD +EK++V+W +M+ G+V
Sbjct: 131 LVQGEAVK-RGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWC 189
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
++F +M + V + + + + + + ++ + N
Sbjct: 190 GEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARV--FFDSMPTRDLVSWN---- 243
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
++ D YAK G +E A +F +L+KNV +W+ +I G A H +EA+ +F QM GIK
Sbjct: 244 -SMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIK 302
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD V+++ ++ACS G +++G+ I M+R+ ++ ++ LVD+ + DEA
Sbjct: 303 PDRVSVVGAVSACSQLGALDQGRWIHLYMKRN-RMLLDIVVQTALVDMYLKCGSXDEARX 361
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVE--LAEIAMERLIKLEPFND 436
+ +MP E N V W ++ G ++ MER+ P +D
Sbjct: 362 IFNSMP-ERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERI----PMDD 406
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/507 (35%), Positives = 278/507 (54%), Gaps = 75/507 (14%)
Query: 41 THLVQFKQVHAQIIKASFDN-----RTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
T+L +Q+HA +I F + R + T ++ ++ YA +F QI P
Sbjct: 12 TNLGTLRQIHALMIVNGFTSNVGFLRKLVLTTAMSMVGPAATTAVTQYAVQMFAQIPQPD 71
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA--------------- 140
TF +NT IRG +++ + LY QM + PD+FT+P++LKA
Sbjct: 72 TFMWNTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKLFWVNTGSVVHG 131
Query: 141 -----------------------CGDLRQVKGVHS----------------------LVV 155
CGDL+ + L V
Sbjct: 132 RVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAGYAQRGDLSV 191
Query: 156 KSKDFNSV----IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
K F+ + + S +IT Y G+++ A+ LFD+ K+VV+W AM+ G+V
Sbjct: 192 ARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNAMVGGYVLHNLN 251
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH-EFVNKNCIILNDKLGAA 270
+E ++LF +M + G +E+T++S+LSACA+LG + G+ VH + + N L+ LG A
Sbjct: 252 QEALELFDEMCEVGECPDEVTMLSLLSACADLG--DXGEKVHAKIMELNKGKLSTLLGNA 309
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMYAKCG I + + VF ++ +K++ +WNS+IGGLA HG EE++ +F +MQ + + PD
Sbjct: 310 LVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVCPD 369
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
++T + VL ACSH G +++G FY M+ YK+EPN++H GC+VD+L RA LL EA++ I
Sbjct: 370 EITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARAGLLKEAFDFI 429
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+M +EPNA++W SLL AC D VELA+ A E+L+++ G+YVL+SN+YA+
Sbjct: 430 ASMKIEPNAIVWRSLLGACKVHGD---VELAKRATEQLLRMRVDQSGDYVLLSNVYASHG 486
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIE 477
+WD A +R+LM + + K G S +E
Sbjct: 487 EWDGAENVRKLMDDNGVTKTRGSSFVE 513
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/484 (36%), Positives = 278/484 (57%), Gaps = 14/484 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFN--QII 92
LQ C + + I + FD D+ +I+ V + A +F+ +
Sbjct: 158 FLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPME 217
Query: 93 NPSTFAFNTVIRGYAEAGLGHR-GIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVH 151
+ ++N++I GYA + G R +L+ +M D ++ ++ C +++ H
Sbjct: 218 QKNLISWNSMISGYARSEEGLRVAWELFEEMPKR----DLISWNSMIDGCVKCGKMENAH 273
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
L + + V S ++ Y G++ A+ LFD+M E++V++ AM+ G+V+ +
Sbjct: 274 HLFNQMPKRDVV--SWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHL 331
Query: 212 REGIDLFRKMRDSG-VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E ++ F M + + TL+ LSA A LG + G +H ++ N L++KLG A
Sbjct: 332 MEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVA 391
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMYAKCG I+ AL VF+ + +K++ WN+IIGGLAIHG GE A ++F +M+ +KPD
Sbjct: 392 LIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPD 451
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
D+T I VL AC+HAGL+++G F MRR +KVEP ++HYGC+VD+L RA ++EA + +
Sbjct: 452 DITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFV 511
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
MP+EPN V+W +LL+AC + + N + E + LI ++ +N +YVL+SNIYA
Sbjct: 512 EKMPIEPNDVVWRTLLSACRNHE---NFTIGEPVAKHLISVDSYNPSSYVLLSNIYAGFG 568
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
W+D ++R +MK+R++ K PGCS IE+ VHEF V D HP EIYSML+ ++
Sbjct: 569 MWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQVREIYSMLDSLSALNS 628
Query: 511 EECY 514
E Y
Sbjct: 629 EVAY 632
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 131/584 (22%), Positives = 242/584 (41%), Gaps = 118/584 (20%)
Query: 17 SANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLV 76
SA S++ N+ +H L LL K L Q+H+++I F N T++ S
Sbjct: 4 SATSNQPWNS---THPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSS 60
Query: 77 NSSQIAYAHLVF---------NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL 127
+ + +A +F + NP F +N +I+ ++ ++ M+ NG+
Sbjct: 61 HKPLVEFARYLFMSRHFGRKHRKQDNP--FLWNAIIKSFSHGEDPREAFVIFNLMLENGV 118
Query: 128 DPDSFTYPILLKACGDLRQVK---GVHSLV--------------------------VKSK 158
D F++ ++LKAC L +K +H L+ + +
Sbjct: 119 CVDKFSFSLVLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQ 178
Query: 159 DFNSVIH----SLTRLITFYCNFGDVKSAQLLFD--QMTEKNVVTWTAMINGHVK-QKNY 211
F+ ++ S +I Y G VKSA+ LFD M +KN+++W +MI+G+ + ++
Sbjct: 179 LFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGL 238
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
R +LF +M + ++ S++ C G E + + K ++ A +
Sbjct: 239 RVAWELFEEMPKRDL----ISWNSMIDGCVKCGKMENAHHLFNQMPKRDVV----SWANM 290
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIKPD 330
D YAK G I+ A +F + E++V + N+++ G +G EA+ F M + PD
Sbjct: 291 VDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPD 350
Query: 331 DVTLIAVLTACSHAGLIEKGKEIF-------YNMRRDYKV-------------------- 363
+ TL+ L+A + G ++G + +++ V
Sbjct: 351 NATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFE 410
Query: 364 ---EPNVKHYGCLVDLLCRARLLDEAYEVIRNMP---MEPNAVLWGSLLTACASADDGAN 417
+ ++ H+ ++ L L + A+E+ M ++P+ + + +L AC A
Sbjct: 411 DIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKE 470
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
+ M R+ K+EP +Y M +I ++A K + K P IE
Sbjct: 471 GLMCFELMRRVHKVEP-KLQHYGCMVDILGRAGHVEEAKKF--------VEKMP----IE 517
Query: 478 INDVV----------HE-FMVGD--GRHPCSEEIYSMLEYVAIS 508
NDVV HE F +G+ +H S + Y+ YV +S
Sbjct: 518 PNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLS 561
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 257/425 (60%), Gaps = 10/425 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI V + + AH +F+Q+ + ++ T+I Y++ + + ++L M+ + + P+
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
+TY +L++C + V+ +H ++K + S + + LI + G+ + A +FD+M
Sbjct: 162 VYTYSSVLRSCNGMSDVRMLHCGIIK-EGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
+ + W ++I G + ++LF++M+ +G + TL SVL AC L ELG
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 251 WVHEFVNK--NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
H + K +ILN+ AL DMY KCG +E+ALRVF + E++V TW+++I GLA
Sbjct: 281 QAHVHIVKYDQDLILNN----ALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ 336
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
+G +EA+K+F +M+ SG KP+ +T++ VL ACSHAGL+E G F +M++ Y ++P +
Sbjct: 337 NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE 396
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HYGC++DLL +A LD+A +++ M EP+AV W +LL AC N+ LAE A +++
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQ---RNMVLAEYAAKKV 453
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
I L+P + G Y L+SNIYA +WD ++R M++R I K PGCS IE+N +H F++G
Sbjct: 454 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 513
Query: 489 DGRHP 493
D HP
Sbjct: 514 DNSHP 518
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 157/300 (52%), Gaps = 11/300 (3%)
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNS---VIHSLTRL 170
R ++ + +GL DS TY L+K C R V +L+ + FN ++ + L
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHE-GNLICRHLYFNGHRPMMFLVNVL 102
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNE 230
I Y F + A LFDQM ++NV++WT MI+ + K K +++ ++L M V N
Sbjct: 103 INMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNV 162
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI 290
T SVL +C G S++ + +H + K + + + +AL D++AK G E+AL VF
Sbjct: 163 YTYSSVLRSCN--GMSDV-RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
++ + WNSIIGG A + + A+++F +M+ +G + TL +VL AC+ L+E G
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ ++ K + ++ LVD+ C+ L++A V M E + + W ++++ A
Sbjct: 280 MQAHVHI---VKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLA 335
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/451 (35%), Positives = 265/451 (58%), Gaps = 7/451 (1%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI L+ S+I + +F + + ++ +I G+ + GL I L+ +M L+ D
Sbjct: 214 LIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMD 273
Query: 131 SFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
+T+ +L ACG L++ K VH+ ++++ D+ I + L+ YC +KSA+ +F
Sbjct: 274 QYTFGSVLTACGGVMALQEGKQVHAYIIRT-DYQDNIFVGSALVDMYCKCKSIKSAETVF 332
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+M KNVV+WTAM+ G+ + E + +F M+++G+E ++ TL SV+S+CANL + E
Sbjct: 333 RKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLE 392
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
G H + +I + AL +Y KCG IE++ R+F + + +W +++ G A
Sbjct: 393 EGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYA 452
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
G E +++F M G KPD VT I VL+ACS AGL++KG +IF +M +++++ P
Sbjct: 453 QFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIE 512
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
HY C++DL RA L+EA + I MP P+A+ W SLL++C N+E+ + A E
Sbjct: 513 DHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFH---RNMEIGKWAAES 569
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L+KLEP N +Y+L+S+IYAAK +W++ +R+ M+++ + K PGCS I+ + VH F
Sbjct: 570 LLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSA 629
Query: 488 GDGRHPCSEEIYSMLEYVAISLREECYAARM 518
D +P S++IYS LE + + +E Y M
Sbjct: 630 DDQSNPFSDQIYSELEKLNYKMVQEGYVPDM 660
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 189/400 (47%), Gaps = 77/400 (19%)
Query: 22 KNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQI 81
K N+ + S+H+ LL+ C K++H IIKA F N I L L+ + +I
Sbjct: 7 KQFNSMSLSNHYCELLKHCRDT---KKIHCHIIKA-FRNPEI--FLLNNLVSAYAKFDRI 60
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGY-----------------------------AEAGLG 112
YA VF+Q+ + +++NT++ Y A AG G
Sbjct: 61 TYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRG 120
Query: 113 H--RGIQLYTQMIGNGLDPDSF------TYPILLKACGDLRQVKGVHSLVVKSKDFNSVI 164
+ ++ Y M+ NG P + T IL G + VH VVK F S +
Sbjct: 121 FLLQSVKAYNLMLYNG--PFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKF-GFQSYV 177
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVV---------------------------- 196
+ L+ Y G V A+ FD+M EKNVV
Sbjct: 178 FVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEK 237
Query: 197 ---TWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
+WTAMI G + RE IDLFR+MR +E+++ T SVL+AC + A + GK VH
Sbjct: 238 DSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVH 297
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
++ + N +G+AL DMY KC I+ A VF+ + KNV +W +++ G +G E
Sbjct: 298 AYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSE 357
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
EAVK+F MQ +GI+PDD TL +V+++C++ +E+G +
Sbjct: 358 EAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQF 397
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 20/156 (12%)
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
L Y+K + E RVF + +++ +WNS+I A G ++VK + M +G P
Sbjct: 80 TLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNG--P 137
Query: 330 DDVTLIAVLT--------ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
++ IA+ T C H GL G + + + V LVD+ +
Sbjct: 138 FNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSP------LVDMYSKTG 191
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSL---LTACASADD 414
L+ A + MP E N V++ +L L C+ +D
Sbjct: 192 LVFCARQAFDEMP-EKNVVMYNTLIAGLMRCSRIED 226
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 271/475 (57%), Gaps = 12/475 (2%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q K++HA +++ F + ++ L +L+E+LV + YA VF+++ P F +NT+ +
Sbjct: 26 QLKKIHAIVLRTGFSEK---NSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFK 82
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFN 161
GY L + LY +M G+ PD FTYP ++KA GD +H+ VVK F
Sbjct: 83 GYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY-GFG 141
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
+ T L+ Y FG++ SA+ LF+ M K++V W A + V+ N ++ F KM
Sbjct: 142 CLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM 201
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
V+ + T+VS+LSAC LG+ E+G+ +++ K I N + A DM+ KCG
Sbjct: 202 CADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
E A +F+ + ++NV +W+++I G A++G EA+ +F MQ G++P+ VT + VL+AC
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 342 SHAGLIEKGKEIFYNMRR--DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
SHAGL+ +GK F M + D +EP +HY C+VDLL R+ LL+EAYE I+ MP+EP+
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
+WG+LL ACA D + L + + L++ P +VL+SNIYAA +WD K+R
Sbjct: 382 GIWGALLGACAVHRD---MILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVR 438
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
M++ K S +E +H F GD HP S+ IY L+ + +R+ Y
Sbjct: 439 SKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGY 493
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 269/451 (59%), Gaps = 11/451 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQI--INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-L 127
LI + + + A VF+ + + ++N++I GY ++ ++++ +++G+G L
Sbjct: 168 LISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLGDGSL 227
Query: 128 DPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQ 184
PD T L CG L + K +H L S F + + LI Y G ++ A+
Sbjct: 228 SPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGS-GFVLDVFVGSSLIDMYSKCGQIEDAR 286
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
+FD++ +N V WT+MI G+ + ++E I+LFR+M+ G + T+ VLSAC + G
Sbjct: 287 KVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWG 346
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
A G+W+H + +N I ++ AL MY+KCG I++AL +F + + ++ +W+++I
Sbjct: 347 ALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVIS 406
Query: 305 GLAIHGCGEEAVKMFWQMQM-SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
GLA++G ++A+ +F QM+M S I+P+++T + VL AC+H G ++KG F M + Y +
Sbjct: 407 GLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNL 466
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
P ++HYGC+VDLL RA LL EA + IR +P++P+ V+W SLL AC + N+ELAE
Sbjct: 467 TPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFAC---RNHGNIELAEF 523
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVH 483
A +++ +LEP G VL+SN+YA+ ++W D ++R+ M + I K PGCS +EI+ +VH
Sbjct: 524 AAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVH 583
Query: 484 EFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
E V D HP IY + + +L+ + +
Sbjct: 584 ELFVADRSHPEMGAIYETMISINKALQSKGF 614
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 211/396 (53%), Gaps = 25/396 (6%)
Query: 29 KSHHH--LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL 86
+S+H+ L LLQ +H F Q+ + I + + ++L L SL + A++
Sbjct: 25 QSYHNFSLSLLQNLSHPRSFNQILSHAIASGVFRDPVVSSKL--LYYSLSHDHDFAFSRT 82
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
+F QI P+ F++N + R Y+ + I LY M+ NG PD++++P +LKAC L
Sbjct: 83 LFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARL-- 140
Query: 147 VKGVHSLVVKSKDFNSVIHSL---------TRLITFYCNFGDVKSAQLLFDQMTE--KNV 195
SL+ K ++ +S L LI+ + + G V++A+ +FD + ++V
Sbjct: 141 -----SLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDV 195
Query: 196 VTWTAMINGHVKQKNYREGIDLFRK-MRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
V+W +MI+G+++ Y + +F + + D + +E+TLVS LS C LG +LGK +H
Sbjct: 196 VSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHG 255
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+ +L+ +G++L DMY+KCG IE+A +VF + +N W S+I G A +E
Sbjct: 256 LFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKE 315
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+++F +MQ+ G D T+ VL+AC H G + +G+ I R+ +E ++ L+
Sbjct: 316 AIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERN-SIEMDLNARNALI 374
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ + + +A E+ + +P+ W ++++ A
Sbjct: 375 GMYSKCGDIQKALEIFHGL-TQPDIFSWSAVISGLA 409
>gi|357126462|ref|XP_003564906.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 582
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/500 (34%), Positives = 278/500 (55%), Gaps = 22/500 (4%)
Query: 7 PNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDT 66
P + L +F + + ++ +L+ C V VHA+ ++ D +
Sbjct: 93 PRNALAYFA----CMRRAAVEPDAYTFPAVLKACACGVLGLPVHAEAVRTGMDGDLFTRN 148
Query: 67 QLAKLIESL--VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
L + S + + H + + ++N+++ GY G ++L ++
Sbjct: 149 ALVSFYCRIGDCRSGRKVFDHGARDLV------SWNSMVAGYVACG----ELELAQELFD 198
Query: 125 NGLDPDSFTYPILLKACGDLRQVKGV-HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSA 183
D+F++ ++ A G ++ GV + + + N + +I Y G + A
Sbjct: 199 GMPLRDAFSWATMIDAYG--KRSGGVDRARELFDETPNRDLVCWCSMIDGYARQGRMDEA 256
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
+ LF++M E+NV++W+ +++G+V+ E ++LF++M G++ + + V +ACA L
Sbjct: 257 RALFEEMPERNVISWSIVVDGYVRCGEPSEALELFQRMLRCGIKPDRVAAVGAFTACAQL 316
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
GA E G+W+H ++ K ++ + + AL DMY KCG ++ +F+ + +K+V TWN +I
Sbjct: 317 GALEQGRWLHSYLEKKKVLFDVVVQTALIDMYMKCGRLDLGKLIFESMPDKSVVTWNVMI 376
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
GL H CG AVK+F+QM+ G DD++++AVLTAC+HAGLI +G IF+ MR+D+ +
Sbjct: 377 IGLGTHSCGLHAVKLFYQMEAEGAPIDDLSVLAVLTACTHAGLISEGLGIFHRMRKDFGM 436
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEI 423
+P V+HYG LVDLL RA LD A I MPMEP LWGSLL AC S VELAE+
Sbjct: 437 DPKVEHYGALVDLLGRAGHLDHARHAIETMPMEPTPELWGSLLAACRSHR---CVELAEL 493
Query: 424 AMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVH 483
++ERL L + G YVL+SNIYA + WD ++RRLM + K+ G SVIE++ H
Sbjct: 494 SVERLASLGADDFGVYVLLSNIYADEGMWDGVFRIRRLMSAEGMKKDIGRSVIEVDGQTH 553
Query: 484 EFMVGDGRHPCSEEIYSMLE 503
EF+ G H C +E++ ML+
Sbjct: 554 EFVNGGSSHSCKDEVHLMLQ 573
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 162/322 (50%), Gaps = 20/322 (6%)
Query: 87 VFNQII-NPST---FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG 142
VF +++ P++ F +NT+IR +A A + + M ++PD++T+P +LKAC
Sbjct: 65 VFARLLPGPASRDAFPWNTLIRLHAPAS-PRNALAYFACMRRAAVEPDAYTFPAVLKACA 123
Query: 143 DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
VH+ V++ + + + L++FYC GD +S + +FD +++V+W +M+
Sbjct: 124 CGVLGLPVHAEAVRTG-MDGDLFTRNALVSFYCRIGDCRSGRKVFDH-GARDLVSWNSMV 181
Query: 203 NGHVKQKNYREGIDLFRKM--RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
G+V +LF M RD+ + T++ + G + E N++
Sbjct: 182 AGYVACGELELAQELFDGMPLRDA---FSWATMIDAYGKRSG-GVDRARELFDETPNRDL 237
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ ++ D YA+ G ++EA +F+ + E+NV +W+ ++ G G EA+++F
Sbjct: 238 VCW-----CSMIDGYARQGRMDEARALFEEMPERNVISWSIVVDGYVRCGEPSEALELFQ 292
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M GIKPD V + TAC+ G +E+G+ + + + KV +V L+D+ +
Sbjct: 293 RMLRCGIKPDRVAAVGAFTACAQLGALEQGRWLHSYLEKK-KVLFDVVVQTALIDMYMKC 351
Query: 381 RLLDEAYEVIRNMPMEPNAVLW 402
LD + +MP + + V W
Sbjct: 352 GRLDLGKLIFESMP-DKSVVTW 372
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 260/482 (53%), Gaps = 9/482 (1%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
+ C + +++HA++ K+ QL L + A +F+ + +
Sbjct: 49 VNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAED---ALKLFDDMPHKDL 105
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-GDLRQVKGVHSLVV 155
++N++I G++ L YT + P+ T ++ AC G L K +H +
Sbjct: 106 VSWNSLISGFSRC-LHMSLTAFYTMKFEMSVKPNEVTILSMISACNGALDAGKYIHGFGI 164
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
K V LI Y GD+ SA LF+ + + N V+W ++I V REGI
Sbjct: 165 KVGGTLEV-KVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGI 223
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
D F KMR G+E +E T++++L AC +LG +L + +H + + AL D Y
Sbjct: 224 DYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTY 283
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
AK G + + VF V + W +++ G A HG G EA+K+F M G++PD VT
Sbjct: 284 AKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFT 343
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
+L+ACSH+GL+ +GK F M Y +EP V HY C+VDLL R LL++AYEVI+NMPM
Sbjct: 344 HLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPM 403
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
EPNA +WG+LL AC N+EL + E LI +EP + NY+++SN+Y+A W DA
Sbjct: 404 EPNAGVWGALLGACRVH---GNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDA 460
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
K+R L+KER + + PG S IE + H F VGD HP +E+IYS LE + +R+ Y+
Sbjct: 461 AKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYS 520
Query: 516 AR 517
++
Sbjct: 521 SK 522
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/477 (35%), Positives = 272/477 (57%), Gaps = 23/477 (4%)
Query: 54 IKASFDNRTISDTQLAKLIESLVN-------------SSQIAYAHLVFNQIINPSTFAFN 100
+KA R+I ESLVN S++IA LVF + + + ++N
Sbjct: 259 MKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIA--RLVFKGMRSKTVVSWN 316
Query: 101 TVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKS 157
T+I G A+ G + +M+ G P T +L AC GDL + VH L+ K
Sbjct: 317 TMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKL 376
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
K +S + + LI+ Y V A +F+ + EK VTW AMI G+ + +E ++L
Sbjct: 377 K-LDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNL 434
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
F M+ G++++ TLV V++A A+ + KW+H + C+ N + AL DMYAK
Sbjct: 435 FCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAK 494
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG I+ A ++F ++ E++V TWN++I G HG G+E + +F +MQ +KP+D+T ++V
Sbjct: 495 CGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSV 554
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
++ACSH+G +E+G +F +M+ DY +EP + HY +VDLL RA LD+A+ I+ MP++P
Sbjct: 555 ISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKP 614
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
+ G++L AC NVEL E A ++L KL+P G +VL++NIYA+ + WD K
Sbjct: 615 GISVLGAMLGACKIHK---NVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAK 671
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+R M+++ + K PGCS +E+ + +H F G HP S++IY+ LE + ++ Y
Sbjct: 672 VRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGY 728
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 223/481 (46%), Gaps = 52/481 (10%)
Query: 36 LLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LLQ C L + +++H II F++ T + L QI A+ +F ++
Sbjct: 151 LLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSL---YAKCRQIDNAYKMFERMQ 207
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
+ ++ T++ GYA+ G R +QL QM G PDS T +L A D++ + +
Sbjct: 208 HKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRS 267
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H +S F S+++ L+ Y G + A+L+F M K VV+W MI+G +
Sbjct: 268 IHGYAFRS-GFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNG 326
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E F KM D G +T++ VL ACANLG E G +VH+ ++K + N +
Sbjct: 327 ESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMN 386
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
+L MY+KC ++ A +F LEK TWN++I G A +GC +EA+ +F MQ GIK
Sbjct: 387 SLISMYSKCKRVDIAASIFN-NLEKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKL 445
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA-------RL 382
D TL+ V+TA + + + K I + + ++ NV LVD+ + +L
Sbjct: 446 DCFTLVGVITALADFSVNRQAKWI-HGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKL 504
Query: 383 LD------------------------EAYEVIRNM---PMEPNAVLWGSLLTACASADDG 415
D E ++ M ++PN + + S+++AC+ +
Sbjct: 505 FDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFV 564
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
L +M+ LEP D +Y M ++ Q DDA + M + PG SV
Sbjct: 565 EEGLLLFKSMQEDYYLEPTMD-HYSAMVDLLGRAGQLDDAWNFIQEMPIK-----PGISV 618
Query: 476 I 476
+
Sbjct: 619 L 619
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 200/390 (51%), Gaps = 12/390 (3%)
Query: 26 TATKSHHH--LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAY 83
T SH H + LL+ CT + Q+ IIK F N + T++ L ++S+ A
Sbjct: 41 TRVYSHRHPSVVLLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAAR 100
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG- 142
VF + ++ +++GYA+ + + +M+ + + Y LL+ CG
Sbjct: 101 ---VFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGE 157
Query: 143 --DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
DL++ + +H L++ + F S + +T +++ Y + +A +F++M K++V+WT
Sbjct: 158 NLDLKKGREIHGLII-TNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTT 216
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
++ G+ + + + + L +M+++G + + +TLVS+L A A++ A +G+ +H + ++
Sbjct: 217 LVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSG 276
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ AL DMY KCG A VFK + K V +WN++I G A +G EEA F
Sbjct: 277 FESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFL 336
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M G P VT++ VL AC++ G +E+G + + + K++ NV L+ + +
Sbjct: 337 KMLDEGEVPTRVTMMGVLLACANLGDLERGWFV-HKLLDKLKLDSNVSVMNSLISMYSKC 395
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ +D A + N +E V W +++ A
Sbjct: 396 KRVDIAASIFNN--LEKTNVTWNAMILGYA 423
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 178/488 (36%), Positives = 293/488 (60%), Gaps = 14/488 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LLQKC+ Q KQ+ A +I + + S T+L +L ++ + ++YA +F I PS
Sbjct: 7 LLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELC-AISSFGDLSYALHIFRYIPYPS 65
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDP-DSFTYPILLKACGDL---RQVKGV 150
T +N VIRG A + + Y M NGL D+ T LKAC + +
Sbjct: 66 TNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARSEAIQL 125
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
HS +++ FN+ + T L+ Y GD+ AQ LFD+M + ++ +W A+I G +
Sbjct: 126 HSQLLRF-GFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSR 184
Query: 211 YREGIDLFRKMR-DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ I F++M+ D + N +T+ L AC+ LGA + G+ VH+++ + + N ++
Sbjct: 185 PADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNVQVCN 244
Query: 270 ALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+ DMYAKCG +++A VF+ + +K++ TWN++I A+HG G +A+ +F ++ SG+
Sbjct: 245 VVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMS 304
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD V+ +AVL AC+HAGL+E G ++F +M + +EPN+KHYG +VDLL RA L EAY+
Sbjct: 305 PDAVSYLAVLCACNHAGLVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYD 363
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
++ ++P PN VLW +LL AC + D VE+AE+A +L+++ + G++VL+SN+YAA
Sbjct: 364 IVSSLPF-PNMVLWQTLLGACRTYGD---VEMAELASRKLVEMGFISCGDFVLLSNVYAA 419
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
+ +WDD G++R M+ R++ K PG S IEI +++F+ GD H EIY+ L+ + +
Sbjct: 420 RQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLR 479
Query: 509 LREECYAA 516
++ Y+A
Sbjct: 480 IKAYGYSA 487
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 140/287 (48%), Gaps = 7/287 (2%)
Query: 134 YPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF--YCNFGDVKSAQLLFDQMT 191
+ +LL+ C Q+K + + ++ + DF+ S T+L+ +FGD+ A +F +
Sbjct: 4 FNLLLQKCSSFSQIKQLQANLIINGDFH-FSSSRTKLLELCAISSFGDLSYALHIFRYIP 62
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV--EVNELTLVSVLSACANLGASELG 249
+ W A+I G + + +R M S ++ LT L ACA A
Sbjct: 63 YPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARSEA 122
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
+H + + + L L D YAK G ++ A ++F + + ++ +WN++I G A
Sbjct: 123 IQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQG 182
Query: 310 GCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
+A+ F +M++ G ++P+ VT+ L ACS G +++G+ + + + K+ NV+
Sbjct: 183 SRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEE-KLNSNVQ 241
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
++D+ + +D+AY V NM + + + W +++ A A DG
Sbjct: 242 VCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDG 288
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 271/497 (54%), Gaps = 38/497 (7%)
Query: 54 IKASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLG 112
++ +FD + D +I L ++ A L+ Q ++ ++I Y+ A
Sbjct: 100 VRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRA 159
Query: 113 HRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLV--------------- 154
+ + M+ G+ PD T +L AC L+ ++ +H LV
Sbjct: 160 KEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVAL 219
Query: 155 ----VKSKDFN---SVIHSLTR---------LITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
K DF V ++ R +I YC G V A+ LFDQM ++++T+
Sbjct: 220 IDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITF 279
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
+MI G++ RE + LF MR + V+ T+VS+LSACA+LGA G+ +H +
Sbjct: 280 NSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIEL 339
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+ + +G AL DMY KCG + EA VF+ + +++V W ++I GLA +G G+ ++
Sbjct: 340 RLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEY 399
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
F+QM+ G +P+ V+ IAVLTACSH+ L+ +G+ F MR Y + P ++HYGC++DLL
Sbjct: 400 FYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLG 459
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGN 438
R+ LLDEA ++++ MPM+PN+V+W S+L+AC ++LA+ A E L+K+EP D
Sbjct: 460 RSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHK---RIDLAQCAAEHLLKIEPDEDAV 516
Query: 439 YVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
YV + NI +W+DA K+R LM+ER + K G S + + VH+F+V D HP EI
Sbjct: 517 YVQLYNICIDSRKWEDASKIRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEI 576
Query: 499 YSMLEYVAISLREECYA 515
+MLE ++ L+ Y+
Sbjct: 577 IAMLEEISHRLKSAGYS 593
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 213/444 (47%), Gaps = 15/444 (3%)
Query: 43 LVQFKQVHAQIIKASF--DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFN 100
L Q +Q+H ++KA + N +S++ L L ++ +S A N I++ ++N
Sbjct: 849 LEQGRQLHGVVLKAGWIPSNIFLSNS-LVDLYSAIGDSVDTVKA---LNDILSEDVISWN 904
Query: 101 TVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK---ACGDLRQVKGVHSLVVKS 157
+++ YA+ G + QM+ +G P ++ LL GD + +H +V K
Sbjct: 905 SILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHKL 964
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
S +H T LI Y + +F+++ + ++I + + +++
Sbjct: 965 GFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLGCNMFDAALEI 1024
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELG--KWVHEFVNKNCIILNDKLGAALTDMY 275
M GV +++T + + A + + L + +H + K ++ + ++L Y
Sbjct: 1025 LHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAY 1084
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
A G + + +F+ +L+ NV + +II A +G G A+++F QM SG+KPD+VT +
Sbjct: 1085 ACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFL 1144
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
+ C AG+ E+G+ + MR +++P+ +H+ C+V+LL R + EA E++ P+
Sbjct: 1145 CAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPL 1204
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
W SLL +C + G NV L + A LI + + + +SN + + A
Sbjct: 1205 RHYTKAWSSLLQSCKA--HGENV-LGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETA 1261
Query: 456 GKMRRLMKERNIVKNPGCSVIEIN 479
+++ + + VK G S+IE++
Sbjct: 1262 LRIKEMTNVKE-VKKSGHSLIEVS 1284
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 146/318 (45%), Gaps = 59/318 (18%)
Query: 95 STFAFNTVIRGYAEAGL--GHRGIQ--LYTQMIGNGLDPDSFTYPILLKACGDLR----- 145
STF F+T +R AG G I L+ +M + PD FT+ L K R
Sbjct: 4 STFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALL 63
Query: 146 ----QVKGVHSLVVKSKDF--NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
+ +++ + F NS+IH T L GDV+ A FD++ K+ V+WT
Sbjct: 64 CTMLHAACLRTMLPSAAPFVANSLIHMYTELGLA----GDVRRA---FDEIPVKDAVSWT 116
Query: 200 AMING-------------------------------HVKQKNYREGIDLFRKMRDSGVEV 228
+I+G + + +E +D F+ M G+
Sbjct: 117 MVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAP 176
Query: 229 NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
+++T++ VLSAC+ L ELG +H V + + +++ L AL DMYAKCG A VF
Sbjct: 177 DDVTVIGVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVF 236
Query: 289 KIVLE-KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
V + +WN+II G HG + A +F QM++ I +T +++T H+G +
Sbjct: 237 DAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDI----ITFNSMITGYIHSGQL 292
Query: 348 EKGKEIFYNMRR-DYKVE 364
+ +F NMRR D +V+
Sbjct: 293 REALLLFMNMRRHDLRVD 310
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 165/355 (46%), Gaps = 43/355 (12%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GD 143
+F ++ +T N V+RG L I + M L+ + +Y +K C G+
Sbjct: 788 LFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGE 847
Query: 144 -LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD-VKSAQLLFDQMTEKNVVTWTAM 201
L Q + +H +V+K+ S I L+ Y GD V + + L D ++E +V++W ++
Sbjct: 848 WLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSE-DVISWNSI 906
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK--- 258
++ + + + +E + ++M G + + VS+L+ G +LG +H V+K
Sbjct: 907 LSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHKLGF 966
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG--EEAV 316
+C ++ + L DMY KC + +L +F + + NS+I + GC + A+
Sbjct: 967 SCSSVH--VQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLI--TSSLGCNMFDAAL 1022
Query: 317 KMFWQMQMSGIKPDDVTLIAV-----------LTACS--HAGLIEKGKEIFYNMRRDYKV 363
++ M + G+ PDDVT A LT+C H+ L++ G E+ D V
Sbjct: 1023 EILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEM------DMAV 1076
Query: 364 EPN-VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ + Y C A L ++ + + ++PN + + ++++ACA DGA
Sbjct: 1077 CSSLITAYAC-------AGQLSSSHLIFEGL-LDPNVICFTAIISACARYGDGAR 1123
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 169/473 (35%), Positives = 269/473 (56%), Gaps = 14/473 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
KQ+H +I ++ D L LI + + A VF+ + + ++ +I G
Sbjct: 552 KQIHGRITESGLQ----LDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGG 607
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSK-DFN 161
A+ G + I+L+ QM G P T+ +LK C L + K V + ++ S + +
Sbjct: 608 CADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELD 667
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
+ + + LI+ Y G + A+ +FD+M +++V+W +I G+ + + ++ +M
Sbjct: 668 TGVGNA--LISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQM 725
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
++ V N+ + VS+L+AC++ A E GK VH + K + + ++GAAL MYAKCG
Sbjct: 726 QEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQ 785
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
EA VF ++EKNV TWN++I A HG +A+ F M+ GIKPD T ++L+AC
Sbjct: 786 GEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSAC 845
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
+HAGL+ +G +IF +M +Y V P ++HYGCLV LL RAR EA +I MP P+A +
Sbjct: 846 NHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAV 905
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
W +LL AC N+ LAE A +KL N Y+L+SN+YAA +WDD K+RR+
Sbjct: 906 WETLLGACRIH---GNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRV 962
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
M+ R I K PG S IE+++++HEF+ D HP + EIY+ L+ +++ + E Y
Sbjct: 963 MEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGY 1015
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 195/386 (50%), Gaps = 16/386 (4%)
Query: 33 HLPLLQKCT---HLVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVF 88
+L +L C+ L K +H+ I S D + SD Q+ LI + A +F
Sbjct: 333 YLSILNACSTSKALEAGKLIHSHI---SEDGHS-SDVQIGNALISMYARCGDLPKARELF 388
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV- 147
+ ++N +I GYA ++LY QM G+ P T+ LL AC +
Sbjct: 389 YTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYA 448
Query: 148 --KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
K +H +++S S H L+ Y G + AQ +F+ ++V++W +MI GH
Sbjct: 449 DGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGH 507
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ +Y LF++M++ +E + +T SVLS C N A ELGK +H + ++ + L+
Sbjct: 508 AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDV 567
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
LG AL +MY +CG +++A VF + ++V +W ++IGG A G +A+++FWQMQ
Sbjct: 568 NLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNE 627
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
G +P T ++L C+ + +++GK++ Y + Y+++ V + L+ ++ +
Sbjct: 628 GFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGN--ALISAYSKSGSMT 685
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTACA 410
+A EV MP + V W ++ A
Sbjct: 686 DAREVFDKMPSR-DIVSWNKIIAGYA 710
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 207/404 (51%), Gaps = 14/404 (3%)
Query: 18 ANSHKNSNTATKSHHHLPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKL-IE 73
+N+H+ T T+ ++ LLQ CT L + K++HAQ+++A D L+ L I
Sbjct: 15 SNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVG----PDIFLSNLLIN 70
Query: 74 SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFT 133
V + AH VF ++ ++N++I YA+ G + QL+ +M G P+ T
Sbjct: 71 MYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKIT 130
Query: 134 YPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
Y +L AC +L K +HS ++K+ + L++ Y GD+ A+ +F +
Sbjct: 131 YISILTACYSPAELENGKKIHSQIIKA-GYQRDPRVQNSLLSMYGKCGDLPRARQVFAGI 189
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
+ ++VV++ M+ + ++ +E + LF +M G+ +++T +++L A + GK
Sbjct: 190 SPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGK 249
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
+H+ + + + ++G AL M +CG ++ A + FK +++V +N++I LA HG
Sbjct: 250 RIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHG 309
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
EA + +++M+ G+ + T +++L ACS + +E GK I ++ D +V+
Sbjct: 310 HNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH-SSDVQIG 368
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
L+ + R L +A E+ MP + + + W +++ A +D
Sbjct: 369 NALISMYARCGDLPKARELFYTMP-KRDLISWNAIIAGYARRED 411
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 200/386 (51%), Gaps = 15/386 (3%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
L + K++H ++ + SD ++ L+ V + A F + +N
Sbjct: 245 LDEGKRIHKLTVEEGLN----SDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNA 300
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSK 158
+I A+ G + Y +M +G+ + TY +L AC L K +HS + S+
Sbjct: 301 LIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHI--SE 358
Query: 159 D-FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
D +S + LI+ Y GD+ A+ LF M ++++++W A+I G+ ++++ E + L
Sbjct: 359 DGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRL 418
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
+++M+ GV+ +T + +LSACAN A GK +HE + ++ I N L AL +MY +
Sbjct: 419 YKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRR 478
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG + EA VF+ ++V +WNS+I G A HG E A K+F +MQ ++PD++T +V
Sbjct: 479 CGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASV 538
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
L+ C + +E GK+I + + ++ +V L+++ R L +A V ++
Sbjct: 539 LSGCKNPEALELGKQIHGRI-TESGLQLDVNLGNALINMYIRCGSLQDARNVFHSL-QHR 596
Query: 398 NAVLWGSLLTACASADDGANVELAEI 423
+ + W +++ C AD G +++ E+
Sbjct: 597 DVMSWTAMIGGC--ADQGEDMKAIEL 620
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 193/385 (50%), Gaps = 14/385 (3%)
Query: 33 HLPLLQKC---THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNS-SQIAYAHLVF 88
++ +L C L K++H+QIIKA + D ++ + S+ + A VF
Sbjct: 131 YISILTACYSPAELENGKKIHSQIIKAGYQR----DPRVQNSLLSMYGKCGDLPRARQVF 186
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LR 145
I ++NT++ YA+ + L+ QM G+ PD TY LL A L
Sbjct: 187 AGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLD 246
Query: 146 QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
+ K +H L V+ + NS I T L+T GDV SA+ F +++VV + A+I
Sbjct: 247 EGKRIHKLTVE-EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAAL 305
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ + E + + +MR GV +N T +S+L+AC+ A E GK +H ++++ +
Sbjct: 306 AQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDV 365
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
++G AL MYA+CG + +A +F + ++++ +WN+II G A EA++++ QMQ
Sbjct: 366 QIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSE 425
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G+KP VT + +L+AC+++ GK I ++ R ++ N L+++ R L E
Sbjct: 426 GVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLME 484
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACA 410
A V + + W S++ A
Sbjct: 485 AQNVFEGTQAR-DVISWNSMIAGHA 508
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 152/293 (51%), Gaps = 8/293 (2%)
Query: 133 TYPILLKACGDLR---QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
TY LL+ C R + K +H+ +V++ + S LI Y V A +F +
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLS-NLLINMYVKCRSVLDAHQVFKE 87
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
M ++V++W ++I+ + +Q ++ LF +M+++G N++T +S+L+AC + E G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
K +H + K + ++ +L MY KCG + A +VF + ++V ++N+++G A
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK 207
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
+E + +F QM GI PD VT I +L A + ++++GK I + + + + +++
Sbjct: 208 AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRI-HKLTVEEGLNSDIRV 266
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
LV + R +D A + + + + V++ +L+ A A G NVE E
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGTA-DRDVVVYNALIAAL--AQHGHNVEAFE 316
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 284/500 (56%), Gaps = 29/500 (5%)
Query: 36 LLQKCTHLVQF---KQVHAQIIK-ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
+L C+HL K++HA +K S D + + L ++ N Q+ VF+ +
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL---VDMYCNCKQVLSGRRVFDGM 364
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKAC---GDLRQV 147
+ +N +I GY++ + L+ M + GL +S T ++ AC G +
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 148 KGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+ +H VVK D + + + L+ Y G + A +F +M ++++VTW MI G+V
Sbjct: 425 EAIHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482
Query: 207 KQKNYREGIDLFRKMRD-----------SGVEVNELTLVSVLSACANLGASELGKWVHEF 255
+++ + + L KM++ ++ N +TL+++L +CA L A GK +H +
Sbjct: 483 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 542
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
KN + + +G+AL DMYAKCG ++ + +VF + +KNV TWN II +HG G+EA
Sbjct: 543 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 602
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
+ + M + G+KP++VT I+V ACSH+G++++G IFY M+ DY VEP+ HY C+VD
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 662
Query: 376 LLCRARLLDEAYEVIRNMPMEPN-AVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
LL RA + EAY+++ MP + N A W SLL A + N+E+ EIA + LI+LEP
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN---NLEIGEIAAQNLIQLEPN 719
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+YVL++NIY++ WD A ++RR MKE+ + K PGCS IE D VH+F+ GD HP
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779
Query: 495 SEEIYSMLEYVAISLREECY 514
SE++ LE + +R+E Y
Sbjct: 780 SEKLSGYLETLWERMRKEGY 799
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 166/338 (49%), Gaps = 22/338 (6%)
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK 158
++R + L + Y MI G+ PD++ +P LLKA DL+ + K +H+ V K
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYK-- 125
Query: 159 DFNSVIHSLT---RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
F + S+T L+ Y GD + +FD+++E+N V+W ++I+ + + +
Sbjct: 126 -FGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASE---LGKWVHEFVNK----NCIILNDKLG 268
+ FR M D VE + TLVSV++AC+NL E +GK VH + + N I+N
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIIN---- 240
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
L MY K G + + + +++ TWN+++ L + EA++ +M + G++
Sbjct: 241 -TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD+ T+ +VL ACSH ++ GKE+ ++ ++ N LVD+ C + +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
V M + LW +++ + + L I ME
Sbjct: 360 VFDGM-FDRKIGLWNAMIAGYSQNEHDKEALLLFIGME 396
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 184/373 (49%), Gaps = 20/373 (5%)
Query: 47 KQVHAQIIKASF--DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
KQ+HA + K + D+ T+++T L+ + VF++I + ++N++I
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANT----LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG------VHSLVVKSK 158
++ + M+ ++P SFT ++ AC +L +G VH+ ++
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG 232
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
+ NS I + L+ Y G + S+++L +++VTW +++ + + E ++
Sbjct: 233 ELNSFI--INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL 290
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN-CIILNDKLGAALTDMYAK 277
R+M GVE +E T+ SVL AC++L GK +H + KN + N +G+AL DMY
Sbjct: 291 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 350
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS-GIKPDDVTLIA 336
C + RVF + ++ + WN++I G + + +EA+ +F M+ S G+ + T+
Sbjct: 351 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410
Query: 337 VLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
V+ AC +G + + I + ++R + V++ L+D+ R +D A + M
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKME- 467
Query: 396 EPNAVLWGSLLTA 408
+ + V W +++T
Sbjct: 468 DRDLVTWNTMITG 480
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 260/440 (59%), Gaps = 40/440 (9%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I L+ +++ A +F+++ ++NT++ GY +AG ++ L+ M P+
Sbjct: 18 MIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNKAFGLFESM------PE 71
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
R V S + +++ YC GD++ A++LFD+M
Sbjct: 72 --------------RNVV-----------------SWSTMVSGYCKAGDMEMARMLFDRM 100
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
KN+V+WT +++G+ + ++ I F +M ++G++ ++ T++S+L++CA G LGK
Sbjct: 101 PVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTVISILASCAESGLLGLGK 160
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
VH + + + + AL DMYAKCG ++ AL VF + +K++ +WN ++ GLA+HG
Sbjct: 161 RVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHG 220
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
GE+A+++F M+ G +PD VTL+AVL AC HAG +++G F NM RDY + P+++HY
Sbjct: 221 HGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHY 280
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
GC+VDLL R L EAY ++++MP+EPN V+WG+LL AC + V LAE ++ L K
Sbjct: 281 GCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRMHN---AVGLAEEVLDCLFK 337
Query: 431 LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
LEP + GNY L+SNI+A+ W +R MK I K G S IE++D VHEF V D
Sbjct: 338 LEPSDPGNYSLLSNIFASAGDWSSVANVRLQMKNFGIQKPSGASSIEVDDEVHEFTVFDK 397
Query: 491 RHPCSEEIYSMLEYVAISLR 510
HP S++IY M+ + + L+
Sbjct: 398 SHPKSDKIYQMINRLGLDLK 417
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
+R+FK++ E++V +WNS+I GL G EA K+F +M M D V+ +L A
Sbjct: 1 MRLFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMK----DAVSWNTILDGYVKA 56
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
G + K +F +M E NV + +V C+A ++ A + MP++ N V W
Sbjct: 57 GEMNKAFGLFESMP-----ERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVK-NLVSWTI 110
Query: 405 LLTACA 410
+++ A
Sbjct: 111 IVSGYA 116
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 260/482 (53%), Gaps = 9/482 (1%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
+ C + +++HA++ K+ QL L + A +F+ + +
Sbjct: 49 VNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAED---ALKLFDDMPHKDL 105
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-GDLRQVKGVHSLVV 155
++N++I G++ L YT + P+ T ++ AC G L K +H +
Sbjct: 106 VSWNSLISGFSRC-LHMSLTAFYTMKFEMSVKPNEVTILSMISACSGALDAGKYIHGFGI 164
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
K V LI Y GD+ SA LF+ + + N V+W ++I V REGI
Sbjct: 165 KVGGTLEV-KVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGI 223
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
D F KMR G+E +E T++++L AC +LG +L + +H + + AL D Y
Sbjct: 224 DYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTY 283
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
AK G + + VF V + W +++ G A HG G EA+K+F M G++PD VT
Sbjct: 284 AKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFT 343
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
+L+ACSH+GL+ +GK F M Y +EP V HY C+VDLL R LL++AYEVI+NMPM
Sbjct: 344 HLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPM 403
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
EPNA +WG+LL AC N+EL + E LI +EP + NY+++SN+Y+A W DA
Sbjct: 404 EPNAGVWGALLGACRVH---GNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDA 460
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
K+R L+KER + + PG S IE + H F VGD HP +E+IYS LE + +R+ Y+
Sbjct: 461 AKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYS 520
Query: 516 AR 517
++
Sbjct: 521 SK 522
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 284/500 (56%), Gaps = 29/500 (5%)
Query: 36 LLQKCTHLVQF---KQVHAQIIK-ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
+L C+HL K++HA +K S D + + L ++ N Q+ VF+ +
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL---VDMYCNCKQVLSGRRVFDGM 364
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKAC---GDLRQV 147
+ +N +I GY++ + L+ M + GL +S T ++ AC G +
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 148 KGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+ +H VVK D + + + L+ Y G + A +F +M ++++VTW MI G+V
Sbjct: 425 EAIHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482
Query: 207 KQKNYREGIDLFRKMRD-----------SGVEVNELTLVSVLSACANLGASELGKWVHEF 255
+++ + + L KM++ ++ N +TL+++L +CA L A GK +H +
Sbjct: 483 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 542
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
KN + + +G+AL DMYAKCG ++ + +VF + +KNV TWN II +HG G+EA
Sbjct: 543 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 602
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
+ + M + G+KP++VT I+V ACSH+G++++G IFY M+ DY VEP+ HY C+VD
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 662
Query: 376 LLCRARLLDEAYEVIRNMPMEPN-AVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
LL RA + EAY+++ MP + N A W SLL A + N+E+ EIA + LI+LEP
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN---NLEIGEIAAQNLIQLEPN 719
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+YVL++NIY++ WD A ++RR MKE+ + K PGCS IE D VH+F+ GD HP
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779
Query: 495 SEEIYSMLEYVAISLREECY 514
SE++ LE + +R+E Y
Sbjct: 780 SEKLSGYLETLWERMRKEGY 799
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 166/338 (49%), Gaps = 22/338 (6%)
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK 158
++R + L + Y MI G+ PD++ +P LLKA DL+ + K +H+ V K
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYK-- 125
Query: 159 DFNSVIHSLT---RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
F + S+T L+ Y GD + +FD+++E+N V+W ++I+ + + +
Sbjct: 126 -FGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASE---LGKWVHEFVNK----NCIILNDKLG 268
+ FR M D VE + TLVSV++AC+NL E +GK VH + + N I+N
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIIN---- 240
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
L MY K G + + + +++ TWN+++ L + EA++ +M + G++
Sbjct: 241 -TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD+ T+ +VL ACSH ++ GKE+ ++ ++ N LVD+ C + +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
V M + LW +++ + + L I ME
Sbjct: 360 VFDGM-FDRKIGLWNAMIAGYSQNEHDKEALLLFIGME 396
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 184/373 (49%), Gaps = 20/373 (5%)
Query: 47 KQVHAQIIKASF--DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
KQ+HA + K + D+ T+++T L+ + VF++I + ++N++I
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANT----LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG------VHSLVVKSK 158
++ + M+ ++P SFT ++ AC +L +G VH+ ++
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG 232
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
+ NS I + L+ Y G + S+++L +++VTW +++ + + E ++
Sbjct: 233 ELNSFI--INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL 290
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN-CIILNDKLGAALTDMYAK 277
R+M GVE +E T+ SVL AC++L GK +H + KN + N +G+AL DMY
Sbjct: 291 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 350
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS-GIKPDDVTLIA 336
C + RVF + ++ + WN++I G + + +EA+ +F M+ S G+ + T+
Sbjct: 351 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410
Query: 337 VLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
V+ AC +G + + I + ++R + V++ L+D+ R +D A + M
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKME- 467
Query: 396 EPNAVLWGSLLTA 408
+ + V W +++T
Sbjct: 468 DRDLVTWNTMITG 480
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 283/521 (54%), Gaps = 49/521 (9%)
Query: 37 LQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L C+ L K Q+H I K+ + ++ + LI+ + A VF+ +
Sbjct: 163 LSACSRLKDLKLGAQIHGLISKSKY---SLDVFMGSGLIDFYSKCGLVGCARRVFDGMEE 219
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GV 150
+ ++N +I Y + G ++ + +M G PD T ++ AC L K +
Sbjct: 220 KNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQI 279
Query: 151 HSLVVKSKDF-------NSVIH------------------------SLTRLITFYCNFGD 179
H+ VVKS F N+++ S T +++ Y
Sbjct: 280 HARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSAS 339
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
VK+A+ +F + +K++V+W A+I G+ + E + LFR ++ V T ++L+A
Sbjct: 340 VKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNA 399
Query: 240 CANLGASELGKWVHEFVNKNCIILNDK------LGAALTDMYAKCGYIEEALRVFKIVLE 293
ANL ELG+ H V K+ +G +L DMY KCG +EE LRVF+ ++E
Sbjct: 400 SANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVE 459
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
K+ +WN++I G A +G G EA+++F +M SG KPD VT+I L ACSHAGL+E+G+
Sbjct: 460 KDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRY 519
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F++M +++ + P HY C+VDLL RA L+EA ++I +MP +P+AV+W SLL+AC
Sbjct: 520 FFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVH- 578
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
N+ L + E++ +++P + G YVL++N+Y+ +W DA +R+LM+ R +VK PGC
Sbjct: 579 --RNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGC 636
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
S I+I VH FMV D RHP +EIYS+L+ + +R+ Y
Sbjct: 637 SWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGY 677
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 206/475 (43%), Gaps = 81/475 (17%)
Query: 28 TKSHHHLPLLQKCTHLVQ---FKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYA 84
T S LL C L + VH ++I+ F +LI+ + YA
Sbjct: 22 TDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQN---RLIDVYGKCGYLDYA 78
Query: 85 HLVFNQIINPSTFAFNTVI-------------------------------RGYAEAGLGH 113
VF+++ + F+FN++I G+A+
Sbjct: 79 RKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFE 138
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRL 170
+ + +M + + +++ L AC L+ +K +H L+ KSK ++ + + L
Sbjct: 139 EALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSK-YSLDVFMGSGL 197
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNE 230
I FY G V A+ +FD M EKNVV+W +I + + E ++ F +M + G + +E
Sbjct: 198 IDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDE 257
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK-LGAALTDMYAKCGYIEEALRVFK 289
+TL SV+SACA L A + G +H V K+ ND LG AL DMYAKCG + EA VF
Sbjct: 258 VTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFD 317
Query: 290 -------------------------------IVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+ +K++ +WN++I G +G EEA+ +
Sbjct: 318 RMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGL 377
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE-----IFYNMRRDYKVEPNVKHYGCL 373
F ++ + P T +L A ++ +E G++ + + R EP++ L
Sbjct: 378 FRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSL 437
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
+D+ + ++E V NM +E + V W +++ A +G +E E+ + L
Sbjct: 438 IDMYMKCGSVEEGLRVFENM-VEKDHVSWNTMII--GYAQNGYGMEALELFQKML 489
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 160/308 (51%), Gaps = 14/308 (4%)
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
FNS+I +L R +G V + LF M EK+ +W +MI G + + E +D F
Sbjct: 93 FNSIISTLMR-------WGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFV 145
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
+M +N+ + S LSAC+ L +LG +H ++K+ L+ +G+ L D Y+KCG
Sbjct: 146 RMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCG 205
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
+ A RVF + EKNV +WN +I +G EA++ F +M G KPD+VTL +V++
Sbjct: 206 LVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVS 265
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
AC+ ++G +I + + K ++ LVD+ + ++EA V MP+ NA
Sbjct: 266 ACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR-NA 324
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
V ++++ A + A+V+ A +M IK + N ++ Y + ++A +
Sbjct: 325 VSETTMVSGYAKS---ASVKAAR-SMFATIKQKDIVSWNALIAG--YTQNGENEEALGLF 378
Query: 460 RLMKERNI 467
R++K ++
Sbjct: 379 RMLKRESV 386
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 274/513 (53%), Gaps = 41/513 (7%)
Query: 35 PLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINP 94
P T +Q H+Q+I+ + +L + + S YA + +P
Sbjct: 10 PTPVPLTSFALLRQHHSQLIRLGVASHAAHARRLLSFL-ARDPDSHFPYASRLLAHHPDP 68
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLV 154
FN + +L M+ L PD FT+P +L + L V +H+L+
Sbjct: 69 HPALFNPLFSALPT----RHAARLLALMLSLPLRPDHFTFPQILPSAQPLHLVAQLHALL 124
Query: 155 VK---------------------SKDFNSVIH----------SLTRLITFYCNFGDVKSA 183
+K D S + S T ++ G A
Sbjct: 125 LKLGFHAHTQSLNALLAAYLANARPDLASRVFRGGGGALDVVSWTTMVGGLLKLGLFDDA 184
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
++LFD M E+N+V+W AM++G+VK + + +++F +MR GV+ N + + AC
Sbjct: 185 RVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAVVACTGA 244
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV--LEKNVCTWNS 301
GA G+ VH +V ++ I +++KL A+ DMY KCG +EEA RVF+ + K + TWN
Sbjct: 245 GALARGREVHRWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNC 304
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+IGG A+HG GE+A+K+F +M+ G+ PDDVTL+ VLTAC+HAG++ +G+ F + + Y
Sbjct: 305 MIGGFAVHGRGEDALKLFGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRY 364
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
+EP ++HYGC+VDL RA L+EA +VI++MPMEP+ + G+L A D V+L
Sbjct: 365 GIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHGD---VDLG 421
Query: 422 EIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
E R+I+L+P N G YVL++N+ A +W+D ++RRLM ERN+ K G SVIE+
Sbjct: 422 EAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQGE 481
Query: 482 VHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
V EF G HP +EE+Y+M + +R E Y
Sbjct: 482 VCEFQCGGLCHPRAEEVYAMARDMMREIRAEGY 514
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 292/512 (57%), Gaps = 39/512 (7%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LLQ + + KQ+H + F + + LI+ V++ A +F+++ +
Sbjct: 134 LYLLQTTKFVAEVKQIHCHAL--VFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSD 191
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GV 150
+ ++NT+I G+A+ G ++L+ M +GL+PD FT LL CG L + K V
Sbjct: 192 RNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSV 251
Query: 151 HSLVVKS--------------------------KDFNSVIH----SLTRLITFYCNFGDV 180
H+ + KS K F+ + S +I Y G++
Sbjct: 252 HAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGEL 311
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
+ A LF+Q+ +++V+W ++I+G+ + +Y LF +M V+ +++T+V+++SA
Sbjct: 312 ELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAV 371
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A +GA + G+W+H K + G+AL DMY KCG IE A +F + EK+V TW
Sbjct: 372 AEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWT 431
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
++I G A HG G +A+++F MQ + KP+DVT ++VL ACSH+GL+++G +IF +M++
Sbjct: 432 TMITGFAFHGFGNKALELFSVMQ-AETKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKR 490
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
Y +EP V+HYGCLVDLLCR+ L +A VI MPMEP+ +WG++L+AC N+EL
Sbjct: 491 YSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMH---RNMEL 547
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
AE A+ L+KLEP +G Y+L+SN+YA +W + +R +M R + K GCS + ++
Sbjct: 548 AERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAVDG 607
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
+VH+F + +HP +I S+L ++ +R E
Sbjct: 608 MVHDFTASNKQHPRWMDICSILSFLTNEMRLE 639
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 200/413 (48%), Gaps = 37/413 (8%)
Query: 30 SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
+H L LL+KC QFKQ+ +++ + +T ++L ++ + + A L+FN
Sbjct: 31 NHPSLILLEKCNSRTQFKQILGHMMRNNLVGQTFPMSRLL-FFSAVSHPENLELAILLFN 89
Query: 90 QIIN-PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK 148
P+ + FNT+I G+ + + +Y M+ NG PD T+ LL+ + +VK
Sbjct: 90 HFTPYPNLYIFNTMILGFPFSN--EKAFTIYRSMLQNGTYPDRQTFLYLLQTTKFVAEVK 147
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
+H + + + LI Y + G + A+ LFD+M+++NVV++ MI G K
Sbjct: 148 QIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKV 207
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
N ++LF MR G+E ++ T++ +L C LG ++LGK VH + K+ N L
Sbjct: 208 GNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILY 267
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF--------- 319
AL DMY KC ++ A +VF +EK+ +WN+II G A G E A +F
Sbjct: 268 NALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIV 327
Query: 320 -WQMQMSG---------------------IKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
W +SG +KPD VT++ +++A + G +++G+ I + +
Sbjct: 328 SWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWI-HGL 386
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ L+D+ C+ ++ A+ + +P E + W +++T A
Sbjct: 387 AVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIP-EKDVTTWTTMITGFA 438
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 284/500 (56%), Gaps = 29/500 (5%)
Query: 36 LLQKCTHLVQF---KQVHAQIIK-ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
+L C+HL K++HA +K S D + + L ++ N Q+ VF+ +
Sbjct: 221 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL---VDMYCNCKQVLSGRRVFDGM 277
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKAC---GDLRQV 147
+ +N +I GY++ + L+ M + GL +S T ++ AC G +
Sbjct: 278 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 337
Query: 148 KGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+ +H VVK D + + + L+ Y G + A +F +M ++++VTW MI G+V
Sbjct: 338 EAIHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 395
Query: 207 KQKNYREGIDLFRKMRD-----------SGVEVNELTLVSVLSACANLGASELGKWVHEF 255
+++ + + L KM++ ++ N +TL+++L +CA L A GK +H +
Sbjct: 396 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 455
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
KN + + +G+AL DMYAKCG ++ + +VF + +KNV TWN II +HG G+EA
Sbjct: 456 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 515
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
+ + M + G+KP++VT I+V ACSH+G++++G IFY M+ DY VEP+ HY C+VD
Sbjct: 516 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 575
Query: 376 LLCRARLLDEAYEVIRNMPMEPN-AVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
LL RA + EAY+++ MP + N A W SLL A + N+E+ EIA + LI+LEP
Sbjct: 576 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN---NLEIGEIAAQNLIQLEPN 632
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+YVL++NIY++ WD A ++RR MKE+ + K PGCS IE D VH+F+ GD HP
Sbjct: 633 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 692
Query: 495 SEEIYSMLEYVAISLREECY 514
SE++ LE + +R+E Y
Sbjct: 693 SEKLSGYLETLWERMRKEGY 712
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 184/373 (49%), Gaps = 20/373 (5%)
Query: 47 KQVHAQIIKASF--DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
KQ+HA + K + D+ T+++T L+ + VF++I + ++N++I
Sbjct: 30 KQIHAHVYKFGYGVDSVTVANT----LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 85
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG------VHSLVVKSK 158
++ + M+ ++P SFT ++ AC +L +G VH+ ++
Sbjct: 86 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG 145
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
+ NS I + L+ Y G + S+++L +++VTW +++ + + E ++
Sbjct: 146 ELNSFI--INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL 203
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN-CIILNDKLGAALTDMYAK 277
R+M GVE +E T+ SVL AC++L GK +H + KN + N +G+AL DMY
Sbjct: 204 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 263
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS-GIKPDDVTLIA 336
C + RVF + ++ + WN++I G + + +EA+ +F M+ S G+ + T+
Sbjct: 264 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 323
Query: 337 VLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
V+ AC +G + + I + ++R + V++ L+D+ R +D A + M
Sbjct: 324 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKME- 380
Query: 396 EPNAVLWGSLLTA 408
+ + V W +++T
Sbjct: 381 DRDLVTWNTMITG 393
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 159/318 (50%), Gaps = 22/318 (6%)
Query: 122 MIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLT---RLITFYC 175
MI G+ PD++ +P LLKA DL+ + K +H+ V K F + S+T L+ Y
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYK---FGYGVDSVTVANTLVNLYR 57
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
GD + +FD+++E+N V+W ++I+ + + ++ FR M D VE + TLVS
Sbjct: 58 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 117
Query: 236 VLSACANLGASE---LGKWVHEFVNK----NCIILNDKLGAALTDMYAKCGYIEEALRVF 288
V++AC+NL E +GK VH + + N I+N L MY K G + + +
Sbjct: 118 VVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIIN-----TLVAMYGKLGKLASSKVLL 172
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
+++ TWN+++ L + EA++ +M + G++PD+ T+ +VL ACSH ++
Sbjct: 173 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 232
Query: 349 KGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
GKE+ ++ ++ N LVD+ C + + V M + LW +++
Sbjct: 233 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAG 291
Query: 409 CASADDGANVELAEIAME 426
+ + L I ME
Sbjct: 292 YSQNEHDKEALLLFIGME 309
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 166/486 (34%), Positives = 267/486 (54%), Gaps = 55/486 (11%)
Query: 68 LAKLIESLVNSS--QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN 125
L + S NSS + AH VF I +PST +N +IR +A + + IQ + QM+
Sbjct: 61 LGDFLPSGSNSSAHHLLSAHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLT 120
Query: 126 GLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNF----- 177
PD+ TY LL AC LR+ + VHS V+ + ++S + +++L+ FY
Sbjct: 121 DSRPDAHTYSFLLAACTSSLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEG 180
Query: 178 -------------------------------GDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
G++ A+ +F +M E+NVV+WT MI+G+
Sbjct: 181 AALASARKVFDDMSERNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYA 240
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
K ++ ++LF +MR +GVE++++ L++ L+ACA LG ++G W+H ++ + N +
Sbjct: 241 KNGKCKQALNLFDQMRKAGVELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQR 300
Query: 267 ----LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
L AL MYA CG I+EA VF+ + E++ +W S+I A G + +++F M
Sbjct: 301 VLVSLNNALIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSM 360
Query: 323 QMSGI---KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
Q G +PD +T I VL ACSHAGL+++G+++F +M + + ++P ++HYGC+VDLL R
Sbjct: 361 QRLGTSEARPDGITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDLLSR 420
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFND--- 436
A LDEA E+I MP++PN +WG+LL C N ELA + ++L+ EP D
Sbjct: 421 AGFLDEAQELIATMPVKPNNAVWGALLGGCRFYR---NAELASLVSQKLVA-EPDPDKAA 476
Query: 437 GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSE 496
G L++ +YA+ +W D +R+ M + K G S ++IN+V H+ + GD H +
Sbjct: 477 GYLSLLAQVYASAEKWQDVATVRQKMVAMGVKKPAGQSWVQINEVFHDSVAGDRTHENTS 536
Query: 497 EIYSML 502
IY ML
Sbjct: 537 SIYEML 542
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 292/512 (57%), Gaps = 39/512 (7%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LLQ + + KQ+H + F + + LI+ V++ A +F+++ +
Sbjct: 69 LYLLQTTKFVAEVKQIHCHAL--VFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSD 126
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GV 150
+ ++NT+I G+A+ G ++L+ M +GL+PD FT LL CG L + K V
Sbjct: 127 RNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSV 186
Query: 151 HSLVVKS--------------------------KDFNSVIH----SLTRLITFYCNFGDV 180
H+ + KS K F+ + S +I Y G++
Sbjct: 187 HAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGEL 246
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
+ A LF+Q+ +++V+W ++I+G+ + +Y LF +M V+ +++T+V+++SA
Sbjct: 247 ELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAV 306
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A +GA + G+W+H K + G+AL DMY KCG IE A +F + EK+V TW
Sbjct: 307 AEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWT 366
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
++I G A HG G +A+++F MQ + KP+DVT ++VL ACSH+GL+++G +IF +M++
Sbjct: 367 TMITGFAFHGFGNKALELFSVMQ-AETKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKR 425
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
Y +EP V+HYGCLVDLLCR+ L +A VI MPMEP+ +WG++L+AC N+EL
Sbjct: 426 YSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMH---RNMEL 482
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
AE A+ L+KLEP +G Y+L+SN+YA +W + +R +M R + K GCS + ++
Sbjct: 483 AERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAVDG 542
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
+VH+F + +HP +I S+L ++ +R E
Sbjct: 543 MVHDFTASNKQHPRWMDICSILSFLTNEMRLE 574
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 174/359 (48%), Gaps = 36/359 (10%)
Query: 84 AHLVFNQIIN-PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG 142
A L+FN P+ + FNT+I G+ + + +Y M+ NG PD T+ LL+
Sbjct: 19 AILLFNHFTPYPNLYIFNTMILGFPFSN--EKAFTIYRSMLQNGTYPDRQTFLYLLQTTK 76
Query: 143 DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
+ +VK +H + + + LI Y + G + A+ LFD+M+++NVV++ MI
Sbjct: 77 FVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMI 136
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
G K N ++LF MR G+E ++ T++ +L C LG ++LGK VH + K+
Sbjct: 137 LGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGS 196
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF--- 319
N L AL DMY KC ++ A +VF +EK+ +WN+II G A G E A +F
Sbjct: 197 SNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQI 256
Query: 320 -------WQMQMSG---------------------IKPDDVTLIAVLTACSHAGLIEKGK 351
W +SG +KPD VT++ +++A + G +++G+
Sbjct: 257 PTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGR 316
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
I + + + L+D+ C+ ++ A+ + +P E + W +++T A
Sbjct: 317 WI-HGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIP-EKDVTTWTTMITGFA 373
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 161/480 (33%), Positives = 280/480 (58%), Gaps = 13/480 (2%)
Query: 37 LQKCTHLVQFKQVHAQIIKA-SFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
+ CT + +HA++IK+ ++ + I D +L+ A +F+++ N
Sbjct: 129 ISSCTSVSYCSAIHARVIKSLNYSDGFIGD----RLVSMYFKLGYDEDAQRLFDEMPNKD 184
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDPDSFTYPILLKACGD---LRQVKGVH 151
++N+++ G + G + + +M +G P+ T ++ AC D L + K +H
Sbjct: 185 LVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLH 244
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
+VVK + + LI Y G + +A LF++M +++V+W +M+ H
Sbjct: 245 GVVVK-LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYA 303
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
+G+DLF M+ +G+ ++ T+V++L AC + G + +H ++++ + + AL
Sbjct: 304 EKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATAL 363
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
++YAK G + + +F+ + +++ W +++ G A+H CG EA+K+F M G++ D
Sbjct: 364 LNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDH 423
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
VT +L+ACSH+GL+E+GK+ F M Y+VEP + HY C+VDLL R+ L++AYE+I+
Sbjct: 424 VTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIK 483
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
+MPMEP++ +WG+LL AC NVEL + E+L+ L+P + NY+++SNIY+A
Sbjct: 484 SMPMEPSSGVWGALLGACRVY---GNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGL 540
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
W DA K+R LMKER + +NPGCS IE + +H F+VGD HP S+EI++ LE + +RE
Sbjct: 541 WRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIRE 600
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 257/461 (55%), Gaps = 11/461 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+Q+HA +I+A + T +T + + V + A VF+Q+ A ++ GY
Sbjct: 204 RQIHAHVIRAGLCSNTSIETGIVNM---YVKCGWLVGAKRVFDQMAVKKPVACTGLMVGY 260
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSV 163
+AG ++L+ ++ G++ DSF + ++LKAC L ++ K +H+ V K S
Sbjct: 261 TQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAK-LGLESE 319
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ T L+ FY +SA F ++ E N V+W+A+I+G+ + + E + F+ +R
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 224 SGVEV-NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ N T S+ AC+ L +G VH K +I + +AL MY+KCG ++
Sbjct: 380 KNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLD 439
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+A VF+ + ++ W + I G A +G EA+++F +M G+KP+ VT IAVLTACS
Sbjct: 440 DANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACS 499
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
HAGL+E+GK M R Y V P + HY C++D+ R+ LLDEA + ++NMP EP+A+ W
Sbjct: 500 HAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSW 559
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
L+ C + N+EL EIA E L +L+P + YVL N+Y +W++A +M +LM
Sbjct: 560 KCFLSGCWTHK---NLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLM 616
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
ER + K CS I+ +H F+VGD HP ++EIY L+
Sbjct: 617 NERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLK 657
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 181/419 (43%), Gaps = 45/419 (10%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A +F+++ + + T+I YAE G+ + + L++ M+ +G P S Y LLK+ +
Sbjct: 137 ADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVN 196
Query: 144 LRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
R + + +H+ V+++ S T ++ Y G + A+ +FDQM K V T
Sbjct: 197 PRALDFGRQIHAHVIRA-GLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTG 255
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
++ G+ + R+ + LF + GVE + VL ACA+L LGK +H V K
Sbjct: 256 LMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLG 315
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ +G L D Y KC E A R F+ + E N +W++II G EEAVK F
Sbjct: 316 LESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFK 375
Query: 321 QMQMSGIKP-DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG--CLVDLL 377
++ + T ++ ACS G ++ + + + YG L+ +
Sbjct: 376 SLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG---SQYGESALITMY 432
Query: 378 CRARLLDEAYEVIRNMP----------------------------------MEPNAVLWG 403
+ LD+A EV +M M+PN+V +
Sbjct: 433 SKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFI 492
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
++LTAC+ A + M R + P D +Y M +IYA D+A K + M
Sbjct: 493 AVLTACSHAGLVEQGKHCLDTMLRKYNVAPTID-HYDCMIDIYARSGLLDEALKFMKNM 550
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 136/299 (45%), Gaps = 6/299 (2%)
Query: 113 HRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTR 169
+ + +M G+ S++Y L +AC +LR + + +H + + SV+
Sbjct: 65 NEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQ-NC 123
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
++ YC ++ A LFD+M+E N V+ T MI+ + +Q + + LF M SG +
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
++L + N A + G+ +H V + + N + + +MY KCG++ A RVF
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ K ++ G G +A+K+F + G++ D VL AC+ +
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
GK+I + + +E V LVD + + A + + EPN V W ++++
Sbjct: 304 GKQIHACVAK-LGLESEVSVGTPLVDFYIKCSSFESACRAFQEI-REPNDVSWSAIISG 360
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%)
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
K + E + ++M +GV V+ + + AC L + G+ +H+ + +
Sbjct: 60 KHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVL 119
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
L + MY +C +E+A ++F + E N + ++I A G ++AV +F M SG
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
KP +L + + ++ G++I ++ R
Sbjct: 180 DKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIR 212
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 291/532 (54%), Gaps = 54/532 (10%)
Query: 23 NSNTATKSHHHLPLLQKCTHLV----QFK-QVHAQIIKASFDNRTISDTQLAKLIESLVN 77
NS+ S LL+ C +++ QF QVH +++ F + + L+
Sbjct: 109 NSSVLPDSFTFPFLLKACANVLISAPQFGFQVHCHVLRNGFGSDVFVNN---ALLNFYCG 165
Query: 78 SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPIL 137
+ A+ VF++ +FNT+I G+A G +++ +M G + PD +T+ L
Sbjct: 166 FGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVAL 225
Query: 138 LKACG---DLRQVKGVHSLVVKS----------------------------------KDF 160
L C D R + VH LV + K
Sbjct: 226 LSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPG 285
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
SV+ + T L++ Y G+VK A+ LFDQM E++VV+WTAMI+G+ ++E ++LF K
Sbjct: 286 KSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVK 345
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVH-EFVNKN--CIILNDKLGAALTDMYAK 277
+ G++ +E+ +V+ LSACA LGA ELG+ +H ++ +N C I N +A+ DMYAK
Sbjct: 346 LEGLGMKPDEVAVVAALSACARLGALELGRRIHRQYAGENWTCSI-NRGFTSAVVDMYAK 404
Query: 278 CGYIEEALRVFKIVLE--KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
CG I+ AL VF+ + K +NSII GLA HG GE A +F +M + G+KPD++T +
Sbjct: 405 CGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFV 464
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
AVL+AC H GL++ GK++F +M Y V P ++HYGC+VDLL RA LDEA+ +I MP
Sbjct: 465 AVLSACGHCGLVDFGKKLFESMFTVYGVSPEMEHYGCMVDLLGRAGHLDEAHRLILKMPF 524
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
+ NAV+W +LL+AC D V LA +A L++L+ + YV++SN+ + Q D+A
Sbjct: 525 KANAVIWRALLSACKVHGD---VALARVASYELVELQHDHGAGYVMLSNMLSDTDQHDEA 581
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
+R+ + I K PG S +E+N +H+F+ GD HP ++ ML + I
Sbjct: 582 ASLRKAIDNVGIQKPPGWSYVEMNRSLHKFLAGDKSHPEAKTTELMLRDINI 633
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 211/445 (47%), Gaps = 49/445 (11%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LL C + Q Q++A II N T L S +S + ++H +F QI NP
Sbjct: 20 LLSSCKTMQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFTQITNPD 79
Query: 96 TFAFNTVIRGYAEA-GLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG----- 149
F +N +I+ Y++ L+ M+ + + PDSFT+P LLKAC ++
Sbjct: 80 IFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLISAPQFGFQ 139
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
VH V+++ F S + L+ FYC FGDV +A +FD+ ++ V++ MING ++
Sbjct: 140 VHCHVLRN-GFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKG 198
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK--NCIILNDKL 267
+ +F +MR V +E T V++LS C+ L +G+ VH V + C N L
Sbjct: 199 DVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLL 258
Query: 268 GAALTDMYAKCGY---------------------------------IEEALRVFKIVLEK 294
L DMYAKCG ++ A R+F + E+
Sbjct: 259 VNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGER 318
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
+V +W ++I G + GC +EA+++F +++ G+KPD+V ++A L+AC+ G +E G+ I
Sbjct: 319 DVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIH 378
Query: 355 YNMR-RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV-LWGSLLTACASA 412
++ N +VD+ + +D A +V R + L+ S+++ A
Sbjct: 379 RQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHH 438
Query: 413 DDGANVELAEIAMER--LIKLEPFN 435
G E A+ E L+ L+P N
Sbjct: 439 GRG---EYAKNLFEEMGLLGLKPDN 460
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 270/461 (58%), Gaps = 13/461 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS--TFAFNTVIRG 105
Q+HA +K + T L LI + S + A V + + T ++NT+I G
Sbjct: 114 QLHALSVKLGLSSDTFV---LNTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAG 170
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNS 162
Y AGL ++ +Q ++QM + D T L AC ++ K H+L+V + F
Sbjct: 171 YIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLV-TNGFEI 229
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ + LI+ Y G V+ A+ +FD M ++N V WT+MI+G+ + +E I LFR M+
Sbjct: 230 NCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQ 289
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+GV+V++ T+ +V+S+C +GA +LG++VH + + + + + + +L DMY+KCG I+
Sbjct: 290 IAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIK 349
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIKPDDVTLIAVLTAC 341
+A +F +++++ +W II G A +G EA+ +F QM + G+ P+++T + VLT+C
Sbjct: 350 KAYDIFCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSC 409
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SH GL+E+G F+ M Y + P ++HYGC+VDLL RA+LL EA + I+ MP+ P+AV+
Sbjct: 410 SHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVM 469
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
W SLL AC + + V LAE ER+ LEP G VL+S +YA ++W DA K+R
Sbjct: 470 WRSLLFACRTCGE---VGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTG 526
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
+ K PGCS IE++ VHEF GD H +E IYS L
Sbjct: 527 IYSGRKTKQPGCSFIEVDGCVHEFFAGDESHFETEAIYSTL 567
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/488 (34%), Positives = 280/488 (57%), Gaps = 15/488 (3%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L CT L KQ+H+++I+ L + + + VF Q+
Sbjct: 62 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 121
Query: 93 NPSTFAFNTVIRGYAEAG-LGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---K 148
+ ++ +I YA++G I+L+ +MI + P+ F++ +LKACG+L +
Sbjct: 122 EHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 181
Query: 149 GVHSLVVK--SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
V+S VK N V +SL I+ Y G ++ A+ FD + EKN+V++ A+++G+
Sbjct: 182 QVYSYAVKLGIASVNCVGNSL---ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 238
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
K E LF ++ D+G+ ++ T S+LS A++GA G+ +H + K N
Sbjct: 239 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 298
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+ AL MY++CG IE A +VF + ++NV +W S+I G A HG A++MF +M +G
Sbjct: 299 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 358
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
KP+++T +AVL+ACSH G+I +G++ F +M +++ + P ++HY C+VDLL R+ LL EA
Sbjct: 359 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 418
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
E I +MP+ +A++W +LL AC N EL A E +++ EP + Y+L+SN++
Sbjct: 419 MEFINSMPLMADALVWRTLLGACRVH---GNTELGRHAAEMILEQEPDDPAAYILLSNLH 475
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
A+ QW D K+R+ MKERN++K GCS IE+ + VH F VG+ HP + +IY L+ +A
Sbjct: 476 ASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLA 535
Query: 507 ISLREECY 514
++E Y
Sbjct: 536 SKIKEMGY 543
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 173/337 (51%), Gaps = 12/337 (3%)
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
A A+ VF+++ + + +I +A+ G I L+ M +G PD FTY +L AC
Sbjct: 7 APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 66
Query: 142 GDLRQV---KGVHSLVVK---SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
+L + K +HS V++ + D V SL + G V ++ +F+QM E NV
Sbjct: 67 TELGLLALGKQLHSRVIRLGLALDV-CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 125
Query: 196 VTWTAMINGHVKQKNY-REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
++WTA+I + + +E I+LF KM + N + SVL AC NL G+ V+
Sbjct: 126 MSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 185
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+ K I + +G +L MYA+ G +E+A + F I+ EKN+ ++N+I+ G A + EE
Sbjct: 186 YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEE 245
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCL 373
A +F ++ +GI T ++L+ + G + KG++I ++ YK + + L
Sbjct: 246 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN--AL 303
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ + R ++ A++V M + N + W S++T A
Sbjct: 304 ISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFA 339
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 180/510 (35%), Positives = 276/510 (54%), Gaps = 38/510 (7%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQI 91
+L C+HL + K++HA +++ +N I ++ + + L++ N Q+ VF+ I
Sbjct: 303 VLPACSHLERLDVGKEIHAYVLR---NNDLIENSFVGSALVDMYCNCRQVESGRRVFDHI 359
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKAC---GDLRQV 147
+ +N +I GYA GL + + L+ +MI GL P++ T ++ AC
Sbjct: 360 LGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNK 419
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ +H VK F + L+ Y G + ++ +FD M ++ V+W MI G+V
Sbjct: 420 ESIHGYAVK-LGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVL 478
Query: 208 QKNYREGIDLFRKMR-----------------DSGVEVNELTLVSVLSACANLGASELGK 250
Y + L +M+ + N +TL++VL CA L A GK
Sbjct: 479 SGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGK 538
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
+H + +N + + +G+AL DMYAKCG + + RVF + KNV TWN +I +HG
Sbjct: 539 EIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHG 598
Query: 311 CGEEAVKMFWQMQMSG-----IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
GEEA+++F M KP++VT I V ACSH+GLI +G +FY M+ D+ VEP
Sbjct: 599 KGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEP 658
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV-LWGSLLTACASADDGANVELAEIA 424
HY C+VDLL RA L+EAYE++ MP E + V W SLL AC NVEL E+A
Sbjct: 659 TSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQ---NVELGEVA 715
Query: 425 MERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHE 484
+ L+ LEP +YVL+SNIY++ W+ A ++R+ M++ + K PGCS IE D VH+
Sbjct: 716 AKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHK 775
Query: 485 FMVGDGRHPCSEEIYSMLEYVAISLREECY 514
FM GD HP SE+++ LE ++ +R+E Y
Sbjct: 776 FMAGDVSHPQSEQLHGFLETLSEKMRKEGY 805
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 186/371 (50%), Gaps = 16/371 (4%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+Q+HA +K + + ++ T L+ I VF++I + ++N+ I
Sbjct: 112 EQIHAAAVKFGYGSSSV--TVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAAL 169
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD------LRQVKGVHSLVVKSKDF 160
+ ++ + M ++ SFT + AC + LR K +H ++ D
Sbjct: 170 CRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQ 229
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
+ ++ L+ Y G V ++ LF+ ++++V+W MI+ + + E + FR
Sbjct: 230 KTFTNNA--LMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRL 287
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV-NKNCIILNDKLGAALTDMYAKCG 279
M GVE++ +T+ SVL AC++L ++GK +H +V N +I N +G+AL DMY C
Sbjct: 288 MVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCR 347
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIKPDDVTLIAVL 338
+E RVF +L + + WN++I G A +G E+A+ +F +M +++G+ P+ T+ +V+
Sbjct: 348 QVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVM 407
Query: 339 TACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
AC H + I Y ++ +K + V++ L+D+ R +D + + +M +
Sbjct: 408 PACVHCEAFSNKESIHGYAVKLGFKEDRYVQN--ALMDMYSRMGKMDISETIFDSMEVR- 464
Query: 398 NAVLWGSLLTA 408
+ V W +++T
Sbjct: 465 DRVSWNTMITG 475
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 164/325 (50%), Gaps = 14/325 (4%)
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVH 151
ST ++ +R + I Y +M +G PD+F +P +LKA DL+ + +H
Sbjct: 56 STASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIH 115
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
+ VK +S + L+ Y G + +FD++T+++ V+W + I + + +
Sbjct: 116 AAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKW 175
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS---ELGKWVHEF---VNKNCIILND 265
+ ++ FR M+ +E++ TLVSV AC+NLG LGK +H + V N+
Sbjct: 176 EQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFTNN 235
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
AL MYAK G ++++ +F+ +++++ +WN++I + EA+ F M +
Sbjct: 236 ----ALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G++ D VT+ +VL ACSH ++ GKEI + R+ + N LVD+ C R ++
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACA 410
V ++ + LW ++++ A
Sbjct: 352 GRRVFDHI-LGRRIELWNAMISGYA 375
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 120/251 (47%), Gaps = 25/251 (9%)
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
++ +W + + ++RE I + +M SG + +VL A + L + G+ +
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 253 HE------FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
H + + + + N L +MY KCG I + +VF + +++ +WNS I L
Sbjct: 115 HAAAVKFGYGSSSVTVAN-----TLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAAL 169
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK---GKEIF-YNMR-RDY 361
E+A++ F MQM ++ TL++V ACS+ G++ GK++ Y++R D
Sbjct: 170 CRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQ 229
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
K N L+ + + +D++ + + ++ + V W +++++ + +D +
Sbjct: 230 KTFTN----NALMAMYAKLGRVDDSKALFESF-VDRDMVSWNTMISSFSQSDRFSEA--- 281
Query: 422 EIAMERLIKLE 432
+A RL+ LE
Sbjct: 282 -LAFFRLMVLE 291
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 175/509 (34%), Positives = 272/509 (53%), Gaps = 47/509 (9%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
+ K+VH I+ +SD L LI + + A VF+ ++ ++ ++
Sbjct: 150 RVKEVHDDAIRCGM----MSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMS 205
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDF 160
Y GL G+ ++ +M NG+ P+S T +L AC +L+ +K +H V+
Sbjct: 206 SCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMI 265
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF-- 218
+V + L++ Y VK A+L+FD M ++VV+W ++ + + Y +G+ LF
Sbjct: 266 ENVF-VCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQ 324
Query: 219 ---------------------------------RKMRDSGVEVNELTLVSVLSACANLGA 245
RKM++ G + N++T+ S L AC+ L +
Sbjct: 325 MSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILES 384
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
+GK VH +V ++ +I + AL MYAKCG + + VF ++ K+V WN++I
Sbjct: 385 LRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIA 444
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
A+HG G E + +F M SGIKP+ VT VL+ CSH+ L+E+G +IF +M RD+ VEP
Sbjct: 445 NAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEP 504
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAM 425
+ HY C+VD+ RA L EAYE I+ MPMEP A WG+LL AC NVELA+I+
Sbjct: 505 DANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYK---NVELAKISA 561
Query: 426 ERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEF 485
+L ++EP N GNYV + NI W +A + R LMKER I K PGCS +++ D VH F
Sbjct: 562 NKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTF 621
Query: 486 MVGDGRHPCSEEIYSMLEYVAISLREECY 514
+VGD + S++IY+ L+ + ++ Y
Sbjct: 622 VVGDKNNMESDKIYNFLDELGEKMKSAGY 650
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 204/435 (46%), Gaps = 58/435 (13%)
Query: 34 LPLLQKCTHLVQ----FKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
LP TH Q +KQ+ + + S S L +L+++ +N A +F+
Sbjct: 32 LPPFFSITHSTQSSSIWKQLTSTKVAPSVPTNIPSHLGL-RLLKAALNVGDFRRAQQLFD 90
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQ 146
I P +T+I + GL + I+LY + G+ P + + + KACG D +
Sbjct: 91 NIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASR 150
Query: 147 VKGVHSLVVK----SKDF--NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
VK VH ++ S F N++IH+ Y V+ A+ +FD + K+VV+WT+
Sbjct: 151 VKEVHDDAIRCGMMSDAFLGNALIHA-------YGKCKCVEGARRVFDDLVVKDVVSWTS 203
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
M + +V R G+ +F +M +GV+ N +TL S+L AC+ L + G+ +H F ++
Sbjct: 204 MSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHG 263
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV------------------------ 296
+I N + +AL +YA+C +++A VF ++ ++V
Sbjct: 264 MIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFS 323
Query: 297 -----------CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
TWN++IGG +G E+AV+M +MQ G KP+ +T+ + L ACS
Sbjct: 324 QMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILE 383
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
+ GKE+ + R + + ++ LV + + L+ + V +M + V W ++
Sbjct: 384 SLRMGKEVHCYVFRHWLIG-DLTTMTALVYMYAKCGDLNLSRNVF-DMICRKDVVAWNTM 441
Query: 406 LTACASADDGANVEL 420
+ A A +G V L
Sbjct: 442 IIANAMHGNGREVLL 456
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISD-TQLAKLIESLVNSSQIAYAHLVFNQII 92
LP L K+VH + F + I D T + L+ + + VF+ I
Sbjct: 376 LPACSILESLRMGKEVHCYV----FRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMIC 431
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK 148
A+NT+I A G G + L+ M+ +G+ P+S T+ +L C R V+
Sbjct: 432 RKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVE 487
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/488 (34%), Positives = 280/488 (57%), Gaps = 15/488 (3%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L CT L KQ+H+++I+ L + + + VF Q+
Sbjct: 57 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 116
Query: 93 NPSTFAFNTVIRGYAEAG-LGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---K 148
+ ++ +I YA++G I+L+ +MI + P+ F++ +LKACG+L +
Sbjct: 117 EHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 176
Query: 149 GVHSLVVK--SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
V+S VK N V +SL I+ Y G ++ A+ FD + EKN+V++ A+++G+
Sbjct: 177 QVYSYAVKLGIASVNCVGNSL---ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 233
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
K E LF ++ D+G+ ++ T S+LS A++GA G+ +H + K N
Sbjct: 234 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 293
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+ AL MY++CG IE A +VF + ++NV +W S+I G A HG A++MF +M +G
Sbjct: 294 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 353
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
KP+++T +AVL+ACSH G+I +G++ F +M +++ + P ++HY C+VDLL R+ LL EA
Sbjct: 354 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 413
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
E I +MP+ +A++W +LL AC N EL A E +++ EP + Y+L+SN++
Sbjct: 414 MEFINSMPLMADALVWRTLLGACRVH---GNTELGRHAAEMILEQEPDDPAAYILLSNLH 470
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
A+ QW D K+R+ MKERN++K GCS IE+ + VH F VG+ HP + +IY L+ +A
Sbjct: 471 ASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLA 530
Query: 507 ISLREECY 514
++E Y
Sbjct: 531 SKIKEMGY 538
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 173/337 (51%), Gaps = 12/337 (3%)
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
A A+ VF+++ + + +I +A+ G I L+ M +G PD FTY +L AC
Sbjct: 2 APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 61
Query: 142 GDLRQV---KGVHSLVVK---SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
+L + K +HS V++ + D V SL + G V ++ +F+QM E NV
Sbjct: 62 TELGLLALGKQLHSRVIRLGLALDV-CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 120
Query: 196 VTWTAMINGHVKQKNY-REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
++WTA+I + + +E I+LF KM + N + SVL AC NL G+ V+
Sbjct: 121 MSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 180
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+ K I + +G +L MYA+ G +E+A + F I+ EKN+ ++N+I+ G A + EE
Sbjct: 181 YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEE 240
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCL 373
A +F ++ +GI T ++L+ + G + KG++I ++ YK + + L
Sbjct: 241 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN--AL 298
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ + R ++ A++V M + N + W S++T A
Sbjct: 299 ISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFA 334
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 178/488 (36%), Positives = 292/488 (59%), Gaps = 14/488 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LLQKC+ Q KQ+ A +I + + S T+L +L ++ + ++YA +F I PS
Sbjct: 7 LLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELC-AISSFGDLSYALHIFRYIPYPS 65
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDP-DSFTYPILLKACGDL---RQVKGV 150
T +N VIRG A + + Y M NGL D+ T LKAC + +
Sbjct: 66 TNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARSEAIQL 125
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
HS +++ FN+ + T L+ Y GD+ AQ LFD+M + ++ +W A+I G +
Sbjct: 126 HSQLLRF-GFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSR 184
Query: 211 YREGIDLFRKMR-DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ I F++M+ D + N +T+ L AC+ LGA + G+ VH+++ + + N ++
Sbjct: 185 PADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDSNVQVCN 244
Query: 270 ALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+ DMYAKCG +++A VF+ + +K++ TWN++I A+HG G +A+ +F ++ SG+
Sbjct: 245 VVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMS 304
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD V+ +AVL AC+HAGL+E G ++F +M + +EPN+KHYG +VDLL RA L EAY+
Sbjct: 305 PDAVSYLAVLCACNHAGLVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYD 363
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
++ ++P PN VLW +LL AC + D VE+AE+A +L+++ + G +VL+SN+YAA
Sbjct: 364 IVSSLPF-PNMVLWQTLLGACRTYGD---VEMAELASRKLVEMGFISCGXFVLLSNVYAA 419
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
+ +WDD G++R M+ R++ K PG S IEI +++F+ GD H EIY+ L+ + +
Sbjct: 420 RQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLR 479
Query: 509 LREECYAA 516
++ Y+A
Sbjct: 480 IKAYGYSA 487
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 141/287 (49%), Gaps = 7/287 (2%)
Query: 134 YPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF--YCNFGDVKSAQLLFDQMT 191
+ +LL+ C Q+K + + ++ + DF+ S T+L+ +FGD+ A +F +
Sbjct: 4 FNLLLQKCSSFSQIKQLQANLIINGDFH-FSSSRTKLLELCAISSFGDLSYALHIFRYIP 62
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV--EVNELTLVSVLSACANLGASELG 249
+ W A+I G + + +R M S ++ LT L ACA A
Sbjct: 63 YPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARSEA 122
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
+H + + + L L D YAK G ++ A ++F + + ++ +WN++I G A
Sbjct: 123 IQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQG 182
Query: 310 GCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
+A+ F +M++ G ++P+ VT+ L ACS G +++G+ + + + K++ NV+
Sbjct: 183 SRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEE-KLDSNVQ 241
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
++D+ + +D+AY V NM + + + W +++ A A DG
Sbjct: 242 VCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDG 288
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 275/473 (58%), Gaps = 14/473 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K++H +++ FD+ T L ++ + A +F+ ++ + ++N++I Y
Sbjct: 256 KEIHGYAMRSGFDSLVNISTAL---VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVK-SKDFN- 161
+ + ++ +M+ G+ P + L AC GDL + + +H L V+ D N
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
SV++SL I+ YC +V +A +F ++ + +V+W AMI G + + ++ F +M
Sbjct: 373 SVVNSL---ISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
R V+ + T VSV++A A L + KW+H V ++C+ N + AL DMYAKCG I
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 489
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
A +F ++ E++V TWN++I G HG G+ A+++F +MQ IKP+ VT ++V++AC
Sbjct: 490 MIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 549
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SH+GL+E G + FY M+ +Y +E ++ HYG +VDLL RA L+EA++ I MP++P +
Sbjct: 550 SHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 609
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
+G++L AC NV AE A ERL +L P + G +VL++NIY A + W+ G++R
Sbjct: 610 YGAMLGACQIHK---NVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVS 666
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
M + + K PGCS++EI + VH F G HP S++IY+ LE + ++E Y
Sbjct: 667 MLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGY 719
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 205/396 (51%), Gaps = 15/396 (3%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKN----SNTATKSHHHLP---LLQKCTHLVQFKQVHAQI 53
M QLV S + N + H++ N + + P LL++C+ L + +Q+ +
Sbjct: 1 MSSQLVQFSTVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLV 60
Query: 54 IKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
K T+L L + A VF I + ++T+++G+A+
Sbjct: 61 FKNGLYQEHFFQTKLVSL---FCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLD 117
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRL 170
+ +Q + +M + ++P + + LLK CGD LR K +H L+VKS F+ + ++T L
Sbjct: 118 KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS-GFSLDLFAMTGL 176
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNE 230
Y V A+ +FD+M E+++V+W ++ G+ + R +++ + M + ++ +
Sbjct: 177 ENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSF 236
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI 290
+T+VSVL A + L +GK +H + ++ + AL DMYAKCG +E A ++F
Sbjct: 237 ITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDG 296
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+LE+NV +WNS+I + +EA+ +F +M G+KP DV+++ L AC+ G +E+G
Sbjct: 297 MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
+ I + + + ++ NV L+ + C+ + +D A
Sbjct: 357 RFI-HKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 241/396 (60%), Gaps = 13/396 (3%)
Query: 127 LDPDSFTYPILLKAC---GDLRQVKGVHSLV-VKSKDFNSVIHSLTRLITFYCNFGDVKS 182
L P Y LL++C ++ K +H+ V + F++VI T+L+ YC + S
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVI--ATKLVNLYCVCDSLSS 128
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A+LLFD++ + N+ W +I G+ Y + L+ +M D G+ + T VL ACA
Sbjct: 129 ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAA 188
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN---VCTW 299
L A E G+ +HE V + + +GAAL DMYAKCG + A VF +L ++ V +W
Sbjct: 189 LSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSW 248
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N++I G A+HG EA+ +F +M KPD +T + VL+ACSH GL+E+G F M R
Sbjct: 249 NAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIR 307
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
DYK++P V+HY C+VDLL + LDEAY +I M + P++ +WG+LL +C ANVE
Sbjct: 308 DYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIH---ANVE 364
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN 479
L EIA+ERLI+LEP + GNYV++SNIYA +W+ K+R+LM +R + K+ CS IE+
Sbjct: 365 LGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVK 424
Query: 480 DVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
+ VH F+ GD HP S+EIYS LE V ++E Y+
Sbjct: 425 NKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYS 460
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 171/349 (48%), Gaps = 29/349 (8%)
Query: 8 NSQLTHFTNSANSHKNSNTATKSH-HHLPLLQKC---THLVQFKQVHAQIIKASFDNRTI 63
+ L + +N H S T ++ ++ LLQ C + KQ+HAQ+ A F T+
Sbjct: 52 QTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTV 111
Query: 64 SDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI 123
T+L L ++ A L+F++I + F +N +IRGYA G +QLY QM
Sbjct: 112 IATKLVNL---YCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF 168
Query: 124 GNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
GL PD+FT+P +LKAC L + + +H VV++ + + LI Y G V
Sbjct: 169 DYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQT-GWEKDVFVGAALIDMYAKCGCV 227
Query: 181 KSAQLLFDQMTEKN---VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
SA+ +FD++ ++ VV+W AMI G+ + E +DLF +M + + + +T V VL
Sbjct: 228 GSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEM-NRVAKPDHITFVGVL 286
Query: 238 SACANLGASELGKWVHEFVNKNCII-LNDKLGAALTDMYAKCGYIEEALRV---FKIVLE 293
SAC++ G E G E + ++ I + + D+ G ++EA + K++ +
Sbjct: 287 SACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPD 346
Query: 294 KNVCTWNSIIGGLAIHG---CGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
V W +++ IH GE A++ +++ PDD +L+
Sbjct: 347 SGV--WGALLNSCKIHANVELGEIALERLIELE-----PDDAGNYVILS 388
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/471 (35%), Positives = 266/471 (56%), Gaps = 11/471 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+ +HA + + F D L L +A A VF+ + ++ ++I GY
Sbjct: 84 RAIHAHLAGSQFAGSVFLDNSLIHL---YCKCGAVADARRVFDGMPARDMCSWTSLIAGY 140
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSV 163
A+ + + L M+ P+ FT+ LLKA G + +H+L VK D++
Sbjct: 141 AQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVK-YDWHDD 199
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
++ + L+ Y G + A +FDQ+ KN V+W A+I G ++ + + +F +M+
Sbjct: 200 VYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQR 259
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
+G E T SV SA A +GA E GKWVH + K+ L+ +G + DMYAK G + +
Sbjct: 260 NGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMID 319
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A +VF V +K+V TWNS++ A +G G EAV F +M+ G+ + +T +++LTACSH
Sbjct: 320 ARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSH 379
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
GL+++GK+ +++M ++Y +EP + HY +VDLL RA LL++A I MPM+P A +WG
Sbjct: 380 GGLVKEGKQ-YFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWG 438
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL +C N ++ + A + + +L+P + G VL+ NIYA+ QWD A ++R++MK
Sbjct: 439 ALLGSCRMHK---NAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMK 495
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ K P CS +EI + VH F+ D HP SEEIY E ++I +R+ Y
Sbjct: 496 ATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGY 546
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 169/502 (33%), Positives = 277/502 (55%), Gaps = 11/502 (2%)
Query: 16 NSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL 75
+S ++ + + T H + + L + +HA + + F D L L
Sbjct: 53 DSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHL---Y 109
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYP 135
+A A VF+ + ++ ++I GYA+ + + L M+ P+ FT+
Sbjct: 110 CKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFA 169
Query: 136 ILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
LLKA G + +H+L VK D++ ++ + L+ Y G + A +FDQ+
Sbjct: 170 SLLKAAGASASSGIGEQIHALTVK-YDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLES 228
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
KN V+W A+I G ++ + + +F +M+ +G E T SV SA A +GA E GKWV
Sbjct: 229 KNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWV 288
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG 312
H + K+ L+ +G + DMYAK G + +A +VF V +K+V TWNS++ A +G G
Sbjct: 289 HAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLG 348
Query: 313 EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC 372
EAV F +M+ G+ + +T +++LTACSH GL+++GK+ +++M ++Y +EP + HY
Sbjct: 349 REAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQ-YFDMMKEYNLEPEIDHYVT 407
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLE 432
+VDLL RA LL++A I MPM+P A +WG+LL +C N ++ + A + + +L+
Sbjct: 408 VVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHK---NAKIGQFAADHVFELD 464
Query: 433 PFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRH 492
P + G VL+ NIYA+ QWD A ++R++MK + K P CS +EI + VH F+ D H
Sbjct: 465 PDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTH 524
Query: 493 PCSEEIYSMLEYVAISLREECY 514
P SEEIY E ++I +R+ Y
Sbjct: 525 PRSEEIYKKWEEISIQIRKAGY 546
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 176/460 (38%), Positives = 259/460 (56%), Gaps = 10/460 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFA--FNTVIRG 105
Q+H +IK + T L I S IA A VF++ + A +N +I G
Sbjct: 77 QLHGHVIKTGCEPEPFVQTSL---ISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAG 133
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDF--NSV 163
Y+ + L+ QM G+ ++ T L+ C + SL S F +
Sbjct: 134 YSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGD 193
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ L+T Y G V A+ LFD M EK ++TW AMI+G+ + +DL+RKM
Sbjct: 194 LSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEF 253
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
+G+ + +TLV VLS+CA+LGA G+ V + + + N L AL +MYA+CG + +
Sbjct: 254 TGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVK 313
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A +F + EKNV +W +II G +HG GE AV++F +M S PD ++VL+ACSH
Sbjct: 314 ARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSH 373
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
AGL EKG F M RDY ++P +HY C+VDLL RA L+EA ++I +M +EP+ +WG
Sbjct: 374 AGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWG 433
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL AC NVELAE+A E++I+ EP N G YVL+SNI++ + ++R +M+
Sbjct: 434 ALLGACKIHR---NVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMR 490
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
ER + K PGCS +E +H F+ GD HP ++EIY ML+
Sbjct: 491 ERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLD 530
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 184/385 (47%), Gaps = 15/385 (3%)
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR-QVKG--VH 151
+T ++N +R A + LY QM+ +G P++FT+P K+C L + G +H
Sbjct: 20 TTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLH 79
Query: 152 SLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ--MTEKNVVTWTAMINGHVKQ 208
V+K+ + + T LI+ YC + SA+ +FD+ + V + A+I G+
Sbjct: 80 GHVIKTGCEPEPFVQ--TSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ + + LFR+MR GV VN +T++ ++ CA G +H + + + +G
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
L MY +CG ++ A ++F + EK + TWN++I G A +G + ++ +M+ +GI
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIV 257
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMR-RDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
PD VTL+ VL++C+H G G+E+ + + P +K+ L+++ R L +A
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNLVKAR 315
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
+ M E N + W +++ G ELA + +I + DG +
Sbjct: 316 AIFDGM-TEKNVISWTAIIAGYGMHGQG---ELAVQLFDEMISSDELPDGAAFVSVLSAC 371
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPG 472
+ A + G ER+ PG
Sbjct: 372 SHAGLTEKGLYYFTAMERDYGLQPG 396
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 16/227 (7%)
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+ +W A + +Q++++E ++L+ +M SG N T +CA+L G
Sbjct: 18 QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN-------VCTWNSIIG 304
+H V K + +L MY KC I A +VF ++N VC +N++I
Sbjct: 78 LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVF----DENHHSRNLAVC-YNALIA 132
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG-KEIFYNMRRDYKV 363
G +++ +AV +F QM+ G+ + VT++ ++ C AG I G + + +
Sbjct: 133 GYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVC--AGPIHLGFGTSLHACSVRFGL 190
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ ++ CL+ + R +D A ++ MP E + W ++++ A
Sbjct: 191 DGDLSVGNCLLTMYVRCGSVDFARKLFDGMP-EKGLITWNAMISGYA 236
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 163/477 (34%), Positives = 282/477 (59%), Gaps = 10/477 (2%)
Query: 47 KQVHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
+Q+H+Q I+ +R + + + V+ S A A +F+QI++ + F++ +I G
Sbjct: 291 QQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCA-ARKIFDQILDHNVFSWTAMITG 349
Query: 106 YAE-AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFN 161
Y + G + L+ MI + P+ FT+ LKAC +L ++ V + VK F+
Sbjct: 350 YVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVK-LGFS 408
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
SV LI+ Y G + A+ FD + EKN++++ +I+ + K N E ++LF ++
Sbjct: 409 SVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEI 468
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
D G+ + T S+LS A++G G+ +H V K+ + LN + AL MY++CG I
Sbjct: 469 EDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNI 528
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
E A +VF+ + ++NV +W SII G A HG +A+++F +M G++P+ VT IAVL+AC
Sbjct: 529 ESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSAC 588
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SH GL+ +G + F +M ++ V P ++HY C+VD+L R+ L EA + I +MP + +A++
Sbjct: 589 SHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALV 648
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
W + L AC N+EL + A + +I+ EP + Y+L+SN+YA+ ++WD+ +R+
Sbjct: 649 WRTFLGACRVH---GNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKA 705
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
MKE+N++K GCS +E+ + VH+F VGD HP + EIY L+ +++ +++ Y +
Sbjct: 706 MKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNL 762
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 189/392 (48%), Gaps = 27/392 (6%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
L+KC F VH ++ ++ +++ L LI Q A +F Q++
Sbjct: 72 FLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT---LNSLISLYSKCGQWEKATSIF-QLM 127
Query: 93 NPST--FAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK-- 148
S +++ ++ +A +G R + + MI NG P+ + + +AC V
Sbjct: 128 GSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVG 187
Query: 149 -GVHSLVVKSKDFNSVIHSLTRLITFYC-NFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+ VVK+ S + LI + GD+ SA +F++M E+N VTWT MI +
Sbjct: 188 DSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLM 247
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ E IDLF +M SG E + TL V+SACAN+ LG+ +H ++ + L+
Sbjct: 248 QFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRC 307
Query: 267 LGAALTDMYAKC---GYIEEALRVFKIVLEKNVCTWNSIIGG-LAIHGCGEEAVKMFWQM 322
+G L +MYAKC G + A ++F +L+ NV +W ++I G + G EEA+ +F M
Sbjct: 308 VGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGM 367
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC----LVDLLC 378
++ + P+ T + L AC++ + G+++F + V+ C L+ +
Sbjct: 368 ILTHVIPNHFTFSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCVANSLISMYA 422
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
R+ +D+A + ++ E N + + +++ A A
Sbjct: 423 RSGRIDDARKAF-DILFEKNLISYNTVIDAYA 453
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 182/407 (44%), Gaps = 56/407 (13%)
Query: 110 GLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK-DFNSVIH 165
G H+ I M+ G PD TY + LK C R VH + +S +SV
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSV-- 102
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQM-TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
+L LI+ Y G + A +F M + +++++W+AM++ + F M ++
Sbjct: 103 TLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN 162
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK-LGAALTDMYAKC-GYIE 282
G NE + AC+ +G + FV K + +D +G L DM+ K G +
Sbjct: 163 GYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLV 222
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A +VF+ + E+N TW +I L G EA+ +F +M +SG +PD TL V++AC+
Sbjct: 223 SAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACA 282
Query: 343 HAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCLVDL---------LCRAR-----LLD--- 384
+ L+ G+++ +R ++ V CL+++ +C AR +LD
Sbjct: 283 NMELLLLGQQLHSQAIRHGLTLDRCVG--CCLINMYAKCSVDGSMCAARKIFDQILDHNV 340
Query: 385 ------------------EAYEVIRNMPME---PNAVLWGSLLTACASADDGANVELAEI 423
EA ++ R M + PN + S L ACA+ A + + E
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANL---AALRIGEQ 397
Query: 424 AMERLIKLEPFNDGNYVLMS--NIYAAKAQWDDAGKMRRLMKERNIV 468
+KL F+ N V S ++YA + DDA K ++ E+N++
Sbjct: 398 VFTHAVKL-GFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLI 443
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
L F T N +T + + + I M G + T L C
Sbjct: 23 LQFPTFTNPNPLT--GRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTR 80
