BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048583
(449 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 202/446 (45%), Gaps = 59/446 (13%)
Query: 6 GP-PPTIIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P IIGNL QL+ N+ +L++++GP+F+L +G + +V+ K KEA +
Sbjct: 14 GPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYK 73
Query: 65 LQFSSR-------------------PV--------LSGTQNANRTEQFRQVQID-EIFRM 96
+FS R P L+ +N +Q + +I E +
Sbjct: 74 DEFSGRGDLPAFHAHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFL 133
Query: 97 IEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLH 156
+E + K P D ++ AP N+ I +I+FR F D + RL
Sbjct: 134 LEALRKTQGQPF--DPTFLIGCAPCNV-------IADILFRKHF-----DYNDEKFLRLM 179
Query: 157 SVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDP 213
+F E ++ +L+ F +L L G +R++ N ++ + + +++H LDP
Sbjct: 180 YLFNENFHLLSTPWLQLYNNFPS-FLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSLDP 238
Query: 214 KRPKVAEKEDLIDVLLAEMK----TADDHQTLDHIKATIME-NIAATDTIKVTLEWSMTN 268
P+ DL D LL EM+ +A+ T+D I T+ + A T+T TL + +
Sbjct: 239 NCPR-----DLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLI 293
Query: 269 LMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRF-QPAAEFVPRETTE 327
LMK PE +K+ +E+ V+ D + Y+ AVV E RF +P E T
Sbjct: 294 LMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATR 353
Query: 328 KCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAG 387
+ GY IP T V+ + ++ D Q + P++F PE F+ N ++ F PF G
Sbjct: 354 DTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY-FKPFSTG 412
Query: 388 RRICTGLPVAMPIVELALANLLYKFD 413
+R+C G +A + L L +L F+
Sbjct: 413 KRVCAGEGLARMELFLLLCAILQHFN 438
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 189/440 (42%), Gaps = 39/440 (8%)
Query: 14 NLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHDLQFSSR--- 70
NL Q+D L + ++YG +F++ LG R +++ + +EA FS R
Sbjct: 23 NLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKI 82
Query: 71 ----PVLSGT----QNANRTEQFRQVQIDEI--FRMI-----EKISKLGAAPAAADDDYV 115
P G N NR + R+ + + F M E+I + A ++
Sbjct: 83 AMVDPFFRGYGVIFANGNRWKVLRRFSVTTMRDFGMGKRSVEERIQE--EAQCLIEELRK 140
Query: 116 SSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMVGRIFLRDCL 175
S A ++ ++ NII + FGKRF + + L ++F +T +++ +F +
Sbjct: 141 SKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKML-NLFYQTFSLISSVFGQLFE 199
Query: 176 PFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEKEDLIDVLLAEM 232
F G +L G +R++ N + + +E H LDP P+ DLID L M
Sbjct: 200 LFSG-FLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPR-----DLIDTYLLHM 253
Query: 233 --KTADDHQTLDHIKA---TIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVV 287
+ ++ H H T+ A T+T TL + ++K P ++V +E+ V+
Sbjct: 254 EKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVI 313
Query: 288 KDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHIPAKTTVLVNV 346
+ D ++ Y +AV+ E RF VP T+ GY IP T V + +
Sbjct: 314 GPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLIL 373
Query: 347 WAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALA 406
D ++KPD F P+ F+ +N + FIPF G+RIC G +A + L
Sbjct: 374 STALHDPHYFEKPDAFNPDHFLDANGALKKTE-AFIPFSLGKRICLGEGIARAELFLFFT 432
Query: 407 NLLYKFDWTMPHGMEIEDLD 426
+L F P + ED+D
Sbjct: 433 TILQNFSMASP--VAPEDID 450
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 181/419 (43%), Gaps = 40/419 (9%)
Query: 29 KLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHDLQFSSRPVL---------SGTQNA 79
K S+ YG IFSL LG S +V++ + KE F+ RP L G N+
Sbjct: 42 KQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNS 101
Query: 80 NRTEQF---RQVQIDEIFRMIEKISKLGAAPAAADDDYVSSEA------PINLCETAMTL 130
+ R++ ++ FR K + + + + P + +
Sbjct: 102 RYGRGWVDHRRLAVNS-FRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNA 160
Query: 131 IRNIIFRVGFGKRFEDESTAAVSRLHSVFAET--QAMVGRIFLRDCLPFVGCWLDSLTGW 188
+ NI + FG+RF E T + +F+E A +FL + P++G G
