Query 048580
Match_columns 108
No_of_seqs 110 out of 639
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 18:55:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048580.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048580hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n0f_A Isoprene synthase; terp 100.0 1.1E-37 3.7E-42 254.4 8.4 103 4-108 448-551 (555)
2 3m00_A Aristolochene synthase; 100.0 1E-37 3.5E-42 254.2 7.1 103 4-108 445-549 (550)
3 3g4d_A (+)-delta-cadinene synt 100.0 9.4E-38 3.2E-42 254.6 6.7 103 4-108 450-553 (554)
4 1n1b_A (+)-bornyl diphosphate 100.0 1.8E-36 6.2E-41 246.9 8.3 103 4-108 446-549 (549)
5 2ong_A 4S-limonene synthase; m 100.0 1.3E-35 4.3E-40 241.6 9.3 103 4-108 439-543 (543)
6 3sdr_A Alpha-bisabolene syntha 100.0 2.7E-35 9.2E-40 248.5 8.5 103 4-108 712-816 (817)
7 3p5p_A Taxadiene synthase; cla 100.0 3.3E-35 1.1E-39 246.6 7.8 103 4-108 650-755 (764)
8 2j5c_A 1,8-cineole synthase; t 100.0 3.5E-35 1.2E-39 240.1 5.8 102 4-108 466-569 (569)
9 3s9v_A Abietadiene synthase, c 100.0 1.9E-34 6.3E-39 242.6 8.0 102 4-108 681-785 (785)
10 1ps1_A Pentalenene synthase; a 99.5 3E-15 1E-19 113.6 3.6 54 4-57 218-271 (337)
11 3kb9_A EPI-isozizaene synthase 99.5 1.8E-14 6.1E-19 112.2 3.7 53 4-56 260-312 (382)
12 1di1_A Aristolochene synthase; 99.5 1.3E-14 4.5E-19 108.2 2.2 53 4-56 204-264 (300)
13 3bny_A Aristolochene synthase; 99.4 2.1E-13 7.3E-18 102.7 2.7 53 4-56 218-278 (320)
14 3v1v_A 2-MIB synthase, 2-methy 99.2 1.5E-11 5.1E-16 97.8 3.6 53 4-56 337-390 (433)
15 3pya_A ENT-copalyl diphosphate 98.9 6.3E-10 2.2E-14 93.3 2.9 60 38-107 658-719 (727)
16 1yyq_A Trichodiene synthase; t 96.5 0.0012 4.1E-08 51.4 2.8 72 4-79 224-296 (374)
17 3fau_A NEDD4-binding protein 2 77.9 2.5 8.4E-05 25.3 3.4 23 30-52 6-28 (82)
18 2ckx_A NGTRF1, telomere bindin 64.1 21 0.00073 21.6 5.5 54 48-102 22-76 (83)
19 2d9i_A NEDD4-binding protein 2 63.3 7.3 0.00025 23.9 3.3 21 30-50 14-34 (96)
20 2zqe_A MUTS2 protein; alpha/be 63.2 8.5 0.00029 23.2 3.5 21 30-50 10-30 (83)
21 1fc3_A SPO0A; response regulat 63.1 15 0.00053 23.9 5.0 49 28-76 56-114 (120)
22 1tr8_A Conserved protein (MTH1 59.4 5.6 0.00019 25.3 2.2 24 20-43 66-89 (102)
23 3emu_A Leucine rich repeat and 53.9 6.6 0.00023 26.0 2.0 25 20-44 102-127 (161)
24 3v2l_A AGAP005208-PA; odorant 52.5 6.8 0.00023 24.2 1.8 61 31-92 60-120 (120)
25 4akk_A Nitrate regulatory prot 52.4 8.4 0.00029 29.8 2.6 32 18-49 369-400 (423)
26 3qd7_X Uncharacterized protein 52.4 15 0.0005 24.4 3.5 36 14-51 39-74 (137)
27 3s4o_A Protein tyrosine phosph 52.2 7.4 0.00025 25.1 2.0 26 18-43 122-148 (167)
28 3rz2_A Protein tyrosine phosph 52.0 7.7 0.00026 26.2 2.1 26 17-42 129-154 (189)
29 1xri_A AT1G05000; structural g 51.7 6.7 0.00023 25.2 1.7 26 19-44 106-131 (151)
30 3tqc_A Pantothenate kinase; bi 49.2 9.5 0.00032 28.6 2.4 36 16-55 252-288 (321)
31 2aje_A Telomere repeat-binding 45.4 38 0.0013 21.5 4.5 53 48-102 35-89 (105)
32 2j16_A SDP-1, tyrosine-protein 44.9 11 0.00037 25.8 1.9 25 19-43 131-156 (182)
33 1rxd_A Protein tyrosine phosph 44.6 11 0.00039 23.9 1.9 27 17-43 108-134 (159)
34 3s4e_A Dual specificity protei 44.2 9.1 0.00031 24.5 1.4 25 20-44 96-121 (144)
35 1yn9_A BVP, polynucleotide 5'- 44.1 7.2 0.00025 25.7 0.9 25 19-43 127-152 (169)
36 3ic3_A Putative pyruvate dehyd 43.0 34 0.0011 21.8 3.9 22 24-45 62-83 (101)
37 2juh_A Telomere binding protei 42.2 69 0.0023 20.8 7.3 67 32-100 20-91 (121)
38 3ezz_A Dual specificity protei 41.6 7.5 0.00026 24.8 0.7 25 19-43 95-120 (144)
39 2c46_A MRNA capping enzyme; ph 40.9 11 0.00037 26.9 1.5 25 19-43 155-180 (241)
40 2dsy_A Hypothetical protein TT 37.4 39 0.0013 20.3 3.5 19 31-49 43-61 (87)
41 2roh_A RTBP1, telomere binding 36.4 87 0.003 20.3 6.5 67 32-101 34-106 (122)
42 2vkc_A NEDD4-binding protein 2 36.2 32 0.0011 22.4 3.1 20 30-49 59-78 (135)
43 2o6n_A RH4B designed peptide; 36.1 44 0.0015 16.7 3.6 23 34-56 4-26 (35)
44 2pq5_A Dual specificity protei 35.7 11 0.00038 25.9 0.8 24 20-43 146-170 (205)
45 1uzc_A Hypothetical protein FL 34.4 30 0.001 20.3 2.5 17 32-48 12-28 (71)
46 2hxp_A Dual specificity protei 34.3 16 0.00054 23.7 1.4 25 20-44 100-125 (155)
47 1ngm_B Transcription factor II 33.4 35 0.0012 20.3 2.7 21 32-57 41-61 (72)
48 3f81_A Dual specificity protei 33.4 17 0.00057 24.1 1.4 25 19-43 129-154 (183)
49 1zzw_A Dual specificity protei 32.8 18 0.0006 23.1 1.4 24 21-44 99-123 (149)
50 2img_A Dual specificity protei 32.6 18 0.00061 22.7 1.4 25 19-43 103-128 (151)
51 1ow4_A Pheromone binding prote 32.4 11 0.00036 24.1 0.2 37 2-38 3-39 (129)
52 1d0q_A DNA primase; zinc-bindi 31.7 36 0.0012 21.0 2.7 28 17-44 65-92 (103)
53 2nt2_A Protein phosphatase sli 31.3 19 0.00066 22.8 1.4 24 21-44 97-121 (145)
54 3rgo_A Protein-tyrosine phosph 31.3 19 0.00065 22.9 1.4 24 20-43 104-128 (157)
55 2r0b_A Serine/threonine/tyrosi 31.3 19 0.00065 23.0 1.4 24 21-44 106-130 (154)
56 3mtu_A Tropomyosin alpha-1 cha 31.2 23 0.00078 21.1 1.6 18 74-92 57-74 (75)
57 2oud_A Dual specificity protei 30.4 26 0.00089 23.2 2.0 25 20-44 102-127 (177)
58 1xju_A Lysozyme; secreted inac 30.3 1.2E+02 0.0041 20.2 5.4 45 31-77 43-91 (163)
59 3ewb_X 2-isopropylmalate synth 30.2 31 0.0011 25.3 2.6 80 22-103 103-189 (293)
60 3hdf_A Lysozyme; antimicrobial 30.1 1.1E+02 0.0039 19.7 5.6 40 31-73 40-79 (140)
61 2hcm_A Dual specificity protei 29.4 30 0.001 22.4 2.2 24 21-44 105-129 (164)
62 4e97_A Lysozyme; hydrolase, al 29.2 43 0.0015 22.8 3.0 46 31-76 80-131 (187)
63 1wrm_A Dual specificity phosph 29.1 28 0.00095 22.7 1.9 24 21-44 99-123 (165)
64 3cm3_A Late protein H1, dual s 28.9 27 0.00093 23.0 1.9 26 19-44 122-153 (176)
65 1xjt_A Lysozyme; open conforma 28.4 1.3E+02 0.0044 20.7 5.4 44 31-76 71-118 (191)
66 1fpz_A Cyclin-dependent kinase 28.2 29 0.00098 23.6 1.9 26 19-44 147-174 (212)
67 3nme_A Ptpkis1 protein, SEX4 g 27.9 29 0.00098 25.4 2.0 26 19-44 120-146 (294)
68 4evx_A Putative phage endolysi 27.7 1.1E+02 0.0038 18.8 6.0 42 31-75 49-94 (106)
69 2rmh_A Urocortin-3; CRF ligand 26.9 52 0.0018 17.2 2.3 16 62-77 6-21 (38)
70 4erc_A Dual specificity protei 26.3 38 0.0013 21.2 2.1 25 19-43 102-127 (150)
71 1esx_A VPR protein; helix, amp 26.1 69 0.0024 20.1 3.2 35 47-90 21-55 (96)
72 2g6z_A Dual specificity protei 25.4 27 0.00093 24.4 1.4 24 21-44 99-123 (211)
73 1nkz_B Light-harvesting protei 24.9 36 0.0012 18.1 1.5 16 31-47 2-17 (41)
74 2esb_A Dual specificity protei 24.9 29 0.00098 23.3 1.4 24 21-44 113-137 (188)
75 3rmj_A 2-isopropylmalate synth 24.6 36 0.0012 26.0 2.0 81 21-103 109-196 (370)
76 2dod_A Transcription elongatio 24.6 60 0.0021 19.5 2.7 43 31-73 13-64 (82)
77 3sjm_A Telomeric repeat-bindin 24.5 83 0.0028 17.7 3.2 45 31-77 13-61 (64)
78 1ghh_A DINI, DNA-damage-induci 24.2 72 0.0025 19.3 3.0 20 31-51 54-73 (81)
79 2e0t_A Dual specificity phosph 23.9 41 0.0014 21.2 2.0 23 21-43 101-124 (151)
80 2f46_A Hypothetical protein; s 23.8 59 0.002 21.0 2.8 23 22-44 118-140 (156)
81 2anv_A Lysozyme; direct method 23.8 1.5E+02 0.0052 19.1 6.0 37 31-70 50-86 (146)
82 2yzt_A Putative uncharacterize 23.4 50 0.0017 18.7 2.1 17 31-47 30-46 (67)
83 1b4u_A LIGA, LIGB, protocatech 23.3 57 0.002 21.8 2.6 28 24-55 58-85 (139)
84 3mmj_A MYO-inositol hexaphosph 23.1 27 0.00092 26.4 1.1 29 16-44 224-254 (314)
85 3hde_A Lysozyme; antimicrobial 23.0 1.7E+02 0.006 19.5 5.6 42 31-75 65-110 (165)
86 4aqn_A Pesticin; toxin, bacter 22.8 1.1E+02 0.0037 23.6 4.3 55 26-90 243-307 (357)
87 1wj7_A Hypothetical protein (R 22.6 70 0.0024 20.3 2.8 20 23-42 43-62 (104)
88 1w0t_A Telomeric repeat bindin 22.6 95 0.0032 16.4 3.1 29 47-76 23-51 (53)
89 3ig9_A SOC small outer capsid 22.2 28 0.00097 21.0 0.8 16 47-63 61-76 (78)
90 2ztj_A Homocitrate synthase; ( 22.2 87 0.003 23.7 3.8 77 24-103 99-183 (382)
91 1ceu_A Protein (HIV-1 regulato 22.1 1.1E+02 0.0038 16.9 3.3 24 48-74 22-45 (51)
92 2wgp_A Dual specificity protei 21.8 50 0.0017 22.2 2.2 24 21-44 119-143 (190)
93 1n13_B PVLARGDC, pyruvoyl-depe 21.6 49 0.0017 21.3 1.9 27 25-51 53-81 (113)
94 1yz4_A DUSP15, dual specificit 21.3 49 0.0017 21.2 2.0 23 21-43 100-123 (160)
95 1ohe_A CDC14B, CDC14B2 phospha 21.3 29 0.00099 26.2 0.9 26 19-44 283-309 (348)
96 3n0a_A Tyrosine-protein phosph 20.9 36 0.0012 26.0 1.3 28 17-44 127-156 (361)
97 1lgh_B LH II, B800/850, light 20.8 46 0.0016 18.1 1.4 17 31-48 7-23 (45)
98 3rxy_A NIF3 protein; structura 20.6 1.7E+02 0.0057 21.8 4.9 47 26-83 87-133 (278)
99 2y96_A Dual specificity phosph 20.6 29 0.00097 24.2 0.7 24 20-43 154-178 (219)
100 3tq7_B Microtubule-associated 20.6 38 0.0013 20.6 1.2 18 74-92 49-66 (82)
101 1sau_A Sulfite reductase, desu 20.2 22 0.00075 23.1 0.0 34 24-57 16-61 (115)
No 1
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=100.00 E-value=1.1e-37 Score=254.37 Aligned_cols=103 Identities=23% Similarity=0.418 Sum_probs=97.6
Q ss_pred CCCCCchHHhhhcCCCcchhhhhhhcCCCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCHHHHHHHHHHHhhhhhhcc
Q 048580 4 GGGRVPPQFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIFDLSCSADFMYN 83 (108)
Q Consensus 4 ~nDi~s~~~E~~rg~~~s~v~cYMke~g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~N~aR~~~~~Y~ 83 (108)
+|||+||++|++||+++|+|+|||+|||+|+|||+++|+++|+++||+||++++ +++++|++|++++||+||++++||+
T Consensus 448 ~NDi~S~~~E~~rG~vas~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l-~~~~~p~~~~~~~~n~aR~~~~~Y~ 526 (555)
T 3n0f_A 448 CNDLASASAEIARGETANSVSCYMRTKGISEELATESVMNLIDETWKKMNKEKL-GGSLFAKPFVETAINLARQSHCTYH 526 (555)
T ss_dssp HHHHHHHHHHHTTTCCCSHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH-SCCSSCHHHHHHHHHHHHHHHHHSC
T ss_pred hccchhhhhhhhcCCcchHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 599999999999999999999999999999999999999999999999999999 8889999999999999999999999
Q ss_pred cCCCCCCCc-hhHHHHHHhhhcccCC
Q 048580 84 DAQDRFTHS-TMMKDQVDLVLRDPIS 108 (108)
Q Consensus 84 ~~~Dg~t~~-~~~k~~I~sll~~Pi~ 108 (108)
++||||.| ..+|++|++||++|||
T Consensus 527 -~~Dg~t~~~~~~k~~i~~ll~~Pi~ 551 (555)
T 3n0f_A 527 -NGDAHTSPDELTRKRVLSVITEPIL 551 (555)
T ss_dssp -CC---CCHHHHHHHHHHHHTTSCCC
T ss_pred -CCCCCCCccHHHHHHHHHHHhcCCC
Confidence 99999998 6899999999999996
No 2
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=100.00 E-value=1e-37 Score=254.22 Aligned_cols=103 Identities=27% Similarity=0.464 Sum_probs=96.3
Q ss_pred CCCCCchHHhhhcCCCcchhhhhhhcCCCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCHHHHHHHHHHHhhhhhhcc
Q 048580 4 GGGRVPPQFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIFDLSCSADFMYN 83 (108)
Q Consensus 4 ~nDi~s~~~E~~rg~~~s~v~cYMke~g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~N~aR~~~~~Y~ 83 (108)
+|||+||++|++||+++|+|+|||||||+|+|||+++|+++|+++||+||++++ +++++|++|+++++|+||++++||+
T Consensus 445 ~NDI~S~k~E~~rG~vas~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l-~~~~~p~~~~~~~~NlaR~~~~~Y~ 523 (550)