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSII 303
+ ++G VHE + ++ + L+ +L +Y+KCG E+A +F+++ +++ +W++++
Sbjct: 81 SFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMV 140
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
A + G A+ F M +G P++ A ACS A + G IF + + +
Sbjct: 141 SCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYL 200
Query: 364 EPNVKHYGC-LVDLLCRARL-LDEAYEVIRNMPMEPNAVLWGSLLT 407
+ +V GC L+D+ + R L A++V MP E NAV W ++T
Sbjct: 201 QSDVC-VGCGLIDMFVKGRGDLVSAFKVFEKMP-ERNAVTWTLMIT 244
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 262/457 (57%), Gaps = 12/457 (2%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
L + KQ+H ++K F + L+ L+ +I VF+++ + ++N++
Sbjct: 130 LQEGKQIHGLVLKIGFG---VDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSL 186
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNS 162
I GYA G I+L +M + DSF++ IL+ +++ + + NS
Sbjct: 187 IDGYARCG----EIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNS 242
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
V S +I Y GD +A+ LFDQM E+++VTW +MI G+ + K + + + LF M
Sbjct: 243 V--SWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVML 300
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ N T++ +SA + + + G+WVH ++ K+ + LG L +MY+KCG ++
Sbjct: 301 REDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVK 360
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
ALRVF+ + +K + W S+I GL +HG E+ +++F +M +G+KP +T I VL ACS
Sbjct: 361 SALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACS 420
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
HAG E F M DY ++P+++HYGCL+D+LCRA L+EA + I MP++ N V+W
Sbjct: 421 HAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIW 480
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
SLL+ + N+ + E A + LI L P G YV++SN+YAA W+ ++R +M
Sbjct: 481 TSLLSG---SRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMM 537
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
K++ + K+PGCS IE +HEF+VGD HP +EEIY
Sbjct: 538 KKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIY 574
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 188/371 (50%), Gaps = 28/371 (7%)
Query: 33 HLPLLQKCTHLVQFKQVHAQIIK-ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
H PL Q C + Q+HA IK AS ++ ++S LA + +N+ Q YAH +F+ I
Sbjct: 19 HFPL-QNCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQ--YAHSLFDWI 75
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVK 148
P+ ++N +I+ Y E + I L+ +++ + + PDSFT P +LK C G L++ K
Sbjct: 76 QEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCARLGALQEGK 134
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
+H LV+K F L+ L++ Y G+++ + +FD+M +K+VV+W ++I+G+ +
Sbjct: 135 QIHGLVLKI-GFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARC 193
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN-KNCIILNDKL 267
+++F +M E + + ++ + G E + V + + +N + N
Sbjct: 194 GEIELALEMFEEMP----EKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWN--- 246
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
A+ + Y K G A +F + E+++ TWNS+I G + +A+K+F M I
Sbjct: 247 --AMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDI 304
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC----LVDLLCRARLL 383
P+ T++ ++A S G++ G + + Y V+ K G L+++ + +
Sbjct: 305 SPNYTTILGAVSAAS--GMVSLGTGRWVH---SYIVKSGFKTDGVLGTLLIEMYSKCGSV 359
Query: 384 DEAYEVIRNMP 394
A V R++P
Sbjct: 360 KSALRVFRSIP 370
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 143/282 (50%), Gaps = 16/282 (5%)
Query: 129 PDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN--FGDVKSAQLL 186
P + +P L+ CG R+ +H+L +K+ N S +RL+ Y + +++ A L
Sbjct: 15 PPNLHFP--LQNCGTEREANQLHALSIKTASLNHPSVS-SRLLALYADPRINNLQYAHSL 71
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD + E +V+W +I +++ + + I LF K+ V + TL VL CA LGA
Sbjct: 72 FDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFVP-DSFTLPCVLKGCARLGAL 130
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
+ GK +H V K ++ + ++L MY+KCG IE +VF + +K+V +WNS+I G
Sbjct: 131 QEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGY 190
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
A G E A++MF +M + D + ++ S +G +E +++F M V N
Sbjct: 191 ARCGEIELALEMFEEMP----EKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWN 246
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+++ +A + A E+ MP E + V W S++T
Sbjct: 247 A-----MINGYMKAGDSNTAKELFDQMP-ERSLVTWNSMITG 282
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 282/540 (52%), Gaps = 78/540 (14%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+QVH + FD+ + + L+ + +QI AH VF+++ P +++ ++ Y
Sbjct: 134 RQVHGIASVSGFDSDSFVQS---SLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAY 190
Query: 107 AEAG-----------LGHRGIQ------------------------LYTQMIGNGLDPDS 131
A G +G G+Q ++ M G +PD
Sbjct: 191 ARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDG 250
Query: 132 FTYPILLKACGDLRQ-VKGV--HSLVVK----------------------SKDFNSVIHS 166
T +L A GDL V G+ H V+K + + + V
Sbjct: 251 TTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQ 310
Query: 167 LTRLITFYCNF--------GDVKSAQLLF----DQMTEKNVVTWTAMINGHVKQKNYREG 214
+ + CN G V+S+ LF DQ E NVV+WT+MI + E
Sbjct: 311 MDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEA 370
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
++LFR+M+ +GV+ N +T+ +L AC N+ A GK H F + I + +G+AL DM
Sbjct: 371 LELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDM 430
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
YAKCG I+ + F + KN+ WN++I G A+HG +EA+++F MQ SG KPD ++
Sbjct: 431 YAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISF 490
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
VL+ACS +GL E+G F +M Y +E V+HY C+V LL RA L++AY +IR MP
Sbjct: 491 TCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMP 550
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
+ P+A +WG+LL++C + NV L E+A E+L +LEP N GNY+L+SNIYA+K W++
Sbjct: 551 VNPDACVWGALLSSCRVHN---NVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNE 607
Query: 455 AGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
++R +MK + + KNPGCS IE+ + VH + GD HP +I L+ +++ +++ Y
Sbjct: 608 VNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGY 667
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 204/446 (45%), Gaps = 89/446 (19%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
L Q +Q HA I+K N DT LA KL+ N+ A A LV + + P+ F+F+T
Sbjct: 29 LSQTRQAHAHILKTGLFN----DTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFST 84
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL------RQVKGVHSLVV 155
+I +++ H + ++QM+ GL PD+ P +KAC L RQV G+ S V
Sbjct: 85 LIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIAS--V 142
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
D +S + S L+ Y ++ A +FD+M E +VV+W+A++ + +Q E
Sbjct: 143 SGFDSDSFVQS--SLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAK 200
Query: 216 DLFRKMRDSGVEVNEL-----------------------------------TLVSVLSAC 240
LF +M DSGV+ N + T+ SVL A
Sbjct: 201 RLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAV 260
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC---------------------- 278
+L +G +H +V K ++ + + +AL DMY KC
Sbjct: 261 GDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCN 320
Query: 279 ---------GYIEEALRVFKIV----LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
G +E +LR+F+ + +E NV +W S+I + +G EA+++F +MQ++
Sbjct: 321 AFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIA 380
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
G+KP+ VT+ +L AC + + GK +++RR + +V L+D+ + +
Sbjct: 381 GVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRG--ISTDVYVGSALIDMYAKCGRIQ 438
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTACA 410
+ +P + N V W +++ A
Sbjct: 439 ASRICFDGIPTK-NLVCWNAVIAGYA 463
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 161/480 (33%), Positives = 280/480 (58%), Gaps = 13/480 (2%)
Query: 37 LQKCTHLVQFKQVHAQIIKA-SFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
+ CT + +HA++IK+ ++ + I D +L+ A +F+++ N
Sbjct: 72 ISSCTSVSYCSAIHARVIKSLNYSDGFIGD----RLVSMYFKLGYDEDAQRLFDEMPNKD 127
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDPDSFTYPILLKACGD---LRQVKGVH 151
++N+++ G + G + + +M +G P+ T ++ AC D L + K +H
Sbjct: 128 LVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLH 187
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
+VVK + + LI Y G + +A LF++M +++V+W +M+ H
Sbjct: 188 GVVVK-LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYA 246
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
+G+DLF M+ +G+ ++ T+V++L AC + G + +H ++++ + + AL
Sbjct: 247 EKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATAL 306
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
++YAK G + + +F+ + +++ W +++ G A+H CG EA+K+F M G++ D
Sbjct: 307 LNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDH 366
Query: 332 VTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIR 391
VT +L+ACSH+GL+E+GK+ F M Y+VEP + HY C+VDLL R+ L++AYE+I+
Sbjct: 367 VTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIK 426
Query: 392 NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
+MPMEP++ +WG+LL AC NVEL + E+L+ L+P + NY+++SNIY+A
Sbjct: 427 SMPMEPSSGVWGALLGACRVY---GNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGL 483
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
W DA K+R LMKER + +NPGCS IE + +H F+VGD HP S+EI++ LE + +RE
Sbjct: 484 WRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIRE 543
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 163/459 (35%), Positives = 264/459 (57%), Gaps = 15/459 (3%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
Q HA KA F R L + Q A VF+++ ++ ++ +
Sbjct: 139 QAHAVAEKAGFLGRVPVQNALVTFYGA---CGQCGDARKVFDEMAERDVVSWTALLSAFT 195
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVVK-SKDFNSV 163
G+ + + +M + P+ T +L ACG+L R K VH + K+ N +
Sbjct: 196 RGGMFMEALGVLAEM---DVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLI 252
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ + L+ Y + A+ +FD + +++V+WT MI+G V+ K E +++F M+
Sbjct: 253 VGN--ALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQI 310
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
SGV+ +++ L +VLSACA+LGA E G+WVHE++ + I + +G ++ DMY KCG ++
Sbjct: 311 SGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDT 370
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A+ +F+ + KNV +WN++I G A+HG G EA+ F +M SG+ P++VT I VL AC H
Sbjct: 371 AVSIFQEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCH 430
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
+GL+++G+++F M + YK+ P HYGC+VDLL RA L+ EAY+VI+ MPM P W
Sbjct: 431 SGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWV 490
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL+AC + ++ ++ + + +LE +G YVL+SN+YA +W D GK R M
Sbjct: 491 TLLSACQAH---GRMDFSQQILMHIHELESSGNGIYVLLSNMYAVSDRWADVGKARGFMN 547
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
E+ + K PG SVIE+N EF+VG H +++ +ML
Sbjct: 548 EKGMQKEPGSSVIEVNGKTCEFLVGQQNHLYMDDVRAML 586
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 168/321 (52%), Gaps = 15/321 (4%)
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMI-----GNGLDPDSFTYPILLKAC----GDLRQVKG 149
FN +I AG + + ++ G G PD +T P LKAC G LR+
Sbjct: 80 FNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGLREGCQ 139
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
H+ V + F + L+TFY G A+ +FD+M E++VV+WTA+++ +
Sbjct: 140 AHA-VAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGG 198
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ E + + +M V NE+TL SVL AC NLG + GK VH + + LN +G
Sbjct: 199 MFMEALGVLAEMD---VTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVGN 255
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMY KC ++ A RVF ++L +++ +W +I GL EA+++F MQ+SG+KP
Sbjct: 256 ALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKP 315
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D V L VL+AC+ G +E G+ + + R +E +V +VD+ + LD A +
Sbjct: 316 DKVVLSTVLSACASLGALESGRWVHEYIERK-GIEWDVHVGTSVVDMYVKCGCLDTAVSI 374
Query: 390 IRNMPMEPNAVLWGSLLTACA 410
+ MP++ N W +L+ A
Sbjct: 375 FQEMPLK-NVSSWNALINGFA 394
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 275/494 (55%), Gaps = 44/494 (8%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLV----NS 78
+S S L LL KC + Q KQ+ + + T+ D A I S N
Sbjct: 3 SSTYVKASKKTLFLLDKCRTISQIKQIQTHLTVSG----TLKDPYAAAKIISFCALSSNQ 58
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
+++A+ +F + + STF +NTVIR +AE + I L+ M+ + P+++TY L
Sbjct: 59 FSLSHAYRLFLGLRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLF 118
Query: 139 KACGDLRQVK---GVHSLVVKSK----DF--NSVIH------------------------ 165
KAC DL + H +K DF N ++H
Sbjct: 119 KACTDLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVI 178
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
+ T LI Y G V + LFD+M E+N V+W+AMI G+V+ + E ++LF M SG
Sbjct: 179 TWTALINGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISG 238
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
N +V ++ACA+LGA + G+W+H ++ +N + L+ +GAAL DMYAKCG IE A
Sbjct: 239 FWPNHAGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIAC 298
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
+F + ++V + +I GLA HG AV++F +M G+ P++VT ++VL ACS G
Sbjct: 299 SIFGELRNRDVHVYTCLISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRMG 358
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
L++KG IF NM + Y EP V+HYGCLVDLL RA L+EA ++++ MPM+P++ + G+L
Sbjct: 359 LVDKGLRIFENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGAL 418
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L A D VEL E +E L +L + G +V++SN+YA+ +WD+ ++RR M ++
Sbjct: 419 LNASRVYGD---VELGEETVESLAQLSLDHSGVHVVLSNMYASANKWDEVARVRRGMGDK 475
Query: 466 NIVKNPGCSVIEIN 479
+ K PGCS+I+++
Sbjct: 476 KVRKVPGCSLIKVD 489
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 170/468 (36%), Positives = 269/468 (57%), Gaps = 11/468 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP L K++H + F + +S+ I + + A VF+ I +
Sbjct: 358 LPACLDKLQLRSLKELHGYSFRHCFQHVELSNA----FILAYAKCGALNSAEKVFHGIGD 413
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGV 150
+ ++N +I G+A+ G + + L QM +G PD FT LL AC L+ + K +
Sbjct: 414 KTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEI 473
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H V+++ + T L++ Y + G SA++LFD+M +KN+V+W AMI+G+ +
Sbjct: 474 HGYVLRN-GLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGL 532
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E + LFRK G++ +E+ +VSV AC+ L A LGK H +V K + +G +
Sbjct: 533 PYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCS 592
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
+ DMYAK G I+E+ +VF + +KNV +WN+II IHG G+EA++++ +M+ G PD
Sbjct: 593 IIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPD 652
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
T I +L AC HAGL+E+G + F M+ +EP ++HY CL+D+L RA LD+A ++
Sbjct: 653 RFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLV 712
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
MP E + +W SLL +C + GA +E+ E ++L++LEP NYVL+SN+YA
Sbjct: 713 NEMPEEADNRIWSSLLRSCRTF--GA-LEIGEKVAKKLLELEPDKAENYVLLSNLYAGLG 769
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
+WD ++R++MKE + K+ GCS IE+ V+ F+VGD P S EI
Sbjct: 770 KWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEI 817
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 139/265 (52%), Gaps = 8/265 (3%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKACG 142
+ LVF+ + + +N ++ GY GL ++++ ++ + PD+FT+P ++KACG
Sbjct: 98 SRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACG 157
Query: 143 ---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
D+R + +H +V+K V L+ Y G V A +FD M E N+V+W
Sbjct: 158 GILDVRLGEVIHGMVIKMGLVLDVFVG-NALVGMYGKCGAVDEAMKVFDFMPETNLVSWN 216
Query: 200 AMINGHVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
+MI + R+ DL +M + G+ + +T+V++L CA G ++G +H K
Sbjct: 217 SMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVK 276
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+ + A+ MY+KCGY+ EA F KNV +WN++I ++ G EA +
Sbjct: 277 LGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNL 336
Query: 319 FWQMQMSG--IKPDDVTLIAVLTAC 341
+MQ+ G +K ++VT++ VL AC
Sbjct: 337 LQEMQIQGEEMKANEVTILNVLPAC 361
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 146/285 (51%), Gaps = 9/285 (3%)
Query: 136 ILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
+LL+ACG D+ + +H V S + + TRLI Y G ++L+FD M
Sbjct: 48 LLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMET 107
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKW 251
KN++ W A+++G+ + Y + + +F + D+ + + T SV+ AC + LG+
Sbjct: 108 KNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEV 167
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+H V K ++L+ +G AL MY KCG ++EA++VF + E N+ +WNS+I + +G
Sbjct: 168 IHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGF 227
Query: 312 GEEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
++ + +M G+ PD VT++ +L C+ G ++ G I + + + V
Sbjct: 228 SRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGI-HGLAVKLGLSEEVMVN 286
Query: 371 GCLVDLLCRARLLDEA-YEVIRNMPMEPNAVLWGSLLTACASADD 414
+V + + L+EA ++N N V W ++++A + D
Sbjct: 287 NAMVYMYSKCGYLNEAQMSFVKN--NNKNVVSWNTMISAFSLEGD 329
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 157/431 (36%), Positives = 253/431 (58%), Gaps = 7/431 (1%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD--- 143
VF ++ ++ +I GY++ G +++++QM G P FT +L AC D
Sbjct: 277 VFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGT 336
Query: 144 LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
L + K H L+VK F ++ + L+ Y G + A+ F+Q +E ++V WTAM+
Sbjct: 337 LMEGKQAHGLMVK-LGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVT 395
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
GHV+ + + + L+ +M GV N LT+ S+L ACA L A E GK +H + K L
Sbjct: 396 GHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGL 455
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+G+AL+ MY+KCG +E+ + VF+ + ++V WNSII G + +G G +A+ +F +M+
Sbjct: 456 GASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMK 515
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
+ G PD VT I VL ACSH GL+++G F +M +DY + P + HY C+VD+L RA +L
Sbjct: 516 LEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGML 575
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
EA + I ++ ++ LW +L AC S D ++ A E+L+ L + Y+L+S
Sbjct: 576 SEAKDFIESITIDHGTCLWRIVLGACRSLRD---FDVGAYAGEKLMDLGTGDSAAYILLS 632
Query: 444 NIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
NIYAA+ +W+D ++R LMK + K+PGCS +E+N VH F+VG+ +HP +E I + L
Sbjct: 633 NIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVVGEQQHPDAEIINTELR 692
Query: 504 YVAISLREECY 514
+ +++E Y
Sbjct: 693 RLGKHMKDEGY 703
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 142/261 (54%), Gaps = 5/261 (1%)
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
VH+L K +S + T L+ YC G + AQL+FD+M +N V+W AM+ G+ +K
Sbjct: 139 VHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARK 198
Query: 210 NYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+E +LFR+M + + NE +VLSA + +G VH V K+ ++ +
Sbjct: 199 CSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVE 258
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+L MYAK G ++ A VF+ E+N TW+++I G + +G E AV+MF QM +G
Sbjct: 259 NSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFP 318
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
P + TL+ VL ACS G + +GK+ M + ++V+ VK LVD+ + + +A
Sbjct: 319 PTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVK--SALVDMYAKCGCIGDAK 376
Query: 388 EVIRNMPMEPNAVLWGSLLTA 408
E N E + VLW +++T
Sbjct: 377 ECF-NQFSELDIVLWTAMVTG 396
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 168/335 (50%), Gaps = 13/335 (3%)
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLK 139
I A LVF+++ + + ++ ++ GYA +L+ QM+G L + F +L
Sbjct: 169 IPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLHKNEFVATAVLS 228
Query: 140 ACG---DLRQVKGVHSLVVKSK--DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
A L VH LVVK F SV +S L+T Y G + +A +F+ E+N
Sbjct: 229 AISVPLGLPMGVQVHGLVVKDGMVGFVSVENS---LVTMYAKAGCMDAAFHVFESSKERN 285
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
+TW+AMI G+ + N + +F +M +G E TLV VL+AC+++G GK H
Sbjct: 286 SITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHG 345
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+ K + + +AL DMYAKCG I +A F E ++ W +++ G +G E+
Sbjct: 346 LMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQ 405
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCL 373
A+ ++ +M G+ P+ +T+ ++L AC+ +E GK++ ++ + + +V L
Sbjct: 406 ALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVG--SAL 463
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+ + L++ V R MP + + W S+++
Sbjct: 464 STMYSKCGNLEDGMVVFRRMPHR-DVIAWNSIISG 497
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 158/469 (33%), Positives = 264/469 (56%), Gaps = 12/469 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESL-VNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
KQ+H+Q+I+ F +D + LI ++ V + A + N++ S A ++ G
Sbjct: 200 KQIHSQLIRIEF----AADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVG 255
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNS 162
Y +A + L+++MI G++ D F + I+LKAC GDL K +HS +K S
Sbjct: 256 YTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIK-LGLES 314
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ T L+ FY ++A+ F+ + E N +W+A+I G+ + + +++F+ +R
Sbjct: 315 EVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIR 374
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
GV +N ++ AC+ + G +H K ++ +A+ MY+KCG ++
Sbjct: 375 SKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVD 434
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A + F + + + W +II A HG EA+++F +MQ SG++P+ VT I +L ACS
Sbjct: 435 YAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACS 494
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
H+GL+++GK+ +M Y V P + HY C++D+ RA LL EA EVIR+MP EP+ + W
Sbjct: 495 HSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSW 554
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
SLL C S N+E+ IA + + +L+P + YV+M N+YA +WD+A + R++M
Sbjct: 555 KSLLGGCWSR---RNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMM 611
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
ERN+ K CS I + VH F+VGD HP +E+IYS L+ + +S ++
Sbjct: 612 AERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVSFKK 660
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 172/376 (45%), Gaps = 12/376 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K H ++ + + N+ I + +++ + A F++I++ ++ T+I Y
Sbjct: 100 KLFHNRLQRMANSNKFIDNC----ILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAY 155
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSV 163
E G + L+ +M+ G+ P+ + L+ + D L K +HS +++ +F +
Sbjct: 156 TEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRI-EFAAD 214
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
I T + Y G + A++ ++MT K+ V T ++ G+ + R+ + LF KM
Sbjct: 215 ISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMIS 274
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
GVE++ +L ACA LG GK +H + K + +G L D Y KC E
Sbjct: 275 EGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEA 334
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A + F+ + E N +W+++I G G + A+++F ++ G+ + + ACS
Sbjct: 335 ARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSA 394
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
+ G +I + + V + ++ + + +D A++ + +P+ V W
Sbjct: 395 VSDLICGAQIHADAIKKGLV-AYLSGESAMITMYSKCGKVDYAHQAFLAID-KPDTVAWT 452
Query: 404 SLLTACASADDGANVE 419
+++ CA A G E
Sbjct: 453 AII--CAHAYHGKASE 466
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 145/327 (44%), Gaps = 40/327 (12%)
Query: 124 GNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
G ++P S+ Y L K CG L + K H+ + + + N I + ++ YC+
Sbjct: 75 GISINPRSYEY--LFKMCGTLGALSDGKLFHNRLQRMANSNKFIDNC--ILQMYCDCKSF 130
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
+A+ FD++ ++++ +W +I+ + ++ E + LF +M D G+ N +++ +
Sbjct: 131 TAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSF 190
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A+ +LGK +H + + + + +++MY KCG+++ A + K+
Sbjct: 191 ADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACT 250
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI------- 353
++ G +A+ +F +M G++ D +L AC+ G + GK+I
Sbjct: 251 GLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKL 310
Query: 354 ---------------------FYNMRRDYKV--EPNVKHYGCLVDLLCRARLLDEAYEV- 389
F R+ ++ EPN + L+ C++ D A EV
Sbjct: 311 GLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVF 370
Query: 390 --IRNMPMEPNAVLWGSLLTACASADD 414
IR+ + N+ ++ ++ AC++ D
Sbjct: 371 KTIRSKGVLLNSFIYNNIFQACSAVSD 397
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 274/513 (53%), Gaps = 41/513 (7%)
Query: 35 PLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINP 94
P T +Q H+Q+I+ + +L + + S YA + +P
Sbjct: 10 PTPVPLTSFAVLRQHHSQLIRLGVASHAAHARRLLSFL-ARDPDSHFPYASRLLAHHPDP 68
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLV 154
FN + +L M+ L PD FT+P +L + L V +H+L+
Sbjct: 69 HPALFNPLFSALPT----RHAARLLALMLSLPLRPDHFTFPQILPSAQPLHLVAQLHALL 124
Query: 155 VK---------------------SKDFNSVIH----------SLTRLITFYCNFGDVKSA 183
+K D S + S T ++ G A
Sbjct: 125 LKLGFHAHTQSLNALLAAYLANARPDLASRVFRGGGGALDVVSWTTMVGGLLKLGLFDDA 184
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
++LFD M E+N+V+W AM++G+VK + + +++F +MR GV+ N + + AC
Sbjct: 185 RVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAVVACTGA 244
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV--LEKNVCTWNS 301
GA G+ VH +V ++ I +++KL A+ DMY KCG +EEA RVF+ + K + TWN
Sbjct: 245 GALARGREVHRWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNC 304
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+IGG A+HG G++A+K+F +M+ G+ PDDVTL+ VLTAC+HAG++ +G+ F + + Y
Sbjct: 305 MIGGFAVHGRGQDALKLFGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRY 364
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
+EP ++HYGC+VDL RA L+EA +VI++MPMEP+ + G+L A D V+L
Sbjct: 365 GIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHGD---VDLG 421
Query: 422 EIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDV 481
E R+I+L+P N G YVL++N+ A +W+D ++RRLM ERN+ K G SVIE+
Sbjct: 422 EAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQGE 481
Query: 482 VHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
V EF G HP +EE+Y+M + +R E Y
Sbjct: 482 VCEFQCGGLCHPRAEEVYAMASDMMRKIRAEGY 514
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 162/474 (34%), Positives = 282/474 (59%), Gaps = 12/474 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+Q H ++K+ D L + V + A VF+++ + ++ +I GY
Sbjct: 165 RQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGY 224
Query: 107 AEAGLGHR-GIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK--DF 160
++G R I+L+ +M+ + P+ FT+ +LKAC +L + + V++LVVK +
Sbjct: 225 VQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASI 284
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
N V +SL I+ Y G++++A+ FD + EKN+V++ ++N + K N E +LF +
Sbjct: 285 NCVGNSL---ISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNE 341
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
+ +G VN T S+LS +++GA G+ +H + K+ N + AL MY++CG
Sbjct: 342 IEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGN 401
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
IE A +VF + + NV +W S+I G A HG A++ F +M +G+ P++VT IAVL+A
Sbjct: 402 IEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSA 461
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
CSH GLI +G + F +M+ ++ + P ++HY C+VDLL R+ L+EA E++ +MP + +A+
Sbjct: 462 CSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADAL 521
Query: 401 LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRR 460
+ + L AC N++L + A E +++ +P + Y+L+SN++A+ QW++ ++R+
Sbjct: 522 VLRTFLGACRVH---GNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRK 578
Query: 461 LMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
MKERN+ K GCS IE+ + VH+F VGD HP ++EIY L+ +A+ ++E Y
Sbjct: 579 KMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGY 632
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 174/333 (52%), Gaps = 8/333 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-- 141
A+ VF+++ + + + +I + + G + L+ M+ +G PD FT ++ AC
Sbjct: 98 AYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAE 157
Query: 142 -GDLRQVKGVHSLVVKSK-DFNSVIH-SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
G L + H LV+KS D + + SL + G V A+ +FD+M NV++W
Sbjct: 158 MGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSW 217
Query: 199 TAMINGHVKQKNY-REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
TA+I G+V+ RE I+LF +M V+ N T SVL ACANL LG+ V+ V
Sbjct: 218 TAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVV 277
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
K + + +G +L MY++CG +E A + F ++ EKN+ ++N+I+ A EEA +
Sbjct: 278 KMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFE 337
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL 377
+F +++ +G + T ++L+ S G I KG++I + + + N+ L+ +
Sbjct: 338 LFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKS-GFKSNLHICNALISMY 396
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
R ++ A++V M + N + W S++T A
Sbjct: 397 SRCGNIEAAFQVFNEMG-DGNVISWTSMITGFA 428
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 172/355 (48%), Gaps = 41/355 (11%)
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLV 154
+++ +I YA I + M+ G P+ + + + +AC + + K + +
Sbjct: 9 SWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFL 68
Query: 155 VKSKDFNSVIHSLTRLITFYCNF-GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYRE 213
+K+ F S + LI + GD++SA +FD+M ++NVVTWT MI + R+
Sbjct: 69 LKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRD 128
Query: 214 GIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTD 273
+DLF M SG + TL V+SACA +G LG+ H V K+ + L+ +G +L D
Sbjct: 129 AVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVD 188
Query: 274 MYAKC---GYIEEALRVFKIVLEKNVCTWNSIIGG-LAIHGCGEEAVKMFWQMQMSGIKP 329
MYAKC G +++A +VF + NV +W +II G + GC EA+++F +M +KP
Sbjct: 189 MYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKP 248
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFY----------------------------NMRRDY 361
+ T +VL AC++ I G++++ N R+ +
Sbjct: 249 NHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAF 308
Query: 362 KV--EPNVKHYGCLVDLLCRARLLDEAYEV---IRNMPMEPNAVLWGSLLTACAS 411
V E N+ Y +V+ ++ +EA+E+ I NA + SLL+ +S
Sbjct: 309 DVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 137/270 (50%), Gaps = 15/270 (5%)
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
++++V+W+A+I+ + + E I F M + G NE V AC+N LGK
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 252 VHEFVNKNCIILNDK-LGAALTDMYAKC-GYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
+ F+ K +D +G AL DM+ K G +E A +VF + ++NV TW +I
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
G +AV +F M +SG PD TL V++AC+ GL+ G++ F+ + ++ +V
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQ-FHCLVMKSGLDLDVC- 181
Query: 370 YGC-LVDLLCRARL---LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAM 425
GC LVD+ + +D+A +V MP+ N + W +++T + G + E E+ +
Sbjct: 182 VGCSLVDMYAKCVADGSVDDARKVFDRMPVH-NVMSWTAIITGYVQS-GGCDREAIELFL 239
Query: 426 ERLI-KLEPFNDGNYVLMSNIYAAKAQWDD 454
E + +++P N+ S++ A A D
Sbjct: 240 EMVQGQVKP----NHFTFSSVLKACANLSD 265
>gi|334185681|ref|NP_189505.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273576|sp|Q9LJJ1.1|PP259_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g28640
gi|9294278|dbj|BAB02180.1| unnamed protein product [Arabidopsis thaliana]
gi|332643948|gb|AEE77469.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 279/483 (57%), Gaps = 16/483 (3%)
Query: 38 QKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVN-SSQIAYAHLVFNQIINPST 96
Q+C + Q K H+ I T + ++L L N + YA +F+ I P++
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGN---GLDPDSFTYPILLKACGD---LRQVKGV 150
F ++T+IR + + H G++ + M+ + P T+ L+ AC K +
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQI 138
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H VVK+ F S H T ++ Y + A+ +FD++ + +VV W ++NG+V+
Sbjct: 139 HCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGL 198
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK-LGA 269
EG+++FR+M G+E +E ++ + L+ACA +GA GKW+HEFV K I +D +G
Sbjct: 199 GSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGT 258
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS-GIK 328
AL DMYAKCG IE A+ VFK + +NV +W ++IGG A +G ++A+ +++ GIK
Sbjct: 259 ALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIK 318
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD V L+ VL AC+H G +E+G+ + NM Y++ P +HY C+VDL+CRA LD+A
Sbjct: 319 PDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALN 378
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN----DGNYVLMSN 444
+I MPM+P A +WG+LL C + NVEL E+A++ L+ LE N + V +SN
Sbjct: 379 LIEKMPMKPLASVWGALLNGCRTHK---NVELGELAVKNLLDLEKGNVEEEEAALVQLSN 435
Query: 445 IYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEY 504
IY + + +A K+R ++++R + K PG SV+E++ V +F+ GD HP +I++++
Sbjct: 436 IYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHL 495
Query: 505 VAI 507
+++
Sbjct: 496 LSV 498
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/343 (45%), Positives = 217/343 (63%), Gaps = 10/343 (2%)
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
+N+++ L R G V +A +FD M + V+WTA+I+G VK + E ID FR
Sbjct: 141 YNTMVSGLMR-------NGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFR 193
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
M VE + +TL++V+SACA +GA LG WVH V + + N ++ +L DMYA+CG
Sbjct: 194 AMLLDSVEPDYVTLIAVVSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMYARCG 253
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
++ A +VF + ++ V +WNS+I GLA +G EA+++F +M+ G KPD VTL VLT
Sbjct: 254 QVKLAAQVFHSIRKRTVVSWNSMIVGLAANGLCTEAIELFEEMRRQGFKPDAVTLTGVLT 313
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSHAGL E G + M +Y + ++HYGC+VDLL RA LDEA V+ MPM PN
Sbjct: 314 ACSHAGLTEHGLRYYDLMTTEYGIAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNE 373
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
V+ G+LL C D +++AE M+ L +L+P D NYVL+SNIYAA +WD AGK+R
Sbjct: 374 VVLGALLAGCRMHGD---LDMAEQLMQHLFELDPGGDANYVLLSNIYAAVGKWDGAGKVR 430
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
LMK R + K PG S++EI+ VHEF+ D HP +EEI ML
Sbjct: 431 SLMKARGVKKRPGHSIVEIDGDVHEFVSSDRSHPQAEEIGQML 473
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 116/245 (47%), Gaps = 6/245 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
++ L+ + + A VF+ + P ++ +I G+ + G I + M+ + ++PD
Sbjct: 144 MVSGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDSVEPD 203
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T ++ AC G L VH LV++ + + LI Y G VK A +F
Sbjct: 204 YVTLIAVVSACAEVGALGLGMWVHRLVLR-QGLERNVRVANSLIDMYARCGQVKLAAQVF 262
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+ ++ VV+W +MI G E I+LF +MR G + + +TL VL+AC++ G +E
Sbjct: 263 HSIRKRTVVSWNSMIVGLAANGLCTEAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLTE 322
Query: 248 LG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSIIGG 305
G ++ + I + + D+ + G ++EA+ V + + + N +++ G
Sbjct: 323 HGLRYYDLMTTEYGIAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLAG 382
Query: 306 LAIHG 310
+HG
Sbjct: 383 CRMHG 387
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 114/291 (39%), Gaps = 73/291 (25%)
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDS--GVEVNELTLVSVLSACANLGASELGK 250
++VV+WT+ I +Q + M S N++TL++VLSACA+ +S L +
Sbjct: 30 RDVVSWTSTIARAARQGDLHAAAASLCAMLSSPAAPAPNDVTLLTVLSACADSPSSPLAR 89
Query: 251 WVHEFVNKNCIILNDK---LGAALTDMY-------------------------------A 276
+ ++ + L L L Y
Sbjct: 90 PLALTLHARALKLFPSHLLLSTCLARFYLASRLPHLALQLFDTMPVRSVVTYNTMVSGLM 149
Query: 277 KCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIA 336
+ G ++ A VF + + +W ++I G +G +EA+ F M + ++PD VTLIA
Sbjct: 150 RNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDSVEPDYVTLIA 209
Query: 337 VLTACSHAGLIEKG-----------------------------------KEIFYNMRRDY 361
V++AC+ G + G ++F+++R+
Sbjct: 210 VVSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMYARCGQVKLAAQVFHSIRKRT 269
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
V N G + LC + E +E +R +P+AV +LTAC+ A
Sbjct: 270 VVSWNSMIVGLAANGLCTEAI--ELFEEMRRQGFKPDAVTLTGVLTACSHA 318
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/498 (35%), Positives = 278/498 (55%), Gaps = 48/498 (9%)
Query: 23 NSNTATKSHHHLP-------LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESL 75
S + K H LP + + C + K +HA +A+ + + ++ +
Sbjct: 168 KSYISNKVMHMLPTSQSLASMAEACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAVS 227
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYP 135
N + YA +F+QI P+TF +NT+IRGY+++ + +QL+ QM N +DPD FT+
Sbjct: 228 PNGC-LHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFT 286
Query: 136 ILLKACGDLR-------QVKGVHSLVVKSKD------FNSVIH----------------- 165
LLK +R +H V+K N++IH
Sbjct: 287 FLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNE 346
Query: 166 -------SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
S + L+ + G+++ A+ +F +M E++VV+WT M++G+ + K RE ++LF
Sbjct: 347 MVGADVVSWSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELF 406
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
R+MRD GV +E+ +VSV+SAC +LG E G VH ++++N L AL DMYAKC
Sbjct: 407 REMRDVGVRPDEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKC 466
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G ++ A +VF + K++ TWNS+I A HG E+A ++F M SGI+PD VT +A+L
Sbjct: 467 GCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALL 526
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
TA +H G ++ G +F +M+RDY VE V+HYGC+VD+L RA L+EAY++I +M M N
Sbjct: 527 TAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCN 586
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
V+WG+LL AC D VE+ E +++LI+L+P G Y+L+ +IY A + +A ++
Sbjct: 587 DVVWGALLAACRIYGD---VEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIEL 643
Query: 459 RRLMKERNIVKNPGCSVI 476
RR M K GCS +
Sbjct: 644 RRAMDVNGAKKTLGCSWV 661
>gi|224119882|ref|XP_002318186.1| predicted protein [Populus trichocarpa]
gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/524 (34%), Positives = 281/524 (53%), Gaps = 47/524 (8%)
Query: 23 NSNTATKSHHH---LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLV--- 76
+SN T ++H + L+++C + Q Q+HA I + + S + L K + +L
Sbjct: 6 SSNHITPQNYHSIIIKLIKQCKTISQLHQLHAYTITNTPLSFHSSPSLLTKFLYTLTTKA 65
Query: 77 ----NSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSF 132
++S + YA +FN I NPSTF +NT+IR + + +TQM + DS
Sbjct: 66 KSKSSTSLLHYAKSIFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFFTQMRRLSVPLDSH 125
Query: 133 TYPILLKACGDLRQVKGVHSLVVKSKDF---------NSVIH------------------ 165
++P LKAC L V L + F NS+IH
Sbjct: 126 SFPFTLKACAQLGGVFSARCLHCQVLKFGFLSDLYVMNSLIHGYMVSDMSNDAYKVFDES 185
Query: 166 ------SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
S LI + GDV A+ LFD M ++ V+W +I G K E I+LF
Sbjct: 186 PQRDVVSYNVLIDGFVKAGDVVKARELFDLMPVRDSVSWNTIIAGCAKGDYCEEAIELFD 245
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
M D + + + LVS LSACA LG E GK +H+++ +N + ++ L L D YAKCG
Sbjct: 246 FMMDLEIRPDNVALVSTLSACAQLGELEKGKKIHDYIERNAMKVDTFLSTGLVDFYAKCG 305
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
++ AL++F +KN+ TWN+++ GLA+HG GE ++ F +M +G+KPD ++++ VL
Sbjct: 306 CVDIALKIFDSSSDKNLFTWNAMLVGLAMHGYGELLLEYFSRMIEAGVKPDGISILGVLV 365
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
CSH+GL+++ +++F M Y V KHYGC+ DLL RA L+ + E+I++MP +
Sbjct: 366 GCSHSGLVDEARKLFDEMESVYGVPREPKHYGCMADLLGRAGLIKKVMEMIKDMPRGGDM 425
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
+W LL C D VE+AE A + L++L+P + G Y +++N+YA +W+D +R
Sbjct: 426 SVWSGLLGGCRIHGD---VEIAEKAAKHLMELKPDDGGVYSILANVYANAERWEDVMNIR 482
Query: 460 R-LMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
R L R + K G S+I+++ V HEF+ GD H S++IY +L
Sbjct: 483 RSLSSNRVVTKIAGFSLIQLDGVAHEFIAGDSLHSESDKIYLVL 526
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/484 (33%), Positives = 272/484 (56%), Gaps = 10/484 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP + L + +H +A F+ T ++++ + A LVF + +
Sbjct: 250 LPAVADLKALRIGRSIHGYAFRAGFEYMVNVAT---AMLDTYFKCGSVRSARLVFKGMSS 306
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGV 150
+ ++NT+I GYA+ G + +M+ G++P + + L AC GDL + + V
Sbjct: 307 RNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYV 366
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H L+ K + + LI+ Y V A +F + K VVTW AMI G+ +
Sbjct: 367 HRLL-DEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGC 425
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E ++LF +M+ ++ + TLVSV++A A+L + KW+H + + N + A
Sbjct: 426 VNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTA 485
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L D +AKCG I+ A ++F ++ E++V TWN++I G +G G EA+ +F +MQ +KP+
Sbjct: 486 LIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPN 545
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
++T ++V+ ACSH+GL+E+G F +M+ +Y +EP + HYG +VDLL RA LD+A++ I
Sbjct: 546 EITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFI 605
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
++MP++P + G++L AC NVEL E + L L+P + G +VL++N+YA+ +
Sbjct: 606 QDMPVKPGITVLGAMLGACRIHK---NVELGEKTADELFDLDPDDGGYHVLLANMYASAS 662
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
WD ++R M+++ I K PGCS++E+ + VH F G HP S+ IY+ LE + ++
Sbjct: 663 MWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMK 722
Query: 511 EECY 514
Y
Sbjct: 723 AAGY 726
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 198/378 (52%), Gaps = 9/378 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LL+ CT L + Q+ IIK F N + T KLI + I A VF + +
Sbjct: 50 LLELCTSLKELHQILPLIIKNGFYNEHLFQT---KLISLFCKFNSITEAARVFEPVEHKL 106
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHS 152
++T+++GYA+ ++ Y +M + + P + + LL+ G DLR+ + +H
Sbjct: 107 DVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHG 166
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
+V+ + F S + ++T ++ Y ++ A +F++M ++++V+W ++ G+ + R
Sbjct: 167 MVI-TNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFAR 225
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
+ + +M+++G + + +TLVSVL A A+L A +G+ +H + + + A+
Sbjct: 226 RAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAML 285
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
D Y KCG + A VFK + +NV +WN++I G A +G EEA F +M G++P +V
Sbjct: 286 DTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNV 345
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
+++ L AC++ G +E+G+ + + + + K+ +V L+ + + + +D A V N
Sbjct: 346 SMMGALHACANLGDLERGRYV-HRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGN 404
Query: 393 MPMEPNAVLWGSLLTACA 410
+ V W +++ A
Sbjct: 405 LK-HKTVVTWNAMILGYA 421
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 280/520 (53%), Gaps = 19/520 (3%)
Query: 2 LKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHL---VQFKQVHAQIIKASF 58
L++L S + + S S ++ + +L+ C L V +Q+H + K
Sbjct: 25 LRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGC 84
Query: 59 DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST----FAFNTVIRGYAEAGLGHR 114
+ L LI +A A VF + NP + +N +I GY
Sbjct: 85 ETEPFV---LTALISMYCKCGLVADARKVFEE--NPQSSQLSVCYNALISGYTANSKVTD 139
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLI 171
++ +M G+ DS T L+ C + + +H VK +S + L I
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG-GLDSEVAVLNSFI 198
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
T Y G V++ + LFD+M K ++TW A+I+G+ + + ++L+ +M+ SGV +
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
TLVSVLS+CA+LGA ++G V + V N + N + A MYA+CG + +A VF I+
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
K++ +W ++IG +HG GE + +F M GI+PD + VL+ACSH+GL +KG
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
E+F M+R+YK+EP +HY CLVDLL RA LDEA E I +MP+EP+ +WG+LL AC
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
NV++AE+A ++I+ EP N G YVLMSNIY+ + ++R +M+ER K P
Sbjct: 439 HK---NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
G S +E VH F+ GD H +EE++ ML+ + S+ E
Sbjct: 496 GYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVME 535
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 189/385 (49%), Gaps = 23/385 (5%)
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR-QVKG--VHSLVV 155
+N +R A L I LY M+ +G PD+F++P +LK+C L V G +H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN--VVTWTAMINGHVKQKNYRE 213
K + LT LI+ YC G V A+ +F++ + + V + A+I+G+ +
Sbjct: 81 KG-GCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 214 GIDLFRKMRDSGVEVNELTLVSVLSACAN-----LGASELGKWVHEFVNKNCIILNDKLG 268
+FR+M+++GV V+ +T++ ++ C LG S G+ V ++ +LN
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLN---- 195
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+ MY KCG +E R+F + K + TWN++I G + +G + ++++ QM+ SG+
Sbjct: 196 -SFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD TL++VL++C+H G + G E+ + + V PNV + + R L +A
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV-PNVFVSNASISMYARCGNLAKARA 313
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
V MP++ + V W +++ G E+ + + +IK DG +M +
Sbjct: 314 VFDIMPVK-SLVSWTAMIGCYGMHGMG---EIGLMLFDDMIKRGIRPDGAVFVMVLSACS 369
Query: 449 KAQWDDAG-KMRRLMKERNIVKNPG 472
+ D G ++ R MK R PG
Sbjct: 370 HSGLTDKGLELFRAMK-REYKLEPG 393
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 274/505 (54%), Gaps = 14/505 (2%)
Query: 16 NSANSHKNSNTATKSHHHLPLLQKCT---HLVQFKQVHAQIIKASFDNRTISDTQLAKLI 72
S+N + S + LL+KCT L+Q + VHA I+++ F + + L +
Sbjct: 46 TSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNM- 104
Query: 73 ESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSF 132
+ A VF ++ + T+I GY++ + + QM+ G P+ F
Sbjct: 105 --YAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEF 162
Query: 133 TYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
T ++KA R+ +H VK F+S +H + L+ Y +G + AQL+FD
Sbjct: 163 TLSSVIKAAAAERRGCCGHQLHGFCVKC-GFDSNVHVGSALLDLYTRYGLMDDAQLVFDA 221
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
+ +N V+W A+I GH ++ + ++LF+ M G + + S+ AC++ G E G
Sbjct: 222 LESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
KWVH ++ K+ L G L DMYAK G I +A ++F + +++V +WNS++ A H
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 341
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
G G+EAV F +M+ GI+P++++ ++VLTACSH+GL+++G + M++D + P H
Sbjct: 342 GFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWH 400
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
Y +VDLL RA L+ A I MP+EP A +W +LL AC N EL A E +
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH---KNTELGAYAAEHVF 457
Query: 430 KLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGD 489
+L+P + G +V++ NIYA+ +W+DA ++R+ MKE + K P CS +EI + +H F+ D
Sbjct: 458 ELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVAND 517
Query: 490 GRHPCSEEIYSMLEYVAISLREECY 514
RHP EEI E V ++E Y
Sbjct: 518 ERHPQREEIARKWEEVLAKIKELGY 542
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/488 (34%), Positives = 274/488 (56%), Gaps = 38/488 (7%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
+ +Q+HAQ + + N +L+ES V S+I+YA +F +I F +NT+IR
Sbjct: 3 EVRQLHAQFVVSGLLNH--HSLCGRRLLESYVTMSEISYARSIFERIPYLDVFVYNTMIR 60
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVK----- 156
G + + L+ +++ L PD++TY +LKAC + L + K VH ++K
Sbjct: 61 GLMLGKRPYDSLLLFNELLLGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGISP 120
Query: 157 -SKDFNSVIHSLTR------------------------LITFYCNFGDVKSAQLLFDQMT 191
+ +S+IH T +I+ Y + G V A+ +FDQM
Sbjct: 121 NTHIHSSLIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFDQMK 180
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
K+V +W+A+I G K + E + LF M S NE LVS+LSACA+LGA G+W
Sbjct: 181 AKDVASWSAIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQGRW 240
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+H ++++ ++ +L AL DMYAKCG I+ + F+ + +++ TW +II G AI+G
Sbjct: 241 IHAYIDRIGADMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAIYGQ 300
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
++ ++F +M GI P+ V +A+L+ACSHAG +E+GK F M D + P+++HYG
Sbjct: 301 AKKCFELFEEMLADGIYPNGVIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSIEHYG 360
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VDLL RA L EA E I +MP +PN+V+WGS+L+AC + +D + A LI+L
Sbjct: 361 CMVDLLGRAGRLKEAEEFIISMPEKPNSVIWGSMLSACRTHND---LNRGSWAFRHLIEL 417
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
EP + Y L ++ + +A K+R++++++ + G S IE++ +HEF+VGD
Sbjct: 418 EPRSGDRYKLAGLMFGNAGEKQEATKIRKMIEDQGMETTSGSSFIEVDGTIHEFLVGDTI 477
Query: 492 HPCSEEIY 499
H + EIY
Sbjct: 478 HNEAAEIY 485
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 142/300 (47%), Gaps = 37/300 (12%)
Query: 144 LRQVKGVHSLVVKSKDFNSVIHSL--TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
+ +V+ +H+ V S N HSL RL+ Y ++ A+ +F+++ +V + M
Sbjct: 1 MHEVRQLHAQFVVSGLLNH--HSLCGRRLLESYVTMSEISYARSIFERIPYLDVFVYNTM 58
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
I G + K + + LF ++ ++ + T VL AC+N A GK VH + K I
Sbjct: 59 IRGLMLGKRPYDSLLLFNELLLGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGI 118
Query: 262 ILNDKLGAALTDMY--------AKC-----------------------GYIEEALRVFKI 290
N + ++L MY A+C G++++A +F
Sbjct: 119 SPNTHIHSSLIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFDQ 178
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+ K+V +W++II G +G EA+ +F M +S P++ L+++L+AC+H G + +G
Sbjct: 179 MKAKDVASWSAIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQG 238
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ I + R + +++ L+D+ + + Y+ R MP + V WG++++ A
Sbjct: 239 RWIHAYIDR-IGADMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRR-DIVTWGAIISGFA 296
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 136/316 (43%), Gaps = 49/316 (15%)
Query: 36 LLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L+ C++ L + KQVH QIIKA T + LI +S I A V +
Sbjct: 93 VLKACSNQKALPEGKQVHCQIIKAGISPNTHIHSS---LIHMYTSSGSIVEAECVLREFS 149
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQM---------------IGNGLDPD------- 130
+T A N++I GY G + ++ QM NG+ +
Sbjct: 150 EENTLAKNSMISGYLSKGHVDKARAMFDQMKAKDVASWSAIITGCTKNGMHTEALALFED 209
Query: 131 ---SFTYP------ILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG 178
S T P LL AC G L Q + +H+ + + S+ S T LI Y G
Sbjct: 210 MMVSHTLPNESALVSLLSACAHLGALHQGRWIHAYIDRIGADMSIRLS-TALIDMYAKCG 268
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
D++S F +M +++VTW A+I+G ++ +LF +M G+ N + V++LS
Sbjct: 269 DIQSGYKFFRKMPRRDIVTWGAIISGFAIYGQAKKCFELFEEMLADGIYPNGVIFVAILS 328
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLG----AALTDMYAKCGYIEEALRVFKIVLEK 294
AC++ G E GK + N+ + L + + D+ + G ++EA + EK
Sbjct: 329 ACSHAGYVEEGKL---YFNQMMVDLGIRPSIEHYGCMVDLLGRAGRLKEAEEFIISMPEK 385
Query: 295 -NVCTWNSIIGGLAIH 309
N W S++ H
Sbjct: 386 PNSVIWGSMLSACRTH 401
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 263/451 (58%), Gaps = 7/451 (1%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI L+ ++ + +F ++ + ++ ++I G+ + GL I ++ +M L D
Sbjct: 215 LIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMD 274
Query: 131 SFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
+T+ +L ACG L++ K VH+ ++++ D+ I + L+ YC ++KSA+ +F
Sbjct: 275 QYTFGSVLTACGGVMALQEGKQVHAYIIRT-DYKDNIFVASALVDMYCKCKNIKSAEAVF 333
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
+MT KNVV+WTAM+ G+ + E + F M+ G+E ++ TL SV+S+CANL + E
Sbjct: 334 KKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLE 393
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
G H + +I + AL +Y KCG IE++ R+F + K+ TW +++ G A
Sbjct: 394 EGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYA 453
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
G E + +F M G+KPD VT I VL+ACS AGL+EKG +IF +M ++ + P
Sbjct: 454 QFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQ 513
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
HY C++DL RA ++EA I MP P+A+ W +LL++C N+++ + A E
Sbjct: 514 DHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFY---GNMDIGKWAAEF 570
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L++L+P N +YVL+S++YAAK +W++ ++R+ M+++ + K PGCS I+ + VH F
Sbjct: 571 LMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSA 630
Query: 488 GDGRHPCSEEIYSMLEYVAISLREECYAARM 518
D +P S++IYS LE + + +E Y M
Sbjct: 631 DDKSNPFSDQIYSELEKLNYKMIKEGYVPDM 661
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 187/393 (47%), Gaps = 74/393 (18%)
Query: 31 HHHLPLLQKC--TH-LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLV 87
+H+ LL+ C TH + K +H+ IIK T L LI S I YA V
Sbjct: 10 NHYCALLKLCCETHNFTKAKNLHSHIIKTLPYPETF---LLNNLISSYAKLGSIPYACKV 66
Query: 88 FNQIINPSTFAFNTV-------------------------------IRGYAEAGLGHRGI 116
F+Q+ +P+ +++NT+ I GYA GL ++ +
Sbjct: 67 FDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSV 126
Query: 117 QLYTQMIGN----GLDPDSF-TYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLI 171
+ Y M+ N L+ +F T IL G ++ + +H VVK F S + + L+
Sbjct: 127 KAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKF-GFMSYVFVGSPLV 185
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVV-------------------------------TWTA 200
Y G + A+ +FD++ EKNVV +WT+
Sbjct: 186 DMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTS 245
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
MI G + R+ ID+FR+M+ +++++ T SVL+AC + A + GK VH ++ +
Sbjct: 246 MITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD 305
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
N + +AL DMY KC I+ A VFK + KNV +W +++ G +G EEAVK F
Sbjct: 306 YKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFS 365
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
MQ GI+PDD TL +V+++C++ +E+G +
Sbjct: 366 DMQKYGIEPDDFTLGSVISSCANLASLEEGAQF 398
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 37/279 (13%)
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-- 221
++S +++ Y G V + LFD M ++ V+W ++I+G+ + + + M
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK 134
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK---- 277
D +N +T ++L + G +LG+ +H V K + +G+ L DMY+K
Sbjct: 135 NDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMI 194
Query: 278 ---------------------------CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
CG +E++ R+F + E++ +W S+I G +G
Sbjct: 195 SCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNG 254
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKH 369
+A+ +F +M++ ++ D T +VLTAC +++GK++ Y +R DYK N+
Sbjct: 255 LDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYK--DNIFV 312
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
LVD+ C+ + + A V + M + N V W ++L
Sbjct: 313 ASALVDMYCKCKNIKSAEAVFKKMTCK-NVVSWTAMLVG 350
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 274/507 (54%), Gaps = 59/507 (11%)
Query: 25 NTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYA 84
T+T++ + L+ C + KQ+HAQ + + +L+E+ V SQI YA
Sbjct: 8 TTSTRAPATIISLRTCHDFQEVKQLHAQFVVSGLLG--YHPLCARRLLEAYVTMSQIYYA 65
Query: 85 HLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL 144
+F +I +P F +NT+IRG L D+FTY +LKAC L
Sbjct: 66 FSIFERIPSPDVFVYNTMIRG---------------------LTMDNFTYTFVLKACSHL 104
Query: 145 R---QVKGVHSLVVK------SKDFNSVIHSLTR------------------------LI 171
+ + K VH ++K + +S+IH T +I
Sbjct: 105 KAPFEGKQVHCQIIKAGIVPDTHIHSSLIHMYTNSGSIDDAERVLGEFSEENTLAKNAMI 164
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
+ Y G V A+ +FD M K+ +W+A+I G+ K + E + LF+ M S + NE
Sbjct: 165 SGYLTEGRVDKARKMFDDMAAKDAASWSALITGYTKNGMHTEALALFQDMMVSHILPNEA 224
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
LVS+LSAC LG G+W+H +++K ++++ KL AL DMYAK G IE +F+ +
Sbjct: 225 ALVSLLSACGQLGTLHQGRWIHAYIDKTRVLMSTKLTTALIDMYAKSGSIECGYGLFQKM 284
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
++V TW +I AIHG + ++F +M GI+P+ V +A+L+ACSHAG +E+G+
Sbjct: 285 ARRDVVTWGVMISAFAIHGHASKCFQLFDEMLADGIRPNKVIFVAILSACSHAGCVEEGR 344
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
+ F M + ++P+++HYGC+VDLL RA LL +A ++I +MP +PN+++WGSLL AC +
Sbjct: 345 QYFSQMEHGFGIKPSIEHYGCMVDLLGRAGLLADAEQLILSMPKQPNSIIWGSLLGACRT 404
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
+D ++ A E L++LEP + + L ++A + ++A K+R+++ E+ +V
Sbjct: 405 HND---LKRGTWAFENLMELEPTSGDRHKLAGLMFANAGEKEEAAKIRKMIHEKEMVTTC 461
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEI 498
G S IE+ VHEF VG H + +I
Sbjct: 462 GSSFIEVEGAVHEFTVGYTVHNKARDI 488
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/491 (33%), Positives = 280/491 (57%), Gaps = 11/491 (2%)
Query: 29 KSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF 88
KS + ++ HL + +Q HA ++ S L KL+ + IAY +F
Sbjct: 9 KSAEYEAVVSAGPHLRRLQQAHAHLVVTGCHR---SRALLTKLLTLSCAAGSIAYTRRLF 65
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV- 147
+ +P +F FN++I+ ++ G + Y +M+ + + P ++T+ ++KAC DL +
Sbjct: 66 RSVSDPDSFLFNSLIKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLC 125
Query: 148 --KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
VHS V S + S LI FY + A+ +FD+M ++++V W +MI+G+
Sbjct: 126 IGTLVHSHVFVS-GYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGY 184
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ E +++F KMR+S VE + T VSVLSAC+ LG+ + G W+H+ + + I +N
Sbjct: 185 EQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNV 244
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
L +L +M+++CG + A VF ++E NV W ++I G +HG G EA+++F +M+
Sbjct: 245 VLATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKAR 304
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G+ P+ VT +AVL+AC+HAGLI++G+ +F +M+++Y V P V+H+ C+VD+ R LL+E
Sbjct: 305 GVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNE 364
Query: 386 AYEVIRNM-PMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSN 444
AY+ ++ + E +W ++L AC N +L E LI EP N G+YVL+SN
Sbjct: 365 AYQFVKGLNSDELVPAVWTAMLGACKMHK---NFDLGVEVAENLINAEPENPGHYVLLSN 421
Query: 445 IYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEY 504
+YA + D +R +M +R + K G S I++++ + F +GD HP + EIY L+
Sbjct: 422 MYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCFLDE 481
Query: 505 VAISLREECYA 515
+ ++ YA
Sbjct: 482 LIWRCKDAGYA 492
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/425 (36%), Positives = 256/425 (60%), Gaps = 10/425 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI V + + AH +F+Q+ + ++ T+I Y++ + + ++L M+ +G+ P+
Sbjct: 54 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPN 113
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
+TY +L+AC + V+ +H ++K + S ++ + LI + G+ + A +FD+M
Sbjct: 114 VYTYSSVLRACNGMSDVRMLHCGIIK-EGLESDVYVRSALIDVFAKLGEPEDALSVFDEM 172
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
+ + W ++I G + ++LF++M+ +G + TL SVL AC L ELG
Sbjct: 173 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 232
Query: 251 WVHEFVNK--NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
H + K +ILN+ AL DMY KCG +E+A RVF + E++V TW+++I GLA
Sbjct: 233 QAHVHIVKYDQDLILNN----ALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQ 288
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
+G +EA+K+F M+ SG KP+ +T++ VL ACSHAGL+E G F +M++ Y + P +
Sbjct: 289 NGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGRE 348
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HYGC++DLL +A LD+A +++ M EP+AV W +LL AC N+ LAE A +++
Sbjct: 349 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQ---RNMVLAEYAAKKV 405
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
I L+P + G Y ++SNIYA +WD ++R+ M++ I K PGCS IE+N +H F++G
Sbjct: 406 IALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIG 465
Query: 489 DGRHP 493
D HP
Sbjct: 466 DESHP 470
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 154/289 (53%), Gaps = 11/289 (3%)
Query: 125 NGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNS---VIHSLTRLITFYCNFGDVK 181
+GL DS TY L+K C R V +L+ + FN ++ + LI Y F +
Sbjct: 7 HGLWADSATYSELIKCCLSHRAVHE-GNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLN 65
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
A LFDQM ++NV++WT MI+ + K K +++ ++L M GV N T SVL AC
Sbjct: 66 DAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACN 125
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
G S++ + +H + K + + + +AL D++AK G E+AL VF ++ + WNS
Sbjct: 126 --GMSDV-RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 182
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
IIGG A + + A+++F +M+ +G + TL +VL AC+ L+E G + ++
Sbjct: 183 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI---V 239
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
K + ++ LVD+ C+ L++A V M E + + W ++++ A
Sbjct: 240 KYDQDLILNNALVDMYCKCGSLEDARRVFNQMK-ERDVITWSTMISGLA 287
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 274/505 (54%), Gaps = 14/505 (2%)
Query: 16 NSANSHKNSNTATKSHHHLPLLQKCT---HLVQFKQVHAQIIKASFDNRTISDTQLAKLI 72
S+N + S + LL+KCT L+Q + VHA I+++ F + + L +
Sbjct: 46 TSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNM- 104
Query: 73 ESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSF 132
+ A VF ++ + T+I GY++ + + QM+ G P+ F
Sbjct: 105 --YAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEF 162
Query: 133 TYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
T ++KA R+ +H VK F+S +H + L+ Y +G + AQL+FD
Sbjct: 163 TLSSVIKAAAAERRGCCGHQLHGFCVKC-GFDSNVHVGSALLDLYTRYGLMDDAQLVFDA 221
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
+ +N V+W A+I GH ++ + ++LF+ M G + + S+ AC++ G E G
Sbjct: 222 LESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
KWVH ++ K+ L G L DMYAK G I +A ++F + +++V +WNS++ A H
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 341
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
G G+EAV F +M+ GI+P++++ ++VLTACSH+GL+++G + M++D + P H
Sbjct: 342 GFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWH 400
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
Y +VDLL RA L+ A I MP+EP A +W +LL AC N EL A E +
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH---KNTELGAYAAEHVF 457
Query: 430 KLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGD 489
+L+P + G +V++ NIYA+ +W+DA ++R+ MKE + K P CS +EI + +H F+ D
Sbjct: 458 ELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVAND 517
Query: 490 GRHPCSEEIYSMLEYVAISLREECY 514
RHP EEI E V ++E Y
Sbjct: 518 ERHPQREEIARKWEEVLAKIKELGY 542
>gi|15233645|ref|NP_195514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213618|sp|Q9SZK1.1|PP355_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g38010
gi|4467107|emb|CAB37541.1| putative protein [Arabidopsis thaliana]
gi|7270784|emb|CAB80466.1| putative protein [Arabidopsis thaliana]
gi|332661463|gb|AEE86863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/451 (37%), Positives = 265/451 (58%), Gaps = 17/451 (3%)
Query: 35 PLLQKC---THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
P+ + C + + + KQ+H + K F + L S A VF ++
Sbjct: 111 PVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRN---ACKVFGEM 167
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVK 148
++ +I G+ GL + +++M ++P+ TY +L + G L K
Sbjct: 168 PVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGK 224
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
G+H L++K S + + LI Y + A +F ++ +K+ V+W +MI+G V
Sbjct: 225 GIHGLILKRASLIS-LETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHC 283
Query: 209 KNYREGIDLFRKMR-DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
+ +E IDLF M+ SG++ + L SVLSACA+LGA + G+WVHE++ I + +
Sbjct: 284 ERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHI 343
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
G A+ DMYAKCGYIE AL +F + KNV TWN+++GGLAIHG G E+++ F +M G
Sbjct: 344 GTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGF 403
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMR-RDYKVEPNVKHYGCLVDLLCRARLLDEA 386
KP+ VT +A L AC H GL+++G+ F+ M+ R+Y + P ++HYGC++DLLCRA LLDEA
Sbjct: 404 KPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEA 463
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
E+++ MP++P+ + G++L+AC + G +EL + ++ + +E + G YVL+SNI+
Sbjct: 464 LELVKAMPVKPDVRICGAILSAC--KNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIF 521
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
AA +WDD ++RRLMK + I K PG S IE
Sbjct: 522 AANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 201/387 (51%), Gaps = 23/387 (5%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA-YAHLVFNQII 92
L L+ +C+ L FKQ+ Q+I D + K++ L S+ A Y+ ++ + I
Sbjct: 10 LELISRCSSLRVFKQIQTQLITRDLLR---DDLIINKVVTFLGKSADFASYSSVILHSIR 66
Query: 93 NP-STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVK 148
+ S+F++NT++ YA I Y + NG PD FT+P + KACG +R+ K
Sbjct: 67 SVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
+H +V K F I+ L+ FY G+ ++A +F +M ++VV+WT +I G +
Sbjct: 127 QIHGIVTK-MGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
Y+E +D F KM VE N T V VL + +G LGK +H + K +++ + G
Sbjct: 186 GLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETG 242
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM-SGI 327
AL DMY KC + +A+RVF + +K+ +WNS+I GL +EA+ +F MQ SGI
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK---HYG-CLVDLLCRARLL 383
KPD L +VL+AC+ G ++ G+ + +Y + +K H G +VD+ + +
Sbjct: 303 KPDGHILTSVLSACASLGAVDHGRWV-----HEYILTAGIKWDTHIGTAIVDMYAKCGYI 357
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ A E+ N N W +LL A
Sbjct: 358 ETALEIF-NGIRSKNVFTWNALLGGLA 383
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 282/540 (52%), Gaps = 78/540 (14%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+QVH + FD+ + + L + + +QI AH VF+++ P +++ ++ Y
Sbjct: 134 RQVHGIASVSGFDSDSFVQSSLVHM---YIKCNQIRDAHRVFDRMFEPDVVSWSALVAAY 190
Query: 107 AEAG-----------LGHRGIQ------------------------LYTQMIGNGLDPDS 131
A G +G G+Q ++ M G +PD
Sbjct: 191 ARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDG 250
Query: 132 FTYPILLKACGDLRQ-VKGV--HSLVVK----------------------SKDFNSVIHS 166
T +L A GDL V G+ H V+K + + + V
Sbjct: 251 TTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQ 310
Query: 167 LTRLITFYCNF--------GDVKSAQLLF----DQMTEKNVVTWTAMINGHVKQKNYREG 214
+ + CN G V+S+ LF DQ E NVV+WT+MI + E
Sbjct: 311 MDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEA 370
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
++LFR+M+ +GV+ N +T+ +L AC N+ A GK H F + I + +G+AL DM
Sbjct: 371 LELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDM 430
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
YAKCG I+ + F + KN+ WN++I G A+HG +EA+++F MQ SG KPD ++
Sbjct: 431 YAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISF 490
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
VL+ACS +GL E+G F +M Y +E V+HY C+V LL RA L++AY +IR MP
Sbjct: 491 TCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMP 550
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
+ P+A +WG+LL++C + NV L E+A E+L +LEP N GNY+L+SNIYA+K W++
Sbjct: 551 VNPDACVWGALLSSCRVHN---NVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNE 607
Query: 455 AGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
++R +MK + + KNPGCS IE+ + VH + GD HP +I L+ +++ +++ Y
Sbjct: 608 VNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGY 667
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 204/446 (45%), Gaps = 89/446 (19%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
L Q +Q HA I+K N DT LA KL+ N+ A A LV + + P+ F+F+T
Sbjct: 29 LSQTRQAHAHILKTGLFN----DTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFST 84
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL------RQVKGVHSLVV 155
+I +++ H + ++QM+ GL PD+ P +KAC L RQV G+ S V
Sbjct: 85 LIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIAS--V 142
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
D +S + S L+ Y ++ A +FD+M E +VV+W+A++ + +Q E
Sbjct: 143 SGFDSDSFVQS--SLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAK 200
Query: 216 DLFRKMRDSGVEVNEL-----------------------------------TLVSVLSAC 240
LF +M DSGV+ N + T+ SVL A
Sbjct: 201 RLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAV 260
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC---------------------- 278
+L +G +H +V K ++ + + +AL DMY KC
Sbjct: 261 GDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCN 320
Query: 279 ---------GYIEEALRVFKIV----LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
G +E +LR+F+ + +E NV +W S+I + +G EA+++F +MQ++
Sbjct: 321 AFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIA 380
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
G+KP+ VT+ +L AC + + GK +++RR + +V L+D+ + +
Sbjct: 381 GVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRG--ISTDVYVGSALIDMYAKCGRIQ 438
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTACA 410
+ +P + N V W +++ A
Sbjct: 439 ASRICFDGIPTK-NLVCWNAVIAGYA 463
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 182/496 (36%), Positives = 285/496 (57%), Gaps = 19/496 (3%)
Query: 31 HHHLPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLV 87
H + L+ CT L Q +H +I D T+L + L I A V
Sbjct: 79 HTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSEL---DSIDNARKV 135
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC------ 141
F++ + + +N + R AG G + LY +M G+ D FTY +LKAC
Sbjct: 136 FDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAF 195
Query: 142 -GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
L + +H +++ F +H +T L+ Y FG V +A +FDQM KNVV+W+A
Sbjct: 196 VSLLLNGREIHGHILR-HGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSA 254
Query: 201 MINGHVKQKNYREGIDLFRKM--RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
MI + K E ++LFRKM + + N +T+VSVL ACA L A E GK +H ++ +
Sbjct: 255 MIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILR 314
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+ + +AL +YA+CG +E RVF+ + +++V +WNS+I IHG G +A+++
Sbjct: 315 RGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQI 374
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
F +M G+ P ++ ++VL ACSHAGL+E+GK +F +M R +K+ P+V+HY C+VDLL
Sbjct: 375 FKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLG 434
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGN 438
RA LDEA ++I +M +EP +WGSLL +C NVELAE A RL +LEP N GN
Sbjct: 435 RANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIH---CNVELAERATSRLFELEPTNAGN 491
Query: 439 YVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
YVL+++IYA W++ +++ L++ R + K PG S IEI ++ FM D +P E++
Sbjct: 492 YVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQL 551
Query: 499 YSMLEYVAISLREECY 514
+++L +++ ++E+ Y
Sbjct: 552 HALLLKLSMEMKEKGY 567
>gi|147833682|emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]
Length = 583
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/491 (36%), Positives = 291/491 (59%), Gaps = 19/491 (3%)
Query: 21 HKNSNTATKSHHH--LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNS 78
H SN+ + +HH L L CT + Q KQ+HAQ I+ + + + ++++ +
Sbjct: 15 HAISNSDSXTHHRRLLLFLNSCTCMSQLKQLHAQTIRTTSSHHPNTFFLYSRILH-FSSL 73
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEA-GLGHRGIQLYTQMIGNG-LDPDSFTYPI 136
+ YA VF+QI NP++F +N +IR A + I LY +M+ G + D T+P
Sbjct: 74 HDLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPF 133
Query: 137 LLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
+LKAC L + + +H+ ++K F+S ++ L+ FY + A+ +FD+M+E+
Sbjct: 134 VLKACAYLFALSEGEQIHAQILK-LGFDSBVYINNSLVHFYATCDRLDFAKGVFDRMSER 192
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
++V+W +I+ V+ + ++LF +M+ E + T+ S+ +ACA +G+ LG W H
Sbjct: 193 SLVSWNVVIDAFVRFGEFDAALNLFGEMQKF-FEPDGYTIQSIANACAGMGSLSLGMWAH 251
Query: 254 EFVNK--NCIILNDKL-GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
F+ K + +ND L +L DMY KCG +E AL++F + +++V +WNS+I G + HG
Sbjct: 252 VFLLKKXDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHG 311
Query: 311 CGEEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
A++ F M + + P+ +T + VL+AC+H GL+ +G+ F M +YK++P ++H
Sbjct: 312 EVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEH 371
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
YGCLVDLL RA L+DEA +V+ NMPM P+ V+W SLL AC + G VEL+E R++
Sbjct: 372 YGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAG--VELSEEMASRVL 429
Query: 430 KLE-PFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIN--DVVHEFM 486
+ E G YVL+S +YA+ ++W+D G +R+LM ++ +VK PGCS IEI DV+ E +
Sbjct: 430 EAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIXALDVIEERV 489
Query: 487 VGDGRHPCSEE 497
G P S +
Sbjct: 490 ERVGYSPDSSQ 500
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 263/440 (59%), Gaps = 8/440 (1%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
+H +K F++ L I Q+ +A +F+ +++ ++NT+I GY+
Sbjct: 45 SIHVHALKLGFESYLFVSNAL---IHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYS 101
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLV--VKSKDFNSVIH 165
+ ++L+ M + D+ T ++ AC L + S+V +K + ++
Sbjct: 102 QYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVY 161
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
LI Y G++ +A+ LFD M +++V++WT+MI G+ + + + + LF++M +
Sbjct: 162 LGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAK 221
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
V+ +++T+ SVLSACA+LG ++G VH ++ ++ + + +G +L DMY KCG +E+AL
Sbjct: 222 VKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKAL 281
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
VF + +K+ +W S+I GLA++G A+ +F QM G++P T + +L AC+HAG
Sbjct: 282 EVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAG 341
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
L+ KG E F +M + + P +KHYGC+VDLL R+ +D+AYE I+ MP+ P+ V+W L
Sbjct: 342 LVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRIL 401
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L+AC NV LAEIA +RL++L+P + GNYVL+SN YA +WDDA KMR LM++
Sbjct: 402 LSACKLH---GNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDS 458
Query: 466 NIVKNPGCSVIEINDVVHEF 485
++ K G S IE++ +V +
Sbjct: 459 DVQKPSGSSSIEVDGMVSNY 478
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/418 (37%), Positives = 256/418 (61%), Gaps = 11/418 (2%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
+F ++ T ++N+++ G +AG +L+ +M D ++ +L R+
Sbjct: 176 LFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCRE 231
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT--EKNVVTWTAMING 204
+ L K + N+V S + ++ Y GD++ A+++FD+M KNVVTWT +I G
Sbjct: 232 MSKAFELFEKMPERNTV--SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAG 289
Query: 205 HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
+ ++ +E L +M SG++ + ++S+L+AC G LG +H + ++ + N
Sbjct: 290 YAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN 349
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
+ AL DMYAKCG +++A VF + +K++ +WN+++ GL +HG G+EA+++F +M+
Sbjct: 350 AYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR 409
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
GI+PD VT IAVL +C+HAGLI++G + FY+M + Y + P V+HYGCLVDLL R L
Sbjct: 410 EGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLK 469
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSN 444
EA +V++ MPMEPN V+WG+LL AC ++ V++A+ ++ L+KL+P + GNY L+SN
Sbjct: 470 EAIKVVQTMPMEPNVVIWGALLGACRMHNE---VDIAKEVLDNLVKLDPCDPGNYSLLSN 526
Query: 445 IYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
IYAA W+ +R MK + K G S +E+ D +HEF V D HP S++IY ML
Sbjct: 527 IYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQML 584
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 196/378 (51%), Gaps = 23/378 (6%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPS 95
L KC +L Q KQ+HAQII+ + D +A KLI +L Q A VFNQ+ P+
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHE----DLHIAPKLISALSLCRQTNLAVRVFNQVQEPN 81
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHS 152
N++IR +A+ ++ ++++M GL D+FTYP LLKAC L VK +H+
Sbjct: 82 VHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHN 141
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFG--DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
+ K +S I+ LI Y G V+ A LF++M+E++ V+W +M+ G VK
Sbjct: 142 HIEK-LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
R+ LF +M + ++ T++ + C + S+ + + +N + +
Sbjct: 201 LRDARRLFDEMPQRDL-ISWNTMLDGYARCREM--SKAFELFEKMPERNTVSW-----ST 252
Query: 271 LTDMYAKCGYIEEALRVF-KIVLE-KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+ Y+K G +E A +F K+ L KNV TW II G A G +EA ++ QM SG+K
Sbjct: 253 MVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLK 312
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
D +I++L AC+ +GL+ G I ++R + N L+D+ + L +A++
Sbjct: 313 FDAAAVISILAACTESGLLSLGMRIHSILKRS-NLGSNAYVLNALLDMYAKCGNLKKAFD 371
Query: 389 VIRNMPMEPNAVLWGSLL 406
V ++P + + V W ++L
Sbjct: 372 VFNDIP-KKDLVSWNTML 388
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 22/173 (12%)
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL 127
L L++ + A VFN I ++NT++ G G G I+L+++M G+
Sbjct: 353 LNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGI 412
Query: 128 DPDSFTYPILLKACGD----------LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNF 177
PD T+ +L +C ++ V+ LV + + + ++ L R+
Sbjct: 413 RPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRV------- 465
Query: 178 GDVKSAQLLFDQMT-EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
G +K A + M E NVV W A++ G + N +D+ +++ D+ V+++
Sbjct: 466 GRLKEAIKVVQTMPMEPNVVIWGALL-GACRMHNE---VDIAKEVLDNLVKLD 514
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 284/521 (54%), Gaps = 49/521 (9%)
Query: 37 LQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L C L+ Q+H I K+ + ++ + L++ +A A F+ +
Sbjct: 158 LSACAGLMDLSIGVQIHGLIAKSRY---SLDVYMGSALVDMYSKCRVVASAQRAFDDMDV 214
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GV 150
+ ++N++I Y + G + ++++ +M+ G++PD T + AC L ++ +
Sbjct: 215 RNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQI 274
Query: 151 HSLVVKSKDF-------NSVIH------------------------SLTRLITFYCNFGD 179
H+ V+K + N+++ S T +++ Y
Sbjct: 275 HARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASS 334
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
VK+A+L+F M E+NVV+W A+I G+ + E + LF ++ + T ++L+A
Sbjct: 335 VKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNA 394
Query: 240 CANLGASELGKWVHEFVNKNCIILNDK------LGAALTDMYAKCGYIEEALRVFKIVLE 293
CANL +LG+ H + K+ +G +L DMY KCG +E+ VF+ +LE
Sbjct: 395 CANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLE 454
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
++ +WN++I G A +G G EA+++F +M +SG +PD VT+I VL+ACSHAGL+E+G+
Sbjct: 455 RDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCY 514
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
F +M ++ + P HY C+VDLL RA LDEA +I+ MPMEP+AV+WGSLL AC
Sbjct: 515 FQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVH- 573
Query: 414 DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGC 473
N+ L + ERL++++P N G YVL+SN+YA +W D ++R+ M++ ++K PGC
Sbjct: 574 --GNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGC 631
Query: 474 SVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
S I I +H FMV D RHP ++IY +L+ + ++ Y
Sbjct: 632 SWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGY 672
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 165/348 (47%), Gaps = 37/348 (10%)
Query: 50 HAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEA 109
H + K D + + AKL+++ V S + A LV +II + F+ I+
Sbjct: 4 HGLVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIK-TQFSSEIFIQ----- 57
Query: 110 GLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDF--NSVIHSL 167
+R + +Y + CG L + V + + F N+V+ +L
Sbjct: 58 ---NRLVDVYGK-------------------CGFLEDARKVFDHMQQRNTFSWNAVLGAL 95
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
T+ FG + A LF M E++ +W AM++G ++ + E + M
Sbjct: 96 TK-------FGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFV 148
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+NE + S LSACA L +G +H + K+ L+ +G+AL DMY+KC + A R
Sbjct: 149 LNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRA 208
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
F + +N+ +WNS+I +G +A+++F +M GI+PD++TL +V +AC+ I
Sbjct: 209 FDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAI 268
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
+G +I + + K ++ LVD+ + R ++EA V MP+
Sbjct: 269 REGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF----------W 320
L D+Y KCG++E+A +VF + ++N +WN+++G L G +EA+ +F W
Sbjct: 60 LVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSW 119
Query: 321 QMQMSGIKPDD---------------------VTLIAVLTACSHAGLIEKGKEIFYNMRR 359
+SG D + + L+AC+ + G +I + +
Sbjct: 120 NAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQI-HGLIA 178
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
+ +V LVD+ + R++ A +M + N V W SL+T
Sbjct: 179 KSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVR-NIVSWNSLIT 225
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/445 (37%), Positives = 266/445 (59%), Gaps = 11/445 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDP 129
++ ++++ + A L F+Q+ T ++NT+I G+++ G+ + +L+ M + N +
Sbjct: 74 MLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSW 133
Query: 130 DSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
++ + GDL K + + SV+ + T +IT + FG ++ A+ F++
Sbjct: 134 NAMISGYV--ESGDLDLAKQLFEVA----PVRSVV-AWTAMITGFMKFGKIELAEKYFEE 186
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
M KN+VTW AMI G+++ G+ LF++M +SG N +L SVL C+NL A +LG
Sbjct: 187 MPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLG 246
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
K VH+ + K+ + N G +L MY KCG +E+A ++F ++ +K+V TWN++I G A H
Sbjct: 247 KQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQH 306
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
G GE+A+ +F +M+ G+KPD +T +AVL+AC+HAG ++ G E F +M RDY VE H
Sbjct: 307 GAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDH 366
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
Y C+VDLL R L EA ++I+ MP +P++ ++G+LL AC N+ELAE A + L+
Sbjct: 367 YTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHK---NLELAEFAAKNLL 423
Query: 430 KLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGD 489
L+P + YV ++N+YAA +WD +RR MK+ ++K PG S IE+ VVHEF GD
Sbjct: 424 NLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGD 483
Query: 490 GRHPCSEEIYSMLEYVAISLREECY 514
HP I+ L + +R Y
Sbjct: 484 RIHPELAFIHEKLNELERKMRLAGY 508
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 134/314 (42%), Gaps = 65/314 (20%)
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
+S + S R+IT + GD+ SA +F+ MT K VTW +M+ G+ N R I + R+
Sbjct: 2 SSNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGY---SNRRGKIKVARQ 58
Query: 221 MRDSGVEVNELTLVSVLSAC----ANLGASEL----------GKW---VHEFVNKNCI-- 261
+ D E + + +++ AC A++ ++ L W + F +
Sbjct: 59 LFDRIPEPDIFSY-NIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQ 117
Query: 262 ---------ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA----- 307
+ N A+ Y + G ++ A ++F++ ++V W ++I G
Sbjct: 118 ARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKI 177
Query: 308 -------------------------IHGC-GEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
I C E +K+F +M SG +P+ +L +VL C
Sbjct: 178 ELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGC 237
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
S+ ++ GK++ + + V N+ L+ + C+ L++A+++ MP + + V
Sbjct: 238 SNLSALKLGKQV-HQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMP-QKDVVT 295
Query: 402 WGSLLTACASADDG 415
W ++++ A G
Sbjct: 296 WNAMISGYAQHGAG 309
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/431 (36%), Positives = 256/431 (59%), Gaps = 7/431 (1%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
F + ++ ++ +I GYA++G + ++L++ M +G+ P FT+ ++ AC DL
Sbjct: 266 TFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGA 325
Query: 147 V---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
K VH ++K F S I+ +T L+ Y + A+ FD + E ++V WT+MI
Sbjct: 326 AWEGKQVHDYLLK-LGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIG 384
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
G+V+ + + L+ +M G+ NELT+ SVL AC++L A E GK +H K L
Sbjct: 385 GYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGL 444
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+G+AL+ MYAKCG +++ VF+ + ++V +WN++I GL+ +GCG+EA+++F +MQ
Sbjct: 445 EVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQ 504
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
+ G KPD VT + +L+ACSH GL+E+G F M ++ ++P V+HY C+VD+L RA L
Sbjct: 505 LEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKL 564
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
EA E + ++ LW +L AC + N EL A E+L++L YVL+S
Sbjct: 565 KEAIEFTESATIDHGMCLWRIILGACRNYR---NYELGAYAGEKLMELGSQESSAYVLLS 621
Query: 444 NIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
+IY+A +W+D ++RR+MK R + K PGCS IE+ VH F+V D HP +I+ L
Sbjct: 622 SIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELR 681
Query: 504 YVAISLREECY 514
++ +++E Y
Sbjct: 682 QLSKQMKDEGY 692
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 197/395 (49%), Gaps = 24/395 (6%)
Query: 20 SHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSS 79
S+++ TA + H LQK K +HAQIIK+S I+++ L+
Sbjct: 5 SNRSFFTALLQYTHNRSLQKG------KALHAQIIKSSSSCVYIANS----LVNLYAKCQ 54
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRG--IQLYTQMIGNGLDPDSFTYPIL 137
++ A VF +I N ++N +I GY++ G ++L+ +M P++ T+ +
Sbjct: 55 RLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGV 114
Query: 138 LKACGDLRQVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
A L G H++ +K V + L+ YC G A+ +FD M E+N
Sbjct: 115 FTAASTLVDAAGGRLAHAVAIKMDSCRDVFVG-SSLMNMYCKAGLTPEARKVFDTMPERN 173
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL---GKW 251
V+W MI+G+ QK E + LFR MR NE SVLSA L EL GK
Sbjct: 174 SVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSA---LTLPELVNNGKQ 230
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+H KN ++ +G AL MYAKCG +++AL+ F+ +KN TW+++I G A G
Sbjct: 231 IHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGD 290
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
++A+K+F M +SGI+P + T + V+ ACS G +GK++ ++ E +
Sbjct: 291 SDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQV-HDYLLKLGFESQIYVMT 349
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
LVD+ + + +A + + EP+ VLW S++
Sbjct: 350 ALVDMYAKCSSIVDARKGFDYL-QEPDIVLWTSMI 383
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 92/225 (40%), Gaps = 20/225 (8%)
Query: 36 LLQKCTHLV---QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L+ C+ L Q KQ+HA+ +K F + L+ + + LVF ++
Sbjct: 417 VLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTM---YAKCGCLKDGTLVFRRMP 473
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---G 149
++N +I G ++ G G ++L+ +M G PD T+ +L AC + V+ G
Sbjct: 474 ARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWG 533
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMINGHVKQ 208
++ + + ++ G +K A + T + + W ++
Sbjct: 534 YFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNY 593
Query: 209 KNYREGIDLFRKMRDSGVEVNE--LTLVSVLSACANLGASELGKW 251
+NY G K+ + G + + + L S+ SA LG+W
Sbjct: 594 RNYELGAYAGEKLMELGSQESSAYVLLSSIYSA--------LGRW 630
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 173/468 (36%), Positives = 257/468 (54%), Gaps = 38/468 (8%)
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ- 146
NQ + +T ++ + I G + ++ M +G++P+ T+ LL CGD
Sbjct: 19 LNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSG 78
Query: 147 ---------------------------VKGVHSL---VVKSK---DFNSVIHSLT--RLI 171
+ G++S V K++ D+ I+S+T +I
Sbjct: 79 SETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMI 138
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
Y G V +A +FD+M E+++++WTAMING VK+ + E + FR+M+ SGV + +
Sbjct: 139 DGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYV 198
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
+++ L+AC NLGA G WVH +V N ++ +L D+Y +CG +E A VF +
Sbjct: 199 AIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKM 258
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
++ V +WNS+I G A +G E++ F +MQ G KPD VT LTACSH GL+E+G
Sbjct: 259 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGL 318
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
F M+RDY + P ++HYGCLVDL RA L++A +VI +MPM+PN V+ GSLL AC +
Sbjct: 319 RYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVIGSLLAACRT 378
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
G N LAE M+ L L + NYV++SN+YAA +W+ A +MRR MK + K P
Sbjct: 379 --HGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQP 436
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARMP 519
G S IEI+D H FM GD H + I +LE V+ LR + P
Sbjct: 437 GFSSIEIDDCTHVFMAGDSAHVETAIIREVLELVSSDLRLQGCVVETP 484
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 46/274 (16%)
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
N+G K +L +Q T + V+WT+ I + E F MR SGVE N +T ++
Sbjct: 10 NYGXPKIQRL--NQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIA 67
Query: 236 VLSACANL--GASELGKWVHEFVNKNCIILNDK----LGAALTDMYAKCGYIEEALRVFK 289
+LS C + G+ L +H + C + D+ +G A+ MY+K G++++A VF
Sbjct: 68 LLSGCGDFPSGSETLSNLLHGYA---CKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFD 124
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMF----------W------------------- 320
+ + N TWN++I G G + AVKMF W
Sbjct: 125 YMEDINSVTWNTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVW 184
Query: 321 --QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLL 377
+MQ+SG++PD V +IA L AC++ G + G + Y M +D+K NV+ L+DL
Sbjct: 185 FREMQISGVRPDYVAIIAALNACTNLGALSFGLWVHRYVMNQDFK--NNVRVSNSLIDLY 242
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
CR ++ A EV M + V W S++ A+
Sbjct: 243 CRCGCVEFAREVFDKME-KRTVVSWNSVIVGFAA 275
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 131/270 (48%), Gaps = 7/270 (2%)
Query: 47 KQVHAQIIKASFDN-RTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
K+ H + + FD I+ +I+ + S Q+ A +F+++ ++ +I G
Sbjct: 112 KRGHVKKARLVFDYMEDINSVTWNTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMING 171
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNS 162
+ + G + + +M +G+ PD L AC +L + VH V+ ++DF +
Sbjct: 172 FVKKGFHEEALVWFREMQISGVRPDYVAIIAALNACTNLGALSFGLWVHRYVM-NQDFKN 230
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ LI YC G V+ A+ +FD+M ++ VV+W ++I G N E + FRKM+
Sbjct: 231 NVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQ 290
Query: 223 DSGVEVNELTLVSVLSACANLGASELG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
+ G + + +T L+AC+++G E G ++ I + L D+Y++ G +
Sbjct: 291 EEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRL 350
Query: 282 EEALRVFK-IVLEKNVCTWNSIIGGLAIHG 310
E+AL+V + + ++ N S++ HG
Sbjct: 351 EDALKVIESMPMKPNEVVIGSLLAACRTHG 380
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 11/164 (6%)
Query: 37 LQKCTHLVQFK---QVHAQIIKASFDNRT-ISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
L CT+L VH ++ F N +S++ LI+ + +A VF+++
Sbjct: 204 LNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNS----LIDLYCRCGCVEFAREVFDKME 259
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-KGVH 151
+ ++N+VI G+A G H + + +M G PD+ T+ L AC + V +G+
Sbjct: 260 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLR 319
Query: 152 SLVVKSKDF--NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
+D+ + I L+ Y G ++ A + + M K
Sbjct: 320 YFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMK 363
>gi|242037745|ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/471 (35%), Positives = 261/471 (55%), Gaps = 53/471 (11%)
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD------------ 130
+A +F+++ +P + R +A +G + + ++ M+ +G+ PD
Sbjct: 65 HARDLFDEMPDPGLVTRTAMARAHAASGQTAQALAVFGDMLADGVLPDNVALAVALAACH 124
Query: 131 -SFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
+ ++P L R K VH+L+V S V S T LI Y +G++ ++ LFD
Sbjct: 125 GTGSFPAALGMAAARRPGKMVHALIVTSGIVPDVFVS-TELIRLYGEYGELLVSRRLFDA 183
Query: 190 MTEKNVVTWTAMINGHVKQKN-------------------------------YREGIDLF 218
M K+ V+W AM++ +++ N + E ++LF
Sbjct: 184 MPVKSTVSWNAMVHQYIRHSNVGDAYELFLAMPKRDVVSWNTIIAGYCLIGRFMEALELF 243
Query: 219 RKMRDSG---VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
R+M V N T+ +VL+ACA G E G WVH ++++N + + L +L DMY
Sbjct: 244 RQMMSPSSCPVHPNGPTISTVLAACAGAGCLETGIWVHAYIDRNRMNDDGSLDRSLIDMY 303
Query: 276 AKCGYIEEALRVF-KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
AKCG IE+AL+VF K ++++ +W ++I GLA+HG +A++MF MQ +GI+PDDVTL
Sbjct: 304 AKCGSIEKALQVFEKAPGKRDLYSWTTVICGLAMHGKAADALRMFGMMQDNGIRPDDVTL 363
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+ VL AC+H GL+++G FY++ + Y + P ++HYGC++DLL R L EAY +IR M
Sbjct: 364 VGVLNACAHGGLVDEGLHHFYSLEK-YAITPKIEHYGCVIDLLGRVGRLQEAYSIIRTMR 422
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
M+PNAV+WG+ L AC +NVEL EIA L +L+P + V++S++YA W
Sbjct: 423 MKPNAVIWGAFLNACKVH---SNVELGEIAAAELTRLDPDDPWAKVMLSSLYAKAQDWSS 479
Query: 455 AGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
+ RR M + K PGCS IE++ VHEF+ G +HP EI ++LE V
Sbjct: 480 LARERREMNSLQMKKTPGCSSIELDGEVHEFVAGSFQHPQHGEICTVLENV 530
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 139/336 (41%), Gaps = 60/336 (17%)
Query: 134 YPILLKACGDLRQVK---------------GVHSLVVKSKDFNSVIHSLTRLITFYCNFG 178
+P+ L + LR +K +H L+ K ++ H T L++ Y G
Sbjct: 2 HPLTLSSTALLRLIKSLSPAAGPRAHLAAAAIHGLLFKEGLLHAGSHLPTALLSAYAALG 61
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
+ A+ LFD+M + +VT TAM H + + +F M GV + + L L+
Sbjct: 62 RPRHARDLFDEMPDPGLVTRTAMARAHAASGQTAQALAVFGDMLADGVLPDNVALAVALA 121
Query: 239 ACANLG----------ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG--------- 279
AC G A GK VH + + I+ + + L +Y + G
Sbjct: 122 ACHGTGSFPAALGMAAARRPGKMVHALIVTSGIVPDVFVSTELIRLYGEYGELLVSRRLF 181
Query: 280 -----------------YIE-----EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
YI +A +F + +++V +WN+II G + G EA++
Sbjct: 182 DAMPVKSTVSWNAMVHQYIRHSNVGDAYELFLAMPKRDVVSWNTIIAGYCLIGRFMEALE 241
Query: 318 MFWQMQMSG---IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
+F QM + P+ T+ VL AC+ AG +E G + + R+ ++ + L+
Sbjct: 242 LFRQMMSPSSCPVHPNGPTISTVLAACAGAGCLETGIWVHAYIDRN-RMNDDGSLDRSLI 300
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
D+ + +++A +V P + + W +++ A
Sbjct: 301 DMYAKCGSIEKALQVFEKAPGKRDLYSWTTVICGLA 336
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 135/290 (46%), Gaps = 26/290 (8%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD + T ++ + S + A+ +F + ++NT+I GY G +
Sbjct: 181 FDAMPVKSTVSWNAMVHQYIRHSNVGDAYELFLAMPKRDVVSWNTIIAGYCLIGRFMEAL 240
Query: 117 QLYTQMIGNG---LDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSK--DFNSVIHSLT 168
+L+ QM+ + P+ T +L AC G L VH+ + +++ D S+ S
Sbjct: 241 ELFRQMMSPSSCPVHPNGPTISTVLAACAGAGCLETGIWVHAYIDRNRMNDDGSLDRS-- 298
Query: 169 RLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
LI Y G ++ A +F++ ++++ +WT +I G + + +F M+D+G+
Sbjct: 299 -LIDMYAKCGSIEKALQVFEKAPGKRDLYSWTTVICGLAMHGKAADALRMFGMMQDNGIR 357
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG--AALTDMYAKCGYIEEAL 285
+++TLV VL+ACA+ G + G +H F + + K+ + D+ + G ++EA
Sbjct: 358 PDDVTLVGVLNACAHGGLVDEG--LHHFYSLEKYAITPKIEHYGCVIDLLGRVGRLQEAY 415
Query: 286 RVFKIV-LEKNVCTWNSIIGGLAIHG---CGEEAVKMFWQMQMSGIKPDD 331
+ + + ++ N W + + +H GE A +++ + PDD
Sbjct: 416 SIIRTMRMKPNAVIWGAFLNACKVHSNVELGEIAAA-----ELTRLDPDD 460
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/419 (38%), Positives = 254/419 (60%), Gaps = 39/419 (9%)
Query: 122 MIGNGLDPDSFTYPILLKACGDL-RQVKGV--HSLVVKS----KDF--NSVIH------- 165
M+ G+ PD TYP L KA L R+ GV H V+KS F NS+IH
Sbjct: 1 MLQVGIYPDHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCGD 60
Query: 166 -----------------SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
S ++ Y G + A+ LFD M E++V +W+ +I+G+ K
Sbjct: 61 IVYARKVFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKS 120
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
NY + + +F KMR SG + NE+T+VSVL ACA+LGA + G+ +H+++ N LN L
Sbjct: 121 GNYGDAMAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLR 180
Query: 269 AALTDMYAKCGYIEEALRVFKIV--LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+L DMYAKCG +EEA VF+ V + +V WN++IGGLA HG +E++ ++ +MQ++G
Sbjct: 181 TSLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIAG 240
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
IKPD++T + +L+AC+H GL+++ +F + ++ + P +HY C+VD++ RA + EA
Sbjct: 241 IKPDEITFLCLLSACAHGGLVKQASYVFEGLGKN-GMTPKTEHYACMVDVMARAGQVAEA 299
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
Y+ + MP+EP A + G+LL+ C + ++LAE+ ++LI+L+P +DG YV +SN+Y
Sbjct: 300 YQFLCQMPLEPTASMLGALLSGCMNH---GKLDLAELIGKKLIELDPEHDGRYVGLSNVY 356
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
A +WD+A MR M+ R + K PG S +E++ H F+ D HP SE+IY+ML ++
Sbjct: 357 AIGRRWDEARIMREAMERRGVKKTPGYSFLEMSGAHHRFIAHDKSHPSSEQIYTMLSFI 415
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 146/323 (45%), Gaps = 49/323 (15%)
Query: 31 HHHLPLLQKCTHLVQFKQ----VHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIAYAH 85
H P L K T + K+ +H +IK+ F+ +R ++++ LI + I YA
Sbjct: 10 HLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANS----LIHMYGSCGDIVYAR 65
Query: 86 LVFNQIINPSTFAFNT-------------------------------VIRGYAEAGLGHR 114
VF+ + ++N+ +I GYA++G
Sbjct: 66 KVFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGNYGD 125
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSK-DFNSVIHSLTRL 170
+ ++ +M +G + T +L AC G L + + +H +V + + N V+ T L
Sbjct: 126 AMAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLR--TSL 183
Query: 171 ITFYCNFGDVKSAQLLFD--QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV 228
I Y G V+ A +F + + +V+ W AMI G +E +DL+ +M+ +G++
Sbjct: 184 IDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIAGIKP 243
Query: 229 NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
+E+T + +LSACA+ G + +V E + KN + + A + D+ A+ G + EA +
Sbjct: 244 DEITFLCLLSACAHGGLVKQASYVFEGLGKNGMTPKTEHYACMVDVMARAGQVAEAYQFL 303
Query: 289 -KIVLEKNVCTWNSIIGGLAIHG 310
++ LE +++ G HG
Sbjct: 304 CQMPLEPTASMLGALLSGCMNHG 326
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 176/516 (34%), Positives = 289/516 (56%), Gaps = 43/516 (8%)
Query: 34 LPLLQKCTHLV--QFKQVHAQIIKASFDNRT-ISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
L LLQ+ +L Q KQ+HA I + + IS LA S YA +F
Sbjct: 26 LHLLQQWQNLTMKQTKQIHAHAIANNLTRFSYISSRILAFFAAS--PRGDFRYAETLFTH 83
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGV 150
+ NP+ F +N++I Y + + ++T+M+ + P+S T+ L+K+C L ++ V
Sbjct: 84 MPNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVTLSSLEQV 143
Query: 151 HSLVVKSKDFNSV---------------IH---------------SLTRLITFYCNFGDV 180
+L +KS + + V IH T L++ YC+ G V
Sbjct: 144 FTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLV 203
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR--KMRDSG---VEVNELTLVS 235
+ +FD+M ++N + +AM++G+V+ + EG+ LFR K +D G V+ N LVS
Sbjct: 204 NEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVS 263
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
VL+AC +GA E GKW+H +V +N + + +LG AL D YAKCG++++A +VF +L K+
Sbjct: 264 VLNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKD 323
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
V TW+++I GLAI+G + A+++F +M+ G KP++VT + VLTAC+H L + +F
Sbjct: 324 VATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFG 383
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
M Y + P+++HYGC+VD+L R+ + +A I +M +EP+ +WGSLL C
Sbjct: 384 IMSEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMH--- 440
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
+ EL + + LI+ +P + G YVL++N+YA +W+ ++R+LMK+R +V G S
Sbjct: 441 GHYELGQKVGKYLIEFDPEHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVVIVYGWSF 500
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
IEI+ +H+F D S EIY +L ++ + E
Sbjct: 501 IEIDQTLHKFSADDKCCLYSGEIYEVLSHLGKKVEE 536
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/474 (35%), Positives = 268/474 (56%), Gaps = 14/474 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
+Q+H II++ D L LI + + A+ VF+ + + + ++ +I G
Sbjct: 607 RQIHMLIIESGLQ----LDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGG 662
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSK-DFN 161
+A+ G + +L+ QM +G P T+ +LKAC L + K V + ++ S + +
Sbjct: 663 FADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELD 722
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
+ + + LI+ Y G + A+ +FD+M +++++W MI G+ + + +M
Sbjct: 723 TGVGNA--LISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQM 780
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
++ GV +N+ + VS+L+AC++ A E GK VH + K + + ++GAAL MYAKCG +
Sbjct: 781 QEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSL 840
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
EEA VF EKNV TWN++I A HG +A+ F M GIKPD T ++L+AC
Sbjct: 841 EEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSAC 900
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
+H+GL+ +G IF ++ + + P ++HYGCLV LL RA EA +I MP P+A +
Sbjct: 901 NHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAV 960
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
W +LL AC NV LAE A +KL N YVL+SN+YAA +WDD K+RR+
Sbjct: 961 WETLLGACRIH---GNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRV 1017
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYA 515
M+ R I K PG S IE+++++HEF+ D HP + EIY L+ +++ + Y+
Sbjct: 1018 MEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYS 1071
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 189/378 (50%), Gaps = 10/378 (2%)
Query: 64 SDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
SD Q+ LI + A +FN + ++N +I GYA ++LY QM
Sbjct: 418 SDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQM 477
Query: 123 IGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
G+ P T+ LL AC + K +H +++S S H L+ Y G
Sbjct: 478 QSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCGS 536
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
+ AQ +F+ +++++W +MI GH + +Y LF +M+ G+E +++T SVL
Sbjct: 537 IMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVG 596
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
C N A ELG+ +H + ++ + L+ LG AL +MY +CG +++A VF + +NV +W
Sbjct: 597 CKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSW 656
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN-MR 358
++IGG A G +A ++FWQMQ G KP T ++L AC + +++GK++ + +
Sbjct: 657 TAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILN 716
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD-DGAN 417
Y+++ V + L+ ++ + +A +V MP + + W ++ A G
Sbjct: 717 SGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMP-NRDIMSWNKMIAGYAQNGLGGTA 773
Query: 418 VELAEIAMERLIKLEPFN 435
++ A E+ + L F+
Sbjct: 774 LQFAYQMQEQGVVLNKFS 791
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 195/384 (50%), Gaps = 11/384 (2%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
L + K++H + ++ T LA + V +A A + +N +
Sbjct: 300 LDEGKRIHKLAVNEGLNSDIRVGTALATM---FVRCGDVAGAKQALEAFADRDVVVYNAL 356
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLV---VKSKD 159
I A+ G + Y QM +G+ + TY +L AC + + G L+ +
Sbjct: 357 IAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKAL-GAGELIHSHISEVG 415
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
+S + LI+ Y GD+ A+ LF+ M ++++++W A+I G+ ++++ E + L++
Sbjct: 416 HSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYK 475
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
+M+ GV+ +T + +LSAC N A GK +HE + ++ I N L AL +MY +CG
Sbjct: 476 QMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCG 535
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
I EA VF+ +++ +WNS+I G A HG E A K+F +M+ G++PD +T +VL
Sbjct: 536 SIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLV 595
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
C + +E G++I + + + ++ +V L+++ R L +AYEV ++ N
Sbjct: 596 GCKNPEALELGRQI-HMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSL-RHRNV 653
Query: 400 VLWGSLLTACASADDGANVELAEI 423
+ W +++ AD G + + E+
Sbjct: 654 MSWTAMIGGF--ADQGEDRKAFEL 675
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 200/404 (49%), Gaps = 14/404 (3%)
Query: 18 ANSHKNSNTATKSHHHLPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKL-IE 73
+N+++ T T ++ L+Q CT L + K++HAQ+++A D L+ L I
Sbjct: 70 SNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVG----PDIFLSNLLIN 125
Query: 74 SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFT 133
V ++ AH VF ++ ++N++I YA+ G + QL+ +M G P T
Sbjct: 126 MYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKIT 185
Query: 134 YPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
Y +L AC +L K +HS ++++ + L+ Y D+ SA+ +F +
Sbjct: 186 YISILTACCSPAELEYGKKIHSKIIEA-GYQRDPRVQNSLLNMYGKCEDLPSARQVFSGI 244
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
++VV++ M+ + ++ E I LF +M G+ +++T +++L A + GK
Sbjct: 245 YRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGK 304
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
+H+ + + ++G AL M+ +CG + A + + +++V +N++I LA HG
Sbjct: 305 RIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHG 364
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
EEA + ++QM+ G+ + T ++VL ACS + + G E+ ++ + +V+
Sbjct: 365 HYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAG-ELIHSHISEVGHSSDVQIG 423
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
L+ + R L A E+ MP + + + W +++ A +D
Sbjct: 424 NSLISMYARCGDLPRARELFNTMP-KRDLISWNAIIAGYARRED 466
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 279/488 (57%), Gaps = 15/488 (3%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L CT L KQ+H+++I+ L + + + VF Q+
Sbjct: 255 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 314
Query: 93 NPSTFAFNTVIRGYAEAG-LGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---K 148
+ ++ +I Y ++G I+L+ +MI + P+ F++ +LKACG+L +
Sbjct: 315 EHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 374
Query: 149 GVHSLVVK--SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
V+S VK N V +SL I+ Y G ++ A+ FD + EKN+V++ A+++G+
Sbjct: 375 QVYSYAVKLGIASVNCVGNSL---ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 431
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
K E LF ++ D+G+ ++ T S+LS A++GA G+ +H + K N
Sbjct: 432 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 491
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+ AL MY++CG IE A +VF + ++NV +W S+I G A HG A++MF +M +G
Sbjct: 492 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 551
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
KP+++T +AVL+ACSH G+I +G++ F +M +++ + P ++HY C+VDLL R+ LL EA
Sbjct: 552 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 611
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
E I +MP+ +A++W +LL AC N EL A E +++ EP + Y+L+SN++
Sbjct: 612 MEFINSMPLMADALVWRTLLGACRVH---GNTELGRHAAEMILEQEPDDPAAYILLSNLH 668
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
A+ QW D K+R+ MKERN++K GCS IE+ + VH F VG+ HP + +IY L+ +A
Sbjct: 669 ASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLA 728
Query: 507 ISLREECY 514
++E Y
Sbjct: 729 SKIKEMGY 736
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 190/391 (48%), Gaps = 25/391 (6%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL+ C F K VH +++++ + + L LI A L+F +
Sbjct: 50 LLKSCIRFRNFQLGKLVHRKLMQSGLE---LDSVVLNTLISLYSKCGDTETARLIFEGMG 106
Query: 93 NPSTF-AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---K 148
N +++ ++ +A + + I + M+ G P+ + + +++AC + +
Sbjct: 107 NKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGE 166
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYC-NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
++ VVK+ + + LI + GD+ SA +FD+M E+N+VTWT MI +
Sbjct: 167 IIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQ 226
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
R+ IDLF M SG + T SVLSAC LG LGK +H V + + L+ +
Sbjct: 227 LGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCV 286
Query: 268 GAALTDMYAKC---GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG-CGEEAVKMFWQMQ 323
G +L DMYAKC G ++++ +VF+ + E NV +W +II G C +EA+++F +M
Sbjct: 287 GCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMI 346
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC----LVDLLCR 379
I+P+ + +VL AC + G++++ Y V+ + C L+ + R
Sbjct: 347 SGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-----SYAVKLGIASVNCVGNSLISMYAR 401
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ +++A + ++ E N V + +++ A
Sbjct: 402 SGRMEDARKAF-DILFEKNLVSYNAIVDGYA 431
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 165/321 (51%), Gaps = 19/321 (5%)
Query: 100 NTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVK 156
N +IR + G H M PD TY ILLK+C R K VH +++
Sbjct: 14 NRLIRQL-DVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQ 72
Query: 157 SK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK-NVVTWTAMINGHVKQKNYREG 214
S + +SV+ L LI+ Y GD ++A+L+F+ M K ++V+W+AM++ +
Sbjct: 73 SGLELDSVV--LNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQA 130
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK-LGAALTD 273
I F M + G NE +V+ AC+N + +G+ ++ FV K + D +G L D
Sbjct: 131 IWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELID 190
Query: 274 MYAK-CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
M+ K G + A +VF + E+N+ TW +I A GC +A+ +F M++SG PD
Sbjct: 191 MFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRF 250
Query: 333 TLIAVLTACSHAGLIEKGKEIFYN-MRRDYKVEPNVKHYGC-LVDLLCRARL---LDEAY 387
T +VL+AC+ GL+ GK++ +R ++ V GC LVD+ + +D++
Sbjct: 251 TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCV---GCSLVDMYAKCAADGSVDDSR 307
Query: 388 EVIRNMPMEPNAVLWGSLLTA 408
+V MP E N + W +++TA
Sbjct: 308 KVFEQMP-EHNVMSWTAIITA 327
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 123/266 (46%), Gaps = 48/266 (18%)
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN----VVTWTAMINGHVK 207
SL +K+ +F + + L R + + G + A D MT++N + T++ ++ ++
Sbjct: 1 SLSLKNPNFEPLKNRLIRQL----DVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIR 56
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
+N++ G + RK+ SG+E++ + L +++S
Sbjct: 57 FRNFQLGKLVHRKLMQSGLELDSVVLNTLIS----------------------------- 87
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEK-NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+Y+KCG E A +F+ + K ++ +W++++ A + +A+ F M G
Sbjct: 88 ------LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 141
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC-LVDLLCRARL-LD 384
P++ AV+ ACS+A G+ I+ + + +E +V GC L+D+ + L
Sbjct: 142 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVC-VGCELIDMFVKGSGDLG 200
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTACA 410
AY+V MP E N V W ++T A
Sbjct: 201 SAYKVFDKMP-ERNLVTWTLMITRFA 225
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 260/446 (58%), Gaps = 18/446 (4%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM-IGNGLDP 129
++ V + + A +F ++ ++N ++ GYA+ G +++ +M + NG+
Sbjct: 32 MLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMPLKNGI-- 89
Query: 130 DSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD-VKSAQLLFD 188
++ LL A +++ L D+ L+++ C G V+ + LFD
Sbjct: 90 ---SWNGLLAAYVQNGRIEDAKRLFESKMDWT--------LVSWNCLMGGFVRKRRNLFD 138
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
M +++ ++W+AMI G+ + E + F +M+ +N + LS C+N+ A EL
Sbjct: 139 NMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALEL 198
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G+ +H + K +G AL MY KCG I+EA F+ +LEK+V +WN++I G A
Sbjct: 199 GRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYAR 258
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
HG GEEA+ +F M+ +GI+PDD T+++VL ACSHAGL+++G E FY+M RDY + +
Sbjct: 259 HGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLV 318
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HY C+VDLL RA L+EA +++NMP EP+A WG+LL A + N EL E A + +
Sbjct: 319 HYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGA---SRIHGNTELGEKAAQII 375
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
++EP N G Y+L+S +YAA +W DAGKMR M+ + + K PG S +E+ + +H F VG
Sbjct: 376 FEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVG 435
Query: 489 DGRHPCSEEIYSMLEYVAISLREECY 514
D HP +++IY+ LE + + L++E Y
Sbjct: 436 DTSHPHTDKIYTFLEEMDLKLKQEGY 461
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 120/256 (46%), Gaps = 40/256 (15%)
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A+ LFD+M E+++ +W M+ G+V+ ++ + LF +M + + ++ ++LS A
Sbjct: 14 ARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDI----VSWNAMLSGYAQ 69
Query: 243 LG-ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
G E + ++ KN I N L A Y + G IE+A R+F+ ++ + +WN
Sbjct: 70 NGFVDEAREIFYKMPLKNGISWNGLLAA-----YVQNGRIEDAKRLFESKMDWTLVSWNC 124
Query: 302 IIGGL--------------------------AIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
++GG + +GC EEA+ F +MQ + + +
Sbjct: 125 LMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFT 184
Query: 336 AVLTACSHAGLIEKGKEIFYNM-RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
L+ CS+ +E G+++ + + Y+ V + L+ + C+ +DEA + + +
Sbjct: 185 CALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGN--ALLAMYCKCGSIDEARDAFQEI- 241
Query: 395 MEPNAVLWGSLLTACA 410
+E + V W +++ A
Sbjct: 242 LEKDVVSWNTMIHGYA 257
>gi|91806359|gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 281/479 (58%), Gaps = 36/479 (7%)
Query: 48 QVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
Q+H+QI + F +D ++ +++ ++ A F+++ + S ++ +I GY
Sbjct: 99 QLHSQIWRFGF----CADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGY 154
Query: 107 AEAGLGHRGIQLYTQMIGNGLDP---DSFTYPILLKA---CGDLRQVKGVHSLVVKSKDF 160
G +L+ QM P D Y ++ GD+ + + F
Sbjct: 155 IRCGELDLASKLFDQM------PHVKDVVIYNAMMDGFVKSGDMTSARRL---------F 199
Query: 161 NSVIH----SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID 216
+ + H + T +I YCN D+ +A+ LFD M E+N+V+W MI G+ + K +EGI
Sbjct: 200 DEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIT 259
Query: 217 LFRKMR-DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
LF++M+ + ++ +++T++SVL A ++ GA LG+W H FV + + K+ A+ DMY
Sbjct: 260 LFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMY 319
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
+KCG IE+A R+F + EK V +WN++I G A++G A+ +F M + KPD++T++
Sbjct: 320 SKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITML 378
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
AV+TAC+H GL+E+G++ F+ MR + + ++HYGC+VDLL RA L EA ++I NMP
Sbjct: 379 AVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPF 437
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
EPN ++ S L+AC D +E AE +++ ++LEP NDGNYVL+ N+YAA +WDD
Sbjct: 438 EPNGIILSSFLSACGQYKD---IERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDF 494
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
G ++ +M++ K GCS+IEIN +V EF+ GD HP I+ +L + + + EE Y
Sbjct: 495 GMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 177/485 (36%), Positives = 277/485 (57%), Gaps = 16/485 (3%)
Query: 36 LLQKCTHLVQFKQVHAQIIKAS--FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQII 92
LQ C L+ F +++AS FD D+ +I+ V +I A +VF+ I
Sbjct: 163 FLQNC--LISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIP 220
Query: 93 --NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGV 150
+ ++N++IRGYA++ GI + Q+ + D ++ ++ C +++
Sbjct: 221 LEERNLISWNSLIRGYAQS---EDGILVAWQLFAKMPERDLISWNSMIDGCVKCGRMEDA 277
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
L + N I S +I Y G V A+ LFD+M E++VV + AM+ G+V+
Sbjct: 278 QGLFDRMP--NRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGY 335
Query: 211 YREGIDLFRKMRDSG-VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E + +F M+ G ++ TL+ LSA A LG + G +H F+ + L+ +LG
Sbjct: 336 CMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGV 395
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMY+KCG IE A+ VF+ + EK+V WN+IIGGLAIHG GE A +M+ ++P
Sbjct: 396 ALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEP 455
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
DD+T I +L AC HAGL+++G F MRR +KVEP ++HYGC+VD+L RA ++EA
Sbjct: 456 DDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNF 515
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
+ MP EPN V+W SLL+AC + + + + + E L++L+ + +YVL SN+YA
Sbjct: 516 VEEMPFEPNDVIWRSLLSACKTHE---SFNVGQPVAENLMRLDSPSPSSYVLASNMYAGL 572
