BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048580
(108 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3G4D|A Chain A, Crystal Structure Of (+)-Delta-Cadinene Synthase From
Gossypium Arboreum And Evolutionary Divergence Of Metal
Binding Motifs For Catalysis
pdb|3G4D|B Chain B, Crystal Structure Of (+)-Delta-Cadinene Synthase From
Gossypium Arboreum And Evolutionary Divergence Of Metal
Binding Motifs For Catalysis
pdb|3G4F|A Chain A, Crystal Structure Of (+)- -Cadinene Synthase From
Gossypium Arboreum In Complex With 2-Fluorofarnesyl
Diphosphate
pdb|3G4F|B Chain B, Crystal Structure Of (+)- -Cadinene Synthase From
Gossypium Arboreum In Complex With 2-Fluorofarnesyl
Diphosphate
Length = 554
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 11 QFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQV 70
+F+ +RE SA+ECY + GV+ +EA + V ++WK +N+E L PT +P +L
Sbjct: 457 KFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQE-FLKPTEMPTEVLNR 515
Query: 71 IFDLSCSADFMYNDAQDRFTH-STMMKDQVDLVLRDPIS 108
+L+ D +Y + D +T+ K + +L +PI+
Sbjct: 516 SLNLARVMDVLYREG-DGYTYVGKAAKGGITSLLIEPIA 553
>pdb|2J5C|A Chain A, Rational Conversion Of Substrate And Product Specificity
In A Monoterpene Synthase. Structural Insights Into The
Molecular Basis Of Rapid Evolution.
pdb|2J5C|B Chain B, Rational Conversion Of Substrate And Product Specificity
In A Monoterpene Synthase. Structural Insights Into The
Molecular Basis Of Rapid Evolution
Length = 569
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 13 EQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIF 72
E +R P +V+CY N+ SEEEA + + + +WK++N+E++ ++ ++V
Sbjct: 475 EVERGDVPKSVQCYMNEKNASEEEAREHVRSLIDQTWKMMNKEMM--TSSFSKYFVEVSA 532
Query: 73 DLSCSADFMYNDAQDRFTHSTMMKDQVDLVLRD 105
+L+ A ++Y D F M V+ +LRD
Sbjct: 533 NLARMAQWIYQHESDGF---GMQHSLVNKMLRD 562
>pdb|2ONG|A Chain A, Crystal Structure Of Of Limonene Synthase With 2-
Fluorogeranyl Diphosphate (Fgpp).
pdb|2ONG|B Chain B, Crystal Structure Of Of Limonene Synthase With 2-
Fluorogeranyl Diphosphate (Fgpp).
pdb|2ONH|A Chain A, Crystal Structure Of Of Limonene Synthase With 2-
Fluorolinalyl Diphosphate(flpp)
pdb|2ONH|B Chain B, Crystal Structure Of Of Limonene Synthase With 2-
Fluorolinalyl Diphosphate(flpp)
Length = 543
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 41/96 (42%)
Query: 13 EQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIF 72
E R P +++CY + SE EA K + +A WK +N E + + +
Sbjct: 448 EVSRGDVPKSLQCYMSDYNASEAEARKHVKWLIAEVWKKMNAERVSKDSPFGKDFIGCAV 507
Query: 73 DLSCSADFMYNDAQDRFTHSTMMKDQVDLVLRDPIS 108
DL A MY++ T ++ Q+ L +P +
Sbjct: 508 DLGRMAQLMYHNGDGHGTQHPIIHQQMTRTLFEPFA 543
>pdb|3M01|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase
Complexed With (2-Trans,6-Trans)-2-Fluorofarnesyl
Diphosphate
pdb|3M02|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase
Complexed With (2-Cis,6-Trans)-2-Fluorofarnesyl
Diphosphate
Length = 550
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 11 QFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQV 70
+ E+ R + +EC G+S +EA+ +WK INE LL PT + L
Sbjct: 452 EVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEG-LLRPTPVSTEFLTP 510
Query: 71 IFDLSCSADFMYNDAQDRFTH-STMMKDQVDLVLRDPI 107
I +L+ + Y D +TH ++K + +L D I
Sbjct: 511 ILNLARIVEVTYIHNLDGYTHPEKVLKPHIINLLVDSI 548
>pdb|4DI5|A Chain A, Co-Crystal Structure Of Wt 5-Epi-Aristolochene Synthase
From Nicotiana Tobaccum With Geraniline
Length = 535