T 3m00_A 445 IDDTATYEVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLL-RPTPVSTEFLTPILNLARIIEVTYI 523 (550)
T ss_dssp HHHHHSHHHHHHTTCTTSHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTS-SSCSSCGGGTHHHHHHHHHHHHHTS
T ss_pred eccchhHHHHHhcCCcccHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 599999999999999999999999999999999999999999999999999999 8889999999999999999999999
Q ss_pred cCC-CCCCCc-hhHHHHHHhhhcccCC
Q 048580 84 DAQ-DRFTHS-TMMKDQVDLVLRDPIS 108 (108)
Q Consensus 84 ~~~-Dg~t~~-~~~k~~I~sll~~Pi~ 108 (108)
++ ||||.| ..+|++|++||++|||
T Consensus 524 -~~~Dg~t~~~~~~k~~i~~ll~~Pi~ 549 (550)
T 3m00_A 524 -HNLDGYTHPEKVLKPHIINLLVDSIK 549 (550)
T ss_dssp -CC-----CCHHHHHHHHHHHHTCCCC
T ss_pred -CCCCCCCCccHHHHHHHHHHhhCCCC
Confidence 88 999999 6899999999999996
No 3
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=100.00 E-value=9.4e-38 Score=254.64 Aligned_cols=103 Identities=30% Similarity=0.558 Sum_probs=89.7
Q ss_pred CCCCCchHHhhhcCCCcchhhhhhhcCCCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCHHHHHHHHHHHhhhhhhcc
Q 048580 4 GGGRVPPQFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIFDLSCSADFMYN 83 (108)
Q Consensus 4 ~nDi~s~~~E~~rg~~~s~v~cYMke~g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~N~aR~~~~~Y~ 83 (108)
+|||+||++|++||+++|+|+|||+|||+|+|||+++|+++|+++||+||++++ +++++|++|++++||+||++++||+
T Consensus 450 ~NDI~S~k~E~~rG~van~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l-~~~~~p~~~~~~~~NlaR~~~~~Y~ 528 (554)
T 3g4d_A 450 MDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQEFL-KPTEMPTEVLNRSLNLARVMDVLYR 528 (554)
T ss_dssp HHHHHHHCC------CCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHS-SSCSSCHHHHHHHHHHHHHHHHHSC
T ss_pred hcccchhhhhhccCCccHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 599999999999999999999999999999999999999999999999999999 8889999999999999999999999
Q ss_pred cCCCCCCCc-hhHHHHHHhhhcccCC
Q 048580 84 DAQDRFTHS-TMMKDQVDLVLRDPIS 108 (108)
Q Consensus 84 ~~~Dg~t~~-~~~k~~I~sll~~Pi~ 108 (108)
++||||.| ..+|++|++||++|||
T Consensus 529 -~~Dg~t~~~~~~k~~i~~ll~~Pi~ 553 (554)
T 3g4d_A 529 -EGDGYTYVGKAAKGGITSLLIEPIA 553 (554)
T ss_dssp -C-----CCCHHHHHHHHHHHTCCCC
T ss_pred -CCCCCCCccHHHHHHHHHHhcCCCC
Confidence 99999998 7899999999999996
No 4
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=100.00 E-value=1.8e-36 Score=246.87 Aligned_cols=103 Identities=22% Similarity=0.394 Sum_probs=88.7
Q ss_pred CCCCCchHHhhhcCCCcchhhhhhhcCCCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCHHHHHHHHHHHhhhhhhcc
Q 048580 4 GGGRVPPQFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIFDLSCSADFMYN 83 (108)
Q Consensus 4 ~nDi~s~~~E~~rg~~~s~v~cYMke~g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~N~aR~~~~~Y~ 83 (108)
+|||+||++|++||+++|+|+|||+|||+|+|||+++++++|+++||+||++++ +++++|++|+++++|+||++++||+
T Consensus 446 ~NDi~S~~~E~~rG~v~n~V~cyMke~g~s~eeA~~~i~~~i~~~wk~ln~e~l-~~~~vp~~~~~~~~n~~R~~~~~Y~ 524 (549)
T 1n1b_A 446 PDDLGTSYFELARGDVPKTIQCYMKETNASEEEAVEHVKFLIREAWKDMNTAIA-AGYPFPDGMVAGAANIGRVAQFIYL 524 (549)
T ss_dssp HHHHC---------CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-TCCSSCHHHHHHHHHHHHHHHHHTT
T ss_pred hcccchhhhhhccCCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHeeehhee
Confidence 599999999999999999999999999999999999999999999999999999 8888999999999999999999999
Q ss_pred cCCCCCCCc-hhHHHHHHhhhcccCC
Q 048580 84 DAQDRFTHS-TMMKDQVDLVLRDPIS 108 (108)
Q Consensus 84 ~~~Dg~t~~-~~~k~~I~sll~~Pi~ 108 (108)
++||||.| ..+|++|++||++|||
T Consensus 525 -~~Dg~t~~~~~~k~~i~~l~~~pi~ 549 (549)
T 1n1b_A 525 -HGDGFGVQHSKTYEHIAGLLFEPYA 549 (549)
T ss_dssp -TSCCC----CHHHHHHHHHHTSCCC
T ss_pred -CCCCCCCCcHHHHHHHHHHhcCCCC
Confidence 99999998 6899999999999997
No 5
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=100.00 E-value=1.3e-35 Score=241.59 Aligned_cols=103 Identities=23% Similarity=0.376 Sum_probs=99.8
Q ss_pred CCCCCchHHhhhcCCCcchhhhhhhcCCCCHHHHHHHHHHHHHHHHHHHhHhH-hcCCCCCCHHHHHHHHHHHhhhhhhc
Q 048580 4 GGGRVPPQFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEEL-LLNPTAIPLPLLQVIFDLSCSADFMY 82 (108)
Q Consensus 4 ~nDi~s~~~E~~rg~~~s~v~cYMke~g~s~EeA~~~i~~~ie~~wK~ln~e~-l~~~~~~p~~~~~~~~N~aR~~~~~Y 82 (108)
+|||+||++|++||+++|+|+|||+|||+|+|||+++++++|+++||+||+++ + +++++|++|+++++|+||+++++|
T Consensus 439 ~NDi~S~~~E~~rG~~~n~V~cyMke~g~s~eeA~~~i~~~ie~~wk~ln~e~~l-~~~~vp~~~~~~~~n~aR~~~~~Y 517 (543)
T 2ong_A 439 ADDLGTSVEEVSRGDVPKSLQCYMSDYNASEAEARKHVKWLIAEVWKKMNAERVS-KDSPFGKDFIGCAVDLGRMAQLMY 517 (543)
T ss_dssp HHHHHSSHHHHHTSCCCCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHTC-SSCSSCHHHHHHHHHHHHHHHHHT
T ss_pred hcccchhhhccccCCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCCCHHHHHHHHHHHHeehhhe
Confidence 59999999999999999999999999999999999999999999999999999 9 888899999999999999999999
Q ss_pred ccCCCCCCCc-hhHHHHHHhhhcccCC
Q 048580 83 NDAQDRFTHS-TMMKDQVDLVLRDPIS 108 (108)
Q Consensus 83 ~~~~Dg~t~~-~~~k~~I~sll~~Pi~ 108 (108)
+ ++||||.| ..+|++|++||++|||
T Consensus 518 ~-~~D~~t~~~~~~k~~i~~l~~~pi~ 543 (543)
T 2ong_A 518 H-NGDGHGTQHPIIHQQMTRTLFEPFA 543 (543)
T ss_dssp S-SCSTTSSSCTTHHHHHHHHHTSCC-
T ss_pred e-CCCCCCCccHHHHHHHHHHhccCCC
Confidence 9 99999999 7899999999999997
No 6
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=100.00 E-value=2.7e-35 Score=248.46 Aligned_cols=103 Identities=22% Similarity=0.402 Sum_probs=94.2
Q ss_pred CCCCCchHHhhhcCCCcchhhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCHHHHHHHHHHHhhhhhhc
Q 048580 4 GGGRVPPQFEQKREHSPSAVECYKNQL-GVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIFDLSCSADFMY 82 (108)
Q Consensus 4 ~nDi~s~~~E~~rg~~~s~v~cYMke~-g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~N~aR~~~~~Y 82 (108)
+|||+||++|++||+++|+|+|||||| |+|+|||+++|+++|+++||+||++++ +++++|++|+++++|+||++++||
T Consensus 712 ~NDi~S~k~E~~rG~~assV~cYMke~~gvS~EeA~~~i~~~Ie~~wKeln~e~l-~~~~~p~~~~~~~ln~aR~~~~~Y 790 (817)
T 3sdr_A 712 ADDTKTYKAEKARGELASSIECYMKDHPECTEEEALDHIYSILEPAVKELTREFL-KPDDVPFACKKMLFEETRVTMVIF 790 (817)
T ss_dssp HHHHHSSCC------CCCHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHHHHHHHH-SCCSSCHHHHHHHHHHHHHHHHHT
T ss_pred hccchHHHHHHhcCCcchHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHh
Confidence 599999999999999999999999999 799999999999999999999999999 888999999999999999999999
Q ss_pred ccCCCCCCCc-hhHHHHHHhhhcccCC
Q 048580 83 NDAQDRFTHS-TMMKDQVDLVLRDPIS 108 (108)
Q Consensus 83 ~~~~Dg~t~~-~~~k~~I~sll~~Pi~ 108 (108)
+ ++||||.| .++|++|++||++||+
T Consensus 791 ~-~~Dg~t~~~~~~k~~i~~ll~~pi~ 816 (817)
T 3sdr_A 791 K-DGDGFGVSKLEVKDHIKECLIEPLP 816 (817)
T ss_dssp C-SCCSSCCCHHHHHHHHHHHHTCCCC
T ss_pred c-CCCCCCCchHHHHHHHHHHhcCCCC
Confidence 9 99999998 7899999999999996
No 7
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=100.00 E-value=3.3e-35 Score=246.59 Aligned_cols=103 Identities=26% Similarity=0.413 Sum_probs=92.6
Q ss_pred CCCCCchHHhhhcCCCcchhhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHhHhHhcC-CCCCCHHHHHHHHHHHhhhhhh
Q 048580 4 GGGRVPPQFEQKREHSPSAVECYKNQL-GVSEEEAVKALSLAVANSWKVINEELLLN-PTAIPLPLLQVIFDLSCSADFM 81 (108)
Q Consensus 4 ~nDi~s~~~E~~rg~~~s~v~cYMke~-g~s~EeA~~~i~~~ie~~wK~ln~e~l~~-~~~~p~~~~~~~~N~aR~~~~~ 81 (108)
+|||+||++|++||+++|+|+|||||| |+|+|||+++|+++|+++||+||++++ + ++++|++|+++++|+||++++|
T Consensus 650 ~NDi~S~k~E~~rG~~as~V~cYMke~~gvSeEeA~~~i~~~Ie~~wKeln~e~l-~~~~~~p~~~~~~~~n~aR~~~~~ 728 (764)
T 3p5p_A 650 TNDTKTYQAEKARGQQASGIACYMKDNPGATEEDAIKHICRVVDRALKEASFEYF-KPSNDIPMGCKSFIFNLRLCVQIF 728 (764)
T ss_dssp HHHHHHHHHHHTTTCCCSHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHH-SCCSSSCHHHHHHHHHTHHHHHHH
T ss_pred hhcccchHHHHhcCCcchHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHh-hCCCCCCHHHHHHHHHHHHHHHHH
Confidence 499999999999999999999999999 899999999999999999999999999 7 6789999999999999999999
Q ss_pred cccCCCCCCCc-hhHHHHHHhhhcccCC
Q 048580 82 YNDAQDRFTHS-TMMKDQVDLVLRDPIS 108 (108)
Q Consensus 82 Y~~~~Dg~t~~-~~~k~~I~sll~~Pi~ 108 (108)
|+ ++||||.| .++|++|++||++||+
T Consensus 729 Y~-~~Dg~t~~~~~~k~~i~~ll~~Pi~ 755 (764)
T 3p5p_A 729 YK-FIDGYGIANEEIKDYIRKVYIDPIQ 755 (764)
T ss_dssp SC-C-------CCCHHHHHHHHHTCCCC
T ss_pred hc-CCCCCCCCcHHHHHHHHHHHhcCCc
Confidence 99 99999998 5799999999999986
No 8
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=100.00 E-value=3.5e-35 Score=240.13 Aligned_cols=102 Identities=23% Similarity=0.412 Sum_probs=82.6
Q ss_pred CCCCCchHHhhhcCCCcchhhhhhhcCCCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCHHHHHHHHHHHhhhhhhcc
Q 048580 4 GGGRVPPQFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIFDLSCSADFMYN 83 (108)
Q Consensus 4 ~nDi~s~~~E~~rg~~~s~v~cYMke~g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~N~aR~~~~~Y~ 83 (108)
+|||+||++|++||+++|+|+|||+|||+|+|||+++++++|+++||+||++++ + +++|++|+++++|+||+++++|+
T Consensus 466 ~NDI~S~~~E~~rG~v~s~V~cyMke~g~s~eeA~~~i~~~ie~~wk~ln~e~l-~-~~vp~~~~~~~~nlaR~~~~~Y~ 543 (569)
T 2j5c_A 466 ADDMGTSLDEVERGDVPKSVQCYMNEKNASEEEAREHVRSLIDQTWKMMNKEMM-T-SSFSKYFVEVSANLARMAQWIYQ 543 (569)
T ss_dssp HHHHHC----------CCHHHHC------CCHHHHHHHHHHHHHHHHHHHHHHH-H-CCSCHHHHHHHHHHHHHHHHHTG
T ss_pred hcccchhhhhcccCCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHh-c-cCCCHHHHHHHHHHHheeehhcc
Confidence 599999999999999999999999999999999999999999999999999999 7 88999999999999999999999
Q ss_pred cCC-CCCCCc-hhHHHHHHhhhcccCC
Q 048580 84 DAQ-DRFTHS-TMMKDQVDLVLRDPIS 108 (108)
Q Consensus 84 ~~~-Dg~t~~-~~~k~~I~sll~~Pi~ 108 (108)
++ ||||.| ..+|++|++||++|||
T Consensus 544 -~~~Dg~t~~~~~~k~~i~~ll~~pi~ 569 (569)
T 2j5c_A 544 -HESDGFGMQHSLVNKMLRDLLFHRYE 569 (569)
T ss_dssp -GGSCTTC-CCCHHHHHHHHHHTSCCC
T ss_pred -CCCcCCCCchHHHHHHHHHHhccCCC
Confidence 99 999999 7899999999999997
No 9
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=100.00 E-value=1.9e-34 Score=242.56 Aligned_cols=102 Identities=25% Similarity=0.387 Sum_probs=94.5
Q ss_pred CCCCCchHHhhhcCCCcchhhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCHHHHHHHHHHHhhhhhhc
Q 048580 4 GGGRVPPQFEQKREHSPSAVECYKNQL-GVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIFDLSCSADFMY 82 (108)
Q Consensus 4 ~nDi~s~~~E~~rg~~~s~v~cYMke~-g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~N~aR~~~~~Y 82 (108)
+|||+||++|++||+++|+|+|||||| |+|+|||+++|+++|+++||+||++++ +++ +|++|+++++|+||++++||
T Consensus 681 ~NDi~S~k~E~~rG~~as~V~cYMke~~gvSeEeA~~~i~~~Ie~~wKeln~e~l-~~~-~p~~~~~~~~n~aR~~~~~Y 758 (785)
T 3s9v_A 681 VNDTKTYQAERGQGEVASAIQCYMKDHPKISEEEALQHVYSVMENALEELNREFV-NNK-IPDIYKRLVFETARIMQLFY 758 (785)
T ss_dssp HHHHHHHHHHHHHSCCCSHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHHT
T ss_pred hcccchhhHHHhcCCcchHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCC-CCHHHHHHHHHHHHHHHHHh
Confidence 599999999999999999999999999 999999999999999999999999999 777 99999999999999999999
Q ss_pred ccCCCCCCCc-h-hHHHHHHhhhcccCC
Q 048580 83 NDAQDRFTHS-T-MMKDQVDLVLRDPIS 108 (108)
Q Consensus 83 ~~~~Dg~t~~-~-~~k~~I~sll~~Pi~ 108 (108)
+ ++||||.| . ++|++|++||++||.