Sbjct: 161 VSNITNLIIFGERFTYEDTD-FQHMIELFSENVELAASASVFLYNAFPWIGILP---FGK 216
Query: 189 NRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLDHIKATI 248
+++L N + +LIE ++P++ + +D L EM + + K +
Sbjct: 217 HQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQH--FVDAYLDEMDQGKNDPSSTFSKENL 274
Query: 249 MEN-----IAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEY 303
+ + IA T+T L W++ + P +VQKE+ ++ G DD ++ Y
Sbjct: 275 IFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPY 334
Query: 304 LKAVVKETLRFQPAAEFVP----RETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKP 359
+AV+ E LRF VP T+E V+ GY IP TTV+ N++++ D + W P
Sbjct: 335 TEAVLHEVLRF---CNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDP 391
Query: 360 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDWTMPH 418
+ F PERF+ S+ + +PF GRR C G +A + L LL +F PH
Sbjct: 392 EVFHPERFLDSSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPH 449
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 194/449 (43%), Gaps = 40/449 (8%)
Query: 6 GPPPT-IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P ++GNL Q+D L +L ++YG +F++ LG R +V+ +EA
Sbjct: 14 GPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQA 73
Query: 65 LQFSSR-------PVLSGT----QNANRTEQFRQVQIDEI--FRMI-----EKISKLGAA 106
FS R P+ G N R R+ + + F M E+I + A
Sbjct: 74 EAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQE--EA 131
Query: 107 PAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMV 166
++ S A ++ ++ NII + FGKRF D RL +F ++ +++
Sbjct: 132 RCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLI 190
Query: 167 GRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEKED 223
+ F G +L G +R++ N + + Q +E H LDP P+ D
Sbjct: 191 SSFSSQVFELFSG-FLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----D 244
Query: 224 LIDVLLAEM-KTADDHQTLDHIKATIMENI----AATDTIKVTLEWSMTNLMKNPEAMKK 278
IDV L M K D + H + I+ + A T+T TL + ++K P ++
Sbjct: 245 FIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTER 304
Query: 279 VQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHIP 337
VQKE+ V+ DD ++ Y AV+ E R F VP T+ GY IP
Sbjct: 305 VQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIP 364
Query: 338 AKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVA 397
T V + + D + ++ P+ F P F+ +N + +N F+PF G+RIC G +A
Sbjct: 365 KNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIA 423
Query: 398 MPIVELALANLLYKFDWTMPHGMEIEDLD 426
+ L +L F P + ED+D
Sbjct: 424 RTELFLFFTTILQNFSIASP--VPPEDID 450
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 194/449 (43%), Gaps = 40/449 (8%)
Query: 6 GPPPT-IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P ++GNL Q+D L +L ++YG +F++ LG R +V+ +EA
Sbjct: 14 GPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQA 73
Query: 65 LQFSSR-------PVLSGT----QNANRTEQFRQVQIDEI--FRMI-----EKISKLGAA 106
FS R P+ G N R R+ + + F M E+I + A
Sbjct: 74 EAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQE--EA 131
Query: 107 PAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMV 166
++ S A ++ ++ NII + FGKRF D RL +F ++ +++
Sbjct: 132 RCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLI 190
Query: 167 GRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEKED 223
+ F G +L G +R++ N + + Q +E H LDP P+ D
Sbjct: 191 SSFSSQVFELFSG-FLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----D 244
Query: 224 LIDVLLAEM-KTADDHQTLDHIKATIMENI----AATDTIKVTLEWSMTNLMKNPEAMKK 278
IDV L M K D + H + I+ + A T+T TL + ++K P ++
Sbjct: 245 FIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTER 304
Query: 279 VQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHIP 337
VQKE+ V+ DD ++ Y AV+ E R F VP T+ GY IP
Sbjct: 305 VQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIP 364
Query: 338 AKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVA 397
T V + + D + ++ P+ F P F+ +N + +N F+PF G+RIC G +A
Sbjct: 365 KNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICAGEGIA 423