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+W+D K+R +MK++N+ K PGCS IE+ V+ F V D HP IYS+L+ ++++
Sbjct: 573 GKWNDVRKVRAMMKQKNLKKIPGCSWIELEGHVYAFFVQDKSHPQFSGIYSILDSLSMTD 632
Query: 510 REECY 514
E Y
Sbjct: 633 SEHSY 637
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 208/479 (43%), Gaps = 85/479 (17%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ--- 90
L LL+KC L Q+HA+++ F T T++ + +++ I +A +F +
Sbjct: 19 LVLLKKCKRLSDINQIHARLLTTGFIKNTFLTTKIILSFSTSLHAPLIEFARFIFFRHHA 78
Query: 91 --------IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG 142
F +N +I+ Y+ + L + M+ NG D FT ++LKAC
Sbjct: 79 FEFDEKEEEEEKDPFLWNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKACS 138
Query: 143 DLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
+ VK +H L+ K +F S + LI+FY G + A +FD+M +++ V++
Sbjct: 139 RVGLVKEGMQIHGLL-KKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYN 197
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV------- 252
+MI+G+VK IDL R + D + + E L+S S SE G V
Sbjct: 198 SMIDGYVKGGR----IDLARVVFDC-IPLEERNLISWNSLIRGYAQSEDGILVAWQLFAK 252
Query: 253 ---HEFVNKNCII--------LNDKLG-------------AALTDMYAKCGYIEEALRVF 288
+ ++ N +I + D G A + D YAK G ++ A +F
Sbjct: 253 MPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLF 312
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLI 347
+ E++V +N+++GG +G EA+ +F+ MQ G D+ TL+ L+A + G I
Sbjct: 313 DEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHI 372
Query: 348 EKG-------KEIFYNMRRDYKV-----------------------EPNVKHYGCLVDLL 377
+KG +EI +++ V E +V H+ ++ L
Sbjct: 373 DKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGL 432
Query: 378 CRARLLDEAYEVI---RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
L + A++ + M +EP+ + + LL AC A + M R+ K+EP
Sbjct: 433 AIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEP 491
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/483 (36%), Positives = 264/483 (54%), Gaps = 17/483 (3%)
Query: 39 KCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFA 98
+C+ L + HAQIIK + DN + L+ + A L+ + N S
Sbjct: 20 QCSRLG--RAAHAQIIK-TLDN-PLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVT 75
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVV 155
+ +I G + G + ++ M + + P+ FT+P KA G LR K VH+L V
Sbjct: 76 WTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAV 135
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
K+ + V + Y G + A+ +FD+M E+N+ TW A ++ V + Y + +
Sbjct: 136 KAGQISDVFVGCSAF-DMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDAL 194
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
F + R G+E + + SVLSACA L E+GK VH K C++ N +G+AL DMY
Sbjct: 195 TAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMY 254
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG--IKPDDVT 333
KCG IE+A R F + E+N+ TWN++IGG A G + AV +F +M + P+ VT
Sbjct: 255 GKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVT 314
Query: 334 LIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
+ VL+ACS AG + G EIF +MR Y +EP +HY C+VDLL RA ++++AY+ I+ M
Sbjct: 315 FVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKM 374
Query: 394 PMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWD 453
P+ P +WG+LL A + EL ++A + L +L+P + GN+VL+SN++AA +W+
Sbjct: 375 PIRPTVSVWGALLGA---SKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWE 431
Query: 454 DAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREEC 513
+A +R+ MK+ I K GCS I + VH F D H + EI +ML LR E
Sbjct: 432 EATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLA----KLRGEM 487
Query: 514 YAA 516
AA
Sbjct: 488 EAA 490
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 277/470 (58%), Gaps = 12/470 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
Q+H +K+ F+ ++ I+ +I A VFN++ + ++N +I G+
Sbjct: 126 QIHGMCVKSGFEWVSVVGN---ATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHT 182
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVI 164
G G + + L+ +M G G PD FT+ LKACG L ++G +H+ ++ ++ F I
Sbjct: 183 HEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLI-TRGFPISI 241
Query: 165 HSL--TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
++ + ++ Y G + AQ +FD++ +KN+++W+A+I G ++ N E +DLFR++R
Sbjct: 242 RNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLR 301
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+S V+ L ++ A+L E GK +H ++ K L+ + ++ DMY KCG E
Sbjct: 302 ESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTE 361
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
EA R+F + +NV +W +I G HG GE+A+ +F +MQ+ GI+ D+V +A+L+ACS
Sbjct: 362 EAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACS 421
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
H+GLI + +E F + +++++PN++HY C+VD+L RA L EA +I NM ++PN +W
Sbjct: 422 HSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIW 481
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
+LL+AC N+E+ E L +++ N NYV+MSNIYA W + ++R+L+
Sbjct: 482 QTLLSACRVH---GNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLV 538
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
K + + K G S +EIN +H F GD HP +E+I+ ML+ + ++EE
Sbjct: 539 KAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEE 588
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 201/384 (52%), Gaps = 18/384 (4%)
Query: 35 PLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
LL+ C+ Q QVHA + F I + L I+ S++ A VF+++
Sbjct: 9 KLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDL---IDMYGKCSRVDLACSVFDRM 65
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG-- 149
+ + ++ ++ GY + G + L +M +G+ P+ FT+ LKACG L V+
Sbjct: 66 LERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGM 125
Query: 150 -VHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+H + VKS ++ SV+ + T I Y G + A+ +F++M +N+V+W AMI GH
Sbjct: 126 QIHGMCVKSGFEWVSVVGNAT--IDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTH 183
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH-EFVNKNC-IILND 265
+ N R+ + LF++M+ G +E T S L AC LGA G +H + + I + +
Sbjct: 184 EGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRN 243
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
+ +A+ D+YAKCGY+ EA +VF + +KN+ +W+++I G A G EA+ +F Q++ S
Sbjct: 244 IIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRES 303
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
D L ++ + L+E+GK++ Y ++ ++ +V + ++D+ + L +
Sbjct: 304 VSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVAN--SIIDMYLKCGLTE 361
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTA 408
EA + M + N V W ++T
Sbjct: 362 EAERLFSEMQVR-NVVSWTVMITG 384
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 125/242 (51%), Gaps = 2/242 (0%)
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
LI Y V A +FD+M E+NVV+WTA++ G++++ N + + L +M SGV+ N
Sbjct: 45 LIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPN 104
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
E T + L AC LG E G +H K+ +G A DMY+KCG I A +VF
Sbjct: 105 EFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFN 164
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ +N+ +WN++I G G G +++ +F +MQ G PD+ T + L AC G I
Sbjct: 165 KMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRG 224
Query: 350 GKEIFYNM-RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
G +I ++ R + + +VDL + L EA +V + + N + W +L+
Sbjct: 225 GTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIE-QKNLISWSALIQG 283
Query: 409 CA 410
A
Sbjct: 284 FA 285
>gi|297827165|ref|XP_002881465.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327304|gb|EFH57724.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/490 (34%), Positives = 279/490 (56%), Gaps = 6/490 (1%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
+S+ +K H L L+ C+ + Q+H QI +S N + ++L + + SL ++ +A
Sbjct: 6 DSSFKSKKHQCLIFLKLCSSIKHLLQIHGQIHVSSLQNDSFIISELIR-VSSLSHTKDLA 64
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG 142
+A + + + +N + RGY+ + I +Y++M + P+ T+P LLKAC
Sbjct: 65 FARTLLLHSSDSTPSTWNMLTRGYSSSDTPVESIWVYSEMKRRRIKPNKLTFPFLLKACA 124
Query: 143 DLRQVKGVHSLVVK--SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
+ + V+ F+S ++ LI Y + A+ +FD+MTE+NVV+W +
Sbjct: 125 SFLGLTAGRQIQVEVLKHGFDSDVYVGNNLIHLYGSCKKTSDARKVFDEMTERNVVSWNS 184
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
++ V+ + ++ F +M +E T+V +LSAC G LGK VH V
Sbjct: 185 IMTALVENGKFNLVVECFFEMIGRQFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRE 242
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ LN +LG AL DMYAK G ++ A VF+ + +KNV TW+++I GLA +G EEA+++F
Sbjct: 243 LELNCRLGTALVDMYAKSGGLKYARLVFERMADKNVWTWSAMIVGLAQYGFAEEALQLFS 302
Query: 321 QM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
+M + S ++P+ VT + VL ACSH GL++ G + F+ M + +K++P + HYG +VD+L R
Sbjct: 303 KMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKRHKIKPMMIHYGAMVDILGR 362
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
A L+EAY+ I+ MP EP+AV+W +LL+AC+ D + + E +RLI+LEP GN
Sbjct: 363 AGRLNEAYDFIQKMPFEPDAVVWRTLLSACSIHHDEDDKGIGEKVKKRLIELEPKRSGNL 422
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
V+++N +A WD+A ++RR+MKE + K G S +E+ H+F G P IY
Sbjct: 423 VIVANRFAEARMWDEAAEVRRVMKETKMKKIAGESCLELGGSFHKFFSGYDPRPEYVSIY 482
Query: 500 SMLEYVAISL 509
+L+ L
Sbjct: 483 ELLDLFKFQL 492
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/454 (36%), Positives = 263/454 (57%), Gaps = 13/454 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K+VH I + +T L I V + + A ++F+++ + ++ T+I Y
Sbjct: 305 KRVHRHIFSNGYHPKTFLTNIL---INMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAY 361
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHS 166
+ A L R ++L M +G+ P+ FT+ +L+AC L +K +HS ++K S +
Sbjct: 362 SNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLKQLHSWIMKV-GLESDVFV 420
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
+ LI Y G++ A +F +M + V W ++I + + E + L++ MR G
Sbjct: 421 RSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGF 480
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNK--NCIILNDKLGAALTDMYAKCGYIEEA 284
++ TL SVL AC +L ELG+ H V K +ILN+ AL DMY KCG +E+A
Sbjct: 481 PADQSTLTSVLRACTSLSLLELGRQAHVHVLKFDQDLILNN----ALLDMYCKCGSLEDA 536
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
+F + +K+V +W+++I GLA +G EA+ +F M++ G KP+ +T++ VL ACSHA
Sbjct: 537 KFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHA 596
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
GL+ +G F +M Y ++P +HYGC++DLL RA LD+ ++I M EP+ V W +
Sbjct: 597 GLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRT 656
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL AC + NV+LA A + ++KL+P + G YVL+SNIYA +W+D ++RR MK+
Sbjct: 657 LLDACRARQ---NVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKK 713
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
R I K PGCS IE+N +H F++GD HP +EI
Sbjct: 714 RGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEI 747
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 205 HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
H +++ + + M GV + +T ++ C GA GK VH + N
Sbjct: 260 HCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPK 319
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
L L +MY K +EEA +F + E+NV +W ++I + + A+++ M
Sbjct: 320 TFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFR 379
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK------VEPNVKHYGCLVDLLC 378
G+ P+ T +VL AC E Y++++ + +E +V L+D+
Sbjct: 380 DGVMPNMFTFSSVLRAC----------ERLYDLKQLHSWIMKVGLESDVFVRSALIDVYS 429
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+ L EA +V R M M ++V+W S++ A A DG
Sbjct: 430 KMGELLEALKVFREM-MTGDSVVWNSIIAAFAQHSDG 465
>gi|242091784|ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
gi|241914605|gb|EER87749.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
Length = 507
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/343 (41%), Positives = 230/343 (67%), Gaps = 5/343 (1%)
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS-GVEV 228
L++ Y G V A+ LF M ++NV++WTAM++G+ + + E + F +M + GV
Sbjct: 157 LLSAYARCGRVDDAESLFAGMPDRNVISWTAMVSGYAQNGRHEEAVRTFLEMWEGCGVRP 216
Query: 229 NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
NE+T+ SVL ACA +GA LG+ V + ++ N + AL +MYAKCG I A VF
Sbjct: 217 NEVTVSSVLPACAAVGALALGRKVERYARGRGMLTNVYVANALVEMYAKCGSIRRAWMVF 276
Query: 289 K-IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
+ I ++++C+WNS+I A+HG E + +F +++M+G KPD +T + V+ AC+H GL+
Sbjct: 277 RGIGKQRDLCSWNSMIMAFAVHGLWREVLGLFHKLRMTGAKPDGITFVGVILACTHGGLV 336
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
++GK +F +MR ++ ++P ++HYGC+VDLL RA LL EA +I +MPMEP+AV+WG+LL
Sbjct: 337 DEGKLLFNSMREEFGLKPRIEHYGCMVDLLGRAGLLKEADSLIASMPMEPDAVIWGALLG 396
Query: 408 ACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
AC+ N+ELAE+A+E+L++LEP N N V++SNIYA+ +WD ++ +L+KE++
Sbjct: 397 ACSFH---GNLELAEVAVEKLMRLEPQNTANLVILSNIYASHGKWDGVAQVWKLLKEKDH 453
Query: 468 VKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
K+ G S IE++ +H+F+V D HP E +Y L+ + + ++
Sbjct: 454 KKSAGYSFIELDGRMHKFLVEDKSHPIYEMVYDTLDSITLIMK 496
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIK 328
AL YA+CG +++A +F + ++NV +W +++ G A +G EEAV+ F +M + G++
Sbjct: 156 ALLSAYARCGRVDDAESLFAGMPDRNVISWTAMVSGYAQNGRHEEAVRTFLEMWEGCGVR 215
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
P++VT+ +VL AC+ G + G+++ R + NV LV++ + + A+
Sbjct: 216 PNEVTVSSVLPACAAVGALALGRKV-ERYARGRGMLTNVYVANALVEMYAKCGSIRRAWM 274
Query: 389 VIRNMPMEPNAVLWGSLLTACA 410
V R + + + W S++ A A
Sbjct: 275 VFRGIGKQRDLCSWNSMIMAFA 296
>gi|125583346|gb|EAZ24277.1| hypothetical protein OsJ_08028 [Oryza sativa Japonica Group]
Length = 613
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/486 (34%), Positives = 273/486 (56%), Gaps = 15/486 (3%)
Query: 40 CTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVN-SSQIAYAHLVFNQIINPSTFA 98
C +L + ++ HA+ +K D L + +AYA +F + +P F
Sbjct: 41 CANLDEARKAHARHVKLGLDRSPRHARPLLAACALAADWPGSMAYAASIFAALDDPEAFD 100
Query: 99 FNTVIRGYAEAGLGHRG-----IQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGV 150
+NT++RGY A G ++L+ M+ +G++PDS+T+P + KAC G L++ + +
Sbjct: 101 YNTLMRGYVAAAGGGGRDPAAALRLFVDMVDDGVEPDSYTFPFVFKACAQLGALQEGRQL 160
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT--EKNVVTWTAMINGHVKQ 208
+VK F HS LI+FY G+ A+ F+QM E+ +W+A++ + +
Sbjct: 161 QGHLVK-LGFQRDEHSQNSLISFYGKCGEADLARRAFEQMEDDEQTTASWSALLAAYTRA 219
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ E ++ F M +G +E ++VS LSACA+LGA ++G+ +H + +N LN +
Sbjct: 220 GRWAECVESFGAMVRAGWRPDESSMVSALSACAHLGAHDVGRSIHCALLRNTARLNTFMS 279
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+L DMYAKCG IE A VF + +KN T+++++ GLA+HG G +A+++F M G +
Sbjct: 280 TSLVDMYAKCGCIENAAAVFDAMDDKNAWTYSAMVSGLALHGDGRKALEVFDAMVREGHR 339
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD + VL ACS AGL+E+G F MR ++K+ PN +HYGC+VDL+ RA LD+A
Sbjct: 340 PDAAVYVGVLNACSRAGLLEEGLRCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLDDARA 399
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
+I +MP P W SLL AC N+ELAE A++ L +L N G+Y+++S+++A
Sbjct: 400 LIGSMPTGPTDTAWRSLLNACRIH---GNLELAERALQELERLGATNAGDYIILSDMHAR 456
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
D A R +R + + PG S +E++ H F+ D HP +++IY ML +
Sbjct: 457 AHNRDAAAARRTEAVDRGLAQAPGYSAVEVHGATHRFVSQDRSHPRADDIYEMLHQMEWQ 516
Query: 509 LREECY 514
LR E Y
Sbjct: 517 LRFEGY 522
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/529 (34%), Positives = 288/529 (54%), Gaps = 46/529 (8%)
Query: 12 THFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQ-VHAQIIKASFDNRTISDTQLA- 69
T N N H +S+ + + LL K + Q +H IK RT D +A
Sbjct: 8 TIIANLPNPHSSSHDSNLRRVIISLLHKNRKNPKHVQSIHCHAIK----TRTSQDPFVAF 63
Query: 70 KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP 129
+L+ + I +A +F NP+ + + ++I G+ G I L+ QM+ +
Sbjct: 64 ELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLA 123
Query: 130 DSFTYPILLKACGDLRQV---KGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQL 185
D++ +LKAC R + K VH LV+KS + I +L+ Y G ++ A+
Sbjct: 124 DNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSI--ALKLVELYGKCGVLEDARK 181
Query: 186 LFDQMTEKNVVT-------------------------------WTAMINGHVKQKNYREG 214
+FD M E++VV WT +I+G V+ + G
Sbjct: 182 MFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRG 241
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
+++FR+M+ GVE NE+T V VLSACA LGA ELG+W+H ++ K + +N + AL +M
Sbjct: 242 LEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINM 301
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y++CG I+EA +F V K+V T+NS+IGGLA+HG EAV++F +M ++P+ +T
Sbjct: 302 YSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITF 361
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+ VL ACSH GL++ G EIF +M + +EP V+HYGC+VD+L R L+EA++ I M
Sbjct: 362 VGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMG 421
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
+E + + SLL+AC N+ + E + L + + G+++++SN YA+ +W
Sbjct: 422 VEADDKMLCSLLSACKIHK---NIGMGEKVAKLLSEHYRIDSGSFIMLSNFYASLGRWSY 478
Query: 455 AGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
A ++R M++ I+K PGCS IE+N+ +HEF GD RHP + IY LE
Sbjct: 479 AAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIYKKLE 527
>gi|15225365|ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g44880
gi|2344896|gb|AAC31836.1| hypothetical protein [Arabidopsis thaliana]
gi|330255385|gb|AEC10479.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 281/479 (58%), Gaps = 36/479 (7%)
Query: 48 QVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
Q+H+QI + F +D ++ +++ ++ A F+++ + S ++ +I GY
Sbjct: 99 QLHSQIWRFGF----CADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGY 154
Query: 107 AEAGLGHRGIQLYTQMIGNGLDP---DSFTYPILLKA---CGDLRQVKGVHSLVVKSKDF 160
G +L+ QM P D Y ++ GD+ + + F
Sbjct: 155 IRCGELDLASKLFDQM------PHVKDVVIYNAMMDGFVKSGDMTSARRL---------F 199
Query: 161 NSVIH----SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID 216
+ + H + T +I YCN D+ +A+ LFD M E+N+V+W MI G+ + K +EGI
Sbjct: 200 DEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIR 259
Query: 217 LFRKMR-DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
LF++M+ + ++ +++T++SVL A ++ GA LG+W H FV + + K+ A+ DMY
Sbjct: 260 LFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMY 319
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
+KCG IE+A R+F + EK V +WN++I G A++G A+ +F M + KPD++T++
Sbjct: 320 SKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITML 378
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
AV+TAC+H GL+E+G++ F+ MR + + ++HYGC+VDLL RA L EA ++I NMP
Sbjct: 379 AVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPF 437
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
EPN ++ S L+AC D +E AE +++ ++LEP NDGNYVL+ N+YAA +WDD
Sbjct: 438 EPNGIILSSFLSACGQYKD---IERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDF 494
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
G ++ +M++ K GCS+IEIN +V EF+ GD HP I+ +L + + + EE Y
Sbjct: 495 GMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/475 (34%), Positives = 279/475 (58%), Gaps = 12/475 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K +H+ IKA+ +R + L++ + A VF ++ + ++ ++I GY
Sbjct: 372 KVLHSYSIKAATLDREVRFNN--TLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGY 429
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSK-DFNS 162
GL I+L+ +M G+ PD + +L AC G+L+ K VH + ++ + NS
Sbjct: 430 VREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNS 489
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ + L Y G +K A +F M +K+V++W MI G+ K E + LF +M+
Sbjct: 490 FVSNA--LTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQ 547
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ + T+ +L ACA+L A + G+ +H + +N + + A+ DMY KCG +
Sbjct: 548 RES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLV 606
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A +F ++ K++ +W +I G +HG G EA+ F QM+M+GI+PD+V+ I++L ACS
Sbjct: 607 LARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACS 666
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
H+GL+++G +IF M+++ ++EPN++HY C+VDLL R L +A++ I+ MP++P+A +W
Sbjct: 667 HSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIW 726
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL C D V+LAE ER+ +LEP N G YVL++NIYA +W++ K+R+ +
Sbjct: 727 GALLCGCRIHHD---VKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKI 783
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
+R + KNPGCS IEI ++ F+ GD P +++I +L+ + ++EE Y+ +
Sbjct: 784 GQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPK 838
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 199/366 (54%), Gaps = 11/366 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+QVH I K F++ +T + LI ++ A +F+++ + ++N++I GY
Sbjct: 271 RQVHGLICKLGFNSY---NTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGY 327
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSV 163
+ GL RGI+++ +M+ G+D D T + AC G L K +HS +K+ +
Sbjct: 328 VKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDRE 387
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ L+ Y GD+ SA +F++M EK VV+WT+MI G+V++ I LF +M+
Sbjct: 388 VRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKS 447
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
GV + + S+L+ACA G + GK VH+++ +N + N + ALTDMYAKCG +++
Sbjct: 448 RGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKD 507
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A VF + +K+V +WN++IGG + EA+ +F +MQ KPD T+ +L AC+
Sbjct: 508 AHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACAS 566
Query: 344 AGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
++KG+EI Y +R Y + V + +VD+ + LL A + +P + V W
Sbjct: 567 LAALDKGREIHGYALRNGYSEDKYVTN--AVVDMYVKCGLLVLARSLFDMIP-NKDLVSW 623
Query: 403 GSLLTA 408
++
Sbjct: 624 TVMIAG 629
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 191/341 (56%), Gaps = 7/341 (2%)
Query: 70 KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP 129
KL+ V + +VF+++ F +N +I Y+ +G I L+ QM+ G+ P
Sbjct: 190 KLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKP 249
Query: 130 DSFTYPILLK---ACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
+S+T+ +LK A + + + VH L+ K FNS + LI+FY V+ AQ L
Sbjct: 250 NSYTFSSILKCFAAVARVEEGRQVHGLICKL-GFNSYNTVVNSLISFYFVGRKVRCAQKL 308
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD++T+++V++W +MI+G+VK GI++F KM GV+++ T+V+V ACAN+G
Sbjct: 309 FDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTL 368
Query: 247 ELGKWVHEFVNKNCIILND-KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
LGK +H + K + + + L DMY+KCG + A+RVF+ + EK V +W S+I G
Sbjct: 369 LLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITG 428
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
G + A+K+F +M+ G+ PD + ++L AC+ G ++ GK I ++ R+ +E
Sbjct: 429 YVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGK-IVHDYIRENNLET 487
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
N L D+ + + +A++V +M + + + W +++
Sbjct: 488 NSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMI 527
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 138/282 (48%), Gaps = 5/282 (1%)
Query: 130 DSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
D Y +L+ C + +R + V S++ S I + +L+ Y GD+K +++
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGV-KLVFMYVKCGDLKEGRMV 207
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD+++E + W MI+ + NY E I+LF++M + G++ N T S+L A +
Sbjct: 208 FDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARV 267
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
E G+ VH + K + + +L Y + A ++F + +++V +WNS+I G
Sbjct: 268 EEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGY 327
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
+G + +++F +M + G+ D T++ V AC++ G + GK + + ++
Sbjct: 328 VKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDRE 387
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
V+ L+D+ + L+ A V M E V W S++T
Sbjct: 388 VRFNNTLLDMYSKCGDLNSAIRVFERMD-EKTVVSWTSMITG 428
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 274/506 (54%), Gaps = 48/506 (9%)
Query: 48 QVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
QVH+ I K+ F +SD + + L++ + A VF+++ + + ++N++I +
Sbjct: 173 QVHSLIAKSPF----LSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCF 228
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDF-NS 162
+ G + ++ M+ + ++PD T ++ AC L +K VH VVK+ N
Sbjct: 229 EQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRND 288
Query: 163 VIHS------------------------------LTRLITFYCNFGDVKSAQLLFDQMTE 192
+I S T +I+ Y K+A+L+F +M E
Sbjct: 289 IILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAE 348
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
+NVV+W A+I G+ + E + LF ++ V + ++L ACA+L LG
Sbjct: 349 RNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQA 408
Query: 253 HEFVNKNCIILNDK------LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
H V K+ +G +L DMY KCG +EE VF+ ++E++ +WN++I G
Sbjct: 409 HVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGF 468
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
A +G G EA+++F +M SG KPD +T+I VL+AC HAG +E+G+ F +M RD+ V P
Sbjct: 469 AQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPL 528
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
HY C+VDLL RA L+EA +I MPM+P++V+WGSLL AC N+ L + E
Sbjct: 529 RDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH---RNITLGKYVAE 585
Query: 427 RLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFM 486
+L+++EP N G YVL+SN+YA +W+D +R+ M++ + K PGCS I+I H FM
Sbjct: 586 KLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFM 645
Query: 487 VGDGRHPCSEEIYSMLEYVAISLREE 512
V D HP ++I+S+L+ + +R E
Sbjct: 646 VKDKSHPRKKQIHSLLDILIAEMRPE 671
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 217/491 (44%), Gaps = 87/491 (17%)
Query: 9 SQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL 68
+ L+ FT+S+ K ++ KS + + VHA +IK+ F N
Sbjct: 11 ADLSSFTDSSPFAKLLDSCIKSK---------LSAIYVRYVHASVIKSGFSNEIFIQN-- 59
Query: 69 AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVI------------------------- 103
+LI++ + VF+++ + + +N+V+
Sbjct: 60 -RLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 104 ------RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-KG--VHSLV 154
G+A+ + + M G + +++ +L AC L + KG VHSL+
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 155 VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG 214
KS F S ++ + L+ Y G+V AQ +FD+M ++NVV+W ++I + E
Sbjct: 179 AKSP-FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 237
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND-KLGAALTD 273
+D+F+ M +S VE +E+TL SV+SACA+L A ++G+ VH V KN + ND L A D
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 297
Query: 274 MYAKCGYIEEALRVFKI-------------------------------VLEKNVCTWNSI 302
MYAKC I+EA +F + E+NV +WN++
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS-----HAGLIEKGKEIFYNM 357
I G +G EEA+ +F ++ + P + +L AC+ H G+ + +
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF 417
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ E ++ L+D+ + ++E Y V R M ME + V W +++ A +G
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQ--NGYG 474
Query: 418 VELAEIAMERL 428
E E+ E L
Sbjct: 475 NEALELFREML 485
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 174/366 (47%), Gaps = 44/366 (12%)
Query: 53 IIKASFDNRTISDTQ-LAKLIESLVNSSQIA-YAHLVFNQIINPS----TFAFNTVIRGY 106
+K + D + +D+ AKL++S + S A Y V +I F N +I Y
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAY 65
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHS 166
++ G G Q++ +M P Y +NSV+
Sbjct: 66 SKCGSLEDGRQVFDKM------PQRNIYT------------------------WNSVVTG 95
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
LT+L G + A LF M E++ TW +M++G + E + F M G
Sbjct: 96 LTKL-------GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGF 148
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
+NE + SVLSAC+ L G VH + K+ + + +G+AL DMY+KCG + +A R
Sbjct: 149 VLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQR 208
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF + ++NV +WNS+I +G EA+ +F M S ++PD+VTL +V++AC+
Sbjct: 209 VFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA 268
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
I+ G+E+ + ++ K+ ++ VD+ + + EA + +MP+ N + S++
Sbjct: 269 IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMI 327
Query: 407 TACASA 412
+ A A
Sbjct: 328 SGYAMA 333
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQL---AKLIESLVNSSQIAYAHLVFN 89
+L+ C L + Q H ++K F ++ + + LI+ V + +LVF
Sbjct: 392 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-K 148
+++ ++N +I G+A+ G G+ ++L+ +M+ +G PD T +L ACG V +
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEE 511
Query: 149 GVHSLVVKSKDFN--SVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMINGH 205
G H ++DF + T ++ G ++ A+ + ++M + + V W +++
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+N G + K+ + VE + +LS N+ A ELGKW
Sbjct: 572 KVHRNITLGKYVAEKLLE--VEPSNSGPYVLLS---NMYA-ELGKW 611
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/474 (35%), Positives = 280/474 (59%), Gaps = 30/474 (6%)
Query: 48 QVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
Q+H+QI ++ F +D ++ +++ ++ A VF+++ S ++ +I GY
Sbjct: 99 QLHSQIWRSGF----CADMYVSTGVVDMYAKFGKMGCARNVFDEMPQRSEVSWTALICGY 154
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKGVHSLVVKSKDFNSV 163
G +L+ QM D Y ++ GD+ + + F+ +
Sbjct: 155 VRFGELDLASKLFDQMPQV---KDVVIYNAMMDGFVKSGDMTSARRL---------FDEM 202
Query: 164 IH----SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
H + T +I YCN D+ SA+ LFD M E+N+V+W MI G+ + K +E I LF+
Sbjct: 203 THKTVITWTTMIHGYCNSNDIDSARKLFDAMPERNLVSWNTMIGGYCQNKQPQEAIRLFQ 262
Query: 220 KMR-DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
+M+ + ++ +++T++SVL A ++ GA LG+W H FV + + K+ A+ DMY+KC
Sbjct: 263 EMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKNLDKKVKVCTAILDMYSKC 322
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G IE+A R+F + EK V +WN++I G A++G A+ +F M KPD++T++AV+
Sbjct: 323 GEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAHAALDLFLTMAKEE-KPDEITMLAVI 381
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
+AC+H GL+E+G++ F MR+ + + ++HYGC+VDLL RA L +A +I NMP +PN
Sbjct: 382 SACNHGGLVEEGRKWFQMMRK-FGLNAKIEHYGCMVDLLGRAGNLKQAEHLITNMPFKPN 440
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
++ S L+AC D +E AE +++ ++LEP NDGNYVL+ N+YAA +WDD G +
Sbjct: 441 GIILSSFLSACGQYKD---IERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMV 497
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
+ +M++ K GCS+IEIN +V EF+ GD HP + I+ +LE + + ++EE
Sbjct: 498 KNMMRKNEAKKEVGCSLIEINYIVSEFISGDTTHPHRQSIHLVLEKLLVHMKEE 551
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 118/273 (43%), Gaps = 13/273 (4%)
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEK-NVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ T+ + + + A+ LFDQ + + +MI +++ ++Y + +R +R
Sbjct: 10 VQIFTKFLVISASAVGIGYARKLFDQRPHREDSFLCNSMIKAYLETRHYNDSFAFYRDLR 69
Query: 223 -DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
++ + + T ++ +C G +H + ++ + + + DMYAK G +
Sbjct: 70 KETCLAPDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGVVDMYAKFGKM 129
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
A VF + +++ +W ++I G G + A K+F QM +K D V A++
Sbjct: 130 GCARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLF--DQMPQVK-DVVIYNAMMDGF 186
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
+G + + +F D V + ++ C + +D A ++ MP E N V
Sbjct: 187 VKSGDMTSARRLF-----DEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMP-ERNLVS 240
Query: 402 WGSLLTA-CASADDGANVELAEIAMERLIKLEP 433
W +++ C + + L + M+ L+P
Sbjct: 241 WNTMIGGYCQNKQPQEAIRLFQ-EMQATTSLDP 272
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 282/477 (59%), Gaps = 10/477 (2%)
Query: 47 KQVHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
+Q+H+Q I+ +R + + + V+ S A A +F+QI++ + F++ +I G
Sbjct: 291 QQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCA-ARKIFDQILDHNVFSWTAMITG 349
Query: 106 YAE-AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFN 161
Y + G + L+ MI + P+ FT+ LKAC +L ++ V + VK F+
Sbjct: 350 YVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVK-LGFS 408
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
SV LI+ Y G + A+ FD + EKN++++ +I+ + K N E ++LF ++
Sbjct: 409 SVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEI 468
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
D G+ + T S+LS A++G G+ +H V K+ + LN + AL MY++CG I
Sbjct: 469 EDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNI 528
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
E A +VF+ + ++NV +W SII G A HG +A+++F +M G++P++VT IAVL+AC
Sbjct: 529 ESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSAC 588
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SH GL+ +G + F +M ++ V P ++HY C+VD+L R+ L EA + I +MP + +A++
Sbjct: 589 SHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALV 648
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
W + L AC N+EL + A + +I+ EP + Y+L+SN+YA+ ++WD+ +R+
Sbjct: 649 WRTFLGACRVH---GNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKA 705
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
MKE+ ++K GCS +E+ + VH+F VGD HP + EIY L+ +++ +++ Y +
Sbjct: 706 MKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNL 762
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 175/347 (50%), Gaps = 36/347 (10%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A VF ++ + + +I + G I L+ MI +G +PD FT ++ AC +
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACAN 283
Query: 144 LRQV---KGVHSLVVKSKDFNSVIHSLTR-------LITFY--CNF-GDVKSAQLLFDQM 190
+ + + +HS ++ H LT LI Y C+ G + +A+ +FDQ+
Sbjct: 284 MELLLLGQQLHSQAIR--------HGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI 335
Query: 191 TEKNVVTWTAMINGHVKQKNY-REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
+ NV +WTAMI G+V++ Y E +DLFR M + V N T S L ACANL A +G
Sbjct: 336 LDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIG 395
Query: 250 KWVHE------FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
+ V F + NC+ +L MYA+ G I++A + F I+ EKN+ ++N++I
Sbjct: 396 EQVFTHAVKLGFSSVNCV------ANSLISMYARSGRIDDARKAFDILFEKNLISYNTVI 449
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
A + EEA+++F +++ G+ T ++L+ + G I KG++I + + +
Sbjct: 450 DAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS-GL 508
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ N L+ + R ++ A++V +M + N + W S++T A
Sbjct: 509 KLNQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFA 554
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 163/325 (50%), Gaps = 18/325 (5%)
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLV 154
+++ ++ +A +G R + + MI NG P+ + + +AC V + V
Sbjct: 135 SWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFV 194
Query: 155 VKSKDFNSVIHSLTRLITFYC-NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYRE 213
+K+ S + LI + GD+ SA +F++M E+N VTWT MI ++ E
Sbjct: 195 IKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGE 254
Query: 214 GIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTD 273
IDLF M SG E + TL V+SACAN+ LG+ +H ++ + L+ +G L +
Sbjct: 255 AIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLIN 314
Query: 274 MYAKC---GYIEEALRVFKIVLEKNVCTWNSIIGG-LAIHGCGEEAVKMFWQMQMSGIKP 329
MYAKC G + A ++F +L+ NV +W ++I G + G EEA+ +F M ++ + P
Sbjct: 315 MYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIP 374
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC----LVDLLCRARLLDE 385
+ T + L AC++ + G+++F + V+ C L+ + R+ +D+
Sbjct: 375 NHFTFSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCVANSLISMYARSGRIDD 429
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACA 410
A + ++ E N + + +++ A A
Sbjct: 430 ARKAF-DILFEKNLISYNTVIDAYA 453
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 179/405 (44%), Gaps = 52/405 (12%)
Query: 110 GLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK-DFNSVIH 165
G H+ I M+ G PD TY + LK C R VH + +S +SV
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSV-- 102
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQM-TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
+L LI+ Y G + A +F M + +++++W+AM++ + F M ++
Sbjct: 103 TLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN 162
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK-LGAALTDMYAKC-GYIE 282
G NE + AC+ +G + FV K + +D +G L DM+ K G +
Sbjct: 163 GYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLV 222
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A +VF+ + E+N TW +I L G EA+ +F M SG +PD TL V++AC+
Sbjct: 223 SAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACA 282
Query: 343 HAGLIEKGKEIFYN-MRRDYKVEPNVK------HYGCLVD-LLCRAR-----LLD----- 384
+ L+ G+++ +R ++ V + C VD +C AR +LD
Sbjct: 283 NMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFS 342
Query: 385 ----------------EAYEVIRNMPME---PNAVLWGSLLTACASADDGANVELAEIAM 425
EA ++ R M + PN + S L ACA+ A + + E
Sbjct: 343 WTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANL---AALRIGEQVF 399
Query: 426 ERLIKLEPFNDGNYVLMS--NIYAAKAQWDDAGKMRRLMKERNIV 468
+KL F+ N V S ++YA + DDA K ++ E+N++
Sbjct: 400 THAVKL-GFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLI 443
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
L F T N +T + + + I M G + T L C
Sbjct: 23 LQFPTFTNPNPLT--GRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTR 80
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSII 303
+ ++G VHE + ++ + L+ +L +Y+KCG E+A +F+++ +++ +W++++
Sbjct: 81 SFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMV 140
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
A + G A+ F M +G P++ A ACS A + G IF + + +
Sbjct: 141 SCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYL 200
Query: 364 EPNVKHYGC-LVDLLCRARL-LDEAYEVIRNMPMEPNAVLWGSLLT 407
+ +V GC L+D+ + R L A++V MP E NAV W ++T
Sbjct: 201 QSDVC-VGCGLIDMFVKGRGDLVSAFKVFEKMP-ERNAVTWTLMIT 244
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 244/396 (61%), Gaps = 21/396 (5%)
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDF- 160
GY++ G + +Y +M+ N ++P +F + LKAC DLR++ +GVH+ VVKS +
Sbjct: 4 GYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGP 63
Query: 161 -NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
V + L RL T F +V +FDQM E+NV +W ++I+G VK+ E +D+FR
Sbjct: 64 DQVVNNGLLRLYTQCECFNEVLK---VFDQMPERNVASWNSLISGFVKEDKLGEALDVFR 120
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK-----NCIILNDKLGAALTDM 274
+M+ G+ + +TL ++L CA + A GK +H + K + ++LN +L DM
Sbjct: 121 RMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLN-----SLVDM 175
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y KCG ++ R+F + K++ +WN+++ G AI+G A+ +F +M GI+PDDVT
Sbjct: 176 YVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTF 235
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
IA+L+ CSHAGL E G+++F+ M D+ V P+++HY CLVD+L RA +D A V++NMP
Sbjct: 236 IALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMP 295
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
M+ + +WGSLL +C ++ V LAE RL +LEP+N GNYV++SNIYA WD
Sbjct: 296 MKTSGSIWGSLLNSCRLHNE---VPLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDS 352
Query: 455 AGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
+R +M+ R I K GCS I++ + +H F+ G G
Sbjct: 353 VNMVREMMQTRRIRKEAGCSWIQVKNKIHSFVAGGG 388
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 2/210 (0%)
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
M G+ K RE + ++ +M + +E + L ACA+L +G+ VH V K+
Sbjct: 1 MAIGYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSS 60
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ + L +Y +C E L+VF + E+NV +WNS+I G EA+ +F
Sbjct: 61 EGPDQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFR 120
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+MQ G+ VTL +L C+ + GKEI + + + P+V LVD+ +
Sbjct: 121 RMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSAR-RPDVLVLNSLVDMYVKC 179
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
++D + M + W ++LT A
Sbjct: 180 GVVDYGRRLFDGM-RSKDLTSWNTMLTGYA 208
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP+ + T L+ K++HAQI+K++ R L L++ V + Y +F+ + +
Sbjct: 138 LPICARVTALLSGKEIHAQIVKSA---RRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRS 194
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
++NT++ GYA G + L+ +M G+ PD T+ LL C
Sbjct: 195 KDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGC 242
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 177/521 (33%), Positives = 277/521 (53%), Gaps = 89/521 (17%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQI------AYAHLVFN 89
L ++C L Q KQVHA ++ F +SD+ + L+ +S + A+A LVF+
Sbjct: 14 LWRRCRSLRQIKQVHALMVLQGF----LSDSSA---LRELIFASAVGVRGGTAHARLVFD 66
Query: 90 QIINPSTFAFNTVIRGYAEA---------------------------------------- 109
+I +P F +NT+IRG A +
Sbjct: 67 RIPHPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACA 126
Query: 110 --GLGHRGIQLYTQMIGNGLDPDSFTYPILL---KACGDLRQVKGVHSLVVKSKD--FNS 162
G G G Q++ ++ G + D+F L+ GDL + + +++
Sbjct: 127 AMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSA 186
Query: 163 VIHSLTR------------------------LITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
+I R +IT Y GD+ A+ LFD +++VV+W
Sbjct: 187 MISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSW 246
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
AMI+G+V+ + ++ ++LF +M+ G + + +T++S+LSACA+ G + G+ +H F++
Sbjct: 247 NAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSG 306
Query: 259 NC--IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAV 316
I LG AL DMYAKCG + AL VF ++ +KNV TWNSIIGGLA+HG E++
Sbjct: 307 RFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESI 366
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDL 376
+F +M +KPD++T +AVL ACSH G+++KG E F M++ Y++EPN+KHYGC+VD+
Sbjct: 367 AVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDM 426
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFND 436
L R LL EA+E I M +EPN V+W +LL AC + +ELAE A L+K
Sbjct: 427 LSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGE---IELAEHANRELLKARSDAS 483
Query: 437 GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
G++VL+SNIYA+ +W + MR+LM + + K G +VI+
Sbjct: 484 GDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVID 524
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 145/348 (41%), Gaps = 74/348 (21%)
Query: 135 PILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLI--TFYCNFGDVKSAQLLFDQMTE 192
P L + C LRQ+K VH+L+V + F S +L LI + G A+L+FD++
Sbjct: 12 PALWRRCRSLRQIKQVHALMVL-QGFLSDSSALRELIFASAVGVRGGTAHARLVFDRIPH 70
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS-------VLSACANLGA 245
+ + +I G R+ + ++ +M + + +TL VL ACA +GA
Sbjct: 71 PDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGA 130
Query: 246 SELGKWVH-----------EFVNKNCIILNDKLG-----AALTDMYA------------- 276
E G VH FV I ++ LG AAL D A
Sbjct: 131 GETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISG 190
Query: 277 ---------------------------------KCGYIEEALRVFKIVLEKNVCTWNSII 303
K G + A +F +++V +WN++I
Sbjct: 191 FARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMI 250
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYK 362
G G ++A+++F QMQ G KPD VT++++L+AC+ +G ++ G+ + + R +
Sbjct: 251 SGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRFSR 310
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ P L+D+ + + A EV M + N W S++ A
Sbjct: 311 IGPTTALGNALIDMYAKCGSMTSALEVFWLM-QDKNVSTWNSIIGGLA 357
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 252/435 (57%), Gaps = 42/435 (9%)
Query: 70 KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLG--HRGIQLYTQMIGNGL 127
++ V ++ A +F+++ TF++ T+I GY + G R +L+ QM L
Sbjct: 186 SMVAGYVGCGEMGLAQEMFDEMPQKDTFSWATLIDGYGKQGGAGVDRARELFDQMPERDL 245
Query: 128 DPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
C +NS+I Y G + A+ LF
Sbjct: 246 ------------VC------------------WNSMIDG-------YARHGRMDEARSLF 268
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
++M E+NV++W+ +I+GHV +E ++ F+ M G+ + + V +SACA LGA E
Sbjct: 269 EEMPERNVISWSIVIDGHVSCGEAKEALEYFQSMLRCGLRPDRIAAVGAVSACAQLGALE 328
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
G+W+H ++ K ++ + + AL DMY KCG ++ A+ +F+ + E++V TWN +I GL
Sbjct: 329 QGRWLHSYLEKKKLLSDVVVQTALIDMYVKCGCLDLAMLIFESMAERSVVTWNVMIVGLG 388
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
HG G +AV +F +M+ + DD++++ +LTAC+HAGL+ +G EIF+ M++D+ ++P V
Sbjct: 389 THGFGLDAVTLFHRMEAESVAVDDLSVLGMLTACTHAGLVSEGLEIFHRMKKDFGIDPKV 448
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+HYG LVDLL RA LD+A I MPMEP LWGSLL AC S + VELAE+++ER
Sbjct: 449 EHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLLAACRSH---SCVELAELSVER 505
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L L + G YVL+SNIYA + W D ++R+LM + + K+ G SVIE++ +HEF+
Sbjct: 506 LADLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRKDIGRSVIEVDGEIHEFVN 565
Query: 488 GDGRHPCSEEIYSML 502
G G + C +E+Y ML
Sbjct: 566 GVGSYICKDEMYLML 580
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 189/386 (48%), Gaps = 24/386 (6%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVN-SSQIAYAHLVFNQI 91
L L+ C Q HA ++ + + S +L+ L+ +L + S A A +VF ++
Sbjct: 14 LSRLRACRSASHALQCHALLLTSG--HLAASPLRLSNHLLLALASVPSAAALADVVFARL 71
Query: 92 INPST---FAFNTVIRGYAEAGLGHRGIQLY-TQMIGNGLDPDSFTYPILLKACGDLRQV 147
P+ FA+NT IR +A A R LY +M G+ PD++T+P +LKACG
Sbjct: 72 PLPAARDPFAWNTAIRLHAPAR--PRAALLYFARMRRCGVRPDAYTFPAVLKACGCAPGC 129
Query: 148 KG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM--TEKNVVTWTAMI 202
+ VH+ V+ + + + ++ LI+FYC D++S + +FD+ +++V+W +M+
Sbjct: 130 RAGLLVHAEAVR-RGLAADLFTVNALISFYCRILDIRSGRKVFDEAGGVSRDLVSWNSMV 188
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
G+V ++F +M + TL+ G + + ++ +
Sbjct: 189 AGYVGCGEMGLAQEMFDEMPQKDT-FSWATLIDGYGKQGGAGVDRARELFDQMPERDLVC 247
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
N ++ D YA+ G ++EA +F+ + E+NV +W+ +I G G +EA++ F M
Sbjct: 248 WN-----SMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVSCGEAKEALEYFQSM 302
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
G++PD + + ++AC+ G +E+G+ + + + K+ +V L+D+ +
Sbjct: 303 LRCGLRPDRIAAVGAVSACAQLGALEQGRWLHSYLEKK-KLLSDVVVQTALIDMYVKCGC 361
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTA 408
LD A + +M E + V W ++
Sbjct: 362 LDLAMLIFESMA-ERSVVTWNVMIVG 386
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 279/488 (57%), Gaps = 15/488 (3%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L CT L KQ+H+++I+ L + + + VF Q+
Sbjct: 237 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 296
Query: 93 NPSTFAFNTVIRGYAEAG-LGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---K 148
+ ++ +I Y ++G I+L+ +MI + P+ F++ +LKACG+L +
Sbjct: 297 EHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 356
Query: 149 GVHSLVVK--SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
V+S VK N V +SL I+ Y G ++ A+ FD + EKN+V++ A+++G+
Sbjct: 357 QVYSYAVKLGIASVNCVGNSL---ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 413
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
K E LF ++ D+G+ ++ T S+LS A++GA G+ +H + K N
Sbjct: 414 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 473
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+ AL MY++CG IE A +VF + ++NV +W S+I G A HG A++MF +M +G
Sbjct: 474 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 533
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
KP+++T +AVL+ACSH G+I +G++ F +M +++ + P ++HY C+VDLL R+ LL EA
Sbjct: 534 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 593
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
E I +MP+ +A++W +LL AC N EL A E +++ EP + Y+L+SN++
Sbjct: 594 MEFINSMPLMADALVWRTLLGACRVH---GNTELGRHAAEMILEQEPDDPAAYILLSNLH 650
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
A+ QW D K+R+ MKERN++K GCS IE+ + VH F VG+ HP + +IY L+ +A
Sbjct: 651 ASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLA 710
Query: 507 ISLREECY 514
++E Y
Sbjct: 711 SKIKEMGY 718
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 190/391 (48%), Gaps = 25/391 (6%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL+ C F K VH +++++ + + L LI A L+F +
Sbjct: 32 LLKSCIRFRNFQLGKLVHRKLMQSGLE---LDSVVLNTLISLYSKCGDTETARLIFEGMG 88
Query: 93 NPSTF-AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---K 148
N +++ ++ +A + + I + M+ G P+ + + +++AC + +
Sbjct: 89 NKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGE 148
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYC-NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
++ VVK+ + + LI + GD+ SA +FD+M E+N+VTWT MI +
Sbjct: 149 IIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQ 208
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
R+ IDLF M SG + T SVLSAC LG LGK +H V + + L+ +
Sbjct: 209 LGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCV 268
Query: 268 GAALTDMYAKC---GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG-CGEEAVKMFWQMQ 323
G +L DMYAKC G ++++ +VF+ + E NV +W +II G C +EA+++F +M
Sbjct: 269 GCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMI 328
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC----LVDLLCR 379
I+P+ + +VL AC + G++++ Y V+ + C L+ + R
Sbjct: 329 SGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-----SYAVKLGIASVNCVGNSLISMYAR 383
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ +++A + ++ E N V + +++ A
Sbjct: 384 SGRMEDARKAF-DILFEKNLVSYNAIVDGYA 413
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 161/313 (51%), Gaps = 18/313 (5%)
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK-DFNSV 163
+ G H M PD TY ILLK+C R K VH +++S + +SV
Sbjct: 3 DVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSV 62
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEK-NVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ L LI+ Y GD ++A+L+F+ M K ++V+W+AM++ + I F M
Sbjct: 63 V--LNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDML 120
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK-LGAALTDMYAK-CGY 280
+ G NE +V+ AC+N + +G+ ++ FV K + D +G L DM+ K G
Sbjct: 121 ELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGD 180
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
+ A +VF + E+N+ TW +I A GC +A+ +F M++SG PD T +VL+A
Sbjct: 181 LGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 240
Query: 341 CSHAGLIEKGKEIFYN-MRRDYKVEPNVKHYGC-LVDLLCRARL---LDEAYEVIRNMPM 395
C+ GL+ GK++ +R ++ V GC LVD+ + +D++ +V MP
Sbjct: 241 CTELGLLALGKQLHSRVIRLGLALDVCV---GCSLVDMYAKCAADGSVDDSRKVFEQMP- 296
Query: 396 EPNAVLWGSLLTA 408
E N + W +++TA
Sbjct: 297 EHNVMSWTAIITA 309
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 280/531 (52%), Gaps = 63/531 (11%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP L + +HL + +HA ++ R S + LA + SL +S+ ++YA LV Q
Sbjct: 13 LPSLAEASHL---RALHAHLV---VSGRLASPSHLAAFLASLASSNHLSYARLVLPQ--R 64
Query: 94 PSTF-AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA------------ 140
P+T A N IR A G R + L PD ++ L++A
Sbjct: 65 PATLLAHNAFIRALAR---GPRPCLAFAAFRDLPLPPDHYSLNFLVRAATALVASAAEEK 121
Query: 141 ------------------------CGDLRQVKGVHSLVVKSKDFNSV-----------IH 165
D GV S+ D S +
Sbjct: 122 HVSAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPDVV 181
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
+T ++ GDV +A+ LFD M +++ V W+AMI G++ RE + LF +M +G
Sbjct: 182 CVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAG 241
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
V E TLVSVL+ACA +G + GKWVH +V + ++ KLG AL DMY+KCG + A+
Sbjct: 242 TTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAM 301
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
VF+ + E+NV TW S + GLA++G G E +++F +M+ +GI+P+ V+ +AVL CS AG
Sbjct: 302 EVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAG 361
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
L+++G+ F +M + Y V+P +HYGC+VDL RA LD+A I +MPMEP+ +WG+L
Sbjct: 362 LVDEGRACFDSMDK-YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGAL 420
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L A + +V+L + A+++L+ +E ND +V +SNIYA W ++R +MK +
Sbjct: 421 LNASRIHN---SVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAK 477
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
+ K PG S IE++ VHEF VG HP EI ML + LR + Y A
Sbjct: 478 GVKKVPGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTA 528
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 182/493 (36%), Positives = 280/493 (56%), Gaps = 53/493 (10%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
N+NT K +HL L + + KQ+HAQI+ RTI
Sbjct: 9 NTNTNIKHINHL--LNQSNSISHVKQIHAQIL------RTIH------------------ 42
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGL-GHRGIQLYTQMIG---NGLDPDSFTYPILL 138
P++F +N +I+ Y+++ L + I LY +I N L PD TYP +L
Sbjct: 43 ----------TPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVL 92
Query: 139 KACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE-KN 194
KAC L + K VH+ V+K F + LI FY + G +++A+ +FD+M E +N
Sbjct: 93 KACAYLFSLFEGKQVHAHVLK-LGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRN 151
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
VV+W MI+ + K +Y + +F +M E + T+ SV+ AC LG+ LG WVH
Sbjct: 152 VVSWNVMIDSYAKVGDYDIVLIMFCEMMKV-YEPDCYTMQSVIRACGGLGSLSLGMWVHA 210
Query: 255 FVNKNC---IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
FV K C ++ + + L DMY KCG +E A +VF+ + ++V +WNSII G A+HG
Sbjct: 211 FVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGK 270
Query: 312 GEEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
+ A+ F +M ++ I P+ +T + VL+AC+H+G++++G F M ++Y VEP++ HY
Sbjct: 271 AKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHY 330
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
GCLVDL RA + EA V+ MP++P+AV+W SLL AC A+VEL+E +++ +
Sbjct: 331 GCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRSLLDACYKQH--ASVELSEEMAKQIFE 388
Query: 431 LE-PFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGD 489
G YVL+S +YA+ ++W+D G +R+LM ++ + K PGCS+IEIN HEF GD
Sbjct: 389 SNGSVCGGAYVLLSKVYASASRWNDVGLLRKLMNDKGVSKKPGCSLIEINGAAHEFFAGD 448
Query: 490 GRHPCSEEIYSML 502
HP S++IY +
Sbjct: 449 TNHPQSKDIYKFM 461
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 177/521 (33%), Positives = 277/521 (53%), Gaps = 89/521 (17%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQI------AYAHLVFN 89
L ++C L Q KQVHA ++ F +SD+ + L+ +S + A+A LVF+
Sbjct: 14 LWRRCRSLRQIKQVHALMVLQGF----LSDSSA---LRELIFASAVGVRGGTAHARLVFD 66
Query: 90 QIINPSTFAFNTVIRGYAEA---------------------------------------- 109
+I +P F +NT+IRG A +
Sbjct: 67 RIPHPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACA 126
Query: 110 --GLGHRGIQLYTQMIGNGLDPDSFTYPILL---KACGDLRQVKGVHSLVVKSKD--FNS 162
G G G Q++ ++ G + D+F L+ GDL + + +++
Sbjct: 127 AMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSA 186
Query: 163 VIHSLTR------------------------LITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
+I R +IT Y GD+ A+ LFD +++VV+W
Sbjct: 187 MISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSW 246
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
AMI+G+V+ + ++ ++LF +M+ G + + +T++S+LSACA+ G + G+ +H F++
Sbjct: 247 NAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSG 306
Query: 259 NC--IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAV 316
I LG AL DMYAKCG + AL VF ++ +KNV TWNSIIGGLA+HG E++
Sbjct: 307 RFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESI 366
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDL 376
+F +M +KPD++T +AVL ACSH G+++KG E F M++ Y++EPN+KHYGC+VD+
Sbjct: 367 AVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDM 426
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFND 436
L R LL EA+E I M +EPN V+W +LL AC + +ELAE A L+K
Sbjct: 427 LSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGE---IELAEHANRELLKARSDAS 483
Query: 437 GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
G++VL+SNIYA+ +W + MR+LM + + K G +VI+
Sbjct: 484 GDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVID 524
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 145/348 (41%), Gaps = 74/348 (21%)
Query: 135 PILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLI--TFYCNFGDVKSAQLLFDQMTE 192
P L + C LRQ+K VH+L+V + F S +L LI + G A+L+FD++
Sbjct: 12 PALWRRCRSLRQIKQVHALMVL-QGFLSDSSALRELIFASAVGVRGGTAHARLVFDRIPH 70
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS-------VLSACANLGA 245
+ + +I G R+ + ++ +M + + +TL VL ACA +GA
Sbjct: 71 PDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGA 130
Query: 246 SELGKWVH-----------EFVNKNCIILNDKLG-----AALTDMYA------------- 276
E G VH FV I ++ LG AAL D A
Sbjct: 131 GETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISG 190
Query: 277 ---------------------------------KCGYIEEALRVFKIVLEKNVCTWNSII 303
K G + A +F +++V +WN++I
Sbjct: 191 FARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMI 250
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYK 362
G G ++A+++F QMQ G KPD VT++++L+AC+ +G ++ G+ + + R +
Sbjct: 251 SGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRFSR 310
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ P L+D+ + + A EV M + N W S++ A
Sbjct: 311 IGPTTALGNALIDMYAKCGSMTSALEVFWLM-QDKNVSTWNSIIGGLA 357
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 172/475 (36%), Positives = 270/475 (56%), Gaps = 12/475 (2%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q K++HA +I+ F + ++ L +L+E+LV + YA VF+++ P F +NT+ +
Sbjct: 26 QLKKIHAVVIRTGFSEK---NSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFK 82
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFN 161
GY L + LY +M G+ PD FTYP ++KA L + +H+ V+K+ F
Sbjct: 83 GYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKN-GFE 141
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
+ T L+ Y FG++ SA+ LF+ M K++V W A I V+ N ++ F KM
Sbjct: 142 CLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKM 201
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
V+ + T+VS+LSAC LG+ ++G+ +++ K I N + A DM+ KCG
Sbjct: 202 CADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLKCGST 261
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
E A +F + ++NV +W+++I G A++G EA+ +F MQ G++P+ VT + VL+AC
Sbjct: 262 EAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSAC 321
Query: 342 SHAGLIEKGKEIFYNMRR--DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
SHAGL+ +GK F M R D +EP +HY C+VDLL R+ LL+EAYE I+ M +EP+
Sbjct: 322 SHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVEPDT 381
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
+WG+LL ACA D + L + + L++ P +VL+SNIYAA +WD K+R
Sbjct: 382 GIWGALLGACAVHRD---MILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVR 438
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
M++ K S +E + +H F GD HP S+ IY L+ + +R Y
Sbjct: 439 SKMRKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKIRNMGY 493
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/439 (37%), Positives = 259/439 (58%), Gaps = 17/439 (3%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
L++ V + A VF+++ S ++ VI GYA G +L+ +M D D
Sbjct: 166 LVDMYVKFGVLGSARKVFDEMSVRSKVSWTAVIVGYARCGDMSEARRLFDEM----EDRD 221
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
+ ++ + V L + ++ N V S T +++ YC GDV++A+L+FD M
Sbjct: 222 IVAFNAMIDGYVKMGCVGLARELFNEMRERNVV--SWTSMVSGYCGNGDVENAKLMFDLM 279
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
EKNV TW AMI G+ + + + ++LFR+M+ + VE NE+T+V VL A A+LGA +LG+
Sbjct: 280 PEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVCVLPAVADLGALDLGR 339
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
W+H F + + + ++G AL DMYAKCG I +A F+ + E+ +WN++I G A++G
Sbjct: 340 WIHRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTERETASWNALINGFAVNG 399
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
C +EA+++F +M G P++VT+I VL+AC+H GL+E+G+ F M R + + P V+HY
Sbjct: 400 CAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGRRWFNAMER-FGIAPQVEHY 458
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
GC+VDLL RA LDEA +I+ MP + N ++ S L AC +D V AE ++ ++K
Sbjct: 459 GCMVDLLGRAGCLDEAENLIQTMPYDANGIILSSFLFACGYFND---VLRAERVLKEVVK 515
Query: 431 LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
++ GNYV++ N+YA + +W D ++++MK+R K CSVIEI EF GD
Sbjct: 516 MDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKRGTSKEVACSVIEIGGSFIEFAAGDY 575
Query: 491 RHPCSEEIYSMLEYVAISL 509
H S LE + ++L
Sbjct: 576 LH-------SHLEVIQLTL 587
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 185/397 (46%), Gaps = 41/397 (10%)
Query: 38 QKCTHLVQFK--------QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ-----IAYA 84
+ C H++Q + Q+HA I++ S + T SL S++ I +A
Sbjct: 17 RTCLHILQCRTKSIPTLLQIHAFILRHSLHSNLNLLTAFVTTCASLAASAKRPLAIINHA 76
Query: 85 HLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG--LDPDSFTYPILLKACG 142
FN TF N++I + A + L+ + PD +T+ L+K C
Sbjct: 77 RRFFNATHTRDTFLCNSMIAAHFAARQFSQPFTLFRDLRRQAPPFTPDGYTFTALVKGCA 136
Query: 143 DLRQVKG----VHSLVVKSKDFNSVIHSL---TRLITFYCNFGDVKSAQLLFDQMTEKNV 195
R G +H +V+K N V L T L+ Y FG + SA+ +FD+M+ ++
Sbjct: 137 T-RVATGEGTLLHGMVLK----NGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSK 191
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSG-VEVNELTLVSVLSACANLGASELGKWVHE 254
V+WTA+I G+ + + E LF +M D V N + V C L A EL +E
Sbjct: 192 VSWTAVIVGYARCGDMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGL-AREL---FNE 247
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+N + ++ Y G +E A +F ++ EKNV TWN++IGG + +
Sbjct: 248 MRERNVVSWT-----SMVSGYCGNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHD 302
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCL 373
A+++F +MQ + ++P++VT++ VL A + G ++ G+ I + +R+ K++ + + L
Sbjct: 303 ALELFREMQTASVEPNEVTVVCVLPAVADLGALDLGRWIHRFALRK--KLDRSARIGTAL 360
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+D+ + + +A M E W +L+ A
Sbjct: 361 IDMYAKCGEITKAKLAFEGMT-ERETASWNALINGFA 396
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 265/461 (57%), Gaps = 13/461 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQII 92
LP+ ++ ++ K++H ++ F SD +A + + YA VF +
Sbjct: 407 LPVCEEEIQFLKLKEIHGYALRHGFIQ---SDELVANAFVAGYAKCGSLHYAEGVFCGME 463
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
+ ++N +I G+ + G + + LY M G+GL+PD FT LL AC L+ + K
Sbjct: 464 SKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKE 523
Query: 150 VH-SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
+H S++ + + I L++ Y G + A+L FD M EKN+V W MING +
Sbjct: 524 IHGSMLRNGFELDEFI--CISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQN 581
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ + +D+F +M S + +E++++ L AC+ + A LGK +H F K+ + + +
Sbjct: 582 EFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVT 641
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+L DMYAKCG +E++ +F V K TWN +I G IHG G +A+++F MQ +G +
Sbjct: 642 CSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFR 701
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD VT IA+LTAC+HAGL+ +G E M+ + ++P ++HY C+VD+L RA L+EA E
Sbjct: 702 PDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALE 761
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
++ +P +P++ +W SLL++C + D +++ E +L++L P NYVL+SN YA
Sbjct: 762 LVNELPDKPDSRIWSSLLSSCRNYRD---LDIGEKVANKLLELGPDKAENYVLISNFYAR 818
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGD 489
+WD+ KMR+ MKE + K+ GCS IEI V F+VGD
Sbjct: 819 LGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGD 859
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 149/284 (52%), Gaps = 10/284 (3%)
Query: 86 LVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKAC--- 141
LVFN + F +N ++ GY L + ++ +MI PD+FT P ++KAC
Sbjct: 150 LVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGV 209
Query: 142 GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
D+R + VH +K+K + V LI Y FG V+SA +FD+M ++N+V+W ++
Sbjct: 210 YDVRLGEAVHGFALKTKVLSDVFVG-NALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSV 268
Query: 202 INGHVKQKNYREGIDLFRKM--RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
+ ++ + E LF+ + D G+ + T+V+V+ CA G LG H K
Sbjct: 269 MYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKL 328
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ K+ ++L DMY+KCGY+ EA RV EKNV +WNS+IGG + A ++
Sbjct: 329 GLCGELKVNSSLLDMYSKCGYLCEA-RVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELL 387
Query: 320 WQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDY 361
+MQM +K ++VTL+ VL C K KEI Y +R +
Sbjct: 388 RKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGF 431
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 155/310 (50%), Gaps = 23/310 (7%)
Query: 136 ILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
+LL+ CG+ + + + +H+ + S F + + +TRL+T Y + L+F+
Sbjct: 98 LLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRR 157
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV-NELTLVSVLSACANLGASELGKW 251
KN+ W A+++G+++ +R+ + +F +M V + TL V+ AC + LG+
Sbjct: 158 KNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEA 217
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
VH F K ++ + +G AL MY K G++E A++VF + ++N+ +WNS++ +G
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277
Query: 312 GEEAVKMFWQMQMS--GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
EE+ +F + G+ PD T++ V+ C+ G + G +F+ + + +K
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM-VFHGLALKLGLCGELKV 336
Query: 370 YGCLVDL------LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD--GANVELA 421
L+D+ LC AR+L + E N + W S++ + D GA L
Sbjct: 337 NSSLLDMYSKCGYLCEARVLFDTN--------EKNVISWNSMIGGYSKDRDFRGAFELLR 388
Query: 422 EIAMERLIKL 431
++ ME +K+
Sbjct: 389 KMQMEDKVKV 398
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/456 (36%), Positives = 268/456 (58%), Gaps = 11/456 (2%)
Query: 65 DTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
D + L+ N A VF+ I ++N +++ Y AG+ +++ MI
Sbjct: 151 DHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMAADVARMFRDMID 210
Query: 125 NG-LDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGD 179
G + P+ T ++L AC GDL + + V ++ + S++ S L+ Y G+
Sbjct: 211 EGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGSA--LVGMYEKCGE 268
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
+ A+ +FD + K+VV W AMI G+ + +E I LF MR G +++TLV VLSA
Sbjct: 269 MTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSA 328
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
CA +GA ELG + + + + N +G AL DMY+KCG +++A++VF + KN TW
Sbjct: 329 CAAVGALELGTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEATW 388
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
N++I GLA +G G EA++ F M+ G++PDD+T I VL+AC HAGL++ G+ F ++
Sbjct: 389 NALICGLAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWFNSLT 448
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
++++ P ++HY C+VDLL RA L+EA++ + +P + +AV+ G+LL AC NV
Sbjct: 449 SEFQIIPKIEHYSCMVDLLARAGHLEEAWDFVEKIPGKADAVMLGALLAACRKCK---NV 505
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
E++E + R+++LEP N NYV+ S IYA+ + DD+ KMR LM+ER + K PGCS +E+
Sbjct: 506 EVSERVINRIMQLEPSNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVSKIPGCSWVEV 565
Query: 479 NDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ V EF GD ++++Y + + + +R E Y
Sbjct: 566 SGKVLEFYAGDESQHGADDMYQLHDMLIDEMRLEGY 601
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 175/323 (54%), Gaps = 12/323 (3%)
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ---VKGV 150
P+ F++N +R +A ++L+ +M+ L PD++T P LL A + +
Sbjct: 80 PTAFSYNVTLRFFAST-RPRTALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFARSA 138
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H+L+ + + H++ L+T Y N GD +A+ +FD + ++VV+W AM+ + +
Sbjct: 139 HALLCR-LGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGM 197
Query: 211 YREGIDLFRKMRDSG-VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ +FR M D G V NE+T+ VL+AC + G LG+W+ E+V I + +G+
Sbjct: 198 AADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGS 257
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL MY KCG + EA RVF + K+V WN++I G A +G +EA+ +F M+ G P
Sbjct: 258 ALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASP 317
Query: 330 DDVTLIAVLTACSHAGLIEKGKEI--FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
D +TL+ VL+AC+ G +E G E+ + + R Y NV LVD+ + LD+A
Sbjct: 318 DKITLVGVLSACAAVGALELGTELDAYASHRGLYG---NVYVGTALVDMYSKCGDLDKAV 374
Query: 388 EVIRNMPMEPNAVLWGSLLTACA 410
+V +P + N W +L+ A
Sbjct: 375 QVFGKLPCK-NEATWNALICGLA 396
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 277/485 (57%), Gaps = 14/485 (2%)
Query: 36 LLQKCTHLVQFKQ---VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL++CT L + K+ VH ++ ++F + + L + + A +F+++
Sbjct: 80 LLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMY---ARCGSLEGARRLFDEMP 136
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
+ ++ ++I GYA+ + L+ +M+ +G +P+ FT L+K CG + +
Sbjct: 137 HRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQ 196
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H+ K ++V + L+ Y G + A L+FD++ KN V+W A+I G+ ++
Sbjct: 197 IHACCWKYGCHSNVFVG-SSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKG 255
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E + LF +M+ G E T ++LS+C+++G E GKW+H + K+ L +G
Sbjct: 256 EGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGN 315
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
L MYAK G I +A +VF +++ +V + NS++ G A HG G+EA + F +M GI+P
Sbjct: 316 TLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEP 375
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
+D+T ++VLTACSHA L+++GK F MR+ Y +EP V HY +VDLL RA LLD+A
Sbjct: 376 NDITFLSVLTACSHARLLDEGKHYFGLMRK-YNIEPKVSHYATIVDLLGRAGLLDQAKSF 434
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I MP+EP +WG+LL A + N E+ A +R+ +L+P G + L++NIYA+
Sbjct: 435 IEEMPIEPTVAIWGALLGA---SKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASA 491
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+W+D K+R++MK+ + K P CS +E+ + VH F+ D HP E+I+ M E + +
Sbjct: 492 GRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKI 551
Query: 510 REECY 514
+E Y
Sbjct: 552 KEIGY 556
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 46/347 (13%)
Query: 127 LDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSA 183
L+PD Y LLK C G L++ K VH V+ S +F + L+ Y G ++ A
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNS-NFKHDLVIQNSLLFMYARCGSLEGA 128
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
+ LFD+M +++V+WT+MI G+ + + + LF +M G E NE TL S++ C +
Sbjct: 129 RRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM 188
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
+ G+ +H K N +G++L DMYA+CGY+ EA+ VF + KN +WN++I
Sbjct: 189 ASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALI 248
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD--- 360
G A G GEEA+ +F +MQ G +P + T A+L++CS G +E+GK + ++ +
Sbjct: 249 AGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQK 308
Query: 361 ------------YKVEPNVKHYGCLVDLL-------CRARLLDEAY------------EV 389
Y +++ + D L C + L+ A E+
Sbjct: 309 LVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEM 368
Query: 390 IRNMPMEPNAVLWGSLLTACASA---DDGANVELAEIAMERLIKLEP 433
IR +EPN + + S+LTAC+ A D+G + + R +EP
Sbjct: 369 IR-FGIEPNDITFLSVLTACSHARLLDEGKHY----FGLMRKYNIEP 410
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 172/478 (35%), Positives = 272/478 (56%), Gaps = 41/478 (8%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
+ + C + K +HA +A+ + + ++ + N + YA +F+QI P+
Sbjct: 1 MAEACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGC-LHYADRLFSQIHQPN 59
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR-------QVK 148
TF +NT+IRGY+++ + +QL+ QM N +DPD FT+ LLK +R
Sbjct: 60 TFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASD 119
Query: 149 GVHSLVVKSKD------FNSVIH------------------------SLTRLITFYCNFG 178
+H V+K N++IH S + L+ + G
Sbjct: 120 EIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAG 179
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
+++ A+ +F +M E++VV+WT M++G+ + K RE ++LFR+MRD GV +E+ +VSV+S
Sbjct: 180 ELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVIS 239
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
AC +LG E G VH ++++N L AL DMYAKCG ++ A +VF + K++ T
Sbjct: 240 ACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLIT 299
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
WNS+I A HG E+A ++F M SGI+PD VT +A+LTA +H G ++ G +F +M+
Sbjct: 300 WNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQ 359
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
RDY VE V+HYGC+VD+L RA L+EAY++I +M M N V+WG+LL AC D V
Sbjct: 360 RDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGD---V 416
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
E+ E +++LI+L+P G Y+L+ +IY A + +A ++RR M K GCS +
Sbjct: 417 EMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 474
>gi|10178273|emb|CAC08331.1| putative protein [Arabidopsis thaliana]
Length = 1280
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 168/462 (36%), Positives = 274/462 (59%), Gaps = 40/462 (8%)
Query: 78 SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPIL 137
+S + YA+ +++ +P + +N VIRG++ + + I +Y QM+ GL PD TYP L
Sbjct: 801 TSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFL 860
Query: 138 LKACGDL--RQVKG-VHSLVVKS--------------------------KDFNSVIH--- 165
+K+ L R++ G +H VVKS K F+ + H
Sbjct: 861 MKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNL 920
Query: 166 -SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-RD 223
+ ++ Y GDV SA+L+FD+M+E++VVTW++MI+G+VK+ Y + +++F +M R
Sbjct: 921 VTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRM 980
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
+ NE+T+VSV+ ACA+LGA GK VH ++ + L L +L DMYAKCG I +
Sbjct: 981 GSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGD 1040
Query: 284 ALRVF--KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
A VF V E + WN+IIGGLA HG E++++F +M+ S I PD++T + +L AC
Sbjct: 1041 AWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAAC 1100
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SH GL+++ F +++ + EP +HY C+VD+L RA L+ +A++ I MP++P +
Sbjct: 1101 SHGGLVKEAWHFFKSLK-ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSM 1159
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
G+LL C + N+ELAE ++LI+L+P NDG YV ++N+YA Q+ A MR
Sbjct: 1160 LGALLNGCI---NHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREA 1216
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
M+++ + K G S+++++ H F+ D H S++IY++L+
Sbjct: 1217 MEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQ 1258
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 122/247 (49%), Gaps = 11/247 (4%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD-P 129
++++ S + A LVF+++ ++++I GY + G ++ ++++ QM+ G
Sbjct: 926 ILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKA 985
Query: 130 DSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
+ T ++ AC G L + K VH ++ +VI T LI Y G + A +
Sbjct: 986 NEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQ-TSLIDMYAKCGSIGDAWSV 1044
Query: 187 FDQMT--EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
F + + E + + W A+I G RE + LF KMR+S ++ +E+T + +L+AC++ G
Sbjct: 1045 FYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGG 1104
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
+ + + ++ + A + D+ ++ G +++A + E + S++G
Sbjct: 1105 LVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDA---HDFISEMPIKPTGSMLG 1161
Query: 305 GLAIHGC 311
L ++GC
Sbjct: 1162 AL-LNGC 1167
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 147/347 (42%), Gaps = 27/347 (7%)
Query: 67 QLAKLIESLVNSSQIAYAHLVFNQIIN----PSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
L+ +I LV ++++ A + + I+ P +N +I G + G ++L +M
Sbjct: 441 SLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM 500
Query: 123 IGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSK--DFNSVIHSLTRLITFYCNFGDV 180
G++P FT + + G L+ K + F I T L+ C G
Sbjct: 501 KDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRA 560
Query: 181 KSAQLLFDQMTEK----NVVTWTAMINGHVKQKNYREGIDLFRKMRDSG----VEVNELT 232
A D + + ++V TA I+G +K + G++LFR + +G V +
Sbjct: 561 VDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVL 620
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA--ALTDMYAKCGYIEEAL----R 286
+ ++ AC + A L +E V+K L + ++ D + K G I+ L R
Sbjct: 621 IKALCKACRTMEADIL---FNEMVSKG---LKPTVATYNSMIDGWCKEGEIDRGLSCIVR 674
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
+++ +V T+ S+I GL G EA+ + +M+ P+ +T +A++ G
Sbjct: 675 MYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGW 734
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
+ F M + ++EP+ Y LV + ++ + + R M
Sbjct: 735 SGEALVYFREM-EEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREM 780
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 141/355 (39%), Gaps = 60/355 (16%)
Query: 91 IINP--STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK 148
I++P +T TV+ G+ GL + ++ G D + Y + RQ
Sbjct: 66 ILSPELNTKVVETVLNGFKRWGLAYLFFNWASKQ--EGYRNDMYAYNAMASILSRARQNA 123
Query: 149 GVHSLVV---KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE-----KNVVTWTA 200
+ +LVV S+ F S + I N G V A +FD++ E N T+
Sbjct: 124 SLKALVVDVLNSRCFMSP-GAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNC 182
Query: 201 MINGHVKQKNYREGIDL----FRKMRDSGVEVNELTLVSVLSACANLGASE--------- 247
++ K + ++L ++MRD G ++ TL VL N G SE
Sbjct: 183 LLEAISKSNS--SSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEI 240
Query: 248 -----------------LGKW--------VHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
KW + E + + I LN K L + K I+
Sbjct: 241 LSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRID 300
Query: 283 EALRVF----KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
+A ++F ++ + ++ ++ +IGGL H E A+ ++ +++ SGI PD L +L
Sbjct: 301 KAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLL 360
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
+ S + + E+ D + + Y L + R L+ EAY I+N+
Sbjct: 361 CSFSEESELSRITEVIIG---DIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNL 412
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 150/376 (39%), Gaps = 80/376 (21%)
Query: 71 LIESLVNSSQIAYAHLVFNQIIN----PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG 126
LI++L + + A ++FN++++ P+ +N++I G+ + G RG+ +M +
Sbjct: 620 LIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDE 679
Query: 127 LDPDSFTYPILLKA-CGDLRQVKGVHSL-VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQ 184
+PD TY L+ C R + + +K KD + LI C G A
Sbjct: 680 KNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEAL 739
Query: 185 LLFDQMTEKNV----VTWTAMINGHVKQKNYREGIDLFRKMRDSG-----VEVNELTLVS 235
+ F +M EK + + ++++ + +N G +FR+M G V+ N + V+
Sbjct: 740 VYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVN 799
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
V S + ++F++K L+D
Sbjct: 800 VTSDV---------DYAYKFLSK----LSDPPNYG------------------------- 821
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS-----------HA 344
WN +I G + E+++ ++ QM G+ PD +T ++ + S H
Sbjct: 822 ---WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHC 878
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
+++ G E +++ + + YG D +L DE MP N V W S
Sbjct: 879 SVVKSGLE--WDL---FICNTLIHMYGSFRDQASARKLFDE-------MP-HKNLVTWNS 925
Query: 405 LLTACASADDGANVEL 420
+L A A + D + L
Sbjct: 926 ILDAYAKSGDVVSARL 941
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 127/293 (43%), Gaps = 34/293 (11%)
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKS 157
+ +I G+ + + QL+ +M G++ D Y +L+ + ++ SL ++
Sbjct: 285 TYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEI 344
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN----YRE 213
K + + L C+F + E + T +I G + +K+ Y+
Sbjct: 345 KR-SGIPPDRGILGKLLCSFSE------------ESELSRITEVIIGDIDKKSVMLLYKS 391
Query: 214 GIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTD 273
+ F +R+ V + +++ + G SE+ K + + NK + +D L + + +
Sbjct: 392 LFEGF--IRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDH-NKAILPDSDSL-SIVIN 447
Query: 274 MYAKCGYIEEALRVFKIVLEKNVCT----WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
K ++ A+ + +++ + +N+II G+ G EE++K+ +M+ +G++P
Sbjct: 448 CLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEP 507
Query: 330 DDVTLIAVLTA----CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
TL + C G ++ K++ R Y EP +KH LV LC
Sbjct: 508 SQFTLNCIYGCLAERCDFVGALDLLKKM-----RFYGFEPWIKHTTFLVKKLC 555
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 56/225 (24%)
Query: 56 ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRG 115
AS +R + L L+ ++NS ++P F F IR AGL
Sbjct: 113 ASILSRARQNASLKALVVDVLNS----------RCFMSPGAFGF--FIRCLGNAGLVDEA 160
Query: 116 IQLYTQMIGNGL-DPDSFTYPILLKA---------------------CG------DLRQV 147
++ ++ GL P+++TY LL+A CG L V
Sbjct: 161 SSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPV 220
Query: 148 KGVHSLVVKSKD----FNSVI-------HSLTRLITFYCNFGDVKSAQLLFDQMTEK--- 193
V+ KS+ FN ++ H T L+ +C +G V A L + + E+
Sbjct: 221 LQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIR 280
Query: 194 -NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
N T+ +I+G VK+ + LF KMR G+ ++ L VL
Sbjct: 281 LNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNA-DIALYDVL 324
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 280/531 (52%), Gaps = 63/531 (11%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP L + +HL + +HA ++ R S + LA + SL +S+ ++YA LV Q
Sbjct: 1218 LPSLAEASHL---RALHAHLV---VSGRLASPSHLAAFLASLASSNHLSYARLVLPQ--R 1269
Query: 94 PSTF-AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA------------ 140
P+T A N IR A G R + L PD ++ L++A
Sbjct: 1270 PATLLAHNAFIRALAR---GPRPCLAFAAFRDLPLPPDHYSLNFLVRAATALVASAAEEK 1326
Query: 141 ------------------------CGDLRQVKGVHSLVVKSKDFNSV-----------IH 165
D GV S+ D S +
Sbjct: 1327 HVSAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPDVV 1386
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
+T ++ GDV +A+ LFD M +++ V W+AMI G++ RE + LF +M +G
Sbjct: 1387 CVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAG 1446
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
V E TLVSVL+ACA +G + GKWVH +V + ++ KLG AL DMY+KCG + A+
Sbjct: 1447 TTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAM 1506
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
VF+ + E+NV TW S + GLA++G G E +++F +M+ +GI+P+ V+ +AVL CS AG
Sbjct: 1507 EVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAG 1566
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
L+++G+ F +M + Y V+P +HYGC+VDL RA LD+A I +MPMEP+ +WG+L
Sbjct: 1567 LVDEGRACFDSMDK-YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGAL 1625
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L A + +V+L + A+++L+ +E ND +V +SNIYA W ++R +MK +
Sbjct: 1626 LNASRIHN---SVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAK 1682
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
+ K PG S IE++ VHEF VG HP EI ML + LR + Y A
Sbjct: 1683 GVKKVPGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTA 1733
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 252/461 (54%), Gaps = 42/461 (9%)
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ- 146
NQ + + ++ + I G + ++ M G++P+ T+ LL CGD
Sbjct: 17 LNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSG 76
Query: 147 ------------------------------VKGVHSLVVKSK-------DFNSVIHSLTR 169
+ HS V K++ D NSV +
Sbjct: 77 SEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSV--TWNT 134
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
+I Y G V +A +FD+M E+++++WTAMING VK+ + E + FR+M+ SGV+ +
Sbjct: 135 MIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPD 194
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
+ +++ L+AC NLGA G WVH +V N K+ +L D+Y +CG +E A VF
Sbjct: 195 YVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFD 254
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ ++ V +WNS+I G A +G E++ F +MQ G KPD VT LTACSH GL+E+
Sbjct: 255 KMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEE 314
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
G F M+RD+++ P ++HYGCLVDL RA L+EA +V+++MPM+PN V+ GSLL AC
Sbjct: 315 GLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVIGSLLAAC 374
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
+ G N LAE M+ L + NYV++SN+YAA +W+ A +MRR MK + K
Sbjct: 375 RT--HGNNTVLAERLMKHLSDVNVKGHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKK 432
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
PG S IEI+D H FM GD H + +I +LE V+ L+
Sbjct: 433 QPGFSSIEIDDCTHVFMAGDSAHVETADIREVLELVSSDLQ 473
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 288/512 (56%), Gaps = 27/512 (5%)
Query: 11 LTHFTNSANSHKNSNTAT---KSHHHLPL-----------LQKCTHLVQFKQVHAQIIKA 56
LT F NS+N + A K H+ L + CT + +HA++IK+
Sbjct: 109 LTSFPNSSNDSTRTKVAVFLGKLHNSSLLADSIVQSLVFAISSCTSVSYCSAIHARVIKS 168
Query: 57 -SFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRG 115
++ + I D +L+ A +F+++ N ++N+++ G + G
Sbjct: 169 LNYSDGFIGD----RLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGAC 224
Query: 116 IQLYTQM-IGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLI 171
+ + +M +G P+ T ++ AC G L + K +H +VVK + + LI
Sbjct: 225 LNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVK-LGMSGKAKVVNSLI 283
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
Y G + +A LF++M +++V+W +M+ H +G+DLF M+ +G+ ++
Sbjct: 284 NMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQA 343
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
T+V++L AC + G + +H ++++ + + AL ++YAK G + + +F+ +
Sbjct: 344 TMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEI 403
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
+++ W +++ G A+H CG EA+K+F M G++ D VT +L+ACSH+GL+E+GK
Sbjct: 404 KDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGK 463
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
+ F M Y+VEP + HY C+VDLL R+ L++AYE+I++MPMEP++ +WG+LL AC
Sbjct: 464 KYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRV 523
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNP 471
NVEL + E+L+ L+P + NY+++SNIY+A W A K+R LMKER + +NP
Sbjct: 524 Y---GNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNP 580
Query: 472 GCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
GCS IE + +H F+VGD HP S+EI++ LE
Sbjct: 581 GCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLE 612
>gi|224058579|ref|XP_002299552.1| predicted protein [Populus trichocarpa]
gi|222846810|gb|EEE84357.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 179/489 (36%), Positives = 275/489 (56%), Gaps = 49/489 (10%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LL+ C +F Q+HA++ K F ++ T+L S+ + I YA +FN N
Sbjct: 29 LSLLEICKFTTEFAQLHARLTKLGFIKNPLALTRLL-CYSSISQYANINYAQSIFNFDKN 87
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKACGDLRQV---KG 149
P+TFA+N +IRGYA+ + L+ M+ N + T+P +LKAC +R + K
Sbjct: 88 PNTFAYNVMIRGYAQREKPENALSLFYSMLCNANSGQNKLTFPFVLKACSQVRAIEEGKQ 147
Query: 150 VHSLVVK---SKDF---NSVI--HSLTRLITFYC----------------------NFGD 179
VH LV K S+D NS+I +S LI F C + G
Sbjct: 148 VHGLVFKHGLSEDLFVQNSLISMYSSCGLIGFACQVFNKIDDPDVVSWNSMISGLVDLGF 207
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
V+ + +FD+M+++++VTW +I+G+VK E +LF +MR T+VSVL+A
Sbjct: 208 VEEGKQMFDRMSKRSLVTWNCLIDGYVKAGLLMEARELFDQMR--------FTMVSVLTA 259
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
C+ LGA E G+W+ + KN I +N LG AL +M+AKCG IE AL VFK + E++V W
Sbjct: 260 CSYLGALEQGEWMQAHIEKNGIDVNSVLGTALVEMFAKCGSIERALSVFKSIEERDVGAW 319
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
NSII LA HG G+EA +F M S D + + +L+ C H GL+++GK F M
Sbjct: 320 NSIIHKLAAHGHGQEAFAIFSDMLRSNTLLDGIIFLGLLSVCRHLGLVDEGKRFFQLMSE 379
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN---MPMEPNAVLWGSLLTACASADDGA 416
+Y + P V+HYGC+VDLLC A LL+EA ++I + M+ + +WG+LL
Sbjct: 380 EYGLVPKVEHYGCMVDLLCHADLLEEARDLIDSSHASQMKSSVPMWGALLGVSCQLK--- 436
Query: 417 NVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
N+ + E A + L++L+PF+ Y ++SN+Y+A ++ A ++R MK++ + K PG S +
Sbjct: 437 NIVMGEYAAKHLLQLDPFDGNCYTVLSNLYSAAGLYEKAIEVRNEMKKQGLEKIPGSSSM 496
Query: 477 EINDVVHEF 485
EI+ +V +F
Sbjct: 497 EIDGLVLDF 505
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 172/515 (33%), Positives = 292/515 (56%), Gaps = 18/515 (3%)
Query: 1 MLKQLVPNSQLTH-FTNSANSHKNSNTATKSHHHLPLLQKCT---HLVQFKQVHAQIIKA 56
M+K V Q + F + +N++ S L + C + + +++H+ ++
Sbjct: 232 MIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAV 291
Query: 57 SFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
F + L++ ++ A +F+++I+ S ++ +I GY +G
Sbjct: 292 GF---CLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAG 348
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN 176
+L+ QMI + DS + ++ A L + L + + + V S T +I Y +
Sbjct: 349 KLFDQMI----EKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVV--SWTIMIYGYSS 402
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS-GVEVNELTLVS 235
G++ SA+ LFD M EKN+ +W AMI+G+ + K E + LF +M+ + +E +E+T+VS
Sbjct: 403 NGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEVTIVS 462
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
VL A A+LGA +LG WVH FV + + +G AL DMYAKCG I ++ VF + EK
Sbjct: 463 VLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKE 522
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
+WN++I AI+G +EA+ +F +M G P+++T+I VL+AC+H+GL+E+GK F
Sbjct: 523 TASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFK 582
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
M ++ + P ++HYGC+VDLL RA L EA +++ +MP E N ++ S L AC + D
Sbjct: 583 AM-EEFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKD- 640
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
V AE ++ IK+E +NDGNY+++ N+YA + +W +A +++ LM+ + K GCS
Sbjct: 641 --VARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSA 698
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
IE++ V EF+ GD HP E I+S+L + + ++
Sbjct: 699 IEVDSRVWEFVAGDRVHPKWEAIHSVLGQLWVHMK 733
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 191/393 (48%), Gaps = 30/393 (7%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDN------RTISDTQLAKLIESLVNS-SQIAYAHL 86
L LLQ+ Q+HA +++ + + + I+ L+ L + + I +A
Sbjct: 156 LSLLQQSKTRANLLQIHAFMLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARR 215
Query: 87 VFNQIIN-PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKACG-- 142
+F+ + F N++I+ Y LY + N PDSFT+ +L K+C
Sbjct: 216 MFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALN 275
Query: 143 -DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
+ + + +HS VV + F +++ T L+ Y FG + A+ LFD+M +++ V+WTA+
Sbjct: 276 MAIWEGQEIHSHVV-AVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTAL 334
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
I G+V+ + LF +M +E + +++ A LG + + + + + +
Sbjct: 335 IGGYVRSGDMDNAGKLFDQM----IEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSV 390
Query: 262 ILNDKLGAALTDM---YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+ + T M Y+ G ++ A +F + EKN+ +WN++I G + EA+K+
Sbjct: 391 V-------SWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKL 443
Query: 319 FWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL 377
F +MQ + ++PD+VT+++VL A + G ++ G + +RR K++ L+D+
Sbjct: 444 FHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRK-KLDRATNVGTALIDMY 502
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ + ++ V NMP E W +L+ A A
Sbjct: 503 AKCGEIVKSRGVFDNMP-EKETASWNALINAFA 534
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 257/461 (55%), Gaps = 11/461 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+Q+HA +I+A + +T + + V + A VF+Q+ A+ ++ GY
Sbjct: 202 RQIHAHVIRAGLCSNASIETGIVNM---YVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGY 258
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSV 163
+AG ++L+ +I G++ DSF + ++LKAC L ++ K +H+ V K
Sbjct: 259 TQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAK-LGLECE 317
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ T L+ FY +SA F ++ E N V+W+A+I+G+ + + E + F+ +R
Sbjct: 318 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 377
Query: 224 -SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ V +N T S+ AC+ L +G VH K +I + +AL MY+KCG ++
Sbjct: 378 KNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLD 437
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+A VF+ + ++ W + I G A +G EA+++F +M G+KP+ VT IAVLTACS
Sbjct: 438 DAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACS 497
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
HAGL+E+GK M R Y V P + HY C++D+ R+ LLDEA ++NMP EP+A+ W
Sbjct: 498 HAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSW 557
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
L+ C + N+EL +IA E L +L+P + YVL N+Y +W++A ++ +LM
Sbjct: 558 KCFLSGCWTHK---NLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLM 614
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
ER + K CS I+ +H F+VGD HP S+EIY L+
Sbjct: 615 NERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLK 655
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 160/333 (48%), Gaps = 11/333 (3%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A +F+++ + + + T+I YAE GL + + L+++M+ +G P S Y LLK+ +
Sbjct: 135 ADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVN 194
Query: 144 LRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
R + + +H+ V+++ S T ++ Y G + A+ +FDQM K V WT
Sbjct: 195 PRALDIGRQIHAHVIRA-GLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTG 253
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
++ G+ + R+ + LF + GVE + VL ACA+L GK +H V K
Sbjct: 254 LMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLG 313
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ +G L D Y KC E A R F+ + E N +W++II G EEAVK F
Sbjct: 314 LECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFK 373
Query: 321 QMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG--CLVDLL 377
++ + + + T ++ ACS G ++ + + + YG L+ +
Sbjct: 374 SLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG---SQYGESALITMY 430
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ LD+A+EV +M P+ V W + ++ A
Sbjct: 431 SKCGCLDDAHEVFESMD-NPDIVAWTAFISGHA 462
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 142/299 (47%), Gaps = 6/299 (2%)
Query: 113 HRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTR 169
+ + + +M G+ ++Y L +AC +LR + + +H+ + + SV+
Sbjct: 63 NEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQ-NC 121
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
++ YC G ++ A LFD+M++ N V+ T MI+ + +Q + + LF +M +SG +
Sbjct: 122 VLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPP 181
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
++L + N A ++G+ +H V + + N + + +MY KCG++ A RVF
Sbjct: 182 SSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFD 241
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ K W ++ G G +A+K+F + G++ D VL AC+ +
Sbjct: 242 QMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRF 301
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
GK+I + + +E V LVD + + A + + EPN V W ++++
Sbjct: 302 GKQIHACVAK-LGLECEVSVGTPLVDFYIKCSSFESACRAFQEI-REPNDVSWSAIISG 358
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 72/153 (47%)
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
K E + F++M +GV V+ + + AC L + G+ +H + +
Sbjct: 58 KHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVL 117
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
L + MY +CG +E+A ++F + + N + ++I A G ++AV +F +M SG
Sbjct: 118 LQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESG 177
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
KP +L + + ++ G++I ++ R
Sbjct: 178 DKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIR 210
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 172/439 (39%), Positives = 258/439 (58%), Gaps = 35/439 (7%)
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL---KACGDLR 145
N ++P F ++ + G + + Q++ GLD D F LL +CGDLR
Sbjct: 55 NHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLR 114
Query: 146 QVKGVHSLVVKSKD---FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
+ V SKD +NSV+++ Y G + A+ LFD+M E+NV++W+ +I
Sbjct: 115 SAQRVFD-DSGSKDLPAWNSVVNA-------YAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 203 NGHVKQKNYREGIDLFRKMR-----DSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
NG+V Y+E +DLFR+M+ ++ V NE T+ +VLSAC LGA E GKWVH +++
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSIIGGLAIHGCGEEAV 316
K + ++ LG AL DMYAKCG +E A RVF + +K+V ++++I LA++G +E
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF 286
Query: 317 KMFWQMQMS-GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
++F +M S I P+ VT + +L AC H GLI +GK F M ++ + P+++HYGC+VD
Sbjct: 287 QLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVD 346
Query: 376 LLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN 435
L R+ L+ EA I +MPMEP+ ++WGSLL+ D ++ E A++RLI+L+P N
Sbjct: 347 LYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGD---IKTCEGALKRLIELDPMN 403
Query: 436 DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
G YVL+SN+YA +W + I K PGCS +E+ VVHEF+VGD S
Sbjct: 404 SGAYVLLSNVYAKTGRWMEG-----------INKVPGCSYVEVEGVVHEFVVGDESQQES 452
Query: 496 EEIYSMLEYVAISLREECY 514
E IY+ML+ + LRE Y
Sbjct: 453 ERIYAMLDEIMQRLREAGY 471
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 155/468 (33%), Positives = 262/468 (55%), Gaps = 10/468 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQ+H+Q+I+ F +T ++ + V + A + N++ + A ++ GY
Sbjct: 212 KQIHSQLIRIGFAANISIETLISNM---YVKCGWLDGAEVATNKMTRKNAVACTGLMVGY 268
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSV 163
+A + L+ +MI G++ D F + I+LKAC GDL K +HS +K S
Sbjct: 269 TKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIK-LGLESE 327
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ T L+ FY ++A+ F+ + E N +W+A+I G+ + + +++F+ +R
Sbjct: 328 VSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRS 387
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
GV +N ++ AC+ + G +H K ++ +A+ MY+KCG ++
Sbjct: 388 KGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDY 447
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A + F + + + W +II A HG EA+++F +MQ SG++P+ VT I +L ACSH
Sbjct: 448 AHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSH 507
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
+GL+++GK+I +M +Y V P + HY C++D+ RA LL EA EVIR++P EP+ + W
Sbjct: 508 SGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWK 567
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
SLL C S N+E+ IA + + +L+P + YV+M N+YA +WD+A + R++M
Sbjct: 568 SLLGGCWSH---RNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMA 624
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
ERN+ K CS I + VH F+VGD HP +E+IYS L+ + S ++
Sbjct: 625 ERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNFSFKK 672
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 162/346 (46%), Gaps = 8/346 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A F++I++ +++T+I Y E G ++L+ +M+ G+ P+S + L+ + D
Sbjct: 145 AERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTD 204
Query: 144 ---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
L K +HS +++ F + I T + Y G + A++ ++MT KN V T
Sbjct: 205 PSMLDLGKQIHSQLIRI-GFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTG 263
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
++ G+ K R+ + LF KM GVE++ +L ACA LG GK +H + K
Sbjct: 264 LMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLG 323
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ +G L D Y KC E A + F+ + E N +W+++I G G + A+++F
Sbjct: 324 LESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFK 383
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
++ G+ + + ACS + G +I + + V + ++ + +
Sbjct: 384 AIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLV-AYLSGESAMISMYSKC 442
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
+D A++ + +P+ V W +++ CA A G E + E
Sbjct: 443 GQVDYAHQAFLTID-KPDTVAWTAII--CAHAYHGKAFEALRLFKE 485
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 152/331 (45%), Gaps = 18/331 (5%)
Query: 123 IGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
+G ++P S+ Y L K CG L + K H+ + + + N I + ++ YC+
Sbjct: 86 VGISINPRSYEY--LFKMCGTLGALSDGKLFHNRLQRMANSNKFIDNC--ILKMYCDCKS 141
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
SA+ FD++ ++++ +W+ +I+ + ++ E + LF +M D G+ N +++ +
Sbjct: 142 FTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMS 201
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
+ +LGK +H + + N + +++MY KCG+++ A + KN
Sbjct: 202 FTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVAC 261
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMR 358
++ G +A+ +F +M G++ D +L AC+ G + GK+I Y ++
Sbjct: 262 TGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIK 321
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA-CASADDGAN 417
+ E +V LVD + + A + ++ EPN W +L+ C S
Sbjct: 322 LGLESEVSVG--TPLVDFYVKCARFEAARQAFESIH-EPNDFSWSALIAGYCQSGQFDRA 378
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
+E+ + + + L F + +NI+ A
Sbjct: 379 LEVFKAIRSKGVLLNSF------IYTNIFQA 403
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 168/491 (34%), Positives = 268/491 (54%), Gaps = 11/491 (2%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
H + + +L ++VHA + + F D L I + A VF++
Sbjct: 55 HTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSL---IHLYCKCGSVLEARKVFDE 111
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQV 147
+ ++ ++I GYA+ + I L M+ P+ FT+ LLKA G D
Sbjct: 112 MRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIG 171
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ +H+L VK D++ ++ + L+ Y G + A +FD++ KN V+W A+I+G +
Sbjct: 172 RQIHALAVKC-DWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFAR 230
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
+ + + F +M +G E T SV S+ A LGA E GKWVH + K+ +
Sbjct: 231 KGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFA 290
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
G L DMYAK G + +A +VF V +K++ TWN+++ A +G G+EAV F +M+ SGI
Sbjct: 291 GNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGI 350
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
+ VT + +LTACSH GL+++GK ++ M ++Y +EP + H+ +V LL RA LL+ A
Sbjct: 351 YLNQVTFLCILTACSHGGLVKEGKR-YFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFAL 409
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
I MP+EP A +WG+LL AC N ++ + A + + +L+P + G VL+ NIYA
Sbjct: 410 VFIFKMPIEPTAAVWGALLAACRMHK---NAKVGQFAADHVFELDPDDSGPPVLLYNIYA 466
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
+ QWD A ++RR+MK + K P CS +E+ + VH F+ D HP +EEIY M ++
Sbjct: 467 STGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISK 526
Query: 508 SLREECYAARM 518
+R+E Y M
Sbjct: 527 KIRKEGYVPDM 537
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 180/515 (34%), Positives = 278/515 (53%), Gaps = 48/515 (9%)
Query: 5 LVPNSQLTHFTNSANSHKNSNTATKSHHHLP--LLQKCTHLVQFKQVHAQIIKASFDNRT 62
++PN SA SH + H L L + ++V VH + +S N
Sbjct: 180 VIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNAR 239
Query: 63 ISDTQLAK--------LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHR 114
+ ++ + ++ S + A +F +I ++ T+I GY +
Sbjct: 240 VLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGE 299
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK----DF--NSVIH 165
+++Y M+ G+ P+ L+ ACG V + H ++V++ DF ++IH
Sbjct: 300 ALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIH 359
Query: 166 ------------------------SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
S LI+ + G ++ A+ LFD+M E++V +W++M
Sbjct: 360 FYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSM 419
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCI 261
I+G+ + + + LF +M GV+ NE+T+VSV SA A LG G+W HE++ N I
Sbjct: 420 ISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSI 479
Query: 262 ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK--NVCTWNSIIGGLAIHGCGEEAVKMF 319
LND L AAL DMYAKCG I AL++F + ++ +V WN+II GLA+HG ++K+F
Sbjct: 480 PLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLF 539
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
Q+Q IKP+ +T I VL+AC HAGL++ G++ F M+ Y +EPN+KHYGC++DLL R
Sbjct: 540 SQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGR 599
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
A L EA E+IR MPM+ + V+WG+LL AC + NVE+ E A E L KL+ +
Sbjct: 600 AGRLKEAAEMIRKMPMKADVVIWGTLLAACRTH---GNVEIGERAAENLAKLDISHGAGR 656
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
VL+SNIYA +WDDA +RR M+ + + K+PGCS
Sbjct: 657 VLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGCS 691
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/591 (18%), Positives = 232/591 (39%), Gaps = 133/591 (22%)
Query: 6 VPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLV---QFKQVHAQIIKASF---- 58
+P + H N +K++ + + L+ C+ L+ Q +Q+H+ + K+
Sbjct: 28 LPPHPIDHLRAFFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNI 87
Query: 59 -----------------DNRTISDT-------QLAKLIESLVNSSQIAYAHLVFNQIINP 94
+ R++ DT ++ V S + A +F ++
Sbjct: 88 FVKNSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIK 147
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKGVH 151
++ T++ G A+ I ++ M G+ P+ T ++ A G + + +H
Sbjct: 148 GCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLH 207
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ--- 208
+L K ++ T L+ YC + +A++LFD++ E+NVVTW M+NG+ K
Sbjct: 208 ALSFK-LGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLV 266
Query: 209 ----------------------------KNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
+ E + ++R M +GV NE+ +V ++SAC
Sbjct: 267 DLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISAC 326
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A G+ H + + D + A + YA CG I A F++ + +V +WN
Sbjct: 327 GRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWN 386
Query: 301 SIIGGLAIHGCGEE-------------------------------AVKMFWQMQMSGIKP 329
++I G +G E+ A+++F +M G++P
Sbjct: 387 ALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQP 446
Query: 330 DDVTLIAVLTACSHAGLIEKGK-----------------------------EIFYNMRRD 360
+++T+++V +A + G + +G+ I ++
Sbjct: 447 NEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLF 506
Query: 361 YKVEPNVKHYGCLVDLLC------RARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
Y+++ V ++C A + + + ++ + ++PN++ + +L+AC A
Sbjct: 507 YEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGL 566
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
E M+ L +EP N +Y M ++ + +A +M R M +
Sbjct: 567 VDTGEKYFKGMKNLYNIEP-NIKHYGCMIDLLGRAGRLKEAAEMIRKMPMK 616
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 261/463 (56%), Gaps = 10/463 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+++HAQ +K FD + LA + ++ Y +F ++ ++ T+I
Sbjct: 237 REIHAQAMKKGFDVSSFVANTLATMYN---KCGKLEYGLTLFEKMSMRDVVSWTTIITTL 293
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSV 163
+ G +Q + +M + + P+ +T+ ++ C +L +++ +H+L++ +
Sbjct: 294 VQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILH-LGLAAS 352
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ ++T Y G + S+ ++F +MT +++V+W+ +I G+ + + E +L MR
Sbjct: 353 LSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRM 412
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
G + E L SVLSAC N+ E GK +H +V + + +AL +MY KCG IEE
Sbjct: 413 EGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEE 472
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A R+F ++ +W ++I G A HG E + +F ++ G++PD VT I VL+ACSH
Sbjct: 473 ASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSH 532
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
AGL++ G F M + Y++ P+ +HYGC++DLLCRA L +A +I MP + V+W
Sbjct: 533 AGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWS 592
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL AC D VE ER+++LEP G ++ ++NIYA+K +W +A +R+LMK
Sbjct: 593 TLLRACRVHGD---VERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMK 649
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
+ ++K PG S I++ D+V F+ GD HP E+IY+ML+ +A
Sbjct: 650 SKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLA 692
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 159/314 (50%), Gaps = 13/314 (4%)
Query: 52 QIIKASFDNRT-----ISDTQLA---KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
Q+++ S DN + IS T L K ++ LV + + A +F+++ ++ T+I
Sbjct: 28 QVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLI 87
Query: 104 RGYAEAGLGHRGIQLYTQM-IGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKD 159
GY A + L+ M + +GL D F + KACG D+ + +H VK+
Sbjct: 88 SGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGL 147
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
NSV + L+ Y G + + +F +M +NVV+WTA+I G V+ +E + F
Sbjct: 148 VNSVFVG-SALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFS 206
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
+M S VE + T L ACA+ GA G+ +H K ++ + L MY KCG
Sbjct: 207 EMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCG 266
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
+E L +F+ + ++V +W +II L G E AV+ F +M+ S + P++ T AV++
Sbjct: 267 KLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVIS 326
Query: 340 ACSHAGLIEKGKEI 353
C++ IE G+++
Sbjct: 327 GCANLARIEWGEQL 340
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 173/495 (34%), Positives = 274/495 (55%), Gaps = 42/495 (8%)
Query: 49 VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE 108
VH +K F + L+ S ++ + + F+++ + ++N++I GYA+
Sbjct: 67 VHGVALKLGFVGQVFVAN---ALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQ 123
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKD------ 159
AG L+ +M G D FT LL AC G+L + VH L++ S
Sbjct: 124 AGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLIL 183
Query: 160 -------------------------FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
SV+ S T ++ G V +A+ FD M E+N
Sbjct: 184 GGALVDMYSKCGDLCMARRCFEMMPIKSVV-SWTSMLCAQTKHGSVDAARCWFDHMPERN 242
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
V+W MI+ +V++ Y E +DL+++M+ G +E TLV VLSAC +G +GK VH
Sbjct: 243 TVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHL 302
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
++ N + L +L DMYAKCG ++ A+R+F+ + +NV +WN IIGGLA+HG +
Sbjct: 303 YIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALD 362
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+ F M + PD +T +A+L++CSH GL+E G+ F +MR Y V+ V+HY C+V
Sbjct: 363 AITFFRSM-VRNTSPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYACMV 421
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
DLL R L++A +I+ MPM+P+ V+WG+LL AC NV++ + +++L++LE
Sbjct: 422 DLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIH---GNVKIGKQVIKQLLELEGI 478
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+ G +VL+SN+ QW+D ++R+LMKER K+ G S IEIN+ +HEF V D RH
Sbjct: 479 SGGLFVLISNLLYETNQWEDMKRLRKLMKERGTRKDMGVSSIEINNSIHEFGVEDIRHES 538
Query: 495 SEEIYSMLEYVAISL 509
S EIY++++ ++ L
Sbjct: 539 SSEIYAVVDQLSYHL 553
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 169/358 (47%), Gaps = 37/358 (10%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR- 145
+F+ I++P +NT+ R Y + ++L+ M+ G+ P+ FT P ++KAC +
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 146 --QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
VH + +K F + L+ Y + G + ++ FD+M +NVV+W +MI
Sbjct: 61 WDNALAVHGVALK-LGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIG 119
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
G+ + + RE LF +MR G +E TL S+L AC+ G E G+ VH + + +
Sbjct: 120 GYAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPV 179
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKI-------------------------------VL 292
+ LG AL DMY+KCG + A R F++ +
Sbjct: 180 DLILGGALVDMYSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMP 239
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
E+N +WN++I G EA+ ++ QMQ G PD+ TL+ VL+AC G + GK
Sbjct: 240 ERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKM 299
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ + RD P++ L+D+ + +D A + R M N V W ++ A
Sbjct: 300 VHLYI-RDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREM-CNRNVVSWNVIIGGLA 355
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 8/278 (2%)
Query: 186 LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGA 245
+FD + + + V + + + RE + L R M GV NE TL V+ AC A
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
+ VH K + + AL YA G + ++ R F + +NV +WNS+IGG
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGG 120
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
A G EA +F +M+ G D+ TL ++L ACS G +E G+ + + +
Sbjct: 121 YAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGR-LVHCLMLVSGSPV 179
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAM 425
++ G LVD+ + L A MP++ + V W S+L CA G+ V+ A
Sbjct: 180 DLILGGALVDMYSKCGDLCMARRCFEMMPIK-SVVSWTSML--CAQTKHGS-VDAARCWF 235
Query: 426 ERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+ + + N ++ M + Y + Q+ +A + + M+
Sbjct: 236 DHMPER---NTVSWNTMISCYVQRGQYHEALDLYKQMQ 270
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 261/463 (56%), Gaps = 10/463 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+++HAQ +K FD + LA + ++ Y +F ++ ++ T+I
Sbjct: 237 REIHAQAMKKGFDVSSFVANTLATMYN---KCGKLEYGLTLFEKMSMRDVVSWTTIITTL 293
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSV 163
+ G +Q + +M + + P+ +T+ ++ C +L +++ +H+L++ +
Sbjct: 294 VQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILH-LGLAAS 352
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ ++T Y G + S+ ++F +MT +++V+W+ +I G+ + + E +L MR
Sbjct: 353 LSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRM 412
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
G + E L SVLSAC N+ E GK +H +V + + +AL +MY KCG IEE
Sbjct: 413 EGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEE 472
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A R+F ++ +W ++I G A HG E + +F ++ G++PD VT I VL+ACSH
Sbjct: 473 ASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSH 532
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
AGL++ G F M + Y++ P+ +HYGC++DLLCRA L +A +I MP + V+W
Sbjct: 533 AGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWS 592
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL AC D VE ER+++LEP G ++ ++NIYA+K +W +A +R+LMK
Sbjct: 593 TLLRACRVHGD---VERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMK 649
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
+ ++K PG S I++ D+V F+ GD HP E+IY+ML+ +A
Sbjct: 650 SKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLA 692
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 159/314 (50%), Gaps = 13/314 (4%)
Query: 52 QIIKASFDNRT-----ISDTQLA---KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVI 103
Q+++ S DN + IS T L K ++ LV + + A +F+++ ++ T+I
Sbjct: 28 QVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLI 87
Query: 104 RGYAEAGLGHRGIQLYTQM-IGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKD 159
GY A + L+ M + +GL D F + KACG D+ + +H VK+
Sbjct: 88 SGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGL 147
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
NSV + L+ Y G + + +F +M +NVV+WTA+I G V+ +E + F
Sbjct: 148 VNSVFVG-SALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFS 206
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
+M S VE + T L ACA+ GA G+ +H K ++ + L MY KCG
Sbjct: 207 EMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCG 266
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
+E L +F+ + ++V +W +II L G E AV+ F +M+ S + P++ T AV++
Sbjct: 267 KLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVIS 326
Query: 340 ACSHAGLIEKGKEI 353
C++ IE G+++
Sbjct: 327 GCANLARIEWGEQL 340
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 177/507 (34%), Positives = 282/507 (55%), Gaps = 38/507 (7%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIA 82
+S+T T H+ LL C HL Q+HAQII + F + S T L L SL + +A
Sbjct: 45 SSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHH-SITHLINLY-SLFHKCDLA 102
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDPDSFTYPILL--- 138
+ VF+ NPS +N++IR Y + + +++Y M+ GL+ D F L+
Sbjct: 103 RS--VFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMY 160
Query: 139 KACGDLRQVKGVHSLVVKSK--DFNSVIHSLTR------------------------LIT 172
GDL++ + V + K +N++I L++ ++
Sbjct: 161 SKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMA 220
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
Y + G LFD+M NV TW +I +++ + +E I F +MR N +T
Sbjct: 221 GYAHNGCFVEVLELFDKMKLGNV-TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVT 279
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