T Consensus 759 ~-~~Dg~t~~~~~~~k~~i~~ll~~Pi~ 785 (785)
T 3s9v_A 759 M-QGDGLTLSHDMEIKEHVKNCLFQPVA 785 (785)
T ss_dssp C-CCC----CHHHHHHHHHHHHHTSCCC
T ss_pred c-CCCCCCCCChHHHHHHHHHHhcccCC
Confidence 9 99999998 4 699999999999983
No 10
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A
Probab=99.53 E-value=3e-15 Score=113.57 Aligned_cols=54 Identities=13% Similarity=0.009 Sum_probs=52.0
Q ss_pred CCCCCchHHhhhcCCCcchhhhhhhcCCCCHHHHHHHHHHHHHHHHHHHhHhHh
Q 048580 4 GGGRVPPQFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELL 57 (108)
Q Consensus 4 ~nDi~s~~~E~~rg~~~s~v~cYMke~g~s~EeA~~~i~~~ie~~wK~ln~e~l 57 (108)
.|||.||++|+++|+++|+|.|||+++|+|+|+|+++++++|+++||++|++.-
T Consensus 218 ~NDl~S~~kE~~~G~~~n~V~~~m~~~g~s~eeA~~~v~~~i~~~~~~~~~~~~ 271 (337)
T 1ps1_A 218 LNDIASLEKEEARGEQNNMVMILRREHGWSKSRSVSHMQNEVRARLEQYLLLES 271 (337)
T ss_dssp HHHHHTHHHHHHTTCCCSHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHhcCCcchHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 499999999999999999999999999999999999999999999999999874
No 11
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A*
Probab=99.47 E-value=1.8e-14 Score=112.19 Aligned_cols=53 Identities=9% Similarity=-0.078 Sum_probs=50.9
Q ss_pred CCCCCchHHhhhcCCCcchhhhhhhcCCCCHHHHHHHHHHHHHHHHHHHhHhH
Q 048580 4 GGGRVPPQFEQKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEEL 56 (108)
Q Consensus 4 ~nDi~s~~~E~~rg~~~s~v~cYMke~g~s~EeA~~~i~~~ie~~wK~ln~e~ 56 (108)
.|||.||++|+++|+++|+|.|||+++|+|+|+|+++++++|++.||++|+..
T Consensus 260 ~NDi~S~~kE~~~G~~~N~V~~~m~~~g~s~eeA~~~v~~~i~~~~k~~~~~~ 312 (382)
T 3kb9_A 260 YNDLCSLPKEIAGDEVHNLGISLITHHSLTLEEAIGEVRRRVEECITEFLAVE 312 (382)
T ss_dssp HHHHHHHHHHHHTTCCCSHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999843
No 12
>1di1_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid biosynthesis, lyase; 2.50A {Penicillium roqueforti} SCOP: a.128.1.4 PDB: 1dgp_A
Probab=99.46 E-value=1.3e-14 Score=108.15 Aligned_cols=53 Identities=13% Similarity=-0.024 Sum_probs=48.9
Q ss_pred CCCCCchHHhhhcCC--------CcchhhhhhhcCCCCHHHHHHHHHHHHHHHHHHHhHhH
Q 048580 4 GGGRVPPQFEQKREH--------SPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEEL 56 (108)
Q Consensus 4 ~nDi~s~~~E~~rg~--------~~s~v~cYMke~g~s~EeA~~~i~~~ie~~wK~ln~e~ 56 (108)
.|||.||++|+++|+ ++|+|.|||+++|+|+|+|+++++++|++.||++|+..
T Consensus 204 ~NDl~S~~kE~~~g~~~h~~~~~~~n~V~~~m~~~g~s~eeA~~~~~~~i~~~~~~~~~~~ 264 (300)
T 1di1_A 204 VNDIYSYDKEEEASRTGHKEGAFLCSAVKVLAEESKLGIPATKRVLWSMTREWETVHDEIV 264 (300)
T ss_dssp HHHHHHTTTTCCC----------CCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHhhccccccccccchhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 499999999999998 78999999999999999999999999999999999875
No 13
>3bny_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid, farnesyl diphosphate, magnesium, cyclization, lyase; HET: FPF; 1.89A {Aspergillus terreus} PDB: 2e4o_A 2oa6_A* 3bnx_A* 3cke_A*
Probab=99.35 E-value=2.1e-13 Score=102.67 Aligned_cols=53 Identities=11% Similarity=-0.061 Sum_probs=47.6
Q ss_pred CCCCCchHHhhhcCC--------CcchhhhhhhcCCCCHHHHHHHHHHHHHHHHHHHhHhH
Q 048580 4 GGGRVPPQFEQKREH--------SPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEEL 56 (108)
Q Consensus 4 ~nDi~s~~~E~~rg~--------~~s~v~cYMke~g~s~EeA~~~i~~~ie~~wK~ln~e~ 56 (108)
.|||.||++|+++|+ ++|+|.|||+++|+|+|+|+++++++|++.|+++|+..
T Consensus 218 ~NDl~S~~kE~~~g~~~~~~~~~~~N~V~~~m~~~g~s~eeA~~~~~~~i~~~~~~~~~l~ 278 (320)
T 3bny_A 218 VNDIYSYEKELYTSKTAHSEGGILCTSVQILAQEADVTAEAAKRVLFVMCREWELRHQLLV 278 (320)
T ss_dssp HHHHHHHHHHCC-----------CCSHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccchhHHHHHhhcccccccccccchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 499999999999998 78999999999999999999999999999999999865
No 14
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A*
Probab=99.15 E-value=1.5e-11 Score=97.80 Aligned_cols=53 Identities=6% Similarity=-0.134 Sum_probs=48.6
Q ss_pred CCCCCchHHhhhcC-CCcchhhhhhhcCCCCHHHHHHHHHHHHHHHHHHHhHhH
Q 048580 4 GGGRVPPQFEQKRE-HSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEEL 56 (108)
Q Consensus 4 ~nDi~s~~~E~~rg-~~~s~v~cYMke~g~s~EeA~~~i~~~ie~~wK~ln~e~ 56 (108)
.|||.||++|+++| ++.|+|.|||+++|+|+|||++++.++|++.+++..+..
T Consensus 337 ~NDI~Sy~kE~~~gg~~~N~V~~~mke~g~S~eeA~~~v~~~i~~~~~~F~~~~ 390 (433)
T 3v1v_A 337 VNDLYSYTKELNSPGRHLNLPVVIAEREQLCERDAYLKAVEVHNELQHSFEAAA 390 (433)
T ss_dssp HHHHHSHHHHTTSSSCCCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hchHHHHHHHHhcCCCCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 59999999999995 788999999999999999999999999999999876543
No 15
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=98.87 E-value=6.3e-10 Score=93.29 Aligned_cols=60 Identities=10% Similarity=0.088 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHhHhHhcCCC--CCCHHHHHHHHHHHhhhhhhcccCCCCCCCchhHHHHHHhhhcccC
Q 048580 38 VKALSLAVANSWKVINEELLLNPT--AIPLPLLQVIFDLSCSADFMYNDAQDRFTHSTMMKDQVDLVLRDPI 107 (108)
Q Consensus 38 ~~~i~~~ie~~wK~ln~e~l~~~~--~~p~~~~~~~~N~aR~~~~~Y~~~~Dg~t~~~~~k~~I~sll~~Pi 107 (108)
.+++++.||..|++|+|.++ +++ .+|++| |+++|+..||. . ||+.|. |..+|.++|++|+
T Consensus 658 ~~~~~~~IE~~mqEL~~lVl-~~~~~~ip~~~-----tf~~V~ksFYy-~--ay~~p~-i~~hI~kVl~~~~ 719 (727)
T 3pya_A 658 KEKTIKSMEKEMGKMVELAL-SESDTFRDVSI-----TFLDVAKAFYY-F--ALCGDH-LQTHISKVLFQKV 719 (727)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-SCCTTTHHHHH-----HHHHHHHHHHH-H--HHHTTS-CHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHh-ccCCCCCCCcc-----cHHHHHHHHHh-h--hcCCHH-HHHHHHHHHcCcc
Confidence 66899999999999999999 754 699999 99999999999 5 999988 9999999999997
No 16
>1yyq_A Trichodiene synthase; terpenoid cyclase fold, site-directed mutant, pyrophosphate, lyase; 2.10A {Fusarium sporotrichioides} PDB: 1yj4_A 1yyr_A* 1yys_A* 1jfa_A 1jfg_A 2q9y_A* 2q9z_A 2ael_A* 2aek_A* 2aet_A 2ps7_A 2ps8_A 1kiy_A 1kiz_A 1yyt_A* 1yyu_A* 2ps5_A 2ps4_A 2ps6_A
Probab=96.54 E-value=0.0012 Score=51.44 Aligned_cols=72 Identities=17% Similarity=0.057 Sum_probs=56.5
Q ss_pred CCCCCchHHhhh-cCCCcchhhhhhhcCCCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCHHHHHHHHHHHhhhh
Q 048580 4 GGGRVPPQFEQK-REHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIFDLSCSAD 79 (108)
Q Consensus 4 ~nDi~s~~~E~~-rg~~~s~v~cYMke~g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~N~aR~~~ 79 (108)
+|||-||.+|.. .|+..|.|..++.++|+|.++|+.++..++...-.++-+ .+ .. ..| .+++.+-+..|.-.
T Consensus 224 ~NDIlSf~KE~~~~Gd~~NlV~vl~~~~g~S~~eAl~~v~~~~~~~~~r~~~-~L-~~-~~~-~~l~al~~~irG~l 296 (374)
T 1yyq_A 224 VNDLMSFYKEFDDERDQISLVKNYVVSDEISLHEALEKLTQDTLHSSKQMVA-VF-SD-KDP-QVMDTIECFMHGYV 296 (374)
T ss_dssp HHHHHHHHHHTTCSSCCCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH-HH-SS-SCH-HHHHHHHHHHHHHH
T ss_pred hhhhhccchhhhccCCccchhhhehhcCCCCHHHHHHHHHHHHHHHHHHHHH-Hh-cc-CCH-HHHHHHHHHHhHhH
Confidence 699999999997 499999999999999999999999999999888877754 44 32 233 35566666666543
No 17
>3fau_A NEDD4-binding protein 2; SMR, small-MUTS related domain, nicking endonuclease, alternative splicing, ATP-binding, coiled coil, cytoplasm, hydrolase; 1.90A {Homo sapiens} SCOP: d.68.8.1
Probab=77.93 E-value=2.5 Score=25.33 Aligned_cols=23 Identities=17% Similarity=0.224 Sum_probs=20.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Q 048580 30 LGVSEEEAVKALSLAVANSWKVI 52 (108)
Q Consensus 30 ~g~s~EeA~~~i~~~ie~~wK~l 52 (108)
||.+.+||+..+...+.++|...
T Consensus 6 HGl~v~eA~~~l~~~l~~~~~~~ 28 (82)
T 3fau_A 6 HGLHVDEALEHLMRVLEKKTEEF 28 (82)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHh
Confidence 79999999999999999888643
No 18
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=64.09 E-value=21 Score=21.58 Aligned_cols=54 Identities=11% Similarity=0.035 Sum_probs=36.7
Q ss_pred HHHHHhHhHhc-CCCCCCHHHHHHHHHHHhhhhhhcccCCCCCCCchhHHHHHHhh
Q 048580 48 SWKVINEELLL-NPTAIPLPLLQVIFDLSCSADFMYNDAQDRFTHSTMMKDQVDLV 102 (108)
Q Consensus 48 ~wK~ln~e~l~-~~~~~p~~~~~~~~N~aR~~~~~Y~~~~Dg~t~~~~~k~~I~sl 102 (108)
.|++|-+..+. -+..-+..|++..-|+.|....-+. -..|=..|.++.+.|.++
T Consensus 22 ~W~~I~~~~~~~~~~RT~~~lKdrWrnllk~~~~~p~-~~~~~~~p~~~~~rv~~~ 76 (83)
T 2ckx_A 22 RWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQ-QRRGEPVPQDLLDRVLAA 76 (83)
T ss_dssp CHHHHHHHHCTTCTTSCHHHHHHHHHHHHHHHHSCGG-GCCSSCCCHHHHHHHHHH
T ss_pred CcHHHHHhhccccCCCCHHHHHHHHHHHHHhccCCcc-cccCCCCCHHHHHHHHHH
Confidence 79999886330 1345788999999999988776664 444444566776666553
No 19
>2d9i_A NEDD4-binding protein 2; SMR domain, N4BP2, BCL-3 binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.68.8.1
Probab=63.31 E-value=7.3 Score=23.87 Aligned_cols=21 Identities=19% Similarity=0.259 Sum_probs=19.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 048580 30 LGVSEEEAVKALSLAVANSWK 50 (108)
Q Consensus 30 ~g~s~EeA~~~i~~~ie~~wK 50 (108)
||.+.+||+..+...|.+++.
T Consensus 14 HGl~v~eA~~~L~~~L~~~~~ 34 (96)
T 2d9i_A 14 HGLHVDEALEHLMRVLEKKTE 34 (96)
T ss_dssp TTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 799999999999999998764
No 20
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=63.16 E-value=8.5 Score=23.22 Aligned_cols=21 Identities=19% Similarity=0.262 Sum_probs=19.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 048580 30 LGVSEEEAVKALSLAVANSWK 50 (108)
Q Consensus 30 ~g~s~EeA~~~i~~~ie~~wK 50 (108)
||.+.|||+..+...|.++..