Query: 398 MPIVELALANLLYKFDWTMPHGMEIEDLD 426
+ L +L F P + ED+D
Sbjct: 424 RTELFLFFTTILQNFSIASP--VPPEDID 450
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 181/419 (43%), Gaps = 40/419 (9%)
Query: 29 KLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHDLQFSSRPVL---------SGTQNA 79
K S+ YG IFSL LG S +V++ + KE F+ RP L G N+
Sbjct: 42 KQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNS 101
Query: 80 NRTEQF---RQVQIDEIFRMIEKISKLGAAPAAADDDYVSSEA------PINLCETAMTL 130
+ R++ ++ FR K + + + + P + +
Sbjct: 102 RYGRGWVDHRRLAVNS-FRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNA 160
Query: 131 IRNIIFRVGFGKRFEDESTAAVSRLHSVFAET--QAMVGRIFLRDCLPFVGCWLDSLTGW 188
+ NI + FG+RF E T + +F+E A +FL + P++G G
Sbjct: 161 VSNITNLIIFGERFTYEDTD-FQHMIELFSENVELAASASVFLYNAFPWIGILP---FGK 216
Query: 189 NRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLDHIKATI 248
+++L N + +LIE ++P++ + +D L EM + + K +
Sbjct: 217 HQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQH--FVDAYLDEMDQGKNDPSSTFSKENL 274
Query: 249 MEN-----IAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEY 303
+ + IA T+T L W++ + P +VQKE+ ++ G DD ++ Y
Sbjct: 275 IFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPY 334
Query: 304 LKAVVKETLRFQPAAEFVP----RETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKP 359
+AV+ E LRF VP T+E V+ GY IP TTV+ N++++ D + W P
Sbjct: 335 TEAVLHEVLRF---CNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDP 391
Query: 360 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDWTMPH 418
+ F PERF+ S+ + +PF GRR C G +A + L LL +F PH
Sbjct: 392 EVFHPERFLDSSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPH 449
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 194/449 (43%), Gaps = 40/449 (8%)
Query: 6 GPPPT-IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P ++GNL Q+D L +L ++YG +F++ LG R +V+ +EA
Sbjct: 14 GPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQA 73
Query: 65 LQFSSR-------PVLSGT----QNANRTEQFRQVQIDEI--FRMI-----EKISKLGAA 106
FS R P+ G N R R+ + + F M E+I + A
Sbjct: 74 EAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQE--EA 131
Query: 107 PAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMV 166
++ S A ++ ++ NII + FGKRF D RL +F ++ +++
Sbjct: 132 RCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLI 190
Query: 167 GRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEKED 223
+ F G +L G +R++ N + + Q +E H LDP P+ D
Sbjct: 191 SSFSSQVFELFSG-FLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----D 244
Query: 224 LIDVLLAEM-KTADDHQTLDHIKATIMENI----AATDTIKVTLEWSMTNLMKNPEAMKK 278
IDV L M K D + H + I+ + A T+T TL + ++K P ++
Sbjct: 245 FIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTER 304
Query: 279 VQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHIP 337
VQKE+ V+ DD ++ Y AV+ E R F VP T+ GY IP
Sbjct: 305 VQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIP 364
Query: 338 AKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVA 397
T V + + D + ++ P+ F P F+ +N + +N F+PF G+RIC G +A
Sbjct: 365 KNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIA 423
Query: 398 MPIVELALANLLYKFDWTMPHGMEIEDLD 426
+ L +L F P + ED+D
Sbjct: 424 RTELFLFFTTILQNFSIASP--VPPEDID 450
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 194/449 (43%), Gaps = 40/449 (8%)
Query: 6 GPPPT-IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P ++GNL Q+D L +L ++YG +F++ LG R +V+ +EA
Sbjct: 14 GPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQA 73
Query: 65 LQFSSR-------PVLSGT----QNANRTEQFRQVQIDEI--FRMI-----EKISKLGAA 106
FS R P+ G N R R+ + + F M E+I + A
Sbjct: 74 EAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQE--EA 131
Query: 107 PAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMV 166
++ S A ++ ++ NII + FGKRF D RL +F ++ +++
Sbjct: 132 RCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLI 190