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 11 QFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQV 70
+ E+ R + +EC G+S +EA+ +WK INE LL PT + L
Sbjct: 437 EVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEG-LLRPTPVSTEFLTP 495
Query: 71 IFDLSCSADFMYNDAQDRFTH-STMMKDQVDLVLRDPI 107
I +L+ + Y D +TH ++K + +L D I
Sbjct: 496 ILNLARIVEVTYIHNLDGYTHPEKVLKPHIINLLVDSI 533
>pdb|5EAU|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum
Length = 548
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 11 QFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQV 70
+ E+ R + +EC G+S +EA+ +WK INE LL PT + L
Sbjct: 450 EVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEG-LLRPTPVSTEFLTP 508
Query: 71 IFDLSCSADFMYNDAQDRFTH-STMMKDQVDLVLRDPI 107
I +L+ + Y D +TH ++K + +L D I
Sbjct: 509 ILNLARIVEVTYIHNLDGYTHPEKVLKPHIINLLVDSI 546
>pdb|5EAS|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum
Length = 548
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 11 QFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQV 70
+ E+ R + +EC G+S +EA+ +WK INE LL PT + L
Sbjct: 450 EVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEG-LLRPTPVSTEFLTP 508
Query: 71 IFDLSCSADFMYNDAQDRFTH-STMMKDQVDLVLRDPI 107
I +L+ + Y D +TH ++K + +L D I
Sbjct: 509 ILNLARIVEVTYIHNLDGYTHPEKVLKPHIINLLVDSI 546
>pdb|1HXC|A Chain A, Crystal Structure Of Teas C440w
Length = 548
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 11 QFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQV 70
+ E+ R + +EC G+S +EA+ +WK INE LL PT + L
Sbjct: 450 EVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEG-LLRPTPVSTEFLTP 508
Query: 71 IFDLSCSADFMYNDAQDRFTH 91
I +L+ + Y D +TH
Sbjct: 509 ILNLARIVEVTYIHNLDGYTH 529
>pdb|1HX9|A Chain A, Crystal Structure Of Teas W273s Form 1
pdb|1HXA|A Chain A, Crystal Structure Of Teas W273s Form 2
Length = 548
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 11 QFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQV 70
+ E+ R + +EC G+S +EA+ +WK INE LL PT + L
Sbjct: 450 EVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEG-LLRPTPVSTEFLTP 508
Query: 71 IFDLSCSADFMYNDAQDRFTH 91
I +L+ + Y D +TH
Sbjct: 509 ILNLARIVEVTYIHNLDGYTH 529
>pdb|1HXG|A Chain A, Crystal Structure Of Teas W273sC440W
Length = 548
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 11 QFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQV 70
+ E+ R + +EC G+S +EA+ +WK INE LL PT + L
Sbjct: 450 EVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEG-LLRPTPVSTEFLTP 508
Query: 71 IFDLSCSADFMYNDAQDRFTH 91
I +L+ + Y D +TH
Sbjct: 509 ILNLARIVEVTYIHNLDGYTH 529
>pdb|5EAT|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum With
Substrate Analog Farnesyl Hydroxyphosphonate
Length = 548
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 11 QFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQV 70
+ E+ R + +EC G+S +EA+ +WK INE LL PT + L
Sbjct: 450 EVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEG-LLRPTPVSTEFLTP 508
Query: 71 IFDLSCSADFMYNDAQDRFTH 91
I +L+ + Y D +TH
Sbjct: 509 ILNLARIVEVTYIHNLDGYTH 529
>pdb|3LZ9|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase M4
Mut Complexed With (2-Trans,6-Trans)-2-Fluorofarnesyl
Diphospha
pdb|3M00|A Chain A, Crystal Structure Of 5-Epi-Aristolochene Synthase M4
Mutant Complexed With (2-Cis,6-Trans)-2-Fluorofarnesyl
Diphosphate
Length = 550
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 11 QFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQV 70