T Consensus 10 hG~~~~eA~~~l~~fl~~a~~ 30 (83)
T 2zqe_A 10 RGLTVAEALLEVDQALEEARA 30 (83)
T ss_dssp TTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 699999999999999998884
No 21
>1fc3_A SPO0A; response regulator, signaling protein; 2.00A {Geobacillus stearothermophilus} SCOP: a.4.6.3 PDB: 1lq1_A
Probab=63.14 E-value=15 Score=23.88 Aligned_cols=49 Identities=10% Similarity=0.179 Sum_probs=33.5
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHHH-----HhHhHh-----cCCCCCCHHHHHHHHHHHh
Q 048580 28 NQLGVSEEEAVKALSLAVANSWKV-----INEELL-----LNPTAIPLPLLQVIFDLSC 76 (108)
Q Consensus 28 ke~g~s~EeA~~~i~~~ie~~wK~-----ln~e~l-----~~~~~~p~~~~~~~~N~aR 76 (108)
+.||+|...-.+.|+..|+.+|.. |++-+- .+..|-+..|+..+.+--|
T Consensus 56 ~k~~TT~s~VEraIR~aIe~aw~~g~~~~l~~ifg~t~~~~~~kPTnsEFI~~iad~Lr 114 (120)
T 1fc3_A 56 KKYNTTASRVERAIRHAIEVAWSRGNLESISSLFGYTVSVSKAKPTNSEFIAMVADKLR 114 (120)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHSSCTTTTHHHHCHHHHTCSSCCCHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCcccCCCCCCHHHHHHHHHHHHH
Confidence 467999999999999999999975 333320 0123456667776666555
No 22
>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}
Probab=59.42 E-value=5.6 Score=25.32 Aligned_cols=24 Identities=38% Similarity=0.447 Sum_probs=20.1
Q ss_pred cchhhhhhhcCCCCHHHHHHHHHH
Q 048580 20 PSAVECYKNQLGVSEEEAVKALSL 43 (108)
Q Consensus 20 ~s~v~cYMke~g~s~EeA~~~i~~ 43 (108)
..-|+.-|.|-|+|.++|++.+++
T Consensus 66 ~edi~lv~~q~~vs~~~A~~aL~~ 89 (102)
T 1tr8_A 66 EDDIELVMNQTGASREDATRALQE 89 (102)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHH
Confidence 355888899999999999988764
No 23
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=53.85 E-value=6.6 Score=25.97 Aligned_cols=25 Identities=16% Similarity=0.065 Sum_probs=18.8
Q ss_pred cchhhhh-hhcCCCCHHHHHHHHHHH
Q 048580 20 PSAVECY-KNQLGVSEEEAVKALSLA 44 (108)
Q Consensus 20 ~s~v~cY-Mke~g~s~EeA~~~i~~~ 44 (108)
++.+-+| |+.+|.|.++|.+.++..
T Consensus 102 ~~vv~ayLm~~~~~s~~~A~~~v~~~ 127 (161)
T 3emu_A 102 PAIVIAFLMYYQRLSFINAFNKVQGL 127 (161)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 4556677 456799999999988753
No 24
>3v2l_A AGAP005208-PA; odorant binding olfaction, general odorant binding protein, transport, secreted, odorant-binding protein; HET: PG4; 1.80A {Anopheles gambiae} PDB: 4f7f_A* 3vb1_A
Probab=52.47 E-value=6.8 Score=24.21 Aligned_cols=61 Identities=7% Similarity=-0.026 Sum_probs=31.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCHHHHHHHHHHHhhhhhhcccCCCCCCCc
Q 048580 31 GVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIFDLSCSADFMYNDAQDRFTHS 92 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~N~aR~~~~~Y~~~~Dg~t~~ 92 (108)
|+..+.+++.+..++.+..++-.++.+.++.....+-.+.+--..++..++|+ ...-|-+|
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~d~Ce~A~~~~~C~~~-~~p~~~FP 120 (120)
T 3v2l_A 60 KLNYDASVKQIDTIMPDELAGPMRAALDICRTVADGIKNNCDAAYVLLQCLSK-NNPKFIFP 120 (120)
T ss_dssp EECHHHHHHHHHHHSCHHHHHHHHHHHHHTTTTTTTCCSHHHHHHHHHHHHHH-TCTTCCCC
T ss_pred CccHHHHHHHHHHhccchhHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHH-hCCCccCc
Confidence 34577888877776544443322222212222211222334444556788898 66656554
No 25
>4akk_A Nitrate regulatory protein; transcription; 2.14A {Klebsiella oxytoca}
Probab=52.43 E-value=8.4 Score=29.83 Aligned_cols=32 Identities=22% Similarity=0.134 Sum_probs=25.2
Q ss_pred CCcchhhhhhhcCCCCHHHHHHHHHHHHHHHH
Q 048580 18 HSPSAVECYKNQLGVSEEEAVKALSLAVANSW 49 (108)
Q Consensus 18 ~~~s~v~cYMke~g~s~EeA~~~i~~~ie~~w 49 (108)
-+.-+..+.|+.+|+|++||.+.|++.--+.-
T Consensus 369 ~i~~Akg~lm~~~~~~e~~A~~~l~~~sm~~~ 400 (423)
T 4akk_A 369 LIEKAKSVLMTYQGMQEEQAWQALRKMAMDKN 400 (423)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhCcCHHHHHHHHHHHHHHcC
Confidence 34456678899999999999999988765544
No 26
>3qd7_X Uncharacterized protein YDAL; alpha/beta/alpha fold, endonuclease, hydrolase; 2.30A {Escherichia coli}
Probab=52.39 E-value=15 Score=24.38 Aligned_cols=36 Identities=14% Similarity=0.016 Sum_probs=25.9
Q ss_pred hhcCCCcchhhhhhhcCCCCHHHHHHHHHHHHHHHHHH
Q 048580 14 QKREHSPSAVECYKNQLGVSEEEAVKALSLAVANSWKV 51 (108)
Q Consensus 14 ~~rg~~~s~v~cYMke~g~s~EeA~~~i~~~ie~~wK~ 51 (108)
..+|+. .++.-+-=||.+.+||+..+...|.++...
T Consensus 39 Lr~G~~--~~~~~LDLHG~~~~EA~~~L~~fL~~a~~~ 74 (137)
T 3qd7_X 39 LRSGKY--PQQASLNLLRQPVEECRKMVFSFIQQALAD 74 (137)
T ss_dssp HHSCCC--CGGGEEECTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHCCCC--CCCeEEECCCCCHHHHHHHHHHHHHHHHHC
Confidence 345553 234334447999999999999999998863
No 27
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=52.20 E-value=7.4 Score=25.07 Aligned_cols=26 Identities=19% Similarity=0.169 Sum_probs=20.2
Q ss_pred CCcchhhhhhhcC-CCCHHHHHHHHHH
Q 048580 18 HSPSAVECYKNQL-GVSEEEAVKALSL 43 (108)
Q Consensus 18 ~~~s~v~cYMke~-g~s~EeA~~~i~~ 43 (108)
-.+..+-||+... |++.++|++.+++
T Consensus 122 RTg~~~a~~L~~~~~~~~~~a~~~vr~ 148 (167)
T 3s4o_A 122 RAPILVALALVEYGNVSALDAIALIRE 148 (167)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3456678887777 9999999888764
No 28
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=51.99 E-value=7.7 Score=26.19 Aligned_cols=26 Identities=23% Similarity=0.231 Sum_probs=20.2
Q ss_pred CCCcchhhhhhhcCCCCHHHHHHHHH
Q 048580 17 EHSPSAVECYKNQLGVSEEEAVKALS 42 (108)
Q Consensus 17 g~~~s~v~cYMke~g~s~EeA~~~i~ 42 (108)
|-.+..+-||+...|++.++|++.++
T Consensus 129 gRSg~~va~~L~~~g~~~~~a~~~vr 154 (189)
T 3rz2_A 129 GRAPVLVALALIEGGMKYEDAVQFIR 154 (189)
T ss_dssp TTHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 34556788998878999999987664
No 29
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=51.69 E-value=6.7 Score=25.17 Aligned_cols=26 Identities=8% Similarity=0.033 Sum_probs=20.8
Q ss_pred CcchhhhhhhcCCCCHHHHHHHHHHH
Q 048580 19 SPSAVECYKNQLGVSEEEAVKALSLA 44 (108)
Q Consensus 19 ~~s~v~cYMke~g~s~EeA~~~i~~~ 44 (108)
.+..+.|||+..|++.++|.+.++..
T Consensus 106 Tg~~~a~~l~~~g~~~~~a~~~~~~~ 131 (151)
T 1xri_A 106 TGCLVGCLRKLQKWCLTSIFDEYQRF 131 (151)
T ss_dssp HHHHHHHHHHHTTBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHh
Confidence 34556789998899999999887655
No 30
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=49.17 E-value=9.5 Score=28.60 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=26.4
Q ss_pred cCCCcchhhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHhHh
Q 048580 16 REHSPSAVECYKNQL-GVSEEEAVKALSLAVANSWKVINEE 55 (108)
Q Consensus 16 rg~~~s~v~cYMke~-g~s~EeA~~~i~~~ie~~wK~ln~e 55 (108)
||..-.-+..|..++ +.|+|+|.+.+..+ |..+|+-
T Consensus 252 r~~a~~~~~s~~~~y~~~s~~ea~~~a~~~----w~~~~~p 288 (321)
T 3tqc_A 252 WRTTFKDPHSYFHYLTQMSETEVAAFAKHV----WNEINKV 288 (321)
T ss_dssp HHTGGGSTTSTTGGGGGSCHHHHHHHHHHH----HHHTHHH
T ss_pred hhhhccChHHHHHHHhcCCHHHHHHHHHHH----HHhcccc
Confidence 444445567889999 89999999766554 8887744
No 31
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=45.41 E-value=38 Score=21.47 Aligned_cols=53 Identities=9% Similarity=0.016 Sum_probs=35.8
Q ss_pred HHHHHhHhHhcC--CCCCCHHHHHHHHHHHhhhhhhcccCCCCCCCchhHHHHHHhh
Q 048580 48 SWKVINEELLLN--PTAIPLPLLQVIFDLSCSADFMYNDAQDRFTHSTMMKDQVDLV 102 (108)
Q Consensus 48 ~wK~ln~e~l~~--~~~~p~~~~~~~~N~aR~~~~~Y~~~~Dg~t~~~~~k~~I~sl 102 (108)
.|++|-+.++ . +..-+..|++..-|+.|....-.. -..|=..|.++.+.|.+|
T Consensus 35 ~W~~I~~~~~-~~f~~RT~v~lKdrWrnllk~~~~~p~-~~rg~~~P~~~l~rv~~~ 89 (105)
T 2aje_A 35 RWRDVKLCAF-EDADHRTYVDLKDKWKTLVHTAKISPQ-QRRGEPVPQELLNRVLNA 89 (105)
T ss_dssp SHHHHHSSSS-SSTTCCCHHHHHHHHHHHHHTTTCCTT-TTTCCSCCCHHHHHHHHH
T ss_pred ChHHHHHHhc-cccCCCCHHHHHHHHHHHHhhccCCcc-cccCCCCCHHHHHHHHHH
Confidence 8999987653 2 445678999999999987765554 333434455666666554
No 32
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=44.88 E-value=11 Score=25.82 Aligned_cols=25 Identities=16% Similarity=0.139 Sum_probs=19.0
Q ss_pred Ccchhhhhh-hcCCCCHHHHHHHHHH
Q 048580 19 SPSAVECYK-NQLGVSEEEAVKALSL 43 (108)
Q Consensus 19 ~~s~v~cYM-ke~g~s~EeA~~~i~~ 43 (108)
.++.+-+|+ +..|.|.++|.+.++.
T Consensus 131 S~tvv~ayLm~~~~~s~~~A~~~v~~ 156 (182)
T 2j16_A 131 SATLIIAYIMKYHNLSLRHSYDLLKS 156 (182)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 455667885 5569999999998876
No 33
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=44.59 E-value=11 Score=23.93 Aligned_cols=27 Identities=22% Similarity=0.203 Sum_probs=19.9
Q ss_pred CCCcchhhhhhhcCCCCHHHHHHHHHH
Q 048580 17 EHSPSAVECYKNQLGVSEEEAVKALSL 43 (108)
Q Consensus 17 g~~~s~v~cYMke~g~s~EeA~~~i~~ 43 (108)
|-.+..+-+|+...|++.++|++.++.
T Consensus 108 ~Rtg~~~a~~l~~~~~~~~~a~~~vr~ 134 (159)
T 1rxd_A 108 GRAPVLVALALIEGGMKYEDAVQFIRQ 134 (159)
T ss_dssp TTHHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 344566778887789999998877653
No 34
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=44.18 E-value=9.1 Score=24.48 Aligned_cols=25 Identities=16% Similarity=-0.023 Sum_probs=18.7
Q ss_pred cchhhhhhhc-CCCCHHHHHHHHHHH
Q 048580 20 PSAVECYKNQ-LGVSEEEAVKALSLA 44 (108)
Q Consensus 20 ~s~v~cYMke-~g~s~EeA~~~i~~~ 44 (108)
++.+-+|+.. .|.|.++|.+.++..
T Consensus 96 ~~~v~ayLm~~~~~~~~~A~~~v~~~ 121 (144)
T 3s4e_A 96 AAIVIGFLMNSEQTSFTSAFSLVKNA 121 (144)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4556788654 599999999888654
No 35
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=44.06 E-value=7.2 Score=25.68 Aligned_cols=25 Identities=24% Similarity=0.339 Sum_probs=19.8
Q ss_pred Ccchhhhhhhc-CCCCHHHHHHHHHH
Q 048580 19 SPSAVECYKNQ-LGVSEEEAVKALSL 43 (108)
Q Consensus 19 ~~s~v~cYMke-~g~s~EeA~~~i~~ 43 (108)
.+..+-||+.. .|+|.++|++.++.
T Consensus 127 Tg~~va~~L~~~~~~~~~~a~~~~r~ 152 (169)
T 1yn9_A 127 TGYMVCRYLMHTLGIAPQEAIDRFEK 152 (169)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 44567889887 59999999987764
No 36
>3ic3_A Putative pyruvate dehydrogenase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE BGC; 1.80A {Rhodopseudomonas palustris}
Probab=43.05 E-value=34 Score=21.80 Aligned_cols=22 Identities=18% Similarity=0.312 Sum_probs=17.7
Q ss_pred hhhhhcCCCCHHHHHHHHHHHH
Q 048580 24 ECYKNQLGVSEEEAVKALSLAV 45 (108)
Q Consensus 24 ~cYMke~g~s~EeA~~~i~~~i 45 (108)
..|-++.|+|++||++.|.+..
T Consensus 62 ~a~a~~~~~s~~eal~rI~egF 83 (101)
T 3ic3_A 62 RSYARESEYTEDEALERIVEMF 83 (101)
T ss_dssp HHHHHTSSCCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHHH
Confidence 4677888999999999885543
No 37
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=42.22 E-value=69 Score=20.79 Aligned_cols=67 Identities=13% Similarity=0.083 Sum_probs=42.5
Q ss_pred CCHHH--HHHHHHHHHHH-HHHHHhHhHhcC--CCCCCHHHHHHHHHHHhhhhhhcccCCCCCCCchhHHHHHH
Q 048580 32 VSEEE--AVKALSLAVAN-SWKVINEELLLN--PTAIPLPLLQVIFDLSCSADFMYNDAQDRFTHSTMMKDQVD 100 (108)
Q Consensus 32 ~s~Ee--A~~~i~~~ie~-~wK~ln~e~l~~--~~~~p~~~~~~~~N~aR~~~~~Y~~~~Dg~t~~~~~k~~I~ 100 (108)
.|.|| ++...-+.... .|++|-+.+. . +..-+..|++..-|+.|....-.. -.-|.+.|.+....|.