VSVL A A L A G H + + + N +G +L DMYAKCG ++ + ++F +
Sbjct: 280 FVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMD 339
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
K+ +WN+++ G A+HG G+ A+ +F MQ S ++ D V+ ++VL+AC HAGL+E+G++
Sbjct: 340 HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRK 399
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
IF++M Y ++P+++HY C+VDLL RA L DE I+ MP+EP+A +WG+LL +C
Sbjct: 400 IFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMH 459
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
+NV+L E+A++ L+KLEP N ++V++S+IYA +W DAGK R M + + K PG
Sbjct: 460 ---SNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPG 516
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIY 499
CS +E+ + VH F VGD HP E ++
Sbjct: 517 CSWVELKNKVHAFRVGDKSHPQLESMH 543
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 158/476 (33%), Positives = 256/476 (53%), Gaps = 40/476 (8%)
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYP 135
V + A F +I +N +I GY ++G+ +L+ +M+ + PD FT+
Sbjct: 241 VRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFT 300
Query: 136 ILLKAC---GDLRQVKGVHSLVVK-SKDF--NSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
LL AC G K VH ++ DF + + L+T Y G + A +FD
Sbjct: 301 SLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDS 360
Query: 190 MTEKNVVTWTAMINGHV------------KQKNYR-------------------EGIDLF 218
MT K+VV+W +++G++ K+ Y+ + + LF
Sbjct: 361 MTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLF 420
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
+MR V+ + T ++AC LGA + GK +H + + ++ G AL MYA+C
Sbjct: 421 NQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARC 480
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G +++A VF ++ + +WN++I L HG G EA+++F QM GI PD ++ + +L
Sbjct: 481 GAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTIL 540
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
TAC+HAGL++ G + F +M RD+ + P HY L+DLL RA + EA ++I+ MP EP
Sbjct: 541 TACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPT 600
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
+W ++L+ C D +EL A ++L K+ P +DG Y+L+SN Y+A +W DA ++
Sbjct: 601 PAIWEAILSGCRINGD---MELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARV 657
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
R+LM++R + K PGCS IE+ + VH F+VGD +HP + E+Y LE V +R+ Y
Sbjct: 658 RKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGY 713
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 199/490 (40%), Gaps = 132/490 (26%)
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIG--NGLDPDSFTYPILLKACGDLRQVKGVH-- 151
T N +I +A A L + ++ ++ + L PD +++ LL A G + + H
Sbjct: 122 TVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCT 181
Query: 152 ----------------------SLVVK------SKDFNSVIHSL--------TRLITFYC 175
+L +K ++D V+ + T ++ +
Sbjct: 182 QLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHV 241
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
GDV +A+ F+++ + V W AMI+G+V+ E +LFR+M + +E T S
Sbjct: 242 RKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTS 301
Query: 236 VLSACANLGASELGKWVH--------EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+LSACAN G GK VH +FV + + +N+ AL +Y+K G I A ++
Sbjct: 302 LLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNN----ALVTLYSKSGKIAVATKI 357
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGC-------------------------------GEEAV 316
F + K+V +WN+I+ G GC E+A+
Sbjct: 358 FDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDAL 417
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM------------------- 357
K+F QM+ +KP D T + AC G ++ GK++ ++
Sbjct: 418 KLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMY 477
Query: 358 ---------RRDYKVEPNVK--HYGCLVDLLCRARLLDEAYEVIRNMPME---PNAVLWG 403
R + V PNV + ++ L + EA E+ M + P+ + +
Sbjct: 478 ARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFL 537
Query: 404 SLLTACASA---DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRR 460
++LTAC A DDG + E +MER + P D L+ D G+ R
Sbjct: 538 TILTACNHAGLVDDG--FQYFE-SMERDFGISPGEDHYARLI----------DLLGRAGR 584
Query: 461 LMKERNIVKN 470
+ + R+++K
Sbjct: 585 IGEARDLIKT 594
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 148/356 (41%), Gaps = 76/356 (21%)
Query: 168 TRLITFYCNFGDVKSAQLLFDQM--TEKNVVTWTAMINGHVKQKNYREGIDLFRKM--RD 223
T L++ Y G ++ + FD + ++ V AMI+ + + +FR + D
Sbjct: 93 TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASD 152
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN---DKLGA--------ALT 272
+ ++ + S+LSA + H+ +C L+ KLGA AL
Sbjct: 153 DSLRPDDYSFTSLLSAVGQM---------HDLAVSHCTQLHCAVHKLGAGAVLSVSNALI 203
Query: 273 DMYAKC---GYIEEALRVFKIVLEKNVCT------------------------------- 298
+Y KC G +A +V + EK+ T
Sbjct: 204 ALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVV 263
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI---FY 355
WN++I G G EA ++F +M I PD+ T ++L+AC++AG GK + F
Sbjct: 264 WNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFI 323
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA--- 412
++ D+ E + LV L ++ + A ++ +M ++ + V W ++L+ +
Sbjct: 324 RLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLK-DVVSWNTILSGYIESGCL 382
Query: 413 DDGANVELAEIAMERLIKLEPF-NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
D+ A R+ K P+ ++ ++++M + Y +DA K+ M+ ++
Sbjct: 383 DNAA----------RIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDV 428
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 280/497 (56%), Gaps = 39/497 (7%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q KQ+HA I + + +++ +L YA +F I NP+ F +N++I
Sbjct: 3 QTKQIHAHAITNNLTRFSYISSRILAFF-ALSPRGDFRYAETLFTHIPNPNIFDYNSIIT 61
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVK---SKDF- 160
Y H+ ++T+M+ + P+S T+ L+KAC L ++ V +L +K S D
Sbjct: 62 SYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLEQVFTLSMKLGNSSDVY 121
Query: 161 --NSVIHSL------------------------TRLITFYCNFGDVKSAQLLFDQMTEKN 194
+SVI++ T L++ YC+ G V A+ +FD+M +N
Sbjct: 122 FVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRN 181
Query: 195 VVTWTAMINGHVKQKNYREGIDLFR--KMRDSG---VEVNELTLVSVLSACANLGASELG 249
+++AM++G+V+ + EG+ LFR K +D G ++ N LVSVL+AC +GA E G
Sbjct: 182 EASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEG 241
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH 309
KW+H +V +N + + +LG AL D Y KCG+++ A +VF + K+V TW+++I GLAI+
Sbjct: 242 KWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAIN 301
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKH 369
G + A+++F +M+ G KP++VT + VLTAC+H L + +F M Y + P+++H
Sbjct: 302 GNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIEH 361
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLI 429
YGC+VD+L R+ + +A I +M +EP+ +WGSLL C + EL + + LI
Sbjct: 362 YGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMH---GHYELGQKVGKYLI 418
Query: 430 KLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGD 489
+ EP + G YVL++N+YA +W+ ++R+LMK+R ++ G S IEI+ +H+F D
Sbjct: 419 EFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTIHKFFADD 478
Query: 490 GRHPCSEEIYSMLEYVA 506
S EIY +L ++
Sbjct: 479 KCCLYSREIYDVLSHLG 495
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 155/362 (42%), Gaps = 72/362 (19%)
Query: 8 NSQLTHFTNSANSHK---------NSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASF 58
NS +T +T ++ HK N+N SH L++ C L +QV +K
Sbjct: 57 NSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLEQVFTLSMK--- 113
Query: 59 DNRTISDTQLAKLIESLVNS----SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHR 114
+ ++ + S++N+ S I A VF++ N + + +++ GY GL +
Sbjct: 114 ----LGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNE 169
Query: 115 GIQLYTQM---------------IGNGLDPDS------------------FTYPIL---L 138
++ +M + NG + F +L L
Sbjct: 170 ARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVL 229
Query: 139 KAC---GDLRQVKGVHSLVVKSKDFNSVIHSL---TRLITFYCNFGDVKSAQLLFDQMTE 192
AC G + K +HS V + N + + L T LI FY G VK A+ +F++M
Sbjct: 230 NACTMVGAFEEGKWIHSYVEE----NGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPV 285
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
K+V TW+AMI G N + ++LF KM G + NE+T V VL+AC + S G+
Sbjct: 286 KDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNH--KSLFGESA 343
Query: 253 HEF---VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSIIGGLAI 308
F K I + + + D+ A+ G +++AL + +E + W S++ G +
Sbjct: 344 RLFGIMSEKYNITPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLM 403
Query: 309 HG 310
HG
Sbjct: 404 HG 405
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 256/466 (54%), Gaps = 46/466 (9%)
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
+A +F+++ N S A + R +A +G + + L+ MI +G PD+ ++L AC
Sbjct: 63 GHARDLFDEMPNQSLVARTAMARAHAVSGQAAQALDLFQDMIADGFMPDNVALAVVLAAC 122
Query: 142 GDL-----RQVKG--VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
R+ G VH+ +V V S T LI Y G++ A+ +FD M K+
Sbjct: 123 HGAGSCTARRSPGRMVHAFIVACGIEPDVFVS-TELIRVYGERGEMTVARRVFDSMPTKS 181
Query: 195 VVTWTAMINGHVKQKN----YR---------------------------EGIDLFRKMRD 223
+ W M++ +V+ K+ YR E + LFR+M
Sbjct: 182 TIAWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVS 241
Query: 224 SG---VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
V N T+ +VLSACA G E G WVH +++KN + N L L DMYAKCG
Sbjct: 242 PSSCTVHPNGPTMSTVLSACAGAGCLETGIWVHLYIDKNQMNDNGTLDRCLIDMYAKCGS 301
Query: 281 IEEALRVF-KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
I++AL+VF K ++++ +W ++I GLA+HG + ++MF MQ SG+ PDDVT + VL
Sbjct: 302 IDKALQVFEKAPGKRDLYSWTTVICGLAMHGRANDVLRMFSMMQDSGMCPDDVTFVGVLN 361
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
AC+H GL+++G FY+M+ Y++ P ++HYGC++DLL R L EAY +I+ MPM+PN
Sbjct: 362 ACAHGGLVDEGLHHFYSMQEKYRITPKIEHYGCMIDLLGRVGRLPEAYRMIQTMPMKPNM 421
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
V+WG+ L+AC ++VEL EIA + +L+P + V+MS++YA W + R
Sbjct: 422 VIWGAFLSACKVH---SSVELGEIAAAEVTRLDPDDPWARVMMSSMYAKAQDWSGLARER 478
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
R M + K PGCS + ++ VHEF+ G +HP EI S+LE V
Sbjct: 479 REMNSLQMKKTPGCSSVALDGEVHEFVAGGNQHPLCAEICSVLETV 524
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 142/329 (43%), Gaps = 53/329 (16%)
Query: 134 YPILLKACGDLRQVK--------------GVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
+P+ L + LR +K G+H L+ K+ ++ H T L++ Y G
Sbjct: 2 HPLTLSSTALLRLIKSLSPATPRAHLSASGIHCLLFKAGLLHAGAHLPTALLSAYGALGR 61
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
A+ LFD+M +++V TAM H + +DLF+ M G + + L VL+A
Sbjct: 62 SGHARDLFDEMPNQSLVARTAMARAHAVSGQAAQALDLFQDMIADGFMPDNVALAVVLAA 121
Query: 240 CANLGASEL----GKWVHEFVNKNCIILNDKLGAALTDMYAKCGY--------------- 280
C G+ G+ VH F+ I + + L +Y + G
Sbjct: 122 CHGAGSCTARRSPGRMVHAFIVACGIEPDVFVSTELIRVYGERGEMTVARRVFDSMPTKS 181
Query: 281 ----------------IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-- 322
IE A R+F + ++V +WN++I G + G +EA+ +F QM
Sbjct: 182 TIAWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVS 241
Query: 323 -QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
+ P+ T+ VL+AC+ AG +E G + + ++ ++ N CL+D+ +
Sbjct: 242 PSSCTVHPNGPTMSTVLSACAGAGCLETGIWVHLYIDKN-QMNDNGTLDRCLIDMYAKCG 300
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+D+A +V P + + W +++ A
Sbjct: 301 SIDKALQVFEKAPGKRDLYSWTTVICGLA 329
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 136/295 (46%), Gaps = 25/295 (8%)
Query: 53 IIKASFDN-RTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGL 111
+ + FD+ T S ++ V + I A+ +F + ++NTVI GY G
Sbjct: 169 VARRVFDSMPTKSTIAWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGR 228
Query: 112 GHRGIQLYTQMIGNG---LDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIH 165
+ L+ QM+ + P+ T +L AC G L VH + K++ ++
Sbjct: 229 CKEALGLFRQMVSPSSCTVHPNGPTMSTVLSACAGAGCLETGIWVHLYIDKNQMNDN--G 286
Query: 166 SLTR-LITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+L R LI Y G + A +F++ ++++ +WT +I G + + +F M+D
Sbjct: 287 TLDRCLIDMYAKCGSIDKALQVFEKAPGKRDLYSWTTVICGLAMHGRANDVLRMFSMMQD 346
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVN---KNCIILNDKLGAALTDMYAKCGY 280
SG+ +++T V VL+ACA+ G + G +H F + K I + + D+ + G
Sbjct: 347 SGMCPDDVTFVGVLNACAHGGLVDEG--LHHFYSMQEKYRITPKIEHYGCMIDLLGRVGR 404
Query: 281 IEEALRVFKIV-LEKNVCTWNSIIGGLAIHGC---GEEAVKMFWQMQMSGIKPDD 331
+ EA R+ + + ++ N+ W + + +H GE A +++ + PDD
Sbjct: 405 LPEAYRMIQTMPMKPNMVIWGAFLSACKVHSSVELGEIAAA-----EVTRLDPDD 454
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 167/475 (35%), Positives = 261/475 (54%), Gaps = 11/475 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+++HA + + F D L I + A VF+Q+ ++ ++I GY
Sbjct: 71 RKIHAHLGSSRFAGDAFLDNSL---IHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGY 127
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSV 163
A+ + I L M+ P+ FT+ LLKA G D + +H+L VK ++
Sbjct: 128 AQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKC-GWHED 186
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
++ + L+ Y G + A +FD++ KN V+W A+I+G ++ + + F +M
Sbjct: 187 VYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLR 246
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
+G E T SV S+ A LGA E GKWVH V K+ L +G L DMYAK G + +
Sbjct: 247 NGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMID 306
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A +VF V K++ TWNS++ A +G G+EAV F +M+ SG+ + +T + +LTACSH
Sbjct: 307 ARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSH 366
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
GL+++GK ++ M ++Y +EP + HY +V LL RA LL+ A I MPMEP A +WG
Sbjct: 367 GGLVKEGKR-YFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWG 425
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL AC N ++ + A + + +L+P + G VL+ NIYA+ QWD A ++R +MK
Sbjct: 426 ALLAACRMHK---NAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMK 482
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
+ K P CS +E+ + VH F+ D HP +EEIY M ++ +R+E Y M
Sbjct: 483 TTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDM 537
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 2/193 (1%)
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
S ++ACA E + +H + + + L +L MY KC + +A VF + K
Sbjct: 56 SFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRK 115
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
++ +W S+I G A + EA+ + M KP+ T ++L A G++I
Sbjct: 116 DMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQI- 174
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
+ + +V L+D+ R +D A V + + N V W +L++ A D
Sbjct: 175 HALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK-NGVSWNALISGFARKGD 233
Query: 415 GANVELAEIAMER 427
G + + M R
Sbjct: 234 GESALMTFAEMLR 246
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 272/482 (56%), Gaps = 48/482 (9%)
Query: 71 LIESLVNSSQIAYAHLVFNQ--IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGL 127
+I + + A +F+Q ++ T ++N++I GYA+ L + ++ ++ G+
Sbjct: 214 MIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGI 273
Query: 128 DPDSFTYPILLKACGD---LRQVKGVHS-LVVKSKDFNSVIHSLTRLITFYCNFGDVKSA 183
+ DSFT +L AC D LR+ K VH+ VV+ +N+ + L+ Y D+K+A
Sbjct: 274 EADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGG--ALVEMYSKCEDLKAA 331
Query: 184 QLLFDQMTEK-----------------------------------NVVTWTAMINGHVKQ 208
QL FD +TE+ NV TW +I+GHV+
Sbjct: 332 QLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVEN 391
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ + LF +M+ S + + T+ +L ACA L GK VH + L+ +G
Sbjct: 392 GHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIG 451
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
AAL DMYAKCG I+ A++V+ + N+ + N+++ A+HG G+E + +F M +G +
Sbjct: 452 AALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFR 511
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD VT ++VL++C HAG +E G E F+++ Y V P++KHY C+VDLL RA LDEAYE
Sbjct: 512 PDHVTFLSVLSSCVHAGAVETGHE-FFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYE 570
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
+++ +P +P++V+WG+LL C NVEL EIA E LI+LEP N GNYVL++N+YA
Sbjct: 571 LVKKIPRKPDSVMWGALLGGCVIW---GNVELGEIAAESLIELEPNNTGNYVLLANLYAY 627
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
+W D + R+++K+R + K+PGCS IE + +H F+ D H +E+IY+ L+ +
Sbjct: 628 AGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLDNLNTH 687
Query: 509 LR 510
+R
Sbjct: 688 MR 689
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 221/467 (47%), Gaps = 64/467 (13%)
Query: 7 PNS--QLTHFTNSANSHKNS--NTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRT 62
PNS Q H + +A+ S + S + LL+ C L KQVHA +K F
Sbjct: 35 PNSTPQSMHLSTAAHHTHLSLLDKQIDSSTYASLLESCRTLNLGKQVHAHTLKTGFHGHE 94
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
+T KL++ + A+LVF ++ + +++ ++ + + G + L+ ++
Sbjct: 95 FVET---KLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKL 151
Query: 123 IGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKS-KDFNSVIH-----------SL 167
+ + + F +P++LK CG LR + + +H +V+K D S + S
Sbjct: 152 QLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSY 211
Query: 168 TRLITFYCNFGDVKSAQLLFDQM--TEKNVVTWTAMINGHVKQKNYREGIDLFRK-MRDS 224
+I YC G+V+ A+ LFDQM K+ ++W +MI+G+ + E + +FR + +
Sbjct: 212 NTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEE 271
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
G+E + TL SVL+ACA++ + GK VH + N +G AL +MY+KC ++ A
Sbjct: 272 GIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAA 331
Query: 285 LRVFKIVLEK-----------------------------------NVCTWNSIIGGLAIH 309
F V E+ NV TWN II G +
Sbjct: 332 QLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVEN 391
Query: 310 GCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVK 368
G E A+++F +MQ S ++PD T+ +L AC+ I +GK++ +++R+ Y+++ ++
Sbjct: 392 GHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIG 451
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
LVD+ + + A +V N PN V ++LTA A G
Sbjct: 452 --AALVDMYAKCGSIKHAMQVY-NRISNPNLVSQNAMLTAYAMHGHG 495
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 8/185 (4%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQII 92
LP + + + KQVHA I+ ++ D + A L++ I +A V+N+I
Sbjct: 420 LPACARLATIARGKQVHAHSIRQGYE----LDVHIGAALVDMYAKCGSIKHAMQVYNRIS 475
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHS 152
NP+ + N ++ YA G G GI L+ M+GNG PD T+ +L +C V+ H
Sbjct: 476 NPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHE 535
Query: 153 LVVKSKDFNSV--IHSLTRLITFYCNFGDVKSAQLLFDQMTEK-NVVTWTAMINGHVKQK 209
+N + T ++ G + A L ++ K + V W A++ G V
Sbjct: 536 FFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWG 595
Query: 210 NYREG 214
N G
Sbjct: 596 NVELG 600
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 167/478 (34%), Positives = 275/478 (57%), Gaps = 18/478 (3%)
Query: 6 VPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISD 65
+P S+L T S N +S + + + ++C + +Q+HA +I+ +
Sbjct: 31 LPFSKLYPTTLSENEGFDS----REERVMSVFKQCESMKHLEQLHAHVIQTGLEQNLFV- 85
Query: 66 TQLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI 123
+ K+I ++ + YA VF +I NP F +NT+IRG + + Y +M
Sbjct: 86 --MGKIIVFCAVSECGSMDYALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQ 143
Query: 124 GNGLDPDSFTYPILLKACGDLRQ---VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
G D+FTY L+K CG L K +H V+K + L+ Y F D+
Sbjct: 144 VKGEVLDNFTYSFLVKVCGQLGSDLLGKQIHCNVLK-HGLEEHVFVRNTLVHMYGMFKDI 202
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
++A LF++M + +V W +I+ +V Y+E I+LF +M SG++ ++ T V LSAC
Sbjct: 203 EAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSAC 262
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A LG ++G+ VH ++ + + +L DMYAKCG +E A +F + +N+ +WN
Sbjct: 263 AALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWN 322
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGI-KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
++I GLA+HG G+EA+++F +M + P++VT + VL ACSH G++E+G+ F MRR
Sbjct: 323 TMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMRR 382
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
DY ++P +KHYG +VD+L RA L++EAY +I++MP+E N+++W +LL AC N+E
Sbjct: 383 DYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRVH---GNLE 439
Query: 420 LAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK-NPGCSVI 476
LAE + L++LEP + +YVL++N+YA+ QW+ ++R+ M R + K PG S I
Sbjct: 440 LAEQVRQXLLELEPDHSSDYVLLANMYASAGQWNKVXRVRKSMHIRGVQKPKPGNSYI 497
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 170/461 (36%), Positives = 271/461 (58%), Gaps = 14/461 (3%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS--TFAFNTVIRG 105
Q+HA +K + T L LI + S + A V + + T ++NT+I G
Sbjct: 114 QLHALSVKLGLSSDTFV---LNTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAG 170
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNS 162
Y AGL ++ +Q ++QM + D T L AC ++ K H+L+V + F
Sbjct: 171 YIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLV-TNGFEI 229
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ + LI+ Y G V+ A+ +FD M ++N V WT+MI+G+ + +E I LFR M+
Sbjct: 230 NCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQ 289
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+GV+V++ T+ +V+S+C +GA +LG++VH + + + + + + +L DMY+KCG I+
Sbjct: 290 IAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIK 349
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM-SGIKPDDVTLIAVLTAC 341
+A +F +++++ +W ++I G A +G EA+ +F QM+ G+ P+++T + VLT+C
Sbjct: 350 KAYDIFCGMVKRDNFSW-TVIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSC 408
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SH GL+E+G F+ M Y + P ++HYGC+VDLL RA+LL EA + I+ MP+ P+AV+
Sbjct: 409 SHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVM 468
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
W SLL AC + + V LAE ER+ LEP G VL+S +YA ++W DA K+R
Sbjct: 469 WRSLLFACRTCGE---VGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTG 525
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
+ K PGCS IE++ VHEF GD H +E IYS L
Sbjct: 526 IYSGRKTKQPGCSFIEVDGCVHEFFAGDESHFETEAIYSTL 566
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 172/515 (33%), Positives = 292/515 (56%), Gaps = 18/515 (3%)
Query: 1 MLKQLVPNSQLTH-FTNSANSHKNSNTATKSHHHLPLLQKCT---HLVQFKQVHAQIIKA 56
M+K V Q + F + +N++ S L + C + + +++H+ ++
Sbjct: 58 MIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAV 117
Query: 57 SFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
F + L++ ++ A +F+++I+ S ++ +I GY +G
Sbjct: 118 GF---CLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAG 174
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN 176
+L+ QMI + DS + ++ A L + L + + + V S T +I Y +
Sbjct: 175 KLFDQMI----EKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVV--SWTIMIYGYSS 228
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS-GVEVNELTLVS 235
G++ SA+ LFD M EKN+ +W AMI+G+ + K E + LF +M+ + +E +E+T+VS
Sbjct: 229 NGNLDSARSLFDAMPEKNLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVS 288
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
VL A A+LGA +LG WVH FV + + +G AL DMYAKCG I ++ VF + EK
Sbjct: 289 VLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKE 348
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
+WN++I AI+G +EA+ +F +M G P+++T+I VL+AC+H+GL+E+GK F
Sbjct: 349 TASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFK 408
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
M ++ + P ++HYGC+VDLL RA L EA +++ +MP E N ++ S L AC + D
Sbjct: 409 AM-EEFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKD- 466
Query: 416 ANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSV 475
V AE ++ IK+E +NDGNY+++ N+YA + +W +A +++ LM+ + K GCS
Sbjct: 467 --VARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSA 524
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
IE++ V EF+ GD HP E I+S+L + + ++
Sbjct: 525 IEVDSRVWEFVAGDRVHPKWEAIHSVLGQLWVHMK 559
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 174/352 (49%), Gaps = 26/352 (7%)
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIIN-PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN- 125
LA L + L I +A +F+ + F N++I+ Y LY + N
Sbjct: 26 LAPLYDPLAG---IVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNT 82
Query: 126 GLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
PDSFT+ +L K+C + + + +HS VV + F +++ T L+ Y FG +
Sbjct: 83 SFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVV-AVGFCLDLYAATALVDMYAKFGKMDC 141
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A+ LFD+M +++ V+WTA+I G+V+ + LF +M +E + +++ A
Sbjct: 142 ARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQM----IEKDSAAFNTMIDAYVK 197
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDM---YAKCGYIEEALRVFKIVLEKNVCTW 299
LG + + + + + ++ + T M Y+ G ++ A +F + EKN+ +W
Sbjct: 198 LGDMCSARKLFDEMPERSVV-------SWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSW 250
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
N++I G + EA+K+F +MQ + ++PD+VT+++VL A + G ++ G + +R
Sbjct: 251 NAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVR 310
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
R K++ L+D+ + + ++ V NMP E W +L+ A A
Sbjct: 311 RK-KLDRATNVGTALIDMYAKCGEIVKSRGVFDNMP-EKETASWNALINAFA 360
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 12/251 (4%)
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN-VVTWTAMINGHVKQKNYREGIDLF 218
F + S+ L Y + A+ +FD ++ +MI +V + Y E L+
Sbjct: 16 FIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALY 75
Query: 219 RKMR-DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
R +R ++ + T + +CA A G+ +H V L+ AL DMYAK
Sbjct: 76 RDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAK 135
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
G ++ A ++F +++++ +W ++IGG G + A K+F QM I+ D +
Sbjct: 136 FGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQM----IEKDSAAFNTM 191
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
+ A G + +++F M V + YG LD A + MP E
Sbjct: 192 IDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYG-----YSSNGNLDSARSLFDAMP-EK 245
Query: 398 NAVLWGSLLTA 408
N W ++++
Sbjct: 246 NLFSWNAMISG 256
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 157/343 (45%), Positives = 215/343 (62%), Gaps = 10/343 (2%)
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
+N+VI L R G V +A +FD M + V+WTA+I+G VK + E ID FR
Sbjct: 173 YNTVISGLMR-------NGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFR 225
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
M GVE + +TL++V+SACA +GA LG WVH V + + N ++ +L DMYA+CG
Sbjct: 226 AMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCG 285
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
+E A +VF + ++ V +WNS+I G A +G +AV+ F M+ G KPD VT VLT
Sbjct: 286 QVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLT 345
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSH GL ++G + MR +Y + ++HYGC+VDLL R+ L+EA V+ MPM PN
Sbjct: 346 ACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVVTTMPMRPNE 405
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
V+ G+LL C D V +AE M+ L++L+P D NYVL+SNIYAA +WD AGK+R
Sbjct: 406 VVLGALLAGCRMHGD---VGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDGAGKVR 462
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
LMK R + K PG S +EI+ VHEF+ GD HP +EEI ML
Sbjct: 463 SLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQML 505
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 7/281 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTI-SDTQLAKLIESLVNSSQIAYAHLVFNQIINP 94
LL C F + FD + S +I L+ + +A A VF+ + P
Sbjct: 140 LLSTCLVRFYFASRLPHLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAP 199
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVH 151
++ +I G + G I + M+ +G++PD T ++ AC G L VH
Sbjct: 200 DKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVH 259
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
LVV+ + + LI Y G V+ A+ +F M ++ VV+W +MI G
Sbjct: 260 RLVVR-QGLERNVRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRC 318
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN-CIILNDKLGAA 270
+ ++ F MR G + + +T VL+AC++ G ++ G ++ + I +
Sbjct: 319 ADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGC 378
Query: 271 LTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSIIGGLAIHG 310
+ D+ + G +EEA+RV + + N +++ G +HG
Sbjct: 379 VVDLLGRSGQLEEAMRVVTTMPMRPNEVVLGALLAGCRMHG 419
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 110/254 (43%), Gaps = 38/254 (14%)
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMR--DSGVEVNELTLVSVLSACANLGASELGKW 251
+V +WT+ I KQ + M + N++TL++VLSACA+ +S L +
Sbjct: 63 DVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACADSPSSPLARR 122
Query: 252 VHEFVNKNCIILNDK---LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA- 307
+ V+ + L L L Y AL++F + ++ T+N++I GL
Sbjct: 123 LALSVHARVLKLFPSHLLLSTCLVRFYFASRLPHLALQLFDAMPVRSAVTYNTVISGLMR 182
Query: 308 -------------------------IHGC-----GEEAVKMFWQMQMSGIKPDDVTLIAV 337
I GC +EA+ F M + G++PD VTLIAV
Sbjct: 183 NGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAV 242
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
++AC+ G + G + + R +E NV+ L+D+ R ++ A +V M +
Sbjct: 243 ISACAEVGALGLGMWVHRLVVRQ-GLERNVRIANSLIDMYARCGQVELARQVFSGM-RKR 300
Query: 398 NAVLWGSLLTACAS 411
V W S++ A+
Sbjct: 301 TVVSWNSMIVGFAA 314
>gi|356499342|ref|XP_003518500.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g29230-like [Glycine max]
Length = 446
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 166/448 (37%), Positives = 263/448 (58%), Gaps = 14/448 (3%)
Query: 74 SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP--DS 131
SL +A A+ VF ++ + + FA+ V+ + +L+ L P D
Sbjct: 3 SLRGGVFVADAYKVFAEMRDKNVFAWTAVVAAHVACHDMVSARRLFD------LAPQCDV 56
Query: 132 FTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
+ +++ +L + L + D + + S +++ Y N G+V+ +F++M
Sbjct: 57 VLWNVIVSGYIELGDMVAARELFDRMPDCD--VMSWNTVLSGYANNGEVELFVKVFEEMP 114
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV-NELTLVSVLSACANLGASELGK 250
+NV +W +I G+V+ ++E ++ F++M GV V N+ T+V+VLSAC+ LG E+GK
Sbjct: 115 ARNVYSWNGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACSRLGDLEIGK 174
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
WVH + + N +G AL DMYAKCG IE+AL VF + K++ TWN+II LA+H
Sbjct: 175 WVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINSLAMHX 234
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
+A+ +F M+ +G +PD VT + +L+AC+H GL+ G F +M DY + P ++HY
Sbjct: 235 HAADALSLFEGMKRAGERPDGVTFVGILSACTHMGLVRNGFLHFQSMVDDYLIVPQIEHY 294
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
GC+VDLL RA L+++A +++R MPMEP+ V+W +LL AC NVE+AE+A++RLI+
Sbjct: 295 GCMVDLLGRAGLINQAVDIVRKMPMEPDVVIWAALLGACRXY---KNVEMAELALQRLIE 351
Query: 431 LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDG 490
LEP N GN+V++SNIY + D +++ M++ K PGCSVI ND V EF D
Sbjct: 352 LEPNNPGNFVMLSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCNDSVVEFYSLDE 411
Query: 491 RHPCSEEIYSMLEYVAISLREECYAARM 518
RHP ++ IY L+ + I LR Y +
Sbjct: 412 RHPETDSIYRALQGLTILLRSHGYVPNL 439
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 58 FDNRTISDTQLAKLIES-LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAG------ 110
FD D L +I S + + A +F+++ + ++NTV+ GYA G
Sbjct: 48 FDLAPQCDVVLWNVIVSGYIELGDMVAARELFDRMPDCDVMSWNTVLSGYANNGEVELFV 107
Query: 111 -----LGHRGIQLYTQMIG----NGL-----------------DPDSFTYPILLKAC--- 141
+ R + + +IG NGL P+ +T +L AC
Sbjct: 108 KVFEEMPARNVYSWNGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACSRL 167
Query: 142 GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
GDL K VH + S + + LI Y G ++ A +FD + K+++TW +
Sbjct: 168 GDLEIGKWVH-VYADSIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTI 226
Query: 202 INGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH--EFVNKN 259
IN + + + LF M+ +G + +T V +LSAC ++G G ++H V+
Sbjct: 227 INSLAMHXHAADALSLFEGMKRAGERPDGVTFVGILSACTHMGLVRNG-FLHFQSMVDDY 285
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIG 304
I+ + + D+ + G I +A+ + K+ +E +V W +++G
Sbjct: 286 LIVPQIEHYGCMVDLLGRAGLINQAVDIVRKMPMEPDVVIWAALLG 331
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 159/454 (35%), Positives = 253/454 (55%), Gaps = 35/454 (7%)
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
N A+N +I GY GL +++ +M+ +G++ D FTYP +++AC + R + K
Sbjct: 248 NMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQ 307
Query: 150 VHSLVVKSKDF-----NSVIH------------------------SLTRLITFYCNFGDV 180
VH+ V++ +DF NS++ S L++ Y + G +
Sbjct: 308 VHAYVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
A+L+F +M EKN+++W MI+G + EG+ LF M+ G E + + +C
Sbjct: 368 GEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC 427
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A LGA G+ H + K + G AL MYAKCG +EEA +VF+ + + +WN
Sbjct: 428 AVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWN 487
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
++I L HG G EAV ++ +M GI+PD +T + VLTACSHAGL+++G++ F +M
Sbjct: 488 ALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETV 547
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
Y++ P HY L+DLLCR+ EA +I ++P +P A +W +LL+ C N+EL
Sbjct: 548 YRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVH---GNMEL 604
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
IA ++L L P +DG Y+L+SN+YAA QW++ ++R+LM++R + K CS IE+
Sbjct: 605 GIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMET 664
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
VH F+V D HP +E +Y L+ + +R Y
Sbjct: 665 QVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGY 698
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 203/500 (40%), Gaps = 113/500 (22%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LPL + L + VH II F L +LI+ SS++ YA +F++I
Sbjct: 23 LPLRRTSLQLA--RAVHGNIITFGFQPHA---HILNRLIDVYCKSSELDYARQLFDEISE 77
Query: 94 PSTFAFNTVIRGYAEAGL---------------------------------GHRGIQLYT 120
P A T++ GY +G G+ I L+
Sbjct: 78 PDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFC 137
Query: 121 QMIGNGLDPDSFTYPILLKACG----DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN 176
+M G PD FTY +L D +Q H+ +KS V L++ Y
Sbjct: 138 KMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGA-GYVTSVSNALVSVYSR 196
Query: 177 FGD----VKSAQLLFDQMTEKNVVTWTAMINGHVKQKN---------------------- 210
+ SA+ +FD + EK+ +WT M+ G+VK
Sbjct: 197 CASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNA 256
Query: 211 ----------YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV---- 256
Y+E +++ R+M SG+E++E T SV+ ACAN +LGK VH +V
Sbjct: 257 MISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE 316
Query: 257 ------NKNCIILNDKLGA--------------------ALTDMYAKCGYIEEALRVFKI 290
+ + + L K G AL Y G+I EA +FK
Sbjct: 317 DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+ EKN+ +W +I GLA +G GEE +K+F M+ G +P D + +C+ G G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
++ F+ + ++ L+ + + +++EA +V R MP ++V W +L+ A
Sbjct: 437 QQ-FHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPC-LDSVSWNALIAALG 494
Query: 411 SADDGANVELAEIAMERLIK 430
G VE ++ E L K
Sbjct: 495 Q--HGHGVEAVDVYEEMLKK 512
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 137/299 (45%), Gaps = 39/299 (13%)
Query: 47 KQVHAQIIKAS-----FDN---------------RTISDTQLAK-------LIESLVNSS 79
KQVHA +++ FDN R I + AK L+ V+S
Sbjct: 306 KQVHAYVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSG 365
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK 139
I A L+F ++ + ++ +I G AE G G G++L++ M G +P + + +K
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 140 ACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVV 196
+C L + H+ +VK F+S + + LIT Y G V+ AQ +F M + V
Sbjct: 426 SCAVLGAYCNGQQFHAQLVKI-GFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSV 484
Query: 197 TWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV 256
+W A+I + + E +D++ +M G+ + +T ++VL+AC++ G + G+ ++
Sbjct: 485 SWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGR---KYF 541
Query: 257 NKNCIILNDKLG----AALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHG 310
N + G A L D+ + G EA + + + + W +++ G +HG
Sbjct: 542 NSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHG 600
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 149/365 (40%), Gaps = 101/365 (27%)
Query: 134 YPILLKACGDLRQV-----KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
Y L+ C LR+ + VH ++ + F H L RLI YC ++ A+ LFD
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNII-TFGFQPHAHILNRLIDVYCKSSELDYARQLFD 73
Query: 189 QMTE---------------------------------KNVVTWTAMINGHVKQKNYREGI 215
+++E ++ V + AMI G + I
Sbjct: 74 EISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAI 133
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND---KLGA--- 269
+LF KM+ G + ++ T SVL+ A + E K C+ + K GA
Sbjct: 134 NLFCKMKHEGFKPDDFTYASVLAGLALVVDDE----------KQCVQFHAAALKSGAGYV 183
Query: 270 -----ALTDMYAKCG----YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCG-------- 312
AL +Y++C + A +VF + EK+ +W +++ G +GC
Sbjct: 184 TSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLK 243
Query: 313 ------------------------EEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
+EA++M +M SGI+ D+ T +V+ AC++A L++
Sbjct: 244 GMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQ 303
Query: 349 KGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
GK++ Y +RR+ + + LV L + +EA + MP + + V W +LL+
Sbjct: 304 LGKQVHAYVLRRE---DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLS 359
Query: 408 ACASA 412
S+
Sbjct: 360 GYVSS 364
>gi|357118743|ref|XP_003561109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Brachypodium distachyon]
Length = 535
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 235/361 (65%), Gaps = 23/361 (6%)
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD-SGVEV 228
L++ Y G V +A+ LF +MTE+NVV+WTAM++G+ + + ++ F +M + +GV+
Sbjct: 161 LLSAYARCGLVDAAEKLFGEMTERNVVSWTAMVSGYAQNGRHEAAVETFLEMWEGAGVQP 220
Query: 229 NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
NELT+ SVL ACA +GA ELG V E+ + N + AL +MYAKCG I+ A +VF
Sbjct: 221 NELTVSSVLPACAAVGAMELGTKVEEYARGKGHLGNVFVTNALLEMYAKCGSIQRAWQVF 280
Query: 289 K-IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ------------------MSGIKP 329
+ I +++C+WN++I A+HG EA+ +F +++ M+G+KP
Sbjct: 281 QGIGHRRDLCSWNTMIMAFAVHGLWMEALALFHKLRVRISCSNSLVYFFSIPTHMTGVKP 340
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D +T + V+ AC+H GL+++GK IF +M D+ + P ++HYGC+VDLL RA LL EAY +
Sbjct: 341 DGITFVGVILACTHGGLVDEGKLIFNSMEADFSINPRIEHYGCMVDLLGRAGLLKEAYSM 400
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I +MP EP+AV+WG+LL AC+ N+ELAE A+++L+ LEP N N V++SNIYA+
Sbjct: 401 IISMPAEPDAVIWGALLGACSFH---GNIELAETAVDKLMYLEPQNTANLVILSNIYASS 457
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+WD ++ +L+KE++ K+ G S IE++ +H+F+V D HP EEIY L+ V + +
Sbjct: 458 GKWDGVAQVWKLLKEKDHKKSAGYSFIELDGRMHKFLVEDMSHPIFEEIYKTLDSVTMIM 517
Query: 510 R 510
+
Sbjct: 518 K 518
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIK 328
AL YA+CG ++ A ++F + E+NV +W +++ G A +G E AV+ F +M + +G++
Sbjct: 160 ALLSAYARCGLVDAAEKLFGEMTERNVVSWTAMVSGYAQNGRHEAAVETFLEMWEGAGVQ 219
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
P+++T+ +VL AC+ G +E G ++ R + NV L+++ + + A++
Sbjct: 220 PNELTVSSVLPACAAVGAMELGTKVEEYARGKGHLG-NVFVTNALLEMYAKCGSIQRAWQ 278
Query: 389 VIRNMPMEPNAVLWGSLLTACA 410
V + + + W +++ A A
Sbjct: 279 VFQGIGHRRDLCSWNTMIMAFA 300
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/343 (45%), Positives = 215/343 (62%), Gaps = 10/343 (2%)
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
+N+VI L R G V +A +FD M + V+WTA+I+G VK + E ID FR
Sbjct: 84 YNTVISGLMR-------NGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFR 136
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
M GVE + +TL++V+SACA +GA LG WVH V + + N ++ +L DMYA+CG
Sbjct: 137 AMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCG 196
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
+E A +VF + ++ V +WNS+I G A +G +AV+ F M+ G KPD VT VLT
Sbjct: 197 QVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLT 256
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSH GL ++G + MR +Y + ++HYGC+VDLL R+ L+EA V+ MPM PN
Sbjct: 257 ACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVVTTMPMRPNE 316
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
V+ G+LL C D V +AE M+ L++L+P D NYVL+SNIYAA +WD AGK+R
Sbjct: 317 VVLGALLAGCRMHGD---VGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDGAGKVR 373
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
LMK R + K PG S +EI+ VHEF+ GD HP +EEI ML
Sbjct: 374 SLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQML 416
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 7/281 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTI-SDTQLAKLIESLVNSSQIAYAHLVFNQIINP 94
LL C F + FD + S +I L+ + +A A VF+ + P
Sbjct: 51 LLSTCLVRFYFASRLPHLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAP 110
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVH 151
++ +I G + G I + M+ +G++PD T ++ AC G L VH
Sbjct: 111 DKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVH 170
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
LVV+ + + LI Y G V+ A+ +F M ++ VV+W +MI G
Sbjct: 171 RLVVR-QGLERNVRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRC 229
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN-CIILNDKLGAA 270
+ ++ F MR G + + +T VL+AC++ G ++ G ++ + I +
Sbjct: 230 ADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGC 289
Query: 271 LTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSIIGGLAIHG 310
+ D+ + G +EEA+RV + + N +++ G +HG
Sbjct: 290 VVDLLGRSGQLEEAMRVVTTMPMRPNEVVLGALLAGCRMHG 330
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 36/217 (16%)
Query: 229 NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK---LGAALTDMYAKCGYIEEAL 285
N++TL++VLSACA+ +S L + + V+ + L L L Y AL
Sbjct: 11 NDVTLLTVLSACADSPSSPLARRLALSVHARVLKLFPSHLLLSTCLVRFYFASRLPHLAL 70
Query: 286 RVFKIVLEKNVCTWNSIIGGLA--------------------------IHGC-----GEE 314
++F + ++ T+N++I GL I GC +E
Sbjct: 71 QLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDE 130
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+ F M + G++PD VTLIAV++AC+ G + G + + R +E NV+ L+
Sbjct: 131 AIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQ-GLERNVRIANSLI 189
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
D+ R ++ A +V M + V W S++ A+
Sbjct: 190 DMYARCGQVELARQVFSGM-RKRTVVSWNSMIVGFAA 225
>gi|297723953|ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group]
gi|222631076|gb|EEE63208.1| hypothetical protein OsJ_18018 [Oryza sativa Japonica Group]
gi|255676232|dbj|BAH93068.1| Os05g0313600 [Oryza sativa Japonica Group]
Length = 620
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 263/442 (59%), Gaps = 13/442 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKAC- 141
A VFN I + ++N +++ Y G+ ++ M+ +G + P++ T ++L AC
Sbjct: 182 ARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACR 241
Query: 142 --GDLRQVKGVHSLVVKSKDFNSVIHSL--TRLITFYCNFGDVKSAQLLFDQMTEKNVVT 197
GDL + V SK SL + L+ Y G++ A+ +FD + +K+VV
Sbjct: 242 DEGDLVLGRWVEEW---SKSAGMETDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVA 298
Query: 198 WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
W AMI G+ + E I LF M+ +GV +++TL VLSAC+ +GA ELG + + +
Sbjct: 299 WNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYAS 358
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
+ N +G AL DMYAKCG +++A+ VF+ + KNV +WN++I GLA +G G+EA++
Sbjct: 359 CRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQ 418
Query: 318 MFWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDL 376
F M+ G+KPDD+T I VL+AC HAGL++ GK F ++ ++++ P ++HY C+VD
Sbjct: 419 HFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDP 478
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFND 436
L R+ L+E ++ I +P + +AV+ G+LL AC NVE+ E + R+I+LEP N
Sbjct: 479 LARSGHLEEVWDFIEKIPDKVDAVMLGALLAACRKC---KNVEIGERVINRIIQLEPTNS 535
Query: 437 GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSE 496
NYV+ S IYA+ + DD+ KMR LM+ER + K PGCS +EI+ V EF GD ++
Sbjct: 536 WNYVVSSKIYASSGRLDDSAKMRGLMRERGVNKTPGCSWVEISGKVLEFYAGDEPQHGAD 595
Query: 497 EIYSMLEYVAISLREECYAARM 518
++Y +L+ + +R E Y +
Sbjct: 596 DMYQVLDLLVDEMRLEGYVPNL 617
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 146/269 (54%), Gaps = 7/269 (2%)
Query: 145 RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMING 204
R + V +++ D NS H++ LIT Y D +A+ +F+ + ++VV+W AM+
Sbjct: 144 RHLSPVAHALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKA 203
Query: 205 HVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
+ + E + R M +D V N +TL VL+AC + G LG+WV E+ +
Sbjct: 204 YGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMET 263
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+ +G+AL MY KCG I EA RVF +++K+V WN++I G A +G EA+ +F M+
Sbjct: 264 DSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMK 323
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEI--FYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
+G+ PD +TL VL+ACS G +E G E+ + + R Y NV LVD+ +
Sbjct: 324 KAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYN---NVYVGTALVDMYAKCG 380
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
LD+A EV R M + N W +L+ A
Sbjct: 381 DLDKAIEVFRKMRCK-NVASWNALICGLA 408
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 4/219 (1%)
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK 139
+IA A VF+ II+ A+N +I GYA+ G+ + I L+ M G+ PD T +L
Sbjct: 280 EIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLS 339
Query: 140 ACGDLRQVKGVHSL--VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVT 197
AC + ++ L + + ++ T L+ Y GD+ A +F +M KNV +
Sbjct: 340 ACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVAS 399
Query: 198 WTAMINGHVKQKNYREGIDLFRKMR-DSGVEVNELTLVSVLSACANLGASELGK-WVHEF 255
W A+I G E I F MR + G++ +++T + VLSAC + G + GK W +
Sbjct: 400 WNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSL 459
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
++ II + + + D A+ G++EE + + +K
Sbjct: 460 TSEFQIIPKIEHYSCMVDPLARSGHLEEVWDFIEKIPDK 498
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/464 (35%), Positives = 260/464 (56%), Gaps = 35/464 (7%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I+ + A +F+++ + +++ +I Y G G + + L+ M+ +G+ PD
Sbjct: 300 MIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPD 359
Query: 131 SFTYPILLKACGDLR---QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T LL AC + R QV+ VH+ ++I + +L+ FY + + A LF
Sbjct: 360 KITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVA-NKLVHFYSYYRALDDAYGLF 418
Query: 188 DQMTEKNVVTWTAMINGHVKQKNY----------------------------REGIDLFR 219
D M ++ V+W+ M+ G K +Y E + LF
Sbjct: 419 DGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFD 478
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
KMR+ GV +++ +V+V+ ACA LGA + + +++ + L+ LG A+ DM+AKCG
Sbjct: 479 KMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCG 538
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
+E A +F + EKNV +W+++I HG G +A+ +F M SGI P+ +TL+++L
Sbjct: 539 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 598
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSHAGL+E+G F M DY V +VKHY C+VDLL RA LDEA ++I +M +E +
Sbjct: 599 ACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDE 658
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
LWG+ L AC + D V LAE A L++L+P N G+Y+L+SNIYA +W+D K R
Sbjct: 659 GLWGAFLGACRTHKD---VVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTR 715
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
LM +R + K PG + IE+++ H+F VGD HP S+EIY ML+
Sbjct: 716 DLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLK 759
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 206/411 (50%), Gaps = 34/411 (8%)
Query: 16 NSANSHKNSNTATKSHH--------HLPLLQKCTHLVQFKQVHAQI-IKASFDNRTISDT 66
S N H ++K H ++ L C +L Q +QVHAQ + +N +++
Sbjct: 59 TSLNLHNREEESSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVVAN- 117
Query: 67 QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG 126
KLI + A+ +F+ + + +++ ++ G+A+ G + ++I G
Sbjct: 118 ---KLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCG 174
Query: 127 LDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
PD++T P +++AC DL+ ++ L+ Y +++ A+ L
Sbjct: 175 ARPDNYTLPFVIRACRDLKNLQ-------------------MALVDMYVKCREIEDARFL 215
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD+M E+++VTWT MI G+ + E + LF KMR+ GV +++ +V+V+ ACA LGA
Sbjct: 216 FDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAM 275
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
+ + +++ + L+ LG A+ DMYAKCG +E A +F + EKNV +W+++I
Sbjct: 276 HKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAY 335
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
HG G +A+ +F M SG+ PD +TL ++L AC + + + +++ + + + N
Sbjct: 336 GYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQV-HAQASVHGMLQN 394
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ LV R LD+AY + M + ++V W ++ A D N
Sbjct: 395 LIVANKLVHFYSYYRALDDAYGLFDGMCVR-DSVSWSVMVGGFAKVGDYMN 444
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 180/378 (47%), Gaps = 33/378 (8%)
Query: 61 RTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYT 120
R + + Q+A L++ V +I A +F+++ + +I GYAE G + + L+
Sbjct: 190 RDLKNLQMA-LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 248
Query: 121 QMIGNGLDPDSFTYPILLKACGDLRQVKGVHSL--VVKSKDFNSVIHSLTRLITFYCNFG 178
+M G+ PD ++ AC L + + ++ K F + T +I Y G
Sbjct: 249 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 308
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
V+SA+ +FD+M EKNV++W+AMI + R+ +DLFR M SG+ +++TL S+L
Sbjct: 309 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 368
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
AC N + VH + + ++ N + L Y+ +++A +F + ++ +
Sbjct: 369 ACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVS 428
Query: 299 WNSIIGGLAIHG--------------CG--------------EEAVKMFWQMQMSGIKPD 330
W+ ++GG A G CG E++ +F +M+ G+ PD
Sbjct: 429 WSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPD 488
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
V ++ V+ AC+ G + K + I ++R K + +V ++D+ + ++ A E+
Sbjct: 489 KVAMVTVVFACAKLGAMHKARTIDDYIQRK-KFQLDVILGTAMIDMHAKCGCVESAREIF 547
Query: 391 RNMPMEPNAVLWGSLLTA 408
M E N + W +++ A
Sbjct: 548 DRME-EKNVISWSAMIAA 564
>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/470 (35%), Positives = 269/470 (57%), Gaps = 12/470 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K VH I + + +T + L L + A +F+++ +N +I Y
Sbjct: 246 KIVHCIAIVSKLSGDLLVNTAVLSLYSKL---RSLVDARKLFDKMPEKDRVVWNIMIAAY 302
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSV 163
A G ++L+ M +G+ D FT ++ + L+ V K H+ ++++ +S
Sbjct: 303 AREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGS-DSQ 361
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ LI YC + SA +F+ MT+K+V++W+AMI G+VK + LF KM+
Sbjct: 362 VSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKS 421
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
G++ + + ++++L A ++GA E K++H + K + L AL YAKCG IE
Sbjct: 422 DGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEM 481
Query: 284 ALRVFK--IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
A R+F+ + +K++ WNS+I A HG + K++ +M+ S KPD VT + +LTAC
Sbjct: 482 AQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTAC 541
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
++GL+EKGKE F M Y +P+ +HY C+V+LL RA L+ EA E+++NMP++P+A +
Sbjct: 542 VNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARV 601
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
WG LL+AC +LAE A E+LI +EP N GNY+L+SNIYAA +WD KMR
Sbjct: 602 WGPLLSACKMHPGS---KLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSF 658
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
++ + + K PGCS +EIN V EF V D HP + +IY++L + + ++E
Sbjct: 659 LRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKE 708
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 184/383 (48%), Gaps = 27/383 (7%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASF-DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINP 94
L +C + +Q+HA+ I F N T+S +KLI+ N + ++ VF +I+P
Sbjct: 33 LFSRCNSIQHLQQIHARFILHGFHQNPTLS----SKLIDCYANLGLLNHSLQVFCSVIDP 88
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVH 151
+ FN ++R G R + +Y QM+ + PD TYP +L++C V + +H
Sbjct: 89 NLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIH 148
Query: 152 SLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
+VK D V+ T L Y + ++A LFD+ + K+ + W + + Q +
Sbjct: 149 GYLVKLGFDLFDVV--ATALAEMYEECIEFENAHQLFDKRSVKD-LGWPSSLTTEGPQND 205
Query: 211 YREGI-DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
EGI +F +M + + T ++L A L + +L K VH CI + KL
Sbjct: 206 NGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVH------CIAIVSKLSG 259
Query: 270 ------ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
A+ +Y+K + +A ++F + EK+ WN +I A G E +++F M
Sbjct: 260 DLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMA 319
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
SGI+ D T + V+++ + ++ GK+ ++ R+ + V + L+D+ C ++L
Sbjct: 320 RSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRN-GSDSQVSVHNSLIDMYCECKIL 378
Query: 384 DEAYEVIRNMPMEPNAVLWGSLL 406
D A ++ N + + + W +++
Sbjct: 379 DSACKIF-NWMTDKSVISWSAMI 400
>gi|125551786|gb|EAY97495.1| hypothetical protein OsI_19422 [Oryza sativa Indica Group]
Length = 620
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 263/442 (59%), Gaps = 13/442 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKAC- 141
A VFN I + ++N +++ Y G+ ++ M+ +G + P++ T ++L AC
Sbjct: 182 ARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACR 241
Query: 142 --GDLRQVKGVHSLVVKSKDFNSVIHSL--TRLITFYCNFGDVKSAQLLFDQMTEKNVVT 197
GDL + V SK SL + L+ Y G++ A+ +FD + +K+VV
Sbjct: 242 DEGDLVLGRWVEEW---SKSAGMETDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVA 298
Query: 198 WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
W AMI G+ + E I LF M+ +GV +++TL VLSAC+ +GA ELG + + +
Sbjct: 299 WNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYAS 358
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
+ N +G AL DMYAKCG +++A+ VF+ + KNV +WN++I GLA +G G+EA++
Sbjct: 359 CRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQ 418
Query: 318 MFWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDL 376
F M+ G+KPDD+T I VL+AC HAGL++ GK F ++ ++++ P ++HY C+VDL
Sbjct: 419 HFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDL 478
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFND 436
L R+ L+E ++ I +P + +AV+ G+LL AC NVE+ E + R+I+LEP N
Sbjct: 479 LARSGHLEEVWDFIEKIPDKVDAVMLGALLAACRKC---KNVEIGERVINRIIQLEPTNS 535
Query: 437 GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSE 496
NYV+ S IYA+ + DD+ KMR M+ER + K PGCS +EI+ V EF GD ++
Sbjct: 536 WNYVVSSKIYASSGRLDDSAKMRGPMRERGVNKTPGCSWVEISGKVLEFYAGDEPQHGAD 595
Query: 497 EIYSMLEYVAISLREECYAARM 518
++Y +L+ + +R E Y +
Sbjct: 596 DMYQVLDLLVDEMRLEGYVPNL 617
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 146/269 (54%), Gaps = 7/269 (2%)
Query: 145 RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMING 204
R + V +++ D NS H++ LIT Y D +A+ +F+ + ++VV+W AM+
Sbjct: 144 RHLSPVAHALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKA 203
Query: 205 HVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
+ + E + R M +D V N +TL VL+AC + G LG+WV E+ +
Sbjct: 204 YGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMET 263
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+ +G+AL MY KCG I EA RVF +++K+V WN++I G A +G EA+ +F M+
Sbjct: 264 DSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMK 323
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEI--FYNMRRDYKVEPNVKHYGCLVDLLCRAR 381
+G+ PD +TL VL+ACS G +E G E+ + + R Y NV LVD+ +
Sbjct: 324 KAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYN---NVYVGTALVDMYAKCG 380
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
LD+A EV R M + N W +L+ A
Sbjct: 381 DLDKAIEVFRKMRCK-NVASWNALICGLA 408
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 4/219 (1%)
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK 139
+IA A VF+ II+ A+N +I GYA+ G+ + I L+ M G+ PD T +L
Sbjct: 280 EIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLS 339
Query: 140 ACGDLRQVKGVHSL--VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVT 197
AC + ++ L + + ++ T L+ Y GD+ A +F +M KNV +
Sbjct: 340 ACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVAS 399
Query: 198 WTAMINGHVKQKNYREGIDLFRKMR-DSGVEVNELTLVSVLSACANLGASELGK-WVHEF 255
W A+I G E I F MR + G++ +++T + VLSAC + G + GK W +
Sbjct: 400 WNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSL 459
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
++ II + + + D+ A+ G++EE + + +K
Sbjct: 460 TSEFQIIPKIEHYSCMVDLLARSGHLEEVWDFIEKIPDK 498
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/420 (38%), Positives = 256/420 (60%), Gaps = 17/420 (4%)
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK---ACGDL 144
F+ + ++NT+I A+ GL +L++ M + + ++ ++ ACGDL
Sbjct: 127 FDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMP----EKNCVSWSAMVSGYVACGDL 182
Query: 145 -RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
V+ ++ ++S + + T +IT Y FG V+ A+ LF +M+ + +VTW AMI
Sbjct: 183 DAAVECFYAAPMRS------VITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIA 236
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
G+V+ +G+ LFR M ++GV+ N L+L SVL C+NL A +LGK VH+ V K +
Sbjct: 237 GYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSS 296
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+ G +L MY+KCG +++A +F + K+V WN++I G A HG G++A+++F +M+
Sbjct: 297 DTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMK 356
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
G+KPD +T +AVL AC+HAGL++ G + F MRRD+ +E +HY C+VDLL RA L
Sbjct: 357 KEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKL 416
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
EA ++I++MP +P+ ++G+LL AC N+ LAE A + L++L+P YV ++
Sbjct: 417 SEAVDLIKSMPFKPHPAIYGTLLGACRIHK---NLNLAEFAAKNLLELDPTIATGYVQLA 473
Query: 444 NIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
N+YAA+ +WD +RR MK+ N+VK PG S IEIN VVH F D HP I+ L+
Sbjct: 474 NVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLK 533
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 133/310 (42%), Gaps = 58/310 (18%)
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYRE------- 213
N+VI S +LI Y GD+ SA +F+ M K+ VTW +++ K+ + E
Sbjct: 39 NNVIAS-NKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFE 97
Query: 214 ---------------------GIDLFRKMRDSGVEVNELTLVSVLSACANLG-ASELGKW 251
G+ R DS + + +++SA A +G E +
Sbjct: 98 KIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRL 157
Query: 252 VHEFVNKNCI---------ILNDKLGAALTDMYA-----------------KCGYIEEAL 285
KNC+ + L AA+ YA K G +E A
Sbjct: 158 FSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAE 217
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
R+F+ + + + TWN++I G +G E+ +++F M +G+KP+ ++L +VL CS+
Sbjct: 218 RLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLS 277
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
++ GK++ + + + + LV + + L +A+E+ +P + + V W ++
Sbjct: 278 ALQLGKQV-HQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRK-DVVCWNAM 335
Query: 406 LTACASADDG 415
++ A G
Sbjct: 336 ISGYAQHGAG 345
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIH-GC 311
HEF N N +I ++KL A+ Y +CG I+ A+RVF+ + K+ TWNSI+ A G
Sbjct: 34 HEF-NNNNVIASNKLIAS----YVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGH 88
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
E A ++F ++ +P+ V+ +L H + + F +M +V +
Sbjct: 89 FEYARQLFEKIP----QPNTVSYNIMLACHWHHLGVHDARGFFDSMPLK-----DVASWN 139
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA-CASADDGANVE 419
++ L + L+ EA + MP E N V W ++++ A D A VE
Sbjct: 140 TMISALAQVGLMGEARRLFSAMP-EKNCVSWSAMVSGYVACGDLDAAVE 187
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQVH + K + T + T L + + A +F QI +N +I GY
Sbjct: 283 KQVHQLVCKCPLSSDTTAGTSLVSMYS---KCGDLKDAWELFIQIPRKDVVCWNAMISGY 339
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK-GVHSLVVKSKDF 160
A+ G G + ++L+ +M GL PD T+ +L AC V GV +DF
Sbjct: 340 AQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDF 394
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/476 (36%), Positives = 267/476 (56%), Gaps = 22/476 (4%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN-PSTFAFNTVIRG 105
KQ+H Q+IK D T L+ + S+I A +F + + ++ +I G
Sbjct: 314 KQLHCQVIKNGSDFDLNIKT---ALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISG 370
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIH 165
Y + G R + L+ QM G+ P+ FTY +L A + + +H+LVVK+ NS
Sbjct: 371 YVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQ-IHALVVKTNYENSPSV 429
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
T L Y GD A +F+ + EK++V W+AM++G+ + + + +F ++ G
Sbjct: 430 G-TALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEG 488
Query: 226 VEVNELTLVSVLSACANLGAS-ELGKWVHE------FVNKNCIILNDKLGAALTDMYAKC 278
VE NE T SVL+ACA AS E GK H F N C+ +AL MYAK
Sbjct: 489 VEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCV------SSALVTMYAKR 542
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G IE A VFK +++++ +WNS+I G A HGCG++++K+F +M+ ++ D +T I V+
Sbjct: 543 GNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVI 602
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
+AC+HAGL+ +G+ F M +DY + P ++HY C+VDL RA +L++A ++I MP
Sbjct: 603 SACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAG 662
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
A +W +LL AC NV+L E+A E+LI L+P + YVL+SNIYA W + K+
Sbjct: 663 ATIWRTLLAACRVH---LNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKV 719
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
R+LM + + K G S IE+ + FM GD HP S+ IY LE ++I L++ Y
Sbjct: 720 RKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGY 775
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 205/418 (49%), Gaps = 22/418 (5%)
Query: 47 KQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
KQVH Q IK F + D + L++ + + + VF+++ + ++ +++ G
Sbjct: 112 KQVHCQCIKCGF----VEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPIL---LKACGDLRQVKGVHSLVVKSKDFNS 162
Y + GL + ++L++QM G+ P+ FT+ + L A G + + VH++V+KS +S
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS-GLDS 226
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
I ++ Y V A+ +FD M +N V+W +MI G V E +LF +MR
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
GV++ + +V+ CAN+ K +H V KN + + AL Y+KC I+
Sbjct: 287 LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEID 346
Query: 283 EALRVFKIVLE-KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
+A ++F ++ +NV +W +II G +G + A+ +F QM+ G++P+ T +LTA
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTAN 406
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
+ + + ++ +Y+ P+V L D + +EA ++ + E + V
Sbjct: 407 AAVSPSQIHALV---VKTNYENSPSVGT--ALSDSYSKIGDANEAAKIFELID-EKDIVA 460
Query: 402 WGSLLTACASADD--GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
W ++L+ A D GA ++A E +EP N+ + + N AA + GK
Sbjct: 461 WSAMLSGYAQMGDIEGAVKIFLQLAKE---GVEP-NEFTFSSVLNACAAPTASVEQGK 514
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 146/298 (48%), Gaps = 7/298 (2%)
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKACGDL--RQV-KGVHSLVVKSKDFNSVIHSLTRLI 171
+ L+ + +G D + +LK CG L R V K VH +K F + T L+
Sbjct: 76 ALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKC-GFVEDVSVGTSLV 134
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
Y V+ + +FD+M KNVV+WT+++ G+ + + + LF +M+ G++ N
Sbjct: 135 DMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPF 194
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
T +VL A GA E G VH V K+ + +G ++ +MY+K + +A VF +
Sbjct: 195 TFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSM 254
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
+N +WNS+I G +G EA ++F++M++ G+K V+ C++ + K
Sbjct: 255 ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAK 314
Query: 352 EIFYN-MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
++ ++ + N+K L+ + +D+A+++ M N V W ++++
Sbjct: 315 QLHCQVIKNGSDFDLNIKT--ALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISG 370
>gi|3128231|gb|AAC26711.1| hypothetical protein [Arabidopsis thaliana]
gi|20197159|gb|AAM14947.1| hypothetical protein [Arabidopsis thaliana]
Length = 617
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 264/474 (55%), Gaps = 17/474 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
+ VH+ + K + D + LI Q+ YA +F++I T ++N++I G
Sbjct: 148 RSVHSSLFKVGLER----DVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISG 203
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNS 162
Y+EAG + L+ +M G +PD T +L AC GDLR + + + + K S
Sbjct: 204 YSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLS 263
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
++LI+ Y GD+ SA+ +F+QM +K+ V WTAMI + + E LF +M
Sbjct: 264 TFLG-SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEME 322
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+GV + TL +VLSAC ++GA ELGK + ++ + N + L DMY KCG +E
Sbjct: 323 KTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVE 382
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
EALRVF+ + KN TWN++I A G +EA+ +F +M + P D+T I VL+AC
Sbjct: 383 EALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSACV 439
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
HAGL+ +G F+ M + + P ++HY ++DLL RA +LDEA+E + P +P+ ++
Sbjct: 440 HAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIML 499
Query: 403 GSLLTACASADDGANVELAEIAMERLIKL-EPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
++L AC D V + E AM L+++ E N GNYV+ SN+ A WD++ KMR L
Sbjct: 500 AAILGACHKRKD---VAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRAL 556
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS-EEIYSMLEYVAISLREECY 514
M++R +VK PGCS IEI + EF+ G C E+ S+ + + ++ E Y
Sbjct: 557 MRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERY 610
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/381 (33%), Positives = 204/381 (53%), Gaps = 14/381 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LL+KC + Q +Q+ AQ++ S + LI V Y+ +F+
Sbjct: 37 LFLLKKCISVNQLRQIQAQMLLHSVEKPNF-------LIPKAVELGDFNYSSFLFSVTEE 89
Query: 94 PSTFAFNTVIRGYAEAGLGHRG-IQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
P+ ++FN +IRG H + LY +M +GL PD FTY + AC L ++ +
Sbjct: 90 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 149
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
VHS + K +H LI Y G V A+ LFD++TE++ V+W +MI+G+ +
Sbjct: 150 VHSSLFKV-GLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAG 208
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
++ +DLFRKM + G E +E TLVS+L AC++LG G+ + E I L+ LG+
Sbjct: 209 YAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGS 268
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
L MY KCG ++ A RVF +++K+ W ++I + +G EA K+F++M+ +G+ P
Sbjct: 269 KLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSP 328
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D TL VL+AC G +E GK+I + ++ N+ LVD+ + ++EA V
Sbjct: 329 DAGTLSTVLSACGSVGALELGKQI-ETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 387
Query: 390 IRNMPMEPNAVLWGSLLTACA 410
MP++ N W +++TA A
Sbjct: 388 FEAMPVK-NEATWNAMITAYA 407
>gi|356565111|ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/469 (37%), Positives = 261/469 (55%), Gaps = 52/469 (11%)
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKG 149
NP+T +N VIRGYA + + ++ YT M+ + +PD FT+ LL AC G +++ +
Sbjct: 3 NPTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEGEQ 62
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
VH+ V+ K + S + T LITFY G V+ A+ +FD M +++VV+W +M+ G+V+
Sbjct: 63 VHATVL-VKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRCA 121
Query: 210 NY-------------------------------REGIDLFRKMRDSGVEVNELTLVSVLS 238
++ R+ + LF +MR + VE++++ LV+ LS
Sbjct: 122 DFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAALS 181
Query: 239 ACANLGASELGKWVHEFVNKNCIILN-----DKLGAALTDMYAKCGYIEEALRVFKIVLE 293
ACA LG +LG+W+H +V + + N +L AL MYA CG + EA +VF +
Sbjct: 182 ACAELGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMPR 241
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQM-----QMSGIKPDDVTLIAVLTACSHAGLIE 348
K+ +W S+I A G G+EA+ +F M ++ G++PD++T I VL ACSHAG ++
Sbjct: 242 KSTVSWTSMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAGFVD 301
Query: 349 KGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+G +IF +M+ + + P+++HYGC+VDLL RA LLDEA +I MP+ PN +WG+LL
Sbjct: 302 EGHQIFASMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPNDAIWGALLGG 361
Query: 409 CASADDGANVELAEIAMERLIKLEPFND---GNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
C N ELA +L+ E D G VL+SNIYA +W D +R+ M E
Sbjct: 362 CRIHR---NSELASQVENKLVP-ELNGDQAAGYLVLLSNIYAFGQRWQDVITVRQKMIEM 417
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+ K PG S I+IN VVH F+ GD H S IY L V E Y
Sbjct: 418 GVKKPPGRSWIQINGVVHNFIAGDMTHKHSSFIYETLRDVTKQANLEGY 466
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 36/261 (13%)
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG 249
M W +I G+ + + ++ + M S E + T S+LSACA G + G
Sbjct: 1 MDNPTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEG 60
Query: 250 KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA-- 307
+ VH V N + +L YA G +E A VF + +++V +WNS++ G
Sbjct: 61 EQVHATVLVKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRC 120
Query: 308 ------------------------IHGCG-----EEAVKMFWQMQMSGIKPDDVTLIAVL 338
+ GC +A+ +F +M+ + ++ D V L+A L
Sbjct: 121 ADFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAAL 180
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKV----EPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+AC+ G ++ G+ I + +++ + +P+V+ L+ + +L EAY+V MP
Sbjct: 181 SACAELGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMP 240
Query: 395 MEPNAVLWGSLLTACASADDG 415
+ + V W S++ A A G
Sbjct: 241 RK-STVSWTSMIMAFAKQGLG 260
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/529 (33%), Positives = 294/529 (55%), Gaps = 19/529 (3%)
Query: 1 MLKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHL---VQFKQVHAQIIKAS 57
M+ L N S NS + + + + L C L + +Q H + IK
Sbjct: 175 MITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLG 234
Query: 58 FD-NRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLG-HRG 115
D + ++S+T LA E+ S++A VF+ ++ ++NTVI A++G
Sbjct: 235 LDMDVSVSNTLLALYAET----SRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEA 290
Query: 116 IQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKS--KDFNSVIHSLTRL 170
I+++ +M+ G P+ T+ LL L K +H+L++K KD N++ ++L
Sbjct: 291 IEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENAL--- 347
Query: 171 ITFYCNFGDVKSAQLLFDQMTEK-NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
+ Y G++++ + +F +M+E+ + V+W +MI+G++ + + +DL M G ++
Sbjct: 348 LACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLD 407
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
T +VLSACA + E G VH + C+ + +G+AL DMY+KCG I+ A R F
Sbjct: 408 CFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFN 467
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
++ +N+ +WNS+I G A HG G+ A+++F +M++SG PD +T + VL+ACSH GL+++
Sbjct: 468 LMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDE 527
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
G E F +M Y + P V+HY C+VDLL RA LD+ I MP++PN ++W ++L AC
Sbjct: 528 GFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGAC 587
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
+G EL A E L ++P N NYVL+SN+YA+ +W+D + RR M+E + K
Sbjct: 588 CRG-NGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKK 646
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
GCS + + D VH F+ GD HP IY+ L+ + +R+ Y ++
Sbjct: 647 EAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQI 695
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 187/403 (46%), Gaps = 34/403 (8%)
Query: 50 HAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE 108
H ++K FD SD L LI V A +F+++ + + + +I GY +
Sbjct: 23 HLNVLKHGFD----SDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQ 78
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD----LRQVKGVHSLVVKSKDFNSVI 164
G+ + +MI G P+ F + ++AC + R+ + VH +++ ++ +
Sbjct: 79 NGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKV 138
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
LI Y GD+ A+ +F M +K+ V+W +MI G + K + + + + MR +
Sbjct: 139 AVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKT 198
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
G+ + L+S LS+CA+LG LG+ H K + ++ + L +YA+ + E
Sbjct: 199 GLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAEC 258
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCG-EEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
+VF +LE++ +WN++IG LA G EA+++F +M +G P+ VT I +L S
Sbjct: 259 QKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSS 318
Query: 344 AGLIEKGKEIF-----YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
+ +I YN++ D +E L+ ++ ++ E+ M +
Sbjct: 319 LSTSKLSHQIHALILKYNVKDDNAIE------NALLACYGKSGEMENCEEIFSRMSERRD 372
Query: 399 AVLWGSLLTA-------CASADDGANVELAEIAMERLIKLEPF 434
V W S+++ C + D L + M+R +L+ F
Sbjct: 373 EVSWNSMISGYIHNELLCKAMD------LVWLMMQRGQRLDCF 409
>gi|334184678|ref|NP_180987.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546770|sp|O64705.2|PP184_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g34400
gi|330253874|gb|AEC08968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 264/474 (55%), Gaps = 17/474 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
+ VH+ + K + D + LI Q+ YA +F++I T ++N++I G
Sbjct: 152 RSVHSSLFKVGLER----DVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISG 207
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNS 162
Y+EAG + L+ +M G +PD T +L AC GDLR + + + + K S
Sbjct: 208 YSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLS 267
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
++LI+ Y GD+ SA+ +F+QM +K+ V WTAMI + + E LF +M
Sbjct: 268 TFLG-SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEME 326
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+GV + TL +VLSAC ++GA ELGK + ++ + N + L DMY KCG +E
Sbjct: 327 KTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVE 386
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
EALRVF+ + KN TWN++I A G +EA+ +F +M + P D+T I VL+AC
Sbjct: 387 EALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSACV 443
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
HAGL+ +G F+ M + + P ++HY ++DLL RA +LDEA+E + P +P+ ++
Sbjct: 444 HAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIML 503
Query: 403 GSLLTACASADDGANVELAEIAMERLIKL-EPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
++L AC D V + E AM L+++ E N GNYV+ SN+ A WD++ KMR L
Sbjct: 504 AAILGACHKRKD---VAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRAL 560
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS-EEIYSMLEYVAISLREECY 514
M++R +VK PGCS IEI + EF+ G C E+ S+ + + ++ E Y
Sbjct: 561 MRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERY 614
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/381 (33%), Positives = 204/381 (53%), Gaps = 14/381 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LL+KC + Q +Q+ AQ++ S + LI V Y+ +F+
Sbjct: 41 LFLLKKCISVNQLRQIQAQMLLHSVEKPNF-------LIPKAVELGDFNYSSFLFSVTEE 93
Query: 94 PSTFAFNTVIRGYAEAGLGHRG-IQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
P+ ++FN +IRG H + LY +M +GL PD FTY + AC L ++ +
Sbjct: 94 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 153
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
VHS + K +H LI Y G V A+ LFD++TE++ V+W +MI+G+ +
Sbjct: 154 VHSSLFKV-GLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAG 212
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
++ +DLFRKM + G E +E TLVS+L AC++LG G+ + E I L+ LG+
Sbjct: 213 YAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGS 272
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
L MY KCG ++ A RVF +++K+ W ++I + +G EA K+F++M+ +G+ P
Sbjct: 273 KLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSP 332
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D TL VL+AC G +E GK+I + ++ N+ LVD+ + ++EA V
Sbjct: 333 DAGTLSTVLSACGSVGALELGKQI-ETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 390 IRNMPMEPNAVLWGSLLTACA 410
MP++ N W +++TA A
Sbjct: 392 FEAMPVK-NEATWNAMITAYA 411
>gi|297823227|ref|XP_002879496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325335|gb|EFH55755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 617
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/455 (37%), Positives = 254/455 (55%), Gaps = 14/455 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+ VH+ + K + D LI + YA VF++I + T ++N++I GY
Sbjct: 149 RSVHSSLFKVGLER---DDHISHSLIMMYAKCGLVGYARKVFDEITDRVTVSWNSMISGY 205
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSV 163
+EAG + L+ +M G +PD T +L AC GDL + + + + K S
Sbjct: 206 SEAGRAKDAMDLFRKMEEEGFEPDERTLVSMLGACAHLGDLTTGRLLEKMAITKKIGLST 265
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
++LIT Y GD+ SA+ +F+QM +K+ V W AMI + + E LF +M
Sbjct: 266 FLG-SKLITMYGKCGDLDSARRVFNQMIKKDRVAWNAMITVYSQNGKSSEAFKLFFEMEK 324
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
+GV + TL +VLSAC ++GA ELGK + ++ + N + L DMY KCG+IEE
Sbjct: 325 TGVSPDAGTLSTVLSACGSVGALELGKRIETHASEISLQHNIYVATGLVDMYGKCGHIEE 384
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
ALRVF+ + KN TWN++I A G +EA+ +F QM + P DVT I VL+AC H
Sbjct: 385 ALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDQMP---VPPSDVTFIGVLSACVH 441
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
AGL+++G F+ M + + P ++HY ++DLL RA LLDEA+E + P +P+ ++
Sbjct: 442 AGLVDQGCRYFHEMSSLFGLVPKIEHYTNIIDLLSRAGLLDEAWEFMERFPGKPDEIMLA 501
Query: 404 SLLTACASADDGANVELAEIAMERLIKL-EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
++L AC D V + E AM L+++ E N GNYV+ S + A WD++ KMR LM
Sbjct: 502 AILGACHKRKD---VAIREKAMRMLMEMKEAKNAGNYVISSKVLADMKMWDESAKMRALM 558
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEE 497
++R +VK PGCS IEIN + EF+ G C E
Sbjct: 559 RDRGVVKTPGCSWIEINGELMEFLAGSDYLQCGRE 593
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 208/384 (54%), Gaps = 20/384 (5%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L LL+KC + Q +++ AQ++ S + LI V YA + +
Sbjct: 38 LFLLKKCISVNQLREIQAQMLLHSVEKPNF-------LIPKAVELGDFNYASFLLSVTEE 90
Query: 94 PSTFAFNTVIRGYAEAGLGHRG-IQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
P+ ++FN +IRG H G + LY +M +GL PD+FTY + ACG ++ +
Sbjct: 91 PNHYSFNYMIRGLTNIWNDHEGALSLYRRMKYSGLKPDNFTYNFVFIACGKREEIGVGRS 150
Query: 150 VHSLVVK---SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
VHS + K +D + + HSL I Y G V A+ +FD++T++ V+W +MI+G+
Sbjct: 151 VHSSLFKVGLERD-DHISHSL---IMMYAKCGLVGYARKVFDEITDRVTVSWNSMISGYS 206
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ ++ +DLFRKM + G E +E TLVS+L ACA+LG G+ + + I L+
Sbjct: 207 EAGRAKDAMDLFRKMEEEGFEPDERTLVSMLGACAHLGDLTTGRLLEKMAITKKIGLSTF 266
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
LG+ L MY KCG ++ A RVF +++K+ WN++I + +G EA K+F++M+ +G
Sbjct: 267 LGSKLITMYGKCGDLDSARRVFNQMIKKDRVAWNAMITVYSQNGKSSEAFKLFFEMEKTG 326
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
+ PD TL VL+AC G +E GK I + ++ N+ LVD+ + ++EA
Sbjct: 327 VSPDAGTLSTVLSACGSVGALELGKRI-ETHASEISLQHNIYVATGLVDMYGKCGHIEEA 385
Query: 387 YEVIRNMPMEPNAVLWGSLLTACA 410
V MP++ N W +++TA A
Sbjct: 386 LRVFEAMPVK-NEATWNAMITAYA 408
>gi|357150199|ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/514 (33%), Positives = 289/514 (56%), Gaps = 47/514 (9%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE-SLVNSSQIAYAHLVFNQIINP 94
+L +C L KQ+H + + + R S + +L+ + + S + YA +F+ +P
Sbjct: 15 VLSRCATLAHLKQLHGRSVVTA---RAASQSTTFQLLRFASLRLSCLPYARRLFDSTPHP 71
Query: 95 STFAFNTVIRGYAEAGL----GHRGIQLYTQMIGNGLD-PDSFTYPILLKA-CG-DLRQV 147
+ F ++ ++ YA A GH + L+ +M+ G P+ F YP++L+A C ++ V
Sbjct: 72 NVFLYSAMLSAYAAASPAQAYGHDALALFLRMLRRGRPAPNQFVYPLVLRAACAIGVQLV 131
Query: 148 KGVHSLVVKS--------------------------KDFNSV----IHSLTRLITFYCNF 177
+ +HS KS K F+ + + S T L++ Y
Sbjct: 132 RSIHSHACKSGFHAYDVIRTSLLDGYSRYGMMLDARKLFDGLTERNVISWTALVSGYARA 191
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
G + A +LFD+M E++V W AMI G + + E + + +M D G ++N T+ VL
Sbjct: 192 GKIGDAIVLFDRMPERDVAAWNAMITGCTQNGLFVEAVGICSRMVDEGFQLNGTTVSCVL 251
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
SAC +LG ++GK VH + ++C+ + L DMY KCG ++EA +F ++++
Sbjct: 252 SACGHLGMLKIGKVVHGYAWRSCVGFGSSVVNGLIDMYGKCGNLKEARWMFDEFSDRSLT 311
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
TWNS+I LA+HG + A+ +F +M+ GI+PD VT + +L AC+H G +++G F M
Sbjct: 312 TWNSLINCLALHGHSKSAIAVFDEMRDEGIEPDVVTFVGLLNACTHGGFVDEGLTYFKLM 371
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
+ ++EP ++HYGC+VDLL RA ++A VI +M ++P+ V+WGSLL AC +
Sbjct: 372 CDELRIEPEIEHYGCIVDLLGRAGRFEDAMNVINDMKVQPDEVIWGSLLNACRTH---RQ 428
Query: 418 VELAEIAMERLIKLEPFNDGNYVLM-SNIYAAKAQWDDAGKMRRLMKERNIVKN-PGCSV 475
+ELAE ++ +L++L P N+ NYV+M +N+Y+ W++ K+R+LMKE + K PGCS
Sbjct: 429 LELAEFSVRKLLQLNP-NNANYVVMLANLYSEGGSWEEVTKIRKLMKEDIMGKKLPGCSW 487
Query: 476 IEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
IE++ H F GD HP SE+IY L+ +A S+
Sbjct: 488 IEVDRKTHRFYSGDDAHPESEDIYDTLDELAASM 521
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 277/495 (55%), Gaps = 79/495 (15%)
Query: 53 IIKASFDNRTISDTQLAKLI--ESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAG 110
+I F++ T + L +LI S+ S +AYAH +F I P TF +NT+IRG A++
Sbjct: 1 MIVKGFNSNT---SALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSP 57
Query: 111 LGHRGIQLYT-----------------------------------QMIGNGLDPDSFTYP 135
I LY+ ++ G + ++F
Sbjct: 58 SPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRN 117
Query: 136 ILL---KACGDLRQVKGVHS----------------------LVVKSKDFNSV----IHS 166
L+ CGDL + + L V + F+ + + S
Sbjct: 118 TLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVS 177
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
+IT Y G+++SA+ LFD++ +++VVTW AMI G+V + ++ +++F +MR G
Sbjct: 178 WNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGE 237
Query: 227 EVNELTLVSVLSACANLGASELGKWVH----EFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+E+T++S+LSAC +LG + G+ +H E ++ +L LG AL DMYAKCG I
Sbjct: 238 LPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVL---LGNALIDMYAKCGSIV 294
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
AL VF+ + EK+V TWNS++GGLA HG E+++ +F +M+ I+PD++T + VL ACS
Sbjct: 295 RALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACS 354
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
HAG +E+G++ F MR +Y +EPN++HYGC+VDLL RA LL+EA++ I M +EPNA++W
Sbjct: 355 HAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVW 414
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
+LL AC NVEL A +L+K+ G+YVL+SNIYA++ +WD K+R+LM
Sbjct: 415 RTLLGACRIH---GNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLM 471
Query: 463 KERNIVKNPGCSVIE 477
+ + K GCS+IE
Sbjct: 472 DDSGVRKEAGCSLIE 486
>gi|22331393|ref|NP_189507.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273574|sp|Q9LJI9.1|PP260_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g28660
gi|9294280|dbj|BAB02182.1| unnamed protein product [Arabidopsis thaliana]
gi|20259531|gb|AAM13885.1| unknown protein [Arabidopsis thaliana]
gi|24030460|gb|AAN41382.1| unknown protein [Arabidopsis thaliana]
gi|332643950|gb|AEE77471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 279/483 (57%), Gaps = 16/483 (3%)
Query: 38 QKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVN-SSQIAYAHLVFNQIINPST 96
Q+C + Q K H+ I T + ++L L N + YA +F+ I P++
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 97 FAFNTVIRGYAEAGLGHRGIQLYTQMIGN---GLDPDSFTYPILLKACGD---LRQVKGV 150
F ++T+IR + + H G++ + M+ + P T+ L+ AC K +
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQI 138
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H VVK+ F S H T ++ Y + A+ +FD++ + +VV W ++NG+V+
Sbjct: 139 HCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGL 198
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK-LGA 269
EG+++F++M G+E +E ++ + L+ACA +GA GKW+HEFV K I +D +G
Sbjct: 199 GSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGT 258
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS-GIK 328
AL DMYAKCG IE A+ VF+ + +NV +W ++IGG A +G ++A +++ GIK
Sbjct: 259 ALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIK 318
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD V L+ VL AC+H G +E+G+ + NM Y + P +HY C+VDL+CRA LD+A +
Sbjct: 319 PDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALD 378
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN----DGNYVLMSN 444
+I MPM+P A +WG+LL C + NVEL E+A++ L+ LE N + V +SN
Sbjct: 379 LIEKMPMKPLASVWGALLNGCRTHK---NVELGELAVQNLLDLEKGNVEEEEAALVQLSN 435
Query: 445 IYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEY 504
IY + + +A K+R ++++R I K PG S++E++ +V +F+ GD HP +I++++
Sbjct: 436 IYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHL 495
Query: 505 VAI 507
+++
Sbjct: 496 LSV 498
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/478 (34%), Positives = 265/478 (55%), Gaps = 37/478 (7%)
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
++D ++ L++ + + I A +F++ + N + Y GL + ++ M
Sbjct: 269 VNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328
Query: 123 IGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKS---------------------- 157
+ +G+ PD + + +C LR + K H V+++
Sbjct: 329 MDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388
Query: 158 --------KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+ N + + ++ Y G+V +A F+ M EKN+V+W +I+G V+
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448
Query: 210 NYREGIDLFRKMRDS-GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ E I++F M+ GV + +T++S+ SAC +LGA +L KW++ ++ KN I L+ +LG
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG 508
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
L DM+++CG E A+ +F + ++V W + IG +A+ G E A+++F M G+K
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK 568
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD V + LTACSH GL+++GKEIFY+M + + V P HYGC+VDLL RA LL+EA +
Sbjct: 569 PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQ 628
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
+I +MPMEPN V+W SLL AC NVE+A A E++ L P G+YVL+SN+YA+
Sbjct: 629 LIEDMPMEPNDVIWNSLLAACRVQ---GNVEMAAYAAEKIQVLAPERTGSYVLLSNVYAS 685
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
+W+D K+R MKE+ + K PG S I+I HEF GD HP I +ML+ V+
Sbjct: 686 AGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 206/385 (53%), Gaps = 24/385 (6%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF-NQIINPS 95
L+ C + + K H + K DN + T+L L +++A VF N +
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG----VH 151
F +N++IRGYA +GL + I L+ +M+ +G+ PD +T+P L AC R KG +H
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR-AKGNGIQIH 157
Query: 152 SLVVK---SKDF---NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
L+VK +KD NS++H FY G++ SA+ +FD+M+E+NVV+WT+MI G+
Sbjct: 158 GLIVKMGYAKDLFVQNSLVH-------FYAECGELDSARKVFDEMSERNVVSWTSMICGY 210
Query: 206 VKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
++ ++ +DLF +M RD V N +T+V V+SACA L E G+ V+ F+ + I +N
Sbjct: 211 ARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 270
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
D + +AL DMY KC I+ A R+F N+ N++ G EA+ +F M
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD 330
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
SG++PD +++++ +++CS I GK Y +R ++ N+ + L+D+ +
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN--ALIDMYMKCHRQ 388
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTA 408
D A+ + M V W S++
Sbjct: 389 DTAFRIFDRMS-NKTVVTWNSIVAG 412
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 172/369 (46%), Gaps = 43/369 (11%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
Q+H I+K + L + ++ A VF+++ + ++ ++I GYA
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSL---VHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 108 EAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKACG---DLRQVKGVHSLVVKSK-DFNS 162
+ L+ +M+ + + P+S T ++ AC DL + V++ + S + N
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
++ S + CN DV A+ LFD+ N+ AM + +V+Q RE + +F M
Sbjct: 272 LMVSALVDMYMKCNAIDV--AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
DSGV + ++++S +S+C+ L GK H +V +N D + AL DMY KC +
Sbjct: 330 DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHG-------------------------------C 311
A R+F + K V TWNSI+ G +G
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSL 449
Query: 312 GEEAVKMFWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
EEA+++F MQ G+ D VT++++ +AC H G ++ K I+Y + ++ ++ +V+
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLG 508
Query: 371 GCLVDLLCR 379
LVD+ R
Sbjct: 509 TTLVDMFSR 517
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/478 (34%), Positives = 265/478 (55%), Gaps = 37/478 (7%)
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
++D ++ L++ + + I A +F++ + N + Y GL + ++ M
Sbjct: 269 VNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328
Query: 123 IGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKS---------------------- 157
+ +G+ PD + + +C LR + K H V+++
Sbjct: 329 MDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388
Query: 158 --------KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+ N + + ++ Y G+V +A F+ M EKN+V+W +I+G V+
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448
Query: 210 NYREGIDLFRKMRDS-GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ E I++F M+ GV + +T++S+ SAC +LGA +L KW++ ++ KN I L+ +LG
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG 508
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
L DM+++CG E A+ +F + ++V W + IG +A+ G E A+++F M G+K
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK 568
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD V + LTACSH GL+++GKEIFY+M + + V P HYGC+VDLL RA LL+EA +
Sbjct: 569 PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQ 628
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
+I +MPMEPN V+W SLL AC NVE+A A E++ L P G+YVL+SN+YA+
Sbjct: 629 LIEDMPMEPNDVIWNSLLAACRVQ---GNVEMAAYAAEKIQVLAPERTGSYVLLSNVYAS 685
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
+W+D K+R MKE+ + K PG S I+I HEF GD HP I +ML+ V+
Sbjct: 686 AGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 206/385 (53%), Gaps = 24/385 (6%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF-NQIINPS 95
L+ C + + K H + K DN + T+L L +++A VF N +
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG----VH 151
F +N++IRGYA +GL + I L+ +M+ +G+ PD +T+P L AC R KG +H
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR-AKGNGIQIH 157
Query: 152 SLVVK---SKDF---NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
L+VK +KD NS++H FY G++ SA+ +FD+M+E+NVV+WT+MI G+
Sbjct: 158 GLIVKMGYAKDLFVQNSLVH-------FYAECGELDSARKVFDEMSERNVVSWTSMICGY 210
Query: 206 VKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
++ ++ +DLF +M RD V N +T+V V+SACA L E G+ V+ F+ + I +N
Sbjct: 211 ARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 270
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
D + +AL DMY KC I+ A R+F N+ N++ G EA+ +F M
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD 330
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
SG++PD +++++ +++CS I GK Y +R ++ N+ + L+D+ +
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN--ALIDMYMKCHRQ 388
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTA 408
D A+ + M V W S++
Sbjct: 389 DTAFRIFDRMS-NKTVVTWNSIVAG 412
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 177/383 (46%), Gaps = 43/383 (11%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
Q+H I+K + L + ++ A VF+++ + ++ ++I GYA
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSL---VHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 108 EAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKACG---DLRQVKGVHSLVVKSK-DFNS 162
+ L+ +M+ + + P+S T ++ AC DL + V++ + S + N
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
++ S + CN DV A+ LFD+ N+ AM + +V+Q RE + +F M
Sbjct: 272 LMVSALVDMYMKCNAIDV--AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
DSGV + ++++S +S+C+ L GK H +V +N D + AL DMY KC +
Sbjct: 330 DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHG-------------------------------C 311
A R+F + K V TWNSI+ G +G
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSL 449
Query: 312 GEEAVKMFWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
EEA+++F MQ G+ D VT++++ +AC H G ++ K I+Y + ++ ++ +V+
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLG 508
Query: 371 GCLVDLLCRARLLDEAYEVIRNM 393
LVD+ R + A + ++
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSL 531
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 243/423 (57%), Gaps = 21/423 (4%)
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVV 155
+ VI GY++ G H + L+ QMI +G P+ T +L AC G Q +H+ +
Sbjct: 369 WTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSL 428
Query: 156 KS------KDFNSVIHSL---TRLITFYCNFGDVKSAQLLFDQ--MTEKNVVTWTAMING 204
K+ DF L LI Y K+A+ +FD + E+NVVTWT MI G
Sbjct: 429 KNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG 488
Query: 205 HVKQKNYREGIDLFRKM--RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
H + + + + LF +M GV N T+ +L ACA+L A +GK +H +V ++
Sbjct: 489 HAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRY 548
Query: 263 LNDKLGAA--LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ A L DMY+KCG ++ A VF + +K+ +W S++ G +HG G EA+ +F
Sbjct: 549 ESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFD 608
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M+ +G PDD+T + VL ACSH G++++G F +M DY + P +HY C +DLL R+
Sbjct: 609 KMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARS 668
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
LD+A+ +++MPMEP AV+W +LL+AC +NVELAE A+ +L+++ NDG+Y
Sbjct: 669 GRLDKAWRTVKDMPMEPTAVVWVALLSACRVH---SNVELAEHALNKLVEMNAENDGSYT 725
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYS 500
L+SNIYA +W D ++R LMK+ I K PGCS ++ F VGD HP S +IY+
Sbjct: 726 LISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYA 785
Query: 501 MLE 503
+LE
Sbjct: 786 LLE 788
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 203/457 (44%), Gaps = 75/457 (16%)
Query: 32 HHLPLLQKCTHLVQFKQVHAQIIKASFDNRT----------------ISDTQLAK-LIES 74
H LL++C Q+H QII + + IS L ++ S
Sbjct: 39 HFASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVAS 98
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
+ YA LV ++ +N +IR + + G I + +M+ G PD FT
Sbjct: 99 YLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTL 158
Query: 135 PILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
P +LKACG+L R H L+ F S + L+ Y G ++ A ++FD++T
Sbjct: 159 PHVLKACGELPSYRCGSAFHGLIC-CNGFESNVFICNALVAMYSRCGSLEEASMIFDEIT 217
Query: 192 EK---NVVTWTAMINGHVKQKNYREGIDLFRKM------RDSGVEVNELTLVSVLSACAN 242
++ +V++W ++++ HVK N +DLF KM + + + +++V++L AC +
Sbjct: 218 QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 277
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN-- 300
L A K VH +N + +G AL D YAKCG +E A++VF ++ K+V +WN
Sbjct: 278 LKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 337
Query: 301 ---------------------------------SIIGGLAIHGCGEEAVKMFWQMQMSGI 327
++I G + GC EA+ +F QM SG
Sbjct: 338 VAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGS 397
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEI--------FYNMRRDYKVE-PNVKHYGCLVDLLC 378
P+ VT+I+VL+AC+ G +G EI + D+ E ++ Y L+D+
Sbjct: 398 LPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 457
Query: 379 RARLLDEAYEVIRNMPMEP-NAVLWGSLLTACASADD 414
+ R A + ++P+E N V W ++ A D
Sbjct: 458 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD 494
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 168/314 (53%), Gaps = 28/314 (8%)
Query: 117 QLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
+++ I NG PD F L+ A CG + V +++ +F V+ S ++
Sbjct: 286 EVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM----EFKDVV-SWNAMVAG 340
Query: 174 YCNFGDVKSAQLLFDQMTEKN----VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
Y G+ ++A LF M ++N VVTWTA+I G+ ++ E ++LFR+M SG N
Sbjct: 341 YSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPN 400
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCII-LNDKLGA---------ALTDMYAKCG 279
+T++SVLSACA+LGA G +H + KNC++ L++ G AL DMY+KC
Sbjct: 401 CVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR 460
Query: 280 YIEEALRVFKIVL--EKNVCTWNSIIGGLAIHGCGEEAVKMFWQM--QMSGIKPDDVTLI 335
+ A +F + E+NV TW +IGG A +G +A+K+F +M + G+ P+ T+
Sbjct: 461 SFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTIS 520
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG-CLVDLLCRARLLDEAYEVIRNMP 394
+L AC+H I GK+I + R ++ E + CL+D+ + +D A V +M
Sbjct: 521 CILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS 580
Query: 395 MEPNAVLWGSLLTA 408
+ +A+ W S++T
Sbjct: 581 -QKSAISWTSMMTG 593
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 131/311 (42%), Gaps = 30/311 (9%)
Query: 126 GLDPDSFTYPILLKACGDLRQVKGVHSLVV-------------------KSKDFNSVIHS 166
G+D + LLK C V +H ++ S+ F S
Sbjct: 32 GVDVYPSHFASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSL 91
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
T ++ Y G A L+ +++T V W +I H+KQ I++ +M +G
Sbjct: 92 GTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGT 151
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
+ TL VL AC L + G H + N N + AL MY++CG +EEA
Sbjct: 152 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 211
Query: 287 VFKIVLEK---NVCTWNSIIGGLAIHGCGEEAVKMFWQMQM------SGIKPDDVTLIAV 337
+F + ++ +V +WNSI+ A+ +F +M + + + D ++++ +
Sbjct: 212 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 271
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
L AC + + KE+ N R+ P+V L+D + L++ A +V M +
Sbjct: 272 LPACGSLKAVPQTKEVHGNAIRN-GTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK- 329
Query: 398 NAVLWGSLLTA 408
+ V W +++
Sbjct: 330 DVVSWNAMVAG 340
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 110/285 (38%), Gaps = 67/285 (23%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAK--LIESLVNSSQIAYAHLVFNQ 90
+L C HL KQ+HA +++ +R S LI+ + A VF+
Sbjct: 522 ILMACAHLAAIRIGKQIHAYVLR---HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDS 578
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGV 150
+ S ++ +++ GY G G + ++ +M G PD T+ ++L AC
Sbjct: 579 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS-------- 630
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
+C G V FD M+ +T + ++
Sbjct: 631 -----------------------HC--GMVDQGLSYFDSMSADYGLT--------PRAEH 657
Query: 211 YREGIDL----------FRKMRDSGVEVNELTLVSVLSACANLGASELGK-WVHEFVNKN 259
Y IDL +R ++D +E + V++LSAC EL + +++ V N
Sbjct: 658 YACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMN 717
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV-----CTW 299
ND ++++YA G ++ R+ ++ + + C+W
Sbjct: 718 A--ENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSW 760
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/555 (32%), Positives = 296/555 (53%), Gaps = 54/555 (9%)
Query: 11 LTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFK---------------------QV 49
LT +NS S T H PLLQ H K +V
Sbjct: 206 LTRHVFPSNSRTLSTFTTHIHLQQPLLQMALHGFNMKFENYNAILNECVNKRAFREGQRV 265
Query: 50 HAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEA 109
HA +IK + T+L L + AH VF+++ + ++ +I Y++
Sbjct: 266 HAHMIKTRYLPSVFLRTRLIVL---YTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQR 322
Query: 110 GLGHRGIQLYTQMIGNGL---------------------DPDSFTYPILLKAC-GDLRQV 147
G + + L+ + L +P+ FT+ +L +C L +
Sbjct: 323 GYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFI 382
Query: 148 KG--VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
G +HSL++K ++ + + L+ Y G + A+ +F+ + E++VV+ TA+I+G+
Sbjct: 383 LGRQIHSLIIK-LNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGY 441
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ E ++LFR+++ G++ N +T VL+A + L A +LGK VH V ++ I
Sbjct: 442 AQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFV 501
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QM 324
L +L DMY+KCG + + R+F + E+ V +WN+++ G + HG G E +K+F M +
Sbjct: 502 VLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREE 561
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR-DYKVEPNVKHYGCLVDLLCRARLL 383
+ +KPD VT++AVL+ CSH GL +KG IF +M +VEP ++HYGC+VDLL R+ +
Sbjct: 562 TKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRV 621
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
+EA+E I+ MP EP A +WGSLL AC +NV++ E A ++L+++EP N GNYV++S
Sbjct: 622 EEAFEFIKKMPFEPTAAIWGSLLGACRVH---SNVDIGEFAGQQLLEIEPGNAGNYVILS 678
Query: 444 NIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
N+YA+ +W+D +R LM ++ + K PG S IE++ V+H F D HP EEI ++
Sbjct: 679 NLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVK 738
Query: 504 YVAISLREECYAARM 518
++ S +E Y +
Sbjct: 739 ELSTSFKEVGYVPDL 753
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 217/350 (62%), Gaps = 3/350 (0%)
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
+T ++ G+ +A+ LFD M +++ V W AMI G+V RE + LF +MR +G
Sbjct: 271 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGA 330
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
V E+TLVS L+ACA LGA E GKWVH + + L+ LG AL DMY+KCG + A+
Sbjct: 331 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 390
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF + E+NV TW S + GLA++G G + + +F +M+ +G++P+ VT + VL CS AGL
Sbjct: 391 VFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGL 450
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+++G+ F +M+ ++ ++P ++HYGC+VDL RA LD+A I MP+EP+ +WG+LL
Sbjct: 451 VDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 510
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
A NVEL + AM++L+ +E ND +VL+SNIYA W +R +MK +
Sbjct: 511 NASRIHK---NVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKG 567
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
+ K PGCS IE+ VHEF VG HP +EI ML + LR + Y A
Sbjct: 568 VKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIA 617
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 8/245 (3%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
++ +L + A +F+ + A+N +I GY G ++L+ +M G
Sbjct: 274 MVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVG 333
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T L AC G L + K VHS S+ + T LI Y G V +A +F
Sbjct: 334 EVTLVSALTACAQLGALERGKWVHS-CAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVF 392
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
D M E+NV TWT+ ++G R+ + LF++M +GVE N +T V VL C+ G +
Sbjct: 393 DSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVD 452
Query: 248 LGKWVHEFVNKNCIILN--DKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIG 304
G+ + + N I + G + D+Y + G +++A+ + LE + W +++
Sbjct: 453 EGRACFDSMKSNHGIDPWLEHYG-CMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLN 511
Query: 305 GLAIH 309
IH
Sbjct: 512 ASRIH 516
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 4/156 (2%)
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
+S T LI+ +A A VF+ + + + + + + G A G+G + L+ +M
Sbjct: 367 LSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRM 426
Query: 123 IGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
G++P+ T+ ++L+ C G + + + + + + + ++ Y G
Sbjct: 427 ESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGR 486
Query: 180 VKSAQLLFDQMT-EKNVVTWTAMINGHVKQKNYREG 214
+ A + M E + W A++N KN G
Sbjct: 487 LDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELG 522
>gi|297820424|ref|XP_002878095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323933|gb|EFH54354.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 651
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 275/475 (57%), Gaps = 16/475 (3%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI-INP 94
+LQ C + + +++H+ +I + L + VN S ++YA L+F++ +P
Sbjct: 11 MLQGCNSMNKLRKIHSHVIINGLHHHPSIFNHLLRFCAVSVNGS-LSYAQLLFDRFDSDP 69
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD-PDSFTYPILLKACGDLRQVKG---V 150
ST A+N +IRG++ + I Y +M+ + + PD FT+ LKAC +R + +
Sbjct: 70 STSAWNYLIRGFSISSSPLYTILYYNRMLLSSVSRPDIFTFSFALKACERIRLIPKCLEL 129
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H V++S I S T L+ Y G V+ A +FD+M +++V+W AMI+
Sbjct: 130 HGSVIRSGFLADAIVS-TNLVRCYSANGSVEIASKVFDEMPVRDLVSWNAMISCFSHAGL 188
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK---L 267
+ + ++ +M + GV V+ T+V++LS+CA++ A +G +H C I + +
Sbjct: 189 HHQAFSMYSRMANEGVCVDAYTIVALLSSCAHVSALNMGVMLHRIA---CDIRCESSVFV 245
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
AL DMYAKCG +E A+ VFK + +++V TWNS+I G +HG G EA+ F +M SG+
Sbjct: 246 CNALIDMYAKCGSLENAVGVFKGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGV 305
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
+P+ VT + +L CSH GL+++G E F M + + PNVKHYGC+VDL RA L++A
Sbjct: 306 RPNAVTFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLFGRAGQLEKAL 365
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
E+I + VLW +LL +C N+EL E+AM++L++LE FN G+YVLM++IY+
Sbjct: 366 EMIHTSSCHEDPVLWRTLLGSCKIHR---NLELGEVAMKKLVQLEAFNAGDYVLMTSIYS 422
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
A MR+L++ ++ PG S IEI D VH+F++ D HP S IYS L
Sbjct: 423 AANDAQGFASMRKLIRSHDLRTIPGWSWIEIGDQVHKFVIDDKMHPESALIYSEL 477
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 243/423 (57%), Gaps = 21/423 (4%)
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVV 155
+ VI GY++ G H + L+ QMI +G P+ T +L AC G Q +H+ +
Sbjct: 376 WTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSL 435
Query: 156 KS------KDFNSVIHSL---TRLITFYCNFGDVKSAQLLFDQ--MTEKNVVTWTAMING 204
K+ DF L LI Y K+A+ +FD + E+NVVTWT MI G
Sbjct: 436 KNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG 495
Query: 205 HVKQKNYREGIDLFRKM--RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
H + + + + LF +M GV N T+ +L ACA+L A +GK +H +V ++
Sbjct: 496 HAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRY 555
Query: 263 LNDKLGAA--LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ A L DMY+KCG ++ A VF + +K+ +W S++ G +HG G EA+ +F
Sbjct: 556 ESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFD 615
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M+ +G PDD+T + VL ACSH G++++G F +M DY + P +HY C +DLL R+
Sbjct: 616 KMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARS 675
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
LD+A+ +++MPMEP AV+W +LL+AC +NVELAE A+ +L+++ NDG+Y
Sbjct: 676 GRLDKAWRTVKDMPMEPTAVVWVALLSACRVH---SNVELAEHALNKLVEMNAENDGSYT 732
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYS 500
L+SNIYA +W D ++R LMK+ I K PGCS ++ F VGD HP S +IY+
Sbjct: 733 LISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYA 792
Query: 501 MLE 503
+LE
Sbjct: 793 LLE 795
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 203/457 (44%), Gaps = 75/457 (16%)
Query: 32 HHLPLLQKCTHLVQFKQVHAQIIKASFDNRT----------------ISDTQLAK-LIES 74
H LL++C Q+H QII + + IS L ++ S
Sbjct: 46 HFASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVAS 105
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
+ YA LV ++ +N +IR + + G I + +M+ G PD FT
Sbjct: 106 YLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTL 165
Query: 135 PILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
P +LKACG+L R H L+ F S + L+ Y G ++ A ++FD++T
Sbjct: 166 PHVLKACGELPSYRCGSAFHGLIC-CNGFESNVFICNALVAMYSRCGSLEEASMIFDEIT 224
Query: 192 EK---NVVTWTAMINGHVKQKNYREGIDLFRKM------RDSGVEVNELTLVSVLSACAN 242
++ +V++W ++++ HVK N +DLF KM + + + +++V++L AC +
Sbjct: 225 QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 284
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN-- 300
L A K VH +N + +G AL D YAKCG +E A++VF ++ K+V +WN
Sbjct: 285 LKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 344
Query: 301 ---------------------------------SIIGGLAIHGCGEEAVKMFWQMQMSGI 327
++I G + GC EA+ +F QM SG
Sbjct: 345 VAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGS 404
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEI--------FYNMRRDYKVE-PNVKHYGCLVDLLC 378
P+ VT+I+VL+AC+ G +G EI + D+ E ++ Y L+D+
Sbjct: 405 LPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 464
Query: 379 RARLLDEAYEVIRNMPMEP-NAVLWGSLLTACASADD 414
+ R A + ++P+E N V W ++ A D
Sbjct: 465 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD 501
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 168/314 (53%), Gaps = 28/314 (8%)
Query: 117 QLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
+++ I NG PD F L+ A CG + V +++ +F V+ S ++
Sbjct: 293 EVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM----EFKDVV-SWNAMVAG 347
Query: 174 YCNFGDVKSAQLLFDQMTEKN----VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
Y G+ ++A LF M ++N VVTWTA+I G+ ++ E ++LFR+M SG N
Sbjct: 348 YSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPN 407
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCII-LNDKLGA---------ALTDMYAKCG 279
+T++SVLSACA+LGA G +H + KNC++ L++ G AL DMY+KC
Sbjct: 408 CVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR 467
Query: 280 YIEEALRVFKIVL--EKNVCTWNSIIGGLAIHGCGEEAVKMFWQM--QMSGIKPDDVTLI 335
+ A +F + E+NV TW +IGG A +G +A+K+F +M + G+ P+ T+
Sbjct: 468 SFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTIS 527
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG-CLVDLLCRARLLDEAYEVIRNMP 394
+L AC+H I GK+I + R ++ E + CL+D+ + +D A V +M
Sbjct: 528 CILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS 587
Query: 395 MEPNAVLWGSLLTA 408
+ +A+ W S++T
Sbjct: 588 -QKSAISWTSMMTG 600
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 132/314 (42%), Gaps = 32/314 (10%)
Query: 123 IGNGLDPDSFTYPILLKACGDLRQVKGVHSLVV-------------------KSKDFNSV 163
IG + P F LLK C V +H ++ S+ F S
Sbjct: 38 IGVDVYPSHFAS--LLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISP 95
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
T ++ Y G A L+ +++T V W +I H+KQ I++ +M
Sbjct: 96 RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 155
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
+G + TL VL AC L + G H + N N + AL MY++CG +EE
Sbjct: 156 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 215
Query: 284 ALRVFKIVLEK---NVCTWNSIIGGLAIHGCGEEAVKMFWQMQM------SGIKPDDVTL 334
A +F + ++ +V +WNSI+ A+ +F +M + + + D +++
Sbjct: 216 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 275
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+ +L AC + + KE+ N R+ P+V L+D + L++ A +V M
Sbjct: 276 VNILPACGSLKAVPQTKEVHGNAIRN-GTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 334
Query: 395 MEPNAVLWGSLLTA 408
+ + V W +++
Sbjct: 335 FK-DVVSWNAMVAG 347
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 110/285 (38%), Gaps = 67/285 (23%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAK--LIESLVNSSQIAYAHLVFNQ 90
+L C HL KQ+HA +++ +R S LI+ + A VF+
Sbjct: 529 ILMACAHLAAIRIGKQIHAYVLR---HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDS 585
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGV 150
+ S ++ +++ GY G G + ++ +M G PD T+ ++L AC
Sbjct: 586 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS-------- 637
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
+C G V FD M+ +T + ++
Sbjct: 638 -----------------------HC--GMVDQGLSYFDSMSADYGLT--------PRAEH 664
Query: 211 YREGIDL----------FRKMRDSGVEVNELTLVSVLSACANLGASELGK-WVHEFVNKN 259
Y IDL +R ++D +E + V++LSAC EL + +++ V N
Sbjct: 665 YACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMN 724
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV-----CTW 299
ND ++++YA G ++ R+ ++ + + C+W
Sbjct: 725 A--ENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSW 767
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 270/470 (57%), Gaps = 11/470 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP + K +L +Q+H I++ S ++ + LI++ ++ A +F+Q +
Sbjct: 343 LPSVSKFENLEYCRQIHCYIMRHSI---SLDIFLTSALIDAYFKCRGVSMAQKIFSQCNS 399
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GV 150
F +I GY GL ++++ ++ + P+ T +L G L +K +
Sbjct: 400 VDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGREL 459
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H ++K K F++ + +I Y G + A +F +++++++V+W +MI + N
Sbjct: 460 HGFIIK-KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDN 518
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
ID+FR+M SG+ + +++ + LSACANL + GK +H F+ K+ + L+ +
Sbjct: 519 PSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSEST 578
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIKP 329
L DMYAKCG ++ A+ VF + EKN+ +WNSII HG ++++ +F +M + SG +P
Sbjct: 579 LIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRP 638
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D +T + +++ C H G +++G F +M +DY ++P +HY C+VDL RA L EAYE
Sbjct: 639 DQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYET 698
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
+++MP P+A +WG+LL A + NVELA++A RL+ L+P+N G YVL+SN +A
Sbjct: 699 VKSMPFPPDAGVWGTLLGA---SRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANT 755
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
+W+ K+R LMKER + K PG S IEIN + H F+ GD HP S IY
Sbjct: 756 GEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFVSGDVNHPESSHIY 805
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 178/364 (48%), Gaps = 15/364 (4%)
Query: 36 LLQKCTHLV---QFKQVHAQIIKASFDNRTISDTQLAKLIE---SLVNSSQIAYAHLVFN 89
LLQ C++L Q KQVHA +I + +D ++ + S N ++ Y
Sbjct: 37 LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG 149
I P +N++I + GL ++ + Y +M+ G+ PD T+P L+KAC L+ KG
Sbjct: 97 SSIRP----WNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 152
Query: 150 VHSL--VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ L V S + + LI Y +G + A LFD++ +K+ V W M+NG+ K
Sbjct: 153 IEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAK 212
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
I F MR + N +T VLS CA+ +LG +H V + + +
Sbjct: 213 CGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSI 272
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
+L MY+KCG ++A+++F+++ + TWN +I G G EE++ F++M SG+
Sbjct: 273 KNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGV 332
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
PD +T ++L + S +E ++I Y MR + + ++ L+D + R + A
Sbjct: 333 LPDAITFSSLLPSVSKFENLEYCRQIHCYIMR--HSISLDIFLTSALIDAYFKCRGVSMA 390
Query: 387 YEVI 390
++
Sbjct: 391 QKIF 394
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 190/385 (49%), Gaps = 12/385 (3%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L++ C L FK + S ++ + LI++ + +I A +F++++
Sbjct: 140 LVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKD 199
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK-GV--HS 152
+N ++ GYA+ G I+ ++ M + + P++ T+ +L C + GV H
Sbjct: 200 CVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 259
Query: 153 LVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
LVV S DF I + L++ Y G A LF M+ + VTW MI+G+V+
Sbjct: 260 LVVVSGLDFEGSIKN--SLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLM 317
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
E + F +M SGV + +T S+L + + E + +H ++ ++ I L+ L +AL
Sbjct: 318 EESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSAL 377
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
D Y KC + A ++F +V + ++I G +G +A++MF + I P++
Sbjct: 378 IDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNE 437
Query: 332 VTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGC-LVDLLCRARLLDEAYEV 389
+TL+++L ++ G+E+ + +++ + N+ GC ++D+ + ++ AYE+
Sbjct: 438 ITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNI---GCAVIDMYAKCGRMNLAYEI 494
Query: 390 IRNMPMEPNAVLWGSLLTACASADD 414
+ + + V W S++T CA +D+
Sbjct: 495 FGRLS-KRDIVSWNSMITRCAQSDN 518
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 188/473 (39%), Positives = 270/473 (57%), Gaps = 14/473 (2%)
Query: 50 HAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
HAQII+ TI+ L + LV S A +F+++ S ++NT++ +
Sbjct: 70 HAQIIRVGLRADTITSNMLMNMYSKCGLVES-----ARKLFDEMPVRSLVSWNTMVGSHT 124
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVI 164
+ G + + L+ QM G FT ++ AC + + K +H +K+ +S +
Sbjct: 125 QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTA-LDSNV 183
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
T L+ Y G VK A L+F+ M E++ VTW++M+ G+V+ + Y E + LF + +
Sbjct: 184 FVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAM 243
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
G+E N+ T+ S LSACA A GK V K I N + ++L DMYAKCG IEEA