Query: 167 GRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEKED 223
+ F G +L G +R++ N + + Q +E H LDP P+ D
Sbjct: 191 SSFSSQVFELFSG-FLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----D 244
Query: 224 LIDVLLAEM-KTADDHQTLDHIKATIMENI----AATDTIKVTLEWSMTNLMKNPEAMKK 278
IDV L M K D + H + I+ + A T+T TL + ++K P ++
Sbjct: 245 FIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTER 304
Query: 279 VQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHIP 337
VQKE+ V+ DD ++ Y AV+ E R F VP T+ GY IP
Sbjct: 305 VQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIP 364
Query: 338 AKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVA 397
T V + + D + ++ P+ F P F+ +N + +N F+PF G+RIC G +A
Sbjct: 365 KNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIA 423
Query: 398 MPIVELALANLLYKFDWTMPHGMEIEDLD 426
+ L +L F P + ED+D
Sbjct: 424 RTELFLFFTTILQNFSIASP--VPPEDID 450
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 194/449 (43%), Gaps = 40/449 (8%)
Query: 6 GPPPT-IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P ++GNL Q+D L +L ++YG +F++ LG R +V+ +EA
Sbjct: 14 GPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQA 73
Query: 65 LQFSSR-------PVLSGT----QNANRTEQFRQVQIDEI--FRMI-----EKISKLGAA 106
FS R P+ G N R R+ + + F M E+I + A
Sbjct: 74 EAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQE--EA 131
Query: 107 PAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMV 166
++ S A ++ ++ NII + FGKRF D RL +F ++ +++
Sbjct: 132 RCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLI 190
Query: 167 GRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEKED 223
+ F G +L G +R++ N + + Q +E H LDP P+ D
Sbjct: 191 SSFSSQVFELFSG-FLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----D 244
Query: 224 LIDVLLAEM-KTADDHQTLDHIKATIMENI----AATDTIKVTLEWSMTNLMKNPEAMKK 278
IDV L M K D + H + I+ + A T+T TL + ++K P ++
Sbjct: 245 FIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTER 304
Query: 279 VQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHIP 337
VQKE+ V+ DD ++ Y AV+ E R F VP T+ GY IP
Sbjct: 305 VQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIP 364
Query: 338 AKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVA 397
T V + + D + ++ P+ F P F+ +N + +N F+PF G+RIC G +A
Sbjct: 365 KNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIA 423
Query: 398 MPIVELALANLLYKFDWTMPHGMEIEDLD 426
+ L +L F P + ED+D
Sbjct: 424 RTELFLFFTTILQNFSIASP--VPPEDID 450
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 201/453 (44%), Gaps = 72/453 (15%)
Query: 6 GPPPT-IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P +IGN+ Q+ +++ L LSK YGP+F+L GL+ +V+ + KEA
Sbjct: 15 GPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLG 74
Query: 65 LQFSSRPVLSGTQNANRT-----------EQFRQVQI------------------DEIFR 95
+FS R + + ANR ++ R+ + +E
Sbjct: 75 EEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARC 134
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
++E++ K A+P D ++ AP N +I + F KRF D L
Sbjct: 135 LVEELRKTKASPC--DPTFILGCAPCN-----------VICSIIFHKRF-DYKDQQFLNL 180
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LD 212
E ++ +++ C F +D G + +L N + + +++H +D
Sbjct: 181 MEKLNENIKILSSPWIQICNNF-SPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMD 239
Query: 213 PKRPKVAEKEDLIDVLLAEMKTADDHQ----TLDHIKATIMENIAA-TDTIKVTLEWSMT 267
P +D ID L +M+ +Q T++ ++ T ++ A T+T TL +++
Sbjct: 240 MNNP-----QDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALL 294
Query: 268 NLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRF---QPAAEFVPRE 324
L+K+PE KVQ+E+ V+ D + Y AVV E R+ P + +P
Sbjct: 295 LLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTS--LPHA 352
Query: 325 TTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE---- 380
T Y IP TT+L+++ ++ D + + P+ F P F +D GG NF+
Sbjct: 353 VTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHF----LDEGG-NFKKSKY 407