T Consensus 20 WT~EEd~~L~~gV~k~G~G~W~~Ia~~~~-~~f~~RT~v~lKdRWrnllk~~~~~p~-~krg~~~p~e~~~rv~ 91 (121)
T 2juh_A 20 FSVAEVEALVEAVEHLGTGRWRDVKMRAF-DNADHRTYVDLKDKWKTLVHTASIAPQ-QRRGEPVPQDLLDRVL 91 (121)
T ss_dssp CCHHHHHHHHHHHHHHGGGCHHHHHHHHC-SCCSSCCSHHHHHHHHHHHHHHHTCST-TCCCSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHhc-cccCCCCHHHHHHHHHHHHhhhccCCc-ccCCCCCCHHHHHHHH
Confidence 56443 44333333334 8999988863 2 355788999999999997655444 4556666655555443
No 38
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=41.65 E-value=7.5 Score=24.77 Aligned_cols=25 Identities=24% Similarity=0.130 Sum_probs=18.4
Q ss_pred Ccchhhhhhhc-CCCCHHHHHHHHHH
Q 048580 19 SPSAVECYKNQ-LGVSEEEAVKALSL 43 (108)
Q Consensus 19 ~~s~v~cYMke-~g~s~EeA~~~i~~ 43 (108)
.++.+-+|+-. .|+|.++|.+.+++
T Consensus 95 S~~~~~aylm~~~~~~~~~A~~~v~~ 120 (144)
T 3ezz_A 95 SATICLAYLMMKKRVRLEEAFEFVKQ 120 (144)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHT
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 34556788655 59999999988764
No 39
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=40.86 E-value=11 Score=26.94 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=19.6
Q ss_pred Ccchhhhhhhc-CCCCHHHHHHHHHH
Q 048580 19 SPSAVECYKNQ-LGVSEEEAVKALSL 43 (108)
Q Consensus 19 ~~s~v~cYMke-~g~s~EeA~~~i~~ 43 (108)
.+..|-|||.+ .|+|.++|++.++.
T Consensus 155 TGt~ia~yLm~~~~~s~~eAi~~vr~ 180 (241)
T 2c46_A 155 TGFLICAFLVEKMDWSIEAAVATFAQ 180 (241)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 45678899766 59999999988764
No 40
>2dsy_A Hypothetical protein TTHA0281; structural genomics, thermus thermophilus HB8, NPPSFA; HET: NHE; 1.90A {Thermus thermophilus} SCOP: d.304.1.2
Probab=37.43 E-value=39 Score=20.26 Aligned_cols=19 Identities=26% Similarity=0.219 Sum_probs=15.7
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 048580 31 GVSEEEAVKALSLAVANSW 49 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie~~w 49 (108)
|-|.|||++.+++.++..-
T Consensus 43 G~T~eEA~~~a~eAl~~~l 61 (87)
T 2dsy_A 43 GKSLKECEANLQAALEDWL 61 (87)
T ss_dssp ESSHHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHHHH
Confidence 6689999999999888543
No 41
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=36.44 E-value=87 Score=20.31 Aligned_cols=67 Identities=15% Similarity=0.089 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHHHH---H-HHHHHhHhHhcC--CCCCCHHHHHHHHHHHhhhhhhcccCCCCCCCchhHHHHHHh
Q 048580 32 VSEEEAVKALSLAVA---N-SWKVINEELLLN--PTAIPLPLLQVIFDLSCSADFMYNDAQDRFTHSTMMKDQVDL 101 (108)
Q Consensus 32 ~s~EeA~~~i~~~ie---~-~wK~ln~e~l~~--~~~~p~~~~~~~~N~aR~~~~~Y~~~~Dg~t~~~~~k~~I~s 101 (108)
.|.||-. .+.+.++ . .|++|-+..+ . +..-+..|++..-|+.|....=.. -.-|-..|.++.+.|..
T Consensus 34 WT~EEd~-~L~~gV~k~G~g~W~~I~~~~~-~~~~~RT~vdlKdRWrnllk~~~~~p~-~kr~~~~p~e~~~~v~~ 106 (122)
T 2roh_A 34 FTVAEVE-LLVEAVEHLGTGRWRDVKFRAF-ENVHHRTYVDLKDKWKTLVHTASIAPQ-QRRGAPVPQELLDRVLA 106 (122)
T ss_dssp CCHHHHH-HHHHHHHHHSSSCHHHHHHHHH-SSSCCCCHHHHHHHHHHHHHHHHSCTT-TCCCSSCCHHHHHHHHH
T ss_pred CCHHHHH-HHHHHHHHHCCCChHHHHHHhc-cccCCCCHHHHHHHHHHHHhhccCCcc-ccCCCCCCHHHHHHHHH
Confidence 5655432 3444444 2 8999988764 2 456788999999999987665444 34455556665555543
No 42
>2vkc_A NEDD4-binding protein 2; human BCL3 binding protein, alternative splicing, homologous recombination, mismatch repair, small MUTS related; NMR {Homo sapiens}
Probab=36.15 E-value=32 Score=22.37 Aligned_cols=20 Identities=20% Similarity=0.252 Sum_probs=17.9
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 048580 30 LGVSEEEAVKALSLAVANSW 49 (108)
Q Consensus 30 ~g~s~EeA~~~i~~~ie~~w 49 (108)
||.+.+||+..+...|.++.
T Consensus 59 HGl~v~EA~~~L~~fL~~a~ 78 (135)
T 2vkc_A 59 HGLHVDEALEHLMRVLEKKT 78 (135)
T ss_dssp TTCCHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHH
Confidence 79999999999999998764
No 43
>2o6n_A RH4B designed peptide; right-handed, tetramer, de novo protein; HET: CGU; 1.10A {Synthetic} SCOP: k.17.1.1 PDB: 1tgg_A*
Probab=36.07 E-value=44 Score=16.74 Aligned_cols=23 Identities=26% Similarity=0.300 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhH
Q 048580 34 EEEAVKALSLAVANSWKVINEEL 56 (108)
Q Consensus 34 ~EeA~~~i~~~ie~~wK~ln~e~ 56 (108)
.|.|.++|.-+|..+-.++.++.
T Consensus 4 ieqakkeiaylikkakeeileei 26 (35)
T 2o6n_A 4 IEQAKKEIAYLIKKAKEEILEEI 26 (35)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 47788888888888887777664
No 44
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=35.67 E-value=11 Score=25.91 Aligned_cols=24 Identities=13% Similarity=0.116 Sum_probs=17.6
Q ss_pred cchhhhhh-hcCCCCHHHHHHHHHH
Q 048580 20 PSAVECYK-NQLGVSEEEAVKALSL 43 (108)
Q Consensus 20 ~s~v~cYM-ke~g~s~EeA~~~i~~ 43 (108)
++.|-||+ +..|+|.++|++.++.
T Consensus 146 ~tvv~aYLm~~~~~s~~~A~~~vr~ 170 (205)
T 2pq5_A 146 ATLVLAFLMIYENMTLVEAIQTVQA 170 (205)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 44567775 5569999999987764
No 45
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=34.38 E-value=30 Score=20.32 Aligned_cols=17 Identities=24% Similarity=0.253 Sum_probs=15.0
Q ss_pred CCHHHHHHHHHHHHHHH
Q 048580 32 VSEEEAVKALSLAVANS 48 (108)
Q Consensus 32 ~s~EeA~~~i~~~ie~~ 48 (108)
.|.|||.+.+.+|+++.
T Consensus 12 ~t~eea~~~F~~LL~e~ 28 (71)
T 1uzc_A 12 NTKEEAKQAFKELLKEK 28 (71)
T ss_dssp CSHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHc
Confidence 58999999999999874
No 46
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=34.26 E-value=16 Score=23.74 Aligned_cols=25 Identities=16% Similarity=0.145 Sum_probs=17.6
Q ss_pred cchhhhhhh-cCCCCHHHHHHHHHHH
Q 048580 20 PSAVECYKN-QLGVSEEEAVKALSLA 44 (108)
Q Consensus 20 ~s~v~cYMk-e~g~s~EeA~~~i~~~ 44 (108)
++.+-||+. ..|+|.++|.+.+++.
T Consensus 100 ~~vv~ayLm~~~~~~~~~A~~~v~~~ 125 (155)
T 2hxp_A 100 VTVTVAYLMQKLHLSLNDAYDLVKRK 125 (155)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 344667865 4599999999877543
No 47
>1ngm_B Transcription factor IIIB BRF1 subunit; TFIIIB, TBP, TAF, protein-DNA complex, transcription/DNA complex; 2.95A {Saccharomyces cerevisiae} SCOP: j.104.1.1
Probab=33.41 E-value=35 Score=20.34 Aligned_cols=21 Identities=24% Similarity=0.468 Sum_probs=16.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhHhHh
Q 048580 32 VSEEEAVKALSLAVANSWKVINEELL 57 (108)
Q Consensus 32 ~s~EeA~~~i~~~ie~~wK~ln~e~l 57 (108)
.|++|+.-+ +.-|..+|++||
T Consensus 41 LteeEv~~K-----~~iW~~~N~dyL 61 (72)
T 1ngm_B 41 LNEEASKLK-----ERIWIGLNADFL 61 (72)
T ss_dssp CCHHHHHHH-----HHHHHHHTTTHH
T ss_pred CCHHHHHHH-----HHHHHHHhHHHH
Confidence 688887532 346999999998
No 48
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=33.41 E-value=17 Score=24.07 Aligned_cols=25 Identities=20% Similarity=0.251 Sum_probs=18.7
Q ss_pred Ccchhhhhh-hcCCCCHHHHHHHHHH
Q 048580 19 SPSAVECYK-NQLGVSEEEAVKALSL 43 (108)
Q Consensus 19 ~~s~v~cYM-ke~g~s~EeA~~~i~~ 43 (108)
.++.+-+|+ +..|+|.++|.+.++.
T Consensus 129 Sg~~v~ayLm~~~~~~~~~A~~~v~~ 154 (183)
T 3f81_A 129 SPTLVIAYLMMRQKMDVKSALSIVRQ 154 (183)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 344466775 5569999999998875
No 49
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=32.82 E-value=18 Score=23.09 Aligned_cols=24 Identities=17% Similarity=0.104 Sum_probs=17.4
Q ss_pred chhhhhhh-cCCCCHHHHHHHHHHH
Q 048580 21 SAVECYKN-QLGVSEEEAVKALSLA 44 (108)
Q Consensus 21 s~v~cYMk-e~g~s~EeA~~~i~~~ 44 (108)
..+-+|+- ..|++.++|.+.+++.
T Consensus 99 ~~~~ayl~~~~~~~~~~a~~~v~~~ 123 (149)
T 1zzw_A 99 TIVIAYLMKHTRMTMTDAYKFVKGK 123 (149)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 44567855 4699999999877553
No 50
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=32.63 E-value=18 Score=22.73 Aligned_cols=25 Identities=16% Similarity=0.442 Sum_probs=19.0
Q ss_pred CcchhhhhhhcC-CCCHHHHHHHHHH
Q 048580 19 SPSAVECYKNQL-GVSEEEAVKALSL 43 (108)
Q Consensus 19 ~~s~v~cYMke~-g~s~EeA~~~i~~ 43 (108)
.+..+-||+... |++.++|++.++.
T Consensus 103 sg~~~~~~l~~~~~~~~~~a~~~~r~ 128 (151)
T 2img_A 103 TGTMLACYLVKERGLAAGDAIAEIRR 128 (151)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 445677886655 9999999988865
No 51
>1ow4_A Pheromone binding protein; ligand 8-anilino-1-naphtalenesulf acid, transport protein; HET: 2AN; 1.60A {Leucophaea maderae} SCOP: a.39.2.1 PDB: 1p28_A 1org_A
Probab=32.35 E-value=11 Score=24.06 Aligned_cols=37 Identities=5% Similarity=0.037 Sum_probs=20.9
Q ss_pred CCCCCCCchHHhhhcCCCcchhhhhhhcCCCCHHHHH
Q 048580 2 LSGGGRVPPQFEQKREHSPSAVECYKNQLGVSEEEAV 38 (108)
Q Consensus 2 ~~~nDi~s~~~E~~rg~~~s~v~cYMke~g~s~EeA~ 38 (108)
++.|+.+.+..|+.+.......+-.++|+|+|+|...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~C~~e~gvs~e~i~ 39 (129)
T 1ow4_A 3 IGINSDPNSSTQSYKDAMGPLVRECMGSVSATEDDFK 39 (129)
T ss_dssp -------CCCCHHHHHHHHHHHHHHTTTSCCCHHHHH
T ss_pred eeeccChhhhHHHHHHHHHHHHHHHHhhcCCCHHHHH
Confidence 3456666665665555555666667899999997644
No 52
>1d0q_A DNA primase; zinc-binding motif, protein, transferase; HET: DNA; 1.71A {Geobacillus stearothermophilus} SCOP: g.41.3.2
Probab=31.69 E-value=36 Score=20.95 Aligned_cols=28 Identities=21% Similarity=0.148 Sum_probs=22.3
Q ss_pred CCCcchhhhhhhcCCCCHHHHHHHHHHH
Q 048580 17 EHSPSAVECYKNQLGVSEEEAVKALSLA 44 (108)
Q Consensus 17 g~~~s~v~cYMke~g~s~EeA~~~i~~~ 44 (108)
|.-.+.|+.+|+-.|+|--||++.+.+.
T Consensus 65 g~gGd~i~fv~~~~~~sf~eA~~~La~~ 92 (103)
T 1d0q_A 65 GAGGNAFTFLMDIEGIPFVEAAKRLAAK 92 (103)
T ss_dssp CCEECHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHhCCCHHHHHHHHHHH
Confidence 4445779999988899999999888654
No 53
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=31.34 E-value=19 Score=22.83 Aligned_cols=24 Identities=21% Similarity=0.241 Sum_probs=17.2
Q ss_pred chhhhhh-hcCCCCHHHHHHHHHHH
Q 048580 21 SAVECYK-NQLGVSEEEAVKALSLA 44 (108)
Q Consensus 21 s~v~cYM-ke~g~s~EeA~~~i~~~ 44 (108)
+.+-+|+ +..|+|.++|.+.++..
T Consensus 97 ~~v~ayLm~~~~~~~~~A~~~v~~~ 121 (145)
T 2nt2_A 97 STVIAYAMKEYGWNLDRAYDYVKER 121 (145)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 3355675 55699999999887653
No 54
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=31.33 E-value=19 Score=22.87 Aligned_cols=24 Identities=29% Similarity=0.308 Sum_probs=17.4
Q ss_pred cchhhhhhh-cCCCCHHHHHHHHHH
Q 048580 20 PSAVECYKN-QLGVSEEEAVKALSL 43 (108)
Q Consensus 20 ~s~v~cYMk-e~g~s~EeA~~~i~~ 43 (108)
+..+-+|+. ..|++.++|.+.++.