Sbjct: 244 GLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEA 303
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
VF V EKNV WN+I+ G + H EA+ F +MQ GI P+D+T I+VL+ACSH
Sbjct: 304 YTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHL 363
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
GL+EKG++ F M R + V PNV HY C+VD+L RA LL EA + I MP + A +WGS
Sbjct: 364 GLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGS 423
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL +C N+ELAE+A + L ++EP N GN+VL+SNIYAA +W++ + R L+KE
Sbjct: 424 LLASCRIYR---NLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKE 480
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
K G S IEI VH FMVG+ HP EIY LE + +++ Y A+
Sbjct: 481 SKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAK 533
>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 607
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/470 (35%), Positives = 269/470 (57%), Gaps = 12/470 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K VH I + + +T + L L + A +F+++ +N +I Y
Sbjct: 131 KIVHCIAIVSKLSGDLLVNTAVLSLYSKL---RSLVDARKLFDKMPEKDRVVWNIMIAAY 187
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSV 163
A G ++L+ M +G+ D FT ++ + L+ V K H+ ++++ +S
Sbjct: 188 AREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGS-DSQ 246
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ LI YC + SA +F+ MT+K+V++W+AMI G+VK + LF KM+
Sbjct: 247 VSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKS 306
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
G++ + + ++++L A ++GA E K++H + K + L AL YAKCG IE
Sbjct: 307 DGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEM 366
Query: 284 ALRVFK--IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
A R+F+ + +K++ WNS+I A HG + K++ +M+ S KPD VT + +LTAC
Sbjct: 367 AQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTAC 426
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
++GL+EKGKE F M Y +P+ +HY C+V+LL RA L+ EA E+++NMP++P+A +
Sbjct: 427 VNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARV 486
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
WG LL+AC +LAE A E+LI +EP N GNY+L+SNIYAA +WD KMR
Sbjct: 487 WGPLLSACKMH---PGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSF 543
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLRE 511
++ + + K PGCS +EIN V EF V D HP + +IY++L + + ++E
Sbjct: 544 LRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKE 593
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 192/391 (49%), Gaps = 22/391 (5%)
Query: 36 LLQKCTHL--VQF-KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L+ C+ V F + +H ++K FD + T LA++ E + + AH +F++
Sbjct: 16 VLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECI---EFENAHQLFDKRS 72
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
+++ + G +++ +MI L PDSFT+ LL+ L + K
Sbjct: 73 VKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKI 132
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
VH + + SK ++ + T +++ Y + A+ LFD+M EK+ V W MI + ++
Sbjct: 133 VHCIAIVSKLSGDLLVN-TAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREG 191
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E ++LF+ M SG+ + T + V+S+ A L + GK H + +N +
Sbjct: 192 KPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHN 251
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
+L DMY +C ++ A ++F + +K+V +W+++I G +G A+ +F +M+ GI+
Sbjct: 252 SLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQA 311
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRA-----RLL 383
D V +I +L A H G +E K + Y+M+ P++ + C + RL
Sbjct: 312 DFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLF 371
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
+E E I + + ++W S+++A A+ D
Sbjct: 372 EE--EKID----DKDLIMWNSMISAHANHGD 396
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 141/296 (47%), Gaps = 22/296 (7%)
Query: 122 MIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVK-SKDFNSVIHSLTRLITFYCNF 177
M+ + PD TYP +L++C V + +H +VK D V+ T L Y
Sbjct: 1 MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVA--TALAEMYEEC 58
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI-DLFRKMRDSGVEVNELTLVSV 236
+ ++A LFD+ + K+ + W + + Q + EGI +F +M + + T ++
Sbjct: 59 IEFENAHQLFDKRSVKD-LGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNL 117
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGA------ALTDMYAKCGYIEEALRVFKI 290
L A L + +L K VH CI + KL A+ +Y+K + +A ++F
Sbjct: 118 LRFIAGLNSIQLAKIVH------CIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDK 171
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+ EK+ WN +I A G E +++F M SGI+ D T + V+++ + ++ G
Sbjct: 172 MPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWG 231
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
K+ ++ R+ + V + L+D+ C ++LD A ++ N + + + W +++
Sbjct: 232 KQTHAHILRN-GSDSQVSVHNSLIDMYCECKILDSACKIF-NWMTDKSVISWSAMI 285
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 4/195 (2%)
Query: 229 NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
+E T VL +C++ G+ +H ++ K L D + AL +MY +C E A ++F
Sbjct: 9 DEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLF 68
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
K++ +S+ + GE ++F +M + PD T +L + I+
Sbjct: 69 DKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQ 128
Query: 349 KGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
K I + + K+ ++ ++ L + R L +A ++ MP E + V+W ++ A
Sbjct: 129 LAK-IVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMP-EKDRVVWNIMIAA 186
Query: 409 CASADDGANVELAEI 423
A +G E E+
Sbjct: 187 YAR--EGKPTECLEL 199
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/493 (35%), Positives = 268/493 (54%), Gaps = 33/493 (6%)
Query: 52 QIIKASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAG 110
Q + FD+RT D L+ V SQI A +FN++ ++NT++ GYA G
Sbjct: 248 QEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRG 307
Query: 111 -----------LGHRGIQLYTQMIG----NGL------------DPDSFTYPILLKACGD 143
R + +T ++ NG+ D ++ ++ ++ A
Sbjct: 308 DMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQ 367
Query: 144 LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
R ++ L N + S ++T Y G + A+ +F M +K+ V+W AM+
Sbjct: 368 RRMMEEAKELFDAMPCRN--VASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLA 425
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
+ + E + LF++M G VN VLS CA++ A E G +H + K +
Sbjct: 426 AYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGV 485
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+G AL MY KCG +EEA F+ + E++V +WN++I G A HG G+EA+++F M+
Sbjct: 486 GCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMR 545
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
+ KPDD+TL+ VL ACSH+GL+EKG FY+M RD+ V +HY C++DLL RA L
Sbjct: 546 KTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRL 605
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
DEA ++++MP EP++ +WG+LL A + N EL A E++ +LEP N G YVL+S
Sbjct: 606 DEAVNLMKDMPFEPDSTMWGALLGA---SRIHRNSELGRNAAEKIFELEPENAGMYVLLS 662
Query: 444 NIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
NIYA+ +W D KMR +M ER + K PG S IE+ + VH F VGD HP E+IY+ LE
Sbjct: 663 NIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLE 722
Query: 504 YVAISLREECYAA 516
+ I +++ Y +
Sbjct: 723 DLDIRMKKAGYVS 735
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 156/370 (42%), Gaps = 86/370 (23%)
Query: 70 KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP 129
+ I + + + ++ A +F + ST +NT++ GYA G + + + + P
Sbjct: 112 RAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP----RP 167
Query: 130 DSFTYPILLKACGDLRQVKGVHSL-----VVKSKDFNSVI-----HSLTRLITFYCNF-- 177
DSF+Y LL A G + V +L V S +N +I H L L Y +
Sbjct: 168 DSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAP 227
Query: 178 -----------------GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
G ++ A+ LFD TE + ++W A++ G+V++ E +F K
Sbjct: 228 EKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNK 287
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M V V+ T+VS YA+ G
Sbjct: 288 MPQRDV-VSWNTMVSG--------------------------------------YARRGD 308
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD--VTLIAVL 338
+ EA R+F + ++V TW +I+ G A +G EEA ++F M PD V+ A++
Sbjct: 309 MAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAM------PDKNAVSWNAMM 362
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
A ++E+ KE+F D NV + ++ +A +LDEA + MP + +
Sbjct: 363 AAYVQRRMMEEAKELF-----DAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMP-QKD 416
Query: 399 AVLWGSLLTA 408
AV W ++L A
Sbjct: 417 AVSWAAMLAA 426
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 268/471 (56%), Gaps = 20/471 (4%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K +H Q IK FD + LA + + Y +F ++ P ++ T+I Y
Sbjct: 278 KAIHTQTIKQGFDESSFVINTLATMYN---KCGKADYVMRLFEKMKMPDVVSWTTLITTY 334
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL------RQVKGVHSLVVKSKDF 160
+ G ++ + +M + + P+ +T+ ++ AC +L Q+ G H L + D
Sbjct: 335 VQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHG-HVLRLGLVDA 393
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
SV +S+ +T Y G +KSA L+F +T K++++W+ +I + + +E D
Sbjct: 394 LSVANSI---VTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSW 450
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK--LGAALTDMYAKC 278
MR G + NE L SVLS C ++ E GK VH V CI ++ + + +AL MY+KC
Sbjct: 451 MRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVL--CIGIDHEAMVHSALISMYSKC 508
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G +EEA ++F + N+ +W ++I G A HG +EA+ +F ++ G+KPD VT I VL
Sbjct: 509 GSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVL 568
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
TACSHAG+++ G F M +Y++ P+ +HYGC++DLLCRA L EA +IR+MP +
Sbjct: 569 TACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTD 628
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
V+W +LL +C D V+ E+L++L+P + G ++ ++NIYAAK +W +A +
Sbjct: 629 DVVWSTLLRSCRVHGD---VDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHI 685
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
R+LMK + ++K G S + +ND ++ F+ GD HP SE I ++LE ++ ++
Sbjct: 686 RKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELLSANI 736
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 156/343 (45%), Gaps = 35/343 (10%)
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL 127
+A L+ + N + Y ++ + + F ++ A++ L H G ++TQ I G
Sbjct: 230 IAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGF 289
Query: 128 DPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
D SF + L T Y G LF
Sbjct: 290 DESSFV---------------------------------INTLATMYNKCGKADYVMRLF 316
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
++M +VV+WT +I +V++ ++ F++MR S V N+ T +V+SACANL ++
Sbjct: 317 EKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAK 376
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
G+ +H V + ++ + ++ +Y+K G ++ A VF + K++ +W++II +
Sbjct: 377 WGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYS 436
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
G +EA M+ G KP++ L +VL+ C L+E+GK++ ++ ++
Sbjct: 437 QGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHV-LCIGIDHEA 495
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ L+ + + ++EA ++ M + N + W +++ A
Sbjct: 496 MVHSALISMYSKCGSVEEASKIFNGMKIN-NIISWTAMINGYA 537
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 139/292 (47%), Gaps = 9/292 (3%)
Query: 120 TQMIGNGLD-PDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG 178
T + LD P +++ P C +L Q L + ++++ L + G
Sbjct: 46 TAVFSRNLDSPLTYSSPGTATECRELIQQAKQEQLAQNAYSVHNMLE-LNSELKQLVKQG 104
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR-DSGVEVNELTLVSVL 237
+ ++ +FD+MT ++ ++WT +I G+V + E + LF M G++ ++ + L
Sbjct: 105 QLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVAL 164
Query: 238 SACANLGASE-LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
AC LG + G+ +H F K+ +I + + +AL DMY K G IE+ RVFK + ++NV
Sbjct: 165 KACG-LGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNV 223
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-Y 355
+W +II GL G EA+ F +M +S + D T L A + + L+ GK I
Sbjct: 224 VSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQ 283
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
+++ + V L + + D + M M P+ V W +L+T
Sbjct: 284 TIKQGFDESSFV--INTLATMYNKCGKADYVMRLFEKMKM-PDVVSWTTLIT 332
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
L Q KQVHA ++ D+ + + LI + A +FN + + ++ +
Sbjct: 476 LEQGKQVHAHVLCIGIDHEAMVHS---ALISMYSKCGSVEEASKIFNGMKINNIISWTAM 532
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
I GYAE G I L+ ++ GL PD T+ +L AC
Sbjct: 533 INGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTAC 571
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 171/478 (35%), Positives = 266/478 (55%), Gaps = 16/478 (3%)
Query: 49 VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE 108
VH +++ + FD T+L + L I A VF++ + + +N + R A
Sbjct: 100 VHRRLVSSGFDQDPFLATKLINMYYEL---GSIDRARKVFDETRERTIYVWNALFRALAM 156
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-------GDLRQVKGVHSLVVKSKDFN 161
G G + LY QM G+ D FTY +LKAC L++ K +H+ +++ +
Sbjct: 157 VGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILR-HGYE 215
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
+ IH +T L+ Y FG V A +F M KN V+W+AMI K + + ++LF+ M
Sbjct: 216 ANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLM 275
Query: 222 RDSGVEV--NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
+ N +T+V+VL ACA L A E GK +H ++ + + + AL MY +CG
Sbjct: 276 MLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCG 335
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
I RVF + ++V +WNS+I +HG G++A+++F M G P ++ I VL
Sbjct: 336 EILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLG 395
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSHAGL+E+GK +F +M Y++ P ++HY C+VDLL RA LDEA ++I +M EP
Sbjct: 396 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGP 455
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
+WGSLL +C NVELAE A L +LEP N GNYVL+++IYA W +A +
Sbjct: 456 TVWGSLLGSCRIH---CNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVM 512
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
+L++ R + K PGCS IE+ V+ F+ D +P EEI+++L ++ ++ + Y +
Sbjct: 513 KLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQ 570
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 172/427 (40%), Gaps = 71/427 (16%)
Query: 70 KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP 129
+LI+SL + A + NP+ F +I A+ G+ ++ +++ +G D
Sbjct: 52 QLIQSLCKGGNLKQAIHLLCCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQ 111
Query: 130 DSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQ 189
D F T+LI Y G + A+ +FD+
Sbjct: 112 DPFL---------------------------------ATKLINMYYELGSIDRARKVFDE 138
Query: 190 MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC--ANLGASE 247
E+ + W A+ +E +DL+ +M G+ + T VL AC + L S
Sbjct: 139 TRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSP 198
Query: 248 L--GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
L GK +H + ++ N + L D+YAK G + A VF + KN +W+++I
Sbjct: 199 LQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIAC 258
Query: 306 LAIHGCGEEAVKMFWQMQMSGIK--PDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYK 362
A + +A+++F M + P+ VT++ VL AC+ +E+GK I Y +RR
Sbjct: 259 FAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLD 318
Query: 363 -----VEPNVKHYGCLVDLLCRARLLD------------------------EAYEVIRNM 393
+ + YG ++L R+ D +A ++ NM
Sbjct: 319 SILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENM 378
Query: 394 PMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDG--NYVLMSNIYAAKAQ 451
+ ++ + S +T + VE +I E ++ + G +Y M ++ +
Sbjct: 379 IHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANR 438
Query: 452 WDDAGKM 458
D+A K+
Sbjct: 439 LDEAIKL 445
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 277/488 (56%), Gaps = 13/488 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP + + L Q K +HA I+ F + + T L++ + YA +FN +
Sbjct: 217 LPTIGQANALHQGKAIHAYYIRNFFFDNVVLQT---ALLDMYAKCHLLFYARKIFNTVNK 273
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKACG---DLRQVKG 149
+ ++ +I GY + LY M+ GL+P T +L+AC DL++ K
Sbjct: 274 KNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKK 333
Query: 150 VHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
+H ++KS D ++ + + LI+ Y G + +A D+M K+ V+++A+I+G V+
Sbjct: 334 LHCHMIKSGMDLDTTVGN--SLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQN 391
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ + +FR+M+ SG+ T++++L AC++L A + G H + + +
Sbjct: 392 GYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSIC 451
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
A+ DMY+KCG I + +F + +++ +WN++I G IHG EA+ +F ++Q G+K
Sbjct: 452 NAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLK 511
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PDDVTLIAVL+ACSH+GL+ +GK F +M +++ ++P + HY C+VDLL RA LDEAY
Sbjct: 512 PDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYT 571
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
I+ MP PN +WG+LL AC + N+E+ E +++ L P GN+VLMSNIY++
Sbjct: 572 FIQRMPFVPNVRIWGALLAACRTHK---NIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSS 628
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAIS 508
+WDDA +R + + K+PGCS +EI+ V+H F+ G HP S I L+ + +
Sbjct: 629 VGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQ 688
Query: 509 LREECYAA 516
+++ Y A
Sbjct: 689 MKKLGYRA 696
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 189/379 (49%), Gaps = 17/379 (4%)
Query: 43 LVQFKQVHAQIIKASFDNR----TISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFA 98
L+ ++Q H QI S + SD +L ++ ++I A VF+QI PS
Sbjct: 15 LINWRQRHRQIRSFSPHPHPHRVSDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVL 74
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK-----GVHSL 153
+N +IR YA +G + I LY M+ G+ P +FT+P LLKAC L+ ++ H+
Sbjct: 75 WNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAH 134
Query: 154 VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT--EKNVVTWTAMINGHVKQKNY 211
++ + ++ T L+ Y G + AQ LF+ ++ ++++V W AMI +
Sbjct: 135 IL---GLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALH 191
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
+ I +M+ +GV N TLVS+L A GK +H + +N N L AL
Sbjct: 192 AQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTAL 251
Query: 272 TDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ-MSGIKPD 330
DMYAKC + A ++F V +KN W+++IGG +H +A+ ++ M + G+ P
Sbjct: 252 LDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPT 311
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
TL +L AC+ +++GK++ +M + ++ + L+ + + ++D A +
Sbjct: 312 PATLATMLRACAQLTDLKRGKKLHCHMIKS-GMDLDTTVGNSLISMYAKCGIMDNAVGFL 370
Query: 391 RNMPMEPNAVLWGSLLTAC 409
M + + V + ++++ C
Sbjct: 371 DEM-IAKDTVSYSAIISGC 388
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/522 (32%), Positives = 284/522 (54%), Gaps = 51/522 (9%)
Query: 37 LQKCTHLVQFK---QVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQII 92
L C L K Q+H+ + ++++ +SD + + L++ ++ YA VF+++
Sbjct: 158 LSACAGLQDLKLGSQIHSLVYRSNY----LSDVYMGSALVDMYSKCGRVEYAQSVFDEMT 213
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---G 149
S ++N++I Y + G ++++ +MI G++PD T ++ AC + +K
Sbjct: 214 VRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQ 273
Query: 150 VHSLVVKSKDFNS-------------------------------VIHSLTRLITFYCNFG 178
+H+ VVK +F + + S T +++ Y
Sbjct: 274 IHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKAS 333
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
VK A+ +F M K+V+TW A+I G + E + LFR ++ V T ++L+
Sbjct: 334 KVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLN 393
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDK------LGAALTDMYAKCGYIEEALRVFKIVL 292
ACANL +LG+ H V K+ +G +L DMY KCG +E RVF+ +L
Sbjct: 394 ACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHML 453
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
EK+ +WN++I G A +G G +A+++F +M SG PD VT+I VL ACSHAGL+++G+
Sbjct: 454 EKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRY 513
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
F +M + + P HY C+VDLL RA L+EA +I M M+P+A++WGSLL AC
Sbjct: 514 YFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVH 573
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
N++L E +++L++++P N G YVL+SN+YA W + ++R+LM++R +VK PG
Sbjct: 574 ---RNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPG 630
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
CS IEI ++ FMV D RH +EIY +L + +++ Y
Sbjct: 631 CSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGY 672
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 202/431 (46%), Gaps = 70/431 (16%)
Query: 48 QVHAQIIKASFDNRTISDTQL-------------AKLIESLVNSSQIAYAHLV------- 87
+VHA IIK+ F + T +L KL + ++ + ++ ++
Sbjct: 40 RVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSG 99
Query: 88 --------FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK 139
F ++ ++N++I G+ + G + + QM G+G + +++ L
Sbjct: 100 FLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALS 159
Query: 140 ACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVV 196
AC L+ +K +HSLV +S ++ S ++ + L+ Y G V+ AQ +FD+MT ++ V
Sbjct: 160 ACAGLQDLKLGSQIHSLVYRS-NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRV 218
Query: 197 TWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV 256
+W ++I + + E + +F +M GVE +E+TL SV+SACA + A + G+ +H V
Sbjct: 219 SWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARV 278
Query: 257 NKNCIILNDK-LGAALTDMYAKCGYIEEALRVFKI------------------------- 290
K ND LG AL DMYAKC I EA +F +
Sbjct: 279 VKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVA 338
Query: 291 ------VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
++ K+V TWN++I G +G EEA+ +F ++ + P T +L AC++
Sbjct: 339 RYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANL 398
Query: 345 GLIEKGKE-----IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
++ G++ + + R Y + +V L+D+ + ++ V ++M +E +
Sbjct: 399 ADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHM-LEKDC 457
Query: 400 VLWGSLLTACA 410
V W +++ A
Sbjct: 458 VSWNAMIVGYA 468
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
+L+ CA ++ VH + K+ + L D+Y KCG ++ A ++F +LE+N
Sbjct: 25 LLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERN 84
Query: 296 VCTWNSI-------------------------------IGGLAIHGCGEEAVKMFWQMQM 324
+ +WNSI I G HG +EA+ F QM
Sbjct: 85 IFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHG 144
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
G ++ + + L+AC+ ++ G +I + R + +V LVD+ + ++
Sbjct: 145 HGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYL-SDVYMGSALVDMYSKCGRVE 203
Query: 385 EAYEVIRNMPMEPNAVLWGSLLT 407
A V M + V W SL+T
Sbjct: 204 YAQSVFDEMTVRSR-VSWNSLIT 225
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/489 (34%), Positives = 283/489 (57%), Gaps = 14/489 (2%)
Query: 36 LLQKCTHL--VQF-KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+LQ C HL ++F K VH +I + ++ T + L I + + VF+ +
Sbjct: 322 ILQACGHLGDLEFGKYVHDYMITSGYECDTTASNIL---INMYAKCGNLLASQEVFSGMK 378
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKG 149
+ ++N++I Y + G ++L+ +M+ + PDS TY +LL GDL K
Sbjct: 379 CKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKE 437
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H + K FNS I L+ Y G++ + +F+ M ++++TW +I V +
Sbjct: 438 LHCDLAK-MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSE 496
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ G+ + +MR GV + T++S+L C+ L A GK +H + K + + +G
Sbjct: 497 DCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGN 556
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
L +MY+KCG + + +VFK++ K+V TW ++I ++G G++AV+ F +M+ +GI P
Sbjct: 557 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVP 616
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D V +A++ ACSH+GL+E+G F+ M++DYK+EP ++HY C+VDLL R+ LLD+A +
Sbjct: 617 DHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF 676
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I +MP++P++ +WG+LL+AC + D E+AE ER+I+L P + G YVL+SNIYAA
Sbjct: 677 ILSMPLKPDSSIWGALLSACRMSGD---TEIAERVSERIIELNPDDTGYYVLVSNIYAAL 733
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+WD +R+ +K R + K+PGCS +EI + V+ F G EE+ +L +A +
Sbjct: 734 GKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLM 793
Query: 510 REECYAARM 518
+E Y A +
Sbjct: 794 AKEGYIANL 802
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 190/368 (51%), Gaps = 15/368 (4%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS--TFAFNTV 102
Q ++H+ II + I AKLI + + VF ++ +PS + +N++
Sbjct: 31 QLHKLHSLIITLGLHHSVIFS---AKLIAKYAHFRDPTSSFSVF-RLASPSNNVYLWNSI 86
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKD 159
IR GL + LY++ L PD++T+P ++ AC D K +H V+
Sbjct: 87 IRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVL-DMG 145
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
F S ++ LI YC F D+ A+ +F++M ++VV+W ++I+G+ + E ++++
Sbjct: 146 FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYY 205
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
+ R+ GV + T+ SVL AC LG+ E G +H + K I + + L MY K
Sbjct: 206 RFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFN 265
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
+ + R+F ++ ++ +WN++I G + G EE++K+F +M ++ KPD +T+ ++L
Sbjct: 266 GLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQ 324
Query: 340 ACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
AC H G +E GK + Y + Y+ + + L+++ + L + EV M + +
Sbjct: 325 ACGHLGDLEFGKYVHDYMITSGYECDTTASN--ILINMYAKCGNLLASQEVFSGMKCK-D 381
Query: 399 AVLWGSLL 406
+V W S++
Sbjct: 382 SVSWNSMI 389
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/432 (37%), Positives = 257/432 (59%), Gaps = 9/432 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A LVF+ + S ++NT+I GY +G + ++L+++M G FT + AC
Sbjct: 111 ARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAA 170
Query: 144 ---LRQVKGVHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
+ + K +H++ +K + D NS + T ++ Y +K A +F++M E+ +VTW+
Sbjct: 171 KYAINECKQLHTIALKLALDSNSFVG--TAILDVYAKCNMIKDACWVFEKMPERTLVTWS 228
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
++ G+V+ + E + LFR + GVE+ E TL ++LSACA+L G +H + K
Sbjct: 229 SLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKC 288
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
N + A+L D+YA+CG IE+A +F + KNV WN++I + H EA+ +F
Sbjct: 289 GFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILF 348
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
+MQ GI P++VT ++VL+ CSHAGL+EKG+ F + D VEPNV HY C+VD+L R
Sbjct: 349 EKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGR 408
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
+ DEA+E++ MP EP A +WGSLL +C + + N+ LA IA E+L +LEP N GN+
Sbjct: 409 SGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYN---NIRLARIAAEQLFQLEPDNGGNH 465
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
VL+SN+YAA W++ R+ +K+ K G S IE VH F+VG+ +HP +IY
Sbjct: 466 VLLSNVYAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIY 525
Query: 500 SMLEYVAISLRE 511
+ LE + +R+
Sbjct: 526 NKLEEIYHEMRK 537
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 11/296 (3%)
Query: 148 KGVHSLVVKSKDFNSVIHSLT--RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
K H L + F V +LT LI Y G A+L+FD M +++V+W MI G+
Sbjct: 77 KSCHGLAIH---FGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGY 133
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ + LF +M G ++E TL S + ACA A K +H K + N
Sbjct: 134 THSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNS 193
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
+G A+ D+YAKC I++A VF+ + E+ + TW+S+ G +G EEA+ +F Q
Sbjct: 194 FVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQRE 253
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G++ + TL A+L+AC+ L +G ++ + + N LVD+ R +++
Sbjct: 254 GVELTEFTLSAILSACASLALKIEGIQL-HAVILKCGFHGNFFVAASLVDVYARCGQIEK 312
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF-NDGNYV 440
AY + M N V+W +++ AS A+ A I E++ +L F N+ Y+
Sbjct: 313 AYALFAYME-HKNVVIWNAMI---ASFSRHAHSWEAMILFEKMQQLGIFPNEVTYL 364
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 9/263 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQ+H +K + D+ + T + ++ + I A VF ++ + ++++ GY
Sbjct: 178 KQLHTIALKLALDSNSFVGTAI---LDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGY 234
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR-QVKGV--HSLVVKSKDFNSV 163
+ GL + L+ G++ FT +L AC L +++G+ H++++K F+
Sbjct: 235 VQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKC-GFHGN 293
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
L+ Y G ++ A LF M KNVV W AMI + + E + LF KM+
Sbjct: 294 FFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQ 353
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG-AALTDMYAKCGYIE 282
G+ NE+T +SVLS C++ G E G+ + + + + L + + D+ + G +
Sbjct: 354 LGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTD 413
Query: 283 EALRVF-KIVLEKNVCTWNSIIG 304
EA + K+ E W S++G
Sbjct: 414 EAWELLNKMPFEPTASMWGSLLG 436
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 282/473 (59%), Gaps = 12/473 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
++VHA +IK + T +LI V + A VF+ + + ++ +I Y
Sbjct: 78 QRVHAHMIKTHYLPCVYLRT---RLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAY 134
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-GDLRQVKG--VHSLVVKSKDFNSV 163
++ G + + L+ QM+ +G +P+ FT+ +L +C G V G +HS ++K ++ +
Sbjct: 135 SQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIK-LNYEAH 193
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
++ + L+ Y G + A+ +F + E++VV+ TA+I+G+ + E ++LFR+++
Sbjct: 194 VYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQR 253
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
G++ N +T SVL+A + L A + GK VH + ++ + L +L DMY+KCG +
Sbjct: 254 EGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTY 313
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIKPDDVTLIAVLTACS 342
A R+F + E+ V +WN+++ G + HG G E +++F M + +KPD VT++AVL+ CS
Sbjct: 314 ARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCS 373
Query: 343 HAGLIEKGKEIFYNMRR-DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
H GL +KG +IFY+M V+P+ KHYGC+VD+L RA ++ A+E ++ MP EP+A +
Sbjct: 374 HGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAI 433
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
WG LL AC+ +N+++ E +L+++EP N GNYV++SN+YA+ +W+D +R L
Sbjct: 434 WGCLLGACSVH---SNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNL 490
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
M ++ + K PG S IE++ V+H F D HP EE+ + ++ ++ +E Y
Sbjct: 491 MLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGY 543
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 160/301 (53%), Gaps = 6/301 (1%)
Query: 121 QMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNF 177
M GLD + Y +L C +R+ + VH+ ++K+ + ++ TRLI FY
Sbjct: 48 HMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTH-YLPCVYLRTRLIVFYVKC 106
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
++ A+ +FD M E+NVV+WTAMI+ + ++ + + LF +M SG E NE T +VL
Sbjct: 107 DSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVL 166
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
++C LG+ +H + K + +G++L DMYAK G I EA +F+ + E++V
Sbjct: 167 TSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVV 226
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
+ +II G A G EEA+++F ++Q G++ + VT +VLTA S ++ GK++ ++
Sbjct: 227 SCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHL 286
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
R +V V L+D+ + L A + + E + W ++L + +G
Sbjct: 287 LRS-EVPSYVVLQNSLIDMYSKCGNLTYARRIFDTL-HERTVISWNAMLVGYSKHGEGRE 344
Query: 418 V 418
V
Sbjct: 345 V 345
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 217/350 (62%), Gaps = 3/350 (0%)
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
+T ++ G+ +A+ LFD M +++ V W AMI G+V RE + LF +MR +G
Sbjct: 264 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGA 323
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
V E+TLVS L+ACA LGA E GKWVH + + L+ LG AL DMY+KCG + A+
Sbjct: 324 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 383
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF + E+NV TW S + GLA++G G + + +F +M+ +G++P+ VT + VL CS AGL
Sbjct: 384 VFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGL 443
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+++G+ F +M+ ++ ++P ++HYGC+VDL RA LD+A I MP+EP+ +WG+LL
Sbjct: 444 VDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 503
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
A NVEL + AM++L+ +E ND +VL+SNIYA W +R +MK +
Sbjct: 504 NASRIHK---NVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKG 560
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
+ K PGCS IE+ VHEF VG HP +EI ML + LR + Y A
Sbjct: 561 VKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIA 610
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 8/245 (3%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
++ +L + A +F+ + A+N +I GY G ++L+ +M G
Sbjct: 267 MVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVG 326
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T L AC G L + K VHS S+ + T LI Y G V +A +F
Sbjct: 327 EVTLVSALTACAQLGALERGKWVHS-CAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVF 385
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
D M E+NV TWT+ ++G R+ + LF++M +GVE N +T V VL C+ G +
Sbjct: 386 DSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVD 445
Query: 248 LGKWVHEFVNKNCIILN--DKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIG 304
G+ + + N I + G + D+Y + G +++A+ + LE + W +++
Sbjct: 446 EGRACFDSMKSNHGIDPWLEHYG-CMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLN 504
Query: 305 GLAIH 309
IH
Sbjct: 505 ASRIH 509
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 4/156 (2%)
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
+S T LI+ +A A VF+ + + + + + + G A G+G + L+ +M
Sbjct: 360 LSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRM 419
Query: 123 IGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
G++P+ T+ ++L+ C G + + + + + + + ++ Y G
Sbjct: 420 ESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGR 479
Query: 180 VKSAQLLFDQMT-EKNVVTWTAMINGHVKQKNYREG 214
+ A + M E + W A++N KN G
Sbjct: 480 LDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELG 515
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 279/477 (58%), Gaps = 20/477 (4%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L CT L F+ Q+H+ ++ ++ + L + N + A VFN++
Sbjct: 261 MLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMP 320
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQ-LYTQMIGNGLDPDSFTYPILLKAC---GDLRQVK 148
+ A+ ++ GY + G + L+ +M+ G+ P+ TY +LKAC GD +
Sbjct: 321 KHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGR 380
Query: 149 GVHSLVVKSK--DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+H+ VKS D N V ++L ++ Y G ++ A+ FDQ+ EKN+V+++ ++G
Sbjct: 381 QIHTHCVKSNLADLNVVGNAL---VSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDG 437
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ Y++ ++ + ++ T S++SA A++G G+ +H K +
Sbjct: 438 RSNTYQD-----YQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRA 492
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+G +L MY++CGY+ +A +VF + + NV +W S+I GLA HG A+++F M +G
Sbjct: 493 IGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAG 552
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
+KP+DVT IAVL+ACSHAGL+++GKE F M++ + + P ++HY C+VDLL R+ L+++A
Sbjct: 553 VKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDA 612
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
+ I MP + +A++W +LL AC + + N+++ EIA +I+LEP + YVL+SN+Y
Sbjct: 613 LDFINEMPCQVDALVWKTLLGACKTHN---NMDIGEIAANHVIQLEPQDPAPYVLLSNLY 669
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
A WD ++R LM+++N++K G S + +++ +HEF GD HP +EEIY+ LE
Sbjct: 670 AEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLE 726
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 176/349 (50%), Gaps = 19/349 (5%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
LI+ + + VF+ + + + +I YA++G ++L+ M+ NG PD
Sbjct: 195 LIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPD 254
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVK-SKDFNSVIHSLTRLITFYC---NFGDVKSA 183
+T +L AC G R + +HSL ++ + +S + L+ Y N + +A
Sbjct: 255 QYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVS--CGLVDMYAKSHNGQSLHNA 312
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNY-REGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
+ +F++M + NV+ WTA+++G+V++ + + + LF KM + G+ N +T S+L ACAN
Sbjct: 313 REVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACAN 372
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
LG + G+ +H K+ + + +G AL MYA+ G IEEA F + EKN+ +++
Sbjct: 373 LGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSG- 431
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDY 361
+ G G +Q++ + T ++++A + G++ KG+ + +++ +
Sbjct: 432 ----NLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGF 487
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ + + LV + R L +A +V M + N + W S+++ A
Sbjct: 488 GSDRAIGN--SLVSMYSRCGYLVDACQVFDEMN-DHNVISWTSMISGLA 533
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 131/258 (50%), Gaps = 12/258 (4%)
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC--GDLRQVKG--VHSLVVKSKD 159
R AEA ++L+ + + GL P++FT +AC +L + G V LV K
Sbjct: 129 RNGAEA----EALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGF 184
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
+ + + LI + GD+ + + +FD + E+ VV WT +I + + E ++LF
Sbjct: 185 WGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFL 244
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC- 278
M ++G + ++ TL S+LSAC LG+ LG+ +H + + + + L DMYAK
Sbjct: 245 DMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSH 304
Query: 279 --GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK-MFWQMQMSGIKPDDVTLI 335
+ A VF + + NV W +++ G G + V +F +M GI+P+ +T
Sbjct: 305 NGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYS 364
Query: 336 AVLTACSHAGLIEKGKEI 353
++L AC++ G + G++I
Sbjct: 365 SMLKACANLGDQDSGRQI 382
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 15/249 (6%)
Query: 170 LITFYCNFGDVKSAQLLFDQMTE--KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
L+T Y V +A+ +FD M +++V+WTAM + + E + LF + + G+
Sbjct: 90 LLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLL 149
Query: 228 VNELTLVSVLSACANLGASEL----GKWVHEFVNKNCIILND-KLGAALTDMYAKCGYIE 282
N TL + AC ASEL G V V K D +G AL DM+AK G +
Sbjct: 150 PNAFTLCAATQACF---ASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLV 206
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
RVF + E+ V W +I A G +EAV++F M +G +PD TL ++L+AC+
Sbjct: 207 AMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACT 266
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA---RLLDEAYEVIRNMPMEPNA 399
G G+++ +++ +E + LVD+ ++ + L A EV MP + N
Sbjct: 267 ELGSFRLGQQL-HSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMP-KHNV 324
Query: 400 VLWGSLLTA 408
+ W +LL+
Sbjct: 325 MAWTALLSG 333
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/435 (37%), Positives = 247/435 (56%), Gaps = 43/435 (9%)
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVV 155
++ VI GYA+ G + + QMI +G +P+S T LL AC G L Q +H+ +
Sbjct: 363 WSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSL 422
Query: 156 KS-----------KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT--EKNVVTWTAMI 202
K + LI Y K+A+ +FD + E+NVVTWT MI
Sbjct: 423 KKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMI 482
Query: 203 NGHVKQKNYREGIDLFRKM--RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK-- 258
G+ + + + + +F +M + V N T+ +L ACA+L A +GK +H +V +
Sbjct: 483 GGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHH 542
Query: 259 ----------NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
NC+I DMY+KCG ++ A VF + ++N +W S++ G +
Sbjct: 543 EYEPSVYFVANCLI----------DMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGM 592
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
HG G+EA+ +F +MQ +G PDD++ + +L ACSH+G++++G F MRRDY V + +
Sbjct: 593 HGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAE 652
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
HY C++DLL R LD+A++ I+ MPMEP+AV+W +LL+AC +NVELAE A+ +L
Sbjct: 653 HYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVH---SNVELAEYALNKL 709
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVG 488
+ ++ NDG+Y L+SNIYA +W D ++R+LMK+ I K PGCS ++ F VG
Sbjct: 710 VNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVG 769
Query: 489 DGRHPCSEEIYSMLE 503
D HP S EIYS+LE
Sbjct: 770 DRSHPLSPEIYSLLE 784
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 205/459 (44%), Gaps = 77/459 (16%)
Query: 32 HHLPLLQKCTHLVQFKQVHAQIIKASF----------------DNRTISDTQLAK-LIES 74
H LL++C + +Q+H +II + +S L ++ S
Sbjct: 33 HFASLLKECRSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSPKSLGTGVVAS 92
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
+ A V ++ +N ++R + + G R I + +M+ G PD FT
Sbjct: 93 YLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTL 152
Query: 135 PILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
P LKACG+L + +H L+ F S + L+ Y G ++ A L+FD++T
Sbjct: 153 PYALKACGELPSYCCGRALHGLIC-CNGFESNVFVCNALVAMYSRCGSLEDASLVFDEIT 211
Query: 192 EK---NVVTWTAMINGHVKQKNYREGIDLFRKM------RDSGVEVNELTLVSVLSACAN 242
K +V++W +++ HVK N R ++LF +M + + + +++V++L ACA+
Sbjct: 212 RKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACAS 271
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN-- 300
L A K +H + +N + + AL D YAKCG + +A++VF ++ K+V +WN
Sbjct: 272 LKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAM 331
Query: 301 ---------------------------------SIIGGLAIHGCGEEAVKMFWQMQMSGI 327
++I G A GC +EA+ F QM + G
Sbjct: 332 VTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGS 391
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRR----------DYKVEPNVKHYGCLVDL 376
+P+ VT+I++L+AC+ G + +G EI Y++++ ++ Y L+D+
Sbjct: 392 EPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDM 451
Query: 377 LCRARLLDEAYEVIRNMP-MEPNAVLWGSLLTACASADD 414
+ R A + ++P E N V W ++ A D
Sbjct: 452 YSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGD 490
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 206/445 (46%), Gaps = 71/445 (15%)
Query: 31 HHHLPL-LQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL 86
H LP L+ C L + + +H I F++ L + + A L
Sbjct: 149 HFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYS---RCGSLEDASL 205
Query: 87 VFNQIINPS---TFAFNTVIRGYAEAGLGHRGIQLYTQMI------GNGLDPDSFTYPIL 137
VF++I ++N+++ + + ++L+++M D + +
Sbjct: 206 VFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNI 265
Query: 138 LKACGDLR---QVKGVHSLVVKSKDF------NSVIHSLTR------------------- 169
L AC L+ Q+K +HS +++ F N++I + +
Sbjct: 266 LPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDV 325
Query: 170 -----LITFYCNFGDVKSAQLLFDQMTEKN----VVTWTAMINGHVKQKNYREGIDLFRK 220
++T Y G+ +A LF+ M ++N V+TW+A+I G+ ++ +E +D F++
Sbjct: 326 VSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQ 385
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA----------- 269
M G E N +T++S+LSACA+LGA G +H + K C++ D
Sbjct: 386 MILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVY 445
Query: 270 -ALTDMYAKCGYIEEALRVFKIV--LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM--QM 324
AL DMY+KC + A +F + E+NV TW +IGG A +G +A+K+F +M +
Sbjct: 446 NALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKP 505
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG-CLVDLLCRARLL 383
+ P+ T+ +L AC+H + GK+I + R ++ EP+V CL+D+ + +
Sbjct: 506 YAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDV 565
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTA 408
D A V +MP + N V W S+++
Sbjct: 566 DTARNVFDSMP-KRNEVSWTSMMSG 589
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 170/414 (41%), Gaps = 62/414 (14%)
Query: 123 IGNGLDPDSFTYPILLKACGDLRQVKGVHSLVV-------------------KSKDFNSV 163
G + P F LLK C + V+ +H ++ S + S
Sbjct: 25 FGRDVSPTHFAS--LLKECRSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSP 82
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
T ++ Y G K A + +++T V W ++ H+K+ + I + +M
Sbjct: 83 KSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLR 142
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
+G + + TL L AC L + G+ +H + N N + AL MY++CG +E+
Sbjct: 143 AGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLED 202
Query: 284 ALRVFKIVLEK---NVCTWNSIIGGLAIHGCGEEAVKMFWQMQM------SGIKPDDVTL 334
A VF + K +V +WNSI+ A+++F +M M + + D +++
Sbjct: 203 ASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISI 262
Query: 335 IAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
+ +L AC+ + + KEI Y +R + V + L+D + +++A +V M
Sbjct: 263 VNILPACASLKALPQIKEIHSYAIRNGTFADAFVCN--ALIDTYAKCGSMNDAVKVFNVM 320
Query: 394 PMEPNAVLWGSLLTA-CASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQW 452
+ + V W +++T S + GA EL E + I L+ + S + A AQ
Sbjct: 321 EFK-DVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLD------VITWSAVIAGYAQ- 372
Query: 453 DDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
GCS E D + M+ DG P S I S+L A
Sbjct: 373 ------------------RGCSQ-EALDAFQQ-MILDGSEPNSVTIISLLSACA 406
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 75/176 (42%), Gaps = 8/176 (4%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L C HL KQ+HA + + ++ LI+ + A VF+ +
Sbjct: 518 ILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANC-LIDMYSKCGDVDTARNVFDSMP 576
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-KGVH 151
+ ++ +++ GY G G + ++ +M G PD ++ +LL AC V +G++
Sbjct: 577 KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLN 636
Query: 152 SLVVKSKDFNSVIHS--LTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMING 204
+ +D++ V + +I G + A +M E + V W A+++
Sbjct: 637 YFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSA 692
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 188/473 (39%), Positives = 270/473 (57%), Gaps = 14/473 (2%)
Query: 50 HAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
HAQII+ TI+ L + LV S A +F+++ S ++NT++ +
Sbjct: 43 HAQIIRVGLRADTITSNMLMNMYSKCGLVES-----ARKLFDEMPVRSLVSWNTMVGSHT 97
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVI 164
+ G + + L+ QM G FT ++ AC + + K +H +K+ +S +
Sbjct: 98 QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTA-LDSNV 156
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
T L+ Y G VK A L+F+ M E++ VTW++M+ G+V+ + Y E + LF + +
Sbjct: 157 FVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAM 216
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
G+E N+ T+ S LSACA A GK V K I N + ++L DMYAKCG IEEA
Sbjct: 217 GLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEA 276
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
VF V EKNV WN+I+ G + H EA+ F +MQ GI P+D+T I+VL+ACSH
Sbjct: 277 YTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHL 336
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
GL+EKG++ F M R + V PNV HY C+VD+L RA LL EA + I MP + A +WGS
Sbjct: 337 GLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGS 396
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL +C N+ELAE+A + L ++EP N GN+VL+SNIYAA +W++ + R L+KE
Sbjct: 397 LLASCRIYR---NLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKE 453
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
K G S IEI VH FMVG+ HP EIY LE + +++ Y A+
Sbjct: 454 SKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAK 506
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 218/350 (62%), Gaps = 3/350 (0%)
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
+T ++ G+ +A+ LFD M +++ V W AMI G+V RE + LF +MR +G
Sbjct: 271 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGA 330
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
V E+TLVS L+ACA LGA E GKWVH + + L+ LG AL DMY+KCG + A+
Sbjct: 331 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 390
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF + E+NV TW S + GLA++G G + + +F +M+ +G++P+ VT + VL CS AGL
Sbjct: 391 VFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGL 450
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+++G+ F +M+ ++ ++P ++HYGC+VDL RA LD+A I MP+EP+ +WG+LL
Sbjct: 451 VDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 510
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
A + NVEL + AM++L+ +E ND +VL+SNIYA W +R +MK +
Sbjct: 511 NA---SRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKG 567
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
+ K PGCS IE+ VHEF VG HP +EI ML + LR + Y A
Sbjct: 568 VKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIA 617
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 8/245 (3%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
++ +L + A +F+ + A+N +I GY G ++L+ +M G
Sbjct: 274 MVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVG 333
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T L AC G L + K VHS S+ + T LI Y G V +A +F
Sbjct: 334 EVTLVSALTACAQLGALERGKWVHS-CAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVF 392
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
D M E+NV TWT+ ++G R+ + LF++M +GVE N +T V VL C+ G +
Sbjct: 393 DSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVD 452
Query: 248 LGKWVHEFVNKNCIILN--DKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIG 304
G+ + + N I + G + D+Y + G +++A+ + LE + W +++
Sbjct: 453 EGRACFDSMKSNHGIDPWLEHYG-CMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLN 511
Query: 305 GLAIH 309
IH
Sbjct: 512 ASRIH 516
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 4/156 (2%)
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
+S T LI+ +A A VF+ + + + + + + G A G+G + L+ +M
Sbjct: 367 LSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRM 426
Query: 123 IGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
G++P+ T+ ++L+ C G + + + + + + + ++ Y G
Sbjct: 427 ESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGR 486
Query: 180 VKSAQLLFDQMT-EKNVVTWTAMINGHVKQKNYREG 214
+ A + M E + W A++N KN G
Sbjct: 487 LDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELG 522
>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
Length = 641
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 186/473 (39%), Positives = 272/473 (57%), Gaps = 14/473 (2%)
Query: 50 HAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
HAQII+ TI+ L + LV S A +F+++ S ++NT++ +
Sbjct: 70 HAQIIRVGLRADTITSNMLMNMYSKCGLVES-----ARKLFDEMPVRSLVSWNTMVGSHT 124
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVI 164
+ G + + L+ QM G+ FT ++ AC + + K +H +K+ +S +
Sbjct: 125 QNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTA-LDSNV 183
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
T L+ Y G VK A L+F+ M E++ VTW++M+ G+V+ + Y E + LF + +
Sbjct: 184 FVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAM 243
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
G+E N+ T+ S LSACA A GK V + K I N + ++L DMYAKCG IEEA
Sbjct: 244 GLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEA 303
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
VF V EKNV WN+++ G + H EA+ F +MQ GI P+++T I+VLTACSH
Sbjct: 304 YIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHL 363
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
GL+EKG++ F M R + V PNV HY C+VD+L RA LL EA ++I MP + A +WGS
Sbjct: 364 GLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGS 423
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
LL +C N+E AE+A + L ++EP N GN+VL+SNIYAA +W++ + R L+KE
Sbjct: 424 LLASCRIYR---NLEXAEVAAKHLFEIEPHNAGNHVLLSNIYAANNRWEEVARARNLLKE 480
Query: 465 RNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
K G S IEI VH FMVG+ HP EIY LE + +++ Y A+
Sbjct: 481 SKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAK 533
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/349 (42%), Positives = 221/349 (63%), Gaps = 3/349 (0%)
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
S T ++ C G V A+ LFD M E+N+++W AMI+G+VK + + +++F +MR G
Sbjct: 163 SWTTMVGGLCRLGLVDDARKLFDGMPERNLISWNAMISGYVKAGRFLDALEVFDQMRALG 222
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
+E N S + AC G G+ VH +V ++ I +++KL A+ DMY KCG +EEA
Sbjct: 223 IEGNGFVAASAVVACTGAGVLARGREVHRWVEQSGITMDEKLATAVVDMYCKCGSVEEAW 282
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
VFK++ K + +WN +IGGLA+HG ++A+++F +M+ + PDDVTL+ VLTAC+H G
Sbjct: 283 HVFKVLPTKGLTSWNCMIGGLAVHGRCKDAIELFHEMEREDVAPDDVTLVNVLTACAHTG 342
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
++ G F + + Y +EP ++HYGC+VDL RA LLDEA +VI +MPMEP+ + G+L
Sbjct: 343 MVSDGHNYFNYIVQRYGIEPKMEHYGCMVDLFGRAGLLDEAKKVIDDMPMEPDIGVLGAL 402
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
AC D ++L E R+I+L+P N G YVL++N+ A+ QW D K+RRLM ER
Sbjct: 403 FGACKIHRD---LDLGEAIGWRVIELDPQNSGRYVLLANLLASAGQWVDVAKVRRLMDER 459
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
N+ K G SVIEI+ V EF G H +EI++ ++ + +R E Y
Sbjct: 460 NVSKEAGRSVIEIDGEVCEFQCGSLCHAQEKEIFAAVKDMMRKIRLEGY 508
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 112/231 (48%), Gaps = 6/231 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-- 141
A +F+ + + ++N +I GY +AG ++++ QM G++ + F + AC
Sbjct: 180 ARKLFDGMPERNLISWNAMISGYVKAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTG 239
Query: 142 -GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
G L + + VH V +S T ++ YC G V+ A +F + K + +W
Sbjct: 240 AGVLARGREVHRWVEQSG-ITMDEKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNC 298
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG-ASELGKWVHEFVNKN 259
MI G ++ I+LF +M V +++TLV+VL+ACA+ G S+ + + V +
Sbjct: 299 MIGGLAVHGRCKDAIELFHEMEREDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRY 358
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGGLAIH 309
I + + D++ + G ++EA +V + +E ++ ++ G IH
Sbjct: 359 GIEPKMEHYGCMVDLFGRAGLLDEAKKVIDDMPMEPDIGVLGALFGACKIH 409
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 35/159 (22%)
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEK---NVCTWNSIIGGLAIHGCGEEAVKMF------- 319
AL Y G + A R+F +V +W +++GGL G ++A K+F
Sbjct: 132 ALLAAYLANGRADLASRLFGSCSSPGDLDVVSWTTMVGGLCRLGLVDDARKLFDGMPERN 191
Query: 320 ---W---------------------QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
W QM+ GI+ + + + AC+ AG++ +G+E+ +
Sbjct: 192 LISWNAMISGYVKAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTGAGVLARGREV-H 250
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+ + K +VD+ C+ ++EA+ V + +P
Sbjct: 251 RWVEQSGITMDEKLATAVVDMYCKCGSVEEAWHVFKVLP 289
>gi|125554650|gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
Length = 602
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/349 (42%), Positives = 220/349 (63%), Gaps = 3/349 (0%)
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
S T ++ C G V A+ +FD M +N+V+W +MI+G+VK + + +++F +MR G
Sbjct: 166 SWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMRALG 225
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
VE N S L AC GA G+ ++ +V ++ I ++ KL A+ DMY KCG ++EA
Sbjct: 226 VEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVVDMYCKCGCVDEAW 285
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
RVF + + + TWN +IGG A+HG ++A+++F QM+ +G+ PDDVTL+ VLTAC+HAG
Sbjct: 286 RVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTACAHAG 345
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
+ +G+ ++ + +EP +HYGC+VDL RA LDEA +VI MPM+P+ + G+L
Sbjct: 346 EVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLAVLGAL 405
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L AC D V+L E R+I L+P N G YVL++N+ A +WD+ GK+RRLM ER
Sbjct: 406 LGACKIHGD---VDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVRRLMDER 462
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
N+ K G SVIE++ EF G+ RHP + EIY+M + +R E Y
Sbjct: 463 NVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGY 511
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 129/257 (50%), Gaps = 6/257 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
++ L + A VF+ + + ++N++I GY +A ++++ +M G++ +
Sbjct: 170 MVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMRALGVEGN 229
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
F L AC G L + + ++ V +S T ++ YC G V A +F
Sbjct: 230 GFVATSALVACTGAGALGRGREIYRWVEQSG-IEVDAKLATAVVDMYCKCGCVDEAWRVF 288
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG-AS 246
D + + + TW MI G + ++LF +M +GV +++TL++VL+ACA+ G S
Sbjct: 289 DSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTACAHAGEVS 348
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGG 305
E ++++ V+++ I + + D++ + G ++EA +V ++ ++ ++ +++G
Sbjct: 349 EGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLAVLGALLGA 408
Query: 306 LAIHGCGEEAVKMFWQM 322
IHG + + W++
Sbjct: 409 CKIHGDVDLGEAIGWRV 425
>gi|297846398|ref|XP_002891080.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336922|gb|EFH67339.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 170/492 (34%), Positives = 281/492 (57%), Gaps = 16/492 (3%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
++Q C Q KQ+ + + A + ++L + ++ +++A +F I P
Sbjct: 9 MIQNCVTFSQIKQLQSHFLTAGHFQSSFLRSRLLERC-AISPFGDLSFAVKIFRHIPKPL 67
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP-----DSFTYPILLKACGDL---RQV 147
T +N +IRG+A + Y M+ D+ T LKAC +
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQRSSSSALCRVDALTCSFTLKACARALCSSAM 127
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+H + + + F++ T L+ Y GD+ SA LFD+M+ ++V +W A+I G V
Sbjct: 128 VQIHCQISR-RGFSADALLCTTLLDAYSKNGDLISALKLFDEMSVRDVASWNALIAGLVA 186
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG-KWVHEFVNKNCIILNDK 266
E ++L+++M G+ +E+T+V+ L AC++LG + G K +H ++ + N
Sbjct: 187 GNRASEALELYKRMEMEGIRRSEVTVVAALGACSHLGDVKEGEKILHGYIKDEKLDHNVI 246
Query: 267 LGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
+ A+ DMY+KCG++++A +VF + +K+V TWN++I G ++HG A+++F +++ +
Sbjct: 247 VSNAVIDMYSKCGFVDKAFQVFEQFTGKKSVVTWNTMITGFSVHGEAHRALEIFEKLEHN 306
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
GIKPDDV+ +A LTAC H GL+E G IF NM + VEPN+KHYGC+VDLL RA L E
Sbjct: 307 GIKPDDVSYLAALTACRHTGLVEYGISIFNNMACN-GVEPNMKHYGCVVDLLSRAGRLRE 365
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
A+++I +M M P+ VLW SLL A ++ NVE+AEIA ++ ++ NDG++VL+SN+
Sbjct: 366 AHDIICSMSMVPDPVLWQSLLGA---SEIHNNVEMAEIASRKIKEMGVNNDGDFVLLSNV 422
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
YAA+ +W D G +R M+ + + K PG S IE +H+F D H EIY ++ +
Sbjct: 423 YAAQGRWKDVGLVRDDMESKQVKKVPGISYIEAKGTIHQFHNSDKSHEQWREIYEKIDEI 482
Query: 506 AISLREECYAAR 517
+RE+ Y A+
Sbjct: 483 RFKIREDGYVAQ 494
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 267/485 (55%), Gaps = 14/485 (2%)
Query: 36 LLQKCT---HLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL+KCT L Q + VH +I++ F + + + L + + A VF+++
Sbjct: 57 LLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNM---YAKCGSLEEARKVFDKMP 113
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
+ T+I GY++ + L+ QM+ G P+ FT ++KA R+
Sbjct: 114 ERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQ 173
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H VK F+S +H + L+ Y +G + AQL+FD + +N V+W A+I GH ++
Sbjct: 174 LHGFCVKC-GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRC 232
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ ++LF+ M G + + S+ AC++ G E GKWVH ++ K+ L G
Sbjct: 233 GTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 292
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
L DMYAK G I +A ++F + +++V +WNS++ A HG G EAV F +M+ GI+P
Sbjct: 293 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRP 352
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
++++ ++VLTACSH+GL+++G + M++D + HY +VDLL RA L+ A
Sbjct: 353 NEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALRF 411
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I MP+EP A +W +LL AC N EL A E + +L+P + G +V++ NIYA+
Sbjct: 412 IEEMPIEPTAAIWKALLNACRMHK---NTELGAYAAEHVFELDPDDPGPHVILYNIYASG 468
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+W+DA ++R+ MKE + K P CS +EI + +H F+ D RHP EEI E V +
Sbjct: 469 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 528
Query: 510 REECY 514
+E Y
Sbjct: 529 KELGY 533
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 2/190 (1%)
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
+ S + V+ ++L C G+ VH + ++ + + L +MYAKCG
Sbjct: 42 LEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGS 101
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
+EEA +VF + E++ TW ++I G + H +A+ +F QM G P++ TL +V+ A
Sbjct: 102 LEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKA 161
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
+ G ++ + + NV L+DL R L+D+A +++ + N V
Sbjct: 162 AAAERRGCCGHQL-HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA-QLVFDALESRNDV 219
Query: 401 LWGSLLTACA 410
W +L+ A
Sbjct: 220 SWNALIAGHA 229
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 184/558 (32%), Positives = 282/558 (50%), Gaps = 76/558 (13%)
Query: 18 ANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVN 77
A K ++ TK L+ C L Q KQ+H QI K D + T+L + +
Sbjct: 13 ATQIKEADPMTKDSCLNESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIAS 72
Query: 78 SSQIAYAHLVFNQI-----INPSTFAFNTVIRGYAEAGLGHRGIQLYTQM---------- 122
+ YA F + + F N++IRGY+ AGLG I LY +M
Sbjct: 73 PESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHY 132
Query: 123 -------------------------IGNGLDPDSFTYPILL---KACGDL---------- 144
+ GL+ D F L+ CG +
Sbjct: 133 TFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGM 192
Query: 145 --RQVKGVHSLVV------KSKDFNSVIHSL------TRLITFYCNFGDVKSAQLLFDQM 190
R V SL+ + K+ S+ + L+ Y G + +A+ LFD+
Sbjct: 193 SERNVVSWTSLICGYARGDRPKEAVSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDEC 252
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL-----GA 245
++N+V + +++ + +Q RE + + +M G + +T++S +SA A L G
Sbjct: 253 VDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGK 312
Query: 246 SELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGG 305
G WVH ++ KN I + +L AL DM+A+CG + A++VF + E++V W + IG
Sbjct: 313 VCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGT 372
Query: 306 LAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
+A+ G GE A +F QM + G+KPD V + VLTACSH G +E+G IF ++ D+ + P
Sbjct: 373 MAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISP 431
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAM 425
++HYGC+VDLL RA LL EA+++I++MPMEPN V+WGSLL AC NVE+A A
Sbjct: 432 QIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHK---NVEMATYAA 488
Query: 426 ERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEF 485
ER+ +L P G +VL+SNIYA+ +W D ++R ++E+ + K PG S +++N V+HEF
Sbjct: 489 ERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEF 548
Query: 486 MVGDGRHPCSEEIYSMLE 503
GD HP I ML+
Sbjct: 549 TSGDESHPEMTHIALMLQ 566
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/478 (34%), Positives = 265/478 (55%), Gaps = 18/478 (3%)
Query: 34 LPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFN 89
+ +L+ C L + K +H Q+IK+ + D+ L L+ YA VF
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGIN----PDSHLWNSLVNVYAKCGSANYACKVFG 250
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-- 147
+I ++ +I G+ G G G++++ QM+ G +P+ +T+ +L++C L V
Sbjct: 251 EIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDL 309
Query: 148 -KGVHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
K VH+ +VK S D N + T L+ Y ++ A+ +F+++ ++++ WT ++ G+
Sbjct: 310 GKQVHAQIVKNSLDGNDFVG--TALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGY 367
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ + + F +M+ GV+ NE TL S LS C+ + + G+ +H K +
Sbjct: 368 AQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDM 427
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
+ +AL DMYAKCG +E+A VF ++ ++ +WN+II G + HG G +A+K F M
Sbjct: 428 FVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDE 487
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G PD+VT I VL+ACSH GLIE+GK+ F ++ + Y + P ++HY C+VD+L RA E
Sbjct: 488 GTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHE 547
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
I M + N ++W ++L AC N+E E A +L +LEP D NY+L+SN+
Sbjct: 548 VESFIEEMKLTSNVLIWETVLGACKMH---GNIEFGERAAMKLFELEPEIDSNYILLSNM 604
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
+AAK WDD +R LM R + K PGCS +E+N VH F+ DG HP EI+ L+
Sbjct: 605 FAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQ 662
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 147/318 (46%), Gaps = 7/318 (2%)
Query: 113 HRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTR 169
+QL+ M + + F + L+ A GD + +H+ V K F S I
Sbjct: 72 QEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCK-YGFESDILISNA 130
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
+T Y V++ F M +N+ + +++G + +G + ++ G E N
Sbjct: 131 FVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPN 190
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
T +S+L CA+ G GK +H V K+ I + L +L ++YAKCG A +VF
Sbjct: 191 MYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFG 250
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ E++V +W ++I G G G +++F QM G P+ T I++L +CS ++
Sbjct: 251 EIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDL 309
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
GK++ + ++ ++ N LVD+ + R L++A E I N ++ + W ++
Sbjct: 310 GKQVHAQIVKN-SLDGNDFVGTALVDMYAKNRFLEDA-ETIFNRLIKRDLFAWTVIVAGY 367
Query: 410 ASADDGANVELAEIAMER 427
A G I M+R
Sbjct: 368 AQDGQGEKAVKCFIQMQR 385
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 137/294 (46%), Gaps = 8/294 (2%)
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
H + L+ Y ++ A+ + ++M ++V W ++ +E + LF MR +
Sbjct: 25 HLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHT 84
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEA 284
+ +N+ S++SA A+LG + G+ +H V K + + A MY K +E
Sbjct: 85 RIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENG 144
Query: 285 LRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHA 344
+ FK ++ +N+ + N+++ G ++ ++ Q+ + G +P+ T I++L C+
Sbjct: 145 WQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASK 204
Query: 345 GLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGS 404
G + +GK I + + + P+ + LV++ + + A +V +P E + V W +
Sbjct: 205 GDLNEGKAIHGQVIKS-GINPDSHLWNSLVNVYAKCGSANYACKVFGEIP-ERDVVSWTA 262
Query: 405 LLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWD-DAGK 457
L+T + G+ + + + E FN Y +S + + + D D GK
Sbjct: 263 LITGFVAEGYGSGLRIFNQMLA-----EGFNPNMYTFISILRSCSSLSDVDLGK 311
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/487 (34%), Positives = 271/487 (55%), Gaps = 14/487 (2%)
Query: 34 LPLLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
+ +LQ C + + VH +KA +T T L++ + A LVF+
Sbjct: 2 VSILQACANCGDVSLGRAVHGSGVKACVHWKT---TFCNTLLDMYAKCGVLDGAILVFDL 58
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQV 147
+ + + ++I YA GL I+L+ +M G+ PD FT +L AC G L
Sbjct: 59 MSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
K VH+ + + D S I L+ Y G ++ A +F +M K++++W MI G+ K
Sbjct: 119 KDVHNYI-RENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSK 177
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
E + LF M ++ + TL +L ACA+L + + GK VH + +N + ++
Sbjct: 178 NSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQV 236
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
AL DMY KCG A +F ++ K++ TW +I G +HG G A+ F +M+ +GI
Sbjct: 237 ANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGI 296
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
+PD+V+ I++L ACSH+GL+++G F M+ + V+P ++HY C+VDLL R+ L AY
Sbjct: 297 EPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAY 356
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
+ I++MP+EP+A +WG+LL+ C D V+LAE E + +LEP N G YVL++N YA
Sbjct: 357 KFIKSMPIEPDATIWGALLSGCRIHHD---VKLAEKVAEHVFELEPENTGYYVLLANTYA 413
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
+W++ K+R+ + R + KNPGCS IE+ VH F+ G+ HP +++I +L+ +
Sbjct: 414 EAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRS 473
Query: 508 SLREECY 514
++EE Y
Sbjct: 474 KMKEEGY 480
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
+VS+L ACAN G LG+ VH K C+ L DMYAKCG ++ A+ VF ++
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
+ V TW S+I A G +EA+++F +M G+ PD T+ VL AC+ G +E GK+
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+ +N R+ ++ N+ L+D+ + +++A V MP++ + + W +++
Sbjct: 121 V-HNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMI 172
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 165/476 (34%), Positives = 270/476 (56%), Gaps = 13/476 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQ+H Q K F + L + QI+YA +VF+++ + + ++ ++I GY
Sbjct: 105 KQIHGQTFKYGFGSNVFVQNSLVSMYAKF---GQISYARIVFDKLHDRTVVSWTSIISGY 161
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKGVHSLVVK-SKDFNS 162
+ G + ++ +M + PD ++ A DL Q K +H LV K +F
Sbjct: 162 VQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEP 221
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
I + L T Y G V+ A+ F++M + N++ W AMI+G+ E I LFR+M
Sbjct: 222 DI--VISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMI 279
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ V+ +T+ S + A A +G+ EL +W+ +++K+ + + L DMYAKCG I
Sbjct: 280 TKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIY 339
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A VF V +K+V W+ +I G +HG G+EA+ ++ +M+ +G+ P+D T I +LTAC
Sbjct: 340 LARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACK 399
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
++GL+++G E+F+ M D+ +EP+ +HY C+VDLL RA L++AY+ I +MP++P +W
Sbjct: 400 NSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVW 458
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL+AC V L EIA E+L L+P+N G+YV +SN+YA+ W +R +M
Sbjct: 459 GALLSACKIH---RKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMM 515
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
++ + K+ G S IEIN + F VGD HP S+EI+ L+ + L+ Y M
Sbjct: 516 TQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHM 571
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 166/308 (53%), Gaps = 9/308 (2%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
QV+ Q+I + + K I + ++ + YAH F ++ P +N +I+
Sbjct: 2 HLDQVYVQLIVSGLHK---CRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIK 58
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG----VHSLVVKSKDF 160
GY + + I++Y M + + P+ FT+ +LKACG V+G +H K F
Sbjct: 59 GYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGG-TSVEGIGKQIHGQTFKY-GF 116
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
S + L++ Y FG + A+++FD++ ++ VV+WT++I+G+V+ + E +++F++
Sbjct: 117 GSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKE 176
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
MR V+ + + LVSV++A N+ GK +H V K + + +LT MYAK G
Sbjct: 177 MRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGL 236
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
+E A F + + N+ WN++I G A +G GEEA+K+F +M I+ D +T+ + + A
Sbjct: 237 VEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLA 296
Query: 341 CSHAGLIE 348
+ G +E
Sbjct: 297 SAQVGSLE 304
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 140/315 (44%), Gaps = 39/315 (12%)
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCN 176
Q+Y Q+I +GL F + AC +
Sbjct: 5 QVYVQLIVSGLHKCRFLMIKFINAC---------------------------------LH 31
Query: 177 FGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSV 236
FGDV A F +++E +++ W A+I G+ ++ I ++ M+ S V N T + V
Sbjct: 32 FGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYV 91
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNV 296
L AC +GK +H K N + +L MYAK G I A VF + ++ V
Sbjct: 92 LKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTV 151
Query: 297 CTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
+W SII G +G EA+ +F +M+ +KPD + L++V+TA ++ + +GK I
Sbjct: 152 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 211
Query: 357 MRR-DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+ + + EP++ + + R L E N +PN +LW ++++ A++G
Sbjct: 212 VTKLGLEFEPDIV---ISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMIS--GYANNG 266
Query: 416 ANVELAEIAMERLIK 430
E ++ E + K
Sbjct: 267 YGEEAIKLFREMITK 281
>gi|326489701|dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/352 (44%), Positives = 220/352 (62%), Gaps = 11/352 (3%)
Query: 152 SLVVKS-KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
S+ V+S +N++I L R G V +A+ +FD M E + V+WTA+I+G VK
Sbjct: 131 SMTVRSLVTYNTMITGLMR-------NGLVAAAREVFDGMPEPDKVSWTALIDGCVKNGR 183
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
+ E ID F M GVE + +TLV+ +SACA +GA LG WVH V + + N ++ +
Sbjct: 184 HDEAIDCFHAMLLDGVEPDYVTLVAAISACAEVGALGLGMWVHRLVTRERLEGNIRIANS 243
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMYA+CG +E A +VF + + V +WNS+I G A +G +A++ F M+ G +PD
Sbjct: 244 LIDMYARCGQVEFARQVFDSMRNRTVVSWNSMIVGFAANGRCTDAIEHFEAMRRKGFRPD 303
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
VT VLTACSHAGL ++G + MR ++ + ++HYGC+VDLL RA L EA V+
Sbjct: 304 AVTFTGVLTACSHAGLTDEGLRYYKAMRAEHGITARMEHYGCVVDLLGRAGRLGEAMSVV 363
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
MPM PN V+ G+LL C D V++AE M+ L++ +P D NYVL+SNIYAA
Sbjct: 364 ATMPMRPNEVVLGALLAGCRMHGD---VDMAEQLMQHLLEQDPGGDSNYVLLSNIYAATG 420
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
+WD AGK+R LMK R + K PG S +EI+ VHEF+ GD HP ++E++ ML
Sbjct: 421 KWDGAGKVRGLMKARGVKKRPGRSAVEIDGDVHEFVCGDRSHPQADEVFDML 472
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 6/245 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I L+ + +A A VF+ + P ++ +I G + G I + M+ +G++PD
Sbjct: 143 MITGLMRNGLVAAAREVFDGMPEPDKVSWTALIDGCVKNGRHDEAIDCFHAMLLDGVEPD 202
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T + AC G L VH LV + + I LI Y G V+ A+ +F
Sbjct: 203 YVTLVAAISACAEVGALGLGMWVHRLVTRER-LEGNIRIANSLIDMYARCGQVEFARQVF 261
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
D M + VV+W +MI G + I+ F MR G + +T VL+AC++ G ++
Sbjct: 262 DSMRNRTVVSWNSMIVGFAANGRCTDAIEHFEAMRRKGFRPDAVTFTGVLTACSHAGLTD 321
Query: 248 LG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSIIGG 305
G ++ ++ I + + D+ + G + EA+ V + + N +++ G
Sbjct: 322 EGLRYYKAMRAEHGITARMEHYGCVVDLLGRAGRLGEAMSVVATMPMRPNEVVLGALLAG 381
Query: 306 LAIHG 310
+HG
Sbjct: 382 CRMHG 386
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 38/254 (14%)
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDS--GVEVNELTLVSVLSACANLGASELGK- 250
+VV+WTA I ++ + M S N++TL++VLSACA +S L +
Sbjct: 30 DVVSWTAAIARPAREGDLPATAAALSAMLSSPAAPAPNDVTLLTVLSACAGAPSSPLARP 89
Query: 251 ------------WVHEFVNKNCII---LNDKLGAALTDMYA------------------K 277
+ + C+ L +L ++ +
Sbjct: 90 LALSLHALAAKLFPSHLLLCTCLARFYLASRLPHLALQLFGSMTVRSLVTYNTMITGLMR 149
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
G + A VF + E + +W ++I G +G +EA+ F M + G++PD VTL+A
Sbjct: 150 NGLVAAAREVFDGMPEPDKVSWTALIDGCVKNGRHDEAIDCFHAMLLDGVEPDYVTLVAA 209
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
++AC+ G + G + + R+ ++E N++ L+D+ R ++ A +V +M
Sbjct: 210 ISACAEVGALGLGMWVHRLVTRE-RLEGNIRIANSLIDMYARCGQVEFARQVFDSM-RNR 267
Query: 398 NAVLWGSLLTACAS 411
V W S++ A+
Sbjct: 268 TVVSWNSMIVGFAA 281
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 173/491 (35%), Positives = 273/491 (55%), Gaps = 17/491 (3%)
Query: 31 HHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIE--SLVNSSQIAYAHLVF 88
H+ L L K + + HAQII+ + ++ L + SLV+S A F
Sbjct: 47 HYLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDS-----ARKKF 101
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLR 145
N++ S ++NTVI + ++L QM G + FT +L C +
Sbjct: 102 NEMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAIL 161
Query: 146 QVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMING 204
+ +H+ +K+ D N + T L+ Y +K A +F+ M EKN VTW++M+ G
Sbjct: 162 ECMQLHAFSIKAAIDSNCFVG--TALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAG 219
Query: 205 HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
+V+ + E + +FR + G + + + S +SACA L GK VH +K+ N
Sbjct: 220 YVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSN 279
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLE-KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+ ++L DMYAKCG I EA VF+ VLE +++ WN++I G A H EA+ +F +MQ
Sbjct: 280 IYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQ 339
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
G PDDVT + VL ACSH GL E+G++ F M R + + P+V HY C++D+L RA L+
Sbjct: 340 QRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLV 399
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
+AY++I MP + +WGSLL +C N+E AEIA + L ++EP N GN++L++
Sbjct: 400 HKAYDLIERMPFNATSSMWGSLLASCKIY---GNIEFAEIAAKYLFEMEPNNAGNHILLA 456
Query: 444 NIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
NIYAA +WD+ + R+L++E ++ K G S IEI + +H F VG+ HP ++IY+ L+
Sbjct: 457 NIYAANKKWDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLD 516
Query: 504 YVAISLREECY 514
+ + L++ Y
Sbjct: 517 NLVVELKKLNY 527
>gi|242033621|ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
gi|241918059|gb|EER91203.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
Length = 521
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 255/489 (52%), Gaps = 45/489 (9%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
L +C + +Q+HA ++K+ I+ ++ ++YA + P+
Sbjct: 39 LHTRCASMAHLRQLHAALVKSGLAKDPIAASRAVAFCAG--PGRDVSYAERLVRHHPRPN 96
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA------CGDLRQVKG 149
+F +NTVIR ++ + L+ M+G+ P+ T P LL A GD + G
Sbjct: 97 SFMWNTVIRALSDGARPEAAVALFVDMLGSPTPPERRTLPSLLAAYARLGRAGDGAALHG 156
Query: 150 VH-----------------------------SLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
+ +L + +F++V + I G V
Sbjct: 157 MALKLGLAGDAYVRNATIAMYASCARADEALALFGQCPEFDAV--ACNSAIVALARAGRV 214
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
A+ +FD M E+ V TW+AM++ + + E + LF M+ GVE N LVSVL C
Sbjct: 215 DEARAVFDGMPERTVATWSAMVSAYARAARCGEALALFSAMQADGVEPNANVLVSVLGCC 274
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN---VC 297
A+LGA + G WVH +++++ + +N + AL DMY KCG +++A +VF + +
Sbjct: 275 ASLGALDQGAWVHAYIDRHGVAMNALVVTALVDMYCKCGSVDDARQVFDAARSQGSAKLS 334
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
+WNS++ GLA+HG EAV +F +++ G+ PD+VT IAVLTA HAG+ ++ + F +M
Sbjct: 335 SWNSMMQGLAVHGQWREAVALFSELRSYGLSPDNVTFIAVLTAYGHAGMPDEAQAAFASM 394
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
++ VEP ++HYGCLVD L RA L EA + IR+MPM P+A +WG+LL+ C D
Sbjct: 395 ATEHSVEPGIEHYGCLVDALARAGRLREAEDAIRSMPMAPDAAVWGALLSGCRLHGD--- 451
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
EL A ++ +P + G YVL +++ A +R M+E + K PGCS+IE
Sbjct: 452 AELGARAAREAVRCDPRDSGAYVLAASVLARGGNPGRGAGVRGRMREAGVGKVPGCSMIE 511
Query: 478 INDVVHEFM 486
+N VVHEF+
Sbjct: 512 VNGVVHEFV 520
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 162/437 (37%), Positives = 267/437 (61%), Gaps = 11/437 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKAC- 141
A VF+ I ++N +++ Y G+ +++ M+ G + P++ T ++L AC
Sbjct: 206 ARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNAVTVAVVLAACR 265
Query: 142 --GDLRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
GDL + V ++ + +S++ S L+ Y G++ A+ +FD + +K++V W
Sbjct: 266 DQGDLVLGRWVEEWSWSARMEMDSLVGSA--LLGMYEKCGEIAEARRVFDTIIDKDIVAW 323
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
AMI G+ + E I LF MR +G+ +++TL VLSAC+ +GA ELG + + ++
Sbjct: 324 NAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASR 383
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+ N +G AL DMYAKCG +++A+ VF+ + KNV +WN++I GLA +G G+EA++
Sbjct: 384 RGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQH 443
Query: 319 FWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL 377
F M+ G+KPDD+T I VL+AC HAGL++ GK F ++ ++++ P ++HY C+VDLL
Sbjct: 444 FQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLL 503
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDG 437
R+ L+EA++ I +P + +AV+ G+LL AC NVE+ E + R+I+LEP N
Sbjct: 504 ARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCK---NVEIGERVINRIIQLEPTNSW 560
Query: 438 NYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEE 497
NYV+ S IYA+ + DD+ KMR LM+ER + K PGCS +E++ V EF GD +++
Sbjct: 561 NYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGCSWVEVSGKVLEFYAGDEPQHGADD 620
Query: 498 IYSMLEYVAISLREECY 514
+Y +L+ + +R E Y
Sbjct: 621 MYQVLDLLVDEMRLEGY 637
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 209/397 (52%), Gaps = 14/397 (3%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQII-KASFDNRTISDTQLAKLIESLVNSSQI 81
+S AT S+ LL KC L KQ+HA ++ +ASF L+ S +S+
Sbjct: 41 SSPAATASYLASNLLPKCRSLAAVKQLHAHLLHRASFPYNHFLSKLLSLFTSSSSSSAAA 100
Query: 82 AYAHLVFNQIIN---PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
A + + + P+ F++N IR +A + H ++L+ M+ + + PDS+T P LL
Sbjct: 101 AASDYALLLLASHSAPTAFSYNVAIRFFASS-RPHTSLRLFLHMLRSAIRPDSYTLPFLL 159
Query: 139 KACGDLRQ---VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
A + H+L+ K N H++ LIT Y D +A+ +FD + ++V
Sbjct: 160 LAAARYPAPSLARAAHALLGKI-GLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDV 218
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSG-VEVNELTLVSVLSACANLGASELGKWVHE 254
V+W AM+ + + E +FR M G V N +T+ VL+AC + G LG+WV E
Sbjct: 219 VSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEE 278
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+ + ++ +G+AL MY KCG I EA RVF +++K++ WN++I G A +G E
Sbjct: 279 WSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNE 338
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYGCL 373
A+ +F M+++G++PD +TL VL+ACS G +E G E+ Y RR + NV L
Sbjct: 339 AISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRG--LYSNVYVGTAL 396
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
VD+ + LD+A EV R MP + N W +L+ A
Sbjct: 397 VDMYAKCGDLDKAIEVFRKMPCK-NVASWNALICGLA 432
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 118/236 (50%), Gaps = 13/236 (5%)
Query: 72 IESLVNSS---------QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
++SLV S+ +IA A VF+ II+ A+N +I GYA+ G+ + I L+ M
Sbjct: 287 MDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSM 346
Query: 123 IGNGLDPDSFTYPILLKACGDLRQVKGVHSL--VVKSKDFNSVIHSLTRLITFYCNFGDV 180
G+ PD T +L AC + ++ L + S ++ T L+ Y GD+
Sbjct: 347 RIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDL 406
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR-DSGVEVNELTLVSVLSA 239
A +F +M KNV +W A+I G E I F+ MR + G++ +++T + VLSA
Sbjct: 407 DKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSA 466
Query: 240 CANLGASELGK-WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
C + G + GK W + + II + + + D+ A+ G++EEA + + +K
Sbjct: 467 CVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDK 522
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 267/457 (58%), Gaps = 14/457 (3%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q + VH + ++ +T + LI V + A +F+++ + + ++ T+I
Sbjct: 34 QARLVHEHVFSNGYEPKTF---LINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMIS 90
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVI 164
Y+ + L H+ + M+ G+ P+ +TY +L+AC L ++ +H ++K S +
Sbjct: 91 AYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQLHGSILKVG-LESDV 149
Query: 165 HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS 224
+ LI Y G+ A +F++M ++V W ++I G + + E + L+++M+ +
Sbjct: 150 FVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRA 209
Query: 225 GVEVNELTLVSVLSACANLGASELGKWVHEFVNK--NCIILNDKLGAALTDMYAKCGYIE 282
++ TL SVL AC L ELG+ VH V K +ILN+ AL DMY KCG +E
Sbjct: 210 DFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNN----ALLDMYCKCGSLE 265
Query: 283 EALRVF-KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
+A +F +++ EK+V +W+++I GLA +G +A+K+F M+ G KP+ +T++ VL AC
Sbjct: 266 DANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFAC 325
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SHAGL+ G F +M+ + ++P +HYGC++DLL RA LDEA ++I M EP+AV
Sbjct: 326 SHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVT 385
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
W LL AC NV+LA A + ++KL+P + G Y+L+SNIYA +W+D ++RR
Sbjct: 386 WRILLGACRVH---KNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRK 442
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
M+ R + K+PGCS IE++ VH F++GD HP EEI
Sbjct: 443 MRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEI 479
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 146/289 (50%), Gaps = 10/289 (3%)
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVK 181
N L D+ TY L+K C G ++Q + VH V S + + LI Y FG +
Sbjct: 10 NRLSADAITYSELIKCCLVRGAVQQARLVHEHVF-SNGYEPKTFLINTLINMYVKFGLLD 68
Query: 182 SAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
A+ LFD+M ++NVV+WT MI+ + + +D M GV N T SVL AC
Sbjct: 69 EARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACD 128
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
L + +H + K + + + +AL D Y+K G +AL VF ++ ++ WNS
Sbjct: 129 GLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNS 185
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
IIGG A + G+E + ++ +M+ + D TL +VL AC+ L+E G+++ ++
Sbjct: 186 IIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHV---L 242
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
K + ++ L+D+ C+ L++A + M E + + W +++ A
Sbjct: 243 KYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLA 291
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 156/326 (47%), Gaps = 28/326 (8%)
Query: 6 VPNSQLTHFTNSANSHKNSNTATKSHHHLPL----------------LQKCTHLVQFKQV 49
+P+ + +T +++ NSN K+ L L L+ C L+ +Q+
Sbjct: 77 MPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQL 136
Query: 50 HAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEA 109
H I+K ++ + LI++ + A VFN++I +N++I G+A+
Sbjct: 137 HGSILKVGLESDVFVRS---ALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQN 193
Query: 110 GLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHS 166
G + LY +M D T +L+AC L + + VH V+K D + ++++
Sbjct: 194 SDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKY-DQDLILNN 252
Query: 167 LTRLITFYCNFGDVKSAQLLFDQ-MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
L+ YC G ++ A LLF + MTEK+V++W+ MI G + + + LF M+ G
Sbjct: 253 --ALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKG 310
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNC-IILNDKLGAALTDMYAKCGYIEEA 284
+ N +T++ VL AC++ G G + + + ++ I + + D+ + G ++EA
Sbjct: 311 PKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEA 370
Query: 285 LR-VFKIVLEKNVCTWNSIIGGLAIH 309
++ + ++ E + TW ++G +H
Sbjct: 371 VKLIHEMNHEPDAVTWRILLGACRVH 396
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 168/460 (36%), Positives = 255/460 (55%), Gaps = 42/460 (9%)
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ-- 146
NQ + +T ++ + I G + ++ M G++P+ T+ LL CGD
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 147 --------------------------VKGVHSLVVKSK----------DFNSVIHSLTRL 170
+ G++S + K D NSV + +
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSV--TWNTM 146
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNE 230
I Y G V +A +FD+M E+++++WTAMING VK+ E + FR+M+ SGV+ +
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI 290
+ +++ L+AC NLGA G WVH +V N ++ +L D+Y +CG +E A +VF
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+ ++ V +WNS+I G A +G E++ F +MQ G KPD VT LTACSH GL+E+G
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
F M+ DY++ P ++HYGCLVDL RA L++A +++++MPM+PN V+ GSLL AC
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAAC- 385
Query: 411 SADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN 470
++ G N+ LAE M+ L L + NYV++SN+YAA +W+ A KMRR MK + K
Sbjct: 386 -SNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQ 444
Query: 471 PGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
PG S IEI+D +H FM GD H + I +LE ++ LR
Sbjct: 445 PGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLR 484
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 122/247 (49%), Gaps = 10/247 (4%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I+ + S Q+ A +F+++ ++ +I G+ + G + + +M +G+ PD
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205
Query: 131 SFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
L AC +L + VH V+ S+DF + + LI YC G V+ A+ +F
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVL-SQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
M ++ VV+W ++I G N E + FRKM++ G + + +T L+AC+++G E
Sbjct: 265 YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVE 324
Query: 248 LGKWVHEFVNKNC---IILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSII 303
G + F C I + L D+Y++ G +E+AL++ + + ++ N S++
Sbjct: 325 EG--LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLL 382
Query: 304 GGLAIHG 310
+ HG
Sbjct: 383 AACSNHG 389
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 94/248 (37%), Gaps = 59/248 (23%)
Query: 37 LQKCTHLVQFK---QVHAQIIKASFDNRT-ISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
L CT+L VH ++ F N +S++ LI+ + +A VF +
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNS----LIDLYCRCGCVEFARQVFYNME 268
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-KGVH 151
+ ++N+VI G+A G H + + +M G PD+ T+ L AC + V +G+
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 152 SLVVKSKDF--NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+ D+ + I L+ Y G ++ A L M K
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKP--------------- 373
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
NE+ + S+L+AC+N G N I+L ++L
Sbjct: 374 -------------------NEVVIGSLLAACSNHG--------------NNIVLAERLMK 400
Query: 270 ALTDMYAK 277
LTD+ K
Sbjct: 401 HLTDLNVK 408
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 277/506 (54%), Gaps = 42/506 (8%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L + + +++ ++VH +K ++ + L + +L ++ H VF+++
Sbjct: 37 LKSIGRLRKVIEGEKVHGYAVKTGLESDSYVCNSLMGMYAAL---GKMEITHKVFDEMPE 93
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDPDSFTYPILLKACGDLRQVK---G 149
++N +I Y G I ++ +M + L D T L AC L+ ++
Sbjct: 94 RDVVSWNGLISSYVGHGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKNLEIGER 153
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV-------------- 195
++ VV +F + + L+ +C G + A+ +FD M +KNV
Sbjct: 154 IYRYVVT--EFEMSVRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNG 211
Query: 196 -----------------VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
V WTAM+NG+V+ + E ++LFR M+ + + + LVS+L+
Sbjct: 212 RTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLT 271
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
CA GA E GKW+H ++ +N + ++ +G AL DMYAKCG IE AL VF + E++ +
Sbjct: 272 GCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDTAS 331
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
W S+I GLA +G A+ ++++M+ G++ DD+T +AVLTACSH G + +G+ IFY+M
Sbjct: 332 WTSLIYGLATNGMSGRALDLYYEMENVGVRLDDITFVAVLTACSHGGFVAEGRRIFYSMT 391
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
+K++P +HY CL+DLLCRA LLDEA E+I M E + L + ++A + NV
Sbjct: 392 ERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKMHGERDKTLVPVYCSLLSAARNYGNV 451
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
++AE E+L K+E + + L++++YA+ +W+D +RR MK+ I K PGCS IE+
Sbjct: 452 KIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEV 511
Query: 479 NDVVHEFMVGD--GRHPCSEEIYSML 502
+ V HEF+VG+ HP +EI SML
Sbjct: 512 DGVSHEFIVGNDPSSHPKMDEINSML 537
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 179/345 (51%), Gaps = 39/345 (11%)
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK 158
+++ AE+ + + L+ ++ G GL PD+FT P++LK+ G LR+V + VH VK+
Sbjct: 1 MLKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKT- 59
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
S + L+ Y G ++ +FD+M E++VV+W +I+ +V + + I +F
Sbjct: 60 GLESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVF 119
Query: 219 RKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
++M R+S ++ +E T+VS LSAC+ L E+G+ ++ +V ++ + G AL DM+ K
Sbjct: 120 QRMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTE-FEMSVRTGNALVDMFCK 178
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF----------WQMQMSG- 326
CG +++A +F + +KNV W S++ G +G +EA ++F W M+G
Sbjct: 179 CGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRTDEARELFERSPVKDVVLWTAMMNGY 238
Query: 327 --------------------IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
I+PD+ L+++LT C+ G +E+GK I + R+ +V +
Sbjct: 239 VQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGKWI-HGYIRENRVTVD 297
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
LVD+ + ++ A V M E + W SL+ A+
Sbjct: 298 KVVGTALVDMYAKCGCIETALGVFYEMK-ERDTASWTSLIYGLAT 341
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 134/269 (49%), Gaps = 12/269 (4%)
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
M+ + K++ + + LF ++R G+ + TL VL + L G+ VH + K
Sbjct: 1 MLKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTG 60
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ + + +L MYA G +E +VF + E++V +WN +I HG E+A+ +F
Sbjct: 61 LESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQ 120
Query: 321 QM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
+M + S +K D+ T+++ L+ACS +E G+ I+ + ++ E +V+ LVD+ C+
Sbjct: 121 RMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTEF--EMSVRTGNALVDMFCK 178
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGN- 438
LD+A + +M + N W S+++ S +G E E L + P D
Sbjct: 179 CGCLDKARAIFDSMR-DKNVKCWTSMVSGYVS--NGRTDEARE-----LFERSPVKDVVL 230
Query: 439 YVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
+ M N Y ++D+A ++ R M+ I
Sbjct: 231 WTAMMNGYVQFNRFDEALELFRCMQTARI 259
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 165/476 (34%), Positives = 270/476 (56%), Gaps = 13/476 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQ+H Q K F + L + QI+YA +VF+++ + + ++ ++I GY
Sbjct: 120 KQIHGQTFKYGFGSNVFVQNSLVSMYAKF---GQISYARIVFDKLHDRTVVSWTSIISGY 176
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKGVHSLVVK-SKDFNS 162
+ G + ++ +M + PD ++ A DL Q K +H LV K +F
Sbjct: 177 VQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEP 236
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
I + L T Y G V+ A+ F++M + N++ W AMI+G+ E I LFR+M
Sbjct: 237 DI--VISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMI 294
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
+ V+ +T+ S + A A +G+ EL +W+ +++K+ + + L DMYAKCG I
Sbjct: 295 TKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIY 354
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A VF V +K+V W+ +I G +HG G+EA+ ++ +M+ +G+ P+D T I +LTAC
Sbjct: 355 LARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACK 414
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
++GL+++G E+F+ M D+ +EP+ +HY C+VDLL RA L++AY+ I +MP++P +W
Sbjct: 415 NSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVW 473
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL+AC V L EIA E+L L+P+N G+YV +SN+YA+ W +R +M
Sbjct: 474 GALLSACKIH---RKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMM 530
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAARM 518
++ + K+ G S IEIN + F VGD HP S+EI+ L+ + L+ Y M
Sbjct: 531 TQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHM 586
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 167/310 (53%), Gaps = 9/310 (2%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
L QV+ Q+I + + K I + ++ + YAH F ++ P +N +
Sbjct: 15 LKHLDQVYVQLIVSGLHK---CRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAI 71
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG----VHSLVVKSK 158
I+GY + + I++Y M + + P+ FT+ +LKACG V+G +H K
Sbjct: 72 IKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGG-TSVEGIGKQIHGQTFKY- 129
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
F S + L++ Y FG + A+++FD++ ++ VV+WT++I+G+V+ + E +++F
Sbjct: 130 GFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVF 189
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
++MR V+ + + LVSV++A N+ GK +H V K + + +LT MYAK
Sbjct: 190 KEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKR 249
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G +E A F + + N+ WN++I G A +G GEEA+K+F +M I+ D +T+ + +
Sbjct: 250 GLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAV 309
Query: 339 TACSHAGLIE 348
A + G +E
Sbjct: 310 LASAQVGSLE 319
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G + A + F+ V E ++ WN+II G + ++M+ MQ+S + P+ T + VL
Sbjct: 48 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
AC + GK+I + Y NV LV + + + A ++ + +
Sbjct: 108 KACGGTSVEGIGKQI-HGQTFKYGFGSNVFVQNSLVSMYAKFGQISYA-RIVFDKLHDRT 165
Query: 399 AVLWGSLLTACASADD 414
V W S+++ D
Sbjct: 166 VVSWTSIISGYVQNGD 181
>gi|125541284|gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/343 (45%), Positives = 215/343 (62%), Gaps = 10/343 (2%)
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
+N+VI L R G V +A +FD M + V+WTA+I+G VK + E I+ FR
Sbjct: 139 YNTVISGLMR-------NGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAINCFR 191
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
M GVE + +TL++V+SACA +GA LG WVH V + + N ++ +L DMYA+CG
Sbjct: 192 AMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCG 251
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
+E A +VF + ++ V +WNS+I G A +G +AV+ F M+ G KPD VT VLT
Sbjct: 252 QVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLT 311
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSH GL ++G + MR +Y + ++HYGC+VDLL R+ L+EA V+ MPM PN
Sbjct: 312 ACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGRLEEAMRVVTTMPMRPNE 371
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
V+ G+LL C D V +AE M+ L++L+P D NYVL+SNIYAA +WD AGK+R
Sbjct: 372 VVLGALLAGCRMHGD---VGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDGAGKVR 428
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
LMK R + K PG S +EI+ VHEF+ GD HP +EEI ML
Sbjct: 429 SLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQML 471
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 7/281 (2%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTI-SDTQLAKLIESLVNSSQIAYAHLVFNQIINP 94
LL C F + FD + S +I L+ + +A A VF+ + P
Sbjct: 106 LLSTCLVRFYFASRLPHLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAP 165
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVH 151
++ +I G + G I + M+ +G++PD T ++ AC G L VH
Sbjct: 166 DKVSWTALIDGCVKNGRHDEAINCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVH 225
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
LVV+ + + LI Y G V+ A+ +F M ++ VV+W +MI G
Sbjct: 226 RLVVR-QGLERNVRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRC 284
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN-CIILNDKLGAA 270
+ ++ F MR G + + +T VL+AC++ G ++ G ++ + I +
Sbjct: 285 ADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGC 344
Query: 271 LTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSIIGGLAIHG 310
+ D+ + G +EEA+RV + + N +++ G +HG
Sbjct: 345 VVDLLGRSGRLEEAMRVVTTMPMRPNEVVLGALLAGCRMHG 385
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 110/254 (43%), Gaps = 38/254 (14%)
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMR--DSGVEVNELTLVSVLSACANLGASELGKW 251
+V +WT+ I KQ + M + N++TL++VLSACA+ +S L +
Sbjct: 29 DVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACADSPSSPLARR 88
Query: 252 VHEFVNKNCIILNDK---LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA- 307
+ V+ + L L L Y AL++F + ++ T+N++I GL
Sbjct: 89 LALSVHARVLKLFPSHLLLSTCLVRFYFASRLPHLALQLFDAMPVRSAVTYNTVISGLMR 148
Query: 308 -------------------------IHGC-----GEEAVKMFWQMQMSGIKPDDVTLIAV 337
I GC +EA+ F M + G++PD VTLIAV
Sbjct: 149 NGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAINCFRAMLLDGVEPDYVTLIAV 208
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
++AC+ G + G + + R +E NV+ L+D+ R ++ A +V M +
Sbjct: 209 ISACAEVGALGLGMWVHRLVVRQ-GLERNVRIANSLIDMYARCGQVELARQVFSGM-RKR 266
Query: 398 NAVLWGSLLTACAS 411
V W S++ A+
Sbjct: 267 TVVSWNSMIVGFAA 280
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 271/474 (57%), Gaps = 11/474 (2%)
Query: 42 HLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
+L+ K++HA IK FD+ + L I+ ++Y F+ + + ++ T
Sbjct: 276 YLLNGKEIHAYAIKNGFDSNILVGNTL---IDMYAKCCCMSYGGRAFDLMAHKDLISWTT 332
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR---QVKGVHSLVVKSK 158
GYA+ + ++L Q+ G+D D+ +L AC L ++K +H ++
Sbjct: 333 AAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGG 392
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
+ V+ + +I Y G + A +F+ + K+VV+WT+MI+ +V + +++F
Sbjct: 393 LSDPVLQN--TIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVF 450
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
M+++G+E + +TLVS+LSA +L + GK +H F+ + IL + L DMYA+C
Sbjct: 451 SSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARC 510
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G +E+A ++F +N+ W ++I +HG GE AV++F +M+ I PD +T +A+L
Sbjct: 511 GSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALL 570
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
ACSH+GL+ +GK M+ +Y++EP +HY CLVDLL R L+EAY+++++M EP
Sbjct: 571 YACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPT 630
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
+W +LL AC +N E+ E+A E+L++L+ N GNYVL+SN++AA +W D ++
Sbjct: 631 PEVWCALLGACRIH---SNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEV 687
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
R MK + KNPGCS IE+ + +H F+ D HP ++IY L V L+ E
Sbjct: 688 RMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKRE 741
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 182/365 (49%), Gaps = 42/365 (11%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG- 142
A ++F+++ S F +N ++ GY G +++Y +M G+ DS+T+P+LLKACG
Sbjct: 11 AEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGI 70
Query: 143 --DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN-VVTWT 199
DL +H L +K +S + + L+ Y D+ A+ LFD+M +N VV+W
Sbjct: 71 VEDLFCGAEIHGLAIK-YGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWN 129
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
++I+ + E + LF +M +GV N T + L AC + +LG +H + K+
Sbjct: 130 SIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKS 189
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+L+ + AL MY + G + EA +F + K++ TWNS++ G +G EA++ F
Sbjct: 190 GRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFF 249
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLC 378
+ +Q + +KPD V++I+++ A G + GKEI Y ++ + + N+ L+D+
Sbjct: 250 YDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGF--DSNILVGNTLIDMYA 307
Query: 379 R-------ARLLD------------------------EAYEVIRNMPMEP---NAVLWGS 404
+ R D +A E++R + ME +A + GS
Sbjct: 308 KCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGS 367
Query: 405 LLTAC 409
+L AC
Sbjct: 368 ILLAC 372
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 210/425 (49%), Gaps = 20/425 (4%)
Query: 32 HHLPLLQKCTHLVQ----FKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLV 87
+ P+L K +V+ ++H IK D+ L L + I A +
Sbjct: 59 YTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVAL---YAKCNDINGARKL 115
Query: 88 FNQI-INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
F+++ + ++N++I Y+ G+ + L+++M+ G+ +++T+ L+AC D
Sbjct: 116 FDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSF 175
Query: 147 VK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
+K +H+ ++KS V + L+ Y FG + A ++F + K++VTW +M+
Sbjct: 176 IKLGMQIHAAILKSGRVLDV-YVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLT 234
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
G ++ Y E ++ F ++++ ++ ++++++S++ A LG GK +H + KN
Sbjct: 235 GFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDS 294
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
N +G L DMYAKC + R F ++ K++ +W + G A + C +A+++ Q+Q
Sbjct: 295 NILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQ 354
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
M G+ D + ++L AC + K KEI R +P +++ ++D+ ++
Sbjct: 355 MEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGII 412
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
D A + ++ + + V W S+++ C + AN L + + LEP +YV +
Sbjct: 413 DYAVRIFESIECK-DVVSWTSMIS-CYVHNGLANKALEVFSSMKETGLEP----DYVTLV 466
Query: 444 NIYAA 448
+I +A
Sbjct: 467 SILSA 471
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 13/241 (5%)
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y G V A+++FD+M+E+++ TW AM+ G+V ++++R+MR GV + T
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 234 VSVLSACANLGASELGKWVHEFVNK-NC----IILNDKLGAALTDMYAKCGYIEEALRVF 288
+L AC + G +H K C ++N +L +YAKC I A ++F
Sbjct: 62 PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVN-----SLVALYAKCNDINGARKLF 116
Query: 289 -KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
++ + +V +WNSII + +G EA+ +F +M +G+ + T A L AC + I
Sbjct: 117 DRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFI 176
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
+ G +I + + +V +V LV + R + EA + N+ + + V W S+LT
Sbjct: 177 KLGMQIHAAILKSGRV-LDVYVANALVAMYVRFGKMPEAAVIFGNLEGK-DIVTWNSMLT 234
Query: 408 A 408
Sbjct: 235 G 235
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 274 MYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVT 333
MY KCG + +A +F + E+++ TWN+++GG +G A++M+ +M+ G+ D T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 334 LIAVLTACSHAGLIEK---GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+L AC G++E G EI + + Y + V LV L + ++ A ++
Sbjct: 61 FPVLLKAC---GIVEDLFCGAEI-HGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLF 116
Query: 391 RNMPMEPNAVLWGSLLTA 408
M + + V W S+++A
Sbjct: 117 DRMYVRNDVVSWNSIISA 134
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 162/437 (37%), Positives = 266/437 (60%), Gaps = 11/437 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKAC- 141
A VF+ I ++N +++ Y G+ +++ M+ G + P+ T ++L AC
Sbjct: 206 ARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACR 265
Query: 142 --GDLRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
GDL + V ++ + +S++ S L+ Y G++ A+ +FD + +K++V W
Sbjct: 266 DQGDLVLGRWVEEWSWSARMEMDSLVGSA--LLGMYEKCGEIAEARRVFDTIIDKDIVAW 323
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
AMI G+ + E I LF MR +G+ +++TL VLSAC+ +GA ELG + + ++
Sbjct: 324 NAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASR 383
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+ N +G AL DMYAKCG +++A+ VF+ + KNV +WN++I GLA +G G+EA++
Sbjct: 384 RGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQH 443
Query: 319 FWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL 377
F M+ G+KPDD+T I VL+AC HAGL++ GK F ++ ++++ P ++HY C+VDLL
Sbjct: 444 FQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLL 503
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDG 437
R+ L+EA++ I +P + +AV+ G+LL AC NVE+ E + R+I+LEP N
Sbjct: 504 ARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCK---NVEIGERVINRIIQLEPTNSW 560
Query: 438 NYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEE 497
NYV+ S IYA+ + DD+ KMR LM+ER + K PGCS +E++ V EF GD +++
Sbjct: 561 NYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGCSWVEVSGKVLEFYAGDEPQHGADD 620
Query: 498 IYSMLEYVAISLREECY 514
+Y +L+ + +R E Y
Sbjct: 621 MYQVLDLLVDEMRLEGY 637
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 209/397 (52%), Gaps = 14/397 (3%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQII-KASFDNRTISDTQLAKLIESLVNSSQI 81
+S AT S+ LL KC L KQ+HA ++ +ASF L+ S +S+
Sbjct: 41 SSPAATASYLASNLLPKCRSLAAVKQLHAHLLHRASFPYNHFLSKLLSLFTSSSSSSAAA 100
Query: 82 AYAHLVFNQIIN---PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
A + + + P+ F++N IR +A + H ++L+ M+ + + PDS+T P LL
Sbjct: 101 AASDYALLLLASHSAPTAFSYNVAIRFFASS-RPHTSLRLFLHMLRSAIRPDSYTLPFLL 159
Query: 139 KACGDLRQ---VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
A + H+L+ K N H++ LIT Y D +A+ +FD + ++V
Sbjct: 160 LAAARYPAPSLARAAHALLGKI-GLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDV 218
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSG-VEVNELTLVSVLSACANLGASELGKWVHE 254
V+W AM+ + + E +FR M G V N +T+ VL+AC + G LG+WV E
Sbjct: 219 VSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEE 278
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+ + ++ +G+AL MY KCG I EA RVF +++K++ WN++I G A +G E
Sbjct: 279 WSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNE 338
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYGCL 373
A+ +F M+++G++PD +TL VL+ACS G +E G E+ Y RR + NV L
Sbjct: 339 AISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRG--LYSNVYVGTAL 396
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
VD+ + LD+A EV R MP + N W +L+ A
Sbjct: 397 VDMYAKCGDLDKAIEVFRKMPCK-NVASWNALICGLA 432
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 118/236 (50%), Gaps = 13/236 (5%)
Query: 72 IESLVNSS---------QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
++SLV S+ +IA A VF+ II+ A+N +I GYA+ G+ + I L+ M
Sbjct: 287 MDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSM 346
Query: 123 IGNGLDPDSFTYPILLKACGDLRQVKGVHSL--VVKSKDFNSVIHSLTRLITFYCNFGDV 180
G+ PD T +L AC + ++ L + S ++ T L+ Y GD+
Sbjct: 347 RIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDL 406
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR-DSGVEVNELTLVSVLSA 239
A +F +M KNV +W A+I G E I F+ MR + G++ +++T + VLSA
Sbjct: 407 DKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSA 466
Query: 240 CANLGASELGK-WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
C + G + GK W + + II + + + D+ A+ G++EEA + + +K
Sbjct: 467 CVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDK 522
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/434 (35%), Positives = 262/434 (60%), Gaps = 7/434 (1%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
AH VF+ ++ +++T+I GY++ L +LY MI GL ++ +L A G
Sbjct: 287 AHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGK 346
Query: 144 L---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
L +Q K +H+ V+K + V+ + LI Y N G +K A+ +F+ ++K+++ W +
Sbjct: 347 LELLKQGKEMHNFVLKEGLMSDVVVG-SALIVMYANCGSIKEAESIFECTSDKDIMVWNS 405
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
MI G+ ++ FR++ + N +T+VS+L C +GA GK +H +V K+
Sbjct: 406 MIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSG 465
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ LN +G +L DMY+KCG++E +VFK ++ +NV T+N++I HG GE+ + +
Sbjct: 466 LGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYE 525
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
QM+ G +P+ VT I++L+ACSHAGL+++G ++ +M DY +EPN++HY C+VDL+ RA
Sbjct: 526 QMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRA 585
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
LD AY+ I MPM P+A ++GSLL AC + VEL E+ ER+++L+ + G+YV
Sbjct: 586 GDLDGAYKFITRMPMTPDANVFGSLLGACRLHN---KVELTELLAERILQLKADDSGHYV 642
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYS 500
L+SN+YA+ +W+D K+R ++K++ + K PG S I++ ++ F HP +I
Sbjct: 643 LLSNLYASGKRWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATSAFHPAFAKIEE 702
Query: 501 MLEYVAISLREECY 514
L + + ++ E Y
Sbjct: 703 TLNSLLLVMKSEDY 716
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 180/356 (50%), Gaps = 18/356 (5%)
Query: 14 FTNSANSHKNSN--TATKSHHHLPL---------LQKCTHLVQFKQVHAQIIKASFDNRT 62
F N+H + T T+ H LP+ L+ +L + + +HA ++ F T
Sbjct: 3 FGTKVNAHAIAMLITFTRQQHSLPIHFTVTSFHRLKSPPNLHEARTLHALLLVLGFFQPT 62
Query: 63 I--SDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYT 120
S + ++L+ VN + +A L F + + A+N ++RG G + I Y
Sbjct: 63 CPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYH 122
Query: 121 QMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNF 177
M+ +G+ PD++TYP++LKAC L + + VH + N ++ +I +
Sbjct: 123 SMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHETMHGKTKAN--VYVQCAVIDMFAKC 180
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
G V+ A+ +F++M ++++ +WTA+I G + E + LFRKMR G+ + + + S+L
Sbjct: 181 GSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASIL 240
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
AC L A +LG + ++ + + A+ DMY KCG EA RVF ++ +V
Sbjct: 241 PACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVV 300
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
+W+++I G + + +E+ K++ M G+ + + +VL A L+++GKE+
Sbjct: 301 SWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEM 356
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 200/421 (47%), Gaps = 13/421 (3%)
Query: 1 MLKQLVPNSQLT---HFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKAS 57
+L+ LV T HF +S H T ++ PL+ K + Q+ + + +
Sbjct: 104 ILRGLVAVGHFTKAIHFYHSMLQHG----VTPDNYTYPLVLKACSSLHALQL-GRWVHET 158
Query: 58 FDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
+T ++ + +I+ + A +F ++ + ++ +I G G +
Sbjct: 159 MHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEAL 218
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKS--KDFNSVIHSLTRLITFY 174
L+ +M GL PDS +L ACG L VK +L V + F S ++ +I Y
Sbjct: 219 LLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMY 278
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
C GD A +F M +VV+W+ +I G+ + Y+E L+ M + G+ N +
Sbjct: 279 CKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVAT 338
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
SVL A L + GK +H FV K ++ + +G+AL MYA CG I+EA +F+ +K
Sbjct: 339 SVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDK 398
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
++ WNS+I G + G E A F ++ + +P+ +T++++L C+ G + +GKEI
Sbjct: 399 DIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIH 458
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
+ + + NV L+D+ + L+ +V + M M N + ++++AC S
Sbjct: 459 GYVTKS-GLGLNVSVGNSLIDMYSKCGFLELGEKVFKQM-MVRNVTTYNTMISACGSHGQ 516
Query: 415 G 415
G
Sbjct: 517 G 517
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 145/275 (52%), Gaps = 7/275 (2%)
Query: 138 LKACGDLRQVKGVHSLVVKSKDFNSVI-HS---LTRLITFYCNFGDVKSAQLLFDQMTEK 193
LK+ +L + + +H+L++ F HS ++L+ Y NFG ++ A L F + K
Sbjct: 37 LKSPPNLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHK 96
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
++ W A++ G V ++ + I + M GV + T VL AC++L A +LG+WVH
Sbjct: 97 PIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVH 156
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
E ++ N + A+ DM+AKCG +E+A R+F+ + ++++ +W ++I G +G
Sbjct: 157 ETMHGKTKA-NVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECL 215
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCL 373
EA+ +F +M+ G+ PD V + ++L AC ++ G + R E ++ +
Sbjct: 216 EALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRS-GFESDLYVSNAV 274
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+D+ C+ EA+ V +M + + V W +L+
Sbjct: 275 IDMYCKCGDPLEAHRVFSHM-VYSDVVSWSTLIAG 308
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 173/469 (36%), Positives = 258/469 (55%), Gaps = 39/469 (8%)
Query: 78 SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPIL 137
SSQI L NQ + +T ++ + I + G + ++ M G++P+ T+ L
Sbjct: 13 SSQIQRI-LKLNQSTSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIAL 71
Query: 138 LKACGDLRQ-----------------------VKGVHSLVVKSK-----------DFNSV 163
L CGD+ + G L + SK DF
Sbjct: 72 LSGCGDVSSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMED 131
Query: 164 IHSLT--RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
+S+T +I Y G V +A LFD+M E+++++WTAMING VK+ + E + FR+M
Sbjct: 132 KNSVTWNTMIDGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREM 191
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
+ SGV+ + + +++ L+AC +LGA G WVH +V N ++ +L D+Y +CG +
Sbjct: 192 QISGVKPDYVAIIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCV 251
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
E A VF + ++ V +WNS+I G A +G E++ F +MQ G KPD VT LTAC
Sbjct: 252 EFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTAC 311
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SH GL+E+G F M+RD+++ P ++HYGCLVDL RA L++A V+++MPM+PN V+
Sbjct: 312 SHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVV 371
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
GSLL AC + G N LAE ++ L L + NYV++SN+YAA W+ A KMRR
Sbjct: 372 IGSLLAAC--RNHGNNTVLAERLVKHLSDLNVKSHSNYVILSNMYAADGIWEGASKMRRK 429
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
MK + K PG S +EI+D H FM GD H + I +LE ++ LR
Sbjct: 430 MKGLGLKKQPGFSSVEIDDCTHVFMAGDSAHVETAYIREVLELISSDLR 478
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 173/486 (35%), Positives = 272/486 (55%), Gaps = 29/486 (5%)