Query: 381 FIPFGAGRRICTGLPVAMPIVELALANLLYKFD 413
F+PF AG+RIC G +A + L L ++L F+
Sbjct: 408 FMPFSAGKRICVGEALAGMELFLFLTSILQNFN 440
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 197/449 (43%), Gaps = 64/449 (14%)
Query: 6 GPPPT-IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P IIGN+ Q+D ++ SK YGP+F++ G+ +V + KEA +
Sbjct: 14 GPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNG 73
Query: 65 LQFSSRP-------VLSG----TQNANRTEQFRQVQI------------------DEIFR 95
+FS R + G + N R ++ R+ + +E
Sbjct: 74 EEFSGRGNSPISQRITKGLGIISSNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQEEAHC 133
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
++E++ K A+P D ++ AP N+I V F KRF+ + ++ L
Sbjct: 134 LVEELRKTKASP--CDPTFILGCAPC-----------NVICSVVFQKRFDYKDQNFLT-L 179
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LD 212
F E ++ +++ C F +D G + ++ N + ++ +++H LD
Sbjct: 180 MKRFNENFRILNSPWIQVCNNF-PLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQASLD 238
Query: 213 PKRPKVAEKEDLIDVLLAEMKTADDHQ----TLDHIKATIME-NIAATDTIKVTLEWSMT 267
P+ D ID L +M+ D+Q ++++ T+ + +A T+T TL + +
Sbjct: 239 VNNPR-----DFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLL 293
Query: 268 NLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQ---PAAEFVPRE 324
L+K+PE KVQ+E+ V+ D + Y AVV E R+ P VP
Sbjct: 294 LLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTG--VPHA 351
Query: 325 TTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPF 384
T Y IP TT++ + ++ D + + P+ F P F+ N + ++ F+PF
Sbjct: 352 VTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY-FMPF 410
Query: 385 GAGRRICTGLPVAMPIVELALANLLYKFD 413
AG+RIC G +A + L L +L F+
Sbjct: 411 SAGKRICAGEGLARMELFLFLTTILQNFN 439
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 203/454 (44%), Gaps = 74/454 (16%)
Query: 6 GPPP-TIIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P +IGN+ Q+ +++ L LSK YGP+F+L GL+ +V+ + KEA
Sbjct: 13 GPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLG 72
Query: 65 LQFSSRPVLSGTQNANRT-----------EQFRQVQI------------------DEIFR 95
+FS R + + ANR ++ R+ + +E
Sbjct: 73 EEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARC 132
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
++E++ K A+P D ++ AP N +I + F KRF+ + ++ +
Sbjct: 133 LVEELRKTKASPC--DPTFILGCAPCN-----------VICSIIFHKRFDYKDQQFLNLM 179
Query: 156 HSVFAETQAMVGR-IFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---L 211
+ + + I + + P LD G + +L N + + +++H +
Sbjct: 180 EKLNENIEILSSPWIQVYNNFP---ALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQESM 236
Query: 212 DPKRPKVAEKEDLIDVLLAEMKTADDHQ----TLDHIKATIMENIAA-TDTIKVTLEWSM 266
D P +D ID L +M+ +Q T++ ++ T ++ A T+T TL +++
Sbjct: 237 DMNNP-----QDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYAL 291
Query: 267 TNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRF---QPAAEFVPR 323
L+K+PE KVQ+E+ V+ D + Y AVV E R+ P + +P
Sbjct: 292 LLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTS--LPH 349
Query: 324 ETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE--- 380
T Y IP TT+L+++ ++ D + + P+ F P F +D GG NF+
Sbjct: 350 AVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHF----LDEGG-NFKKSK 404
Query: 381 -FIPFGAGRRICTGLPVAMPIVELALANLLYKFD 413
F+PF AG+RIC G +A + L L ++L F+
Sbjct: 405 YFMPFSAGKRICVGEALAGMELFLFLTSILQNFN 438
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 197/449 (43%), Gaps = 64/449 (14%)
Query: 6 GPPPT-IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P +IGN+ Q+D +++ L LSK YGP+F+L GL +V+ ++ KEA
Sbjct: 15 GPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLG 74
Query: 65 LQFSSRPVLSGTQNANRT-----------EQFRQVQI------------------DEIFR 95
+FS R + ANR ++ R+ + +E
Sbjct: 75 EEFSGRGHFPLAERANRGFGIVFSNGKRWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARC 134
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
++E++ K A+P D ++ AP N +I + F KRF D L