T Consensus 104 g~~~~a~l~~~~~~~~~~a~~~v~~ 128 (157)
T 3rgo_A 104 ATMVAAYLIQVHNWSPEEAIEAIAK 128 (157)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 344467754 469999999988865
No 55
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=31.30 E-value=19 Score=23.01 Aligned_cols=24 Identities=17% Similarity=0.202 Sum_probs=17.2
Q ss_pred chhhhhhhc-CCCCHHHHHHHHHHH
Q 048580 21 SAVECYKNQ-LGVSEEEAVKALSLA 44 (108)
Q Consensus 21 s~v~cYMke-~g~s~EeA~~~i~~~ 44 (108)
..+-+|+-. .|++.++|.+.++..
T Consensus 106 ~~~~ayl~~~~~~~~~~a~~~v~~~ 130 (154)
T 2r0b_A 106 AFVIAYIMETFGMKYRDAFAYVQER 130 (154)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 345677654 599999999877653
No 56
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=31.19 E-value=23 Score=21.06 Aligned_cols=18 Identities=22% Similarity=0.458 Sum_probs=14.9
Q ss_pred HHhhhhhhcccCCCCCCCc
Q 048580 74 LSCSADFMYNDAQDRFTHS 92 (108)
Q Consensus 74 ~aR~~~~~Y~~~~Dg~t~~ 92 (108)
..|+..++|. ..|||..|
T Consensus 57 ~~~I~~ILYa-t~~~f~~p 74 (75)
T 3mtu_A 57 LQRIVDILYA-TDEGFVIP 74 (75)
T ss_dssp HHHHHHHHHC-BTTBCSSC
T ss_pred HHHHHHHHhc-cCcCCCCC
Confidence 3567889999 99999876
No 57
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=30.36 E-value=26 Score=23.22 Aligned_cols=25 Identities=16% Similarity=0.104 Sum_probs=18.1
Q ss_pred cchhhhhhh-cCCCCHHHHHHHHHHH
Q 048580 20 PSAVECYKN-QLGVSEEEAVKALSLA 44 (108)
Q Consensus 20 ~s~v~cYMk-e~g~s~EeA~~~i~~~ 44 (108)
+..+-||+. ..|++.++|.+.++..
T Consensus 102 g~~v~ayLm~~~~~~~~~A~~~v~~~ 127 (177)
T 2oud_A 102 ATIVIAYLMKHTRMTMTDAYKFVKGK 127 (177)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 344567855 4699999999887654
No 58
>1xju_A Lysozyme; secreted inactive conformation, hydrolase; 1.07A {Enterobacteria phage P1} SCOP: d.2.1.3
Probab=30.28 E-value=1.2e+02 Score=20.20 Aligned_cols=45 Identities=11% Similarity=0.311 Sum_probs=33.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCH----HHHHHHHHHHhh
Q 048580 31 GVSEEEAVKALSLAVANSWKVINEELLLNPTAIPL----PLLQVIFDLSCS 77 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~----~~~~~~~N~aR~ 77 (108)
.+|+++|.+-++.-|....+.+++. + ...++|. +++.+++|+.-.
T Consensus 43 ~iT~~ea~~ll~~dl~~~~~~v~~~-~-~~v~l~q~q~dALvSfayNvG~g 91 (163)
T 1xju_A 43 RKTDQQIAADWEKNILIAERCINQH-F-RGKDMPDNAFSAMTSAAFNMGCN 91 (163)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHH-S-CGGGSCHHHHHHHHHHHHHHCHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHh-c-CCCCCCHHHHHHHHHHHHhcCcc
Confidence 5899999999999999998888773 3 2123454 577777777643
No 59
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=30.23 E-value=31 Score=25.28 Aligned_cols=80 Identities=10% Similarity=0.077 Sum_probs=46.1
Q ss_pred hhhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHhHhHhcCC---CCCCHHHHHHHHHHH-hh-hhhhc-ccCCCCCCCchh
Q 048580 22 AVECYKNQL-GVSEEEAVKALSLAVANSWKVINEELLLNP---TAIPLPLLQVIFDLS-CS-ADFMY-NDAQDRFTHSTM 94 (108)
Q Consensus 22 ~v~cYMke~-g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~---~~~p~~~~~~~~N~a-R~-~~~~Y-~~~~Dg~t~~~~ 94 (108)
+-+.+++.+ +.|.+|+.+.+.+.++.+.+.=.+-.+ .+ ...+...+..+...+ .. ++.++ . +.-|...|..
T Consensus 103 ~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~-~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~-DT~G~~~P~~ 180 (293)
T 3ewb_X 103 TSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQF-SPEDATRSDRAFLIEAVQTAIDAGATVINIP-DTVGYTNPTE 180 (293)
T ss_dssp CSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEE-EEETGGGSCHHHHHHHHHHHHHTTCCEEEEE-CSSSCCCHHH
T ss_pred CcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEE-EeccCCCCCHHHHHHHHHHHHHcCCCEEEec-CCCCCCCHHH
Confidence 345667777 999999999999999877653211122 11 123333222222211 11 23333 5 6778888877
Q ss_pred HHHHHHhhh
Q 048580 95 MKDQVDLVL 103 (108)
Q Consensus 95 ~k~~I~sll 103 (108)
+.+.|+.+.
T Consensus 181 v~~lv~~l~ 189 (293)
T 3ewb_X 181 FGQLFQDLR 189 (293)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776653
No 60
>3hdf_A Lysozyme; antimicrobial, bacteriolytic enzyme, glycosid hydrolase, late protein; 1.70A {Enterobacteria phage P21}
Probab=30.07 E-value=1.1e+02 Score=19.73 Aligned_cols=40 Identities=18% Similarity=0.252 Sum_probs=28.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCHHHHHHHHH
Q 048580 31 GVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIFD 73 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~N 73 (108)
.+|+++|.+-++.-+...-+.+++. + . .++|..-.+..++
T Consensus 40 ~iT~~ea~~ll~~dl~~~~~~v~~~-v-~-~~l~q~q~dALvS 79 (140)
T 3hdf_A 40 TYTKAECKALLNKDLATVARQINPY-I-K-VDIPETMRGALYS 79 (140)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHGGG-C-C-SCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHh-c-c-ccCCHHHHHHHHH
Confidence 5899999999999999888888763 3 2 3566654444333
No 61
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=29.42 E-value=30 Score=22.38 Aligned_cols=24 Identities=21% Similarity=0.268 Sum_probs=17.2
Q ss_pred chhhhhh-hcCCCCHHHHHHHHHHH
Q 048580 21 SAVECYK-NQLGVSEEEAVKALSLA 44 (108)
Q Consensus 21 s~v~cYM-ke~g~s~EeA~~~i~~~ 44 (108)
+.+-+|+ +..|++.++|.+.+++.
T Consensus 105 ~~~~ayLm~~~~~~~~~A~~~v~~~ 129 (164)
T 2hcm_A 105 AVCTAYLMRHRGHSLDRAFQMVKSA 129 (164)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 3455674 55699999999877653
No 62
>4e97_A Lysozyme; hydrolase, alkylation with 2-mercaptoethanol; 1.30A {Enterobacteria phage T4} PDB: 4ekp_A 4ekq_A* 4ekr_A 4eks_A
Probab=29.25 E-value=43 Score=22.77 Aligned_cols=46 Identities=17% Similarity=0.300 Sum_probs=31.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhHhHhcCC--CCCCH----HHHHHHHHHHh
Q 048580 31 GVSEEEAVKALSLAVANSWKVINEELLLNP--TAIPL----PLLQVIFDLSC 76 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~--~~~p~----~~~~~~~N~aR 76 (108)
.+|+++|.+-+..-|..+-+.+++.+-..+ ..+|. +++..++|+..
T Consensus 80 ~it~~~a~~ll~~Dl~~~~~~~~~~~~~~~~~~~l~~~~~~ALvsm~FNlG~ 131 (187)
T 4e97_A 80 VITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRCAAINHVFQMGV 131 (187)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHSCHHHHHHHHHHHHHHCH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHheeeeeccCC
Confidence 389999999999999888887765432000 12454 46677777663
No 63
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=29.15 E-value=28 Score=22.71 Aligned_cols=24 Identities=17% Similarity=0.194 Sum_probs=17.1
Q ss_pred chhhhhh-hcCCCCHHHHHHHHHHH
Q 048580 21 SAVECYK-NQLGVSEEEAVKALSLA 44 (108)
Q Consensus 21 s~v~cYM-ke~g~s~EeA~~~i~~~ 44 (108)
..+-+|+ +..|+|.++|.+.+++.
T Consensus 99 ~~~~ayLm~~~~~~~~~A~~~v~~~ 123 (165)
T 1wrm_A 99 TLVIAYIMTVTDFGWEDALHTVRAG 123 (165)
T ss_dssp HHHHHHHHHTSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3346675 55699999999887653
No 64
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=28.88 E-value=27 Score=23.00 Aligned_cols=26 Identities=12% Similarity=-0.064 Sum_probs=18.3
Q ss_pred Ccchhhhhh-hcCCCC-----HHHHHHHHHHH
Q 048580 19 SPSAVECYK-NQLGVS-----EEEAVKALSLA 44 (108)
Q Consensus 19 ~~s~v~cYM-ke~g~s-----~EeA~~~i~~~ 44 (108)
.++.+-||+ +..+.+ .++|++++++.
T Consensus 122 Sg~~v~aylm~~~~~~~~~v~~~~A~~~vr~~ 153 (176)
T 3cm3_A 122 SGAMILAYLMSKNKESLPMLYFLYVYHSMRDL 153 (176)
T ss_dssp HHHHHHHHHHHHCCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCccccHHHHHHHHHHH
Confidence 345567775 456888 88988887654
No 65
>1xjt_A Lysozyme; open conformation, hydrolase; HET: CIT; 1.75A {Enterobacteria phage P1} SCOP: d.2.1.3
Probab=28.44 E-value=1.3e+02 Score=20.73 Aligned_cols=44 Identities=11% Similarity=0.311 Sum_probs=32.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCH----HHHHHHHHHHh
Q 048580 31 GVSEEEAVKALSLAVANSWKVINEELLLNPTAIPL----PLLQVIFDLSC 76 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~----~~~~~~~N~aR 76 (108)
.+|++||.+-++.-+....+.+++. + ...++|. +++.+++|+.-
T Consensus 71 ~iT~~ea~~lL~~Dl~~~~~~v~~~-v-~~v~l~q~q~dALvSfayNvG~ 118 (191)
T 1xjt_A 71 RKTDQQIAADWEKNILIAERCINQH-F-RGKDMPDNAFSAMTSAAFNMGC 118 (191)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHH-S-CGGGSCHHHHHHHHHHHHHHCH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHh-c-CCCCCCHHHHHHHHHHHHhcCc
Confidence 5899999999999999998888873 3 2124554 46777777764
No 66
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=28.20 E-value=29 Score=23.64 Aligned_cols=26 Identities=23% Similarity=0.163 Sum_probs=19.7
Q ss_pred Ccchhhhhhhc--CCCCHHHHHHHHHHH
Q 048580 19 SPSAVECYKNQ--LGVSEEEAVKALSLA 44 (108)
Q Consensus 19 ~~s~v~cYMke--~g~s~EeA~~~i~~~ 44 (108)
.+..+-||+.. .|++.++|++.++..
T Consensus 147 Tg~~~a~~L~~~~~g~~~~~a~~~vr~~ 174 (212)
T 1fpz_A 147 SCLVAACLLLYLSDTISPEQAIDSLRDL 174 (212)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHh
Confidence 44556788776 499999999888654
No 67
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=27.88 E-value=29 Score=25.40 Aligned_cols=26 Identities=27% Similarity=0.164 Sum_probs=19.3
Q ss_pred Ccchhhhhhhc-CCCCHHHHHHHHHHH
Q 048580 19 SPSAVECYKNQ-LGVSEEEAVKALSLA 44 (108)
Q Consensus 19 ~~s~v~cYMke-~g~s~EeA~~~i~~~ 44 (108)
.++.+-+|+.. .|+|.++|++.++..
T Consensus 120 S~tvv~ayLm~~~g~s~~~A~~~v~~~ 146 (294)
T 3nme_A 120 APAVALTYMFWVQGYKLMEAHKLLMSK 146 (294)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHh
Confidence 34557788655 599999999988653
No 68
>4evx_A Putative phage endolysin; structural genomics, PSI-biology, program for the characteri secreted effector proteins, pcsep; HET: MLY MSE; 1.70A {Salmonella enterica subsp}
Probab=27.66 E-value=1.1e+02 Score=18.80 Aligned_cols=42 Identities=12% Similarity=0.090 Sum_probs=29.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCHH----HHHHHHHHH
Q 048580 31 GVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLP----LLQVIFDLS 75 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~----~~~~~~N~a 75 (108)
.+|+++|.+-++.-+....+.+++. + . .+++.. ++.+++|+.
T Consensus 49 ~iT~~ea~~ll~~dl~~~~~~v~~~-v-~-v~l~q~q~dALvSf~yNvG 94 (106)
T 4evx_A 49 FITPDQAEAFLLDDLNSCDILLQNC-L-P-ELNDRFQRETLIALMFSIG 94 (106)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHHHHH-S-T-TCCCHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHh-C-C-CCCCHHHHHHHHHHhHhCC
Confidence 5899999999999999988888763 3 2 346664 444444443
No 69
>2rmh_A Urocortin-3; CRF ligand, sauvagine, astressin2B, urotensins, CRF receptors, amidation, hormone, secreted; NMR {Synthetic}
Probab=26.91 E-value=52 Score=17.23 Aligned_cols=16 Identities=13% Similarity=0.636 Sum_probs=14.6
Q ss_pred CCCHHHHHHHHHHHhh
Q 048580 62 AIPLPLLQVIFDLSCS 77 (108)
Q Consensus 62 ~~p~~~~~~~~N~aR~ 77 (108)
.+|..+++..+++||.
T Consensus 6 Dvp~~ll~~l~e~Ara 21 (38)
T 2rmh_A 6 DVPTNIMNLLFNIAKA 21 (38)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred eccHHHHHHHHHHHHH
Confidence 5899999999999996
No 70
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=26.31 E-value=38 Score=21.20 Aligned_cols=25 Identities=16% Similarity=0.453 Sum_probs=18.3
Q ss_pred Ccchhhhhhh-cCCCCHHHHHHHHHH
Q 048580 19 SPSAVECYKN-QLGVSEEEAVKALSL 43 (108)
Q Consensus 19 ~~s~v~cYMk-e~g~s~EeA~~~i~~ 43 (108)
.+..+.||+. ..|++.++|++.++.