Query: 43 LVQFKQVHAQIIKASFDNRTI---------SDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L++ +Q+HA IIK+ + S TQL L SSQ VF +
Sbjct: 70 LLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLL------SSQ------VFEESER 117
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGV 150
S+ +++VI +A+ IQ + +MIG L PD +P KAC L + K V
Sbjct: 118 KSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSV 177
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H LV+K+ ++ + + L+ Y GD+K A+ +FD+M +NVV+W+ MI G+ +
Sbjct: 178 HCLVIKT-GYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGE 236
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
+ E + LF++ G++VN+ TL SV+ C + ELGK +H K L+ +G++
Sbjct: 237 HEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSS 296
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L +Y+KCG IE A RVF V KN+ WN+++ A H +EA +F +M+ +G++P+
Sbjct: 297 LISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPN 356
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+T + VL ACSHAGL+E+GK+ F M++ Y++EP +HY +VDLL RA L EA VI
Sbjct: 357 FITFLCVLYACSHAGLVEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQEALSVI 415
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+ MP EP +WG+ +T C N +LA A +++ +L + G +V++SN YAA
Sbjct: 416 KGMPTEPTESVWGAFITGCRIH---GNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAG 472
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+++DA K R+++++R + K G S IE + VH+F GD H +EIY LE + +
Sbjct: 473 RYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEME 532
Query: 511 EECYAA 516
Y A
Sbjct: 533 RAGYVA 538
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 277/506 (54%), Gaps = 42/506 (8%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L + + +++ ++VH +KA + + L + SL +I H VF+++
Sbjct: 53 LKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASL---GKIEITHKVFDEMPQ 109
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKACGDLRQVK---G 149
++N +I Y G I ++ +M + L D T L AC L+ ++
Sbjct: 110 RDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGER 169
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV-------------- 195
++ VV +F + L+ +C G + A+ +FD M +KNV
Sbjct: 170 IYRFVVT--EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTG 227
Query: 196 -----------------VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
V WTAM+NG+V+ + E ++LFR M+ +G+ + LVS+L+
Sbjct: 228 RIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLT 287
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
CA GA E GKW+H ++N+N + ++ +G AL DMYAKCG IE AL VF + E++ +
Sbjct: 288 GCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTAS 347
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
W S+I GLA++G A+ ++++M+ G++ D +T +AVLTAC+H G + +G++IF++M
Sbjct: 348 WTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMT 407
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
+ V+P +H CL+DLLCRA LLDEA E+I M E + L + ++A + NV
Sbjct: 408 ERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNV 467
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
++AE E+L K+E + + L++++YA+ +W+D +RR MK+ I K PGCS IEI
Sbjct: 468 KIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEI 527
Query: 479 NDVVHEFMVGDG--RHPCSEEIYSML 502
+ V HEF+VGD HP +EI SML
Sbjct: 528 DGVGHEFIVGDDLLSHPKMDEINSML 553
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 187/354 (52%), Gaps = 41/354 (11%)
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
PS +N +++ A+ + + L+ ++ G GL PD+FT P++LK+ G LR+V +
Sbjct: 8 TPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 150 VHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
VH VK+ +F+S + + L+ Y + G ++ +FD+M +++VV+W +I+ +V
Sbjct: 68 VHGYAVKAGLEFDSYVSN--SLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 209 KNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
+ + I +F++M ++S ++ +E T+VS LSAC+ L E+G+ ++ FV ++ ++
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRI 184
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG----------------- 310
G AL DM+ KCG +++A VF + +KNV W S++ G G
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 311 --------------CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN 356
+EA+++F MQ +GI+PD+ L+++LT C+ G +E+GK I +
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWI-HG 303
Query: 357 MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ +V + LVD+ + ++ A EV + E + W SL+ A
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLA 356
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 136/276 (49%), Gaps = 12/276 (4%)
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
+++ + M+ K++ + + LF ++R G+ + TL VL + L G+ VH
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
+ K + + + +L MYA G IE +VF + +++V +WN +I +G E
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 314 EAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC 372
+A+ +F +M Q S +K D+ T+++ L+ACS +E G+ I+ + ++ E +V+
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEF--EMSVRIGNA 187
Query: 373 LVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLE 432
LVD+ C+ LD+A V +M + N W S++ S ++ A + ER
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMR-DKNVKCWTSMVFGYVST---GRIDEARVLFER----S 239
Query: 433 PFNDGN-YVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
P D + M N Y ++D+A ++ R M+ I
Sbjct: 240 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGI 275
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 162/437 (37%), Positives = 266/437 (60%), Gaps = 11/437 (2%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKAC- 141
A VF+ I ++N +++ Y G+ +++ M+ G + P+ T ++L AC
Sbjct: 206 ARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACR 265
Query: 142 --GDLRQVKGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
GDL + V ++ + +S++ S L+ Y G++ A+ +FD + +K++V W
Sbjct: 266 DQGDLVLGRWVEEWSWSARMEMDSLVGSA--LLGMYEKCGEIAEARRVFDTIIDKDIVAW 323
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
AMI G+ + E I LF MR +G+ +++TL VLSAC+ +GA ELG + + ++
Sbjct: 324 NAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASR 383
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
+ N +G AL DMYAKCG +++A+ VF+ + KNV +WN++I GLA +G G+EA++
Sbjct: 384 RGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQH 443
Query: 319 FWQMQ-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL 377
F M+ G+KPDD+T I VL+AC HAGL++ GK F ++ ++++ P ++HY C+VDLL
Sbjct: 444 FQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLL 503
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDG 437
R+ L+EA++ I +P + +AV+ G+LL AC NVE+ E + R+I+LEP N
Sbjct: 504 ARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCK---NVEIGERVINRIIQLEPTNSW 560
Query: 438 NYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEE 497
NYV+ S IYA+ + DD+ KMR LM+ER + K PGCS +E++ V EF GD +++
Sbjct: 561 NYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGCSWVEVSGKVLEFYAGDEPQHGADD 620
Query: 498 IYSMLEYVAISLREECY 514
+Y +L+ + +R E Y
Sbjct: 621 MYQVLDLLVDEMRLEGY 637
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 209/397 (52%), Gaps = 14/397 (3%)
Query: 23 NSNTATKSHHHLPLLQKCTHLVQFKQVHAQII-KASFDNRTISDTQLAKLIESLVNSSQI 81
+S AT S+ LL KC L KQ+HA ++ +ASF L+ S +S+
Sbjct: 41 SSPAATASYLASNLLPKCRSLAAVKQLHAHLLHRASFPYNHFLSKLLSLFTSSSSSSAAA 100
Query: 82 AYAHLVFNQIIN---PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
A + + + P+ F++N IR +A + H ++L+ M+ + + PDS+T P LL
Sbjct: 101 AASDYALLLLASHSAPTAFSYNVAIRFFASS-RPHTSLRLFLHMLRSAIRPDSYTLPFLL 159
Query: 139 KACGDLRQ---VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
A + H+L+ K N H++ LIT Y D +A+ +FD + ++V
Sbjct: 160 LAAARYPAPSLARAAHALLGKI-GLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDV 218
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSG-VEVNELTLVSVLSACANLGASELGKWVHE 254
V+W AM+ + + E +FR M G V N +T+ VL+AC + G LG+WV E
Sbjct: 219 VSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEE 278
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
+ + ++ +G+AL MY KCG I EA RVF +++K++ WN++I G A +G E
Sbjct: 279 WSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNE 338
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYGCL 373
A+ +F M+++G++PD +TL VL+ACS G +E G E+ Y RR + NV L
Sbjct: 339 AISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRG--LYSNVYVGTAL 396
Query: 374 VDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
VD+ + LD+A EV R MP + N W +L+ A
Sbjct: 397 VDMYAKCGDLDKAIEVFRKMPCK-NVASWNALICGLA 432
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 118/236 (50%), Gaps = 13/236 (5%)
Query: 72 IESLVNSS---------QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
++SLV S+ +IA A VF+ II+ A+N +I GYA+ G+ + I L+ M
Sbjct: 287 MDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSM 346
Query: 123 IGNGLDPDSFTYPILLKACGDLRQVKGVHSL--VVKSKDFNSVIHSLTRLITFYCNFGDV 180
G+ PD T +L AC + ++ L + S ++ T L+ Y GD+
Sbjct: 347 RIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDL 406
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR-DSGVEVNELTLVSVLSA 239
A +F +M KNV +W A+I G E I F+ MR + G++ +++T + VLSA
Sbjct: 407 DKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSA 466
Query: 240 CANLGASELGK-WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
C + G + GK W + + II + + + D+ A+ G++EEA + + +K
Sbjct: 467 CVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDK 522
>gi|10086462|gb|AAG12522.1|AC015446_3 Hypothetical Protein [Arabidopsis thaliana]
Length = 539
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 274/492 (55%), Gaps = 20/492 (4%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
++QKC Q KQ+ + + A + ++L + ++ +++A +F I P
Sbjct: 9 MIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERC-AISPFGDLSFAVQIFRYIPKPL 67
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP------DSFTYPILLKACGDLRQVKG 149
T +N +IRG+A + Y M+ D+ T LKAC
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 150 VHSLVVKSKDFNSVIHSL--TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ L + SL T L+ Y GD+ SA LFD+M ++V +W A+I G V
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV-HEFVNKNCIILNDK 266
E ++L+++M G+ +E+T+V+ L AC++LG + G+ + H + N N I+ N
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSN-- 245
Query: 267 LGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
A DMY+KCG++++A +VF + +K+V TWN++I G A+HG A+++F +++ +
Sbjct: 246 ---AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDN 302
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
GIKPDDV+ +A LTAC HAGL+E G +F NM VE N+KHYGC+VDLL RA L E
Sbjct: 303 GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLRE 361
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
A+++I +M M P+ VLW SLL A D VE+AEIA + ++ NDG++VL+SN+
Sbjct: 362 AHDIICSMSMIPDPVLWQSLLGASEIYSD---VEMAEIASREIKEMGVNNDGDFVLLSNV 418
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
YAA+ +W D G++R M+ + + K PG S IE +HEF D H EIY ++ +
Sbjct: 419 YAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEI 478
Query: 506 AISLREECYAAR 517
+RE+ Y A+
Sbjct: 479 RFKIREDGYVAQ 490
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 184/558 (32%), Positives = 288/558 (51%), Gaps = 56/558 (10%)
Query: 2 LKQLVPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNR 61
L+ L P QL F ++ +S A+ H + KC ++ +++ FD
Sbjct: 117 LRALDPGQQLHAFAAASGFLTDSIVASSLTH---MYLKCDRILDARKL--------FDRM 165
Query: 62 TISDTQL-AKLIESLVNSSQIAYAHLVFNQI----INPSTFAFNTVIRGYAEAGLGHRGI 116
D + + +I + A +F ++ + P+ ++N ++ G+ G +
Sbjct: 166 PDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAV 225
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVK----------------- 156
++ M+ G PD T +L A G L V VH V+K
Sbjct: 226 GMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMY 285
Query: 157 ---------SKDFNSV----IHSLTRLITFYCNFGDVKSAQLLF----DQMTEKNVVTWT 199
S+ F+ V I SL +T G V +A +F DQ E NVVTWT
Sbjct: 286 GKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWT 345
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
++I + E ++LFR M+ GVE N +T+ S++ AC N+ A GK +H F +
Sbjct: 346 SIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRR 405
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
I + +G+AL DMYAKCG I+ A R F + N+ +WN+++ G A+HG +E ++MF
Sbjct: 406 GIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMF 465
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
M SG KPD VT VL+AC+ GL E+G + +M ++ +EP ++HY CLV LL R
Sbjct: 466 HMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSR 525
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
L+EAY +I+ MP EP+A +WG+LL++C + N+ L EIA E+L LEP N GNY
Sbjct: 526 VGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHN---NLSLGEIAAEKLFFLEPTNPGNY 582
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
+L+SNIYA+K WD+ ++R +MK + + KNPG S IE+ VH + GD HP ++I
Sbjct: 583 ILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDIL 642
Query: 500 SMLEYVAISLREECYAAR 517
L+ + + +++ Y +
Sbjct: 643 EKLDKLNMQMKKSGYLPK 660
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 173/395 (43%), Gaps = 83/395 (21%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVF---NQIINPSTFA 98
L Q +Q HA I++ + SDTQL L+ N+ ++ L + + +P+ F+
Sbjct: 16 LSQARQAHALILRLNL----FSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFS 71
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVV 155
F+++I +A + + ++ + L PD+F P +K+C LR + + +H+
Sbjct: 72 FSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAA 131
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
S I + + L Y + A+ LFD+M +++VV W+AMI G+ + E
Sbjct: 132 ASGFLTDSIVA-SSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAK 190
Query: 216 DLFRKMRDSGVEVNEL-----------------------------------TLVSVLSAC 240
+LF +MR GVE N + T+ VL A
Sbjct: 191 ELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAV 250
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV--------- 291
L +G VH +V K + + + +A+ DMY KCG ++E RVF V
Sbjct: 251 GCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLN 310
Query: 292 --------------------------LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
+E NV TW SII + +G EA+++F MQ
Sbjct: 311 AFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAY 370
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRR 359
G++P+ VT+ +++ AC + + GKEI +++RR
Sbjct: 371 GVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRR 405
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 113/224 (50%), Gaps = 4/224 (1%)
Query: 137 LLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL---LFDQMTEK 193
L + L Q + H+L+++ F+ T L++FY N + + QL L +
Sbjct: 9 LSSSTASLSQARQAHALILRLNLFSDT-QLTTSLLSFYANALSLSTPQLSLTLSSHLPHP 67
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
+ +++++I+ + ++ + F + + + L S + +CA+L A + G+ +H
Sbjct: 68 TLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLH 127
Query: 254 EFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
F + + + + ++LT MY KC I +A ++F + +++V W+++I G + G E
Sbjct: 128 AFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVE 187
Query: 314 EAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
EA ++F +M+ G++P+ V+ +L + G ++ +F M
Sbjct: 188 EAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMM 231
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 159/472 (33%), Positives = 271/472 (57%), Gaps = 10/472 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP L ++VHA ++ FD + T +++ + A VF+ + +
Sbjct: 334 LPACADAQALGACREVHAFAVRGGFDEQVNVST---AILDVYCKCGAVDSARKVFDGMQD 390
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGV 150
++ ++N +I+GYAE G + L+ +M+G G+D + L ACG+L + + V
Sbjct: 391 RNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRV 450
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKN 210
H L+V+ S ++ + LIT YC A +FD++ K V+W AMI G + +
Sbjct: 451 HELLVRI-GLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGS 509
Query: 211 YREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
+ + LF +M+ V+ + TLVS++ A A++ +W+H + + + + + A
Sbjct: 510 SEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTA 569
Query: 271 LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPD 330
L DMYAKCG + A +F +++V TWN++I G HG G+ AV++F +M+ SG P+
Sbjct: 570 LIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPN 629
Query: 331 DVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVI 390
+ T ++VL+ACSHAGL+++G+E F +M+ DY +EP ++HYG +VDLL RA L EA+ I
Sbjct: 630 ETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFI 689
Query: 391 RNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKA 450
+ MPMEP ++G++L AC NVELAE + +R+ +LEP +VL++NIYA +
Sbjct: 690 QKMPMEPGISVYGAMLGACKLHK---NVELAEESAQRIFELEPEEGVYHVLLANIYANAS 746
Query: 451 QWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
W D ++R M+++ + K PG S++++ + +H F G H +++IY+ L
Sbjct: 747 LWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARL 798
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 164/312 (52%), Gaps = 11/312 (3%)
Query: 36 LLQKCT---HLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL+ C L + VHAQ+ ++ T LA + + A VF+++
Sbjct: 231 LLKLCAARADLATGRAVHAQLAARGLSPEALAATALANM---YAKCRRPGDARRVFDRMP 287
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDPDSFTYPILLKACGD---LRQVK 148
A+N ++ GYA GL + + +M +G PD+ T +L AC D L +
Sbjct: 288 ARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACR 347
Query: 149 GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
VH+ V+ F+ ++ T ++ YC G V SA+ +FD M ++N V+W AMI G+ +
Sbjct: 348 EVHAFAVRG-GFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN 406
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ E + LF++M GV+V ++++++ L AC LG + G+ VHE + + + N +
Sbjct: 407 GDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVM 466
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
AL MY KC + A +VF + K +WN++I G +G E+AV++F +MQ+ +K
Sbjct: 467 NALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVK 526
Query: 329 PDDVTLIAVLTA 340
PD TL++++ A
Sbjct: 527 PDSFTLVSIIPA 538
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 160/331 (48%), Gaps = 17/331 (5%)
Query: 124 GNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDV 180
+G P T+ LLK C DL + VH+ + ++ + + T L Y
Sbjct: 218 ASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLA-ARGLSPEALAATALANMYAKCRRP 276
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS-GVEVNELTLVSVLSA 239
A+ +FD+M ++ V W A++ G+ + + + +M++ G + +TLVSVL A
Sbjct: 277 GDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPA 336
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
CA+ A + VH F + + A+ D+Y KCG ++ A +VF + ++N +W
Sbjct: 337 CADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSW 396
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR 359
N++I G A +G EA+ +F +M G+ DV+++A L AC G +++G+ + + R
Sbjct: 397 NAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVR 456
Query: 360 DYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC---ASADDGA 416
+E NV L+ + C+ + D A +V + + V W +++ C S++D
Sbjct: 457 -IGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTR-VSWNAMILGCTQNGSSEDA- 513
Query: 417 NVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
+ + ++LE ++ L+S I A
Sbjct: 514 ------VRLFSRMQLENVKPDSFTLVSIIPA 538
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 268/479 (55%), Gaps = 18/479 (3%)
Query: 49 VHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
VH +++ + D D LA KLI + + +A VF++ + F +N + R A
Sbjct: 96 VHHRLVGSGLDQ----DPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALA 151
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-------GDLRQVKGVHSLVVKSKDF 160
A G + LY QM G+ + FTY +LKAC LR+ K +H+ +++ +
Sbjct: 152 MASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILR-HGY 210
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
+H +T L+ Y FG V A +F M +KN+V+W+AMI + K + + ++LF+
Sbjct: 211 EGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQI 270
Query: 221 MRDSGVEV--NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
M + N +T+VSVL ACA+L A E GK VH +V + + + L MY +C
Sbjct: 271 MMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRC 330
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G I RVF + +++V +WNS+I +HG G++A+++F M G+ P +T I VL
Sbjct: 331 GEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVL 390
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
ACSHAGL+E+ K +F +M Y++ P ++HY C+VD+L RA LDEA E+I+NM +P
Sbjct: 391 CACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPG 450
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
+WGSLL +C NVELAE A L +LEP N GNYVL+S+IYA W+D ++
Sbjct: 451 PTVWGSLLGSCRIH---CNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRV 507
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAAR 517
R+ ++ R + K P CS IE+ ++ + + +P EE+ + L + ++ + Y +
Sbjct: 508 RKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQ 566
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 182/445 (40%), Gaps = 85/445 (19%)
Query: 56 ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRG 115
+ + + I LI+SL + A + NP+ F +I E G
Sbjct: 34 SGYPTKDIKSNNNDDLIQSLCRGGNLKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSDG 93
Query: 116 IQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYC 175
+ ++ +++G+GLD D + T+LI YC
Sbjct: 94 VDVHHRLVGSGLDQDPYL---------------------------------ATKLINMYC 120
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
+ G V A +FD+ EK + W A+ + + L+ +M G+ N T
Sbjct: 121 DLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTY 180
Query: 236 VLSACANLGASEL-------GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
VL AC SEL GK +H + ++ + + L D+YA+ GY+ A VF
Sbjct: 181 VLKACV---VSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVF 237
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK--PDDVTLIAVLTACSHAGL 346
+ +KN+ +W+++I A + +A+++F M + P+ +T+++VL AC+
Sbjct: 238 GAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAA 297
Query: 347 IEKGKEIF-YNMRR-----------------------------DYKVEPNVKHYGCLVDL 376
+E GK + Y +RR DY + +V + L+ +
Sbjct: 298 LEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISI 357
Query: 377 LCRARLLDEAYEVIRNM---PMEPNAVLWGSLLTACASADDGANVELAEIAMERLI---K 430
L +A ++ NM + P+ + + ++L AC+ A VE A+I E ++ +
Sbjct: 358 YGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHA---GLVEEAKILFESMLNKYR 414
Query: 431 LEPFNDGNYVLMSNIYAAKAQWDDA 455
+ P + +Y M +I + D+A
Sbjct: 415 IHPRME-HYACMVDILGRANRLDEA 438
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 267/468 (57%), Gaps = 37/468 (7%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
Q +Q+HA +I+A+ I +T+L + ++ YA +FN++ + +++N++I
Sbjct: 296 QGRQIHAHLIRANITKNIIVETELVHMYSE---CGRLNYAKEIFNRMAERNAYSWNSMIE 352
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFN 161
GY + G ++L+ QM NG+ PD F+ +L +C D ++ + +H+ +V++
Sbjct: 353 GYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEE 412
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK--NVVTWTAMINGHVKQKNYREGIDLFR 219
I + L+ Y G + A ++DQ +K N W +++ G+ + +E + F
Sbjct: 413 EGILQVV-LVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFL 471
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
+M +S +E + LT+V+++ N ++L AL DMY+KCG
Sbjct: 472 EMLESDIEYDVLTMVTIV---------------------NLLVLE----TALVDMYSKCG 506
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
I +A VF + KN+ +WN++I G + HGC +EA+ ++ +M G+ P++VT +A+L+
Sbjct: 507 AITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILS 566
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSH GL+E+G IF +M+ DY +E +HY C+VDLL RA L++A E + MP+EP
Sbjct: 567 ACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEV 626
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
WG+LL AC D +++ +A +RL +L+P N G YV+MSNIYAA +W + +R
Sbjct: 627 STWGALLGACRVHKD---MDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIR 683
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
++MK + + K+PG S IEIN + F G HP +EEIY+ L ++ +
Sbjct: 684 QMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTL 731
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 136/505 (26%), Positives = 243/505 (48%), Gaps = 25/505 (4%)
Query: 16 NSANSHKNSNTATKSH---HHLP---LLQKCTHLVQF---KQVHAQIIKASFDNRTISDT 66
N +S K ++ TK + LP L+Q C F K +H Q+I ++ T
Sbjct: 51 NGPDSPKPTSIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMT 110
Query: 67 QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG 126
++ L + YA +F ++ + A+NT+I YA ++ +M+ G
Sbjct: 111 KILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIG 170
Query: 127 LDPDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSA 183
+ PD+FT+ L+ CG LR G VHS ++ F LI Y D +S
Sbjct: 171 VCPDNFTFASALRVCGALRSRDGGKQVHSKLIAC-GFKGDTFVGNALIDMYAKCDDEESC 229
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDS--GVEVNELTLVSVLSACA 241
+FD+M E+N VTW ++I+ + ++ + + LF +M++S G++ ++ T ++L+ CA
Sbjct: 230 LKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCA 289
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
N G+ +H + + I N + L MY++CG + A +F + E+N +WNS
Sbjct: 290 NQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNS 349
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+I G +G +EA+++F QMQ++GIKPD +L ++L++C +KG+E+ + R+
Sbjct: 350 MIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNT 409
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVI-RNMPMEPNAVLWGSLLTACASADDGANVEL 420
E + LVD+ + +D A++V + + + N LW S+L A+ G E
Sbjct: 410 MEEEGILQV-VLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILA--GYANKGLKKES 466
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAK-AQWDDAGKMRRLMKERNIVKN-PGCSVIEI 478
+E L ++ V + N+ + A D K + K R + N G +++
Sbjct: 467 FNHFLEMLESDIEYDVLTMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSW 526
Query: 479 NDVVHEFMVGDGRHPCSEEIYSMLE 503
N ++ G +H CS+E + E
Sbjct: 527 NAMIS----GYSKHGCSKEALILYE 547
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 175/500 (35%), Positives = 282/500 (56%), Gaps = 29/500 (5%)
Query: 36 LLQKCTHLVQF---KQVHAQIIK-ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
+L C+HL K++HA +K S D + + L ++ N Q+ VF+ +
Sbjct: 304 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL---VDMYCNCKQVLSGCRVFDGM 360
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN-GLDPDSFTYPILLKAC---GDLRQV 147
+ +N +I GYA+ + L+ +M + GL +S T ++ AC G +
Sbjct: 361 FDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKK 420
Query: 148 KGVHSLVVKSK-DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+ +H VVK D + + + L+ Y G + A+ +F +M ++++VTW +I G+V
Sbjct: 421 EAIHGFVVKRGLDRDRFVQN--ALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYV 478
Query: 207 KQKNYREGIDLFRKM---------RDSGVEV--NELTLVSVLSACANLGASELGKWVHEF 255
+ + + + + KM R S V + N +TL+++L +CA L A GK +H +
Sbjct: 479 FSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 538
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
KN + + +G+AL DMYAKCG ++ + +VF + +NV TWN I+ +HG ++A
Sbjct: 539 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDA 598
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
+ M M + G+KP++VT I+V ACSH+G++ +G +IFYNM++DY VEP+ HY C+VD
Sbjct: 599 IDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVD 658
Query: 376 LLCRARLLDEAYEVIRNMPME-PNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
LL RA + EAY++I +P A W SLL AC + N+E+ EIA + LI+LEP
Sbjct: 659 LLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHN---NLEIGEIAAQNLIQLEPN 715
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+YVL++NIY++ W A ++RR MK + + K PGCS IE D VH+F+ GD HP
Sbjct: 716 VASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 775
Query: 495 SEEIYSMLEYVAISLREECY 514
SE++ LE + +R+E Y
Sbjct: 776 SEKLRGYLETLWERMRKEGY 795
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 185/384 (48%), Gaps = 27/384 (7%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
L+ KQVHA ++ N I +T L+ ++A + ++ +NTV
Sbjct: 214 LLMGKQVHAYGLRKGELNSFIINT----LVAMYGKMGKLASSKVLLGSFEGRDLVTWNTV 269
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVK--S 157
+ + ++ +M+ G++PD FT +L AC LR K +H+ +K S
Sbjct: 270 LSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGS 329
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
D NS + S L+ YCN V S +FD M ++ + W AMI G+ + + E + L
Sbjct: 330 LDENSFVGS--ALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLL 387
Query: 218 FRKMRDS-GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYA 276
F +M +S G+ N T+ V+ AC GA + +H FV K + + + AL DMY+
Sbjct: 388 FIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYS 447
Query: 277 KCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM-----------S 325
+ G I+ A R+F + ++++ TWN+II G E+A+ M +MQ+
Sbjct: 448 RLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRV 507
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
+KP+ +TL+ +L +C+ + KGKEI Y ++ + + V LVD+ + L
Sbjct: 508 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG--SALVDMYAKCGCLQ 565
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTA 408
+ +V +P+ N + W ++ A
Sbjct: 566 MSRKVFDQIPIR-NVITWNVIVMA 588
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 163/338 (48%), Gaps = 22/338 (6%)
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK 158
++R + L + Y MI G+ PD+F +P LLKA DL+ + K +H+ V K
Sbjct: 64 LLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYK-- 121
Query: 159 DFNSVIHSLT---RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
F + S+T L+ Y GD + +FD+++E+N V+W ++I+ + + +
Sbjct: 122 -FGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASE---LGKWVHEFVNK----NCIILNDKLG 268
+ FR M D VE + TLVSV AC+N E +GK VH + + N I+N
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIIN---- 236
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
L MY K G + + + +++ TWN+++ L + EA++ +M + G++
Sbjct: 237 -TLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVE 295
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD T+ +VL ACSH ++ GKE+ ++ ++ N LVD+ C + +
Sbjct: 296 PDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCR 355
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
V M + LW +++T A + L I ME
Sbjct: 356 VFDGM-FDRKIGLWNAMITGYAQNEYDEEALLLFIEME 392
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 183/373 (49%), Gaps = 20/373 (5%)
Query: 47 KQVHAQIIKASF--DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
KQ+HA + K + D+ T+++T L+ + VF++I + ++N++I
Sbjct: 113 KQIHAHVYKFGYGVDSVTVANT----LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 168
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG------VHSLVVKSK 158
++ + M+ ++P SFT + AC + +G VH+ ++
Sbjct: 169 SLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG 228
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
+ NS I + L+ Y G + S+++L +++VTW +++ + + + E ++
Sbjct: 229 ELNSFI--INTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYL 286
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN-CIILNDKLGAALTDMYAK 277
R+M GVE + T+ SVL AC++L GK +H + KN + N +G+AL DMY
Sbjct: 287 REMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 346
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS-GIKPDDVTLIA 336
C + RVF + ++ + WN++I G A + EEA+ +F +M+ S G+ + T+
Sbjct: 347 CKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAG 406
Query: 337 VLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
V+ AC +G K + I + ++R + V++ L+D+ R +D A + M
Sbjct: 407 VVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQN--ALMDMYSRLGKIDIAKRIFGKME- 463
Query: 396 EPNAVLWGSLLTA 408
+ + V W +++T
Sbjct: 464 DRDLVTWNTIITG 476
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 161/427 (37%), Positives = 250/427 (58%), Gaps = 27/427 (6%)
Query: 99 FNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVV 155
++ VI GYA+ G G + + QMI G +P+S T LL AC G L Q H+ +
Sbjct: 363 WSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSL 422
Query: 156 KS-------------KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT--EKNVVTWTA 200
K + V+H+ LI Y K+A+ +F+ + E+NVVTWT
Sbjct: 423 KKCLLSLDNDFGGDGDGEDLVVHNA--LIDMYSKCRSFKAARTIFNSIPRRERNVVTWTV 480
Query: 201 MINGHVKQKNYREGIDLFRKM--RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
MI G+ + + + + LF +M + V N T+ +L ACA+L + +GK +H +V +
Sbjct: 481 MIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTR 540
Query: 259 NCIILNDKLGAA--LTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAV 316
+ + A L DMY+KCG ++ A VF + ++N +W S++ G +HG G+EA+
Sbjct: 541 HHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEAL 600
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDL 376
+F +MQ +G PDD++ + +L ACSH+G++++G + F MR DY V + +HY C++DL
Sbjct: 601 DIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDL 660
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFND 436
L R+ LD+A++ I+ MPMEP+A +W +LL+AC +NVELAE A+ +L+ ++ ND
Sbjct: 661 LARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVH---SNVELAEYALNKLVSMKAEND 717
Query: 437 GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSE 496
G+Y L+SNIYA +W D ++R+LMK+ I K PGCS ++ F VGD HP S
Sbjct: 718 GSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSP 777
Query: 497 EIYSMLE 503
EIYS+LE
Sbjct: 778 EIYSLLE 784
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 205/459 (44%), Gaps = 77/459 (16%)
Query: 32 HHLPLLQKCTHLVQFKQVHAQIIKASF----------------DNRTISDTQLAK-LIES 74
H LL++C + +Q+H +II + +S L ++ S
Sbjct: 33 HFASLLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVVAS 92
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
+ + A V +++ +N ++R + E G R I + +M+ G PD FT
Sbjct: 93 YLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTL 152
Query: 135 PILLKACGDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT 191
P LKACG+L R H L+ F S + L+ Y G ++ A L+FD++T
Sbjct: 153 PYALKACGELPSYRSGSAFHGLIC-CNGFESNVFVCNALVAMYSRSGSLEDASLVFDEIT 211
Query: 192 EK---NVVTWTAMINGHVKQKNYREGIDLFRKM------RDSGVEVNELTLVSVLSACAN 242
K +V++W +++ HVK N R +DLF +M + + + +++V++L ACA+
Sbjct: 212 RKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACAS 271
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN-- 300
L A K +H + +N + + AL D YAKCG +++A+ VF ++ K+V +WN
Sbjct: 272 LKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAM 331
Query: 301 ---------------------------------SIIGGLAIHGCGEEAVKMFWQMQMSGI 327
++I G A G G+EA+ F QM + G
Sbjct: 332 VTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGS 391
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRR----------DYKVEPNVKHYGCLVDL 376
+P+ VT+I++L+AC+ G + +G E Y++++ ++ + L+D+
Sbjct: 392 EPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDM 451
Query: 377 LCRARLLDEAYEVIRNMP-MEPNAVLWGSLLTACASADD 414
+ R A + ++P E N V W ++ A D
Sbjct: 452 YSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGD 490
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 163/316 (51%), Gaps = 30/316 (9%)
Query: 117 QLYTQMIGNGLDPDSFTYPILLKA---CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
++++ I NG D+F L+ CG ++ V +++ +F V+ S ++T
Sbjct: 280 EIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVM----EFKDVV-SWNAMVTG 334
Query: 174 YCNFGDVKSAQLLFDQMTEKN----VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
Y G +A LF M ++N V+TW+A+I G+ ++ +E +D F++M G E N
Sbjct: 335 YTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPN 394
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA------------ALTDMYAK 277
+T++S+LSACA+LGA G H + K C++ D AL DMY+K
Sbjct: 395 SVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSK 454
Query: 278 CGYIEEALRVFKIV--LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM--QMSGIKPDDVT 333
C + A +F + E+NV TW +IGG A +G +A+K+F +M + + P+ T
Sbjct: 455 CRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYT 514
Query: 334 LIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG-CLVDLLCRARLLDEAYEVIRN 392
+ +L AC+H + GK+I + R ++ E +V CL+D+ + +D A V +
Sbjct: 515 ISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDS 574
Query: 393 MPMEPNAVLWGSLLTA 408
MP + N V W S+++
Sbjct: 575 MP-KRNEVSWTSMMSG 589
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 137/340 (40%), Gaps = 39/340 (11%)
Query: 115 GIQLYT----QMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVV--------------- 155
G+Q + + G + P F LLK C + V+ +H ++
Sbjct: 13 GVQFLSVASAECTGRDVSPTHFAS--LLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVS 70
Query: 156 ----KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
S + S T ++ Y G A + +++ V W ++ H+++
Sbjct: 71 LPPLPSHSYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRL 130
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
I + +M +G + + TL L AC L + G H + N N + AL
Sbjct: 131 DRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNAL 190
Query: 272 TDMYAKCGYIEEALRVFKIVLEK---NVCTWNSIIGGLAIHGCGEEAVKMFWQM------ 322
MY++ G +E+A VF + K +V +WNSI+ A+ +F +M
Sbjct: 191 VAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHE 250
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRAR 381
+ + + D ++++ +L AC+ + + KEI Y +R + V + L+D +
Sbjct: 251 KATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCN--ALIDTYAKCG 308
Query: 382 LLDEAYEVIRNMPMEPNAVLWGSLLTA-CASADDGANVEL 420
+ +A V M + + V W +++T S GA EL
Sbjct: 309 SMKDAVNVFNVMEFK-DVVSWNAMVTGYTQSGKFGAAFEL 347
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 72/177 (40%), Gaps = 10/177 (5%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L C HL KQ+HA + + ++ LI+ + A VF+ +
Sbjct: 518 ILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANC-LIDMYSKCGDVDTARNVFDSMP 576
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-KGVH 151
+ ++ +++ GY G G + ++ +M G PD ++ +LL AC V +G+
Sbjct: 577 KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLD 636
Query: 152 SLVVKSKDFNSVIHSLTR---LITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMING 204
+ D+ VI S +I G + A +M E + W A+++
Sbjct: 637 YFDIMRSDYG-VIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSA 692
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 167/463 (36%), Positives = 270/463 (58%), Gaps = 15/463 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST--FAFNTVIR 104
Q HA +K S + + L LI + + A A LV + ++ ++NT+I
Sbjct: 113 SQFHALSLKLSLASDSFV---LNALINMYSSCNYPASARLVLDSAPRWASDVVSWNTIIA 169
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVV-KSKDF 160
GY G+ ++ +Q + QM + D T +L AC G ++ H+LVV +
Sbjct: 170 GYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEI 229
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
N I S L++ Y G V+ A+ +F++M E+NVV WT+MI G + ++E +DLFR
Sbjct: 230 NCYIGS--SLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRD 287
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M+ +GV+ ++ T+ +V+S+C +GA +LG+++H + + + + + +L DMY+KCG
Sbjct: 288 MQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGD 347
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLT 339
+ +A ++F + +++V TW +I G A++G EA+ +F QM+ + P++V + VLT
Sbjct: 348 VNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLT 407
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSH GL+E+G F+ M + Y + P ++HYGC+VDLL RA+LL EA + I++MP+ P+
Sbjct: 408 ACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDV 467
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
V+W SLL AC ++ V LAE A ER+ +LEP G +VL+SN+YA +W D +R
Sbjct: 468 VVWRSLLFACRAS---GQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNVR 524
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
M K PGCS IE++ +HEF GD H +E I + L
Sbjct: 525 TGMGNSRTSKKPGCSFIEVDGCIHEFFAGDESHFETEAICNTL 567
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 166/489 (33%), Positives = 283/489 (57%), Gaps = 14/489 (2%)
Query: 36 LLQKCTHL--VQF-KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+LQ C HL ++F K VH +I + ++ T T LI + + VF+ +
Sbjct: 381 ILQACGHLGDLEFGKYVHDYMITSGYECDT---TASNILINMYAKCGNLLASQEVFSGMK 437
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKG 149
+ ++N++I Y + G ++L+ +M+ + PDS TY +LL GDL K
Sbjct: 438 CKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKE 496
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H + K FNS I L+ Y G++ + +F+ M ++++TW +I V +
Sbjct: 497 LHCDLAK-MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSE 555
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+ G+ + +MR GV + T++S+L C+ L A GK +H + K + + +G
Sbjct: 556 DCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGN 615
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
L +MY+KCG + + +VFK++ K+V TW ++I ++G G++AV+ F +M+ +GI P
Sbjct: 616 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVP 675
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D V +A++ ACSH+GL+E+G F+ M++DYK+EP ++HY C+VDLL R+ LLD+A +
Sbjct: 676 DHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF 735
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I +MP++P++ +WG+LL+AC + D E+A+ ER+I+L P + G YVL+SN+YAA
Sbjct: 736 ILSMPLKPDSSIWGALLSACRMSGD---TEIAQRVSERIIELNPDDTGYYVLVSNVYAAL 792
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+WD +R+ +K R + K+PGCS +EI + V+ F G EE+ +L +A +
Sbjct: 793 GKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLM 852
Query: 510 REECYAARM 518
+E Y A +
Sbjct: 853 AKEGYIANL 861
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 190/369 (51%), Gaps = 15/369 (4%)
Query: 44 VQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS--TFAFNT 101
Q ++H+ II + I AKLI + + VF ++ +PS + +N+
Sbjct: 89 TQLHKLHSLIITLGLHHSVIFS---AKLIAKYAHFRDPTSSFSVF-RLASPSNNVYXWNS 144
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSK 158
+IR GL + LY++ L PD++T+P ++ AC D K +H V+
Sbjct: 145 IIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVL-XM 203
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
F S ++ LI YC F D+ A+ +F++M ++VV+W ++I+G+ + E ++++
Sbjct: 204 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 263
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
+ R+ GV + T+ SVL AC LG+ E G +H + K I + + L MY K
Sbjct: 264 YRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF 323
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
+ + R+F ++ ++ +WN++I G + G EE++K+F +M ++ KPD +T+ ++L
Sbjct: 324 NGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSIL 382
Query: 339 TACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
AC H G +E GK + Y + Y+ + + L+++ + L + EV M +
Sbjct: 383 QACGHLGDLEFGKYVHDYMITSGYECDTTASN--ILINMYAKCGNLLASQEVFSGMKCK- 439
Query: 398 NAVLWGSLL 406
++V W S++
Sbjct: 440 DSVSWNSMI 448
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 275/506 (54%), Gaps = 48/506 (9%)
Query: 48 QVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
Q+H+ I K+ +SD + + L++ + A VF+++ + + ++N++I Y
Sbjct: 173 QIHSLIAKSP----CLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCY 228
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVK-SKDFNS 162
+ G ++++ M+ + ++PD T ++ AC L +K VH+ VVK K N
Sbjct: 229 EQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRND 288
Query: 163 VIHS------------------------------LTRLITFYCNFGDVKSAQLLFDQMTE 192
+I S T +++ Y K+A+L+F +M E
Sbjct: 289 IILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAE 348
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
+NVV+W A+I G+ + E + LF ++ V T ++L ACA+L LG
Sbjct: 349 RNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQA 408
Query: 253 HEFVNKNCIILNDK------LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
H V K+ +G +L DMY KCG +EE VF+ ++E++ +WN++I G
Sbjct: 409 HVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGF 468
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
A +G G EA+++F +M SG KPD +T+I VL+AC HAG +E+G+ F +M RD+ V P
Sbjct: 469 AQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPL 528
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
HY C+VDLL RA L+EA +I MP++P++V+WGSLL AC N+ L + E
Sbjct: 529 RDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVH---RNITLGKYVAE 585
Query: 427 RLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFM 486
+L ++E N G YVL+SN+YA +W DA +R+LM++ + K PGCS I+I H FM
Sbjct: 586 KLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFM 645
Query: 487 VGDGRHPCSEEIYSMLEYVAISLREE 512
V D HP ++I+S+L+ + +R++
Sbjct: 646 VKDKSHPRKKQIHSLLDILIAEMRQK 671
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 209/479 (43%), Gaps = 82/479 (17%)
Query: 25 NTATKSHHHLPLLQKCTHL----VQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQ 80
++ T S LL C L + + VHA +IK+ F N +LI++
Sbjct: 14 SSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQN---RLIDAYAKCGS 70
Query: 81 IAYAHLVFNQIINPSTFAFNTVI-------------------------------RGYAEA 109
+ +F+++ + F +N+V+ G+A+
Sbjct: 71 LEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQH 130
Query: 110 GLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-KGV--HSLVVKSKDFNSVIHS 166
+ + M G + +T+ L AC L + +GV HSL+ KS + V +
Sbjct: 131 DRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDV-YI 189
Query: 167 LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV 226
+ L+ Y G+V AQ +FD+M ++NVV+W ++I + + E + +F+ M +S V
Sbjct: 190 GSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWV 249
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND-KLGAALTDMYAKCGYIEEAL 285
E +E+TL SV+SACA+L A ++G+ VH V K + ND L A DMYAKC I+EA
Sbjct: 250 EPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEAR 309
Query: 286 RVFKI-------------------------------VLEKNVCTWNSIIGGLAIHGCGEE 314
+F + E+NV +WN++I G +G EE
Sbjct: 310 FIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACS-----HAGLIEKGKEIFYNMRRDYKVEPNVKH 369
A+ +F ++ + P T +L AC+ H G+ + + + E ++
Sbjct: 370 ALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFV 429
Query: 370 YGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
L+D+ + ++E Y V R M ME + V W +++ A +G E E+ E L
Sbjct: 430 GNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQ--NGYGNEALELFREML 485
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 161/324 (49%), Gaps = 41/324 (12%)
Query: 128 DPDSFT----YPILLKACGDLR----QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
D SFT + LL +C L+ V+ VH+ V+KS F++ + RLI Y G
Sbjct: 12 DLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKS-GFSNEVFIQNRLIDAYAKCGS 70
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM--RDS------------- 224
++ + LFD+M ++NV TW +++ G K E LFR M RD
Sbjct: 71 LEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQH 130
Query: 225 ----------------GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
G +NE T S LSAC+ L G +H + K+ + + +G
Sbjct: 131 DRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIG 190
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+AL DMY+KCG + +A +VF + ++NV +WNS+I +G EA+K+F M S ++
Sbjct: 191 SALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVE 250
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD+VTL +V++AC+ I+ G+E+ + + K+ ++ VD+ + + EA
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 389 VIRNMPMEPNAVLWGSLLTACASA 412
+ +MP+ N + S+++ A A
Sbjct: 311 IFDSMPIR-NVIAETSMVSGYAMA 333
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 16/226 (7%)
Query: 36 LLQKCTHLVQFK---QVHAQIIKASFDNRTISDTQL---AKLIESLVNSSQIAYAHLVFN 89
+L+ C L Q H ++K F ++ + + LI+ V + +LVF
Sbjct: 392 ILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-K 148
+++ ++N +I G+A+ G G+ ++L+ +M+ +G PD T +L ACG V +
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEE 511
Query: 149 GVHSLVVKSKDFN--SVIHSLTRLITFYCNFGDVKSAQLLFDQM-TEKNVVTWTAMINGH 205
G H ++DF + T ++ G ++ A+ + ++M + + V W +++
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAAC 571
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+N G + K+ + VE + +LS N+ A ELGKW
Sbjct: 572 KVHRNITLGKYVAEKLFE--VETSNSGPYVLLS---NMYA-ELGKW 611
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 273/478 (57%), Gaps = 14/478 (2%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
++ C L+ K++H +++++ F + + L++ + A VF QI
Sbjct: 405 VISSCARLLDLERGKEIHMELVRSGF---ALDGFVSSALVDMYGKCGCLEMAKEVFEQIQ 461
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKG 149
+ ++N++I GY+ G I+L+ +M G+ P T +L AC +L+ K
Sbjct: 462 RKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKF 521
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H +++++ + I + LI Y G++ SA+ +F M + NVV+W MI+G+VK
Sbjct: 522 IHGYIIRNR-VEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVG 580
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+Y E + +F MR +GV+ + +T SVL AC+ L E GK +H F+ ++ + +N+ +
Sbjct: 581 SYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMG 640
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG ++EAL +F + E++ +W S+I HG EA+K+F +MQ S KP
Sbjct: 641 ALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKP 700
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D VT +A+L+ACSHAGL+++G F M +Y +P V+HY CL+DLL R L EAYE+
Sbjct: 701 DKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEI 760
Query: 390 IRNMP-MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
++ P + + L +L +AC ++L E LI+ +P + Y+++SN+YA+
Sbjct: 761 LQRTPDIREDVGLLSTLFSACHLHK---KLDLGEQIGRLLIEKDPDDPSTYIILSNMYAS 817
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
+WD+ K+R +KE + KNPGCS IE+ +H F+V D HP ++ IY + +A
Sbjct: 818 VKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILA 875
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 195/367 (53%), Gaps = 11/367 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFA-FNTVIRG 105
K +H +I+ N T LI + A LVF I NP +N ++
Sbjct: 215 KLIHQKIVSLGLQNNI---TLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAA 271
Query: 106 YAEAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFN 161
+ + G++++ +++ L PD+FTYP +LKAC L +V K VH+ V+KS F
Sbjct: 272 CTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKS-GFA 330
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
+ ++ + Y + A LFD+M E++V +W +I+ + + + ++LF +M
Sbjct: 331 MDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEM 390
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
+ SG + + +TL +V+S+CA L E GK +H + ++ L+ + +AL DMY KCG +
Sbjct: 391 KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCL 450
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
E A VF+ + KNV +WNS+I G ++ G + +++F +M GI+P TL ++L AC
Sbjct: 451 EMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMAC 510
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
S + ++ GK I + R+ +VE ++ L+DL + + A V +NMP + N V
Sbjct: 511 SRSVNLQLGKFIHGYIIRN-RVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVVS 568
Query: 402 WGSLLTA 408
W +++
Sbjct: 569 WNVMISG 575
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 4/162 (2%)
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK-NVCTWNSIIGGL 306
LGK +H+ + + N L +L ++Y C + A VF+ + ++ WN ++
Sbjct: 213 LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAAC 272
Query: 307 AIHGCGEEAVKMFWQ-MQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
+ E +++F + + +KPD T +VL ACS G + GK + ++ +
Sbjct: 273 TKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKS-GFAM 331
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
+V V + + + ++A ++ MP E + W ++++
Sbjct: 332 DVVVMSSAVGMYAKCNVFEDAIKLFDEMP-ERDVASWNNVIS 372
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 167/463 (36%), Positives = 270/463 (58%), Gaps = 15/463 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST--FAFNTVIR 104
Q HA +K S + + L LI + + A A LV + ++ ++NT+I
Sbjct: 25 SQFHALSLKLSLASDSFV---LNALINMYSSCNYPASARLVLDSAPRWASDVVSWNTIIA 81
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKGVHSLVV-KSKDF 160
GY G+ ++ +Q + QM + D T +L AC G ++ H+LVV +
Sbjct: 82 GYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEI 141
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
N I S L++ Y G V+ A+ +F++M E+NVV WT+MI G + ++E +DLFR
Sbjct: 142 NCYIGS--SLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRD 199
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M+ +GV+ ++ T+ +V+S+C +GA +LG+++H + + + + + +L DMY+KCG
Sbjct: 200 MQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGD 259
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLT 339
+ +A ++F + +++V TW +I G A++G EA+ +F QM+ + P++V + VLT
Sbjct: 260 VNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLT 319
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
ACSH GL+E+G F+ M + Y + P ++HYGC+VDLL RA+LL EA + I++MP+ P+
Sbjct: 320 ACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDV 379
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
V+W SLL AC ++ V LAE A ER+ +LEP G +VL+SN+YA +W D +R
Sbjct: 380 VVWRSLLFACRAS---GQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNVR 436
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
M K PGCS IE++ +HEF GD H +E I + L
Sbjct: 437 TGMGNSRTSKKPGCSFIEVDGCIHEFFAGDESHFETEAICNTL 479
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE--- 293
+SA A + + ++G H K + + + AL +MY+ C Y A ++VL+
Sbjct: 12 ISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASA----RLVLDSAP 67
Query: 294 ---KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+V +WN+II G G +A++ F QM ++ D+VTL+ VL AC+ G ++ G
Sbjct: 68 RWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVG 127
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ + + E N LV + + +++EA V MP E N V W S++ C
Sbjct: 128 S-LCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMP-ERNVVCWTSMIAGCT 185
Query: 411 SA 412
+
Sbjct: 186 QS 187
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 244/440 (55%), Gaps = 40/440 (9%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
++ + + A +F ++ + ++ T+I GY H + +Y M+ +GL +
Sbjct: 473 MLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALN 532
Query: 131 SFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVIHSLTRLITFY--CNFGD------ 179
L+ ACG L + +H +VVK K F+ T +I FY C D
Sbjct: 533 EILVVNLVSACGRLNAIGDGWQLHGMVVK-KGFDCYNFIQTTIIHFYAACGMMDLACLQF 591
Query: 180 -----------------------VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID 216
V A+ +FD M E++V +W+ MI+G+ + R ++
Sbjct: 592 EVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALE 651
Query: 217 LFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYA 276
LF KM SG++ NE+T+VSV SA A LG + G+W HE++ I LND L AAL DMYA
Sbjct: 652 LFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALIDMYA 711
Query: 277 KCGYIEEALRVFKIVLEK--NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
KCG I AL+ F + +K +V WN+II GLA HG + +F MQ IKP+ +T
Sbjct: 712 KCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITF 771
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
I VL+AC HAGL+E G+ IF M+ Y VEP++KHYGC+VDLL RA LL+EA E+IR+MP
Sbjct: 772 IGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMP 831
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
M+ + V+WG+LL AC + D V + E A E L L P + G VL+SNIYA +W+D
Sbjct: 832 MKADIVIWGTLLAACRTHGD---VNIGERAAESLAGLAPSHGGGKVLLSNIYADAGRWED 888
Query: 455 AGKMRRLMKERNIVKNPGCS 474
+RR ++ + + + PGCS
Sbjct: 889 VSLVRRAIQNQRMERMPGCS 908
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 173/411 (42%), Gaps = 100/411 (24%)
Query: 37 LQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPST 96
L+ C+ Q +Q+H+ ++K + T L I I A L+F+ +
Sbjct: 279 LKYCSSSSQGRQLHSLVLKLGLHSNTFIQNSL---INMYAKRGSIKDAQLLFDACPTLNP 335
Query: 97 FAFNTVIRGYAEAG-----------LGHRGIQLYTQMI--------------------GN 125
+ N ++ GYA+AG + +G YT MI +
Sbjct: 336 ISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSD 395
Query: 126 GLDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
G+ P+ T ++ AC G++ + +H++ +K V+ S T L+ YC V
Sbjct: 396 GVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVS-TNLMRAYCLCSGVGE 454
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVK-------------------------------QKNY 211
A+ LFD+M E N+V+W M+NG+ K
Sbjct: 455 ARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRL 514
Query: 212 REGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAAL 271
E + ++R M SG+ +NE+ +V+++SAC L A G +H V K + + +
Sbjct: 515 HEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTI 574
Query: 272 TDMYAKCG-------------------------------YIEEALRVFKIVLEKNVCTWN 300
YA CG +++A ++F + E++V +W+
Sbjct: 575 IHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWS 634
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
++I G A A+++F +M SGIKP++VT+++V +A + G +++G+
Sbjct: 635 TMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGR 685
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 180/399 (45%), Gaps = 71/399 (17%)
Query: 114 RGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
+G QL++ ++ GL ++F L+ +K L N + S ++
Sbjct: 287 QGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPI--SCNIMVCG 344
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y G + +A+ LFD M +K V++T MI G V+ + +RE +++F+ MR GV N+LTL
Sbjct: 345 YAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTL 404
Query: 234 VSVLSACANLGASELGKWVHE-----FVNKNCIILNDKLGA------------------- 269
V+V+ AC++ G + +H FV ++ + + A
Sbjct: 405 VNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPE 464
Query: 270 -------ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
+ + YAK G ++ A +F+ V +K+V +W ++I G + EA+ M+ M
Sbjct: 465 VNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAM 524
Query: 323 QMSGIKPDDVTLIAVLTACS-----------HAGLIEKGKEI----------FYN----- 356
SG+ +++ ++ +++AC H +++KG + FY
Sbjct: 525 LRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMM 584
Query: 357 ----MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
++ + + +++ + LV + R++D+A ++ +MP E + W ++++ A
Sbjct: 585 DLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMP-ERDVFSWSTMISGYAQT 643
Query: 413 DDGANVELAEIAMERLIKLEPFN-DGNYVLMSNIYAAKA 450
D + IA+E K+ N V M ++++A A
Sbjct: 644 DQ------SRIALELFHKMVASGIKPNEVTMVSVFSAIA 676
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 196 VTWTAMING--HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH 253
V++++ N HV+ + GI ++ + E EL LVS L C+ +S G+ +H
Sbjct: 237 VSFSSSTNASPHVQDPQHFIGIFCNARLHQNHYEC-ELALVSALKYCS---SSSQGRQLH 292
Query: 254 EFVNKNCIILNDKLGAALTDMYAK--------------------------CGY-----IE 282
V K + N + +L +MYAK CGY ++
Sbjct: 293 SLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLD 352
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A ++F I+ +K ++ ++I GL + C EA+++F M+ G+ P+D+TL+ V+ ACS
Sbjct: 353 NARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACS 412
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
H G I + I + + VE V L+ C + EA + MP E N V W
Sbjct: 413 HFGEILNCRMI-HAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMP-EVNLVSW 470
Query: 403 GSLLTACASAD--DGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
+L A A D A + + +I DG Y+LM+ ++ A
Sbjct: 471 NVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDG-YILMNRLHEA 517
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 248/436 (56%), Gaps = 40/436 (9%)
Query: 116 IQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHS-------------------L 153
++ Y +M GL D+FT P +LK+C DL +V + VH +
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 154 VVK-------SKDFNSVI----HSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMI 202
VK K F+ +I S LI Y G++ A+ LF++M +N+V+WTAMI
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEV--NELTLVSVLSACANLGASELGKWVHEFVNKNC 260
+G+ + + + LF +M G E+ N +T+VSVL ACA A E G+ +H+F N
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 271
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLE--KNVCTWNSIIGGLAIHGCGEEAVKM 318
+ LN + AL MYAKC + EA F ++ + KN+ WN++I A HGCG EAV +
Sbjct: 272 LHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 331
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
F M +G++PD VT + +L+ CSH+GLI+ G F +M + VEP V+HY C+VDLL
Sbjct: 332 FENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLG 391
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGN 438
RA L EA E+I MPM+ +WG+LL AC S N+E+AE+A RL LEP N GN
Sbjct: 392 RAGRLVEAKELISQMPMQAGPSVWGALLAACRSHR---NLEIAELAARRLFVLEPDNSGN 448
Query: 439 YVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
YVL+SN+YA W++ K+R L+K + + K+PGCS IEIN H FM D HP ++EI
Sbjct: 449 YVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEI 508
Query: 499 YSMLEYVAISLREECY 514
Y LE + ++ Y
Sbjct: 509 YKFLEALPEKIKMAGY 524
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/441 (37%), Positives = 257/441 (58%), Gaps = 18/441 (4%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
+F ++ ++NT+I ++++ + + M+ G++ D T +L AC L +
Sbjct: 170 LFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLER 229
Query: 147 V---KGVHSLVVKSKDF--NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
+ K +H+ V+++ D NS + S L+ YCN V+S + +FD + + + W AM
Sbjct: 230 LDVGKEIHAYVLRNNDLIENSFVGSA--LVDMYCNCRQVESGRRVFDHILGRRIELWNAM 287
Query: 202 INGHVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACA-NLGASELGKWVHEFVNKN 259
I+G+ + + + LF +M + +G+ N T+ SV+ AC +L A GK +H + +N
Sbjct: 288 ISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRN 347
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ + +G+AL DMYAKCG + + RVF + KNV TWN +I +HG GEEA+++F
Sbjct: 348 MLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELF 407
Query: 320 WQMQMSG-----IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
M KP++VT I V ACSH+GLI +G +FY M+ D+ VEP HY C+V
Sbjct: 408 KNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVV 467
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAV-LWGSLLTACASADDGANVELAEIAMERLIKLEP 433
DLL RA L+EAYE++ MP E + V W SLL AC NVEL E+A + L+ LEP
Sbjct: 468 DLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQ---NVELGEVAAKNLLHLEP 524
Query: 434 FNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHP 493
+YVL+SNIY++ W+ A ++R+ M++ + K PGCS IE D VH+FM GD HP
Sbjct: 525 NVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHP 584
Query: 494 CSEEIYSMLEYVAISLREECY 514
SE+++ LE ++ +R+E Y
Sbjct: 585 QSEQLHGFLETLSEKMRKEGY 605
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 174/347 (50%), Gaps = 28/347 (8%)
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVH 151
ST ++ +R + I Y +M +G PD+F +P +LKA DL+ + +H
Sbjct: 56 STASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIH 115
Query: 152 SLVVK---SKDFNSVIHSLTR-----------------LITFYCNFGDVKSAQLLFDQMT 191
+ VK +V ++L L+ Y G V ++ LF+
Sbjct: 116 AAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFV 175
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
++++V+W MI+ + + E + FR M GVE++ +T+ SVL AC++L ++GK
Sbjct: 176 DRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKE 235
Query: 252 VHEFV-NKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
+H +V N +I N +G+AL DMY C +E RVF +L + + WN++I G A +G
Sbjct: 236 IHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNG 295
Query: 311 CGEEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHA-GLIEKGKEIFYNMRRDYKVEPNVK 368
E+A+ +F +M +++G+ P+ T+ +V+ AC H+ I KGKEI R+ + ++
Sbjct: 296 LDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNM-LASDIT 354
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
LVD+ + L+ + V MP + N + W L+ AC G
Sbjct: 355 VGSALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMACGMHGKG 400
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 167/352 (47%), Gaps = 31/352 (8%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQI 91
+L C+HL + K++HA +++ +N I ++ + + L++ N Q+ VF+ I
Sbjct: 220 VLPACSHLERLDVGKEIHAYVLR---NNDLIENSFVGSALVDMYCNCRQVESGRRVFDHI 276
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKAC----GDLRQ 146
+ +N +I GYA GL + + L+ +MI GL P++ T ++ AC + +
Sbjct: 277 LGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAK 336
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
K +H+ +++ S I + L+ Y G + ++ +F++M KNV+TW +I
Sbjct: 337 GKEIHAYAIRNM-LASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACG 395
Query: 207 KQKNYREGIDLFRKM-----RDSGVEVNELTLVSVLSACANLG-ASELGKWVHEFVNKNC 260
E ++LF+ M R + NE+T ++V +AC++ G SE + + +
Sbjct: 396 MHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHG 455
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK--NVCTWNSIIGGLAIHG---CGEEA 315
+ A + D+ + G +EEA + + + V W+S++G IH GE A
Sbjct: 456 VEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVA 515
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTAC-SHAGLIEKGKEIFYNMRR-DYKVEP 365
K ++ P+ + +L+ S AGL K E+ NMR+ K EP
Sbjct: 516 AKNLLHLE-----PNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEP 562
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 22/239 (9%)
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV 252
++ +W + + ++RE I + +M SG + +VL A + L + G+ +
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 253 HEFVNK-------------------NCIILNDKL--GAALTDMYAKCGYIEEALRVFKIV 291
H K C + DK AL MYAK G ++++ +F+
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
+++++ +WN++I + EA+ F M + G++ D VT+ +VL ACSH ++ GK
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGK 234
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
EI + R+ + N LVD+ C R ++ V ++ + LW ++++ A
Sbjct: 235 EIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHI-LGRRIELWNAMISGYA 292
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/470 (35%), Positives = 271/470 (57%), Gaps = 14/470 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQII 92
LP + + L K++H I+ F D +A + + + A VF +
Sbjct: 243 LPACLEISQLRSLKELHGYSIRHGFQ----YDELVANGFVAAYAKCGMLICAERVFYSME 298
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
+ ++N +I G A+ G + + LY QM +GL PD FT LL A L+ + K
Sbjct: 299 TKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKE 358
Query: 150 VHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
VH V++ + +S I L++ Y + G+ SA+LLFD M EK+ V+W AMI+G+ +
Sbjct: 359 VHGFVLRHGLEIDSFIG--ISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQN 416
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
+ + LFRK+ G + +++ +VSVL AC+ A LGK H + K ++ + +
Sbjct: 417 GLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVA 476
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+ DMYAK G I+E+ VF + K++ +WN+II +HG GEE++++F +M+ G
Sbjct: 477 CSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQM 536
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD T I +LT CSHAGL+E+G + F M+ + +EP ++HY C++D+L RA LD+A
Sbjct: 537 PDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALR 596
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
++ MP +P++ +W SLL+ C + + +E+ +I E+L++LEP N NYV +SN+YA
Sbjct: 597 LVHEMPEQPDSRVWSSLLSFCRNFGE---LEIGQIVAEKLLELEPKNVENYVSLSNLYAG 653
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
+WDD ++R+++K+ + K+ GCS IE+ VH F+ GD P S+E+
Sbjct: 654 SGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEM 703
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 140/273 (51%), Gaps = 7/273 (2%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGN--GLDPDSFTYPILLKACG-- 142
VF+ + + ++N++I G++E G + +M+ GL PD T +L C
Sbjct: 88 VFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCARE 147
Query: 143 -DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
D++ +H L VK + + L+ Y G + AQ+LFD+ KN V+W M
Sbjct: 148 VDVQMGIRIHGLAVK-LGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTM 206
Query: 202 INGHVKQKNYREGIDLFRKMR-DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
I G + E +LFR+M+ +EVNE+T++++L AC + K +H + ++
Sbjct: 207 IGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHG 266
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
++ + YAKCG + A RVF + K V +WN++IGG A +G +A+ ++
Sbjct: 267 FQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYI 326
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
QM SG+ PD T+ ++L A +H + GKE+
Sbjct: 327 QMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEV 359
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 157/313 (50%), Gaps = 24/313 (7%)
Query: 116 IQLYTQMIGNG-LDPDSFTYPILLKAC-GDLRQVKG--VHSLVVKSKDFNSVIHSLTRLI 171
I ++ ++I + + D+FT+P ++KAC G L + G +H +V+K V LI
Sbjct: 15 IDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVG-NALI 73
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR--DSGVEVN 229
Y FG V +A +F M +N+V+W ++I+G + ++ D+ +M + G+ +
Sbjct: 74 AMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPD 133
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
TLV+VL CA ++G +H K + + ++ +L DMY+KCGY+ EA +F
Sbjct: 134 IATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFD 193
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS-GIKPDDVTLIAVLTACSHAGLIE 348
KN +WN++IGGL G EA +F +MQM I+ ++VT++ +L AC +
Sbjct: 194 KNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLR 253
Query: 349 KGKEIF-YNMRRDYKVEPNVKH-----YGCLVDLLCRARLLDEAYEVIRNMPMEPNAV-L 401
KE+ Y++R ++ + V + Y L+C R+ ME V
Sbjct: 254 SLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVF---------YSMETKTVNS 304
Query: 402 WGSLLTACASADD 414
W +L+ CA D
Sbjct: 305 WNALIGGCAQNGD 317
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 102/199 (51%), Gaps = 5/199 (2%)
Query: 211 YREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
Y + ID+F K+ D+ + T V+ AC LG+ +H V K ++L+ +G
Sbjct: 11 YSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGN 70
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS--GI 327
AL MY K G+++ A++VF + +N+ +WNSII G + +G ++ M +M G+
Sbjct: 71 ALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGL 130
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
PD TL+ VL C+ ++ G I + + + +V+ LVD+ + L EA
Sbjct: 131 LPDIATLVTVLPVCAREVDVQMGIRI-HGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEA- 188
Query: 388 EVIRNMPMEPNAVLWGSLL 406
+++ + NAV W +++
Sbjct: 189 QMLFDKNNRKNAVSWNTMI 207
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/479 (33%), Positives = 268/479 (55%), Gaps = 46/479 (9%)
Query: 72 IESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS 131
I L++ +++ A+ VFN+ +N++I G + GL I++Y +M + P+
Sbjct: 200 ITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNE 259
Query: 132 FTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
T ++ +C DL K H + K I L+ Y G++ +A++LFD
Sbjct: 260 ITMIGMISSCSQVQDLNLGKEFHCYI-KEHGLEFTIPLTNALMDMYVKCGELLTARVLFD 318
Query: 189 QMTEKNVVTWTAM-------------------------------INGHVKQKNYREGIDL 217
M +K +V+WT M I+G V+ K +E + L
Sbjct: 319 NMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALAL 378
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
F +M+ +E +++T+V+ LSAC+ LGA ++G W+H ++ ++ + ++ LG AL DMYAK
Sbjct: 379 FHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAK 438
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG I AL+VF+ + ++N TW ++I GLA+HG ++A+ F +M GI PD++T + V
Sbjct: 439 CGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGV 498
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
L+AC H GL+E+G++ F M + V P +KHY C+VDLL RA L+EA E+++NMPM
Sbjct: 499 LSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAA 558
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
+A + G+L AC NV++ E +L++++P + GNYVL++++Y+ W +A
Sbjct: 559 DAAVLGALFFACRVY---GNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARS 615
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
R+LM ++ + K PGCS++EIN +VHEF++ P + + Y L CY+A
Sbjct: 616 ARKLMNDKGVEKTPGCSLVEINGIVHEFVL----PPYDGQFF----YPTYGLVLSCYSA 666
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 215/437 (49%), Gaps = 38/437 (8%)
Query: 8 NSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQ 67
+S L+ T + N + +++ + + L +L++C LVQ KQ+ AQ++ + ++
Sbjct: 36 SSSLSPITKTINWN-TTHSFVRENPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASR 94
Query: 68 LAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNG 126
L +L S ++ Y + +I + F++N IRGY E+G G LY +M+ G
Sbjct: 95 LVAFC-ALSESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGT 153
Query: 127 LDPDSFTYPILLKAC-GDLRQVKGVHSLV-VKSKDFNSVIHSLTRLITFYCNFGDVKSAQ 184
L PD+ TYP+LLK C G G+ L V F I IT + G++ A
Sbjct: 154 LKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAY 213
Query: 185 LLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG 244
+F++ +++VTW +MI G VK+ E I ++++M V NE+T++ ++S+C+ +
Sbjct: 214 DVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQ 273
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC-------------------------- 278
LGK H ++ ++ + L AL DMY KC
Sbjct: 274 DLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVL 333
Query: 279 -----GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVT 333
G+++ A + + EK+V WN+II G G+EA+ +F +MQ+ I+PD VT
Sbjct: 334 GYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVT 393
Query: 334 LIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNM 393
++ L+ACS G ++ G I + + R +K+ +V LVD+ + + A +V +
Sbjct: 394 MVNCLSACSQLGALDVGIWIHHYIER-HKLSIDVALGTALVDMYAKCGNIARALQVFEEI 452
Query: 394 PMEPNAVLWGSLLTACA 410
P + N + W +++ A
Sbjct: 453 P-QRNCLTWTAVICGLA 468
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/479 (33%), Positives = 268/479 (55%), Gaps = 23/479 (4%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQ+H+ I++ + + L + + VF+++ + S ++ +I GY
Sbjct: 289 KQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 107 AE-AGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKACGDL------RQVKGV---HSLVV 155
+ L I L+++MI G ++P+ FT+ KACG+L +QV G L
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
S NSVI + + ++ AQ F+ ++EKN+V++ ++G + N+ +
Sbjct: 407 NSSVANSVI-------SMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
L ++ + + V+ T S+LS AN+G+ G+ +H V K + N + AL MY
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMY 519
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
+KCG I+ A RVF + +NV +W S+I G A HG ++ F QM G+KP++VT +
Sbjct: 520 SKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYV 579
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
A+L+ACSH GL+ +G F +M D+K++P ++HY C+VDLLCRA LL +A+E I MP
Sbjct: 580 AILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPF 639
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
+ + ++W + L AC +N EL ++A ++++L+P Y+ +SNIYA +W+++
Sbjct: 640 QADVLVWRTFLGACRVH---SNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEES 696
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+MRR MKERN+VK GCS IE+ D +H+F VGD HP + +IY L+ + ++ Y
Sbjct: 697 TEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 216/484 (44%), Gaps = 61/484 (12%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL+ C F K VHA++I+ + ++ L L +S++ +
Sbjct: 68 LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG--DLRQVKGV 150
+++ ++ Y G I+++ + + GL P+ + Y +++AC D V V
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 151 H-SLVVKSKDFNSVIHSLTRLITFYCNF-GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
++K+ F S + LI + ++A +FD+M+E NVVTWT MI ++
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
RE I F M SG E ++ TL SV SACA L LGK +H + ++ ++ D +
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV--DDVE 305
Query: 269 AALTDMYAKC---GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC--GEEAVKMFWQMQ 323
+L DMYAKC G +++ +VF + + +V +W ++I G + C EA+ +F +M
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY-MKNCNLATEAINLFSEMI 364
Query: 324 MSG-IKPDDVTLIAVLTACSHAGLIEKGKEIF---------------------------- 354
G ++P+ T + AC + GK++
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM 424
Query: 355 YNMRRDYK--VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP---MEPNAVLWGSLLTAC 409
+ +R ++ E N+ Y +D CR ++A++++ + + +A + SLL+
Sbjct: 425 EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGV 484
Query: 410 ASADDGANVELAEIAMERLIKL-----EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
A+ ++ E +++KL +P + + ++Y+ D A ++ M+
Sbjct: 485 ANV---GSIRKGEQIHSQVVKLGLSCNQPVCNA----LISMYSKCGSIDTASRVFNFMEN 537
Query: 465 RNIV 468
RN++
Sbjct: 538 RNVI 541
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 134/287 (46%), Gaps = 16/287 (5%)
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVE-VNELTLVSVLSACANLGASELGKWVHEFVNKN 259
+I H+ + R + M G+ ++ +T S+L +C LGK VH + +
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVL---EKNVCTWNSIIGGLAIHGCGEEAV 316
I + L +L +Y+K G +A VF+ + +++V +W++++ +G +A+
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC-LVD 375
K+F + G+ P+D AV+ ACS++ + G+ + + E +V GC L+D
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV-CVGCSLID 210
Query: 376 LLCRAR-LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
+ + + AY+V M E N V W ++T C G E ++ + L F
Sbjct: 211 MFVKGENSFENAYKVFDKMS-ELNVVTWTLMITRCMQM--GFPREAIRFFLDMV--LSGF 265
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMK---ERNIVKNPGCSVIEI 478
+ L S++++A A+ ++ ++L +V + CS++++
Sbjct: 266 ESDKFTL-SSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDM 311
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 274/467 (58%), Gaps = 11/467 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+QVHA++I A + T +L+ V + A V +++ S ++ T+I GY
Sbjct: 30 RQVHARMITARYRPAVFLGT---RLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGY 86
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSV 163
++ + L+ +M+ G P+ +T +L +C + Q K VHSL+VK+ +F S
Sbjct: 87 SQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKT-NFESH 145
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ + L+ Y +++ A+ +FD + E++VV+ TA+I+G+ ++ E +DLFR++
Sbjct: 146 MFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYS 205
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
G++ N +T ++++A + L + + GK VH + + + L +L DMY+KCG +
Sbjct: 206 EGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLY 265
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
+ RVF +LE++V +WN+++ G HG G E + +F + +KPD VTL+AVL+ CSH
Sbjct: 266 SRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSH 324
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
GL+++G +IF + ++ + HYGC++DLL R+ L++A +I NMP E +WG
Sbjct: 325 GGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWG 384
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
SLL AC ANV + E+ ++L+++EP N GNYV++SNIYAA W D K+R+LM
Sbjct: 385 SLLGACRVH---ANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLML 441
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
E+ + K PG S I ++ V+H F + HP ++I + ++ + + ++
Sbjct: 442 EKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIK 488
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 152/276 (55%), Gaps = 6/276 (2%)
Query: 134 YPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
Y + AC + R + + VH+ ++ ++ + + TRL+T Y G + A+ + D+M
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITAR-YRPAVFLGTRLVTMYVRCGALDDARNVLDRM 71
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
E++VV+WT MI+G+ + + + E +DLF KM +G NE TL +VL++C+ + GK
Sbjct: 72 PERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGK 131
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
VH + K + +G++L DMYAK I+EA RVF + E++V + +II G A G
Sbjct: 132 QVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKG 191
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
EEA+ +F Q+ G++ + VT ++TA S ++ GK++ + R ++ V
Sbjct: 192 LDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRK-ELPFFVALQ 250
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
L+D+ + L + V NM +E + V W ++L
Sbjct: 251 NSLIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAML 285
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/488 (33%), Positives = 272/488 (55%), Gaps = 41/488 (8%)
Query: 53 IIKASFDNRTISD-TQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGL 111
I K FD T+ + + LI + S Q A F ++ + ++N++I GY++ G
Sbjct: 195 IAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGY 254
Query: 112 GHRGIQLYTQMIGN-GLDPDSFTYPILLKACGDLRQV---KGVHSLVVKS---------- 157
+ ++++M+ L PD+FT +L AC +L ++ K +H+ ++++
Sbjct: 255 NLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGN 314
Query: 158 ----------------------KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
+ N I + T L+ Y G+VK A+ +F+++ +++V
Sbjct: 315 ALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDV 374
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V WTAMI G+V+ + + ++LFR M + G E N TL ++LS ++L E GK +H
Sbjct: 375 VAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHAS 434
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSIIGGLAIHGCGEE 314
K + AL MYAK G I A RVF + +K + +W S+I LA HG G+E
Sbjct: 435 AIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKE 494
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+ +F +M G+KPD +T + VL+AC+H GL+E+G++ + M +++EP + HY C++
Sbjct: 495 AINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMI 554
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
DL RA LL EAY I +MP+EP+ + WGSLL +C N +LA++A ERL+ ++P
Sbjct: 555 DLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHK---NADLAKVAAERLLLIDPG 611
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
N G Y+ ++N+Y+A +W++A + R+LMK+R + K G S I I + VH F V D HP
Sbjct: 612 NSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQ 671
Query: 495 SEEIYSML 502
+EIY ++
Sbjct: 672 KDEIYKLM 679
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 201/489 (41%), Gaps = 109/489 (22%)
Query: 25 NTATKSHHHLPLLQKCTHL---VQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQI 81
N+ T S +LQ + + VH QIIK + + L+ + +
Sbjct: 5 NSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLH---LGVYLMNNLMTFYAKTGSL 61
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAG------------------------------- 110
+AH VF+++ STF++NT+I GYA+ G
Sbjct: 62 RFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFG 121
Query: 111 LGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSL 167
L I ++ +MI + P FT +L +C + + + +HS VVK S +
Sbjct: 122 LFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVK-LGLGSCVPVA 180
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA--------------------------- 200
T L+ Y GD A+++FD+MT KN+ TW A
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIV 240
Query: 201 ----MINGHVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
MI+G+ +Q E + +F KM + ++ + TL S+LSACANL +GK +H +
Sbjct: 241 SWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAY 300
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIE--------------------------------- 282
+ + + +G AL MYAK G +E
Sbjct: 301 ILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVK 360
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A +F + +++V W ++I G +G +A+++F M G +P+ TL A+L+ S
Sbjct: 361 PAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSS 420
Query: 343 HAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
++E GK+I + ++ P+V + L+ + + ++ A V + V
Sbjct: 421 SLTILEHGKQIHASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNGKKEIVS 478
Query: 402 WGSLLTACA 410
W S++ A A
Sbjct: 479 WTSMIMALA 487
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 152/331 (45%), Gaps = 42/331 (12%)
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
S LI+ Y G+ + ++ L +M + + V+WTA+I G+ + + I +F KM
Sbjct: 78 SWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISER 137
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC------- 278
V ++ T+ +VLS+CA ++G+ +H FV K + + +L +MYAKC
Sbjct: 138 VPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAK 197
Query: 279 ------------------------GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
G E A F+ + ++++ +WNS+I G + G E
Sbjct: 198 VVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLE 257
Query: 315 AVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGC 372
A+ +F +M +KPD+ TL ++L+AC++ + GK+I Y +R + + V +
Sbjct: 258 ALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGN--A 315
Query: 373 LVDLLCRARLLDEAYEVIR-NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
L+ + ++ ++ A ++ N N + + SLL D + + A E KL
Sbjct: 316 LISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLL------DGYTKLGNVKPAREIFNKL 369
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
+ + M Y W+DA ++ RLM
Sbjct: 370 RDRDVVAWTAMIVGYVQNGLWNDALELFRLM 400
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/282 (50%), Positives = 192/282 (68%), Gaps = 3/282 (1%)
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
+ +L ACA++ A E GK VH + K L+ + L DMY KCG IE+A VF +L
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 293 EKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKE 352
E +V +WN++I GLA HGCG+EAV +F QM +G+KP+ +T + VL+ CSHAGL+++G+
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120
Query: 353 IFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASA 412
F +M RD+ + P +HY C+VDL RA LDEA I MP+EPNA +WGSLL AC
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180
Query: 413 DDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
N+ELAE A+E+LI+L P N G YVL+SNIYAA +WDDAGK+R++MK+R++ K PG
Sbjct: 181 ---GNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPG 237
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
CS IE+ + VH F+VGD HP EEIY LE + + ++ Y
Sbjct: 238 CSWIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGY 279
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 120/237 (50%), Gaps = 10/237 (4%)
Query: 137 LLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK 193
+L+AC L Q K VH+ ++K F + L+ Y G ++ AQ +F ++ E
Sbjct: 4 ILRACASVAALEQGKQVHADIIKI-GFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEP 62
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK-WV 252
+V +W AMI+G + +E + LF +M +GV+ N++T V VLS C++ G + G+ +
Sbjct: 63 DVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYF 122
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR-VFKIVLEKNVCTWNSIIGGLAIHGC 311
+ I + + + D++ + G ++EAL + ++ +E N W S++G +HG
Sbjct: 123 DSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGN 182
Query: 312 GEEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR-RDYKVEPN 366
E A + Q+ +++ P L++ + A AG + ++ M+ R K EP
Sbjct: 183 IELAERAVEQLIELTPENPGTYVLLSNIYAA--AGRWDDAGKVRKMMKDRSVKKEPG 237
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 54/269 (20%)
Query: 43 LVQFKQVHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
L Q KQVHA IIK F+ + ++S+ L++ +I A VF++++ P ++N
Sbjct: 14 LEQGKQVHADIIKIGFELDVSVSN----GLVDMYGKCGRIEDAQEVFSKLLEPDVASWNA 69
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFN 161
+I G A+ G G + L+ QM+ G+ P+ T+ ++L C
Sbjct: 70 MISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCS------------------- 110
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVT-----WTAMINGHVKQKNYREGID 216
+ G V + FD MT + ++ ++ M++ + E ++
Sbjct: 111 --------------HAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALN 156
Query: 217 LFRKMRDSGVEVNELTLVSVLSACANLGASELG-KWVHEFVNKNCIILNDKLGAALTDMY 275
+M VE N S+L AC G EL + V + + N L+++Y
Sbjct: 157 FINQMP---VEPNASVWGSLLGACRVHGNIELAERAVEQLI--ELTPENPGTYVLLSNIY 211
Query: 276 AKCGYIEEALRVFKIVLEKNV-----CTW 299
A G ++A +V K++ +++V C+W
Sbjct: 212 AAAGRWDDAGKVRKMMKDRSVKKEPGCSW 240
>gi|297737119|emb|CBI26320.3| unnamed protein product [Vitis vinifera]
Length = 522
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 180/495 (36%), Positives = 269/495 (54%), Gaps = 72/495 (14%)
Query: 28 TKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL- 86
+ +H L LL+KC L KQVHA +I T +++ L+ SS I + H
Sbjct: 7 SSNHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRI------LLISSTIVFTHAL 60
Query: 87 -VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR 145
+FN I N P F Y L+ + +++
Sbjct: 61 SIFNHIPN-----------------------------------PTIFLYNTLISSLANIK 85
Query: 146 QVKGVHSLVVKSKDFNSVIHSLTRL--ITFYCNFGDVKSAQLL-FDQMTEKNVVTWTAMI 202
H+ + S + H+ + TF F S L D K+V+T
Sbjct: 86 P----HTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHDIFLIKSVLT----- 136
Query: 203 NGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCII 262
LF +M+ S ++ NE+TLV+++SACA LGA G W H +V K+ +
Sbjct: 137 --------------LFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLK 182
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
LN +G AL DMY+KCG ++ A ++F + ++ +N++IGG AIHG G +A+ +F +M
Sbjct: 183 LNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKM 242
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
+ G+ PDDVTL+ + +CSH GL+E+G ++F +M+ Y VEP ++HYGCLVDLL RA
Sbjct: 243 TLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGR 302
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLM 442
L EA E + NMPM+PNAV+W SLL A A N+E+ E+ ++ LI+LEP GNYVL+
Sbjct: 303 LREAEERVLNMPMKPNAVIWRSLLGA---ARVHGNLEIGEVVLKHLIQLEPETSGNYVLL 359
Query: 443 SNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
SN+YA+ +WDD ++R+LMK+ I K PG S++E+ +HEF++GD HP S+EIY L
Sbjct: 360 SNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKL 419
Query: 503 EYVAISLREECYAAR 517
E ++ L E + R
Sbjct: 420 EEMSRRLHEYGHKPR 434
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 290/532 (54%), Gaps = 94/532 (17%)
Query: 35 PLLQKCTHLVQFKQVHAQIIKASFDNRTISD-TQLAKLI--ESLVNSSQIAYAHLVFNQI 91
P ++C L KQ+HA + F +SD ++L +L+ ++ IA+A+LVF+QI
Sbjct: 13 PAWRRCRSLRHIKQMHAVMALRGF----LSDPSELRELLFASAVAVRGAIAHAYLVFDQI 68
Query: 92 INPSTFAFNTVIRGYAEA---------------------------------------GLG 112
P F +NT+IRG A G G
Sbjct: 69 PRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAG 128
Query: 113 HRGIQLYTQMIGNGLDPDSFTYPILL---KACGDLRQVKGVHSLVVKSKD------FNSV 163
G+Q++ ++ G + D+F L+ +CG+L G+ + + + ++++
Sbjct: 129 DTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNL----GIAAALFDGRAREDAVAWSAM 184
Query: 164 IHSLTR------------------------LITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
I R +IT Y GD+ A+ LFDQ+ E++VV+W
Sbjct: 185 ITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWN 244
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVH----EF 255
MI+G+V+ ++ ++LF +M+ G + + +T++S+LSACA+ G ++G+ +H +
Sbjct: 245 VMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDM 304
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
++N + LG AL DMYAKCG ++ A VF + +K+V TWNSI+GGLA+HG E+
Sbjct: 305 FSRNGFPV--VLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLES 362
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
+ MF +M ++PD++T +AVL ACSH G+++KG+E F M+ Y+VEPN+KHYGC+VD
Sbjct: 363 IDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVD 422
Query: 376 LLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN 435
+L RA LL EA+E I M EPN+V+W +LL+AC +ELA+ A +L+K
Sbjct: 423 MLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVH---GEIELAKHANRQLLKARNDE 479
Query: 436 DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE--INDVVHEF 485
G+YVL+SNIYA+ +W + KMR+LM + + K G + ++ + D++ F
Sbjct: 480 SGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNKEAGQTFVDGSVKDIIQSF 531
>gi|334183024|ref|NP_174678.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806500|sp|Q9FX24.2|PPR71_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g34160
gi|332193557|gb|AEE31678.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 274/492 (55%), Gaps = 20/492 (4%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
++QKC Q KQ+ + + A + ++L + ++ +++A +F I P
Sbjct: 9 MIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERC-AISPFGDLSFAVQIFRYIPKPL 67
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP------DSFTYPILLKACGDLRQVKG 149
T +N +IRG+A + Y M+ D+ T LKAC
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 150 VHSLVVKSKDFNSVIHSL--TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ L + SL T L+ Y GD+ SA LFD+M ++V +W A+I G V
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWV-HEFVNKNCIILNDK 266
E ++L+++M G+ +E+T+V+ L AC++LG + G+ + H + N N I+ N
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSN-- 245
Query: 267 LGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
A DMY+KCG++++A +VF + +K+V TWN++I G A+HG A+++F +++ +
Sbjct: 246 ---AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDN 302
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
GIKPDDV+ +A LTAC HAGL+E G +F NM VE N+KHYGC+VDLL RA L E
Sbjct: 303 GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLRE 361
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
A+++I +M M P+ VLW SLL A D VE+AEIA + ++ NDG++VL+SN+
Sbjct: 362 AHDIICSMSMIPDPVLWQSLLGASEIYSD---VEMAEIASREIKEMGVNNDGDFVLLSNV 418
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
YAA+ +W D G++R M+ + + K PG S IE +HEF D H EIY ++ +
Sbjct: 419 YAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEI 478
Query: 506 AISLREECYAAR 517
+RE+ Y A+
Sbjct: 479 RFKIREDGYVAQ 490
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 273/478 (57%), Gaps = 14/478 (2%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
++ C L+ K++H +++++ F + + L++ + A VF QI
Sbjct: 213 VISSCARLLDLERGKEIHMELVRSGF---ALDGFVSSALVDMYGKCGCLEMAKEVFEQIQ 269
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKG 149
+ ++N++I GY+ G I+L+ +M G+ P T +L AC +L+ K
Sbjct: 270 RKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKF 329
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H +++++ + I + LI Y G++ SA+ +F M + NVV+W MI+G+VK
Sbjct: 330 IHGYIIRNR-VEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVG 388
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
+Y E + +F MR +GV+ + +T SVL AC+ L E GK +H F+ ++ + +N+ +
Sbjct: 389 SYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMG 448
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMYAKCG ++EAL +F + E++ +W S+I HG EA+K+F +MQ S KP
Sbjct: 449 ALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKP 508
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D VT +A+L+ACSHAGL+++G F M +Y +P V+HY CL+DLL R L EAYE+
Sbjct: 509 DKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEI 568
Query: 390 IRNMP-MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
++ P + + L +L +AC ++L E LI+ +P + Y+++SN+YA+
Sbjct: 569 LQRTPDIREDVGLLSTLFSACHLHK---KLDLGEQIGRLLIEKDPDDPSTYIILSNMYAS 625
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
+WD+ K+R +KE + KNPGCS IE+ +H F+V D HP ++ IY + +A
Sbjct: 626 VKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILA 683
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 203/383 (53%), Gaps = 14/383 (3%)
Query: 34 LPLLQKCT---HLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQ 90
L LL+ C +L Q K +H +I+ N T LI + A LVF
Sbjct: 7 LSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNI---TLCKSLINLYFSCHLFQSAKLVFQT 63
Query: 91 IINPSTFA-FNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKACGDLRQV- 147
I NP +N ++ + + G++++ +++ L PD+FTYP +LKAC L +V
Sbjct: 64 IENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVG 123
Query: 148 --KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
K VH+ V+KS F + ++ + Y + A LFD+M E++V +W +I+ +
Sbjct: 124 YGKMVHTHVIKS-GFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCY 182
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ + ++LF +M+ SG + + +TL +V+S+CA L E GK +H + ++ L+
Sbjct: 183 YQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDG 242
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
+ +AL DMY KCG +E A VF+ + KNV +WNS+I G ++ G + +++F +M
Sbjct: 243 FVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEE 302
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
GI+P TL ++L ACS + ++ GK I + R+ +VE ++ L+DL + +
Sbjct: 303 GIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRN-RVEADIFVNSSLIDLYFKCGNIGS 361
Query: 386 AYEVIRNMPMEPNAVLWGSLLTA 408
A V +NMP + N V W +++
Sbjct: 362 AENVFQNMP-KTNVVSWNVMISG 383
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVL 292
L+S+L C + + GK +H+ + + N L +L ++Y C + A VF+ +
Sbjct: 6 LLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIE 65
Query: 293 EK-NVCTWNSIIGGLAIHGCGEEAVKMFWQ-MQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
++ WN ++ + E +++F + + +KPD T +VL ACS G + G
Sbjct: 66 NPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYG 125
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
K + ++ + +V V + + + ++A ++ MP E + W ++++
Sbjct: 126 KMVHTHVIKS-GFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMP-ERDVASWNNVIS 180
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 275/494 (55%), Gaps = 19/494 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-------KLIESLVNSSQIAYAHL 86
LPLL + L Q VHA I+A + S ++L L++ + YA
Sbjct: 235 LPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 294
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL---DPDSFTYPILLKACGD 143
VF+ + + ++ +I G+ + L+ M+ GL P S L+AC
Sbjct: 295 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASA--LRACAS 352
Query: 144 L---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
L R + +H+L+ KS ++ + + L++ Y G + A LFD+M K+ V+++A
Sbjct: 353 LDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 411
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
+++G+V+ E +F+KM+ VE + T+VS++ AC++L A + G+ H V
Sbjct: 412 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 471
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ + AL DMYAKCG I+ + +VF ++ +++ +WN++I G IHG G+EA +F
Sbjct: 472 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 531
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M G PD VT I +L+ACSH+GL+ +GK F+ MR Y + P ++HY C+VDLL R
Sbjct: 532 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRG 591
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
LDEAYE I++MP+ + +W +LL AC N++L + + +L P GN+V
Sbjct: 592 GFLDEAYEFIQSMPLRADVRVWVALLGACRVYK---NIDLGKKVSRMIQELGPEGTGNFV 648
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYS 500
L+SNIY+A ++D+A ++R + K + K+PGCS IEIN +H F+ GD HP S EIY
Sbjct: 649 LLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYR 708
Query: 501 MLEYVAISLREECY 514
L+ + + +++ Y
Sbjct: 709 ELDNILVGIKKLGY 722
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 185/392 (47%), Gaps = 27/392 (6%)
Query: 37 LQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L+ C+ L + +H I A T L++ V + + A +F +
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVST---ALLDMYVKCACLPDAAHIFATMPA 188
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQ--LYTQMIGNGLDPDSFTYPILLKAC---GDLRQVK 148
A+N ++ GYA G+ H + L QM + L P++ T LL G L Q
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248
Query: 149 GVHSLVV----------KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
VH+ + KSK + V+ T L+ Y G + A+ +FD M +N VTW
Sbjct: 249 SVHAYRIRACLHSNRNSKSKLTDGVLLG-TALLDMYAKCGSLLYARRVFDAMPARNEVTW 307
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGV-EVNELTLVSVLSACANLGASELGKWVHEFVN 257
+A+I G V + LF+ M G+ ++ ++ S L ACA+L +G+ +H +
Sbjct: 308 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLA 367
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
K+ + + G +L MYAK G I++A+ +F + K+ ++++++ G +G EEA
Sbjct: 368 KSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFL 427
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCLVDL 376
+F +MQ ++PD T+++++ ACSH ++ G+ + + R E ++ L+D+
Sbjct: 428 VFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI--CNALIDM 485
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+ +D + +V MP + V W +++
Sbjct: 486 YAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAG 516
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 166/351 (47%), Gaps = 21/351 (5%)
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAG--LGHRGIQLYTQMIGNGLDPDSFT 133
+ S ++ AH +F+QI +P +N +IR Y+ + G+ LY +M+ + + P+++T
Sbjct: 68 IASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYT 127
Query: 134 YPILLKACGDLRQ---VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
+P LKAC L + +H + + + + T L+ Y + A +F M
Sbjct: 128 FPFALKACSALADHHCGRAIHRHAIHA-GLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 191 TEKNVVTWTAMINGHVKQKNYREGID--LFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
+++V W AM+ G+ Y + L +M+ + N TLV++L A GA
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 249 GKWVHEFVNKNCIILNDK----------LGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
G VH + + C+ N LG AL DMYAKCG + A RVF + +N T
Sbjct: 247 GTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIA-VLTACSHAGLIEKGKEIFYNM 357
W+++IGG + +A +F M G+ T IA L AC+ + G+++ + +
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQL-HAL 365
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
V ++ L+ + +A L+D+A + M ++ + V + +L++
Sbjct: 366 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSG 415
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 253/439 (57%), Gaps = 28/439 (6%)
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK 139
++ A +F+++ + ++N++I GY GL +G+ L+ QM+ G++ D
Sbjct: 200 RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTD--------- 250
Query: 140 ACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWT 199
+ ++V N+ L+ Y G++ SA +F+ M E++VV+WT
Sbjct: 251 ----------LATMVSVELTLNNC------LLDMYSKSGNLNSAIQVFETMGERSVVSWT 294
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
+MI G+ ++ + LF +M + N +T+ +L ACA+L A E G+ +H + +N
Sbjct: 295 SMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRN 354
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
L+ + AL DMY KCG + A +F ++ EK++ +W +I G +HG G EA+ F
Sbjct: 355 GFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAF 414
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
+M+ SGI+PD+V+ I++L ACSH+GL+++G F MR + +EP +HY C+VDLL R
Sbjct: 415 NEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLAR 474
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNY 439
A L +AY+ I+ MP+EP+A +WG+LL C D V+LAE E + +LEP N G Y
Sbjct: 475 AGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHD---VKLAEKVAEHVFELEPENTGYY 531
Query: 440 VLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
VL++NIYA +W++ K+R + R + KNPGCS IEI VH F+ GD HP + +I
Sbjct: 532 VLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIE 591
Query: 500 SMLEYVAISLREECYAARM 518
+L+ ++EE + +M
Sbjct: 592 LLLKKTRTRMKEEGHFPKM 610
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 191/392 (48%), Gaps = 72/392 (18%)
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV- 147
++ I+ +N I + E G R ++L Q D + TY +L+ C DL+ +
Sbjct: 61 SETIDCKITDYNIEICRFCELGNLRRAMELINQ--SPKPDLELRTYCSVLQLCADLKSIQ 118
Query: 148 --KGVHSLVVKSKDF--NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
+ +HS +++S D + V+ S +L+ Y GD++ + +FD++ + V W ++N
Sbjct: 119 DGRRIHS-IIQSNDVEVDGVLGS--KLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMN 175
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNE--------------LTLVSVLSACANLGASELG 249
G+ K N+RE + LF++MR+ G+ E ++ S++S + G SE G
Sbjct: 176 GYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKG 235
Query: 250 KWVHE-----FVNKNC---IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
+ E +N + + + L L DMY+K G + A++VF+ + E++V +W S
Sbjct: 236 LDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTS 295
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRD 360
+I G A G + +V++F +M+ + P+ +T+ +L AC+ +E+G+EI + +R
Sbjct: 296 MIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNG 355
Query: 361 YKVEPNVKHYGCLVDLLCR------ARLLDE----------------------------A 386
+ ++ +V + LVD+ + ARLL + A
Sbjct: 356 FSLDRHVAN--ALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAA 413
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASA---DDG 415
+ +RN +EP+ V + S+L AC+ + D+G
Sbjct: 414 FNEMRNSGIEPDEVSFISILYACSHSGLLDEG 445
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 126/244 (51%), Gaps = 6/244 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
L++ S + A VF + S ++ ++I GYA GL ++L+ +M L P+
Sbjct: 265 LLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPN 324
Query: 131 SFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
S T +L AC L + + +H ++++ F+ H L+ Y G + A+LLF
Sbjct: 325 SITMACILPACASLAALERGQEIHGHILRN-GFSLDRHVANALVDMYLKCGALGLARLLF 383
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
D + EK++V+WT MI G+ E I F +MR+SG+E +E++ +S+L AC++ G +
Sbjct: 384 DMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLD 443
Query: 248 LGKWVHEFVNKNCII-LNDKLGAALTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSIIGG 305
G + NC I + A + D+ A+ G + +A + K++ +E + W +++ G
Sbjct: 444 EGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 503
Query: 306 LAIH 309
I+
Sbjct: 504 CRIY 507
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LP L + +++H I++ F +R +++ L++ + + A L+F+ I
Sbjct: 332 LPACASLAALERGQEIHGHILRNGFSLDRHVANA----LVDMYLKCGALGLARLLFDMIP 387
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKG 149
++ +I GY G G I + +M +G++PD ++ +L AC G L + G
Sbjct: 388 EKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWG 447
Query: 150 VHSLV-------VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAM 201
+++ KS+ + ++ L R G++ A M E + W A+
Sbjct: 448 FFNMMRNNCCIEPKSEHYACIVDLLARA-------GNLSKAYKFIKMMPIEPDATIWGAL 500
Query: 202 ING 204
+ G
Sbjct: 501 LCG 503
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/479 (33%), Positives = 268/479 (55%), Gaps = 23/479 (4%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQ+H+ I++ + + L + + VF+++ + S ++ +I GY
Sbjct: 289 KQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 107 AE-AGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKACGDL------RQVKGV---HSLVV 155
+ L I L+++MI G ++P+ FT+ KACG+L +QV G L
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 156 KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGI 215
S NSVI + + ++ AQ F+ ++EKN+V++ ++G + N+ +
Sbjct: 407 NSSVANSVI-------SMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMY 275
L ++ + + V+ T S+LS AN+G+ G+ +H V K + N + AL MY
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMY 519
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
+KCG I+ A RVF + +NV +W S+I G A HG ++ F QM G+KP++VT +
Sbjct: 520 SKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYV 579
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
A+L+ACSH GL+ +G F +M D+K++P ++HY C+VDLLCRA LL +A+E I MP
Sbjct: 580 AILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPF 639
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
+ + ++W + L AC +N EL ++A ++++L+P Y+ +SNIYA +W+++
Sbjct: 640 QADVLVWRTFLGACRVH---SNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEES 696
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+MRR MKERN+VK GCS IE+ D +H+F VGD HP + +IY L+ + ++ Y
Sbjct: 697 TEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 216/484 (44%), Gaps = 61/484 (12%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL+ C F K VHA++I+ + ++ L L +S++ +
Sbjct: 68 LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG--DLRQVKGV 150
+++ ++ Y G I+++ + + GL P+ + Y +++AC D V V
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 151 H-SLVVKSKDFNSVIHSLTRLITFYCNF-GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
++K+ F S + LI + ++A +FD+M+E NVVTWT MI ++
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
RE I F M SG E ++ TL SV SACA L LGK +H + ++ ++ D +
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV--DDVE 305
Query: 269 AALTDMYAKC---GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC--GEEAVKMFWQMQ 323
+L DMYAKC G +++ +VF + + +V +W ++I G + C EA+ +F +M
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY-MKNCNLATEAINLFSEMI 364
Query: 324 MSG-IKPDDVTLIAVLTACSHAGLIEKGKEIF---------------------------- 354
G ++P+ T + AC + GK++
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM 424
Query: 355 YNMRRDYK--VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP---MEPNAVLWGSLLTAC 409
+ +R ++ E N+ Y +D CR ++A++++ + + +A + SLL+
Sbjct: 425 EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGV 484
Query: 410 ASADDGANVELAEIAMERLIKL-----EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE 464
A+ ++ E +++KL +P + + ++Y+ D A ++ M+
Sbjct: 485 ANV---GSIRKGEQIHSQVVKLGLSCNQPVCNA----LISMYSKCGSIDTASRVFNFMEN 537
Query: 465 RNIV 468
RN++
Sbjct: 538 RNVI 541
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 134/287 (46%), Gaps = 16/287 (5%)
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVE-VNELTLVSVLSACANLGASELGKWVHEFVNKN 259
+I H+ + R + M G+ ++ +T S+L +C LGK VH + +
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVL---EKNVCTWNSIIGGLAIHGCGEEAV 316
I + L +L +Y+K G +A VF+ + +++V +W++++ +G +A+
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC-LVD 375
K+F + G+ P+D AV+ ACS++ + G+ + + E +V GC L+D
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV-CVGCSLID 210
Query: 376 LLCRAR-LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
+ + + AY+V M E N V W ++T C G E ++ + L F
Sbjct: 211 MFVKGENSFENAYKVFDKMS-ELNVVTWTLMITRCMQM--GFPREAIRFFLDMV--LSGF 265
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMK---ERNIVKNPGCSVIEI 478
+ L S++++A A+ ++ ++L +V + CS++++
Sbjct: 266 ESDKFTL-SSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDM 311
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 276/471 (58%), Gaps = 11/471 (2%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
L + +QVHA++I A + T +L+ V + A V +++ S ++ T+
Sbjct: 26 LWEGRQVHARMITARYRPAVFLGT---RLVTMYVRCGALDDARNVLDRMPERSVVSWTTM 82
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKD 159
I GY++ + L+ +M+ G P+ +T +L +C + Q K VHSL+VK+ +
Sbjct: 83 ISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKT-N 141
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
F S + + L+ Y +++ A+ +FD + E++VV+ TA+I+G+ ++ E +DLFR
Sbjct: 142 FESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFR 201
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
++ G++ N +T ++++A + L + + GK VH + + + L +L DMY+KCG
Sbjct: 202 QLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCG 261
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
+ + RVF +LE++V +WN+++ G HG G E + +F + +KPD VTL+AVL+
Sbjct: 262 KLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLS 320
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
CSH GL+++G +IF + ++ + HYGC++DLL R+ L++A +I NMP E
Sbjct: 321 GCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTP 380
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
+WGSLL AC ANV + E+ ++L+++EP N GNYV++SNIYAA W D K+R
Sbjct: 381 SIWGSLLGACRVH---ANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVR 437
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+LM E+ + K PG S I ++ V+H F + HP ++I + ++ + + ++
Sbjct: 438 KLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIK 488
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 152/276 (55%), Gaps = 6/276 (2%)
Query: 134 YPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
Y + AC + R + + VH+ ++ ++ + + TRL+T Y G + A+ + D+M
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITAR-YRPAVFLGTRLVTMYVRCGALDDARNVLDRM 71
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
E++VV+WT MI+G+ + + + E +DLF KM +G NE TL +VL++C+ + GK
Sbjct: 72 PERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGK 131
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
VH + K + +G++L DMYAK I+EA RVF + E++V + +II G A G
Sbjct: 132 QVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKG 191
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
EEA+ +F Q+ G++ + VT ++TA S ++ GK++ + R ++ V
Sbjct: 192 LDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRK-ELPFFVALQ 250
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
L+D+ + L + V NM +E + V W ++L
Sbjct: 251 NSLIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAML 285
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 276/471 (58%), Gaps = 11/471 (2%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTV 102
L + +QVHA++I A + T +L+ V + A V +++ S ++ T+
Sbjct: 58 LWEGRQVHARMITARYRPAVFLGT---RLVTMYVRCGALDDARNVLDRMPERSVVSWTTM 114
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKD 159
I GY++ + L+ +M+ G P+ +T +L +C + Q K VHSL+VK+ +
Sbjct: 115 ISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKT-N 173
Query: 160 FNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFR 219
F S + + L+ Y +++ A+ +FD + E++VV+ TA+I+G+ ++ E +DLFR
Sbjct: 174 FESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFR 233
Query: 220 KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCG 279
++ G++ N +T ++++A + L + + GK VH + + + L +L DMY+KCG
Sbjct: 234 QLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCG 293
Query: 280 YIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLT 339
+ + RVF +LE++V +WN+++ G HG G E + +F + +KPD VTL+AVL+
Sbjct: 294 KLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLS 352
Query: 340 ACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
CSH GL+++G +IF + ++ + HYGC++DLL R+ L++A +I NMP E
Sbjct: 353 GCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTP 412
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
+WGSLL AC ANV + E+ ++L+++EP N GNYV++SNIYAA W D K+R
Sbjct: 413 SIWGSLLGACRVH---ANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVR 469
Query: 460 RLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
+LM E+ + K PG S I ++ V+H F + HP ++I + ++ + + ++
Sbjct: 470 KLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIK 520
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 152/276 (55%), Gaps = 6/276 (2%)
Query: 134 YPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
Y + AC + R + + VH+ ++ ++ + + TRL+T Y G + A+ + D+M
Sbjct: 45 YEAAITACIERRALWEGRQVHARMITAR-YRPAVFLGTRLVTMYVRCGALDDARNVLDRM 103
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK 250
E++VV+WT MI+G+ + + + E +DLF KM +G NE TL +VL++C+ + GK
Sbjct: 104 PERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGK 163
Query: 251 WVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
VH + K + +G++L DMYAK I+EA RVF + E++V + +II G A G
Sbjct: 164 QVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKG 223
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
EEA+ +F Q+ G++ + VT ++TA S ++ GK++ + R ++ V
Sbjct: 224 LDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRK-ELPFFVALQ 282
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
L+D+ + L + V NM +E + V W ++L
Sbjct: 283 NSLIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAML 317
>gi|222642150|gb|EEE70282.1| hypothetical protein OsJ_30444 [Oryza sativa Japonica Group]
Length = 1082
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 254/435 (58%), Gaps = 25/435 (5%)
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD-PDSFTYPILLKACGDLRQVKGVH 151
+P+TF++N+ IR A H I LY M+ + P+++TYP LL AC L
Sbjct: 50 HPTTFSYNSAIRALARGPRPHLAISLYRSMLSHSRSHPNNYTYPPLLAACARLADSDSSS 109
Query: 152 -------SLVVKSKDFNSVIHSLTR-----LITFYCNFGDVKSAQLLFD--QMTEKNVVT 197
+ + + F + S R L++ Y GD+ +A+ +FD +++
Sbjct: 110 AAAAAAAGVALHASLFRRGLESPDRFIRASLLSLYAAAGDLPAARQVFDLSPPNHRDLPL 169
Query: 198 WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
W ++++ ++ + +Y + + LFR MR + + +TL+++LSACA+LGA +W H ++
Sbjct: 170 WNSLLHAYLSRAHYVQVLRLFRTMRTA----DHVTLLALLSACAHLGALHTARWAHAYLA 225
Query: 258 KNC-IILNDKLGAALTDMYAKCGYIEEALRVF--KIVLEKNVCTWNSIIGGLAIHGCGEE 314
C + L AL +MY +CG ++ A +F K+V TW +I GLA++G +
Sbjct: 226 TTCSFPITTNLATALLNMYMRCGDVQTACSLFHSTPTRHKDVHTWTVMIAGLALNGFSTD 285
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+ +F M+ I+PD VTL AVL+AC+HAG++++GK I M DY ++P ++HYGC V
Sbjct: 286 ALHLFTHMKDHNIQPDSVTLTAVLSACTHAGMVDEGKRILRRMPLDYHLQPTIEHYGCTV 345
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
DLL RA LL+EA +IR +P + + LWG+LL AC N E+ ++ +++L+P
Sbjct: 346 DLLGRAGLLEEALALIRAVPFKADVALWGALLVACRCH---RNFEMGQMVAMEILRLDPQ 402
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+ G +V +SN+YAA +WD ++R MK+ I K PG SV+E++ VV+EF+ GD HP
Sbjct: 403 HAGAWVFLSNVYAAAGKWDLVQEVRSSMKQHRIHKPPGSSVVELDGVVYEFLSGDHSHPQ 462
Query: 495 SEEIYSMLEYVAISL 509
S++IY+ML+ + +L
Sbjct: 463 SDQIYAMLDEIGKTL 477
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/489 (34%), Positives = 275/489 (56%), Gaps = 15/489 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP + + L K +H ++ SFDN + T L++ + YA +F+ +
Sbjct: 217 LPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT---GLLDMYAKCQCLLYARKIFDVMGV 273
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDPDSFTYPILLKACG---DLRQVKG 149
+ +++ +I GY + ++L+ QMI + +DP T +L+AC DL + +
Sbjct: 274 RNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRK 333
Query: 150 VHSLVVKSKDFNSVIHSL--TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+H ++K SV+ L L++ Y G + A FD+M K+ V+++A+++G V+
Sbjct: 334 LHCYIIK---LGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQ 390
Query: 208 QKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
N + +FR M+ SG++ + T++ VL AC++L A + G H ++ + +
Sbjct: 391 NGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLI 450
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
AL DMY+KCG I A VF + ++ +WN++I G IHG G EA+ +F + G+
Sbjct: 451 CNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGL 510
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
KPDD+T I +L++CSH+GL+ +G+ F M RD+ + P ++H C+VD+L RA L+DEA+
Sbjct: 511 KPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAH 570
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
IRNMP EP+ +W +LL+AC N+EL E +++ L P + GN+VL+SNIY+
Sbjct: 571 HFIRNMPFEPDVRIWSALLSACRIHK---NIELGEEVSKKIQSLGPESTGNFVLLSNIYS 627
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
A +WDDA +R K+ + K PGCS IEIN +VH F+ GD H +I LE + +
Sbjct: 628 AAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLV 687
Query: 508 SLREECYAA 516
++ Y A
Sbjct: 688 EMKRLGYQA 696
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 204/408 (50%), Gaps = 14/408 (3%)
Query: 33 HLPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQ-LAKLIESLVNSSQIAYAHLVF 88