Sbjct: 135 LVEELRKTKASPC--DPTFILGCAPCN-----------VICSIIFQKRF-DYKDQQFLNL 180
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LD 212
E +V +++ C F +D G + +L N + + + +++H +D
Sbjct: 181 MEKLNENIRIVSTPWIQICNNF-PTIIDYFPGTHNKLLKNLAFMESDILEKVKEHQESMD 239
Query: 213 PKRPKVAEKEDLIDVLLAEMKTADDHQ----TLDHIKATIMENIAA-TDTIKVTLEWSMT 267
P+ D ID L +M+ +Q T++++ T + + A T+T TL +++
Sbjct: 240 INNPR-----DFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALL 294
Query: 268 NLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRF---QPAAEFVPRE 324
L+K+PE KVQ+E+ VV D + Y AVV E R+ P + +P
Sbjct: 295 LLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTS--LPHA 352
Query: 325 TTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPF 384
T Y IP TT+L ++ ++ D + + P+ F P F+ + N+ F+PF
Sbjct: 353 VTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY-FMPF 411
Query: 385 GAGRRICTGLPVAMPIVELALANLLYKFD 413
AG+RIC G +A + L L +L F+
Sbjct: 412 SAGKRICVGEGLARMELFLFLTFILQNFN 440
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 203/460 (44%), Gaps = 59/460 (12%)
Query: 6 GPPP-TIIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P IIGN+ Q+DA +++ L K S+ YGP+F++ LG++ +V+ + KEA
Sbjct: 14 GPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVDLG 73
Query: 65 LQFSSR---PVLSGT--------QNANRTEQFRQVQI------------------DEIFR 95
+F+ R P+L NA ++ R+ + +E
Sbjct: 74 EEFAGRGSVPILEKVSKGLGIAFSNAKTWKEMRRFSLMTLRNFGMGKRSIEDRIQEEARC 133
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
++E++ K A+P D ++ AP N+I V F RF D +L
Sbjct: 134 LVEELRKTNASP--CDPTFILGCAPC-----------NVICSVIFHNRF-DYKDEEFLKL 179
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LD 212
E ++G +L+ F LD G ++ L N + +++H LD
Sbjct: 180 MESLHENVELLGTPWLQVYNNFPA-LLDYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLD 238
Query: 213 PKRPKVAEKEDLIDVLLAEMKTADDHQ-TLDHIKATIMENI-AATDTIKVTLEWSMTNLM 270
P+ D ID L +M+ ++ + TL+ + + + A T+T TL +S+ L+
Sbjct: 239 VNNPR-----DFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLL 293
Query: 271 KNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRF-QPAAEFVPRETTEKC 329
K+PE +VQ+E+ V+ D R+ Y AV+ E RF +P T
Sbjct: 294 KHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDV 353
Query: 330 VIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRR 389
Y IP T ++ ++ ++ D + + P F P F+ + + ++ F+PF AG+R
Sbjct: 354 RFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKR 412
Query: 390 ICTGLPVAMPIVELALANLLYKFDWTMPHGMEIEDLDYDA 429
+C G +A + L L ++L F + +E +DLD A
Sbjct: 413 MCVGEGLARMELFLFLTSILQNFK--LQSLVEPKDLDITA 450
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 197/432 (45%), Gaps = 39/432 (9%)
Query: 27 LWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHDLQFSSRPVLSGTQNANRTE--- 83
+KL K+YGPI+S+R+G ++ +++ +LAKE FS RP ++ A+
Sbjct: 35 FFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGI 94
Query: 84 ---------QFRQVQIDEIFRMI----EKISKLGAAPAAADDDYVSSE--APINLCETAM 128
Q + F + +K+ K+ + D +++ I++
Sbjct: 95 AFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVF 154
Query: 129 TLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGW 188
+ N+I + F +++ L+ + + ++ + +D L + WL
Sbjct: 155 VAVTNVISLICFNTSYKNGD----PELNVIQNYNEGIIDNLS-KDSLVDLVPWLKIFPNK 209
Query: 189 N-RRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTAD--------DHQ 239
+L+++ + + +++E++ + R +++D L+ +D D +
Sbjct: 210 TLEKLKSHVKIRNDLLNKILENYKEKFRSDSIT--NMLDTLMQAKMNSDNGNAGPDQDSE 267
Query: 240 TL--DHIKATIMENIAA-TDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDED 296
L +HI TI + A +T ++W++ L+ NP+ KK+ +E+ V
Sbjct: 268 LLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTIS 327
Query: 297 DLPRLEYLKAVVKETLRFQPAAE-FVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQV 355
D RL L+A ++E LR +P A +P + I + + T V++N+WA+ + +
Sbjct: 328 DRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKE 387