T Consensus 102 sg~~~a~~l~~~~~~~~~~a~~~vr~ 127 (150)
T 4erc_A 102 TGTMLACYLVKERGLAAGDAIAEIRR 127 (150)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3445678754 469999999988864
No 71
>1esx_A VPR protein; helix, amphipatic, turn, viral protein; NMR {Synthetic} SCOP: j.11.1.1 PDB: 1m8l_A 1vpc_A 1x9v_A
Probab=26.14 E-value=69 Score=20.13 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=24.0
Q ss_pred HHHHHHhHhHhcCCCCCCHHHHHHHHHHHhhhhhhcccCCCCCC
Q 048580 47 NSWKVINEELLLNPTAIPLPLLQVIFDLSCSADFMYNDAQDRFT 90 (108)
Q Consensus 47 ~~wK~ln~e~l~~~~~~p~~~~~~~~N~aR~~~~~Y~~~~Dg~t 90 (108)
+.-.+||+|-+ + .+|++.+..++|-+ |.-+||-++
T Consensus 21 e~LeELk~EAv-r--HFpr~~L~~lgq~i------ye~~Gdtw~ 55 (96)
T 1esx_A 21 ELLEELKNEAV-R--HFPRIWLHSLGQHI------YETYGDTWT 55 (96)
T ss_dssp HHHHHHHHHHH-H--STTTCSHHHHHHHH------HHHSSSSSS
T ss_pred HHHHHHHHHHH-H--cCCHHHHHHHHHHH------HHhhcCcHH
Confidence 34458899988 4 49999988877643 433667555
No 72
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=25.41 E-value=27 Score=24.36 Aligned_cols=24 Identities=13% Similarity=0.065 Sum_probs=18.2
Q ss_pred chhhhhhhc-CCCCHHHHHHHHHHH
Q 048580 21 SAVECYKNQ-LGVSEEEAVKALSLA 44 (108)
Q Consensus 21 s~v~cYMke-~g~s~EeA~~~i~~~ 44 (108)
+.+-+|+.. .|++.++|++.+++.
T Consensus 99 tvv~AYLm~~~g~s~~eAl~~vr~~ 123 (211)
T 2g6z_A 99 TICMAYLMKTKQFRLKEAFDYIKQR 123 (211)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 446678554 599999999988764
No 73
>1nkz_B Light-harvesting protein B-800/850, beta chain; light harvesting complex II, trans-membrane helices, rhodopi glucoside; HET: CXM RG1 BOG BCL; 2.00A {Rhodoblastus acidophilus} SCOP: f.3.1.1 PDB: 1kzu_B* 2fkw_B* 1ijd_B*
Probab=24.92 E-value=36 Score=18.14 Aligned_cols=16 Identities=19% Similarity=0.256 Sum_probs=10.4
Q ss_pred CCCHHHHHHHHHHHHHH
Q 048580 31 GVSEEEAVKALSLAVAN 47 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie~ 47 (108)
|.|+|||.+ +.++.-+
T Consensus 2 gLT~~EA~E-fH~~~~~ 17 (41)
T 1nkz_B 2 TLTAEQSEE-LHKYVID 17 (41)
T ss_dssp CCCHHHHHH-HHHHHHH
T ss_pred CCCHHHHHH-HHHHHHH
Confidence 789999874 4444433
No 74
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=24.86 E-value=29 Score=23.34 Aligned_cols=24 Identities=13% Similarity=-0.053 Sum_probs=17.5
Q ss_pred chhhhhh-hcCCCCHHHHHHHHHHH
Q 048580 21 SAVECYK-NQLGVSEEEAVKALSLA 44 (108)
Q Consensus 21 s~v~cYM-ke~g~s~EeA~~~i~~~ 44 (108)
+.+-+|+ +..|+|.++|.+.++..
T Consensus 113 ~vv~ayLm~~~~~s~~~A~~~v~~~ 137 (188)
T 2esb_A 113 ALCLAYLMKYHAMSLLDAHTWTKSC 137 (188)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3455775 55799999999887653
No 75
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=24.63 E-value=36 Score=25.97 Aligned_cols=81 Identities=7% Similarity=0.013 Sum_probs=46.4
Q ss_pred chhhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHhHhHhcCC---CCCCHHHHHHHHHHHh--hhhhh-cccCCCCCCCch
Q 048580 21 SAVECYKNQL-GVSEEEAVKALSLAVANSWKVINEELLLNP---TAIPLPLLQVIFDLSC--SADFM-YNDAQDRFTHST 93 (108)
Q Consensus 21 s~v~cYMke~-g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~---~~~p~~~~~~~~N~aR--~~~~~-Y~~~~Dg~t~~~ 93 (108)
++-+.+++.+ +.|.||+.+.+.+.++.+.+.--.-.+ .+ +..+..++-.+...+. .++.+ .. +.-|+..|.
T Consensus 109 ~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~-~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~-DT~G~~~P~ 186 (370)
T 3rmj_A 109 ATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEF-SCEDALRSEIDFLAEICGAVIEAGATTINIP-DTVGYSIPY 186 (370)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEE-EEETGGGSCHHHHHHHHHHHHHHTCCEEEEE-CSSSCCCHH
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEE-ecCCCCccCHHHHHHHHHHHHHcCCCEEEec-CccCCcCHH
Confidence 3446677777 999999999999999877642111112 11 1233332222222111 12233 45 778999997
Q ss_pred hHHHHHHhhh
Q 048580 94 MMKDQVDLVL 103 (108)
Q Consensus 94 ~~k~~I~sll 103 (108)
.+.+.|+.|.
T Consensus 187 ~~~~lv~~l~ 196 (370)
T 3rmj_A 187 KTEEFFRELI 196 (370)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777777654
No 76
>2dod_A Transcription elongation regulator 1; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=24.60 E-value=60 Score=19.53 Aligned_cols=43 Identities=16% Similarity=0.282 Sum_probs=27.9
Q ss_pred CCCHHHHHHHHHHHHHHH-------HHHHhHhHhcCCC--CCCHHHHHHHHH
Q 048580 31 GVSEEEAVKALSLAVANS-------WKVINEELLLNPT--AIPLPLLQVIFD 73 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie~~-------wK~ln~e~l~~~~--~~p~~~~~~~~N 73 (108)
-.|.|||.+.+++|+.+. |..........|. .+|..=++-+||
T Consensus 13 ~~t~eea~~~Fk~LL~e~~V~p~~tWe~~~~~i~~DpRY~aL~~~eRK~~F~ 64 (82)
T 2dod_A 13 IVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFD 64 (82)
T ss_dssp SCCHHHHHHHHHHHHHHTTCCSSSCHHHHHHHHHTCSGGGTSCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHcCcCCCCCHHHHHHHHccCCccccCCHHHHHHHHH
Confidence 479999999999999874 7666655551222 355444444444
No 77
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=24.51 E-value=83 Score=17.71 Aligned_cols=45 Identities=11% Similarity=0.079 Sum_probs=28.8
Q ss_pred CCCHHHHHHHHHHHHH----HHHHHHhHhHhcCCCCCCHHHHHHHHHHHhh
Q 048580 31 GVSEEEAVKALSLAVA----NSWKVINEELLLNPTAIPLPLLQVIFDLSCS 77 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie----~~wK~ln~e~l~~~~~~p~~~~~~~~N~aR~ 77 (108)
.-|+||=.. |.++|+ ..|+.|-+.+. -...-+..|+++.-|+-|.
T Consensus 13 ~WT~eED~~-L~~~V~~~G~~~W~~Ia~~~~-~~~Rt~~qcr~Rw~nl~k~ 61 (64)
T 3sjm_A 13 KWTVEESEW-VKAGVQKYGEGNWAAISKNYP-FVNRTAVMIKDRWRTMKRL 61 (64)
T ss_dssp CCCHHHHHH-HHHHHHHHCTTCHHHHHHHSC-CSSCCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHH-HHHHHHccCCCchHHHHhhcC-CCCCCHHHHHHHHHHHhcc
Confidence 456555332 333433 35999987653 2345788999999998764
No 78
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=24.17 E-value=72 Score=19.28 Aligned_cols=20 Identities=20% Similarity=0.529 Sum_probs=16.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 048580 31 GVSEEEAVKALSLAVANSWKV 51 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie~~wK~ 51 (108)
|.+.+ .++.|.+++++.|.+
T Consensus 54 g~~k~-dKe~i~eiLqE~we~ 73 (81)
T 1ghh_A 54 GATKE-DKQRISEILQETWES 73 (81)
T ss_dssp SCCHH-HHHHHHHHHHHHHHT
T ss_pred CCChh-HHHHHHHHHHHHHhC
Confidence 45565 799999999999965
No 79
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=23.92 E-value=41 Score=21.24 Aligned_cols=23 Identities=22% Similarity=0.121 Sum_probs=17.1
Q ss_pred chhhhh-hhcCCCCHHHHHHHHHH
Q 048580 21 SAVECY-KNQLGVSEEEAVKALSL 43 (108)
Q Consensus 21 s~v~cY-Mke~g~s~EeA~~~i~~ 43 (108)
+.+-+| |+..|++.++|.+.++.
T Consensus 101 ~~~~ayl~~~~~~~~~~a~~~v~~ 124 (151)
T 2e0t_A 101 TLVLAYLMLYHHLTLVEAIKKVKD 124 (151)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHH
Confidence 345677 45669999999988765
No 80
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=23.85 E-value=59 Score=20.97 Aligned_cols=23 Identities=13% Similarity=0.144 Sum_probs=17.9
Q ss_pred hhhhhhhcCCCCHHHHHHHHHHH
Q 048580 22 AVECYKNQLGVSEEEAVKALSLA 44 (108)
Q Consensus 22 ~v~cYMke~g~s~EeA~~~i~~~ 44 (108)
.+.||....|++.++|++.++..
T Consensus 118 l~al~l~~~g~~~~~a~~~~~~~ 140 (156)
T 2f46_A 118 LWGFRRAAEGMPVDEIIRRAQAA 140 (156)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHHHHHHHHc
Confidence 34577677899999999988754
No 81
>2anv_A Lysozyme; direct methods, lanthinide binding sites, hydrolase; 1.04A {Enterobacteria phage P22} PDB: 2anx_A
Probab=23.77 E-value=1.5e+02 Score=19.12 Aligned_cols=37 Identities=11% Similarity=0.109 Sum_probs=27.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCHHHHHH
Q 048580 31 GVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQV 70 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~ 70 (108)
.+|+++|..-++.-+...-+.+++ ++ +-++|..-.+.
T Consensus 50 ~iT~~ea~~ll~~dl~~~~~~v~~-~~--~v~l~q~q~dA 86 (146)
T 2anv_A 50 TITAEKSSELLKEDLQWVEDAISS-LV--RVPLNQNQYDA 86 (146)
T ss_dssp BCCHHHHHHHHHHHTHHHHHHHHH-HC--CSCCCHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHH-hC--CCCCCHHHHHH
Confidence 479999999999999998888887 33 23466543333
No 82
>2yzt_A Putative uncharacterized protein TTHA1756; uncharacterized conserved protein, structural genomics, UNKN function, NPPSFA; 1.80A {Thermus thermophilus}
Probab=23.39 E-value=50 Score=18.67 Aligned_cols=17 Identities=35% Similarity=0.282 Sum_probs=14.7
Q ss_pred CCCHHHHHHHHHHHHHH
Q 048580 31 GVSEEEAVKALSLAVAN 47 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie~ 47 (108)
|-|.|||++.+++.++.
T Consensus 30 G~T~eEa~~~~~eAi~~ 46 (67)
T 2yzt_A 30 AQSFEELLRRLQEAIAV 46 (67)
T ss_dssp ESSHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHH
Confidence 78999999999888874
No 83
>1b4u_A LIGA, LIGB, protocatechuate 4,5-dioxygenase; extradiol type dioxygenase, non-heme iron protein; HET: DHB; 2.20A {Sphingomonas paucimobilis} SCOP: a.88.1.1 PDB: 1bou_A
Probab=23.25 E-value=57 Score=21.82 Aligned_cols=28 Identities=11% Similarity=0.328 Sum_probs=20.5
Q ss_pred hhhhhcCCCCHHHHHHHHHHHHHHHHHHHhHh
Q 048580 24 ECYKNQLGVSEEEAVKALSLAVANSWKVINEE 55 (108)
Q Consensus 24 ~cYMke~g~s~EeA~~~i~~~ie~~wK~ln~e 55 (108)
+.||.++|.|+||-. .+.+.-|..|...
T Consensus 58 eA~l~~~gLTeEEr~----AV~~rD~~~L~~l 85 (139)
T 1b4u_A 58 SAYLDEWNLTPAAKA----AVLARDYNAMIDE 85 (139)
T ss_dssp HHHHHTTTCCHHHHH----HHHHTCHHHHHHT
T ss_pred HHHHHHcCCCHHHHH----HHHcCCHHHHHHc
Confidence 689999999998843 4555667766653
No 84
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=23.14 E-value=27 Score=26.37 Aligned_cols=29 Identities=7% Similarity=-0.087 Sum_probs=21.3
Q ss_pred cCCCcchhhhh--hhcCCCCHHHHHHHHHHH
Q 048580 16 REHSPSAVECY--KNQLGVSEEEAVKALSLA 44 (108)
Q Consensus 16 rg~~~s~v~cY--Mke~g~s~EeA~~~i~~~ 44 (108)
+|..+..+-|| |++.+++.+|+++.++.+
T Consensus 224 ~GRTgt~ma~y~ll~~~~vs~eeii~r~~~l 254 (314)
T 3mmj_A 224 VGRTTAFMVMTDMLKNPSVSLKDILYRQHEI 254 (314)
T ss_dssp SHHHHHHHHHHHHHHCTTSCHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHCCCCCHHHHHHHHHHh
Confidence 44455667787 466699999999888655
No 85
>3hde_A Lysozyme; antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase, late protein; 1.95A {Enterobacteria phage P21}
Probab=22.96 E-value=1.7e+02 Score=19.46 Aligned_cols=42 Identities=19% Similarity=0.309 Sum_probs=29.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCHH----HHHHHHHHH
Q 048580 31 GVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLP----LLQVIFDLS 75 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~----~~~~~~N~a 75 (108)
.+|+++|.+-++.-+...-+.+++. + . .++|+. ++.+++|+.
T Consensus 65 ~iT~~ea~~lL~~Dl~~~e~~v~~~-v-~-v~L~q~q~dALvSfafNvG 110 (165)
T 3hde_A 65 TYTKAECKALLNKDLATVARQINPY-I-K-VDIPETMRGALYSFVYNVG 110 (165)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHGGG-C-C-SCCCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHh-c-C-CCCCHHHHHHHHHHHHhcC
Confidence 5899999999999999888888763 3 2 345554 444455543
No 86
>4aqn_A Pesticin; toxin, bacteriocin, colicin, three domains, muramidase; 1.98A {Yersinia pestis} PDB: 4epf_A 4arm_B 4arl_A 4arm_A 4arq_B 4arp_A 4arq_A
Probab=22.83 E-value=1.1e+02 Score=23.60 Aligned_cols=55 Identities=15% Similarity=0.190 Sum_probs=33.6
Q ss_pred hhhcC--CCCHHHHH-------HHHHHHHHHHHHHHhHh-HhcCCCCCCHHHHHHHHHHHhhhhhhcccCCCCCC
Q 048580 26 YKNQL--GVSEEEAV-------KALSLAVANSWKVINEE-LLLNPTAIPLPLLQVIFDLSCSADFMYNDAQDRFT 90 (108)
Q Consensus 26 YMke~--g~s~EeA~-------~~i~~~ie~~wK~ln~e-~l~~~~~~p~~~~~~~~N~aR~~~~~Y~~~~Dg~t 90 (108)
+++++ .+|.+||. .+....+...|..-|.. .| ..+|.++..++ +.+.|+ +|.+++
T Consensus 243 ~L~~~pLtIT~dEA~~L~~av~~~y~~kl~~~Yd~an~g~~F---~dLPpe~QTVL------vSL~YQ-yGs~Ls 307 (357)
T 4aqn_A 243 KVRTAPLTLSDNEAHLLSNIYIDKFSHKIEGLFNDANIGLRF---SDLPLRTRTAL------VSIGYQ-KGFKLS 307 (357)
T ss_dssp HHHHSCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCG---GGSCHHHHHHH------HHHHHH-HCSCHH
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCh---hhCCHHHhhHh------hhhhhh-cCCCcc
Confidence 34555 47889984 34445555566554311 12 35899998885 556799 888753
No 87
>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1
Probab=22.63 E-value=70 Score=20.34 Aligned_cols=20 Identities=30% Similarity=0.350 Sum_probs=11.3
Q ss_pred hhhhhhcCCCCHHHHHHHHH
Q 048580 23 VECYKNQLGVSEEEAVKALS 42 (108)
Q Consensus 23 v~cYMke~g~s~EeA~~~i~ 42 (108)
|.--|..-|+|+++|+..+.