+ E+ R + +EC G+S +EA+ +WK INE LL PT + L
Sbjct: 452 EVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEG-LLRPTPVSTEFLTP 510
Query: 71 IFDLSCSADFMYNDAQDRFTH-STMMKDQVDLVLRDPI 107
I +L+ + Y D +TH ++K + +L D I
Sbjct: 511 ILNLARIIEVTYIHNLDGYTHPEKVLKPHIINLLVDSI 548
>pdb|3P5P|A Chain A, Crystal Structure Of Taxadiene Synthase From Pacific Yew
(Taxus Brevifolia) In Complex With Mg2+ And
13-Aza-13,14-Dihydrocopalyl Diphosphate
pdb|3P5R|A Chain A, Crystal Structure Of Taxadiene Synthase From Pacific Yew
(Taxus Brevifolia) In Complex With Mg2+ And
2-Fluorogeranylgeranyl Diphosphate
pdb|3P5R|B Chain B, Crystal Structure Of Taxadiene Synthase From Pacific Yew
(Taxus Brevifolia) In Complex With Mg2+ And
2-Fluorogeranylgeranyl Diphosphate
Length = 764
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 11 QFEQKREHSPSAVECY-KNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQ 69
Q E+ R S + CY K+ G +EE+A+K + V + K + E IP+
Sbjct: 657 QAEKARGQQASGIACYMKDNPGATEEDAIKHICRVVDRALKEASFEYFKPSNDIPMGCKS 716
Query: 70 VIFDLSCSADFMYNDAQDRFTHSTMMKDQVDLVLRDPI 107
IF+L Y + +KD + V DPI
Sbjct: 717 FIFNLRLCVQIFYKFIDGYGIANEEIKDYIRKVYIDPI 754
>pdb|1N1B|A Chain A, Crystal Structure Of (+)-bornyl Diphosphate Synthase From
Sage
pdb|1N1B|B Chain B, Crystal Structure Of (+)-bornyl Diphosphate Synthase From
Sage
pdb|1N1Z|A Chain A, (+)-Bornyl Diphosphate Synthase: Complex With Mg And
Pyrophosphate
pdb|1N1Z|B Chain B, (+)-Bornyl Diphosphate Synthase: Complex With Mg And
Pyrophosphate
pdb|1N20|A Chain A, (+)-bornyl Diphosphate Synthase: Complex With Mg And
3-aza- 2,3-dihydrogeranyl Diphosphate
pdb|1N20|B Chain B, (+)-bornyl Diphosphate Synthase: Complex With Mg And
3-aza- 2,3-dihydrogeranyl Diphosphate
pdb|1N21|A Chain A, (+)-Bornyl Diphosphate Synthase: Cocrystal With Mg And 3-
Aza-2,3-Dihydrogeranyl Diphosphate
pdb|1N22|A Chain A, (+)-Bornyl Diphosphate Synthase: Complex With Mg,
Pyrophosphate, And (4r)-7-Aza-7,8-Dihydrolimonene
pdb|1N22|B Chain B, (+)-Bornyl Diphosphate Synthase: Complex With Mg,
Pyrophosphate, And (4r)-7-Aza-7,8-Dihydrolimonene
pdb|1N23|A Chain A, (+)-Bornyl Diphosphate Synthase: Complex With Mg,
Pyrophosphate, And (1r,4s)-2-Azabornane
pdb|1N23|B Chain B, (+)-Bornyl Diphosphate Synthase: Complex With Mg,
Pyrophosphate, And (1r,4s)-2-Azabornane
pdb|1N24|A Chain A, (+)-Bornyl Diphosphate Synthase: Complex With Mg And
Product
pdb|1N24|B Chain B, (+)-Bornyl Diphosphate Synthase: Complex With Mg And
Product
Length = 549
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 12 FEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLP 66
FE R P ++CY + SEEEAV+ + + +WK +N + P P
Sbjct: 454 FELARGDVPKTIQCYMKETNASEEEAVEHVKFLIREAWKDMNTAI---AAGYPFP 505
>pdb|3N0F|A Chain A, Crystal Structure Of Isoprene Synthase From Grey Poplar
Leaves (Populus X Canescens)
pdb|3N0F|B Chain B, Crystal Structure Of Isoprene Synthase From Grey Poplar
Leaves (Populus X Canescens)
pdb|3N0G|A Chain A, Crystal Structure Of Isoprene Synthase From Grey Poplar
Leaves (Populus X Canescens) In Complex With Three Mg2+
Ions And Dimethylallyl-S-Thiolodiphosphate
pdb|3N0G|B Chain B, Crystal Structure Of Isoprene Synthase From Grey Poplar
Leaves (Populus X Canescens) In Complex With Three Mg2+
Ions And Dimethylallyl-S-Thiolodiphosphate
Length = 555
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 13 EQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIF 72
E R + ++V CY G+SEE A +++ + +WK +N+E L + P ++