+L LL+ C L + K++H +K N + +D+ L KL ++ +Q+ A +F
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLK----NTSNADSSVLHKLTRLYLSCNQVVLARRLF 66
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK 148
++I NPS +N +IR YA G I LY M+ G+ P+ +TYP +LKAC L ++
Sbjct: 67 DEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIE 126
Query: 149 GVHSLVVKSKDFN--SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+ +K F S + T L+ FY G + AQ LF M+ ++VV W AMI G
Sbjct: 127 DGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCS 186
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ + L +M++ G+ N T+V VL A GK +H + +
Sbjct: 187 LYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVV 246
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM-S 325
+G L DMYAKC + A ++F ++ +N +W+++IGG C +EA+++F QM +
Sbjct: 247 VGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKD 306
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
+ P VTL +VL AC+ + +G+++ + + V ++ L+ + + ++D+
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSV-LDILLGNTLLSMYAKCGVIDD 365
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
A M ++V + ++++ C + A V L+ M +L ++P
Sbjct: 366 AIRFFDEMN-PKDSVSFSAIVSGCVQNGNAA-VALSIFRMMQLSGIDP 411
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 164/334 (49%), Gaps = 16/334 (4%)
Query: 134 YPILLKAC---GDLRQVKGVHSLVVK--SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
Y LL+AC L + K +H +K S +SV+H LTRL Y + V A+ LFD
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRL---YLSCNQVVLARRLFD 67
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
++ +V+ W +I + + IDL+ M GV N+ T VL AC+ L A E
Sbjct: 68 EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G +H + + + AL D YAKCG + EA R+F + ++V WN++I G ++
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNV 367
+G ++AV++ QMQ GI P+ T++ VL A + GK + Y +RR + + V
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSF--DNGV 245
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
L+D+ + + L A ++ M + N V W +++ ++D E E+ +
Sbjct: 246 VVGTGLLDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGGYVASD--CMKEALELFDQM 302
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
++K D V + ++ A A+ D + R+L
Sbjct: 303 ILK--DAMDPTPVTLGSVLRACAKLTDLSRGRKL 334
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/488 (33%), Positives = 272/488 (55%), Gaps = 41/488 (8%)
Query: 53 IIKASFDNRTISD-TQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGL 111
I K FD T+ + + LI + S Q A F ++ + ++N++I GY++ G
Sbjct: 195 IAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGY 254
Query: 112 GHRGIQLYTQMIGN-GLDPDSFTYPILLKACGDLRQV---KGVHSLVVKS---------- 157
+ ++++M+ L PD+FT +L AC +L ++ K +H+ ++++
Sbjct: 255 NLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGN 314
Query: 158 ----------------------KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
+ N I + T L+ Y G+VK A+ +F+++ +++V
Sbjct: 315 ALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDV 374
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
V WTAMI G+V+ + + ++LFR M + G E N TL ++LS ++L E GK +H
Sbjct: 375 VAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHAS 434
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSIIGGLAIHGCGEE 314
K + AL MYAK G I A RVF + +K + +W S+I LA HG G+E
Sbjct: 435 AIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKE 494
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+ +F +M G+KPD +T + VL+AC+H GL+E+G++ + M +++EP + HY C++
Sbjct: 495 AINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMI 554
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
DL RA LL EAY I +MP+EP+ + WGSLL +C N +LA++A ERL+ ++P
Sbjct: 555 DLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHK---NADLAKVAAERLLLIDPG 611
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
N G Y+ ++N+Y+A +W++A + R+LMK+R + K G S I I + VH F V D HP
Sbjct: 612 NSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQ 671
Query: 495 SEEIYSML 502
+EIY ++
Sbjct: 672 KDEIYKLM 679
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 201/489 (41%), Gaps = 109/489 (22%)
Query: 25 NTATKSHHHLPLLQKCTHL---VQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQI 81
N+ T S +LQ + + VH QIIK + + L+ + +
Sbjct: 5 NSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLH---LGVYLMNNLMTFYAKTGSL 61
Query: 82 AYAHLVFNQIINPSTFAFNTVIRGYAEAG------------------------------- 110
+AH VF+++ STF++NT+I GYA+ G
Sbjct: 62 RFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFG 121
Query: 111 LGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSL 167
L I ++ +MI + P FT +L +C + + + +HS VVK S +
Sbjct: 122 LFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVK-LGLGSCVPVA 180
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA--------------------------- 200
T L+ Y GD A+++FD+MT KN+ TW A
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIV 240
Query: 201 ----MINGHVKQKNYREGIDLFRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
MI+G+ +Q E + +F KM + ++ + TL S+LSACANL +GK +H +
Sbjct: 241 SWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAY 300
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIE--------------------------------- 282
+ + + +G AL MYAK G +E
Sbjct: 301 ILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVK 360
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A +F + +++V W ++I G +G +A+++F M G +P+ TL A+L+ S
Sbjct: 361 PAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSS 420
Query: 343 HAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
++E GK+I + ++ P+V + L+ + + ++ A V + V
Sbjct: 421 SLTILEHGKQIHASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNGKKEIVS 478
Query: 402 WGSLLTACA 410
W S++ A A
Sbjct: 479 WTSMIMALA 487
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 152/331 (45%), Gaps = 42/331 (12%)
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
S LI+ Y G+ + ++ L +M + + V+WTA+I G+ + + I +F KM
Sbjct: 78 SWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISER 137
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC------- 278
V ++ T+ +VLS+CA ++G+ +H FV K + + +L +MYAKC
Sbjct: 138 VPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAK 197
Query: 279 ------------------------GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
G E A F+ + ++++ +WNS+I G + G E
Sbjct: 198 VVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLE 257
Query: 315 AVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGC 372
A+ +F +M +KPD+ TL ++L+AC++ + GK+I Y +R + + V +
Sbjct: 258 ALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGN--A 315
Query: 373 LVDLLCRARLLDEAYEVIR-NMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
L+ + ++ ++ A ++ N N + + SLL D + + A E KL
Sbjct: 316 LISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLL------DGYTKLGNVKPAREIFNKL 369
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
+ + M Y W+DA ++ RLM
Sbjct: 370 RDRDVVAWTAMIVGYVQNGLWNDALELFRLM 400
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 254/455 (55%), Gaps = 40/455 (8%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDPDSFTYPILLKAC- 141
A +F + + S ++N +I GY + GL + ++L+++M+ + + PD FT +L AC
Sbjct: 143 AESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 202
Query: 142 --GDLRQVKGVHSLVVKSK-DFNSVIH-------------------------------SL 167
G++R K VH+ +++++ +NS + S
Sbjct: 203 NLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISF 262
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
T L+ Y GD++SA+ +F M ++VV WTAMI G+ + E IDLFR M G E
Sbjct: 263 TALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPE 322
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
N TL +VLS CA+L + GK +H ++ + + + A+ MYA+ G A R+
Sbjct: 323 PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRM 382
Query: 288 F-KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
F ++ K TW S+I LA HG GEEAV +F +M +G++PD +T + VL+ACSHAG
Sbjct: 383 FDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 442
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+ +GK + ++ ++++ P + HY C+VDLL RA L EA E IR MP+EP+A+ WGSLL
Sbjct: 443 VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 502
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
+AC N ELAE+A E+L+ ++P N G Y ++N+Y+A +W DA ++ + KE+
Sbjct: 503 SACRVHK---NAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKA 559
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSM 501
+ K G S I +H F D HP + +Y+M
Sbjct: 560 VRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 594
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 171/408 (41%), Gaps = 68/408 (16%)
Query: 75 LVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTY 134
S ++A A VF ++ ++ ++ G AG I+ M +G P FT
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 135 PILLKACGDLRQV---KGVHSLVVK----------------------SKDFNSV------ 163
+L +C + + VHS VVK S+ +V
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 164 --IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
+ S +++ + G + A+ LF+ M ++++V+W AMI G+ + + + LF +M
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 222 -RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
+S + +E T+ SVLSACANLG +GK VH ++ + + N ++ AL YAK G
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS 241
Query: 281 IEEALRV---------------------------------FKIVLEKNVCTWNSIIGGLA 307
+E A R+ F ++ ++V W ++I G
Sbjct: 242 VENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYE 301
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
+G +EA+ +F M G +P+ TL AVL+ C+ ++ GK+I R +E +
Sbjct: 302 QNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL-LEQSS 360
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
++ + R+ A + + + W S++ A A G
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 408
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 127/268 (47%), Gaps = 36/268 (13%)
Query: 173 FYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELT 232
+ G + A+ +F +M E++ V+WT M+ G + + E I M G + T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV----- 287
L +VLS+CA A +G+ VH FV K + + ++ +MY KCG E A V
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 288 --------------------------FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQ 321
F+ + ++++ +WN++I G +G +A+K+F +
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 322 M-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCR 379
M S + PD+ T+ +VL+AC++ G + GK++ Y +R + V + L+ +
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN--ALISTYAK 238
Query: 380 ARLLDEAYEVI-RNMPMEPNAVLWGSLL 406
+ ++ A ++ ++M + N + + +LL
Sbjct: 239 SGSVENARRIMDQSMETDLNVISFTALL 266
>gi|297810935|ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319188|gb|EFH49610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1281
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/481 (35%), Positives = 278/481 (57%), Gaps = 48/481 (9%)
Query: 78 SSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPIL 137
+S + YA+ + +++ NP + +N VIRG++ + + I++Y Q++ +G PD TYP L
Sbjct: 801 TSDVNYAYKLLSKLSNPPDYGWNFVIRGFSNSKNPEKSIRVYIQILRSGFSPDHMTYPFL 860
Query: 138 LKACGDL--RQVKG-VHSLVVKSK---DF---NSVIH------------------SLTRL 170
LK+ L R++ G +H VVK+ D N++IH L
Sbjct: 861 LKSSSRLSNREIGGSLHCSVVKTGLEWDLFISNTLIHMYGSFRDKASARKLFDEMPYKNL 920
Query: 171 ITF------YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-RD 223
+T+ Y GDV SA+L+FD+MT ++VVTW++MI+G+VK Y E +++F +M R
Sbjct: 921 VTWNSILDSYAKSGDVVSARLVFDEMTMRDVVTWSSMIDGYVKSGEYNEALEIFDQMMRM 980
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
+ NE+T+VSVL ACA+LG GK VH ++ + L L +L DMYAKCG I +
Sbjct: 981 GSSKANEVTMVSVLCACAHLGELNRGKVVHRYILDVHLPLTVILQTSLIDMYAKCGSIGD 1040
Query: 284 ALRVF--KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
A VF V + + WN++IGGLA HG E++ +F +M+ S I PD++T + +L AC
Sbjct: 1041 AWGVFCGASVKKTDALMWNAMIGGLASHGFIRESLLLFHKMRESEIDPDEITFLCLLAAC 1100
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SH GL+++ F +++ + EP +HY C+VD+L RA L+ +A++ I M ++P +
Sbjct: 1101 SHGGLVKEAWHFFTSLK-ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMLIKPTGSV 1159
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
G+L C + N+ELAE ++LI+L+P NDG YV ++N+YA Q+ A MR
Sbjct: 1160 LGALFNGCI---NHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFGAARSMREA 1216
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR--------EEC 513
M+++ + K G S+I++N H F+ D H S++IY++L+ + + EEC
Sbjct: 1217 MEKKGVKKIAGHSIIKLNGTSHRFIAHDQTHFHSDKIYAVLQLIGTGMNLDVDYDDSEEC 1276
Query: 514 Y 514
+
Sbjct: 1277 H 1277
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 157/370 (42%), Gaps = 30/370 (8%)
Query: 67 QLAKLIESLVNSSQIAYAHLVFNQIIN----PSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
L+ +I+ LV ++++ A + + I+ PS +N +I G + G ++L +M
Sbjct: 441 SLSIVIDCLVKANKVNMAVTLLHDIVQNGLIPSLMMYNNIIEGMCKEGRSEESLKLLAEM 500
Query: 123 IGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSK--DFNSVIHSLTRLITFYCNFGDV 180
G++P +T + + G L+ K + F I T L+ C G
Sbjct: 501 KDAGVEPSQYTLNCIYGCLAERCDFAGALDLLKKMRFYGFEPWIKHTTCLVKKLCENGKA 560
Query: 181 KSAQLLFDQMTE----KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG----VEVNELT 232
A D + +++V++TA I G ++ + G++LFR +G V +
Sbjct: 561 VDACKYIDDVAGEGFLRHMVSYTAAIEGLIRNEGVDRGLELFRDTCANGHCPDVIAYHVL 620
Query: 233 LVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA--ALTDMYAKCGYIEEAL----R 286
+ ++ AC A L +E V+K L + ++ D + K G I+ L R
Sbjct: 621 IKALCKACRTTEADNL---FNEMVSKG---LKPSVATYNSMIDGWCKEGEIDRGLSCIVR 674
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
+++ +V T+ S+I GL EA+ + +M+ P+ +T +A++ + G
Sbjct: 675 MYEDEKNPDVITYTSLIHGLCASRRPSEAISRWNEMKGKDCYPNRITFMALIQGLCNCGW 734
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPME---PNAVLWG 403
+ F M + ++EP+ Y LV + + + + R M + P +V
Sbjct: 735 SSEALVYFREM-EEKEMEPDSAVYLSLVSSFLSSENISAGFGIFREMVHKGRFPVSVDRN 793
Query: 404 SLLTACASAD 413
LL A++D
Sbjct: 794 YLLAVDATSD 803
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 128/294 (43%), Gaps = 36/294 (12%)
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKS 157
F +I G+ + + QL+ +M G++PD Y +L+ + ++ SL ++
Sbjct: 285 TFCVLIHGFVKESRIDKAFQLFEKMRRMGMNPDIALYDVLIGGLCKHKDLEMALSLYLEI 344
Query: 158 KDFNSVIHSLTRLITFYCNFGDVK-----SAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
K + + L C+F + + ++ D T+ ++ + +++ G ++
Sbjct: 345 KR-SGIPPDRGILGKLLCSFSEESELSRITKVIIGDIDTKSVMLLYKSLLEGFIRNDLVH 403
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E + + + + + G SE+ K + + NK + +D L + +
Sbjct: 404 EAYNFIQNL---------------MGNHESDGMSEIVKLLKD-QNKAILPDSDSL-SIVI 446
Query: 273 DMYAKCGYIEEALRVFKIVLEK----NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
D K + A+ + +++ ++ +N+II G+ G EE++K+ +M+ +G++
Sbjct: 447 DCLVKANKVNMAVTLLHDIVQNGLIPSLMMYNNIIEGMCKEGRSEESLKLLAEMKDAGVE 506
Query: 329 PDDVTLIAVLTA----CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
P TL + C AG ++ K++ R Y EP +KH CLV LC
Sbjct: 507 PSQYTLNCIYGCLAERCDFAGALDLLKKM-----RFYGFEPWIKHTTCLVKKLC 555
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 52/265 (19%)
Query: 176 NFGDVKSAQLLFDQMTE-----KNVVTWTAMINGHVKQKNYREGIDL----FRKMRDSGV 226
N G V+ A +FD++ E N T+ ++ K + ++L ++MRD G
Sbjct: 153 NAGLVEEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNS--SSVELVEARLKEMRDCGF 210
Query: 227 EVNELTLVSVLSACANLGASE--------------------------LGKW--------V 252
++ TL VL N G SE KW +
Sbjct: 211 HFDKFTLTPVLQVYCNNGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFEL 270
Query: 253 HEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF----KIVLEKNVCTWNSIIGGLAI 308
E + + I LN K L + K I++A ++F ++ + ++ ++ +IGGL
Sbjct: 271 IEMLEERHIRLNYKTFCVLIHGFVKESRIDKAFQLFEKMRRMGMNPDIALYDVLIGGLCK 330
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVK 368
H E A+ ++ +++ SGI PD L +L + S + + ++ D + +
Sbjct: 331 HKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITKVIIG---DIDTKSVML 387
Query: 369 HYGCLVDLLCRARLLDEAYEVIRNM 393
Y L++ R L+ EAY I+N+
Sbjct: 388 LYKSLLEGFIRNDLVHEAYNFIQNL 412
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 30/185 (16%)
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIIN-----PSTFAFNTVIRGYAEAGLGHRGIQ 117
+S L I L N+ + A VF+++ P+ + +N ++ +++ ++
Sbjct: 139 MSPGALGFFIRCLGNAGLVEEASSVFDRVREMGLCVPNAYTYNCLLEAISKSN--SSSVE 196
Query: 118 L----YTQMIGNGLDPDSFTY-PILLKACGDLRQVKGVHSLVVKSKDFNSVI-------H 165
L +M G D FT P+L C + + + + FN ++ H
Sbjct: 197 LVEARLKEMRDCGFHFDKFTLTPVLQVYCNNGKSERALSV-------FNEILSRGWLDEH 249
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEK----NVVTWTAMINGHVKQKNYREGIDLFRKM 221
T L+ +C +G V A L + + E+ N T+ +I+G VK+ + LF KM
Sbjct: 250 ISTILVVSFCKWGQVDKAFELIEMLEERHIRLNYKTFCVLIHGFVKESRIDKAFQLFEKM 309
Query: 222 RDSGV 226
R G+
Sbjct: 310 RRMGM 314
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 254/455 (55%), Gaps = 40/455 (8%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDPDSFTYPILLKAC- 141
A +F + + S ++N +I GY + GL + ++L+++M+ + + PD FT +L AC
Sbjct: 249 AESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 308
Query: 142 --GDLRQVKGVHSLVVKSK-DFNSVIH-------------------------------SL 167
G++R K VH+ +++++ +NS + S
Sbjct: 309 NLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISF 368
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
T L+ Y GD++SA+ +F M ++VV WTAMI G+ + E IDLFR M G E
Sbjct: 369 TALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPE 428
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
N TL +VLS CA+L + GK +H ++ + + + A+ MYA+ G A R+
Sbjct: 429 PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRM 488
Query: 288 F-KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
F ++ K TW S+I LA HG GEEAV +F +M +G++PD +T + VL+ACSHAG
Sbjct: 489 FDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 548
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+ +GK + ++ ++++ P + HY C+VDLL RA L EA E IR MP+EP+A+ WGSLL
Sbjct: 549 VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 608
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
+AC N ELAE+A E+L+ ++P N G Y ++N+Y+A +W DA ++ + KE+
Sbjct: 609 SACRVHK---NAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKA 665
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSM 501
+ K G S I +H F D HP + +Y+M
Sbjct: 666 VRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 173/412 (41%), Gaps = 68/412 (16%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
L+ S ++A A VF ++ ++ ++ G AG I+ M +G P
Sbjct: 104 LLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPT 163
Query: 131 SFTYPILLKACGDLRQV---KGVHSLVVK----------------------SKDFNSV-- 163
FT +L +C + + VHS VVK S+ +V
Sbjct: 164 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFE 223
Query: 164 ------IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
+ S +++ + G + A+ LF+ M ++++V+W AMI G+ + + + L
Sbjct: 224 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKL 283
Query: 218 FRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYA 276
F +M +S + +E T+ SVLSACANLG +GK VH ++ + + N ++ AL YA
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 343
Query: 277 KCGYIEEALRV---------------------------------FKIVLEKNVCTWNSII 303
K G +E A R+ F ++ ++V W ++I
Sbjct: 344 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 403
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
G +G +EA+ +F M G +P+ TL AVL+ C+ ++ GK+I R +
Sbjct: 404 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL-L 462
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
E + ++ + R+ A + + + W S++ A A G
Sbjct: 463 EQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 514
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 132/277 (47%), Gaps = 36/277 (12%)
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ + L++ + G + A+ +F +M E++ V+WT M+ G + + E I M
Sbjct: 98 VFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTA 157
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
G + TL +VLS+CA A +G+ VH FV K + + ++ +MY KCG E
Sbjct: 158 DGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSET 217
Query: 284 ALRV-------------------------------FKIVLEKNVCTWNSIIGGLAIHGCG 312
A V F+ + ++++ +WN++I G +G
Sbjct: 218 ATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLD 277
Query: 313 EEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHY 370
+A+K+F +M S + PD+ T+ +VL+AC++ G + GK++ Y +R + V +
Sbjct: 278 AKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN- 336
Query: 371 GCLVDLLCRARLLDEAYEVI-RNMPMEPNAVLWGSLL 406
L+ ++ ++ A ++ ++M + N + + +LL
Sbjct: 337 -ALISTYAKSGSVENARRIMDQSMETDLNVISFTALL 372
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 277/492 (56%), Gaps = 22/492 (4%)
Query: 37 LQKCTHLVQFK---QVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQII 92
L C L+ QVHA + K+ + +D + + LI+ +A A VF+ +I
Sbjct: 154 LSACAGLMDLNMGTQVHALVSKSRYS----TDVYMGSALIDMYSKCGSVACAEEVFSGMI 209
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---G 149
+ +N++I Y + G ++++ +M+ +GL+PD T ++ AC L +K
Sbjct: 210 ERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQ 269
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H+ VVK+ F + L+ Y V A+ +FD+M+ +NVV+ T+M++G+ +
Sbjct: 270 IHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAA 329
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGK-------WVHEFVNKNCII 262
+ + +F KM V + N A L + W + N +
Sbjct: 330 SVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLK 389
Query: 263 LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
+ +G +L DMY KCG IE+ RVF+ + E++ +WN+II G A +G G EA+++F +M
Sbjct: 390 SDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKM 449
Query: 323 QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARL 382
+ G KPD VT+I VL ACSHAGL+E+G+ F++M ++ + P HY C+VDLL RA
Sbjct: 450 LVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGC 508
Query: 383 LDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLM 442
L+EA +I MP+ P+AV+WGSLL AC N+E+ + A E+L++++P+N G YVL+
Sbjct: 509 LNEAKNLIEAMPVNPDAVVWGSLLAACKVH---GNIEMGKHAAEKLLEIDPWNSGPYVLL 565
Query: 443 SNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
SN+YA +W D ++R+LM+++ + K PGCS IE+ VH F+V D HP ++IYS+L
Sbjct: 566 SNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVL 625
Query: 503 EYVAISLREECY 514
+ + ++ Y
Sbjct: 626 KMLTEQMKRVGY 637
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 182/373 (48%), Gaps = 42/373 (11%)
Query: 129 PDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL 185
P+S + LL +C R +G VH+ ++ ++ F+ I RLI Y + A+
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQ-FSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 186 LFDQMTEKNVVTWTA-------------------------------MINGHVKQKNYREG 214
LFD+M ++N TW + M++G + + E
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 215 IDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDM 274
++ F KM +NE + S LSACA L +G VH V+K+ + +G+AL DM
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y+KCG + A VF ++E+N+ TWNS+I +G EA+++F +M SG++PD+VTL
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+V++AC+ +++G +I + + K ++ LVD+ + ++EA V M
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
+ N V S+++ A A A+V+ A ++ + N ++ + Y + ++
Sbjct: 312 IR-NVVSETSMVSGYARA---ASVKAARFMFSKMTQR---NVVSWNALIAGYTQNGENEE 364
Query: 455 AGKMRRLMKERNI 467
A ++ RL+K +I
Sbjct: 365 ALRLFRLLKRESI 377
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/454 (35%), Positives = 253/454 (55%), Gaps = 35/454 (7%)
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKG 149
N A+N +I GY G +++ +M+ +G++ D FTYP +++AC G L+ K
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 150 VHSLVVKSKDF-----NSVIH------------------------SLTRLITFYCNFGDV 180
VH+ V++ +DF NS++ S L++ Y + G +
Sbjct: 308 VHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSAC 240
A+L+F +M EKN+++W MI+G + EG+ LF M+ G E + + +C
Sbjct: 368 GEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC 427
Query: 241 ANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN 300
A LGA G+ H + K + G AL MYAKCG +EEA +VF+ + + +WN
Sbjct: 428 AVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWN 487
Query: 301 SIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRD 360
++I L HG G EAV ++ +M GI+PD +TL+ VLTACSHAGL+++G++ F +M
Sbjct: 488 ALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETV 547
Query: 361 YKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVEL 420
Y++ P HY L+DLLCR+ +A VI ++P +P A +W +LL+ C N+EL
Sbjct: 548 YRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH---GNMEL 604
Query: 421 AEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEIND 480
IA ++L L P +DG Y+L+SN++AA QW++ ++R+LM++R + K CS IE+
Sbjct: 605 GIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMET 664
Query: 481 VVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
VH F+V D HP +E +Y L+ + +R Y
Sbjct: 665 QVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGY 698
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 214/502 (42%), Gaps = 114/502 (22%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LPL + L + VH II F R L +LI+ SS++ YA +F++I
Sbjct: 23 LPLRRTSLQLA--RAVHGNIITFGFQPRA---HILNRLIDVYCKSSELNYARQLFDEISE 77
Query: 94 PSTFAFNTVIRGYAEAGL---------------------------------GHRGIQLYT 120
P A T++ GY +G G+ I L+
Sbjct: 78 PDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFC 137
Query: 121 QMIGNGLDPDSFTYPILLKACG----DLRQVKGVHSLVVKSKDFNSVIHSLTR-LITFYC 175
+M G PD+FT+ +L D +Q H+ +KS I S++ L++ Y
Sbjct: 138 KMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSG--AGYITSVSNALVSVYS 195
Query: 176 NFGD----VKSAQLLFDQMTEKNVVTWT-------------------------------- 199
+ SA+ +FD++ EK+ +WT
Sbjct: 196 KCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYN 255
Query: 200 AMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV--- 256
AMI+G+V + Y+E +++ R+M SG+E++E T SV+ ACA G +LGK VH +V
Sbjct: 256 AMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR 315
Query: 257 -------NKNCIILNDKLGA--------------------ALTDMYAKCGYIEEALRVFK 289
+ + + L K G AL Y G+I EA +FK
Sbjct: 316 EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFK 375
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ EKN+ +W +I GLA +G GEE +K+F M+ G +P D + +C+ G
Sbjct: 376 EMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN 435
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
G++ + + + ++ L+ + + +++EA +V R MP ++V W +L+ A
Sbjct: 436 GQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAAL 493
Query: 410 ASADDGAN-VELAEIAMERLIK 430
GA V++ E +++ I+
Sbjct: 494 GQHGHGAEAVDVYEEMLKKGIR 515
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 135/296 (45%), Gaps = 33/296 (11%)
Query: 47 KQVHAQIIKAS-----FDN---------------RTISDTQLAK-------LIESLVNSS 79
KQVHA +++ FDN R I + AK L+ V+S
Sbjct: 306 KQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSG 365
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLK 139
I A L+F ++ + ++ +I G AE G G G++L++ M G +P + + +K
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 140 ACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVV 196
+C L + H+ ++K F+S + + LIT Y G V+ A+ +F M + V
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSV 484
Query: 197 TWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG-KWVHEF 255
+W A+I + + E +D++ +M G+ + +TL++VL+AC++ G + G K+
Sbjct: 485 SWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSM 544
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGGLAIHG 310
I A L D+ + G +A V + + + W +++ G +HG
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 148/365 (40%), Gaps = 101/365 (27%)
Query: 134 YPILLKACGDLRQV-----KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
Y L+ C LR+ + VH ++ + F H L RLI YC ++ A+ LFD
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNII-TFGFQPRAHILNRLIDVYCKSSELNYARQLFD 73
Query: 189 QMTE---------------------------------KNVVTWTAMINGHVKQKNYREGI 215
+++E ++ V + AMI G + I
Sbjct: 74 EISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAI 133
Query: 216 DLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND---KLGA--- 269
+LF KM+ G + + T SVL+ A + E K C+ + K GA
Sbjct: 134 NLFCKMKHEGFKPDNFTFASVLAGLALVADDE----------KQCVQFHAAALKSGAGYI 183
Query: 270 -----ALTDMYAKCG----YIEEALRVFKIVLEKNVCTW--------------------- 299
AL +Y+KC + A +VF +LEK+ +W
Sbjct: 184 TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLE 243
Query: 300 -----------NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
N++I G G +EA++M +M SGI+ D+ T +V+ AC+ AGL++
Sbjct: 244 GMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQ 303
Query: 349 KGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
GK++ Y +RR+ + + LV L + DEA + MP + + V W +LL+
Sbjct: 304 LGKQVHAYVLRRE---DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLS 359
Query: 408 ACASA 412
S+
Sbjct: 360 GYVSS 364
>gi|218202680|gb|EEC85107.1| hypothetical protein OsI_32492 [Oryza sativa Indica Group]
Length = 1073
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 254/435 (58%), Gaps = 25/435 (5%)
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD-PDSFTYPILLKACGDLRQVKGVH 151
+P+TF++N+ IR A H I LY M+ + P+++TYP LL AC L
Sbjct: 50 HPTTFSYNSAIRALARGPRPHLAISLYRSMLSHSRSHPNNYTYPPLLAACARLADSDSSS 109
Query: 152 -------SLVVKSKDFNSVIHSLTR-----LITFYCNFGDVKSAQLLFD--QMTEKNVVT 197
+ + + F + S R L++ Y GD+ +A+ +FD +++
Sbjct: 110 AAAAAAAGVALHASLFRRGLESPDRFIRASLLSLYAAAGDLTAARQVFDLSPPNHRDLPL 169
Query: 198 WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
W ++++ ++ + +Y + + LFR MR + + +TL+++LSACA+LGA +W H ++
Sbjct: 170 WNSLLHAYLSRAHYVQVLRLFRTMRTA----DHVTLLALLSACAHLGALHTARWAHAYLA 225
Query: 258 KNC-IILNDKLGAALTDMYAKCGYIEEALRVF--KIVLEKNVCTWNSIIGGLAIHGCGEE 314
C + L AL +MY +CG ++ A +F K+V TW +I GLA++G +
Sbjct: 226 TTCSFPITTNLATALLNMYMRCGDVQTACSLFHSTPTRHKDVHTWTVMIAGLALNGFSTD 285
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+ +F M+ I+PD VTL AVL+AC+HAG++++GK I M DY ++P ++HYGC V
Sbjct: 286 ALHLFTHMKDHNIQPDSVTLTAVLSACTHAGMVDEGKRILRRMPLDYHLQPTIEHYGCTV 345
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
DLL RA LL+EA +IR +P + + LWG+LL AC N E+ ++ +++L+P
Sbjct: 346 DLLGRAGLLEEALALIRAVPFKADVALWGALLVACRCH---RNFEMGQMVAMEILRLDPQ 402
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPC 494
+ G +V +SN+YAA +WD ++R MK+ I K PG SV+E++ VV+EF+ GD HP
Sbjct: 403 HAGAWVFLSNVYAAAGKWDLVQEVRSSMKQHRIHKPPGSSVVELDGVVYEFLSGDHSHPQ 462
Query: 495 SEEIYSMLEYVAISL 509
S++IY+ML+ + +L
Sbjct: 463 SDQIYAMLDEIGKTL 477
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 180/502 (35%), Positives = 278/502 (55%), Gaps = 30/502 (5%)
Query: 37 LQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQII 92
++ C+ L KQ+H Q + SD +A LI+ + A +F++I
Sbjct: 93 IKSCSSLYDLCAGKQIHQQAFVFGYG----SDIFVASALIDMYSKCGYLNDARKLFDEIP 148
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQL-----------YTQMIGNGLDPDSFTYPILLKAC 141
+ ++ ++I GY + + L Y +++G G+ DS ++ AC
Sbjct: 149 ERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISAC 208
Query: 142 GDL---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
+ + VH L VK K F + L+ Y G++ ++ +FD M E +V +W
Sbjct: 209 ARVCVKSVTECVHGLAVK-KGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSW 267
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSG-VEVNELTLVSVLSACANLGASELGKWVHEFVN 257
++I + + E LF M G V N +TL +VL ACA+ GA ++GK +H+ V
Sbjct: 268 NSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVV 327
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
K + N +G ++ DMY KCG +E A + F + KNV +W ++ G +HG G+EA+K
Sbjct: 328 KMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMK 387
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLL 377
+F++M GIKP+ +T ++VL ACSHAGL+++G F M+ ++ VEP ++HY C+VDLL
Sbjct: 388 VFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLL 447
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDG 437
RA L EAY +I+ M ++P+ ++WGSLL AC NVEL EI+ +L KL+P N G
Sbjct: 448 GRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHK---NVELGEISARKLFKLDPSNCG 504
Query: 438 NYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEE 497
YVL+SNIYA +WDD +MR LMK ++K PG S++E VH F+VGD HP E+
Sbjct: 505 YYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEK 564
Query: 498 IYSMLEYVAISLREECYAARMP 519
IY L+ + + L+E Y MP
Sbjct: 565 IYEYLDELNVKLQEVGY---MP 583
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 179/368 (48%), Gaps = 53/368 (14%)
Query: 95 STFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVH 151
S +++N++I +A +G + + ++ M L P+ T+P +K+C DL K +H
Sbjct: 50 SVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIH 109
Query: 152 SLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
+ S I + LI Y G + A+ LFD++ E+NVV+WT+MI+G+V+ +
Sbjct: 110 QQAFVF-GYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERA 168
Query: 212 REGIDLFR-----------KMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
RE + LF+ ++ GV V+ + L V+SACA + + + VH K
Sbjct: 169 REAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKG 228
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+G L D YAKCG I + +VF + E +VC+WNS+I A +G EA +F
Sbjct: 229 FEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFS 288
Query: 321 QMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCR 379
M G ++ + VTL AVL AC+H+G ++ GK I ++ ++E N+ +VD+ C+
Sbjct: 289 DMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCI-HDQVVKMELEDNLVVGTSIVDMYCK 347
Query: 380 ARLLDEA-----------------------------------YEVIRNMPMEPNAVLWGS 404
++ A YE+IR ++PN + + S
Sbjct: 348 CGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIR-CGIKPNYITFVS 406
Query: 405 LLTACASA 412
+L AC+ A
Sbjct: 407 VLAACSHA 414
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIE 348
K V + +V +WNSII A G +A+ F M+ + P+ T + +CS +
Sbjct: 44 KYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLC 103
Query: 349 KGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
GK+I + + ++ L+D+ + L++A ++ +P E N V W S+++
Sbjct: 104 AGKQI-HQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIP-ERNVVSWTSMISG 161
>gi|115467246|ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|51535413|dbj|BAD37283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595262|dbj|BAF19136.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|125596589|gb|EAZ36369.1| hypothetical protein OsJ_20697 [Oryza sativa Japonica Group]
Length = 602
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/349 (41%), Positives = 219/349 (62%), Gaps = 3/349 (0%)
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
S T ++ C G V A+ +FD M +N+V+W +MI+G+VK + + +++F +MR G
Sbjct: 166 SWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMRALG 225
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEAL 285
VE N S L AC GA G+ ++ +V ++ I ++ KL A+ DMY KCG ++EA
Sbjct: 226 VEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVVDMYCKCGCVDEAW 285
Query: 286 RVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAG 345
VF + + + TWN +IGG A+HG ++A+++F QM+ +G+ PDDVTL+ VLTAC+HAG
Sbjct: 286 GVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTACAHAG 345
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
+ +G+ ++ + +EP +HYGC+VDL RA LDEA +VI MPM+P+ + G+L
Sbjct: 346 EVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLAVLGAL 405
Query: 406 LTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKER 465
L AC D V+L E R+I L+P N G YVL++N+ A +WD+ GK+RRLM ER
Sbjct: 406 LGACKIHGD---VDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVRRLMDER 462
Query: 466 NIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
N+ K G SVIE++ EF G+ RHP + EIY+M + +R E Y
Sbjct: 463 NVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGY 511
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 129/257 (50%), Gaps = 6/257 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
++ L + A VF+ + + ++N++I GY +A ++++ +M G++ +
Sbjct: 170 MVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMRALGVEGN 229
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
F L AC G L + + ++ V +S T ++ YC G V A +F
Sbjct: 230 GFVATSALVACTGAGALGRGREIYRWVEQSG-IEVDAKLATAVVDMYCKCGCVDEAWGVF 288
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG-AS 246
D + + + TW MI G + ++LF +M +GV +++TL++VL+ACA+ G S
Sbjct: 289 DSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTACAHAGEVS 348
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGG 305
E ++++ V+++ I + + D++ + G ++EA +V ++ ++ ++ +++G
Sbjct: 349 EGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLAVLGALLGA 408
Query: 306 LAIHGCGEEAVKMFWQM 322
IHG + + W++
Sbjct: 409 CKIHGDVDLGEAIGWRV 425
>gi|347954494|gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oleracea]
Length = 485
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/463 (37%), Positives = 255/463 (55%), Gaps = 38/463 (8%)
Query: 85 HLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL 144
H NQ + +T ++ + I + G + +T M G++P+ T LL C D
Sbjct: 18 HQKLNQSTSETTVSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADC 77
Query: 145 ----------------------------------RQVKGVHSLVVKSKDFNSVIHSLTRL 170
R+ + + + +D NSV + +
Sbjct: 78 EPFGDSLHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSV--TWNTM 135
Query: 171 ITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNE 230
I Y G V A +FD+M E+++++WTAMING VK+ + E + FR+M+ SGV+ +
Sbjct: 136 IDGYMRSGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDY 195
Query: 231 LTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI 290
+ +++ L+ACANLGA G WVH FV N ++ +L D+Y +CG +E A +VF
Sbjct: 196 VAVIAALAACANLGALSFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDE 255
Query: 291 VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+ ++ V +WNS+I G A +G E++ F +MQ KPD VT LTACSH GL+E+G
Sbjct: 256 MEKRTVVSWNSVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEG 315
Query: 351 KEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
F M+RDY++ P ++HYGCLVDL RA L+EA +V+ +MPM+PN V+ GSLL AC
Sbjct: 316 VRYFEAMKRDYRISPRIEHYGCLVDLYSRAGRLEEALKVVESMPMKPNEVVIGSLLAACR 375
Query: 411 SADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN 470
+ G + ELAE M+RL +L+ NYV++SN+YAA QW+ A KMRR MK + K
Sbjct: 376 T--HGNDTELAERMMKRLSELKVKGHSNYVILSNMYAADGQWEGASKMRRKMKGLGLKKQ 433
Query: 471 PGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREEC 513
PG S IEI+D H FM GD H + I +LE ++ R +C
Sbjct: 434 PGFSSIEIDDRTHVFMAGDSAHVENGYIREVLELISSDSRLQC 476
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 132/265 (49%), Gaps = 10/265 (3%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I+ + S ++ A VF+++ ++ +I G+ + GL + + +M +G+ PD
Sbjct: 135 MIDGYMRSGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPD 194
Query: 131 SFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
L AC +L + VH VV S+DF + + LI YC G V+ A+ +F
Sbjct: 195 YVAVIAALAACANLGALSFGLWVHRFVV-SQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 253
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
D+M ++ VV+W ++I G + E + FR+M++ + + +T L+AC+++G E
Sbjct: 254 DEMEKRTVVSWNSVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVE 313
Query: 248 LGKWVHEFVNKNCIILND-KLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGG 305
G E + ++ I + L D+Y++ G +EEAL+V + + ++ N S++
Sbjct: 314 EGVRYFEAMKRDYRISPRIEHYGCLVDLYSRAGRLEEALKVVESMPMKPNEVVIGSLLAA 373
Query: 306 LAIHG----CGEEAVKMFWQMQMSG 326
HG E +K ++++ G
Sbjct: 374 CRTHGNDTELAERMMKRLSELKVKG 398
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 267/460 (58%), Gaps = 10/460 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+Q+H+ ++K ++ L++ + A + FN + A+N +I GY
Sbjct: 379 RQLHSSLMKMDMESDLFVSV---GLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 435
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSV 163
++ + L+ +M G+ + T +LK+ L+ V + VH L VKS F+S
Sbjct: 436 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKS-GFHSD 494
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
I+ + LI Y V+ A+ +F++ T ++V++T+MI + + E + LF +M+D
Sbjct: 495 IYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQD 554
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
++ + S+L+ACANL A E GK +H + K +L+ G +L +MYAKCG I++
Sbjct: 555 MELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDD 614
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A R F + E+ + +W+++IGGLA HG G +A+++F QM G+ P+ +TL++VL AC+H
Sbjct: 615 AGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNH 674
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
AGL+ + K F +M + +P +HY C++DLL RA ++EA E++ MP E NA +WG
Sbjct: 675 AGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWG 734
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL A D VEL A E L LEP G +VL++NIYA+ +W++ ++RRLM+
Sbjct: 735 ALLGAARIHKD---VELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMR 791
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
+ + K PG S IE+ D V+ F+VGD H S+EIY+ L+
Sbjct: 792 DSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLD 831
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 209/414 (50%), Gaps = 13/414 (3%)
Query: 2 LKQLVPN-SQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFK---QVHAQIIKAS 57
L Q VP SQ T N N S + LL +C + Q+HA I K+
Sbjct: 27 LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 58 FDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQ 117
+ L L N YA + ++ P +++ +I GYA+ GLG +
Sbjct: 87 LSDDPSIRNHLINLYSKCRN---FGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALM 143
Query: 118 LYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFY 174
+ +M G+ + FT+ +LKAC DLR K VH +VV S F + L+ Y
Sbjct: 144 AFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVS-GFEGDVFVANTLVVMY 202
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
+ ++ LFD++ E+NVV+W A+ + +V+ E + LF +M SG++ NE +L
Sbjct: 203 AKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLS 262
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
S+++AC L S GK +H ++ K + AL DMYAK G + +A+ VF+ + +
Sbjct: 263 SMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQP 322
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
++ +WN++I G +H E+A+++ QM+ SGI P+ TL + L AC+ GL E G+++
Sbjct: 323 DIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLH 382
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
++ + +E ++ LVD+ + LL++A +P E + + W ++++
Sbjct: 383 SSLMK-MDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP-EKDLIAWNAIISG 434
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 219/460 (47%), Gaps = 46/460 (10%)
Query: 47 KQVHAQIIKASFDNRT-ISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
KQVH ++ + F+ +++T L+ + + +F++I + ++N +
Sbjct: 177 KQVHGVVVVSGFEGDVFVANT----LVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSC 232
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR---QVKGVHSLVVK-SKDFN 161
Y + + L+ +M+ +G+ P+ F+ ++ AC LR + K +H ++K D++
Sbjct: 233 YVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWD 292
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
S L+ Y GD+ A +F+++ + ++V+W A+I G V +++ + ++L +M
Sbjct: 293 PF--SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM 350
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
+ SG+ N TL S L ACA +G ELG+ +H + K + + + L DMY+KC +
Sbjct: 351 KRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 410
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
E+A F ++ EK++ WN+II G + + EA+ +F +M GI + TL +L +
Sbjct: 411 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 470
Query: 342 SHAGLIE-----KGKEIFYNMRRD-YKVEPNVKHYG--------------CLV-DLLCRA 380
+ ++ G + D Y V + YG C + DL+
Sbjct: 471 AGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFT 530
Query: 381 RLL---------DEAYEV---IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERL 428
++ +EA ++ +++M ++P+ + SLL ACA+ + + + +
Sbjct: 531 SMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKY 590
Query: 429 IKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIV 468
+ GN ++ N+YA DDAG+ + ER IV
Sbjct: 591 GFVLDIFAGNSLV--NMYAKCGSIDDAGRAFSELTERGIV 628
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/471 (34%), Positives = 270/471 (57%), Gaps = 10/471 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
KQVH ++K + L L+ + Y+ ++F + + ++ +I GY
Sbjct: 233 KQVHCVVVKNGVLEFV---SVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGY 289
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSV 163
++AG H+ ++L+++M G P FT +LKAC D+ + K H ++KS + +
Sbjct: 290 SQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKS-GYETQ 348
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
I++ T L+ Y FG A+ FD + E ++V WT++I G+V+ E + ++ +M+
Sbjct: 349 IYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQM 408
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
+ NELT+ SVL AC+NL A E GK +H K + + +AL+ MYAKCG +EE
Sbjct: 409 RKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEE 468
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
+ +F+ +L++++ +WN++I GL+ +G G EA+++F +M++ G KPD +T + VL+ACSH
Sbjct: 469 GVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSH 528
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
G++++G F M ++ + P V+HY C+VD+L RA L+EA E I + ++ LW
Sbjct: 529 MGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWR 588
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
LL AC + N EL A E+L++L YVL+S+IY A + D ++RR+MK
Sbjct: 589 ILLPAC---RNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMK 645
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
R + K GCS IE+ VH F+VGD HP EEI + + ++++ Y
Sbjct: 646 VRGVRKETGCSWIELKSHVHVFVVGDQIHPQIEEIQGAIWRLRKHMKDDGY 696
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 190/391 (48%), Gaps = 48/391 (12%)
Query: 59 DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEA--------- 109
NR+ + + + + QI +AH++ ++ + N +I+ YA+
Sbjct: 6 QNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLV 65
Query: 110 -----------------GLGHRG-------IQLYTQMIGNGLDPDSFTYPILLKACG--- 142
GL H G ++L+ +MI N + PD+ T+P + A
Sbjct: 66 FENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNL 125
Query: 143 ----DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
D RQ VH L +K+ + V + L+ FYC G V A+ LFD+M E+N+V+W
Sbjct: 126 GCNFDARQ---VHVLGIKTASIDDVFVG-SSLVNFYCKVGCVFEARKLFDRMPERNLVSW 181
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
T MI+G+ ++ +E + +F MR +NE SVLSA + GK VH V K
Sbjct: 182 TTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVK 241
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
N ++ + AL MYAKCG + +L +F++ +KN TW+++I G + G +A+K+
Sbjct: 242 NGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKL 301
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLL 377
F +M +G P + TL+ VL ACS IE+GK+ Y ++ Y E + LVD+
Sbjct: 302 FSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGY--ETQIYTATALVDMY 359
Query: 378 CRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+ +A + + +EP+ VLW S++
Sbjct: 360 AKFGFTGDARKGF-DFLLEPDLVLWTSIIAG 389
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 196/375 (52%), Gaps = 15/375 (4%)
Query: 47 KQVHAQIIK-ASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
+QVH IK AS D+ + + L+ + A +F+++ + ++ T+I G
Sbjct: 132 RQVHVLGIKTASIDDVFVGSS----LVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISG 187
Query: 106 YAEAGLGHRGIQLY--TQMIGNGLDPDSFTYPILLKACGDLRQV-KGVHSLVVKSK--DF 160
YA + + ++ +++ L+ FT + C + K VH +VVK+ +F
Sbjct: 188 YASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEF 247
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
SV+++L +T Y G++ + +LF+ ++KN +TW+A+I G+ + + + + LF K
Sbjct: 248 VSVLNAL---VTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSK 304
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M +G +E TLV VL AC+++ A E GK H ++ K+ AL DMYAK G+
Sbjct: 305 MHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGF 364
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
+A + F +LE ++ W SII G +G EEA+ M+ +MQM I P+++T+ +VL A
Sbjct: 365 TGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKA 424
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
CS+ +E+GK+I + Y + P + L + + L+E + R M ++ + V
Sbjct: 425 CSNLAALEQGKQIHARTIK-YGLGPELSIRSALSTMYAKCGSLEEGVLIFRRM-LQRDIV 482
Query: 401 LWGSLLTACASADDG 415
W ++++ + G
Sbjct: 483 SWNAMISGLSQNGHG 497
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 146/292 (50%), Gaps = 8/292 (2%)
Query: 129 PDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL 185
P + ++ LL D + +K +H+ ++K +S + LI FY G + A+L
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 186 LFDQMTEKNVVTWTAMING--HVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA-N 242
+F+ + KNVV++ +I+G H K ++LFR+M + + + T V +A A N
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALN 124
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
LG + + VH K I + +G++L + Y K G + EA ++F + E+N+ +W ++
Sbjct: 125 LGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTM 184
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
I G A +EA+ +F M++ ++ +VL+A ++ GK++ + ++
Sbjct: 185 ISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGV 244
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
+E V LV + + L+ + ++ M + NA+ W +L+T + A D
Sbjct: 245 LE-FVSVLNALVTMYAKCGNLNYSL-MLFEMCSDKNAITWSALITGYSQAGD 294
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/461 (35%), Positives = 268/461 (58%), Gaps = 34/461 (7%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM-------- 122
+I N+ ++ A +F+++ + ++ ++I+GY +AG L+ +M
Sbjct: 174 MITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASW 233
Query: 123 ---------IGN--------GLDP--DSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSV 163
+GN L P D T+ +++ C ++ + ++ N
Sbjct: 234 KVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERN-- 291
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ S +I Y GDV +A+ +FDQM EKN+V W+ MI G+ K + + L++ ++
Sbjct: 292 VASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKE 351
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVH-EFVNKNCIILNDKLGAALTDMYAKCGYIE 282
G++ +E + ++SAC+ LG + + V +FV + + N ++ +L DMYAKCG IE
Sbjct: 352 QGIKPDETFALGIISACSQLGVPDTAESVICDFVGPS-LFPNLQVVTSLIDMYAKCGNIE 410
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A++VF++V +K++ ++++I A HG E+A+ +F +MQ + IKPD V + VLTAC+
Sbjct: 411 RAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACN 470
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
H GL+ +G+ +F M +Y ++P+ KHY C+VD+L RA L+EA+ +I +MP+ PNA +W
Sbjct: 471 HGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATVW 530
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL+AC NV+LAE A L ++EP N GNYVL+ NIYA QWDD K+R ++
Sbjct: 531 GALLSACRVH---LNVQLAEAAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMI 587
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
+E + KN G S IE+ V+HEF++GD H SE I+ MLE
Sbjct: 588 RENRVRKNRGSSWIELGSVIHEFVMGDKSHFDSERIFFMLE 628
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 239/532 (44%), Gaps = 87/532 (16%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LL++C L +HA ++ + + SD L KL+ ++YAH +F++ P+
Sbjct: 9 LLKQCRSLKTLTTIHAHLLISG--SIASSDLTLNKLLRLYSKFGAVSYAHKLFDETPEPN 66
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHS 152
+F + +I G+ E + +M + P +FT +LKA L ++K V+
Sbjct: 67 SFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKDGDLVYG 126
Query: 153 LVVK-SKDFNSVIH-----------------------------SLTRLITFYCNFGDVKS 182
L V+ +F+ V+ S +IT Y N G V
Sbjct: 127 LAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDI 186
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A+ LFD+M E+NV++WT+MI G+VK + E LF +M + + ++ +VS + N
Sbjct: 187 ARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKV-MVSAYMSVGN 245
Query: 243 LGAS----------ELGKW---------------VHEFVNKNCIILNDKLGAA---LTDM 274
L A+ ++G W EF ++ + ++ A+ + D
Sbjct: 246 LVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDR----MQERNVASWVMIIDG 301
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
Y K G ++ A VF + EKN+ W+++IGG A G ++K++ + GIKPD+
Sbjct: 302 YIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFA 361
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
+ +++ACS G+ + + + + + PN++ L+D+ + ++ A +V M
Sbjct: 362 LGIISACSQLGVPDTAESVICDFVGP-SLFPNLQVVTSLIDMYAKCGNIERAVQVFE-MV 419
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN---DGNYVLMSNIYAAKAQ 451
+ + + +++TA AN L+E A+ +++ N DG V + A
Sbjct: 420 DQKDLHCYSTVITAF------ANHGLSEDAISLFSEMQKANIKPDG--VAFLGVLTACNH 471
Query: 452 WDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGD-GRHPCSEEIYSML 502
G+ RRL R ++ G I+ ++ + MV GR C EE +S++
Sbjct: 472 GGLVGEGRRLF--RQMIDEYG---IQPSEKHYACMVDILGRAGCLEEAHSLI 518
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/448 (36%), Positives = 266/448 (59%), Gaps = 16/448 (3%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I ++ A ++F+++ + ++ T+I GY + ++ + + ++ + +
Sbjct: 259 MIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQ----NQQVDIARKLFEVMPEKN 314
Query: 131 SFTYPILLKA---CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
++ +LK CG L + S + + SV+ ++ F N G+V A+ +F
Sbjct: 315 EVSWTAMLKGYTNCGRLDEA----SELFNAMPIKSVVACNAMILCFGQN-GEVPKARQVF 369
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
DQM EK+ TW+AMI + ++ + ++LFR M+ G+ N +L+SVLS CA L +
Sbjct: 370 DQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLD 429
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
G+ +H + ++ L+ + + L MY KCG + +A +VF K+V WNSII G A
Sbjct: 430 HGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYA 489
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
HG G EA+++F M SGI PDDVT + VL+ACS+ G ++KG EIF +M Y+VE +
Sbjct: 490 QHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKI 549
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+HY C+VDLL RA L+EA ++I MPME +A++WG+LL AC + ++LAE+A ++
Sbjct: 550 EHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH---MKLDLAEVAAKK 606
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L+ LEP N G ++L+SNIYA++ +WDD ++RR M++R + K PGCS I + VH+F
Sbjct: 607 LLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTG 666
Query: 488 GDGR-HPCSEEIYSMLEYVAISLREECY 514
GD HP EI +LE+++ LRE Y
Sbjct: 667 GDSSGHPEHSEINRILEWLSGLLREAGY 694
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 183/372 (49%), Gaps = 29/372 (7%)
Query: 46 FKQVHAQIIKASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
F+ Q + FD + +T L+ +N+ I A VF+++ + ++ ++R
Sbjct: 140 FQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVR 199
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSL--VVKSKDFNS 162
GY + G+ L+ QM + + ++ ++L ++ L ++ KD
Sbjct: 200 GYVKEGMISEAETLFWQMP----EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKD--- 252
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ + T +I YC G + A++LFD+M +NVV+WT MI G+V+ + +D+ RK+
Sbjct: 253 -VVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQ----VDIARKLF 307
Query: 223 DSGVEVNELTLVSVLSACANLG----ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
+ E NE++ ++L N G ASEL + K+ + N A+ + +
Sbjct: 308 EVMPEKNEVSWTAMLKGYTNCGRLDEASEL---FNAMPIKSVVACN-----AMILCFGQN 359
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G + +A +VF + EK+ TW+++I G +A+++F MQ GI+P+ +LI+VL
Sbjct: 360 GEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVL 419
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
+ C+ ++ G+EI + R + + +V L+ + + L +A +V ++ +
Sbjct: 420 SVCAGLANLDHGREIHAQLVRS-QFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVK-D 477
Query: 399 AVLWGSLLTACA 410
V+W S++T A
Sbjct: 478 VVMWNSIITGYA 489
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 152/336 (45%), Gaps = 45/336 (13%)
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
++ I S LIT Y G ++ A+++FD+M +KN+++W +++ G+ + K +E ++F K
Sbjct: 95 SNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDK 154
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M E N ++ ++S N G + V + + + ++ A+ Y K G
Sbjct: 155 MS----ERNTISWNGLVSGYINNGMINEAREVFDRMPERNVV----SWTAMVRGYVKEGM 206
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
I EA +F + EKNV +W ++GGL G +EA ++F M + D VT ++
Sbjct: 207 ISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMP----EKDVVTRTNMIGG 262
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
G + + + +F M R NV + ++ + + +D A ++ MP E N V
Sbjct: 263 YCQVGRLVEARMLFDEMPRR-----NVVSWTTMITGYVQNQQVDIARKLFEVMP-EKNEV 316
Query: 401 LWGSLL---TACASADD-----------------------GANVELAEIAMERLIKLEPF 434
W ++L T C D+ G N E+ + A + ++
Sbjct: 317 SWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPK-ARQVFDQMREK 375
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN 470
++G + M +Y K DA ++ R+M+ I N
Sbjct: 376 DEGTWSAMIKVYERKGLELDALELFRMMQREGIRPN 411
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 34 LPLLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESL-VNSSQIAYAHLVFN 89
+ +L C L +++HAQ++++ FD D +A ++ S+ + +A A VF+
Sbjct: 416 ISVLSVCAGLANLDHGREIHAQLVRSQFD----LDVYVASVLLSMYIKCGNLAKAKQVFD 471
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQ 146
+ +N++I GYA+ GLG ++++ M +G+ PD T+ +L AC G++++
Sbjct: 472 RFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKK 531
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMI 202
+ + + I ++ G + A L ++M E + + W A++
Sbjct: 532 GLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588
>gi|357143748|ref|XP_003573036.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Brachypodium distachyon]
Length = 484
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 211/333 (63%), Gaps = 3/333 (0%)
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVN 229
+IT G V +A+ +FD+M + V+WTA+I+G VK + E ID F M GVE +
Sbjct: 143 MITGLMRNGLVAAAREVFDEMPAPDKVSWTALIDGCVKNGRHDEAIDCFHSMLRDGVEPD 202
Query: 230 ELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK 289
+TLV+ +SACA +GA LG WVH FV + N ++ +L DMYA+CG ++ A +VF
Sbjct: 203 YVTLVAAISACAEVGALGLGMWVHRFVVDKRLEHNVRVANSLIDMYARCGQVDFARQVFG 262
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEK 349
+ ++ V +WNS+I G A +G +AV+ F M+ G KPD VT VLTACSHAGL ++
Sbjct: 263 RIRKRTVVSWNSMIVGFAANGQYADAVEHFEAMRREGFKPDTVTFTGVLTACSHAGLTDE 322
Query: 350 GKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
G + MR ++ + ++HYGC+VDLL RA L EA V+ +MPM PN V+ G+LL C
Sbjct: 323 GLRYYDAMRTEHGIAARMEHYGCVVDLLGRAGRLGEAMRVVESMPMRPNEVVLGALLAGC 382
Query: 410 ASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVK 469
D V+LAE M+ L++ +P D NYVL+SNIYAA +W AGK+R LMK R + K
Sbjct: 383 RMHGD---VDLAEQLMQHLLEQDPGGDSNYVLLSNIYAAVGKWGGAGKVRSLMKSRGVKK 439
Query: 470 NPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
PG S +EI+ VHEF+ GD HP + E++ +L
Sbjct: 440 RPGQSTVEIDGEVHEFVCGDRSHPQAREVFEVL 472
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 115/245 (46%), Gaps = 6/245 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I L+ + +A A VF+++ P ++ +I G + G I + M+ +G++PD
Sbjct: 143 MITGLMRNGLVAAAREVFDEMPAPDKVSWTALIDGCVKNGRHDEAIDCFHSMLRDGVEPD 202
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
T + AC G L VH VV K + LI Y G V A+ +F
Sbjct: 203 YVTLVAAISACAEVGALGLGMWVHRFVV-DKRLEHNVRVANSLIDMYARCGQVDFARQVF 261
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
++ ++ VV+W +MI G Y + ++ F MR G + + +T VL+AC++ G ++
Sbjct: 262 GRIRKRTVVSWNSMIVGFAANGQYADAVEHFEAMRREGFKPDTVTFTGVLTACSHAGLTD 321
Query: 248 LG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGG 305
G ++ ++ I + + D+ + G + EA+RV + + + N +++ G
Sbjct: 322 EGLRYYDAMRTEHGIAARMEHYGCVVDLLGRAGRLGEAMRVVESMPMRPNEVVLGALLAG 381
Query: 306 LAIHG 310
+HG
Sbjct: 382 CRMHG 386
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 118/267 (44%), Gaps = 38/267 (14%)
Query: 181 KSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR--EGIDLFRKMRDSGVEVNELTLVSVLS 238
+SA ++ ++VV+WT+ I ++ + + + N++TL++VLS
Sbjct: 17 RSATSKPRRLPPRDVVSWTSAIARPAREGDLQGAAAALSAMLSSPAAPPPNDVTLLTVLS 76
Query: 239 ACANLGASELGKWVHEFVNKNCIIL---NDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
ACA +S L + + ++ + L N L L Y A+++F + +++
Sbjct: 77 ACAGDSSSALARPLALSLHALAVKLFPCNLLLCTCLARFYLASRLPHLAIKLFDSMPDRS 136
Query: 296 VCTWNSIIGGLA--------------------------IHGC-----GEEAVKMFWQMQM 324
V T+N++I GL I GC +EA+ F M
Sbjct: 137 VVTYNTMITGLMRNGLVAAAREVFDEMPAPDKVSWTALIDGCVKNGRHDEAIDCFHSMLR 196
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLD 384
G++PD VTL+A ++AC+ G + G + + D ++E NV+ L+D+ R +D
Sbjct: 197 DGVEPDYVTLVAAISACAEVGALGLGMWV-HRFVVDKRLEHNVRVANSLIDMYARCGQVD 255
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTACAS 411
A +V + + V W S++ A+
Sbjct: 256 FARQVFGRI-RKRTVVSWNSMIVGFAA 281
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 59 DNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQ 117
D R + ++A LI+ Q+ +A VF +I + ++N++I G+A G ++
Sbjct: 231 DKRLEHNVRVANSLIDMYARCGQVDFARQVFGRIRKRTVVSWNSMIVGFAANGQYADAVE 290
Query: 118 LYTQMIGNGLDPDSFTYPILLKAC 141
+ M G PD+ T+ +L AC
Sbjct: 291 HFEAMRREGFKPDTVTFTGVLTAC 314
>gi|347954508|gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/434 (37%), Positives = 242/434 (55%), Gaps = 42/434 (9%)
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ-----------------------VKGVH 151
G Q ++ M G++P+ T+ LL CGD + G
Sbjct: 2 GAQGFSDMRFAGVEPNHITFIALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTA 61
Query: 152 SLVVKSK---------------DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVV 196
L + SK D NSV + +I Y G V +A LFD+M ++++
Sbjct: 62 ILGMYSKRGRFRKARLIFDYMEDKNSV--TWNTMIDGYMRSGQVNTAVKLFDEMLNRDLI 119
Query: 197 TWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV 256
+WTAM+NG VK+ + E + FR+M+ SGV+ + + +++ L+AC NLGA G W+H +V
Sbjct: 120 SWTAMVNGFVKKGFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYV 179
Query: 257 NKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAV 316
N ++ +L D+Y +CG +E A +VF + ++ V +WNS+I G A +G E++
Sbjct: 180 MSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESL 239
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDL 376
F +MQ G KPD VT LTACSH GL+E+G F M+RDY++ P ++HYGC+VDL
Sbjct: 240 FYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVDL 299
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFND 436
RA L++A +V+++MPM+PN V+ GSLL AC + G N LAE M+ L L +
Sbjct: 300 YSRAGRLEDALKVVQSMPMKPNEVVIGSLLAAC--KNHGNNTLLAERLMKHLSDLNVKSH 357
Query: 437 GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSE 496
NYV++SN+YAA +W+ A KMRR MK + K PG S IEI++ H FM GD H +
Sbjct: 358 SNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDECTHVFMAGDSAHVETA 417
Query: 497 EIYSMLEYVAISLR 510
I +L ++ LR
Sbjct: 418 NIREILGLMSSDLR 431
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 124/245 (50%), Gaps = 6/245 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I+ + S Q+ A +F++++N ++ ++ G+ + G + + +M +G+ PD
Sbjct: 93 MIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMVNGFVKKGFHEEALSWFREMQISGVKPD 152
Query: 131 SFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
L AC +L + +H V+ S+DF + + LI YC G V+ A+ +F
Sbjct: 153 YVAIIAALAACTNLGALSFGLWIHRYVM-SQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 211
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
D+M ++ VV+W ++I G N E + FRKM++ G + + +T L+AC+++G E
Sbjct: 212 DKMEKRTVVSWNSVIVGFAANGNAHESLFYFRKMQEEGFKPDAVTFTGALTACSHVGLVE 271
Query: 248 LG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGG 305
G ++ I + + D+Y++ G +E+AL+V + + ++ N S++
Sbjct: 272 EGLRYFQTMKRDYRISPRIEHYGCIVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAA 331
Query: 306 LAIHG 310
HG
Sbjct: 332 CKNHG 336
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 106/264 (40%), Gaps = 51/264 (19%)
Query: 34 LPLLQKCTHLVQFK---QVHAQIIKASFDNRT-ISDTQLAKLIESLVNSSQIAYAHLVFN 89
+ L CT+L +H ++ F N +S++ LI+ + +A VF+
Sbjct: 157 IAALAACTNLGALSFGLWIHRYVMSQDFKNNVRVSNS----LIDLYCRCGCVEFARQVFD 212
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-K 148
++ + ++N+VI G+A G H + + +M G PD+ T+ L AC + V +
Sbjct: 213 KMEKRTVVSWNSVIVGFAANGNAHESLFYFRKMQEEGFKPDAVTFTGALTACSHVGLVEE 272
Query: 149 GVHSLVVKSKDF--NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
G+ +D+ + I ++ Y G ++ A + M K
Sbjct: 273 GLRYFQTMKRDYRISPRIEHYGCIVDLYSRAGRLEDALKVVQSMPMKP------------ 320
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
NE+ + S+L+AC N G + L + E + K+ LN K
Sbjct: 321 ----------------------NEVVIGSLLAACKNHGNNTL---LAERLMKHLSDLNVK 355
Query: 267 LGA---ALTDMYAKCGYIEEALRV 287
+ L++MYA G E A ++
Sbjct: 356 SHSNYVILSNMYAADGKWEGASKM 379
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 267/460 (58%), Gaps = 10/460 (2%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+Q+H+ ++K ++ L++ + A + FN + A+N +I GY
Sbjct: 352 RQLHSSLMKMDMESDLFVSV---GLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 408
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSV 163
++ + L+ +M G+ + T +LK+ L+ V + VH L VKS F+S
Sbjct: 409 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKS-GFHSD 467
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
I+ + LI Y V+ A+ +F++ T ++V++T+MI + + E + LF +M+D
Sbjct: 468 IYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQD 527
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
++ + S+L+ACANL A E GK +H + K +L+ G +L +MYAKCG I++
Sbjct: 528 MELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDD 587
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A R F + E+ + +W+++IGGLA HG G +A+++F QM G+ P+ +TL++VL AC+H
Sbjct: 588 AGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNH 647
Query: 344 AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWG 403
AGL+ + K F +M + +P +HY C++DLL RA ++EA E++ MP E NA +WG
Sbjct: 648 AGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWG 707
Query: 404 SLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463
+LL A D VEL A E L LEP G +VL++NIYA+ +W++ ++RRLM+
Sbjct: 708 ALLGAARIHKD---VELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMR 764
Query: 464 ERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
+ + K PG S IE+ D V+ F+VGD H S+EIY+ L+
Sbjct: 765 DSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLD 804
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 195/415 (46%), Gaps = 42/415 (10%)
Query: 2 LKQLVPN-SQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFK---QVHAQIIKAS 57
L Q VP S+ T N N S + LL +C + Q+HA I K+
Sbjct: 27 LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 58 F-DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
D+ +I + LI YA + ++ P +++ +I GYA+ GLG +
Sbjct: 87 LSDDPSIRN----HLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGAL 142
Query: 117 QLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITF 173
+ +M G+ + FT+ +LKAC DLR K VH +VV S F + L+
Sbjct: 143 MAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVS-GFEGDVFVANTLVVM 201
Query: 174 YCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTL 233
Y + ++ LFD++ E+NVV+W A+ + +V+ E + LF +M SG++ NE +L
Sbjct: 202 YAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSL 261
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
S+++AC L S GK +H ++ K + AL DMYAK G + +A+ VF+ + +
Sbjct: 262 SSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ 321
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
++ +WN++I G +H E+A+++ QM+ H+ L++
Sbjct: 322 PDIVSWNAVIAGCVLHEHHEQALELLGQMKRQ----------------LHSSLMK----- 360
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+M D V LVD+ + LL++A +P E + + W ++++
Sbjct: 361 -MDMESDLFVSVG------LVDMYSKCDLLEDARMAFNLLP-EKDLIAWNAIISG 407
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 145/287 (50%), Gaps = 12/287 (4%)
Query: 129 PDSFTYPILLKAC---GDLRQVKGVHSLVVKS--KDFNSVIHSLTRLITFYCNFGDVKSA 183
P S +Y LL C LR +H+ + KS D S+ + L L + FG A
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFG---YA 110
Query: 184 QLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL 243
+ L D+ +E ++V+W+A+I+G+ + + F +M GV+ NE T SVL AC+ +
Sbjct: 111 RKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIV 170
Query: 244 GASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSII 303
+GK VH V + + + L MYAKC ++ R+F + E+NV +WN++
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALF 230
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYK 362
EAV +F++M +SGIKP++ +L +++ AC+ +GK I Y ++ Y
Sbjct: 231 SCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYD 290
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
+P + LVD+ + L +A V + +P+ V W +++ C
Sbjct: 291 WDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGC 334
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 111/270 (41%), Gaps = 43/270 (15%)
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
+LS C + G +H + K+ + + + L ++Y+KC A ++ E +
Sbjct: 62 LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPD 121
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI-- 353
+ +W+++I G A +G G A+ F +M + G+K ++ T +VL ACS + GK++
Sbjct: 122 LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHG 181
Query: 354 --------------------------FYNMRR--DYKVEPNVKHYGCLVDLLCRARLLDE 385
F + +R D E NV + L + E
Sbjct: 182 VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGE 241
Query: 386 AYEVIRNMPM---EPNAVLWGSLLTACASADDGANVELAEIAMERLIKL----EPFNDGN 438
A + M + +PN S++ AC D + +I LIKL +PF+
Sbjct: 242 AVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR---GKIIHGYLIKLGYDWDPFSANA 298
Query: 439 YVLMSNIYAAKAQWDDAGKMRRLMKERNIV 468
V ++YA DA + +K+ +IV
Sbjct: 299 LV---DMYAKVGDLADAISVFEKIKQPDIV 325
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 253/455 (55%), Gaps = 40/455 (8%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDPDSFTYPILLKAC- 141
A +F + S ++N +I GY + GL + ++L+++M+ + + PD FT +L AC
Sbjct: 249 AESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 308
Query: 142 --GDLRQVKGVHSLVVKSK-DFNSVIH-------------------------------SL 167
G++R K VH+ +++++ +NS + S
Sbjct: 309 NLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISF 368
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
T L+ Y GD++SA+ +F M ++VV WTAMI G+ + E IDLFR M G E
Sbjct: 369 TALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPE 428
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
N TL +VLS CA+L + GK +H ++ + + + A+ MYA+ G A R+
Sbjct: 429 PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRM 488
Query: 288 F-KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
F ++ K TW S+I LA HG GEEAV +F +M +G++PD +T + VL+ACSHAG
Sbjct: 489 FDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 548
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+ +GK + ++ ++++ P + HY C+VDLL RA L EA E IR MP+EP+A+ WGSLL
Sbjct: 549 VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 608
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
+AC N ELAE+A E+L+ ++P N G Y ++N+Y+A +W DA ++ + KE+
Sbjct: 609 SACRVHK---NAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKA 665
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSM 501
+ K G S I +H F D HP + +Y+M
Sbjct: 666 VRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 171/412 (41%), Gaps = 68/412 (16%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
L+ S ++A A VF ++ ++ ++ G AG I+ M +G P
Sbjct: 104 LLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPT 163
Query: 131 SFTYPILLKACGDLRQV---KGVHSLVVK--------------------------SKDFN 161
FT +L +C + + VHS VVK S F
Sbjct: 164 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFE 223
Query: 162 SV----IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
+ + S +++ + G + A+ LF+ M +++V+W AMI G+ + + + L
Sbjct: 224 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKL 283
Query: 218 FRKM-RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYA 276
F +M +S + +E T+ SVLSACANLG +GK VH ++ + + N ++ AL YA
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 343
Query: 277 KCGYIEEALRV---------------------------------FKIVLEKNVCTWNSII 303
K G +E A R+ F ++ ++V W ++I
Sbjct: 344 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 403
Query: 304 GGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKV 363
G +G +EA+ +F M G +P+ TL AVL+ C+ ++ GK+I R +
Sbjct: 404 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL-L 462
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
E + ++ + R+ A + + + W S++ A A G
Sbjct: 463 ERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 514
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 131/277 (47%), Gaps = 36/277 (12%)
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ + L++ + G + A+ +F +M E++ V+WT M+ G + + E I M
Sbjct: 98 VFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTA 157
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
G + TL +VLS+CA A +G+ VH FV K + + ++ +MY KCG E
Sbjct: 158 DGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAET 217
Query: 284 ALRVFKIVLEKNVC-------------------------------TWNSIIGGLAIHGCG 312
A VF+ + ++V +WN++I G +G
Sbjct: 218 ASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLD 277
Query: 313 EEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHY 370
+A+K+F +M S + PD+ T+ +VL+AC++ G + GK++ Y +R + V +
Sbjct: 278 AKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN- 336
Query: 371 GCLVDLLCRARLLDEAYEVI-RNMPMEPNAVLWGSLL 406
L+ ++ ++ A ++ ++M + N + + +LL
Sbjct: 337 -ALISTYAKSGSVENARRIMDQSMETDLNVISFTALL 372
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/448 (36%), Positives = 266/448 (59%), Gaps = 16/448 (3%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I ++ A ++F+++ + ++ T+I GY + ++ + + ++ + +
Sbjct: 259 MIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQ----NQQVDIARKLFEVMPEKN 314
Query: 131 SFTYPILLKA---CGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
++ +LK CG L + S + + SV+ ++ F N G+V A+ +F
Sbjct: 315 EVSWTAMLKGYTNCGRLDEA----SELFNAMPIKSVVACNAMILCFGQN-GEVPKARQVF 369
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
DQM EK+ TW+AMI + ++ + ++LFR M+ G+ N +L+SVLS CA L +
Sbjct: 370 DQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLD 429
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
G+ +H + ++ L+ + + L MY KCG + +A +VF K+V WNSII G A
Sbjct: 430 HGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYA 489
Query: 308 IHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
HG G EA+++F M SGI PDDVT + VL+ACS+ G ++KG EIF +M Y+VE +
Sbjct: 490 QHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKI 549
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+HY C+VDLL RA L+EA ++I MPME +A++WG+LL AC + ++LAE+A ++
Sbjct: 550 EHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH---MKLDLAEVAAKK 606
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
L+ LEP N G ++L+SNIYA++ +WDD ++RR M++R + K PGCS I + VH+F
Sbjct: 607 LLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTG 666
Query: 488 GDGR-HPCSEEIYSMLEYVAISLREECY 514
GD HP EI +LE+++ LRE Y
Sbjct: 667 GDSSGHPEHSEINRILEWLSGLLREAGY 694
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 183/372 (49%), Gaps = 29/372 (7%)
Query: 46 FKQVHAQIIKASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIR 104
F+ Q + FD + +T L+ +N+ I A VF+++ + ++ ++R
Sbjct: 140 FQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVR 199
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSL--VVKSKDFNS 162
GY + G+ L+ QM + + ++ ++L ++ L ++ KD
Sbjct: 200 GYVKEGMISEAETLFWQMP----EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKD--- 252
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
+ + T +I YC G + A++LFD+M +NVV+WT MI G+V+ + +D+ RK+
Sbjct: 253 -VVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQ----VDIARKLF 307
Query: 223 DSGVEVNELTLVSVLSACANLG----ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
+ E NE++ ++L N G ASEL + K+ + N A+ + +
Sbjct: 308 EVMPEKNEVSWTAMLKGYTNCGRLDEASEL---FNAMPIKSVVACN-----AMILCFGQN 359
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G + +A +VF + EK+ TW+++I G +A+++F MQ GI+P+ +LI+VL
Sbjct: 360 GEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVL 419
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
+ C+ ++ G+EI + R + + +V L+ + + L +A +V ++ +
Sbjct: 420 SVCAGLANLDHGREIHAQLVRS-QFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVK-D 477
Query: 399 AVLWGSLLTACA 410
V+W S++T A
Sbjct: 478 VVMWNSIITGYA 489
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 152/336 (45%), Gaps = 45/336 (13%)
Query: 161 NSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRK 220
++ I S LIT Y G ++ A+++FD+M +KN+++W +++ G+ + K +E ++F K
Sbjct: 95 SNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDK 154
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M E N ++ ++S N G + V + + + ++ A+ Y K G
Sbjct: 155 MS----ERNTISWNGLVSGYINNGMINEAREVFDRMPERNVV----SWTAMVRGYVKEGM 206
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
I EA +F + EKNV +W ++GGL G +EA ++F M + D VT ++
Sbjct: 207 ISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMP----EKDVVTRTNMIGG 262
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
G + + + +F M R NV + ++ + + +D A ++ MP E N V
Sbjct: 263 YCQVGRLVEARMLFDEMPRR-----NVVSWTTMITGYVQNQQVDIARKLFEVMP-EKNEV 316
Query: 401 LWGSLL---TACASADD-----------------------GANVELAEIAMERLIKLEPF 434
W ++L T C D+ G N E+ + A + ++
Sbjct: 317 SWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPK-ARQVFDQMREK 375
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKN 470
++G + M +Y K DA ++ R+M+ I N
Sbjct: 376 DEGTWSAMIKVYERKGLELDALELFRMMQREGIRPN 411
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 34 LPLLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESL-VNSSQIAYAHLVFN 89
+ +L C L +++HAQ++++ FD D +A ++ S+ + +A A VF+
Sbjct: 416 ISVLSVCAGLANLDHGREIHAQLVRSQFD----LDVYVASVLLSMYIKCGNLAKAKQVFD 471
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQ 146
+ +N++I GYA+ GLG ++++ M +G+ PD T+ +L AC G++++
Sbjct: 472 RFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKK 531
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMI 202
+ + + I ++ G + A L ++M E + + W A++
Sbjct: 532 GLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 267/461 (57%), Gaps = 13/461 (2%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL-VFNQIINPSTFAFNT 101
L Q Q+HA I+K F +TI ++ + +L + +Q+ L VF++ S+ +++
Sbjct: 41 LRQGLQLHAHILK--FGLQTIP--LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSS 96
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK 158
VI +A+ +Q + +M+ +G+ PD YP KACG LR+ K VH L VK+
Sbjct: 97 VISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTG 156
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
+ V + L+ Y G++ A+ LFD+M E+NVV+W+ MI G+ + + E + LF
Sbjct: 157 YYCDVFVG-SSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLF 215
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
++ V+VN+ T SV+ C++ ELGK +H K + +G+AL +Y+KC
Sbjct: 216 KQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKC 275
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G IE A +VF + +N+ WNS++ A H + +F +M G+KP+ ++ ++VL
Sbjct: 276 GVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVL 335
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
ACSHAGL+EKG+E ++++ RDY +EP +HY LVDLL RA L EA VI+ MPM P
Sbjct: 336 YACSHAGLVEKGRE-YFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPT 394
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
+WG+LLT C D E+A +R+++++ + G +VL+SN YAA ++++A +M
Sbjct: 395 ESVWGALLTGCRIHKD---TEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARM 451
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
R+++++R + K G S +E + VH F GD H EIY
Sbjct: 452 RKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIY 492
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/487 (33%), Positives = 272/487 (55%), Gaps = 8/487 (1%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LPLL + L Q VHA ++A D L++ + YA VF+ +
Sbjct: 208 LPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTV 267
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFT-YPILLKACG---DLRQVKG 149
+ ++ +I G+ L+ M+ G+ S T L+ C DLR
Sbjct: 268 RNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQ 327
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H+L+ KS ++ + + L++ Y G + A +LFD++ K+ +++ A+++G+V+
Sbjct: 328 LHALLAKS-GIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNG 386
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E +F+KM+ V+ + T+VS++ AC++L A + G+ H V + L +
Sbjct: 387 KAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICN 446
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
+L DMYAKCG I+ + +VF + +++ +WN++I G IHG G+EA +F M+ G +P
Sbjct: 447 SLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEP 506
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
DDVT I ++ ACSH+GL+ +GK F M Y + P ++HY C+VDLL R LDEAY+
Sbjct: 507 DDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQF 566
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I++MP++ + +WG+LL AC N++L + + KL P GN+VL+SNI++A
Sbjct: 567 IQSMPLKADVRVWGALLGACRIHK---NIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAA 623
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
++D+A ++R + K + K+PGCS IEIN +H F+ GD HPCS +IY L+ + I +
Sbjct: 624 GRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDI 683
Query: 510 REECYAA 516
++ Y A
Sbjct: 684 KKLGYQA 690
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 168/345 (48%), Gaps = 11/345 (3%)
Query: 72 IESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDS 131
+E + Q+A A VF++I P A+N +IR Y+ G H I LY M+ + P+
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 132 FTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
+T+P +LKAC DL + +H+ + ++ + T LI Y A +F
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAA-AVGLHTDLFVSTALIDLYIRCARFGPAANVFA 158
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD-SGVEVNELTLVSVLSACANLGASE 247
+M ++VV W AM+ G+ Y I M+D G+ N TLVS+L A GA
Sbjct: 159 KMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALF 218
Query: 248 LGKWVHEFVNKNCIILNDK---LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
G VH + + + N++ +G AL DMYAKC ++ A RVF + +N TW+++IG
Sbjct: 219 QGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIG 278
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIA-VLTACSHAGLIEKGKEIFYNMRRDYKV 363
G + EA +F M + G+ T +A L C+ + G ++ + + +
Sbjct: 279 GFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQL-HALLAKSGI 337
Query: 364 EPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
++ L+ + +A L++EA + + ++ + + +G+LL+
Sbjct: 338 HADLTAGNSLLSMYAKAGLINEATMLFDEIAIK-DTISYGALLSG 381
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 180/385 (46%), Gaps = 19/385 (4%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L+ C+ L + +HA T LI+ + ++ A VF ++
Sbjct: 105 VLKACSALADLCAGRTIHAHAAAVGLHTDLFVST---ALIDLYIRCARFGPAANVFAKMP 161
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGI-QLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVK 148
A+N ++ GYA G+ H I L GL P++ T LL G L Q
Sbjct: 162 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGT 221
Query: 149 GVHSLVVKS---KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH 205
VH+ +++ ++ V+ T L+ Y + A +F MT +N VTW+A+I G
Sbjct: 222 SVHAYCLRAYLDQNEEQVLIG-TALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGF 280
Query: 206 VKQKNYREGIDLFRKMRDSGV-EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILN 264
V E +LF+ M G+ ++ ++ S L CA+L +G +H + K+ I +
Sbjct: 281 VLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHAD 340
Query: 265 DKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM 324
G +L MYAK G I EA +F + K+ ++ +++ G +G EEA +F +MQ
Sbjct: 341 LTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQA 400
Query: 325 SGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCLVDLLCRARLL 383
++PD T+++++ ACSH ++ G+ + + R +E ++ + L+D+ + +
Sbjct: 401 CNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICN--SLIDMYAKCGRI 458
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTA 408
D + +V MP + V W +++
Sbjct: 459 DLSRQVFDKMPAR-DIVSWNTMIAG 482
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 179/484 (36%), Positives = 268/484 (55%), Gaps = 17/484 (3%)
Query: 36 LLQKCT--HLVQF-KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L C H ++F QVHA IKA+ N + L I+ + A VF+
Sbjct: 356 ILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSL---IDMYAKCDCLTEARKVFDIFA 412
Query: 93 NPSTFAFNTVIRGYAEAGLG---HRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-- 147
FN +I GY+ G H + ++ M + P T+ LL+A L +
Sbjct: 413 ADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGL 472
Query: 148 -KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
K +H L+ K N I + + LI Y N +K ++L+FD+M K++V W +M +G+V
Sbjct: 473 SKQIHGLMFKF-GLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYV 531
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+Q E ++LF +++ S +E T V +++A NL + +LG+ H + K + N
Sbjct: 532 QQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPY 591
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+ AL DMYAKCG E+A + F ++V WNS+I A HG G +A++M +M G
Sbjct: 592 ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEG 651
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
I+P+ +T + VL+ACSHAGL+E G + F M R + +EP +HY C+V LL RA L+EA
Sbjct: 652 IEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEA 710
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
E+I MP +P A++W SLL+ CA A NVELAE A E I +P + G++ L+SNIY
Sbjct: 711 RELIEKMPTKPAAIVWRSLLSGCAKA---GNVELAEYAAEMAILSDPKDSGSFTLLSNIY 767
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
A+K W DA K+R MK +VK PG S IEIN VH F+ D H + +IY +L+ +
Sbjct: 768 ASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLL 827
Query: 507 ISLR 510
+ +R
Sbjct: 828 VQIR 831
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 187/370 (50%), Gaps = 18/370 (4%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
Q+ + ++K+ FD T L I+ + I YA LVF+ + ST + T+I G
Sbjct: 169 QLQSFLVKSRFDRDVYVGTLL---IDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCV 225
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKG---VHSLVVK---SKDFN 161
+ G + +QL+ Q++ + PD + +L AC L ++G +H+ +++ KD +
Sbjct: 226 KMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDAS 285
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
+ LI Y G V++A LFD M KN+++WT +++G+ + ++E ++LF M
Sbjct: 286 L----MNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSM 341
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
G++ + S+L++CA+L A E G VH + K + + + +L DMYAKC +
Sbjct: 342 PKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE---AVKMFWQMQMSGIKPDDVTLIAVL 338
EA +VF I +V +N++I G + G E A+ +F M+ I+P +T +++L
Sbjct: 402 TEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLL 461
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
A + + K+I + + + + ++ L+ + L ++ V M ++ +
Sbjct: 462 RASASLTSLGLSKQI-HGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVK-D 519
Query: 399 AVLWGSLLTA 408
V+W S+ +
Sbjct: 520 LVIWNSMFSG 529
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 15/247 (6%)
Query: 170 LITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREG----IDLFRKMRDSG 225
L+ Y G + A+ +F++M E+N+VTW+ M++ Y E +D +R ++S
Sbjct: 85 LMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSP 144
Query: 226 VEVNELTLVSVLSACANLGASELGKW----VHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
NE L S + AC+ L S G+W + F+ K+ + +G L D Y K G I
Sbjct: 145 ---NEYILSSFIQACSGLDGS--GRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNI 199
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
+ A VF + EK+ TW ++I G G ++++F+Q+ + PD L VL+AC
Sbjct: 200 DYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSAC 259
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
S +E GK+I ++ R Y E + L+D + + A+++ MP N +
Sbjct: 260 SILPFLEGGKQIHAHILR-YGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMP-NKNIIS 317
Query: 402 WGSLLTA 408
W +LL+
Sbjct: 318 WTTLLSG 324
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 84/167 (50%), Gaps = 15/167 (8%)
Query: 253 HEFVNKNCII----LNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
H V+ I+ L+ L L ++Y++ G + A +VF+ + E+N+ TW++++
Sbjct: 63 HNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNH 122
Query: 309 HGCGEEAVKM---FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRR---DYK 362
HG EE++ + FW+ + + P++ L + + ACS GL G+ + + ++ +
Sbjct: 123 HGFYEESLVVFLDFWRTRKN--SPNEYILSSFIQACS--GLDGSGRWMVFQLQSFLVKSR 178
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTAC 409
+ +V L+D + +D A V +P E + V W ++++ C
Sbjct: 179 FDRDVYVGTLLIDFYLKEGNIDYARLVFDALP-EKSTVTWTTMISGC 224
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 168/482 (34%), Positives = 277/482 (57%), Gaps = 20/482 (4%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESL-VNSSQIAYAHLVFNQIINPSTFAFNT 101
L K +H + I+ F +SDT +A I S+ + VF+++ ++ ++N
Sbjct: 140 LFSGKSIHGKSIRIGF----VSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNV 195
Query: 102 VIRGYAEAG---LGHRGIQLYTQMIGNGLDPDSFTYPILLKAC----GDLRQVKGVHSLV 154
+I GYA +G + QM + + PD++T LL C G + +H +
Sbjct: 196 LIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYI 255
Query: 155 VKSK---DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNY 211
VK++ +S +H LI Y V + +FD+M +NV +WTAMING+V+ +
Sbjct: 256 VKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDS 315
Query: 212 REGIDLFRKMR-DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAA 270
E + LFR M+ G+E N ++LVSVL AC++ G+ +H F + + L A
Sbjct: 316 DEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNA 375
Query: 271 LTDMYAKCGYIEEALRVFKI-VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
L DMY+KCG ++ A RVF+ L K+ +W+S+I G +HG G+EA+ ++ +M +GI+P
Sbjct: 376 LIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRP 435
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
D +T + +L+ACS +GL+ +G I+ ++ DY +EP ++ + C+VD+L RA LD A +
Sbjct: 436 DMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDF 495
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I+ MP+EP +WG+L++ D +E+ E+A LI+LEP N NYV +SN+YA+
Sbjct: 496 IKAMPVEPGPSVWGALVSCSIIHGD---LEMQELAYRFLIQLEPENPSNYVSISNLYASS 552
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+WD ++RR+MK++ + K PGCS I IN+ H F V D HP + IY+ML+ + +++
Sbjct: 553 RRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSATSIYNMLDDLLLTM 612
Query: 510 RE 511
+
Sbjct: 613 ND 614
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 197/388 (50%), Gaps = 19/388 (4%)
Query: 33 HLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
H + K L +Q H++I+ ++ T KLI + ++ LVF+ +
Sbjct: 31 HFSVTHKSLKLT--RQSHSRILSLGLSQNSLLAT---KLIFAYAICQHPYHSRLVFDSLQ 85
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHS 152
+ + F +N++I GYA+ L + QL+ QM + + PD FT L K +L + S
Sbjct: 86 HKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKS 145
Query: 153 LVVKSKDFNSVIHSLT--RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK- 209
+ KS V ++ +++ YC G+ + ++ +FD+MT +N +W +I G+
Sbjct: 146 IHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGN 205
Query: 210 -NYREGI-DLFRKMRDSGVEVNELTLVSVLSAC-ANLGASELGKWVHEFVNKNCIIL--- 263
N+RE + ++M+ V + T+ S+L C + G + G+ +H ++ KN ++L
Sbjct: 206 CNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLD 265
Query: 264 -NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM 322
+ LG L DMY++ + RVF + +NV +W ++I G +G +EA+ +F M
Sbjct: 266 SDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDM 325
Query: 323 Q-MSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRA 380
Q + GI+P+ V+L++VL ACS + G++I + +R++ E V L+D+ +
Sbjct: 326 QVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNE--VSLCNALIDMYSKC 383
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
LD A V + + +A+ W S+++
Sbjct: 384 GSLDSARRVFEDDSLCKDAISWSSMISG 411
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 133/286 (46%), Gaps = 42/286 (14%)
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
T+LI Y ++L+FD + KNV W ++ING+ K + Y E LF +M S V
Sbjct: 62 TKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVL 121
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
++ TL ++ + LGA GK +H + + + + ++ MY KCG EE+ +V
Sbjct: 122 PDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKV 181
Query: 288 FKIVLEKNVCTWNSIIGGLAIHG-CG--EEAVKMFWQMQMSGIKPDDVTLIAVLTAC-SH 343
F + +N +WN +I G A+ G C EE + QMQM ++PD T+ ++L C
Sbjct: 182 FDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGD 241
Query: 344 AGLIEKGKEIFYNMRRDYKV---EPNVKHYGCLVDLLCRARLL----------------- 383
G + G+E+ + ++ V + +V CL+D+ R+ +
Sbjct: 242 KGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFS 301
Query: 384 --------------DEAYEVIRNMP----MEPNAVLWGSLLTACAS 411
DEA + R+M +EPN V S+L AC+S
Sbjct: 302 WTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSS 347
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
N L L YA C + + VF + KNV WNS+I G A + EA ++F QM
Sbjct: 57 NSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMC 116
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
S + PDD TL + S G + GK I R V V ++ + C+
Sbjct: 117 SSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVA-NSIMSMYCKCGNF 175
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACA 410
+E+ +V M + N+ W L+ A
Sbjct: 176 EESRKVFDEMTIR-NSGSWNVLIAGYA 201
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 273/490 (55%), Gaps = 13/490 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKA-SFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LPLL + L Q + VHA ++A S + L++ + YA VF +
Sbjct: 236 LPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMA 295
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL---DPDSFTYPILLKACGDLRQV-- 147
+ ++ ++ G+ G L+ M+ GL P S L+AC +L +
Sbjct: 296 VRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASA--LRACANLSDLCL 353
Query: 148 -KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
K +H+L+ KS ++ + + L++ Y G + A LFDQM K+ V+++A+++G+V
Sbjct: 354 GKQLHALLAKS-GLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYV 412
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ E +FRKM+ V+ + T+VS++ AC++L A + GK H V I
Sbjct: 413 QNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETS 472
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+ AL DMYAKCG I+ + ++F ++ +++ +WN++I G IHG G+EA +F M+
Sbjct: 473 ICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQA 532
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
+PDDVT I +++ACSH+GL+ +GK F+ M Y + P ++HY +VDLL R LDEA
Sbjct: 533 CEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEA 592
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
Y+ I+ MP++ + +WG+LL AC N++L + + +L P GN+VL+SNI+
Sbjct: 593 YQFIQGMPLKADVRVWGALLGACRVHK---NIDLGKQVSSMIQQLGPEGTGNFVLLSNIF 649
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
+A ++D+A ++R + KE+ K+PGCS IEIN +H F+ GD H S EIY L+ +
Sbjct: 650 SAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNIL 709
Query: 507 ISLREECYAA 516
+ + + Y A
Sbjct: 710 VDINKLGYRA 719
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 165/378 (43%), Gaps = 57/378 (15%)
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
++ A +F+QI P +N +IR Y+ G + P+++T+P +LKA
Sbjct: 79 LSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKA 138
Query: 141 CG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVT 197
C DLR + VH ++ ++ + T L+ Y + A +F +M ++VV
Sbjct: 139 CSALLDLRSARAVHCHAARA-GLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVA 197
Query: 198 WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
W AM+ G+ Y + I M+D N TLV++L A GA G+ VH +
Sbjct: 198 WNAMLAGYALHGKYSDTIACLLLMQDDHAP-NASTLVALLPLLAQHGALSQGRAVHAYSV 256
Query: 258 KNCIILNDK----LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGE 313
+ C + + K +G AL DMYAKCG++ A RVF+ + +N TW++++GG + G
Sbjct: 257 RACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRML 316
Query: 314 EAVKMFWQMQMSG---IKPDDVTLIAVLTACSH--------------------------- 343
EA +F M G + P V + L AC++
Sbjct: 317 EAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAKSGLHTDLTAGN 374
Query: 344 --------AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP- 394
AGLI++ +F D V + Y LV + DEA+ V R M
Sbjct: 375 SLLSMYAKAGLIDQATTLF-----DQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQA 429
Query: 395 --MEPNAVLWGSLLTACA 410
++P+ SL+ AC+
Sbjct: 430 CNVQPDVATMVSLIPACS 447
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 182/384 (47%), Gaps = 18/384 (4%)
Query: 36 LLQKCTHLVQFKQ---VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L+ C+ L+ + VH +A T L++ + +A VF ++
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAGLHADLFVST---ALVDVYAKCASFRHAATVFRRMP 191
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKG 149
A+N ++ GYA G I M + P++ T LL G L Q +
Sbjct: 192 ARDVVAWNAMLAGYALHGKYSDTIACLLLM-QDDHAPNASTLVALLPLLAQHGALSQGRA 250
Query: 150 VHSLVVKS---KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
VH+ V++ D + T L+ Y G + A +F+ M +N VTW+A++ G V
Sbjct: 251 VHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFV 310
Query: 207 KQKNYREGIDLFRKMRDSGV-EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
E LF+ M G+ ++ ++ S L ACANL LGK +H + K+ + +
Sbjct: 311 LCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDL 370
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
G +L MYAK G I++A +F ++ K+ ++++++ G +G +EA ++F +MQ
Sbjct: 371 TAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQAC 430
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCLVDLLCRARLLD 384
++PD T+++++ ACSH ++ GK + + R E ++ + L+D+ + +D
Sbjct: 431 NVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICN--ALIDMYAKCGRID 488
Query: 385 EAYEVIRNMPMEPNAVLWGSLLTA 408
+ ++ MP + V W +++
Sbjct: 489 LSRQIFDVMPAR-DIVSWNTMIAG 511
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 9/234 (3%)
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVL 237
GD+ A+ LFDQ+ + + A+I + + R + N T VL
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
AC+ L + VH + + + + AL D+YAKC A VF+ + ++V
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YN 356
WN+++ G A+HG + + MQ P+ TL+A+L + G + +G+ + Y+
Sbjct: 197 AWNAMLAGYALHGKYSDTIACLLLMQ-DDHAPNASTLVALLPLLAQHGALSQGRAVHAYS 255
Query: 357 MR----RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+R D+K V L+D+ + L A V M + N V W +L+
Sbjct: 256 VRACSLHDHK--DGVLVGTALLDMYAKCGHLVYASRVFEAMAVR-NEVTWSALV 306
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 279/504 (55%), Gaps = 38/504 (7%)
Query: 28 TKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYA--- 84
T+ +H P +QK Q ++ I S+ +R ++ +L E++ S + A
Sbjct: 1 TRKNHANPKIQK------LNQSTSETI-VSWTSRITLLSRDGRLAEAVREFSDMRLAGIE 53
Query: 85 --HLVFNQIIN-----PS-TFAFNTVIRGYA-EAGLGHRGIQLYTQMIGNGLDPDSFTYP 135
H+ F +++ PS + ++ GYA + GL + + T ++G
Sbjct: 54 PNHITFIALLSACGNFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILG----------- 102
Query: 136 ILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNV 195
+ G LR+ + V + +D NSV + +I Y G V +A +FD+M ++++
Sbjct: 103 -MYSKSGHLRKARLVFDYI---EDKNSV--TWNTMIDGYMRNGQVDNAVDVFDKMPDRDL 156
Query: 196 VTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEF 255
++WTAMI G VK+ + E + FR+M+ SGV + + ++S ++AC NLGA G WVH +
Sbjct: 157 ISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVAACTNLGALSFGLWVHRY 216
Query: 256 VNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEA 315
V N ++ +L D+Y +CG +E A +VF + ++ V +WNS+I G A +G E+
Sbjct: 217 VLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNANES 276
Query: 316 VKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVD 375
+ F +MQ G PD VT LTACSH GL+E+G + F M+ DY++ P ++HYGCLVD
Sbjct: 277 LVYFRKMQREGFTPDGVTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPRIEHYGCLVD 336
Query: 376 LLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFN 435
L RA L++A+ V+ +MPM+PN V+ GSLL AC + G + LAE M+ + L+ +
Sbjct: 337 LYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAAC--RNHGNHTILAERLMKYITDLDVKS 394
Query: 436 DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
NYV++SN+YAA +W+ A KMRR MK + K PG S IEI+D H FM GD H +
Sbjct: 395 HSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYSSIEIDDCTHVFMAGDSAHVET 454
Query: 496 EEIYSMLEYVAISLREECYAARMP 519
I +LE ++ LR +C P
Sbjct: 455 AYIREVLELISSDLRLQCCVIETP 478
>gi|326522570|dbj|BAK07747.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 165/457 (36%), Positives = 268/457 (58%), Gaps = 13/457 (2%)
Query: 65 DTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
D + L+ N + A VF+ I+ ++N++I+ Y AG+ +++ M+
Sbjct: 166 DHTVHSLVTMYSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAGMKDDAARMFRAMVA 225
Query: 125 NG-LDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSL--TRLITFYCNFG 178
G + P++ T ++L AC GDL + + V K + SL + L+ Y G
Sbjct: 226 EGAVPPNAVTVAVVLAACRDAGDLALGRWLEEWV---KSVGMEVGSLVGSALVGMYEKCG 282
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
++ A+ +FD + K+ V W A+I G+ + +E I LF MR +G +++TLV VLS
Sbjct: 283 EMAEARRVFDAIAHKDNVAWNALITGYAQNGMSKEAISLFHSMRQAGARPDKITLVGVLS 342
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
ACA +GA ELG + + + N +G AL DMY+KCG + A++VF+ + KN +
Sbjct: 343 ACAAVGALELGTELDRYALQRGFYSNVYVGTALVDMYSKCGDLTRAIQVFEKLPCKNEAS 402
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM 357
WN++I GLA +G G+EA++ F M + G++PDD+T I VL+AC HAGL++ G+ F ++
Sbjct: 403 WNALICGLAFNGRGQEAIRQFELMRKQEGLRPDDITFIGVLSACVHAGLLKDGRRWFDSL 462
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGAN 417
++++ P ++HY C+VDLL RA L+EA++ I +P +P+AV+ G+LL AC N
Sbjct: 463 TSEFQIIPKIEHYSCMVDLLARAGHLEEAWDFIEKIPGKPDAVMLGALLAACRKCK---N 519
Query: 418 VELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIE 477
VE++ + +++ LEP N NYV+ S IYA+ + DD+ +MR LM+ER + K PGCS IE
Sbjct: 520 VEVSVRVINKIMLLEPSNSWNYVVSSKIYASSDRLDDSARMRGLMRERGVSKIPGCSWIE 579
Query: 478 INDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
++ V EF GD E++Y +L+ + +R E Y
Sbjct: 580 VSGRVLEFYAGDEPQHGVEDMYQLLDTLVDEMRLEGY 616
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 199/394 (50%), Gaps = 20/394 (5%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVN-----SSQIAYAHLVFNQ 90
L +C L +Q+HA ++ +R I + S+ + ++ Y HL+
Sbjct: 35 LHSRCHSLSTIQQLHAHLLH---HDRPIPYNHFLSKLLSISSSSSPSTAAADYVHLLLTA 91
Query: 91 IINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA---CGDLRQV 147
P+ F+FN +R +A A +QL +M+ L PD++T P LL A C
Sbjct: 92 HPTPTAFSFNVALRFFA-ASRPRTTLQLSLRMLRAALRPDAYTLPFLLLAAARCPAPAFA 150
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
H+L+ K N H++ L+T Y N G ++A+ +FD + ++VV+W +MI +
Sbjct: 151 ASAHALLQKLGLHNH-DHTVHSLVTMYSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQA 209
Query: 208 QKNYREGIDLFRKMRDSG-VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ +FR M G V N +T+ VL+AC + G LG+W+ E+V + +
Sbjct: 210 AGMKDDAARMFRAMVAEGAVPPNAVTVAVVLAACRDAGDLALGRWLEEWVKSVGMEVGSL 269
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+G+AL MY KCG + EA RVF + K+ WN++I G A +G +EA+ +F M+ +G
Sbjct: 270 VGSALVGMYEKCGEMAEARRVFDAIAHKDNVAWNALITGYAQNGMSKEAISLFHSMRQAG 329
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEI-FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
+PD +TL+ VL+AC+ G +E G E+ Y ++R + NV LVD+ + L
Sbjct: 330 ARPDKITLVGVLSACAAVGALELGTELDRYALQRGFY--SNVYVGTALVDMYSKCGDLTR 387
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVE 419
A +V +P + N W +L+ C A +G E
Sbjct: 388 AIQVFEKLPCK-NEASWNALI--CGLAFNGRGQE 418
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 268/470 (57%), Gaps = 19/470 (4%)
Query: 49 VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAE 108
VH Q+++ F + + A L++ +I AH VF++++ + +I Y +
Sbjct: 154 VHGQVVRTGFGSDLFVE---AALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQ 210
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVVKSKDFNSVIH 165
A + + L+ +M G D T + A G L R VH V N I
Sbjct: 211 AERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAV----LNGFIG 266
Query: 166 SLT---RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
++ ++ Y G+V+ A+L+FD+M E+N ++W +M++G+ + + + LF +M+
Sbjct: 267 DVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 326
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
S + N +T + ++SAC+ LG+ LG+ +H FV + + ++ L A+ DMY KCG ++
Sbjct: 327 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLD 386
Query: 283 EALRVFK--IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
A+ +F + E++V +WN +I G +HG G+EA+++F +MQ+ G++P+D+T ++L+A
Sbjct: 387 TAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSA 446
Query: 341 CSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV 400
CSHAGLI++G++ F +M + V P +KHY C+VD+L RA L+EA+ +I+ +P P+
Sbjct: 447 CSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDE 505
Query: 401 LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRR 460
+WG+LL AC N EL EIA L +LEP + G YVLMSNIYAA +W + +R+
Sbjct: 506 VWGALLLACRIH---GNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQ 562
Query: 461 LMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
MK R + K SVIE VH F D P E+Y +E +AI ++
Sbjct: 563 NMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMK 612
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 204/403 (50%), Gaps = 18/403 (4%)
Query: 20 SHKNSNTATKSHHHL--PLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVN 77
SH + A S HH LLQ CT L K +H+ + F T LA+LI
Sbjct: 13 SHTHKVLALPSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHT--PHFLARLIILYSK 70
Query: 78 SSQIAYAHLVFNQIIN--------PSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP 129
+ A +F+ + P++F NT++R YA AG + I LY M G+
Sbjct: 71 LGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGV 130
Query: 130 DSFTYPILLKACG-DLRQVKG--VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
++FTYP +LK C +L V G VH VV++ F S + L+ Y G++ A +
Sbjct: 131 NNFTYPFVLKVCASELGAVFGEVVHGQVVRT-GFGSDLFVEAALVDMYAKCGEIGDAHEV 189
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD+M ++VV WTAMI + + + + + LFRKM++ G +E+T +SV SA LG
Sbjct: 190 FDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDG 249
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
+ VH + N I + +G ++ MYAKCG +E A VF + E+N +WNS++ G
Sbjct: 250 RMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGY 309
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
+G +A+ +F QMQ S P+ VT + +++ACS+ G G+++ +N K++ +
Sbjct: 310 TQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKL-HNFVISSKMDID 368
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPM-EPNAVLWGSLLTA 408
++D+ + LD A E+ N + E + W L++
Sbjct: 369 TTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISG 411
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 275/488 (56%), Gaps = 15/488 (3%)
Query: 34 LPLLQKCT---HLVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFN 89
L +L C+ L K VHAQ + + D ++A LI + I A VF+
Sbjct: 267 LSILDGCSTPEALAWGKAVHAQCMNTGL----VDDVRVATALIRMYMGCGSIEGARRVFD 322
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQ 146
++ ++ +IRGYAE L+ M G+ PD TY ++ AC DL
Sbjct: 323 KMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSL 382
Query: 147 VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+ +HS VV++ F + + T L+ Y G +K A+ +FD M+ ++VV+W+AMI +V
Sbjct: 383 AREIHSQVVRA-GFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYV 441
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ E + F M+ + VE + +T +++L+AC +LGA +LG ++ K ++ +
Sbjct: 442 ENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIP 501
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG 326
+G AL +M K G IE A +F+ +++++V TWN +IGG ++HG EA+ +F +M
Sbjct: 502 VGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKER 561
Query: 327 IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEA 386
+P+ VT + VL+ACS AG +E+G+ F + + P ++ YGC+VDLL RA LDEA
Sbjct: 562 FRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEA 621
Query: 387 YEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIY 446
+I MP++PN+ +W +LL AC N+++AE A ER + EP++ YV +S++Y
Sbjct: 622 ELLINRMPLKPNSSIWSTLLAACRIY---GNLDVAERAAERCLMSEPYDGAVYVQLSHMY 678
Query: 447 AAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVA 506
AA W++ K+R++M+ R + K GC+ IE+ +H F+V D HP + EIY+ L +
Sbjct: 679 AAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLM 738
Query: 507 ISLREECY 514
+++ E Y
Sbjct: 739 TAIKREGY 746
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 194/410 (47%), Gaps = 20/410 (4%)
Query: 6 VPNSQLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQF---KQVHAQIIKASFDNRT 62
V + + H ++H +S T K L Q+C L KQV II++ R
Sbjct: 43 VGANDVLHRLGEGSNHIDSRTYVK------LFQRCMMLRDAGLGKQVRDHIIQS---GRQ 93
Query: 63 ISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQM 122
++ +L LI+ + A F+ + N + +N +I GYA+ G L+ QM
Sbjct: 94 LNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQM 153
Query: 123 IGNGLDPDSFTYPILLKACGD---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGD 179
+ ++P T+ I+L AC L+ K H+ V+K F S T L++ Y G
Sbjct: 154 VDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKV-GFVSDFRIGTALVSMYVKGGS 212
Query: 180 VKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSA 239
+ A+ +FD + +++V T+ MI G+ K + + LF +M+ G + N ++ +S+L
Sbjct: 213 MDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDG 272
Query: 240 CANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTW 299
C+ A GK VH ++ + ++ AL MY CG IE A RVF + ++V +W
Sbjct: 273 CSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSW 332
Query: 300 NSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN-MR 358
+I G A + E+A +F MQ GI+PD +T I ++ AC+ + + +EI +R
Sbjct: 333 TVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVR 392
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+ + V LV + + + +A +V M + V W +++ A
Sbjct: 393 AGFGTDLLVDT--ALVHMYAKCGAIKDARQVFDAMS-RRDVVSWSAMIGA 439
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 167/489 (34%), Positives = 273/489 (55%), Gaps = 18/489 (3%)
Query: 36 LLQKCTHLVQFKQ---VHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LL++CT L + KQ VH ++ + F N + + + + A VF+++
Sbjct: 97 LLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFM---YAKCGSLEIARQVFDEMC 153
Query: 93 NPSTFAFNTVIRGYAEAGLGHRG---IQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-- 147
+ ++I GY++ G + L+ +M+ +GL P+ F L+K CG L
Sbjct: 154 VKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVD 213
Query: 148 -KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
K +H K F + + L+ Y G+++ ++L+FD++ KN V+W A+I+G
Sbjct: 214 GKQIHGCCWKY-GFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFA 272
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
++ E + LF KM+ G E T ++L + + G+ E GKW+H + K+ L
Sbjct: 273 RKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGY 332
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM-S 325
+G L MYAK G I +A +VF +++ +V + NS++ G A HG G+EAV++F +M +
Sbjct: 333 VGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWV 392
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
I+P+D+T ++VLTACSHAGL+++G F M++ Y +EP + HY +VDL RA LLD+
Sbjct: 393 EIEPNDITFLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQ 451
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
A I MP+EPNA +WG+LL A + N E+ A +++++L+PF G + L+SNI
Sbjct: 452 AKSFIEEMPIEPNATIWGALLGA---SKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNI 508
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
YA+ QW D K+R+ MK+ + K P CS +EI + VH F D HP ++Y M E +
Sbjct: 509 YASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENL 568
Query: 506 AISLREECY 514
++E Y
Sbjct: 569 NQKIKEIGY 577
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 167/339 (49%), Gaps = 47/339 (13%)
Query: 122 MIGNG-LDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNF 177
+I NG L+PD Y LLK C G L+Q K VH+ ++ SK N ++ ++ Y
Sbjct: 81 LINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIK-NSILFMYAKC 139
Query: 178 GDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYRE----GIDLFRKMRDSGVEVNELTL 233
G ++ A+ +FD+M K+VVTWT+MI G+ Q Y + LF +M G+ NE L
Sbjct: 140 GSLEIARQVFDEMCVKDVVTWTSMITGY-SQDGYASSATTALVLFLEMVRDGLRPNEFAL 198
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
S++ C LG+ GK +H K N +G++L DMYA+CG + E+ VF +
Sbjct: 199 SSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELES 258
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
KN +WN++I G A G GEEA+ +F +MQ G + T A+L + S G +E+GK +
Sbjct: 259 KNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWL 318
Query: 354 FYNMRRD---------------YKVEPNVKHYGCLVDLL-------CRARLL-------- 383
+M + Y N+ + D L C + L+
Sbjct: 319 HAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLG 378
Query: 384 DEAYEVIRNM----PMEPNAVLWGSLLTACASA---DDG 415
EA E+ M +EPN + + S+LTAC+ A D+G
Sbjct: 379 KEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEG 417
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/431 (36%), Positives = 259/431 (60%), Gaps = 7/431 (1%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD--- 143
VF + ++ ++ +I GYA++G H+ ++L+++M G++P FT +L AC D
Sbjct: 269 VFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACA 328
Query: 144 LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
+ + K VH+ ++K F S ++ +T L+ Y G + A+ F+ + + ++V WT+MI
Sbjct: 329 VEEGKQVHNYLLK-LGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIA 387
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
G+V+ + + L+ +M+ G+ NELT+ SVL AC+NL A + G+ +H K + L
Sbjct: 388 GYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGL 447
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+G+AL+ MYAKCG +EE VF+ + E+++ +WN++I GL+ +G G+EA+++F +M+
Sbjct: 448 EVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMR 507
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
KPDDVT + VL+ACSH GL++ G F M ++ + P V+HY C+VD+L RA L
Sbjct: 508 QQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKL 567
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
EA E I + ++ LW LL AC + N EL A E+L++L YVL+S
Sbjct: 568 YEAKEFIESTTIDHGLCLWRILLGACRNYR---NYELGAYAGEKLMELGSQESSAYVLLS 624
Query: 444 NIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
IY A + +D ++R +MK R + K PGCS IE+ VH F+VGD HPC EI + +
Sbjct: 625 GIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEIL 684
Query: 504 YVAISLREECY 514
++ +++E Y
Sbjct: 685 RLSKQMKDEGY 695
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 204/394 (51%), Gaps = 27/394 (6%)
Query: 33 HLPLLQKCTHLVQF---------KQVHAQIIKASFDNRTISDTQLAKLIESLVN----SS 79
H L LVQF + +HAQIIK + S + L SL+N
Sbjct: 4 HPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLA------SSSSCIYLANSLINFYAKCC 57
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRG--IQLYTQMIGNGLDPDSFTYPIL 137
+ A LVF++I N ++N +I GY++ G ++L+ +M + + P++ T+ +
Sbjct: 58 HLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGI 117
Query: 138 LKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKN 194
A +L + + H++ +K F V + L+ YC G + A+ +FD+M E+N
Sbjct: 118 FTAASNLSSIFFGQQAHAVAIKMACFYDVFVG-SSLLNMYCKAGLLFEAREVFDRMPERN 176
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
VTW MI+G+ Q+ E ++F MR +VNE SVLSA A + GK +H
Sbjct: 177 EVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHC 236
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
K +++ + AL MYAKCG ++++L+VF++ +KN TW+++I G A G +
Sbjct: 237 LAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHK 296
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLV 374
A+K+F +M +GI P + TL+ VL ACS A +E+GK++ +N E + LV
Sbjct: 297 ALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQV-HNYLLKLGFESQLYIMTALV 355
Query: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
D+ ++ + ++A + N +P+ VLW S++
Sbjct: 356 DMYAKSGVTEDARKGF-NYLQQPDLVLWTSMIAG 388
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 275/475 (57%), Gaps = 13/475 (2%)
Query: 42 HLVQFKQVHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFN 100
+L+ K++HA +K D N I +T LI+ +AYA LVF+++IN ++
Sbjct: 228 YLLNGKEIHAYAMKNWLDSNLRIGNT----LIDMYSKCCCVAYAGLVFDKMINKDLISWT 283
Query: 101 TVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLR---QVKGVHSLVVKS 157
TVI YA+ ++L ++ G+D D+ L AC LR K VH +K
Sbjct: 284 TVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKR 343
Query: 158 KDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDL 217
+ ++ ++ +I Y + G++ A +F+ + K+VV+WT+MI+ +V E + +
Sbjct: 344 GLSDLMMQNM--IIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGV 401
Query: 218 FRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAK 277
F M+++ VE + +TLVS+LSA A+L A GK +H F+ + +L +L DMYA
Sbjct: 402 FYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYAC 461
Query: 278 CGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAV 337
CG +E A +VF K++ W ++I +HG G+ AV++F M+ + PD +T +A+
Sbjct: 462 CGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLAL 521
Query: 338 LTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEP 397
L ACSH+GLI +GK + M+ Y++EP +HY CLVDLL RA L+EAY +++M +EP
Sbjct: 522 LYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEP 581
Query: 398 NAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGK 457
A +W + L AC +N +L EIA ++L+ L+P + G+YVL+SN++AA +W D +
Sbjct: 582 TAEVWCAFLGACRIH---SNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEE 638
Query: 458 MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREE 512
+R MK + KNPGCS IE+ + VH F+V D HP S +IY L + L +E
Sbjct: 639 VRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKE 693
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 162/289 (56%), Gaps = 7/289 (2%)