T Consensus 43 Vk~L~EmtG~seeeAr~AL~ 62 (104)
T 1wj7_A 43 VKQLIDITGKNQDECVIALH 62 (104)
T ss_dssp HHHHHHHTCCCHHHHHHHHH
T ss_pred HHHHHHhhCCCHHHHHHHHH
Confidence 44344444777777776543
No 88
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=22.60 E-value=95 Score=16.41 Aligned_cols=29 Identities=10% Similarity=0.019 Sum_probs=20.9
Q ss_pred HHHHHHhHhHhcCCCCCCHHHHHHHHHHHh
Q 048580 47 NSWKVINEELLLNPTAIPLPLLQVIFDLSC 76 (108)
Q Consensus 47 ~~wK~ln~e~l~~~~~~p~~~~~~~~N~aR 76 (108)
..|..|-+.+- -...-+..|+++..|+.|
T Consensus 23 ~~W~~Ia~~~~-~~~Rt~~qcr~Rw~~~~k 51 (53)
T 1w0t_A 23 GNWSKILLHYK-FNNRTSVMLKDRWRTMKK 51 (53)
T ss_dssp TCHHHHHHHSC-CSSCCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHcC-CCCCCHHHHHHHHHHHHc
Confidence 47998876532 114578899999999876
No 89
>3ig9_A SOC small outer capsid protein; alpha/beta structure, viral protein; 1.90A {Enterobacteria phage RB69} PDB: 3ige_A
Probab=22.20 E-value=28 Score=20.97 Aligned_cols=16 Identities=25% Similarity=0.783 Sum_probs=13.1
Q ss_pred HHHHHHhHhHhcCCCCC
Q 048580 47 NSWKVINEELLLNPTAI 63 (108)
Q Consensus 47 ~~wK~ln~e~l~~~~~~ 63 (108)
..|+..|++.+ .++++
T Consensus 61 ~~Wit~Ne~mf-~~t~~ 76 (78)
T 3ig9_A 61 ADWRTKNAAMF-TPTPV 76 (78)
T ss_dssp HHHHHHHHTTT-CCEEC
T ss_pred hhHhhcCcccc-ccccC
Confidence 67999999999 76654
No 90
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=22.17 E-value=87 Score=23.74 Aligned_cols=77 Identities=9% Similarity=-0.032 Sum_probs=40.6
Q ss_pred hhhhhcC-CCCHHHHHHHHHHHHHHHHHHH--hHhHhcCCCCCCHHHHHHHHHHHhh----hhhh-cccCCCCCCCchhH
Q 048580 24 ECYKNQL-GVSEEEAVKALSLAVANSWKVI--NEELLLNPTAIPLPLLQVIFDLSCS----ADFM-YNDAQDRFTHSTMM 95 (108)
Q Consensus 24 ~cYMke~-g~s~EeA~~~i~~~ie~~wK~l--n~e~l~~~~~~p~~~~~~~~N~aR~----~~~~-Y~~~~Dg~t~~~~~ 95 (108)
+.+++ + +.|.+|+.+.+...++.+.+.= -+-.+ .....++.=.+.++.+++. ++.+ .. +.-|+..|..+
T Consensus 99 ~~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~-~~ed~~~~~~~~~~~~~~~~~~~a~~i~l~-DT~G~~~P~~~ 175 (382)
T 2ztj_A 99 KYLRA-PHGRDIPRIIEEAKEVIAYIREAAPHVEVRF-SAEDTFRSEEQDLLAVYEAVAPYVDRVGLA-DTVGVATPRQV 175 (382)
T ss_dssp --------CCCHHHHHHHHHHHHHHHHHHCTTSEEEE-EETTTTTSCHHHHHHHHHHHGGGCSEEEEE-ETTSCCCHHHH
T ss_pred HHHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCEEEEE-EEEeCCCCCHHHHHHHHHHHHHhcCEEEec-CCCCCCCHHHH
Confidence 45566 5 8999999999999998776532 12222 2222222212222222222 2333 35 67899899777
Q ss_pred HHHHHhhh
Q 048580 96 KDQVDLVL 103 (108)
Q Consensus 96 k~~I~sll 103 (108)
.+.|+.|.
T Consensus 176 ~~lv~~l~ 183 (382)
T 2ztj_A 176 YALVREVR 183 (382)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776653
No 91
>1ceu_A Protein (HIV-1 regulatory protein N-terminal domain VPR); helical domain, amphipaticity, viral protein; NMR {Synthetic} SCOP: j.11.1.1 PDB: 1fi0_A
Probab=22.15 E-value=1.1e+02 Score=16.94 Aligned_cols=24 Identities=13% Similarity=0.122 Sum_probs=17.7
Q ss_pred HHHHHhHhHhcCCCCCCHHHHHHHHHH
Q 048580 48 SWKVINEELLLNPTAIPLPLLQVIFDL 74 (108)
Q Consensus 48 ~wK~ln~e~l~~~~~~p~~~~~~~~N~ 74 (108)
.-.+|++|-+ + .+|++++....|.
T Consensus 22 ~LeElk~EAv-r--HFpr~~L~~lgqy 45 (51)
T 1ceu_A 22 LLEELKNEAV-R--HFPRIWLHSLGQH 45 (51)
T ss_dssp HHHHHHHHTT-T--SCHHHHHHHHHHH
T ss_pred HHHHHHHHHH-H--hCCHHHHHHHHHH
Confidence 3457888887 4 5999998876654
No 92
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=21.77 E-value=50 Score=22.15 Aligned_cols=24 Identities=17% Similarity=-0.031 Sum_probs=17.0
Q ss_pred chhhhhhh-cCCCCHHHHHHHHHHH
Q 048580 21 SAVECYKN-QLGVSEEEAVKALSLA 44 (108)
Q Consensus 21 s~v~cYMk-e~g~s~EeA~~~i~~~ 44 (108)
+.+-+|+. ..|++.++|++.++..
T Consensus 119 tvv~ayLm~~~~~s~~~A~~~v~~~ 143 (190)
T 2wgp_A 119 TLCIAYLMKFHNVCLLEAYNWVKAR 143 (190)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 34567754 4599999999877553
No 93
>1n13_B PVLARGDC, pyruvoyl-dependent arginine decarboxylase alpha chain; pyruvoyl group, pyruvate, agmatine, lyase; 1.40A {Methanocaldococcus jannaschii} SCOP: d.155.1.2 PDB: 1mt1_B 2qqd_B 2qqc_B
Probab=21.58 E-value=49 Score=21.29 Aligned_cols=27 Identities=19% Similarity=0.182 Sum_probs=20.3
Q ss_pred hhhhcC-CC-CHHHHHHHHHHHHHHHHHH
Q 048580 25 CYKNQL-GV-SEEEAVKALSLAVANSWKV 51 (108)
Q Consensus 25 cYMke~-g~-s~EeA~~~i~~~ie~~wK~ 51 (108)
-|.-|| |. +.|+|.+.+.+|++...+.
T Consensus 53 G~i~E~~g~~~~eeae~~a~~ml~~~~~~ 81 (113)
T 1n13_B 53 GLIMEYEGKCSKKEAEKTVREMAKIGFEM 81 (113)
T ss_dssp BEEEEEEESSCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeecCCChHHHHHHHHHHHHHHHHH
Confidence 355565 64 5899999999999987654
No 94
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=21.33 E-value=49 Score=21.22 Aligned_cols=23 Identities=17% Similarity=0.336 Sum_probs=16.8
Q ss_pred chhhhhh-hcCCCCHHHHHHHHHH
Q 048580 21 SAVECYK-NQLGVSEEEAVKALSL 43 (108)
Q Consensus 21 s~v~cYM-ke~g~s~EeA~~~i~~ 43 (108)
+.+-+|+ +..|++.++|.+.++.
T Consensus 100 ~~~~aylm~~~~~~~~~a~~~v~~ 123 (160)
T 1yz4_A 100 TIVTAYVMTVTGLGWRDVLEAIKA 123 (160)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3456776 5569999999987764
No 95
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=21.31 E-value=29 Score=26.17 Aligned_cols=26 Identities=12% Similarity=0.387 Sum_probs=20.6
Q ss_pred Ccchhhhhhhc-CCCCHHHHHHHHHHH
Q 048580 19 SPSAVECYKNQ-LGVSEEEAVKALSLA 44 (108)
Q Consensus 19 ~~s~v~cYMke-~g~s~EeA~~~i~~~ 44 (108)
.+..+-||+.. .|+|.++|++.++..
T Consensus 283 TGtvvaayLm~~~g~s~~eAl~~vr~~ 309 (348)
T 1ohe_A 283 TGTLIACYIMKHYRMTAAETIAWVRIC 309 (348)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 45667899877 599999999888653
No 96
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=20.91 E-value=36 Score=26.03 Aligned_cols=28 Identities=18% Similarity=0.017 Sum_probs=21.8
Q ss_pred CCCcchhhhhhhcCCC--CHHHHHHHHHHH
Q 048580 17 EHSPSAVECYKNQLGV--SEEEAVKALSLA 44 (108)
Q Consensus 17 g~~~s~v~cYMke~g~--s~EeA~~~i~~~ 44 (108)
|..+..|.|||-..|. +.++|++.++..
T Consensus 127 GRtg~~ia~~Li~~~~~~~~~eAl~~~~~~ 156 (361)
T 3n0a_A 127 AASSILVGAMFIFCNLYSTPGPAVRLLYAK 156 (361)
T ss_dssp HHHHHHHHHHHHHTTSCSSHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhcCCCCHHHHHHHHHHh
Confidence 3456778999988865 899999888753
No 97
>1lgh_B LH II, B800/850, light harvesting complex II; bacteriochlorophyll, dexter energy transfer, foerster exciton transfer mechanism; HET: BCL LYC DET HTO; 2.40A {Phaeospirillum molischianum} SCOP: f.3.1.1
Probab=20.79 E-value=46 Score=18.05 Aligned_cols=17 Identities=29% Similarity=0.489 Sum_probs=11.3
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 048580 31 GVSEEEAVKALSLAVANS 48 (108)
Q Consensus 31 g~s~EeA~~~i~~~ie~~ 48 (108)
|.|+|||.+ +.++.-+.
T Consensus 7 GLT~~EA~E-fH~~~~~~ 23 (45)
T 1lgh_B 7 GLTEEEAIA-VHDQFKTT 23 (45)
T ss_dssp SCCHHHHHH-HHHHHHHH
T ss_pred CCCHHHHHH-HHHHHHHH
Confidence 899999974 55544433
No 98
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=20.65 E-value=1.7e+02 Score=21.78 Aligned_cols=47 Identities=13% Similarity=0.048 Sum_probs=32.5
Q ss_pred hhhcCCCCHHHHHHHHHHHHHHHHHHHhHhHhcCCCCCCHHHHHHHHHHHhhhhhhcc
Q 048580 26 YKNQLGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIFDLSCSADFMYN 83 (108)
Q Consensus 26 YMke~g~s~EeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~N~aR~~~~~Y~ 83 (108)
.|.++||..+.|...+++.+++--+.+--. .. ++....||.+++=|.
T Consensus 87 ~~~~~Gvpin~ae~~~~~r~~ev~r~~~~~---N~--------~r~v~~Arll~~p~m 133 (278)
T 3rxy_A 87 LMVEHGVPATAARDAIQGLLTRSLLRAQSA---NH--------DHTPSVARLLEMPFL 133 (278)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHHS---CT--------THHHHHHHHHTCCEE
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhcccc---cc--------cccccHHHHhCCcce
Confidence 477999999999999999998766544321 11 155666776666553
No 99
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=20.64 E-value=29 Score=24.17 Aligned_cols=24 Identities=13% Similarity=0.176 Sum_probs=18.2
Q ss_pred cchhhhhh-hcCCCCHHHHHHHHHH
Q 048580 20 PSAVECYK-NQLGVSEEEAVKALSL 43 (108)
Q Consensus 20 ~s~v~cYM-ke~g~s~EeA~~~i~~ 43 (108)
++.|-||+ +..|+|.++|++.++.
T Consensus 154 ~tvv~aYLm~~~~~s~~eAl~~vr~ 178 (219)
T 2y96_A 154 ATLVLAYLMIHKDMTLVDAIQQVAK 178 (219)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 44567874 5569999999988864
No 100
>3tq7_B Microtubule-associated protein RP/EB family membe; CAP-Gly domain, protein-protein interaction, microtubule BIN cytoskeleton, protein binding; 2.30A {Homo sapiens} SCOP: a.245.1.1
Probab=20.57 E-value=38 Score=20.62 Aligned_cols=18 Identities=17% Similarity=0.422 Sum_probs=10.2
Q ss_pred HHhhhhhhcccCCCCCCCc
Q 048580 74 LSCSADFMYNDAQDRFTHS 92 (108)
Q Consensus 74 ~aR~~~~~Y~~~~Dg~t~~ 92 (108)
+.|+..++|. ..|||..|
T Consensus 49 ~~~I~~ILYa-Teegf~~p 66 (82)
T 3tq7_B 49 ISGIIGILYA-TEEGFAPP 66 (82)
T ss_dssp HHHHHHHHTC-CC------
T ss_pred HHHHHHHHhc-cccCCCCC
Confidence 4678899999 99999987
No 101
>1sau_A Sulfite reductase, desulfoviridin-type subunit GA; orthogonal helical bundle, oxidoreductase; 1.12A {Archaeoglobus fulgidus} PDB: 2a5w_A
Probab=20.25 E-value=22 Score=23.10 Aligned_cols=34 Identities=18% Similarity=0.298 Sum_probs=26.4
Q ss_pred hhhhhcC-CCCHHHHHHHHHH---------HHHHHHHHHh--HhHh
Q 048580 24 ECYKNQL-GVSEEEAVKALSL---------AVANSWKVIN--EELL 57 (108)
Q Consensus 24 ~cYMke~-g~s~EeA~~~i~~---------~ie~~wK~ln--~e~l 57 (108)
++|+.+. ..|+|-|..--++ |-++.|+-|+ ++++
T Consensus 16 ~GfL~d~~dW~eevA~~lA~~~~~~~egIeLTe~HW~VI~flR~~Y 61 (115)
T 1sau_A 16 DGFLQDWEEWDEEVAEALAKDTRFSPQPIELTEEHWKIIRYLRDYF 61 (115)
T ss_dssp TSCBSSGGGCCHHHHHHHHTCTTSCSSCCCCCHHHHHHHHHHHHHH
T ss_pred CcCcCChHhCCHHHHHHHHhcccCCcCCceECHHHHHHHHHHHHHH
Confidence 5788887 7999999877766 7888998665 4454
Done!