Sbjct: 457 EIARGETANSVSCYMRTKGISEELATESVMNLIDETWKKMNKE-KLGGSLFAKPFVETAI 515
Query: 73 DLSCSADFMYNDAQDRFTHSTMMKDQVDLVLRDPI 107
+L+ + Y++ + + + +V V+ +PI
Sbjct: 516 NLARQSHCTYHNGDAHTSPDELTRKRVLSVITEPI 550
>pdb|3S9V|A Chain A, Abietadiene Synthase From Abies Grandis
pdb|3S9V|B Chain B, Abietadiene Synthase From Abies Grandis
pdb|3S9V|C Chain C, Abietadiene Synthase From Abies Grandis
pdb|3S9V|D Chain D, Abietadiene Synthase From Abies Grandis
Length = 785
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 11 QFEQKREHSPSAVECY-KNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQ 69
Q E+ + SA++CY K+ +SEEEA++ + + N+ + +N E + N IP +
Sbjct: 688 QAERGQGEVASAIQCYMKDHPKISEEEALQHVYSVMENALEELNREFVNN--KIPDIYKR 745
Query: 70 VIFDLSCSADFMYNDAQD-RFTHSTMMKDQVDLVLRDPIS 108
++F+ + Y +H +K+ V L P++
Sbjct: 746 LVFETARIMQLFYMQGDGLTLSHDMEIKEHVKNCLFQPVA 785
>pdb|3TB6|A Chain A, Structure Of The Effector-binding Domain Of Arabinose
Repressor Arar From Bacillus Subtilis
pdb|3TB6|B Chain B, Structure Of The Effector-binding Domain Of Arabinose
Repressor Arar From Bacillus Subtilis
Length = 298
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 9/46 (19%), Positives = 24/46 (52%)
Query: 7 RVPPQFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVI 52
+V E+ +H P+A+ CY +++ + + ++ + L V ++
Sbjct: 189 KVKATLEKNSKHMPTAILCYNDEIALKVIDMLREMDLKVPEDMSIV 234
>pdb|2P4X|A Chain A, Crystal Structure Of Atp12 From Paracoccus Denitrificans
pdb|2P4X|B Chain B, Crystal Structure Of Atp12 From Paracoccus Denitrificans
pdb|2R31|A Chain A, Crystal Structure Of Atp12p From Paracoccus
Denitrificans
Length = 239
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Query: 38 VKALSLAVANSWKVINEELLLNPTAIPL 65
+AL+LA+A W+ + E +++P A+PL
Sbjct: 46 TEALALAIAEEWQAVQE--VIDPNAMPL 71
>pdb|2ZD2|A Chain A, D202k Mutant Of P. Denitrificans Atp12p
pdb|2ZD2|B Chain B, D202k Mutant Of P. Denitrificans Atp12p
Length = 234
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Query: 38 VKALSLAVANSWKVINEELLLNPTAIPL 65
+AL+LA+A W+ + E +++P A+PL
Sbjct: 42 TEALALAIAEEWQAVQE--VIDPNAMPL 67
>pdb|2ERO|A Chain A, Crystal Structure Of Vascular Apoptosis-inducing Protein-
1(orthorhombic Crystal Form)
pdb|2ERO|B Chain B, Crystal Structure Of Vascular Apoptosis-inducing Protein-
1(orthorhombic Crystal Form)
pdb|2ERP|A Chain A, Crystal Structure Of Vascular Apoptosis-Inducing
Protein-1(Inhibitor- Bound Form)
pdb|2ERP|B Chain B, Crystal Structure Of Vascular Apoptosis-Inducing
Protein-1(Inhibitor- Bound Form)
pdb|2ERQ|A Chain A, Crystal Structure Of Vascular Apoptosis-Inducing
Protein-1(Tetragonal Crystal Form)
pdb|2ERQ|B Chain B, Crystal Structure Of Vascular Apoptosis-Inducing
Protein-1(Tetragonal Crystal Form)
Length = 427
Score = 26.6 bits (57), Expect = 4.1, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 74 LSCSADFMYNDAQDRFTHSTMMKDQVDLVLRDPI 107
LSC A F+++D + ++K+ +L+ P+
Sbjct: 180 LSCEASFLFSDCSQKDHREFLIKNMPQCILKKPL 213
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,147,027
Number of Sequences: 62578
Number of extensions: 102048
Number of successful extensions: 261
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 231
Number of HSP's gapped (non-prelim): 24
length of query: 108
length of database: 14,973,337
effective HSP length: 72
effective length of query: 36
effective length of database: 10,467,721
effective search space: 376837956
effective search space used: 376837956
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)