Query: 126 GLDPDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
G+ DSFT+P +LKACG D+ + +H L++K ++S++ L++ Y D+
Sbjct: 5 GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKC-GYDSIVFVANSLVSMYAKCNDILG 63
Query: 183 AQLLFDQMTEKN-VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACA 241
A+ LFD+M E+N VV+W ++I+ + E + LFR+M+ +GV N TLV+ L AC
Sbjct: 64 ARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACE 123
Query: 242 NLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNS 301
+ +LG +H + K+ +L+ + AL M+ + G + A R+F + EK+ TWNS
Sbjct: 124 DSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNS 183
Query: 302 IIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+I G +G EA++ F +Q + +KPD+V+LI++L A G + GKEI +++
Sbjct: 184 MIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNW 243
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
++ N++ L+D+ + + A V M + + + W +++ A A
Sbjct: 244 -LDSNLRIGNTLIDMYSKCCCVAYAGLVFDKM-INKDLISWTTVIAAYA 290
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 163/317 (51%), Gaps = 9/317 (2%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS-TFAFNTVIRGY 106
++H IIK +D+ L + + I A +F+++ + ++N++I Y
Sbjct: 31 EIHGLIIKCGYDSIVFVANSLVSM---YAKCNDILGARKLFDRMNERNDVVSWNSIISAY 87
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSV 163
+ G + L+ +M G+ +++T L+AC D K +H+ ++KS V
Sbjct: 88 SLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDV 147
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ L+ + FG + A +FD++ EK+ +TW +MI G + Y E + F ++D
Sbjct: 148 -YVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQD 206
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEE 283
+ ++ +E++L+S+L+A LG GK +H + KN + N ++G L DMY+KC +
Sbjct: 207 ANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAY 266
Query: 284 ALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSH 343
A VF ++ K++ +W ++I A + C EA+K+ ++Q G+ D + + + L ACS
Sbjct: 267 AGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSG 326
Query: 344 AGLIEKGKEIF-YNMRR 359
+ KE+ Y ++R
Sbjct: 327 LRCLSHAKEVHGYTLKR 343
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 257/464 (55%), Gaps = 18/464 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS----TFAFNTV 102
KQ+H + K T L I S I A +F++ NP T +N++
Sbjct: 30 KQLHCHVFKTGCLLEPFVQTSL---ISMYGKCSLIDNARKLFDE--NPQSRKLTVCYNSL 84
Query: 103 IRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG---DLRQVKGVHSLVVK-SK 158
+ GYA + L+ +M G++ + T L++ CG +L VH VK
Sbjct: 85 LSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGL 144
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
D +S + + L+T Y G++ + LFD+M K ++TW AMING+ + ++L+
Sbjct: 145 DMDSSVGNC--LLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELY 202
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
++M G + LTLV VLS+CA+LGA +GK V + N L AL +MYA+C
Sbjct: 203 KEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARC 262
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G +++A +F + K+V +W +IIGG +HG GE AV +F +M GIKPD ++VL
Sbjct: 263 GNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVL 322
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
+ACSHAGL KG + F M R Y + P +HY C+VDLL RA L+EA E+I +M + +
Sbjct: 323 SACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRAD 382
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
LWG+LL AC NVELAE+A E++I+LEP N G YVL+SN+Y + ++
Sbjct: 383 GALWGALLGACKIH---RNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRV 439
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
R LM++R + K+PGCS +E VH F GD HP + EIY L
Sbjct: 440 RMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKL 483
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 153/292 (52%), Gaps = 12/292 (4%)
Query: 122 MIGNGLDPDSFTYPILLKACGDLR---QVKGVHSLVVKSKDFNSVIHSL--TRLITFYCN 176
M+ +G P++FT+P +K+C L K +H V K+ ++ T LI+ Y
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKT---GCLLEPFVQTSLISMYGK 57
Query: 177 FGDVKSAQLLFDQ--MTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLV 234
+ +A+ LFD+ + K V + ++++G+ ++ + LF +MR+ GVE+N +T++
Sbjct: 58 CSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTML 117
Query: 235 SVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEK 294
++ C G LG VH F K + ++ +G L MY K G I+ ++F + K
Sbjct: 118 GLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRK 177
Query: 295 NVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
+ TWN++I G A +G ++++ +M+ G PD +TL+ VL++C+H G + GKE+
Sbjct: 178 GLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVE 237
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
M + N LV++ R L +A ++ MP++ + V W +++
Sbjct: 238 RKM-EGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVK-SVVSWTAII 287
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 91/200 (45%), Gaps = 4/200 (2%)
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M SG N T + +CA L GK +H V K +L + +L MY KC
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 281 IEEALRVFKIVLEKNVCT--WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
I+ A ++F + T +NS++ G A++ ++ V +F +M+ G++ + VT++ ++
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
C G + G + + + ++ + CL+ + ++ +D ++ MP +
Sbjct: 121 QPCGIPGNLGLGMCV-HGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRK-G 178
Query: 399 AVLWGSLLTACASADDGANV 418
+ W +++ A NV
Sbjct: 179 LITWNAMINGYAQNGLANNV 198
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 273/487 (56%), Gaps = 11/487 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
LP + + L K +H ++ SFDN + T L++ + YA +F+ +
Sbjct: 217 LPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT---GLLDMYAKCQCLLYARKIFDVMGV 273
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDPDSFTYPILLKACG---DLRQVKG 149
+ +++ +I GY + ++L+ QMI + +DP T +L+AC DL + +
Sbjct: 274 RNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRK 333
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H ++K ++ T L++ Y G + A FD M K+ V+++A+++G V+
Sbjct: 334 LHCYIIKLGXVLDILLGNT-LLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNG 392
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
N + +FR M+ SG++ + T++ VL AC++L A + G H ++ + +
Sbjct: 393 NAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICN 452
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
AL DMY+KCG I A VF + ++ +WN++I G IHG G EA+ +F + G+KP
Sbjct: 453 ALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKP 512
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
DD+T I +L++CSH+GL+ +G+ F M RD+ + P ++H C+VD+L RA L+DEA+
Sbjct: 513 DDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHF 572
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
IRNMP EP+ +W +LL+AC N+EL E +++ L P + GN+VL+SNIY+A
Sbjct: 573 IRNMPFEPDVRIWSALLSACRIHK---NIELGEEVSKKIQSLGPESTGNFVLLSNIYSAA 629
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
+WDDA +R K+ + K PGCS IEIN +VH F+ GD H +I LE + + +
Sbjct: 630 GRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEM 689
Query: 510 REECYAA 516
+ Y A
Sbjct: 690 KRLGYQA 696
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 204/408 (50%), Gaps = 14/408 (3%)
Query: 33 HLPLLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQ-LAKLIESLVNSSQIAYAHLVF 88
+L LL+ C L + K++H +K N + +D+ L KL ++ +Q+ A +F
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLK----NTSNADSSVLHKLTRLYLSCNQVVLARRLF 66
Query: 89 NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK 148
++I NPS +N +IR YA G I LY M+ G+ P+ +TYP +LKAC L ++
Sbjct: 67 DEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIE 126
Query: 149 GVHSLVVKSKDFN--SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
+ +K F S + T L+ FY G + AQ LF M+ ++VV W AMI G
Sbjct: 127 DGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCS 186
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
+ + L +M++ G+ N T+V VL A GK +H + +
Sbjct: 187 LYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVV 246
Query: 267 LGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM-S 325
+G L DMYAKC + A ++F ++ +N +W+++IGG C +EA+++F QM +
Sbjct: 247 VGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKD 306
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
+ P VTL +VL AC+ + +G+++ + + V ++ L+ + + ++D+
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXV-LDILLGNTLLSMYAKCGVIDD 365
Query: 386 AYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
A M ++V + ++++ C + A V L+ M +L ++P
Sbjct: 366 AIRFFDXMN-PKDSVSFSAIVSGCVQNGNAA-VALSIFRMMQLSGIDP 411
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 163/334 (48%), Gaps = 16/334 (4%)
Query: 134 YPILLKAC---GDLRQVKGVHSLVVK--SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFD 188
Y LL+AC L + K +H +K S +SV+H LTRL Y + V A+ LFD
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRL---YLSCNQVVLARRLFD 67
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
++ +V+ W +I + + IDL+ M GV N+ T VL AC+ L A E
Sbjct: 68 EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G +H + + + AL D YAKCG + EA R+F + ++V WN++I G ++
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187
Query: 309 HGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNV 367
+G ++AV++ QMQ GI P+ T++ VL A + GK + Y +RR + + V
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSF--DNGV 245
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
L+D+ + + L A ++ M + N V W +++ +D E E+ +
Sbjct: 246 VVGTGLLDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGGYVXSD--CMKEALELFDQM 302
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
++K D V + ++ A A+ D + R+L
Sbjct: 303 ILK--DAMDPTPVTLGSVLRACAKLTDLSRGRKL 334
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 169/473 (35%), Positives = 262/473 (55%), Gaps = 33/473 (6%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDP 129
L++ N Q LVF+ ++ + +N ++ GYA + ++L+ +MI P
Sbjct: 576 LVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCP 635
Query: 130 DSFTYPILLKACGDLR---QVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
++ T+ +L AC + +G+H +VK + F + L+ Y G V+ ++ +
Sbjct: 636 NATTFASVLPACVRCKVFSDKEGIHGYIVK-RGFGKDKYVQNALMDMYSRMGRVEISKTI 694
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR----------------DSGV--EV 228
F +M ++++V+W MI G + Y + ++L +M+ D GV +
Sbjct: 695 FGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKP 754
Query: 229 NELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF 288
N +TL++VL CA L A GK +H + K + ++ +G+AL DMYAKCG + A RVF
Sbjct: 755 NSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVF 814
Query: 289 KIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSG------IKPDDVTLIAVLTACS 342
+ +NV TWN +I +HG GEEA+++F M G I+P++VT IA+ ACS
Sbjct: 815 DQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACS 874
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAV-L 401
H+G++++G +F+ M+ + VEP HY CLVDLL R+ + EAYE+I MP N V
Sbjct: 875 HSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDA 934
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
W SLL AC +VE EIA + L LEP +YVLMSNIY++ WD A +R+
Sbjct: 935 WSSLLGACRIHQ---SVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKK 991
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
MKE + K PGCS IE D VH+F+ GD HP S+E++ LE ++ +R+E Y
Sbjct: 992 MKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGY 1044
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 179/383 (46%), Gaps = 18/383 (4%)
Query: 47 KQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
KQ+HA + K F + S +A L+ + A VF+ I + ++N++I
Sbjct: 350 KQIHAHVFK--FGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIAT 407
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC----GDLRQVKGVHSLVVKSKDFN 161
+ L+ M+ +DP SFT + AC G +R K VH+ +++ D
Sbjct: 408 LCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLR 467
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
+ ++ L+T Y G V A+ LF K++V+W +I+ + + E + M
Sbjct: 468 T--YTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLM 525
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC-IILNDKLGAALTDMYAKCGY 280
GV + +TL SVL AC+ L +G+ +H + +N +I N +G AL DMY C
Sbjct: 526 IVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQ 585
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM-QMSGIKPDDVTLIAVLT 339
++ VF V+ + V WN+++ G A + ++A+++F +M S P+ T +VL
Sbjct: 586 PKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLP 645
Query: 340 ACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
AC + + I Y ++R + + V++ L+D+ R ++ + + M +
Sbjct: 646 ACVRCKVFSDKEGIHGYIVKRGFGKDKYVQN--ALMDMYSRMGRVEISKTIFGRMNKR-D 702
Query: 399 AVLWGSLLTA---CASADDGANV 418
V W +++T C DD N+
Sbjct: 703 IVSWNTMITGCIVCGRYDDALNL 725
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 142/286 (49%), Gaps = 7/286 (2%)
Query: 130 DSFTYPILLKACG---DLRQVKGVHSLVVK-SKDFNSVIHSLTRLITFYCNFGDVKSAQL 185
D+F +P +LKA DL K +H+ V K S + L+ Y GD+ +A+
Sbjct: 329 DNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQ 388
Query: 186 LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL-G 244
+FD + +++ V+W +MI + + + + LFR M V+ TLVSV AC+++ G
Sbjct: 389 VFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRG 448
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
LGK VH + +N L AL MYA+ G + +A +F + K++ +WN++I
Sbjct: 449 GVRLGKQVHAYTLRNGD-LRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVIS 507
Query: 305 GLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVE 364
L+ + EEA+ + M + G++PD VTL +VL ACS + G+EI R+ +
Sbjct: 508 SLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLI 567
Query: 365 PNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
N LVD+ C + + V + AV W +LL A
Sbjct: 568 ENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAV-WNALLAGYA 612
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 168/470 (35%), Positives = 269/470 (57%), Gaps = 47/470 (10%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC-- 141
A F+ + S ++N ++ GYA+ GL ++L+ +M+ G++PD T+ ++ AC
Sbjct: 213 ARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSS 272
Query: 142 -GD----LRQVKGVHSLVVKSKDF-----------------------------NSVIHSL 167
GD V+ +H ++ F NSV +
Sbjct: 273 RGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSV--TW 330
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG-V 226
+I+ Y G++ SA+ LF+ M +NVVTW +MI G+ + I+LF++M + +
Sbjct: 331 NAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKL 390
Query: 227 EVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR 286
+E+T+VSV+SAC +LGA ELG WV F+ +N I L+ A+ MY++CG +E+A R
Sbjct: 391 TPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKR 450
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGL 346
VF+ + ++V ++N++I G A HG G EA+ + M+ GI+PD VT I VLTACSHAGL
Sbjct: 451 VFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGL 510
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+E+G+++F +++ +P + HY C+VDLL R L++A + MPMEP+A ++GSLL
Sbjct: 511 LEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLL 565
Query: 407 TACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERN 466
A + VEL E+A +L +LEP N GN++L+SNIYA+ +W D ++R MK+
Sbjct: 566 NA---SRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGG 622
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
+ K G S +E +H+F+V D H S++IY +L + +RE Y A
Sbjct: 623 VKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIA 672
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 212/468 (45%), Gaps = 104/468 (22%)
Query: 45 QFKQVHAQIIKASFDNRTISDTQLAKLIESLVN-SSQIAYAHLVFNQIINPSTFAFNTVI 103
+Q+HAQII S + + +A LI + Y HL+FN +NP+ F F +++
Sbjct: 16 HLRQLHAQIIHNSLHHH---NYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSML 72
Query: 104 RGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVK----SKD 159
R Y+ + + ++ M G G+ PD+F YPIL+K+ G+ G H+ V+K S
Sbjct: 73 RFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGN--GGIGFHAHVLKLGHGSDA 130
Query: 160 F--NSVIHSLTRL--------------------------ITFYCNFGDVKSAQLLFDQMT 191
F N+VI RL ++ Y + AQ LFD M
Sbjct: 131 FVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMP 190
Query: 192 EKNVVTWTAMINGHVKQKNYR-------------------------------EGIDLFRK 220
E+NV+TWTAM+ G+ K K+ E + LF +
Sbjct: 191 ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDE 250
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M ++G+E +E T V+V+SAC++ G L + +++ I LN + AL DMYAKCG
Sbjct: 251 MVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGS 310
Query: 281 IEEALRV--------------------------------FKIVLEKNVCTWNSIIGGLAI 308
I A R+ F + +NV TWNS+I G A
Sbjct: 311 IGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQ 370
Query: 309 HGCGEEAVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
+G A+++F +M + PD+VT+++V++AC H G +E G + + + +++ ++
Sbjct: 371 NGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTEN-QIKLSI 429
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
+ ++ + R +++A V + M + V + +L++ A+ G
Sbjct: 430 SGHNAMIFMYSRCGSMEDAKRVFQEMATR-DVVSYNTLISGFAAHGHG 476
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 124/244 (50%), Gaps = 10/244 (4%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDP 129
+I + + A +FN + + +N++I GYA+ G I+L+ +MI L P
Sbjct: 333 MISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTP 392
Query: 130 DSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLT---RLITFYCNFGDVKSAQLL 186
D T ++ ACG L ++ + + VV+ N + S++ +I Y G ++ A+ +
Sbjct: 393 DEVTMVSVISACGHLGALE-LGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRV 451
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
F +M ++VV++ +I+G + E I+L M++ G+E + +T + VL+AC++ G
Sbjct: 452 FQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLL 511
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVF-KIVLEKNVCTWNSIIGG 305
E G+ V E + I D A + D+ + G +E+A R ++ +E + + S++
Sbjct: 512 EEGRKVFESIKDPAI---DHY-ACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNA 567
Query: 306 LAIH 309
IH
Sbjct: 568 SRIH 571
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 155/476 (32%), Positives = 271/476 (56%), Gaps = 17/476 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+Q+H+ I++ + + L + + VF+++ + S ++ +I GY
Sbjct: 289 RQLHSWAIRSGLADDV--ECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGY 346
Query: 107 AE-AGLGHRGIQLYTQMIGNG-LDPDSFTYPILLKACGDL------RQVKGVHSLVVKSK 158
+ L I L+++MI G ++P+ FT+ KACG++ +QV G H+ +
Sbjct: 347 MQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLG-HAF---KR 402
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
S +I+ + ++ A+ F+ ++EKN+V++ ++G + ++ +L
Sbjct: 403 GLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELL 462
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
++ + + V+ T S+LS AN+G+ G+ +H V K + N + AL MY+KC
Sbjct: 463 SEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKC 522
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G I+ A RVF ++ +NV +W S+I G A HG E ++ F QM G+KP++VT +A+L
Sbjct: 523 GSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAIL 582
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
+ACSH GL+ +G F +M D+K++P ++HY C+VDLLCRA LL +A+E I MP + +
Sbjct: 583 SACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD 642
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
++W + L AC +N EL ++A ++++ +P Y+ +SNIYA+ +W+++ +M
Sbjct: 643 VLVWRTFLGACRVH---SNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEM 699
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
RR MKERN+VK GCS IE+ D VH+F VGD HP + +IY L+++ ++ Y
Sbjct: 700 RRKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEIKRCGY 755
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 116/487 (23%), Positives = 214/487 (43%), Gaps = 67/487 (13%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF---N 89
LL+ C F K VHA++I+ + ++ L L S + A VF
Sbjct: 68 LLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYS---KSGDLTKAKDVFETMG 124
Query: 90 QIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV-- 147
+ +++ ++ + G I+L+ + + GL P+ + Y +++AC + V
Sbjct: 125 RFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 148 -KGVHSLVVKSKDFNSVIHSLTRLITFYCNF-GDVKSAQLLFDQMTEKNVVTWTAMINGH 205
+ + ++K+ F S + LI + ++A +FD+M+E NVVTWT MI
Sbjct: 185 GRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 206 VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
++ RE I F M SG E ++ TL SV SACA L LG+ +H + ++ L D
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSG--LAD 302
Query: 266 KLGAALTDMYAKC---GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC--GEEAVKMFW 320
+ +L DMYAKC G +++ +VF + + +V +W ++I G + C EA+ +F
Sbjct: 303 DVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGY-MQNCNLATEAINLFS 361
Query: 321 QMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKV--------------- 363
+M G ++P+ T + AC + GK++ + +R
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKC 421
Query: 364 --------------EPNVKHYGCLVDLLCRARLLDEAYEVIRNMP---MEPNAVLWGSLL 406
E N+ Y +D CR + A+E++ + + +A + SLL
Sbjct: 422 DRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLL 481
Query: 407 TACASADDGANVELAEIAMERLIKL-----EPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
+ A+ ++ E +++KL +P + + ++Y+ D A ++ L
Sbjct: 482 SGVANV---GSLRKGEQIHSQVLKLGLSCNQPVCNA----LISMYSKCGSIDTASRVFSL 534
Query: 462 MKERNIV 468
M RN++
Sbjct: 535 MDNRNVI 541
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 127/267 (47%), Gaps = 13/267 (4%)
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVE-VNELTLVSVLSACANLGASELGKWVHEFVNKN 259
+I H+ + R + M G+ ++ +T S+L +C LGK VH + +
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEF 91
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIV---LEKNVCTWNSIIGGLAIHGCGEEAV 316
I + L +L +Y+K G + +A VF+ + +++V +W++++ +G +A+
Sbjct: 92 EIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAI 151
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGC-LVD 375
K+F + G+ P+D AV+ ACS++ + G+ I + + E +V GC L+D
Sbjct: 152 KLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDV-CVGCSLID 210
Query: 376 LLCRAR-LLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
+ + + AY+V M E N V W ++T C G E ++ + L F
Sbjct: 211 MFVKGENSFENAYKVFDKMS-ELNVVTWTLMITRCMQM--GFPREAIRFFLDMV--LSGF 265
Query: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRL 461
+ L S++++A A+ ++ R+L
Sbjct: 266 ESDKFTL-SSVFSACAELENLSLGRQL 291
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 272/480 (56%), Gaps = 27/480 (5%)
Query: 48 QVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
QVH +IK+ D+ + + S ++ A VF+ + N + ++N++I G+
Sbjct: 214 QVHTMVIKSGLDSTIFVGNSMVNMYS---KSLMVSDAKAVFDSMENRNAVSWNSMIAGFV 270
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKS-KDFNSV 163
GL +L+ +M G+ + ++K C +++++ K +H V+K+ DF+
Sbjct: 271 TNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLN 330
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTE-KNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
I T L+ Y ++ A LF M +NVV+WTA+I+G+V+ ++LF +MR
Sbjct: 331 IK--TALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMR 388
Query: 223 -DSGVEVNELTLVSVLSACANLGAS-ELGKWVHE------FVNKNCIILNDKLGAALTDM 274
+ GVE NE T SVL+ACA AS E GK H F N C+ +AL M
Sbjct: 389 REEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCV------SSALVTM 442
Query: 275 YAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTL 334
YAK G IE A VFK +++++ +WNS+I G A HGCG++++K+F +M+ ++ D +T
Sbjct: 443 YAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITF 502
Query: 335 IAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMP 394
I V++AC+HAGL+ +G+ F M +DY + P ++HY C+VDL RA +L++A ++I MP
Sbjct: 503 IGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMP 562
Query: 395 MEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDD 454
A +W +LL AC NV+L E+A E+LI L+P + YVL+SNIYA W +
Sbjct: 563 FPAGATIWRTLLAACRVH---LNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQE 619
Query: 455 AGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
K+R+LM + + K G S IE+ + FM GD HP S+ IY LE ++I L++ Y
Sbjct: 620 RAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGY 679
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 189/371 (50%), Gaps = 14/371 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRG 105
KQVH Q IK F + D + L++ + + + VF+++ + ++ +++ G
Sbjct: 112 KQVHCQCIKCGF----VEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167
Query: 106 YAEAGLGHRGIQLYTQMIGNGLDPDSFTYPIL---LKACGDLRQVKGVHSLVVKSKDFNS 162
Y + GL + ++L++QM G+ P+ FT+ + L A G + + VH++V+KS +S
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS-GLDS 226
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
I ++ Y V A+ +FD M +N V+W +MI G V E +LF +MR
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
GV++ + +V+ CAN+ K +H V KN + + AL Y+KC I+
Sbjct: 287 LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEID 346
Query: 283 EALRVFKIVLE-KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQM-SGIKPDDVTLIAVLTA 340
+A ++F ++ +NV +W +II G +G + A+ +F QM+ G++P++ T +VL A
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNA 406
Query: 341 CSH-AGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNA 399
C+ +E+GK+ F++ + LV + + ++ A EV + ++ +
Sbjct: 407 CAAPTASVEQGKQ-FHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ-VDRDL 464
Query: 400 VLWGSLLTACA 410
V W S+++ A
Sbjct: 465 VSWNSMISGYA 475
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 146/298 (48%), Gaps = 7/298 (2%)
Query: 115 GIQLYTQMIGNGLDPDSFTYPILLKACGDL--RQV-KGVHSLVVKSKDFNSVIHSLTRLI 171
+ L+ + +G D + +LK CG L R V K VH +K F + T L+
Sbjct: 76 ALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKC-GFVEDVSVGTSLV 134
Query: 172 TFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNEL 231
Y V+ + +FD+M KNVV+WT+++ G+ + + + LF +M+ G++ N
Sbjct: 135 DMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPF 194
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
T +VL A GA E G VH V K+ + +G ++ +MY+K + +A VF +
Sbjct: 195 TFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSM 254
Query: 292 LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGK 351
+N +WNS+I G +G EA ++F++M++ G+K V+ C++ + K
Sbjct: 255 ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAK 314
Query: 352 EIFYN-MRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
++ ++ + N+K L+ + +D+A+++ M N V W ++++
Sbjct: 315 QLHCQVIKNGSDFDLNIKT--ALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISG 370
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 262/443 (59%), Gaps = 20/443 (4%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG----LDPDS----FTYP 135
A F++I +P+ + GY L + + L+ ++I +G +D + F+
Sbjct: 144 ARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFRKLIASGSATAVDEAAALVAFSAS 203
Query: 136 ILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG--DVKSAQLLFDQMTEK 193
+ CG +H+LVVK+ + + ++ Y G D+ +A+ +FD M EK
Sbjct: 204 ARIPDCG---ITSSLHALVVKT-GLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM-EK 258
Query: 194 NVVTWTAMINGHVKQKNYREGIDLFRKMRD--SGVEVNELTLVSVLSACANLGASELGKW 251
+VV+W +MI + + + + L+RKM + ++ N +TL ++L ACA+ G + GK
Sbjct: 259 DVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKC 318
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
+H V + + N +G ++ DMY+KCG +E A + F+ + EKN+ +W+++I G +HG
Sbjct: 319 IHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGH 378
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYG 371
G+EA+ +F +M SG P+ +T I+VL ACSHAGL++KG+ + M++ + +EP V+HYG
Sbjct: 379 GQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYG 438
Query: 372 CLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKL 431
C+VDLL RA LDEAY +I+ M ++P+A +WG+LL+AC NVELAEI+ +RL +L
Sbjct: 439 CMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHK---NVELAEISAKRLFEL 495
Query: 432 EPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGR 491
+ N G YVL+SNIYA W D +MR L+K R I K PG S +E+ H F VGD
Sbjct: 496 DATNCGYYVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDKS 555
Query: 492 HPCSEEIYSMLEYVAISLREECY 514
HP +EIYS L + ++E Y
Sbjct: 556 HPQHKEIYSYLGKLLEKMQEAGY 578
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 136/270 (50%), Gaps = 15/270 (5%)
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ +H L ++S F S S + L+ Y + A+ FD++ N V TAM +G+V+
Sbjct: 109 RQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVR 168
Query: 208 QKNYREGIDLFRKMRDSG--VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+ LFRK+ SG V+E + SA A + + +H V K + +
Sbjct: 169 NNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDA 228
Query: 266 KLGAALTDMYAKCGY--IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM- 322
+ + D YAK G + A +VF +EK+V +WNS+I A +G +A+ ++ +M
Sbjct: 229 GVVNTMLDAYAKGGRRDLGAARKVFD-TMEKDVVSWNSMIALYAQNGMSADALGLYRKML 287
Query: 323 QMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC--- 378
+SG IK + VTL A+L AC+HAG I+ GK I + R +E NV +VD+
Sbjct: 288 NVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVR-MGLEENVYVGTSVVDMYSKCG 346
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
R + +A++ I+ E N + W +++T
Sbjct: 347 RVEMARKAFQKIK----EKNILSWSAMITG 372
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 266/461 (57%), Gaps = 13/461 (2%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHL-VFNQIINPSTFAFNT 101
L Q Q+HA I+K F +TI ++ + +L + +Q+ L VF++ S+ +++
Sbjct: 41 LRQGLQLHAHILK--FGLQTIP--LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSS 96
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK 158
VI +A+ +Q + +M+ +G+ PD YP KACG LR+ K VH L VK+
Sbjct: 97 VISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTG 156
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
+ V + L+ Y G++ A+ LFD+M E+NVV+W+ MI G+ + + E + LF
Sbjct: 157 YYCDVFVG-SSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLF 215
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
++ V+VN+ T SV+ C++ ELGK +H K + +G+AL +Y+KC
Sbjct: 216 KQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKC 275
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G IE A +VF + +N+ WNS++ A H + +F +M G+KP+ + ++VL
Sbjct: 276 GVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVL 335
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
ACSHAGL+EKG+E ++++ RDY +EP +HY LVDLL RA L EA VI+ MPM P
Sbjct: 336 YACSHAGLVEKGRE-YFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPT 394
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
+WG+LLT C D E+A +R+++++ + G +VL+SN YAA ++++A +M
Sbjct: 395 ESVWGALLTGCRIHKD---TEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARM 451
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIY 499
R+++++R + K G S +E + VH F GD H EIY
Sbjct: 452 RKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIY 492
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 273/509 (53%), Gaps = 46/509 (9%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
++ K HL KQV + +I + + +L + + ++YA +F++ P+
Sbjct: 30 VISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCT--LRLCNLSYARFIFDRFSFPN 87
Query: 96 TFAFNTVIRGYAEAGLGH--RGIQLYTQMIGNGLD-PDSFTYPILLKACGDLRQVKG--- 149
T + V+ Y+ + H + M+ + P+ F YP++LK+ L
Sbjct: 88 THLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPL 147
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
VH+ + KS V+ L ++ + + A+ LFD+M+E+NVV+WTAM++G+ +
Sbjct: 148 VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSG 207
Query: 210 N-------------------------------YREGIDLFRKM-RDSGVEVNELTLVSVL 237
+ + E + LFR+M + + NE+T+V VL
Sbjct: 208 DISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVL 267
Query: 238 SACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVC 297
SACA G +L K +H F + + + + +L D+Y KCG +EEA VFK+ +K++
Sbjct: 268 SACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLT 327
Query: 298 TWNSIIGGLAIHGCGEEAVKMFWQM---QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF 354
WNS+I A+HG EEA+ +F +M ++ IKPD +T I +L AC+H GL+ KG+ F
Sbjct: 328 AWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYF 387
Query: 355 YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
M + +EP ++HYGCL+DLL RA DEA EV+ M M+ + +WGSLL AC
Sbjct: 388 DLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNAC---KI 444
Query: 415 GANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCS 474
+++LAE+A++ L+ L P N G +M+N+Y W++A + R+++K +N K PG S
Sbjct: 445 HGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWS 504
Query: 475 VIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
IEI++ VH+F D HP +EEIY +L+
Sbjct: 505 RIEIDNEVHQFYSLDKSHPETEEIYMILD 533
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 162/479 (33%), Positives = 270/479 (56%), Gaps = 38/479 (7%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI-GNGLDP 129
L+ +S + A +F+++ + ++ T++ GYA GL +++ +M+ G P
Sbjct: 172 LVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWP 231
Query: 130 DSFTYPILLKACGDLRQV---KGVHSLVVKSKDFNSV----------------------- 163
+ T A G + + + VH VV+S SV
Sbjct: 232 NEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIF 291
Query: 164 -------IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID 216
++S T +++ Y GD+++A LF ++ +N V+W+ M+ + + E +
Sbjct: 292 DGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMR 351
Query: 217 LFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE-FVNKNCIILNDKLGAALTDMY 275
+F M +GVE + TLVSVLSACA LG ++G+ +++ ++ + + L L A DM+
Sbjct: 352 IFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMF 411
Query: 276 AKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
AKCG + A R+F+ + +KNV +WN++I A+HG EEA+ +F + + GI PD++T I
Sbjct: 412 AKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYI 471
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
VL+ACSH+GL+ +G+ F M+ Y +EP +HY C++DLL + LL+EA+EV R+MP+
Sbjct: 472 GVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPV 531
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
+ WG+LL AC NVE+ + A ++L+ L+P + G YVLMS IYA+K++W
Sbjct: 532 GADEAGWGALLNACRMH---GNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQV 588
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
+R +M++R + KNPGCS IE++ HEF+ D H SE+IY+ LE + + + E Y
Sbjct: 589 KMIRTVMRDRGVKKNPGCSSIEVDGKFHEFLAADVSHAHSEDIYAALENIYLHSKLEGY 647
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 192/413 (46%), Gaps = 36/413 (8%)
Query: 30 SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFN 89
+H L LL+ C + Q+ A + + ++L +L + ++A+A V
Sbjct: 31 THPLLSLLESCASFRRLLQLQALLTVSGLAAHRFPASRLLAFC-ALSDPPRLAHAAAVLA 89
Query: 90 QII-NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACG-DLRQV 147
Q P+ + T++RG+ AG + L+ +++ + L D+ T +KA
Sbjct: 90 QCAEGPNAYMLATMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATTSSSPA 149
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ +H + K + L+ Y + + A+ LFD+M +++VV+WT +++G+ +
Sbjct: 150 EAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYAR 209
Query: 208 QKNYREGIDLF-RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDK 266
E +F R + G NE+TLV+ SA +G LG+ VH+ V ++ + ++
Sbjct: 210 GGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVN 269
Query: 267 LGAALTDM-------------------------------YAKCGYIEEALRVFKIVLEKN 295
L AL DM YAKCG +E A ++FK + +N
Sbjct: 270 LENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRN 329
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFY 355
+W+ ++ + EEA+++F M +G++P D TL++VL+AC+ G ++ G+ ++
Sbjct: 330 AVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYD 389
Query: 356 NMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+KVE V +D+ + + A + RNM + N V W +++ A
Sbjct: 390 AYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNME-DKNVVSWNTMIVA 441
>gi|414873430|tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea mays]
Length = 536
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 259/470 (55%), Gaps = 52/470 (11%)
Query: 83 YAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC- 141
+A +F+++ +P + + R +A +G + + ++ MI +G+ PD+ + L AC
Sbjct: 65 HARDLFDEMPDPGLVSRTAMARAHAASGQAAQALAVFRDMIADGVLPDNVALAVALAACH 124
Query: 142 -----------GDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
R K VH+++V S V S T LI Y +G++ ++ LFD M
Sbjct: 125 TTASLPAAGMAAARRPGKMVHAIIVTSGIVPDVFVS-TELIRVYGEYGELALSRRLFDAM 183
Query: 191 TEKNVVTWTAMINGHVKQKNYREGIDLFRKM--RD------------------------- 223
++ V+W AM++ +++ N + +LF M RD
Sbjct: 184 PVRSTVSWNAMVHQYIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEALELSR 243
Query: 224 -------SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYA 276
V N T+ +VL+ACA G E G WVH FV++N + + L +L DMY
Sbjct: 244 QMISPSSCPVYPNGPTMSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYV 303
Query: 277 KCGYIEEALRVFKIVLE-KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
KCG IE+AL+VF+ E +++ +W ++I GLA+HG +A+KMF MQ +GI PDDVTL+
Sbjct: 304 KCGSIEKALQVFEKAPEARDLYSWTTMICGLAMHGRAADALKMFGMMQDNGIHPDDVTLV 363
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
VL AC+H GL+++G FY++ + Y + P ++HYGC++DLL R L EAY +IR M M
Sbjct: 364 GVLNACAHCGLVDEGLRHFYSLEK-YAITPKIEHYGCVIDLLGRVGRLQEAYNIIRTMRM 422
Query: 396 EPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDA 455
+PNAV+WG+ L AC +NVEL EIA L +L+P + V++S++YA W+
Sbjct: 423 KPNAVIWGAFLNACKVH---SNVELGEIAAAELTRLDPGDPWAKVMLSSLYAKLQDWNSL 479
Query: 456 GKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYV 505
+ RR M I K PGCS IE++ VHEF+ G +HP EI ++LE V
Sbjct: 480 ARERREMNNLQIKKTPGCSSIELDGEVHEFVAGGFQHPQHGEICTVLENV 529
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 122/263 (46%), Gaps = 14/263 (5%)
Query: 58 FDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGI 116
FD + T ++ + S + A+ +F + ++NT+I GY+ G +
Sbjct: 180 FDAMPVRSTVSWNAMVHQYIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEAL 239
Query: 117 QLYTQMIGNG---LDPDSFTYPILLKAC---GDLRQVKGVHSLVVKSK--DFNSVIHSLT 168
+L QMI + P+ T +L AC G L VH+ V +++ D S+ S
Sbjct: 240 ELSRQMISPSSCPVYPNGPTMSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRS-- 297
Query: 169 RLITFYCNFGDVKSAQLLFDQMTE-KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
LI Y G ++ A +F++ E +++ +WT MI G + + +F M+D+G+
Sbjct: 298 -LIDMYVKCGSIEKALQVFEKAPEARDLYSWTTMICGLAMHGRAADALKMFGMMQDNGIH 356
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+++TLV VL+ACA+ G + G + K I + + D+ + G ++EA +
Sbjct: 357 PDDVTLVGVLNACAHCGLVDEGLRHFYSLEKYAITPKIEHYGCVIDLLGRVGRLQEAYNI 416
Query: 288 FKIV-LEKNVCTWNSIIGGLAIH 309
+ + ++ N W + + +H
Sbjct: 417 IRTMRMKPNAVIWGAFLNACKVH 439
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 44/304 (14%)
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H L+ K ++ H T L++ Y G + A+ LFD+M + +V+ TAM H
Sbjct: 33 IHGLLFKEGLLHAGAHLPTALLSAYAALGRPRHARDLFDEMPDPGLVSRTAMARAHAASG 92
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSAC---ANLGASEL------GKWVHEFVNKNC 260
+ + +FR M GV + + L L+AC A+L A+ + GK VH + +
Sbjct: 93 QAAQALAVFRDMIADGVLPDNVALAVALAACHTTASLPAAGMAAARRPGKMVHAIIVTSG 152
Query: 261 IILNDKLGAALTDMYAKCG--------------------------YIE-----EALRVFK 289
I+ + + L +Y + G YI +A +F
Sbjct: 153 IVPDVFVSTELIRVYGEYGELALSRRLFDAMPVRSTVSWNAMVHQYIRHSNVGDAYELFL 212
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM---QMSGIKPDDVTLIAVLTACSHAGL 346
+ ++V +WN++I G ++ G EA+++ QM + P+ T+ VL AC+ AG
Sbjct: 213 AMPRRDVVSWNTMIAGYSLVGRFMEALELSRQMISPSSCPVYPNGPTMSTVLAACAGAGC 272
Query: 347 IEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
+E G + + R+ ++ + L+D+ + +++A +V P + W +++
Sbjct: 273 LETGIWVHAFVDRN-RMNDDGSLDRSLIDMYVKCGSIEKALQVFEKAPEARDLYSWTTMI 331
Query: 407 TACA 410
A
Sbjct: 332 CGLA 335
>gi|297746423|emb|CBI16479.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 240/383 (62%), Gaps = 7/383 (1%)
Query: 126 GLDPDSFTYPILLKACGDLRQVKG---VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKS 182
GL PD+FTYP ++KACG V +HS++VK+ F+S + L+ Y N V
Sbjct: 5 GLKPDNFTYPFVVKACGRSLVVGAGGAMHSIIVKA-GFDSDRYVGNTLLRMYANLNAVGL 63
Query: 183 AQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACAN 242
A+ +F++MT ++VV+W++MI G+V + + +FR M + + N +TLVS+LSAC
Sbjct: 64 ARRVFNEMTVRDVVSWSSMIAGYVACNCQADALMVFRHMMLANEKPNSVTLVSLLSACTR 123
Query: 243 LGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
L +G+ +H ++ NCI L+ LG A+ +MY+KCG+IE+AL+VF + EKN+ +W +
Sbjct: 124 LLNIGVGESIHSYIIVNCIGLDVALGTAILEMYSKCGHIEKALKVFNSLTEKNLQSWTIM 183
Query: 303 IGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
I GLA H GE+A+ +F QM+ +G++PD ++ +L+ACSH GL+++G+ F M + Y
Sbjct: 184 ISGLADHSHGEDAISLFTQMEQTGLQPDSMSFSEILSACSHLGLVDEGQTFFSQMVKIYN 243
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAE 422
+ P ++HYGC+VD+ RA +++EAYE+I+NMPMEPN+V+ S + AC +DG E
Sbjct: 244 IRPTMEHYGCMVDMFARAGMIEEAYEIIKNMPMEPNSVILRSFIGAC--RNDGRVFGFDE 301
Query: 423 IAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVV 482
L+++EP NYVL S + + W++A +R MKE+ + K PG S +E++ +
Sbjct: 302 NLRRLLLEIEPDLGANYVLASGVSSLSGCWNEAADLRVSMKEKGLKKVPGWSRVEVSGIA 361
Query: 483 HEFMVGDGRHPCSEEIYSMLEYV 505
F GR + YSM +Y+
Sbjct: 362 TMFTRAGGRLN-TLATYSMEQYM 383
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 133/266 (50%), Gaps = 19/266 (7%)
Query: 49 VHAQIIKASFD-NRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYA 107
+H+ I+KA FD +R + +T L+ N + + A VFN++ +++++I GY
Sbjct: 32 MHSIIVKAGFDSDRYVGNT----LLRMYANLNAVGLARRVFNEMTVRDVVSWSSMIAGYV 87
Query: 108 EAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KGVHS-LVVKSKDFNSV 163
+ ++ M+ P+S T LL AC L + + +HS ++V +
Sbjct: 88 ACNCQADALMVFRHMMLANEKPNSVTLVSLLSACTRLLNIGVGESIHSYIIVNCIGLDVA 147
Query: 164 IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD 223
+ T ++ Y G ++ A +F+ +TEKN+ +WT MI+G + + I LF +M
Sbjct: 148 LG--TAILEMYSKCGHIEKALKVFNSLTEKNLQSWTIMISGLADHSHGEDAISLFTQMEQ 205
Query: 224 SGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG----AALTDMYAKCG 279
+G++ + ++ +LSAC++LG + G+ F ++ I N + + DM+A+ G
Sbjct: 206 TGLQPDSMSFSEILSACSHLGLVDEGQ---TFFSQMVKIYNIRPTMEHYGCMVDMFARAG 262
Query: 280 YIEEALRVFK-IVLEKNVCTWNSIIG 304
IEEA + K + +E N S IG
Sbjct: 263 MIEEAYEIIKNMPMEPNSVILRSFIG 288
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%)
Query: 221 MRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGY 280
M+ G++ + T V+ AC G +H + K + +G L MYA
Sbjct: 1 MQRVGLKPDNFTYPFVVKACGRSLVVGAGGAMHSIIVKAGFDSDRYVGNTLLRMYANLNA 60
Query: 281 IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTA 340
+ A RVF + ++V +W+S+I G C +A+ +F M ++ KP+ VTL+++L+A
Sbjct: 61 VGLARRVFNEMTVRDVVSWSSMIAGYVACNCQADALMVFRHMMLANEKPNSVTLVSLLSA 120
Query: 341 CSHAGLIEKGKEI 353
C+ I G+ I
Sbjct: 121 CTRLLNIGVGESI 133
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 94/242 (38%), Gaps = 25/242 (10%)
Query: 18 ANSHKNSNTATKSHHHLPLLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAK-LIE 73
AN NS T + LL CT L+ + +H+ II N D L ++E
Sbjct: 105 ANEKPNSVTL------VSLLSACTRLLNIGVGESIHSYIIV----NCIGLDVALGTAILE 154
Query: 74 SLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFT 133
I A VFN + + ++ +I G A+ G I L+TQM GL PDS +
Sbjct: 155 MYSKCGHIEKALKVFNSLTEKNLQSWTIMISGLADHSHGEDAISLFTQMEQTGLQPDSMS 214
Query: 134 YPILLKACGDLRQV---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
+ +L AC L V + S +VK + + ++ + G ++ A + M
Sbjct: 215 FSEILSACSHLGLVDEGQTFFSQMVKIYNIRPTMEHYGCMVDMFARAGMIEEAYEIIKNM 274
Query: 191 T-EKNVVTWTAMINGHVKQKNYREGID------LFRKMRDSGVEVNELTLVSVLSACANL 243
E N V + I G + G D L D G + VS LS C N
Sbjct: 275 PMEPNSVILRSFI-GACRNDGRVFGFDENLRRLLLEIEPDLGANYVLASGVSSLSGCWNE 333
Query: 244 GA 245
A
Sbjct: 334 AA 335
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 163/466 (34%), Positives = 267/466 (57%), Gaps = 30/466 (6%)
Query: 22 KNSNTATKSHHHLPLLQKCTHLVQFKQ---VHAQIIKASFDNRTISDTQLAKLIESLVNS 78
K S+ + L++ C+ + K+ H ++ + LI+
Sbjct: 115 KRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFV---MTSLIDLYGKC 171
Query: 79 SQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILL 138
+I A VF+++ + ++ +I GYA +L+ +M + ++ ++ ++
Sbjct: 172 GEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMP----EKNAVSWNAII 227
Query: 139 KA---CGDLRQVKGVHSLVVKSKDFNSVIH----SLTRLITFYCNFGDVKSAQLLFDQMT 191
CGDLR + K F+ + H S T +I Y GD+ SA+ +F++
Sbjct: 228 SGYVKCGDLRSAR---------KMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAP 278
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
E++VV W+A+I+G+V+ E + +F +M V+ +E +VS++SAC+ +G+ EL KW
Sbjct: 279 ERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAKW 338
Query: 252 VHEFVNKNCI-ILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG 310
V ++V K+ I + + AAL DM AKCG ++ A ++F+ + ++++ ++ S++ GL+IHG
Sbjct: 339 VDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHG 398
Query: 311 CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY 370
CG +AV +F +M G+ PDDV +LTACS AGL+++G F +M+ DY + P+ HY
Sbjct: 399 CGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHY 458
Query: 371 GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIK 430
C+VDLL RA L EAYE++++MP+EP+A WG+LL AC D +EL E+ ++L +
Sbjct: 459 ACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCD---IELGEVVADQLFE 515
Query: 431 LEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVI 476
LEP N GNYVL+SNIYAA QW D +R M+ER I K PGCS I
Sbjct: 516 LEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 183/363 (50%), Gaps = 17/363 (4%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LL+ CT +QVHA+II+ +Q L SL N S Y VFN + +PS
Sbjct: 31 LLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFS---YTTSVFNGVSSPS 87
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVK---GVHS 152
T +NT I+GY+E + L+ +M + PD FTYP L+KAC + VK H
Sbjct: 88 TVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHG 147
Query: 153 LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYR 212
V+ + +T LI Y G++ A+ +FD+M E+NVV+WTAMI G+ +
Sbjct: 148 SAVRC-GVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLV 206
Query: 213 EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALT 272
E LF +M + V+ ++S C +L ++ K E ++N + +
Sbjct: 207 EARKLFDEMPEKNA-VSWNAIISGYVKCGDLRSAR--KMFDEMPHRNVVSFT-----TMI 258
Query: 273 DMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDV 332
D YAK G + A VF+ E++V W+++I G +G EAVK+F +M +KPD+
Sbjct: 259 DGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEF 318
Query: 333 TLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHY-GCLVDLLCRARLLDEAYEVIR 391
++++++ACS G +E K + +R+ ++ + H L+D+ + +D A ++
Sbjct: 319 IMVSLMSACSQMGSLELAKWVDDYVRKS-SIDVHRAHVIAALIDMNAKCGSMDRATKLFE 377
Query: 392 NMP 394
MP
Sbjct: 378 EMP 380
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 167/495 (33%), Positives = 278/495 (56%), Gaps = 48/495 (9%)
Query: 43 LVQFKQVHAQIIKASFDNRTISDTQLAK-LIESLVNSSQIAYAHLVFNQIINPSTFAFNT 101
L + +QVH + K F +D ++A L++ ++ A VF++++ +NT
Sbjct: 120 LREGEQVHVHVFKNGFQ----TDERIATTLVDLYARCGRLDDARRVFDRLLVKDAQLYNT 175
Query: 102 VIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPIL-----LKACGDLRQVK-------G 149
+I Y EAG +L+ M P+ T+ ++ A GD+ K G
Sbjct: 176 MIAAYMEAGEVELAEELFEVM------PERNTHTLMEMVGGYSARGDMDSAKHVFEMANG 229
Query: 150 VHSLVVKS------------KDFNSVIHSLTR---------LITFYCNFGDVKSAQLLFD 188
V ++V+ + D SV + + + Y G V+ A+ +FD
Sbjct: 230 VVNMVLCTAMISGFAKTGSVDDARSVFDGMRQRDVATWNVMIGVMYAKCGLVEDARKVFD 289
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
M E+NVV WT+MI+G+ + +++ + LFR M+ SGV+ ++ T+ +V+S+C +GA +L
Sbjct: 290 AMPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSSCGQMGALDL 349
Query: 249 GKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAI 308
G++VH + + + + + +L DMY+KCG I++A +F+ +++++ +W +I G A+
Sbjct: 350 GRYVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRGLVKRDDFSWTVMIMGFAV 409
Query: 309 HGCGEEAVKMFWQMQMSG-IKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNV 367
+G EA+ +F QM+ G + P+++T + VLT+CSH GL+E+G F+ M + Y + P +
Sbjct: 410 NGLSGEALDLFAQMEEEGEVMPNEITFLGVLTSCSHGGLVEQGYHHFHRMSKVYGIAPRI 469
Query: 368 KHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMER 427
+HYGC+VDLL RA+LL EA + I MP+ P+ +W SLL AC + + V LAE ER
Sbjct: 470 EHYGCMVDLLGRAKLLAEAEQFIEEMPIAPDVAIWRSLLFACRARGE---VGLAEYVAER 526
Query: 428 LIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMV 487
+ +LEP G VL+SN+YA ++W D K+R M + K PGCSVIE+N HEF+
Sbjct: 527 VEELEPSRCGGNVLLSNVYATTSRWVDVNKVRTGMGRSRVSKRPGCSVIEVNGCAHEFLS 586
Query: 488 GDGRHPCSEEIYSML 502
GD H +E IY++L
Sbjct: 587 GDETHLETEAIYNIL 601
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 152/308 (49%), Gaps = 21/308 (6%)
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD---SFTYPILLKACGDLRQVK 148
+ P TF ++V++ A + G Q++ + NG D + T L CG L +
Sbjct: 100 VRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNGFQTDERIATTLVDLYARCGRLDDAR 159
Query: 149 GVHS--LVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHV 206
V LV ++ +N+ +I Y G+V+ A+ LF+ M E+N T M+ G+
Sbjct: 160 RVFDRLLVKDAQLYNT-------MIAAYMEAGEVELAEELFEVMPERNTHTLMEMVGGYS 212
Query: 207 KQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFV-NKNCIILND 265
+ + +F +GV VN + +++S A G+ + + V + + ++ N
Sbjct: 213 ARGDMDSAKHVFEMA--NGV-VNMVLCTAMISGFAKTGSVDDARSVFDGMRQRDVATWNV 269
Query: 266 KLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMS 325
+G MYAKCG +E+A +VF + E+NV W S+I G G ++AVK+F MQ+S
Sbjct: 270 MIGV----MYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQIS 325
Query: 326 GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDE 385
G+K DD T+ V+++C G ++ G+ + + + + + L+D+ + + +
Sbjct: 326 GVKADDATIATVVSSCGQMGALDLGRYV-HAYCDVHGLGKGISVKNSLIDMYSKCGDIKK 384
Query: 386 AYEVIRNM 393
A+E+ R +
Sbjct: 385 AHEIFRGL 392
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 212 REGIDLFRKMRDS--GVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
R+ + L+ +M GV T+ SVL A A G+ VH V KN ++++
Sbjct: 84 RDAVALYAQMHRGCPGVRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNGFQTDERIAT 143
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQM------- 322
L D+YA+CG +++A RVF +L K+ +N++I G E A ++F M
Sbjct: 144 TLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELFEVMPERNTHT 203
Query: 323 ---------------------QMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDY 361
+M+ + V A+++ + G ++ + +F MR
Sbjct: 204 LMEMVGGYSARGDMDSAKHVFEMANGVVNMVLCTAMISGFAKTGSVDDARSVFDGMR--- 260
Query: 362 KVEPNVKHYGCLVDLL-CRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+ +V + ++ ++ + L+++A +V MP E N V W S+++
Sbjct: 261 --QRDVATWNVMIGVMYAKCGLVEDARKVFDAMP-ERNVVCWTSMISG 305
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 157/413 (38%), Positives = 248/413 (60%), Gaps = 7/413 (1%)
Query: 105 GYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVVKSKDFN 161
GY G + ++L++ + +G D T KACG L Q K +H+ +K+ F+
Sbjct: 4 GYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG-FD 62
Query: 162 SVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM 221
S +H + ++ Y GD+ +A ++F+ ++ + V WT+MI+G V N + + ++ +M
Sbjct: 63 SDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRM 122
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYI 281
R S V +E T +++ A + + A E G+ +H V K + + +G +L DMYAKCG I
Sbjct: 123 RQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNI 182
Query: 282 EEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTAC 341
E+A R+FK + +N+ WN+++ GLA HG EEAV +F M+ GI+PD V+ I +L+AC
Sbjct: 183 EDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSAC 242
Query: 342 SHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVL 401
SHAGL + E ++M DY +EP ++HY CLVD L RA L+ EA +VI MP + +A +
Sbjct: 243 SHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASI 302
Query: 402 WGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRL 461
+LL AC D VE + RL LEPF+ YVL+SNIYAA +WDD R++
Sbjct: 303 NRALLGACRIQGD---VEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKM 359
Query: 462 MKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECY 514
MK +N+ K+PG S I++ +++H F+V D HP ++ IY +E + ++RE+ Y
Sbjct: 360 MKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGY 412
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 152/307 (49%), Gaps = 17/307 (5%)
Query: 10 QLTHFTNSANSHKNSNTATKSHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQL- 68
L H + + TA K+ L LL Q KQ+HA IKA FD SD +
Sbjct: 19 SLIHKSGEKSDQITLATAAKACGCLVLLD------QGKQIHAHAIKAGFD----SDLHVN 68
Query: 69 AKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD 128
+ +++ + + A +VFN I P A+ ++I G + G + +++Y +M + +
Sbjct: 69 SGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVM 128
Query: 129 PDSFTYPILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQL 185
PD +T+ L+KA L Q + +H+ V+K D S T L+ Y G+++ A
Sbjct: 129 PDEYTFATLIKASSCVTALEQGRQLHANVIK-LDCVSDPFVGTSLVDMYAKCGNIEDAYR 187
Query: 186 LFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLG- 244
LF +M +N+ W AM+ G + N E ++LF+ M+ G+E + ++ + +LSAC++ G
Sbjct: 188 LFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGL 247
Query: 245 ASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWN-SII 303
SE +++H N I + + L D + G ++EA +V + + K + N +++
Sbjct: 248 TSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALL 307
Query: 304 GGLAIHG 310
G I G
Sbjct: 308 GACRIQG 314
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 109/211 (51%), Gaps = 4/211 (1%)
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
M+ G++ + ++ ++LF + SG + +++TL + AC L + GK +H K
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ + + + DMY KCG + A VF + + W S+I G +G ++A++++
Sbjct: 61 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCLVDLLCR 379
+M+ S + PD+ T ++ A S +E+G+++ N ++ D +P V LVD+ +
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAK 178
Query: 380 ARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+++AY + + M + N LW ++L A
Sbjct: 179 CGNIEDAYRLFKKMNVR-NIALWNAMLVGLA 208
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 239/360 (66%), Gaps = 14/360 (3%)
Query: 153 LVVKSKDFNSVIHS----LTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQ 208
L V K F+ + H T +++ Y N+G++ A+ LF++ K+VV WTAMING+V+
Sbjct: 8 LSVARKIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAMINGYVQF 67
Query: 209 KNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLG 268
++ E + LF++M+ V+ ++ LV++L+ CA +GA E G W+H ++++ I ++ +G
Sbjct: 68 NHFDEAVALFQEMQIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKGIPVDAVVG 127
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+L +MY+KCG IE+ALR+F + EK+ TW SII GLA++G +A+++F +M+
Sbjct: 128 TSLIEMYSKCGCIEKALRIFCGLREKDTATWTSIICGLAMNGKTSKALELFSKMKQVEAI 187
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
PD+VT I VL+ACSH GL+E+G+E F +M Y +EP ++HYGCL+DLL RA LDEA E
Sbjct: 188 PDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLIDLLGRAGQLDEAEE 247
Query: 389 VIRNMPMEPNAV---LWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNI 445
+I+ + N + L+GSLL+AC NV++ E E+L+K+E + + L++NI
Sbjct: 248 LIKKIVNANNEIIVPLYGSLLSACRIYK---NVQMGERVAEQLVKIESRDSSVHTLLANI 304
Query: 446 YAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSE--EIYSMLE 503
YA+ +W D ++RR MK+ + K PGCS IE++ +VHEF+VG+ CSE EIYSML+
Sbjct: 305 YASAGRWVDVNRVRREMKDLGVKKVPGCSSIEVDGIVHEFLVGN--PSCSEMREIYSMLD 362
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 19/262 (7%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
++ VN ++ A +F + + +I GY + + L+ +M + PD
Sbjct: 29 MVSGYVNYGELDKARELFERSPVKDVVLWTAMINGYVQFNHFDEAVALFQEMQIQRVKPD 88
Query: 131 SFTYPILLKAC---GDLRQVKGVHSLV-VKSKDFNSVIHSLTRLITFYCNFGDVKSAQLL 186
F LL C G L Q +H + K ++V+ T LI Y G ++ A +
Sbjct: 89 KFVLVALLTGCAQMGALEQGTWIHGYIDEKGIPVDAVVG--TSLIEMYSKCGCIEKALRI 146
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
F + EK+ TWT++I G + ++LF KM+ +E+T + VLSAC++ G
Sbjct: 147 FCGLREKDTATWTSIICGLAMNGKTSKALELFSKMKQVEAIPDEVTFIGVLSACSHGGLV 206
Query: 247 ELGKWVHEFVNKNCIILN--DKLG--AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSI 302
E G+ EF N I N KL L D+ + G ++EA + K ++ N N I
Sbjct: 207 EEGR---EFFNSMTSIYNIEPKLEHYGCLIDLLGRAGQLDEAEELIKKIVNAN----NEI 259
Query: 303 IGGLAIHGCGEEAVKMFWQMQM 324
I + ++G A +++ +QM
Sbjct: 260 I--VPLYGSLLSACRIYKNVQM 279
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 38/195 (19%)
Query: 274 MYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHG----------------------- 310
MY KCG + A ++F + KNV W S++ G +G
Sbjct: 1 MYCKCGCLSVARKIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAM 60
Query: 311 --------CGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDY 361
+EAV +F +MQ+ +KPD L+A+LT C+ G +E+G I Y +
Sbjct: 61 INGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKGI 120
Query: 362 KVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELA 421
V+ V L+++ + +++A + + E + W S++ C A +G +
Sbjct: 121 PVDAVVGTS--LIEMYSKCGCIEKALRIFCGL-REKDTATWTSII--CGLAMNGKTSKAL 175
Query: 422 EIAMERLIKLEPFND 436
E+ ++ ++E D
Sbjct: 176 EL-FSKMKQVEAIPD 189
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/476 (35%), Positives = 267/476 (56%), Gaps = 41/476 (8%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
L+ S ++ + + F+++++ + ++N++I GYA+AG L+ +M G D
Sbjct: 153 LLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLED 212
Query: 131 SFTYPILLKAC---GDLRQVKGVH----------SLVVKSK------------------- 158
FT LL AC G+L + VH L+++S
Sbjct: 213 EFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFE 272
Query: 159 --DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID 216
SV+ S T ++ G V +A+ FD M E+N+V+W AMI+ +V++ E +D
Sbjct: 273 MMPIKSVV-SWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALD 331
Query: 217 LFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYA 276
L+ +M+ G+ +E+TLV+VLSA +G +GK VH ++ N + L +L DMYA
Sbjct: 332 LYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDMYA 391
Query: 277 KCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIA 336
KCG ++ A+ +F + +NV +WN IIGGLA+HG + + F M PD +T +A
Sbjct: 392 KCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFVA 451
Query: 337 VLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPME 396
+L+ACSH GL+E G+ F +MR Y V+ V+HY C+VDLL R L++A +I+ MPM+
Sbjct: 452 LLSACSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMK 511
Query: 397 PNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAG 456
P+ V+WG+LL AC NV++ +++L++LE + G +VL+SN+ QW+D
Sbjct: 512 PDVVVWGALLGACRIH---GNVKIGRQVIKQLLELEGISGGLFVLISNLLYETHQWEDMK 568
Query: 457 KMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSM---LEYVAISL 509
++R+LMKE K+ G S IEIN+ +HEF V D RH S EIY++ L Y ISL
Sbjct: 569 RLRKLMKEWGTRKDMGVSSIEINNSIHEFGVEDIRHERSSEIYAVVDQLSYHLISL 624
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 207/435 (47%), Gaps = 65/435 (14%)
Query: 26 TATKSHHHLPLLQK----CTHLVQFKQVHAQII-----KASFDNRTISDTQLAKLIESLV 76
T ++ HHLP LQK C + + Q+HA ++ A+ D S LAK
Sbjct: 3 TPARAGHHLPSLQKLLRQCRSIQRLNQLHAHLLVHGSLSAASDLLLASYCALAK-----A 57
Query: 77 NSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPI 136
+ +A +F+ I P +NT+IR Y + ++L+ M+ G+ P+ FT P
Sbjct: 58 GHGVLCHARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPF 117
Query: 137 LLKACGDLRQVK----GVHSLVVK----SKDF--NSVIHSLTRLITFYCNFGDVKSAQLL 186
++KAC + Q + VH + ++ + F N+++HS Y + G + ++
Sbjct: 118 VVKAC-TIAQAREHALAVHGVALRLGLVGQVFVGNALLHS-------YASAGSLGDSRRF 169
Query: 187 FDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGAS 246
FD+M ++NVV+W +MI G+ + + RE LF +MR G +E TLVS+L AC+ G
Sbjct: 170 FDEMVDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNL 229
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKI---------------- 290
E+G+ VH + + ++ L +AL DMY KCG + A R F++
Sbjct: 230 EIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQ 289
Query: 291 ---------------VLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLI 335
+ E+N+ +WN++I G EA+ ++ QMQ G+ PD++TL+
Sbjct: 290 TKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLV 349
Query: 336 AVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPM 395
AVL+A G + GK + + RD P+V L+D+ + +D A + M
Sbjct: 350 AVLSASGRIGDLTVGKMVHLYI-RDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEM-C 407
Query: 396 EPNAVLWGSLLTACA 410
N V W ++ A
Sbjct: 408 NRNVVSWNVIIGGLA 422
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 22/290 (7%)
Query: 137 LLKACGDLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNF-----GDVKSAQLLFDQMT 191
LL+ C ++++ +H+ ++ ++ + L+ YC G + A+ LFD +
Sbjct: 17 LLRQCRSIQRLNQLHAHLLVHGSLSA---ASDLLLASYCALAKAGHGVLCHARRLFDGIP 73
Query: 192 EKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKW 251
+ V + +I + RE + L R M G+ NE TL V+ AC A E
Sbjct: 74 GPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTIAQAREHALA 133
Query: 252 VHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC 311
VH + ++ +G AL YA G + ++ R F ++++NV +WNS+IGG A G
Sbjct: 134 VHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGD 193
Query: 312 GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNM-----RRDYKVEPN 366
E +F +M+ G D+ TL+++L ACS G +E G+ + M R D +E
Sbjct: 194 TREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILES- 252
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGA 416
LVD+ + L A MP++ + V W S+L CA G+
Sbjct: 253 -----ALVDMYGKCGDLWMARRCFEMMPIK-SVVSWTSML--CAQTKHGS 294
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 10/187 (5%)
Query: 59 DNRTISDTQLA-KLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQ 117
DN D L L++ Q+ A +F+++ N + ++N +I G A G I
Sbjct: 373 DNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALDTIT 432
Query: 118 LYTQMIGNGLDPDSFTYPILLKAC--GDLRQVKGVHSLVVKSKDFNSVIHSLTR---LIT 172
+ M+ + PD T+ LL AC G L + G H +N V H + ++
Sbjct: 433 FFRSMVTDSFAPDGITFVALLSACSHGGLLET-GQHYFESMRHVYN-VKHEVEHYACMVD 490
Query: 173 FYCNFGDVKSAQLLFDQMTEK-NVVTWTAMINGHVKQKNYREGIDLFRKMRD-SGVEVNE 230
G ++ A L +M K +VV W A++ N + G + +++ + G+
Sbjct: 491 LLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGRQVIKQLLELEGISGGL 550
Query: 231 LTLVSVL 237
L+S L
Sbjct: 551 FVLISNL 557
>gi|225431511|ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
gi|296088567|emb|CBI37558.3| unnamed protein product [Vitis vinifera]
Length = 492
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 261/474 (55%), Gaps = 14/474 (2%)
Query: 36 LLQKC---THLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L+KC + + Q KQ HAQI+ F T L L+ S Q A VF++++
Sbjct: 12 ILRKCVPHSAISQAKQTHAQILVHGFIPNITLQTDLL-LVYSKCGVLQDARK--VFDKMV 68
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC---GDLRQVKG 149
+ ++N +I YA + + ++ + G PD FT P + KAC GD K
Sbjct: 69 ERNMHSWNILIASYAHNCFFYDALGVFDSFLKMGFRPDHFTLPPVFKACAGIGDSYLGKM 128
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+HS V++ F + + ++ FY G + A F M+ ++ V W MI G K
Sbjct: 129 LHSWVIRI-GFEEYVVVGSSVLDFYAKCGGLVDAWRCFVNMSWRDSVVWNLMIVGLGKAC 187
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND-KLG 268
+R+ ++ FR M GV+++ T+ S+LS C G GK +H V KN I + +G
Sbjct: 188 FFRDALECFRDMLSEGVKMDSRTVPSILSVCGGEGDLMKGKEIHGQVVKNQIFGCEVAIG 247
Query: 269 AALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIK 328
+L DMYAKCG + ++ +VF + E N+ TW S+I +HG G EA+ +F +M+ G +
Sbjct: 248 NSLIDMYAKCGCLHDSEKVFTTMSELNLVTWTSMISCYGVHGKGHEALALFKKMKYCGFQ 307
Query: 329 PDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYE 388
P+ VT+ A+L +CSH+GLIE+G++IFY++ DY EP+ +HY C+VDLL R L+EA+E
Sbjct: 308 PNCVTITAILASCSHSGLIEQGRKIFYSINLDYGFEPSAEHYACMVDLLGRFGYLEEAFE 367
Query: 389 VIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAA 448
+I+NM A +WG+LL C N+E+ EIA L +LEP N NY+ + ++Y +
Sbjct: 368 LIKNMKSAATASVWGALLAGCLMHK---NIEIGEIAAHCLFELEPRNSSNYIALCSMYDS 424
Query: 449 KAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
WD + R M+E +VK PGCS I + VH+F D HP ++ IY L
Sbjct: 425 LGIWDGVSRTRAKMRELGLVKTPGCSWITVAGRVHKFYQEDLSHPETQMIYETL 478
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 12/186 (6%)
Query: 232 TLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV 291
+L +L C A K H + + I N L L +Y+KCG +++A +VF +
Sbjct: 8 SLSCILRKCVPHSAISQAKQTHAQILVHGFIPNITLQTDLLLVYSKCGVLQDARKVFDKM 67
Query: 292 LEKNVCTWNSIIGGLAIHGC-GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG 350
+E+N+ +WN +I A H C +A+ +F G +PD TL V AC+ G G
Sbjct: 68 VERNMHSWNILIASYA-HNCFFYDALGVFDSFLKMGFRPDHFTLPPVFKACAGIGDSYLG 126
Query: 351 KEIFYNMRRDYKVEPNVKHY----GCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLL 406
K M + + + Y ++D + L +A+ NM ++V+W ++
Sbjct: 127 K-----MLHSWVIRIGFEEYVVVGSSVLDFYAKCGGLVDAWRCFVNMSWR-DSVVWNLMI 180
Query: 407 TACASA 412
A
Sbjct: 181 VGLGKA 186
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 220/351 (62%), Gaps = 4/351 (1%)
Query: 159 DFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLF 218
D NSV + +I Y G V +A LFD+M E ++++WTAM+NG VK+ + E + F
Sbjct: 112 DKNSV--TWNTMIDGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWF 169
Query: 219 RKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC 278
R+M+ SGV+ + + +++ L+AC NLGA LG WVH +V N ++ +L D+Y +C
Sbjct: 170 REMQISGVKPDYVAIIAALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRC 229
Query: 279 GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVL 338
G +E A VF + ++ V +WNS+I G A +G E++ F +MQ G KP+ VT L
Sbjct: 230 GCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGAL 289
Query: 339 TACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPN 398
TACSH GL+++G F +M+RDY + P ++HYGCLVDL RA L++A +V+++MPM+PN
Sbjct: 290 TACSHVGLVDEGLRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPN 349
Query: 399 AVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKM 458
V+ GSLL AC + G N LAE M+ L L + NYV++SN+YAA A+W+ A +M
Sbjct: 350 EVVIGSLLAAC--RNHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADAKWEGASRM 407
Query: 459 RRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISL 509
RR MK + K PG S IEI+D H FM GD H + I +LE ++ L
Sbjct: 408 RRKMKGLGLKKQPGFSSIEIDDCTHVFMAGDSAHVETAYIREVLELISSDL 458
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 124/259 (47%), Gaps = 38/259 (14%)
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANL--GA 245
+Q T + +V+WT+ I + E F MR +GVE +T +++LS C + G+
Sbjct: 4 NQSTSETIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGS 63
Query: 246 SELGKWVHEFVNKNCIILNDKL-GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIG 304
LG +H + K + N + G A+ MY+K G +++A VF + +KN TWN++I
Sbjct: 64 ETLGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMID 123
Query: 305 GLAIHGCGEEAVKMF----------W---------------------QMQMSGIKPDDVT 333
G G AVK+F W +MQ+SG+KPD V
Sbjct: 124 GYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVA 183
Query: 334 LIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRN 392
+IA L AC++ G + G + Y M +D+K NV+ L+DL CR ++ A EV
Sbjct: 184 IIAALNACTNLGALSLGLWVHRYVMSQDFK--NNVRVSNSLIDLYCRCGCVEFAREVFDK 241
Query: 393 MPMEPNAVLWGSLLTACAS 411
M + V W S++ A+
Sbjct: 242 ME-KRTVVSWNSVIVGFAA 259
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 6/245 (2%)
Query: 71 LIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPD 130
+I+ + S Q+ A +F+++ P ++ ++ G+ + G + + +M +G+ PD
Sbjct: 121 MIDGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPD 180
Query: 131 SFTYPILLKACGDLRQVK---GVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLF 187
L AC +L + VH V+ S+DF + + LI YC G V+ A+ +F
Sbjct: 181 YVAIIAALNACTNLGALSLGLWVHRYVM-SQDFKNNVRVSNSLIDLYCRCGCVEFAREVF 239
Query: 188 DQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASE 247
D+M ++ VV+W ++I G N E + FRKM++ G + N +T L+AC+++G +
Sbjct: 240 DKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVD 299
Query: 248 LG-KWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFK-IVLEKNVCTWNSIIGG 305
G ++ I + L D+Y++ G +E+AL+V + + ++ N S++
Sbjct: 300 EGLRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAA 359
Query: 306 LAIHG 310
HG
Sbjct: 360 CRNHG 364
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 264/448 (58%), Gaps = 30/448 (6%)
Query: 84 AHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
A F++I +P+ + GY L + ++L+ MI + DS + ++ +A
Sbjct: 148 ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIAS----DSAS--VVDEAAA- 200
Query: 144 LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG---------------DVKSAQLLFD 188
V S V + + +H+L I F N G D++ A+ +FD
Sbjct: 201 --LVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFD 258
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRD--SGVEVNELTLVSVLSACANLGAS 246
M E++VV+W +MI + + E I L+ KM + G++ N + L +VL ACA+ GA
Sbjct: 259 TM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAI 317
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGL 306
+ GK +H V + + N +G ++ DMY+KCG +E A R F+ + EKN+ +W+++I G
Sbjct: 318 QTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGY 377
Query: 307 AIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPN 366
+HG G+EA+++F +M+ SG++P+ +T I+VL ACSHAGL+++G+ + M++++ +E
Sbjct: 378 GMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAG 437
Query: 367 VKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME 426
V+HYGC+VDLL RA LDEAY +I+ M ++P+A +WG+LL+AC NVELAE++++
Sbjct: 438 VEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHK---NVELAEMSVK 494
Query: 427 RLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFM 486
RL +L+ N G YVL+SNIYA W D ++R L+K R I K PG S E+ ++ F
Sbjct: 495 RLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFY 554
Query: 487 VGDGRHPCSEEIYSMLEYVAISLREECY 514
VGD HP EIYS LE + ++E Y
Sbjct: 555 VGDKSHPQHIEIYSYLEKLLERMQEAGY 582
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 173/368 (47%), Gaps = 34/368 (9%)
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H L ++S F S +S + L+ Y + A+ FD++ + N V TAM +G+V+
Sbjct: 115 LHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNN 174
Query: 210 NYREGIDLFRKM--RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
++LFR M DS V+E + SA A + + +H + K N +
Sbjct: 175 LVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGV 234
Query: 268 GAALTDMYAKCGY--IEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ-- 323
+ D YAK G +E A +VF +E++V +WNS+I A +G EA+ ++ +M
Sbjct: 235 VNTMLDSYAKGGSRDLEVARKVFD-TMERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNV 293
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
GIK + V L AVL AC+HAG I+ GK I + R +E NV +VD+ + +
Sbjct: 294 GGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVR-MGLEENVYVGTSIVDMYSKCGRV 352
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAME-RLIKLEPFNDGNYVLM 442
+ A R + E N + W +++T G E EI E + L P NY+
Sbjct: 353 EMASRAFRKIK-EKNILSWSAMITGYGM--HGRGQEALEIFTEMKRSGLRP----NYITF 405
Query: 443 SNIYAA--KAQWDDAGK-----MRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCS 495
++ AA A D G+ M++ V++ GC V D++ GR C
Sbjct: 406 ISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMV----DLL-------GRAGCL 454
Query: 496 EEIYSMLE 503
+E YS+++
Sbjct: 455 DEAYSLIK 462
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 36 LLQKCTH---LVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
+L C H + K++H Q+++ + T + ++ ++ A F +I
Sbjct: 307 VLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSI---VDMYSKCGRVEMASRAFRKIK 363
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKAC 141
+ +++ +I GY G G ++++T+M +GL P+ T+ +L AC
Sbjct: 364 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAAC 412
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 273/494 (55%), Gaps = 19/494 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-------KLIESLVNSSQIAYAHL 86
LPLL + L Q VHA I+A S ++L L++ + YA
Sbjct: 235 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 294
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL---DPDSFTYPILLKACGD 143
VF+ + + ++ +I G+ + L+ M+ GL P S L+AC
Sbjct: 295 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASA--LRACAS 352
Query: 144 L---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
L R + +H+L+ KS ++ + + L++ Y G + A LFD+M K+ V+++A
Sbjct: 353 LDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 411
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
+++G+V+ E +F+KM+ VE + T+VS++ AC++L A + G+ H V
Sbjct: 412 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 471
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ + AL DMYAKCG I+ + +VF ++ +++ +WN++I G IHG G+EA +F
Sbjct: 472 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 531
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M G PD VT I +L+ACSH+GL+ +GK F+ M Y + P ++HY C+VDLL R
Sbjct: 532 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 591
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
LDEAYE I++MP+ + +W +LL AC N++L + + +L P GN+V
Sbjct: 592 GFLDEAYEFIQSMPLRADVRVWVALLGACRVYK---NIDLGKKVSRMIQELGPEGTGNFV 648
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYS 500
L+SNIY+A ++D+A ++R + K + K+PGCS IEIN +H F+ GD HP S EIY
Sbjct: 649 LLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYR 708
Query: 501 MLEYVAISLREECY 514
L+ + + +++ Y
Sbjct: 709 ELDNILVGIKKLGY 722
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 185/392 (47%), Gaps = 27/392 (6%)
Query: 37 LQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L+ C+ L + +H I A T L++ V + + A +F +
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVST---ALLDMYVKCACLPDAAHIFATMPA 188
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQ--LYTQMIGNGLDPDSFTYPILLKAC---GDLRQVK 148
A+N ++ GYA G+ H + L QM + L P++ T LL G L Q
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248
Query: 149 GVHSLVV----------KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
VH+ + KSK + V+ T L+ Y G + A+ +FD M +N VTW
Sbjct: 249 SVHAYCIRACLHPNRNSKSKLTDGVLLG-TALLDMYAKCGSLLYARRVFDAMPARNEVTW 307
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGV-EVNELTLVSVLSACANLGASELGKWVHEFVN 257
+A+I G V + LF+ M G+ ++ ++ S L ACA+L +G+ +H +
Sbjct: 308 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLA 367
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
K+ + + G +L MYAK G I++A+ +F + K+ ++++++ G +G EEA
Sbjct: 368 KSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFL 427
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCLVDL 376
+F +MQ ++PD T+++++ ACSH ++ G+ + + R E ++ L+D+
Sbjct: 428 VFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI--CNALIDM 485
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+ +D + +V MP + V W +++
Sbjct: 486 YAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAG 516
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 166/351 (47%), Gaps = 21/351 (5%)
Query: 76 VNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAG--LGHRGIQLYTQMIGNGLDPDSFT 133
+ S ++ AH +F+QI +P +N +IR Y+ + G+ LY +M+ + + P+++T
Sbjct: 68 IASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYT 127
Query: 134 YPILLKACGDLRQ---VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQM 190
+P LKAC L + +H + + + + T L+ Y + A +F M
Sbjct: 128 FPFALKACSALADHHCGRAIHRHAIHA-GLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 191 TEKNVVTWTAMINGHVKQKNYREGID--LFRKMRDSGVEVNELTLVSVLSACANLGASEL 248
+++V W AM+ G+ Y + L +M+ + N TLV++L A GA
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 249 GKWVHEFVNKNCIILNDK----------LGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
G VH + + C+ N LG AL DMYAKCG + A RVF + +N T
Sbjct: 247 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIA-VLTACSHAGLIEKGKEIFYNM 357
W+++IGG + +A +F M G+ T IA L AC+ + G+++ + +
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQL-HAL 365
Query: 358 RRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
V ++ L+ + +A L+D+A + M ++ + V + +L++
Sbjct: 366 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSG 415
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 263/487 (54%), Gaps = 40/487 (8%)
Query: 65 DTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG 124
D ++ V + A VF ++ +N +I GY +G+ +L+ +M+
Sbjct: 228 DLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVL 287
Query: 125 NGLDPDSFTYPILLKAC---GDLRQVKGVHSLVVK-SKDF--NSVIHSLTRLITFYCNFG 178
+ D FT+ +L AC G K VH +++ +F + + L+TFY G
Sbjct: 288 ERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCG 347
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVK------------QKNYR-------------- 212
++ A+ +FD MT K+VV+W +++G+V+ + Y+
Sbjct: 348 NIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVH 407
Query: 213 -----EGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKL 267
+ + LF KMR V+ + T ++AC LGA + GK +H + + ++
Sbjct: 408 GGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSA 467
Query: 268 GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGI 327
G AL MYA+CG ++EA +F ++ + +WN++I L HG G EA+++F +M GI
Sbjct: 468 GNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGI 527
Query: 328 KPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAY 387
PD ++ + VLTAC+H+GL+++G F +M+RD+ + P HY L+DLL RA + EA
Sbjct: 528 YPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEAR 587
Query: 388 EVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYA 447
++I+ MP EP +W ++L+ C ++ D +EL A ++L K+ P +DG Y+L+SN Y+
Sbjct: 588 DLIKTMPFEPTPSIWEAILSGCRTSGD---MELGAHAADQLFKMTPQHDGTYILLSNTYS 644
Query: 448 AKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAI 507
A W DA ++R+LM++R + K PGCS IE + VH F+VGD +HP + E+Y LE V
Sbjct: 645 AAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGA 704
Query: 508 SLREECY 514
+R+ Y
Sbjct: 705 KMRKLGY 711
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 174/413 (42%), Gaps = 87/413 (21%)
Query: 84 AHLVFNQIINPS---TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNG-LDPDSFTYPILLK 139
A + F + P+ T N VI YA A + ++ ++ +G L PD +++ LL
Sbjct: 106 AAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLS 165
Query: 140 ACGDL-----RQVKGVHSLVVKSKDFN--SVIHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
A G L R +H V+KS SV ++L L + + A+ + D+M
Sbjct: 166 AGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPN 225
Query: 193 KNVVTWTAMINGHVKQKNYR-------------------------------EGIDLFRKM 221
K+ +TWT M+ G+V++ + E +LFR+M
Sbjct: 226 KDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRM 285
Query: 222 RDSGVEVNELTLVSVLSACANLGASELGKWVH--------EFVNKNCIILNDKLGAALTD 273
V ++E T SVLSACAN+G GK VH FV + + +N+ AL
Sbjct: 286 VLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNN----ALVT 341
Query: 274 MYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGC---------------------- 311
Y+KCG I A R+F + K+V +WN+I+ G C
Sbjct: 342 FYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVM 401
Query: 312 ---------GEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYK 362
E+A+K+F +M+ +KP D T + AC G ++ GK++ ++ +
Sbjct: 402 VSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQ-LG 460
Query: 363 VEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDG 415
E + L+ + R + EA+ + MP ++V W ++++A G
Sbjct: 461 FEGSNSAGNALITMYARCGAVKEAHLMFLVMP-NIDSVSWNAMISALGQHGHG 512
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/517 (33%), Positives = 273/517 (52%), Gaps = 46/517 (8%)
Query: 30 SHHHLPLLQKCTHLVQFKQVHAQIIKASFDNRTI--SDTQLAKLIESLV-------NSSQ 80
SH L+++C + Q QVHAQ + T S L K++ +L + S
Sbjct: 27 SHSIYTLIRQCKTINQLYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKSSFSL 86
Query: 81 IAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKA 140
+ YA F+ I NPSTF +N +IR + + + QM + PD +YP LKA
Sbjct: 87 LHYAVSTFDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFALKA 146
Query: 141 CGDLRQV---KGVHSLVVK---SKDF---NSVIH------------------------SL 167
C LR + + +HS V K D NS+IH S
Sbjct: 147 CAHLRVLSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVVSY 206
Query: 168 TRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVE 227
L+ + G+ A+ +FD M ++ V+W ++I G+ + E I LF M +E
Sbjct: 207 NALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGLKLE 266
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+ + LVS LSACA LG E GK +H+++ KN I + L L D YAK G I+ A++V
Sbjct: 267 PDNIALVSALSACAQLGELEKGKQIHDYIKKNRIQADSFLSTGLVDFYAKSGCIDTAIKV 326
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
F++ +K++ TWN+++ G+A+HG + F +M +GIKPD ++ + VL CSH GL+
Sbjct: 327 FELSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVLVGCSHGGLV 386
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
++ K++F M Y V +KHYGC+ DLL RA L+ EA E+ + +PM + +W LL
Sbjct: 387 DEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPMGGDIFVWSGLLG 446
Query: 408 ACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKE-RN 466
C N+E+AE A +++++L+P + G Y +++N+YA +W+D K+RR M R
Sbjct: 447 GCRIH---GNIEIAEQAAKQVMELKPEDGGVYSILANVYANADRWEDVVKIRRSMSSNRA 503
Query: 467 IVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
+ KN G S I++ + HEF+ G+ H S EIY +L+
Sbjct: 504 VKKNAGRSSIQLGGLTHEFLAGESLHAQSSEIYMVLD 540
>gi|357164322|ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Brachypodium distachyon]
Length = 593
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 264/460 (57%), Gaps = 15/460 (3%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
+QVHA K F R L L + A VF+++ + ++ ++ +
Sbjct: 133 RQVHAVAEKGGFLGRLPVRNALVTLYGV---CGECGDARRVFDEMASRDVVSWTALVSAF 189
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSLVVKSK-DFNS 162
G + L QM + P+ T +L ACG L R K VH ++ + D
Sbjct: 190 VRGGRFAEALVLVGQM---DVVPNEGTLACVLVACGRLGAARAGKAVHGWYLRRESDLKL 246
Query: 163 VIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR 222
++ + ++ Y + A+ +FD++ ++V++WT MI+G V+ K + +++F +M+
Sbjct: 247 IVGNA--VLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQ 304
Query: 223 DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
S V+ +++ L +VLSAC +LGA E G+WVHE++ + I + +G +L DMYAKCG +E
Sbjct: 305 KSRVKPDKVVLSTVLSACTSLGALESGRWVHEYIERKGIEWDVHVGTSLVDMYAKCGCLE 364
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
+L +F+ + KN+ +WN++I G A+HG G EA++ F +M SG+ P++V+ I VL AC
Sbjct: 365 TSLSIFRKMPLKNLSSWNALINGFALHGHGREALEHFDRMVASGLAPNEVSFIIVLGACC 424
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLW 402
H+GL+++G ++F +M+ YK+ P +HYG +VDLL RA L+ EAY V + MPM P W
Sbjct: 425 HSGLVQEGLQLFESMKNSYKLSPWEEHYGSVVDLLGRAGLIHEAYSVTKAMPMRPAVFTW 484
Query: 403 GSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLM 462
G+LL+AC + V+ ++ + + +LE G Y L+SNIYA +W D ++R LM
Sbjct: 485 GALLSACQAHR---QVDFSQQILRHVHELESSESGVYALLSNIYAVNHRWADVKRVRGLM 541
Query: 463 KERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSML 502
E+ + K PG SVIE+N EF+VG H +EI +ML
Sbjct: 542 SEKGLQKEPGSSVIEVNGKTSEFVVGQKNHKNVDEICAML 581
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 165/332 (49%), Gaps = 19/332 (5%)
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLD----PDSFTYPILLKACG----- 142
+ S FN +I +G + + ++ G PD +T P LKAC
Sbjct: 64 LRASAHPFNALISHLTLSGEPSSAFRTFAALLAAGRGEPRRPDGYTLPATLKACARLGAG 123
Query: 143 ----DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
LR+ + VH+ V + F + L+T Y G+ A+ +FD+M ++VV+W
Sbjct: 124 GDDGGLREGRQVHA-VAEKGGFLGRLPVRNALVTLYGVCGECGDARRVFDEMASRDVVSW 182
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNK 258
TA+++ V+ + E + L +M V NE TL VL AC LGA+ GK VH + +
Sbjct: 183 TALVSAFVRGGRFAEALVLVGQM---DVVPNEGTLACVLVACGRLGAARAGKAVHGWYLR 239
Query: 259 NCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKM 318
L +G A+ DMY KC ++ A RVF +L ++V +W +I GL +A+++
Sbjct: 240 RESDLKLIVGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCKLPSKALEV 299
Query: 319 FWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLC 378
F +MQ S +KPD V L VL+AC+ G +E G+ + + R +E +V LVD+
Sbjct: 300 FNEMQKSRVKPDKVVLSTVLSACTSLGALESGRWVHEYIERK-GIEWDVHVGTSLVDMYA 358
Query: 379 RARLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ L+ + + R MP++ N W +L+ A
Sbjct: 359 KCGCLETSLSIFRKMPLK-NLSSWNALINGFA 389
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 266/456 (58%), Gaps = 12/456 (2%)
Query: 52 QIIKASFDNRTISDT-QLAKLIESLVNSSQIAYAHLVFNQII--NPSTFAFNTVIRGYAE 108
+ + FD I D+ +I+ V S I A +F+ + + + ++N+++ G+A+
Sbjct: 177 EFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQ 236
Query: 109 AGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSLT 168
GI L ++ + D ++ ++ +++ HSL + + + S +
Sbjct: 237 T---KDGIGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVI--SWS 291
Query: 169 RLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-RDSGVE 227
+I Y GD+K A+ LFD+M +K+VV + ++ G+ + Y E +++F +M R S +
Sbjct: 292 NMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLS 351
Query: 228 VNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRV 287
+E TLV LSA + LG E +H + +N I + K+ AL DMY+KCG IE A+ +
Sbjct: 352 PDETTLVVALSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILI 411
Query: 288 FKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLI 347
F V +K + WN++I G+A +G G+ A M +M +KPD +T I VL AC+HAGL+
Sbjct: 412 FDGVDQKGIDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLV 471
Query: 348 EKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLT 407
++G F MR+ +K+EP ++HYGC+VD+L +A L++ A + I MP+EPN ++W +LL+
Sbjct: 472 KEGLICFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLS 531
Query: 408 ACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNI 467
AC + + N + E+ + L+ ++ N +YVL+SNIYA W A K+R +MK++N+
Sbjct: 532 ACQNHE---NFTIGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNL 588
Query: 468 VKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYSMLE 503
K PGCS IE+ VVHEF+V D HP EIYS+L+
Sbjct: 589 TKVPGCSWIELEGVVHEFLVRDKSHPYVSEIYSVLD 624
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 208/478 (43%), Gaps = 84/478 (17%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVF----- 88
L LL+ C QVHA+IIK + + T++ S + + +A VF
Sbjct: 18 LLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYVFFTRYA 77
Query: 89 -----NQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD 143
++ F +N VI+ Y+ R + L+ M+ NG D F++ ++LKAC
Sbjct: 78 VQRIRRNHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACAR 137
Query: 144 ---LRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
+ + K +H L++K + S + L LI Y GD++ A+ +FD+M ++ V++ +
Sbjct: 138 VCLVEEGKQIHGLLMK-LEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNS 196
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELG-----KWVHEF 255
MI+G+VK IDL R++ DS + + + L+S S ++ G + +
Sbjct: 197 MIDGYVKSGT----IDLARELFDS-MPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKM 251
Query: 256 VNKNCIILNDKLG--------------------------AALTDMYAKCGYIEEALRVFK 289
++ + N +G + + D YAK G I+ A +F
Sbjct: 252 PERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFD 311
Query: 290 IVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ-MSGIKPDDVTLIAVLTACSHAGLIE 348
+ +K+V +N+I+ G A +G EA+++F +MQ S + PD+ TL+ L+A S G +E
Sbjct: 312 EMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVE 371
Query: 349 KGKEIF-YNMRRDYKV-----------------------------EPNVKHYGCLVDLLC 378
K + Y + V + + H+ ++ +
Sbjct: 372 KAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMA 431
Query: 379 RARLLDEAYEVIRNM---PMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEP 433
R L A+ ++ M ++P+ + + +L ACA A + M ++ KLEP
Sbjct: 432 RNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEP 489
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 140/340 (41%), Gaps = 38/340 (11%)
Query: 129 PDSFTYPILLKACGDLRQVKGVHSLVVKSKDF-----------NSVIHSLTRLITF--YC 175
P + +LL+ C V VH+ ++K+ NS+ L+ F Y
Sbjct: 12 PSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYV 71
Query: 176 NFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
F + Q + + + W A+I + + LF M ++G V++ +
Sbjct: 72 FFTRY-AVQRIRRNHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSL 130
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
+L ACA + E GK +H + K I N L L MY +CG IE A +VF + ++
Sbjct: 131 ILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQD 190
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKG----K 351
++NS+I G G + A ++F M + +D LI+ + + G
Sbjct: 191 SVSYNSMIDGYVKSGTIDLARELFDSMPL-----EDKNLISWNSMLGGFAQTKDGIGLAL 245
Query: 352 EIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACAS 411
E+F M E ++ + ++ + ++ A+ + MP + + + W +++ A
Sbjct: 246 ELFEKMP-----ERDLVSWNTIIGGFAKCGRIEFAHSLFNRMP-KRDVISWSNMIDGYA- 298
Query: 412 ADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQ 451
+L +I + R + + D + V + I A AQ
Sbjct: 299 -------KLGDIKVARTL-FDEMPDKDVVAFNTIMAGYAQ 330
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 264/469 (56%), Gaps = 12/469 (2%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASF-DNRTISDTQLAKLIESLVNSSQIAYAHLVFNQII 92
LP+ + + L K++H + N +++ I + + + VF+ +
Sbjct: 314 LPVCLERSELQSLKELHGYSWRHGLQSNELVANA----FIAAYTRCGALCSSERVFDLMD 369
Query: 93 NPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV---KG 149
+ ++N ++ GYA+ + + LY QM +GLDPD FT LL AC ++ + +
Sbjct: 370 TKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEE 429
Query: 150 VHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQK 209
+H +++ ++ L++ Y G +AQ+LFD M +++V+W MI G+ +
Sbjct: 430 IHGFALRNGLAVDPFIGIS-LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNG 488
Query: 210 NYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGA 269
E I+LFR+M G++ E+ ++ V AC+ L A LGK +H F K + + + +
Sbjct: 489 LPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSS 548
Query: 270 ALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKP 329
++ DMYAK G I + R+F + EK+V +WN II G IHG G+EA+++F +M G+KP
Sbjct: 549 SIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKP 608
Query: 330 DDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV 389
DD T +L ACSHAGL+E G E F M + +EP ++HY C+VD+L RA +D+A +
Sbjct: 609 DDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRL 668
Query: 390 IRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAK 449
I MP +P++ +W SLL++C N+ L E +L++LEP NYVL+SN++A
Sbjct: 669 IEEMPGDPDSRIWSSLLSSCRIH---GNLGLGEKVANKLLELEPEKPENYVLISNLFAGS 725
Query: 450 AQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
+WDD ++R MK+ + K+ GCS IE+ VH F++GD P EE+
Sbjct: 726 GKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEV 774
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 151/289 (52%), Gaps = 16/289 (5%)
Query: 136 ILLKACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTE 192
+LL+ACG D+ + +H +V S F + TR+IT Y G ++++FD++
Sbjct: 3 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62
Query: 193 KNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNE-----LTLVSVLSACANLGASE 247
KN+ W A+++ + + + + + + +F ++ + V E TL V+ ACA L
Sbjct: 63 KNLFQWNAIVSAYTRNELFEDAMSIFSEL----ISVTEHKPDNFTLPCVIKACAGLLDLG 118
Query: 248 LGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLA 307
LG+ +H K ++ + +G AL MY KCG +EEA++VF+ + E+N+ +WNSII G +
Sbjct: 119 LGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFS 178
Query: 308 IHGCGEEAVKMFWQMQMS--GIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEP 365
+G +E+ F +M + PD TL+ VL C+ IEKG + + + +
Sbjct: 179 ENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAV-HGLAVKLGLNE 237
Query: 366 NVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD 414
+ L+D+ + R L EA +++ + + N V W S++ A +D
Sbjct: 238 ELMVNNSLIDMYSKCRFLSEA-QLLFDKNDKKNIVSWNSMIGGYAREED 285
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 145/287 (50%), Gaps = 9/287 (3%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMI--GNGLDPDSFTYPILLKACG-- 142
VF + + ++N++I G++E G + +M+ PD T +L C
Sbjct: 158 VFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGE 217
Query: 143 -DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAM 201
D+ + VH L VK N + LI Y + AQLLFD+ +KN+V+W +M
Sbjct: 218 EDIEKGMAVHGLAVK-LGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSM 276
Query: 202 INGHVKQKNYREGIDLFRKMR--DSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKN 259
I G+ ++++ L +KM+ D+ ++ +E T+++VL C + K +H + ++
Sbjct: 277 IGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRH 336
Query: 260 CIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMF 319
+ N+ + A Y +CG + + RVF ++ K V +WN+++ G A + +A+ ++
Sbjct: 337 GLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLY 396
Query: 320 WQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIF-YNMRRDYKVEP 365
QM SG+ PD T+ ++L ACS + G+EI + +R V+P
Sbjct: 397 LQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDP 443
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 166/335 (49%), Gaps = 26/335 (7%)
Query: 36 LLQKCTHL--VQFKQVHAQIIKAS--FDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQI 91
LLQ C ++ + +++ AS F N + +T++ + + S + +VF+++
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSD---SRMVFDKL 60
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILLKACG---DLRQV 147
+ F +N ++ Y L + +++++I PD+FT P ++KAC DL
Sbjct: 61 RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 120
Query: 148 KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVK 207
+ +H + K D S + LI Y G V+ A +F+ M E+N+V+W ++I G +
Sbjct: 121 QIIHGMATK-MDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSE 179
Query: 208 QKNYREGIDLFRKM--RDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILND 265
+E + FR+M + + TLV+VL CA E G VH K + LN+
Sbjct: 180 NGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVK--LGLNE 237
Query: 266 KL--GAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+L +L DMY+KC ++ EA +F +KN+ +WNS+IGG A E+ + F+ +Q
Sbjct: 238 ELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYARE---EDVCRTFYLLQ 294
Query: 324 M-----SGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
+ +K D+ T++ VL C ++ KE+
Sbjct: 295 KMQTEDAKMKADEFTILNVLPVCLERSELQSLKEL 329
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/452 (36%), Positives = 252/452 (55%), Gaps = 45/452 (9%)
Query: 98 AFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDL---RQVKGVHSL- 153
++N +I G+ + + + L+ ++ G++PDSFT +L D+ RQ K +HS+
Sbjct: 373 SWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIA 432
Query: 154 VVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGH-------- 205
+VK NS + L+ YC D+ +AQ+ FD+++E++ TW A+I+G+
Sbjct: 433 IVKGLQSNSFVGG--ALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGK 490
Query: 206 ---------------------------VKQKNYREGIDLFRKMRDSGVEVNELTLVSVLS 238
V+ K Y + LF +M+ S + + T+ +L+
Sbjct: 491 IRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILA 550
Query: 239 ACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCT 298
AC+ L GK VH + + + +GA L DMYAKCG I+ +V+ + N+
Sbjct: 551 ACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVC 610
Query: 299 WNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMR 358
N+++ A+HG GEE + +F +M S ++PD VT ++VL++C HAG I+ G E FY M
Sbjct: 611 HNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLME 670
Query: 359 RDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANV 418
Y + P +KHY C+VDLL RA LDEAY++I+NMPME ++V W +LL C + V
Sbjct: 671 T-YNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKE---V 726
Query: 419 ELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEI 478
L EIA E+LI+LEP N GNYVL++N+YA+ +W D K R LM ++ + K+PGCS IE
Sbjct: 727 ALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIED 786
Query: 479 NDVVHEFMVGDGRHPCSEEIYSMLEYVAISLR 510
D VH F+ D H EEIY ML+ + +R
Sbjct: 787 RDGVHIFLASDKSHQRVEEIYFMLDNLTKFIR 818
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 204/463 (44%), Gaps = 82/463 (17%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
+LQ L KQ+H+ IK F N T+L ++ +NSS H+ F+++ +
Sbjct: 40 ILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYS--INSSFEDAWHM-FDKMTLKN 96
Query: 96 TFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDP--DSFTYPILLKAC---GDLRQVKGV 150
++ V+R + GL ++G L+ + + +GL D F +P++L C GDL + V
Sbjct: 97 LHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQV 156
Query: 151 HSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEK----------------- 193
H +V+K F + ++ LI Y G + A+ + + MT+K
Sbjct: 157 HGMVLK-HGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGV 215
Query: 194 ------------------NVVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVS 235
NVVTW+A+I G E ++LF +M +GV + TL S
Sbjct: 216 VYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLAS 275
Query: 236 VLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKN 295
VL AC+ + +GK +H ++ ++ + N + AL MY +CG ++ A ++F K
Sbjct: 276 VLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKC 335
Query: 296 VCTWNSIIGGLAIHGCGEEAVKMFWQMQ-------------------------------- 323
++N++I G +G +A ++F+QM+
Sbjct: 336 AASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFR 395
Query: 324 ---MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
M GI+PD TL ++LT + I +GKEI +++ ++ N G LV++ C+
Sbjct: 396 DLLMEGIEPDSFTLGSILTGFADMTCIRQGKEI-HSIAIVKGLQSNSFVGGALVEMYCKC 454
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADD-GANVELAE 422
+ A + E + W +L++ A + G EL E
Sbjct: 455 NDIIAAQMAFDEIS-ERDTSTWNALISGYARCNQIGKIRELVE 496
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 129/262 (49%), Gaps = 42/262 (16%)
Query: 131 SFTYPILLKACGDLRQVKGVHSLVVKSKDFNSVIHSL--TRLITFYCNFGDVKSAQLLFD 188
S TY +L++ L K +HS +K+ +N H+ T+L+ Y + A +FD
Sbjct: 34 STTYSTILQSSNSLTLGKQLHSHSIKTGFYN---HNFVQTKLLQMYSINSSFEDAWHMFD 90
Query: 189 QMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSGV--EVNELTLVSVLSACANLGAS 246
+MT KN+ +WTA++ H+ + +G LF + G+ +++ VL+ C LG
Sbjct: 91 KMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDL 150
Query: 247 ELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV--------------- 291
ELG+ VH V K+ + N +G AL DMY KCG ++EA +V + +
Sbjct: 151 ELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITAC 210
Query: 292 --------------------LEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDD 331
LE NV TW+++IGG + + E+V++F +M +G+ PD
Sbjct: 211 VANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDA 270
Query: 332 VTLIAVLTACSHAGLIEKGKEI 353
TL +VL ACS + GKE+
Sbjct: 271 RTLASVLPACSRMKWLFVGKEL 292
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 11/176 (6%)
Query: 36 LLQKCTHLVQF---KQVHAQIIKASFDNRTISDTQL-AKLIESLVNSSQIAYAHLVFNQI 91
+L C+ L KQVHA I+A +D SD + A L++ I + + V+N+I
Sbjct: 548 ILAACSKLATIHRGKQVHAYSIRAGYD----SDAHIGATLVDMYAKCGSIKHCYQVYNKI 603
Query: 92 INPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQVKGVH 151
NP+ N ++ YA G G GI ++ +M+ + + PD T+ +L +C +K +
Sbjct: 604 SNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGY 663
Query: 152 S--LVVKSKDFNSVIHSLTRLITFYCNFGDVKSA-QLLFDQMTEKNVVTWTAMING 204
++++ + + T ++ G + A QL+ + E + VTW+A++ G
Sbjct: 664 ECFYLMETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGG 719
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 265/498 (53%), Gaps = 41/498 (8%)
Query: 55 KASFDNRTISD-TQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGH 113
K FD + D + +I + Q+ A F Q+ +N++I GY + G
Sbjct: 201 KVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDL 260
Query: 114 RGIQLYTQMIGNG-LDPDSFTYPILLKACGDLRQV---KGVHSLVVKSK-DFNSV----- 163
R + ++++M+ + L PD FT +L AC +L ++ + +HS +V + D + +
Sbjct: 261 RALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNAL 320
Query: 164 --------------------------IHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVT 197
I T L+ Y GD+ A+ +FD + +++VV
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVA 380
Query: 198 WTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVN 257
WTAMI G+ + Y E I+LFR M N TL ++LS ++L + GK +H
Sbjct: 381 WTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAV 440
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIV-LEKNVCTWNSIIGGLAIHGCGEEAV 316
K+ I + + AL MYAK G I A R F ++ E++ +W S+I LA HG EEA+
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 317 KMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDL 376
++F M M G++PD +T + V +AC+HAGL+ +G++ F M+ K+ P + HY C+VDL
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 560
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFND 436
RA LL EA E I MP+EP+ V WGSLL+AC N++L ++A ERL+ LEP N
Sbjct: 561 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYK---NIDLGKVAAERLLLLEPENS 617
Query: 437 GNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSE 496
G Y ++N+Y+A +W++A K+R+ MK+ + K G S IE+ VH F V DG HP
Sbjct: 618 GAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKN 677
Query: 497 EIYSMLEYVAISLREECY 514
EIY ++ + +++ Y
Sbjct: 678 EIYITMKKIWDEIKKMGY 695
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 169/390 (43%), Gaps = 68/390 (17%)
Query: 88 FNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQV 147
F+++ + ++ T+I GY G H+ I++ +M+ G++P FT +L + R +
Sbjct: 103 FDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCL 162
Query: 148 ---KGVHSLVVKSKDFNSV------------------------------IHSLTRLITFY 174
K VHS +VK +V I S +I +
Sbjct: 163 ETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALH 222
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKM-RDSGVEVNELTL 233
G + A F+QM E+++VTW +MI+G+ ++ +D+F KM RDS + + TL
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTL 282
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALR------- 286
SVLSACANL +G+ +H + ++ + AL MY++CG +E A R
Sbjct: 283 ASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGT 342
Query: 287 --------------------------VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+F + +++V W ++I G HG EA+ +F
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFR 402
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
M +P+ TL A+L+ S + GK+I + + ++ +V L+ + +A
Sbjct: 403 SMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIY-SVSVSNALITMYAKA 461
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACA 410
+ A + E + V W S++ A A
Sbjct: 462 GSITSASRAFDLIRCERDTVSWTSMIIALA 491
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 32/220 (14%)
Query: 166 SLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMRDSG 225
S +++ Y GD+ S+ FD++ +++ V+WT MI G+ Y + I + +M G
Sbjct: 82 SWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREG 141
Query: 226 VEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKC------- 278
+E ++ TL +VL++ A E GK VH F+ K + N + +L +MYAKC
Sbjct: 142 IEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 279 ------------------------GYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
G ++ A+ F+ + E+++ TWNS+I G G
Sbjct: 202 VVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLR 261
Query: 315 AVKMFWQM-QMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
A+ MF +M + S + PD TL +VL+AC++ + G++I
Sbjct: 262 ALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQI 301
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 22/249 (8%)
Query: 231 LTLVSVLSACANLGASELGK--------WVHEFVNKNCIILNDKLGAALTDMYAKCGYIE 282
L+L ++L C NL + K VH V K+ ++ + L L ++Y+K GY
Sbjct: 7 LSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYAL 66
Query: 283 EALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACS 342
A ++F + + +WN+++ A G + + + F ++ + D V+ ++
Sbjct: 67 HARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLP----QRDSVSWTTMIVGYK 122
Query: 343 HAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEV---IRNMPMEPNA 399
+ G K I M R+ +EP+ ++ + R L+ +V I + + N
Sbjct: 123 NIGQYHKAIRIMGEMMRE-GIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNV 181
Query: 400 VLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMSNIYAAKAQWDDAGKMR 459
+ SLL A D +A++ +R++ + ++ M ++ Q D A
Sbjct: 182 SVSNSLLNMYAKCGDPM---MAKVVFDRMVVKDI---SSWNAMIALHMQVGQMDLAMAQF 235
Query: 460 RLMKERNIV 468
M ER+IV
Sbjct: 236 EQMAERDIV 244
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/524 (34%), Positives = 285/524 (54%), Gaps = 51/524 (9%)
Query: 36 LLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPS 95
LL + L +Q+HAQ++ + + + A LI + + A ++F+ +PS
Sbjct: 80 LLNQRPKLSPLQQIHAQVVTQALSSNA---SLTASLIHCYLCAKNHPNARILFDHYPSPS 136
Query: 96 TFA--FNTVIRGYAEAGLGHRGIQLYTQMIGNGLD------PDSFTYPILLKACG-DLRQ 146
+N +IR Y++ I L+ +M+ LD PD +T+ ++ +C +
Sbjct: 137 PPIKLWNVMIRTYSKIRNSQEPIHLFLRMLT--LDGPMQVVPDEYTFTFVITSCSHQISL 194
Query: 147 VKG--VHSLVVKS--------------------------KDFNSV----IHSLTRLITFY 174
+ G VH +VVKS K FN + + S T L+ Y
Sbjct: 195 IYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGY 254
Query: 175 CNFGDVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGIDLFRKMR-DSGVEVNELTL 233
G++ A LF+ M +N V+W MI+G + Y E + F M D V NE L
Sbjct: 255 AKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVL 314
Query: 234 VSVLSACANLGASELGKWVHEFVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLE 293
V VLSACA+LGA + G W+H +++K I + + AL DMYAKCG I+ A RVF + +
Sbjct: 315 VCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICK 374
Query: 294 KNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
++V ++ S+I GL+ HG G++A+++F+QM + P+++T++ VL CSH+GL+E+G I
Sbjct: 375 RDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSI 434
Query: 354 FYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASAD 413
NM + + P ++HYGC +DLL RA L+ A EV++ MPMEP+ V+W +LL+A +
Sbjct: 435 LANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSA---SR 491
Query: 414 DGANVELAEIAMERLIKLEPFN-DGNYVLMSNIYAAKAQWDDAGKMRRLMKERNIVKNPG 472
NV L E + + +L+ + +G VL+SN+YA+ +W+ +MR+LM +R +PG
Sbjct: 492 IHHNVNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPG 551
Query: 473 CSVIEINDVVHEFMVGDGRHPCSEEIYSMLEYVAISLREECYAA 516
CS IE+N +VHEF V D HP EI + L + L + Y+A
Sbjct: 552 CSWIEVNGLVHEFRVADQLHPQIVEIRNKLNEILKRLSQIGYSA 595
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 273/494 (55%), Gaps = 19/494 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-------KLIESLVNSSQIAYAHL 86
LPLL + L Q VHA I+A S ++L L++ + YA
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL---DPDSFTYPILLKACGD 143
VF+ + + ++ +I G+ + L+ M+ GL P S L+AC
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASA--LRACAS 237
Query: 144 L---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
L R + +H+L+ KS ++ + + L++ Y G + A LFD+M K+ V+++A
Sbjct: 238 LDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 296
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
+++G+V+ E +F+KM+ VE + T+VS++ AC++L A + G+ H V
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ + AL DMYAKCG I+ + +VF ++ +++ +WN++I G IHG G+EA +F
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M G PD VT I +L+ACSH+GL+ +GK F+ M Y + P ++HY C+VDLL R
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 476
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
LDEAYE I++MP+ + +W +LL AC N++L + + +L P GN+V
Sbjct: 477 GFLDEAYEFIQSMPLRADVRVWVALLGACRVYK---NIDLGKKVSRMIQELGPEGTGNFV 533
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYS 500
L+SNIY+A ++D+A ++R + K + K+PGCS IEIN +H F+ GD HP S EIY
Sbjct: 534 LLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYR 593
Query: 501 MLEYVAISLREECY 514
L+ + + +++ Y
Sbjct: 594 ELDNILVGIKKLGY 607
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 186/392 (47%), Gaps = 27/392 (6%)
Query: 37 LQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L+ C+ L + +H I A T L++ V + + A +F +
Sbjct: 17 LKACSALADHHCGRAIHRHAIHAGLQADLFVST---ALLDMYVKCACLPDAAHIFATMPA 73
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQ--LYTQMIGNGLDPDSFTYPILLKAC---GDLRQVK 148
A+N ++ GYA G+ H + L QM + L P++ T LL G L Q
Sbjct: 74 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 133
Query: 149 GVHSLVV----------KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
VH+ + KSK + V+ T L+ Y G + A+ +FD M +N VTW
Sbjct: 134 SVHAYCIRACLHPNRNSKSKLTDGVLLG-TALLDMYAKCGSLLYARRVFDAMPARNEVTW 192
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGV-EVNELTLVSVLSACANLGASELGKWVHEFVN 257
+A+I G V + LF+ M G+ ++ ++ S L ACA+L +G+ +H +
Sbjct: 193 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLA 252
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
K+ + + G +L MYAK G I++A+ +F + K+ ++++++ G +G EEA
Sbjct: 253 KSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFL 312
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCLVDL 376
+F +MQ ++PD T+++++ ACSH ++ G+ + + R E ++ + L+D+
Sbjct: 313 VFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICN--ALIDM 370
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+ +D + +V MP + V W +++
Sbjct: 371 YAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAG 401
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 122 MIGNGLDPDSFTYPILLKACGDLRQ---VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG 178
M+ + + P+++T+P LKAC L + +H + + + + T L+ Y
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHA-GLQADLFVSTALLDMYVKCA 59
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID--LFRKMRDSGVEVNELTLVSV 236
+ A +F M +++V W AM+ G+ Y + L +M+ + N TLV++
Sbjct: 60 CLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVAL 119
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDK----------LGAALTDMYAKCGYIEEALR 286
L A GA G VH + + C+ N LG AL DMYAKCG + A R
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIA-VLTACSHAG 345
VF + +N TW+++IGG + +A +F M G+ T IA L AC+
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLD 239
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
+ G+++ + + V ++ L+ + +A L+D+A + M ++ + V + +L
Sbjct: 240 HLRMGEQL-HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSAL 297
Query: 406 LTA 408
++
Sbjct: 298 VSG 300
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 273/494 (55%), Gaps = 19/494 (3%)
Query: 34 LPLLQKCTHLVQFKQVHAQIIKASFDNRTISDTQLA-------KLIESLVNSSQIAYAHL 86
LPLL + L Q VHA I+A S ++L L++ + YA
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGL---DPDSFTYPILLKACGD 143
VF+ + + ++ +I G+ + L+ M+ GL P S L+AC
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASA--LRACAS 237
Query: 144 L---RQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTA 200
L R + +H+L+ KS ++ + + L++ Y G + A LFD+M K+ V+++A
Sbjct: 238 LDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 296
Query: 201 MINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNC 260
+++G+V+ E +F+KM+ VE + T+VS++ AC++L A + G+ H V
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 261 IILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFW 320
+ + AL DMYAKCG I+ + +VF ++ +++ +WN++I G IHG G+EA +F
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416
Query: 321 QMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRA 380
+M G PD VT I +L+ACSH+GL+ +GK F+ M Y + P ++HY C+VDLL R
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 476
Query: 381 RLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYV 440
LDEAYE I++MP+ + +W +LL AC N++L + + +L P GN+V
Sbjct: 477 GFLDEAYEFIQSMPLRADVRVWVALLGACRVYK---NIDLGKKVSRMIQELGPEGTGNFV 533
Query: 441 LMSNIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEIYS 500
L+SNIY+A ++D+A ++R + K + K+PGCS IEIN +H F+ GD HP S EIY
Sbjct: 534 LLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYR 593
Query: 501 MLEYVAISLREECY 514
L+ + + +++ Y
Sbjct: 594 ELDNILVGIKKLGY 607
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 186/392 (47%), Gaps = 27/392 (6%)
Query: 37 LQKCTHLVQF---KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIIN 93
L+ C+ L + +H I A T L++ V + + A +F +
Sbjct: 17 LKACSALADHHCGRAIHRHAIHAGLQADLFVST---ALLDMYVKCACLPDAAHIFATMPA 73
Query: 94 PSTFAFNTVIRGYAEAGLGHRGIQ--LYTQMIGNGLDPDSFTYPILLKAC---GDLRQVK 148
A+N ++ GYA G+ H + L QM + L P++ T LL G L Q
Sbjct: 74 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 133
Query: 149 GVHSLVV----------KSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTW 198
VH+ + KSK + V+ T L+ Y G + A+ +FD M +N VTW
Sbjct: 134 SVHAYCIRACLHPNRNSKSKLTDGVLLG-TALLDMYAKCGSLLYARRVFDAMPARNEVTW 192
Query: 199 TAMINGHVKQKNYREGIDLFRKMRDSGV-EVNELTLVSVLSACANLGASELGKWVHEFVN 257
+A+I G V + LF+ M G+ ++ ++ S L ACA+L +G+ +H +
Sbjct: 193 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLA 252
Query: 258 KNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVK 317
K+ + + G +L MYAK G I++A+ +F + K+ ++++++ G +G EEA
Sbjct: 253 KSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFL 312
Query: 318 MFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYN-MRRDYKVEPNVKHYGCLVDL 376
+F +MQ ++PD T+++++ ACSH ++ G+ + + R E ++ + L+D+
Sbjct: 313 VFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICN--ALIDM 370
Query: 377 LCRARLLDEAYEVIRNMPMEPNAVLWGSLLTA 408
+ +D + +V MP + V W +++
Sbjct: 371 YAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAG 401
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 122 MIGNGLDPDSFTYPILLKACGDLRQ---VKGVHSLVVKSKDFNSVIHSLTRLITFYCNFG 178
M+ + + P+++T+P LKAC L + +H + + + + T L+ Y
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHA-GLQADLFVSTALLDMYVKCA 59
Query: 179 DVKSAQLLFDQMTEKNVVTWTAMINGHVKQKNYREGID--LFRKMRDSGVEVNELTLVSV 236
+ A +F M +++V W AM+ G+ Y + L +M+ + N TLV++
Sbjct: 60 CLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVAL 119
Query: 237 LSACANLGASELGKWVHEFVNKNCIILNDK----------LGAALTDMYAKCGYIEEALR 286
L A GA G VH + + C+ N LG AL DMYAKCG + A R
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 287 VFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQMSGIKPDDVTLIA-VLTACSHAG 345
VF + +N TW+++IGG + +A +F M G+ T IA L AC+
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLD 239
Query: 346 LIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLLDEAYEVIRNMPMEPNAVLWGSL 405
+ G+++ + + V ++ L+ + +A L+D+A + M ++ + V + +L
Sbjct: 240 HLRMGEQL-HALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSAL 297
Query: 406 LTA 408
++
Sbjct: 298 VSG 300
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/415 (37%), Positives = 245/415 (59%), Gaps = 7/415 (1%)
Query: 87 VFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGDLRQ 146
VF+ + + ++N ++ GYA+ + + LY QM +GLDPD FT LL AC ++
Sbjct: 266 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS 325
Query: 147 V---KGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMTEKNVVTWTAMIN 203
+ + +H +++ ++ L++ Y G +AQ+LFD M +++V+W MI
Sbjct: 326 LHYGEEIHGFALRNGLAVDPFIGIS-LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIA 384
Query: 204 GHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHEFVNKNCIIL 263
G+ + E I+LFR+M G++ E+ ++ V AC+ L A LGK +H F K +
Sbjct: 385 GYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTE 444
Query: 264 NDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEEAVKMFWQMQ 323
+ + +++ DMYAK G I + R+F + EK+V +WN II G IHG G+EA+++F +M
Sbjct: 445 DIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKML 504
Query: 324 MSGIKPDDVTLIAVLTACSHAGLIEKGKEIFYNMRRDYKVEPNVKHYGCLVDLLCRARLL 383
G+KPDD T +L ACSHAGL+E G E F M + +EP ++HY C+VD+L RA +
Sbjct: 505 RLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRI 564
Query: 384 DEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPFNDGNYVLMS 443
D+A +I MP +P++ +W SLL++C N+ L E +L++LEP NYVL+S
Sbjct: 565 DDALRLIEEMPGDPDSRIWSSLLSSCRIH---GNLGLGEKVANKLLELEPEKPENYVLIS 621
Query: 444 NIYAAKAQWDDAGKMRRLMKERNIVKNPGCSVIEINDVVHEFMVGDGRHPCSEEI 498
N++A +WDD ++R MK+ + K+ GCS IE+ VH F++GD P EE+
Sbjct: 622 NLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEV 676
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 177/339 (52%), Gaps = 15/339 (4%)
Query: 25 NTATKSHHHLPLLQKCTHLVQF---KQVHAQIIKAS--FDNRTISDTQLAKLIESLVNSS 79
++A +S LLQ C +++H +++ AS F N + +T++ + + S
Sbjct: 100 DSAQRSEAMGVLLQACGQRKDIEVGRRLH-EMVSASTQFCNDFVLNTRIITMYSMCGSPS 158
Query: 80 QIAYAHLVFNQIINPSTFAFNTVIRGYAEAGLGHRGIQLYTQMIG-NGLDPDSFTYPILL 138
+ +VF+++ + F +N ++ Y L + +++++I PD+FT P ++
Sbjct: 159 D---SRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVI 215
Query: 139 KACG---DLRQVKGVHSLVVKSKDFNSVIHSLTRLITFYCNFGDVKSA-QLLFDQMTEKN 194
KAC DL + +H + K D S + LI Y G V+ A + +FD M K
Sbjct: 216 KACAGLLDLGLGQIIHGMATK-MDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKT 274
Query: 195 VVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEVNELTLVSVLSACANLGASELGKWVHE 254
V +W A++ G+ + + R+ +DL+ +M DSG++ + T+ S+L AC+ + + G+ +H
Sbjct: 275 VSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHG 334
Query: 255 FVNKNCIILNDKLGAALTDMYAKCGYIEEALRVFKIVLEKNVCTWNSIIGGLAIHGCGEE 314
F +N + ++ +G +L +Y CG A +F + +++ +WN +I G + +G +E
Sbjct: 335 FALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDE 394
Query: 315 AVKMFWQMQMSGIKPDDVTLIAVLTACSHAGLIEKGKEI 353
A+ +F QM GI+P ++ ++ V ACS + GKE+
Sbjct: 395 AINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKEL 433
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 47 KQVHAQIIKASFDNRTISDTQLAKLIESLVNSSQIAYAHLVFNQIINPSTFAFNTVIRGY 106
K++H +KA + + I+ I + +F+++ ++N +I GY
Sbjct: 431 KELHCFALKAHLTEDIFVSSSI---IDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGY 487
Query: 107 AEAGLGHRGIQLYTQMIGNGLDPDSFTYPILLKACGD----------LRQVKGVHSLVVK 156
G G ++L+ +M+ GL PD FT+ +L AC Q+ +H++ K
Sbjct: 488 GIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPK 547
Query: 157 SKDFNSVIHSLTRLITFYCNFGDVKSAQLLFDQMT-EKNVVTWTAMIN 203
+ + V+ L R G + A L ++M + + W+++++
Sbjct: 548 LEHYTCVVDMLGRA-------GRIDDALRLIEEMPGDPDSRIWSSLLS 588
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,741,086,232
Number of Sequences: 23463169
Number of extensions: 312995033
Number of successful extensions: 909485
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8433
Number of HSP's successfully gapped in prelim test: 3384
Number of HSP's that attempted gapping in prelim test: 756765
Number of HSP's gapped (non-prelim): 50658
length of query: 519
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 372
effective length of database: 8,910,109,524
effective search space: 3314560742928
effective search space used: 3314560742928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)