Query: 356 WDKPDEFIPERFVG-SNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDW 414
W +PD+F+PERF+ + + + ++PFGAG R C G +A + L +A LL +FD
Sbjct: 388 WHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDL 447
Query: 415 TMPHGMEIEDLD 426
+P ++ L+
Sbjct: 448 EVPDDGQLPSLE 459
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 196/461 (42%), Gaps = 53/461 (11%)
Query: 8 PPTIIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHDLQF 67
PP + G LH L NL L L+++ GP++ LRLGL+ +V++S + +EA + F
Sbjct: 31 PPLVPGFLHLLQP-NLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDF 89
Query: 68 SSRPVLSGTQ-NANRTEQFRQVQIDEIFRMIEKISK----LGAAPAA-----------AD 111
+ RP + + + R + +++ +K+++ LG + +
Sbjct: 90 AGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVDQLTQEFCE 149
Query: 112 DDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMVGRIFL 171
V + AP+ + + L +II + FG + ED A +T I +
Sbjct: 150 RMRVQAGAPVTIQKEFSLLTCSIICYLTFGNK-EDTLVHAFHDCVQDLMKTWDHWS-IQI 207
Query: 172 RDCLPFV------GCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEK-EDL 224
D +PF+ G W RL+ + D + ++ + H K VA + D+
Sbjct: 208 LDMVPFLRFFPNPGLW---------RLKQAIENRDHMVEKQLRRH---KESMVAGQWRDM 255
Query: 225 IDVLLA-----EMKTADDHQTLDHIKATIME-NIAATDTIKVTLEWSMTNLMKNPEAMKK 278
D +L ++ H+ ++++ I T+T TL W++ L+ +PE ++
Sbjct: 256 TDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRR 315
Query: 279 VQKEVRCVVKDKGF---VDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGY 334
+Q+E+ + V D RL L A + E LR +P +P TT I GY
Sbjct: 316 LQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGY 375
Query: 335 HIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGL 394
IP V+ N+ D VW++P EF P+RF+ G N + FG G R+C G
Sbjct: 376 DIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEP-----GANPSALAFGCGARVCLGE 430
Query: 395 PVAMPIVELALANLLYKFDWTMPHGMEIEDLDYDANPGFTL 435
+A + + LA LL F P + L D G L
Sbjct: 431 SLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNL 471
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 201/455 (44%), Gaps = 55/455 (12%)
Query: 11 IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHDLQFSSR 70
+IG++ L N L ++S+QYG + +R+G +V+S ++A F R
Sbjct: 21 LIGHMLTL-GKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGR 79
Query: 71 P------------VLSGTQNANRTEQFRQVQIDEIFRMIEKISKLGAAPAAADDDYVSSE 118
P +S + ++ R+ + S ++ + +++VS E
Sbjct: 80 PDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTSCYLEEHVSKE 139
Query: 119 API---------------NLCETAMTLIRNIIFRVGFGKRFE--DESTAAVSRLHSVFAE 161
A + N + + N+I + FG+R++ + ++ L++ F E
Sbjct: 140 AEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNNFGE 199
Query: 162 TQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVY----QQLIEDHLDPKRPK 217
+VG D +P + +L + + N F D ++ + Q+++++H K +
Sbjct: 200 ---VVGSGNPADFIPILR-YLPNPS------LNAFKDLNEKFYSFMQKMVKEHY--KTFE 247
Query: 218 VAEKEDLIDVLL--AEMKTADDHQTLDHIKATIMENI-----AATDTIKVTLEWSMTNLM 270
D+ D L+ + K D++ + I+ + A DT+ + WS+ L+
Sbjct: 248 KGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLV 307
Query: 271 KNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKC 329
NP +K+Q+E+ V+ D L Y++A + ET R F +P TT
Sbjct: 308 MNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDT 367
Query: 330 VIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE-FIPFGAGR 388
+ G++IP V VN W I D ++W P EF+PERF+ + + E I FG G+
Sbjct: 368 SLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGK 427
Query: 389 RICTGLPVAMPIVELALANLLYKFDWTMPHGMEIE 423
R C G +A V L LA LL + ++++P G++++
Sbjct: 428 RKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVD 462
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 192/443 (43%), Gaps = 59/443 (13%)
Query: 17 QLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHDLQFSSRPVLSGT 76
+D N +C +L +++G +FSL+L +V++ +EA TH + RP + T
Sbjct: 26 HVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPIT 85
Query: 77 Q---NANRTEQFRQVQIDEIFR-----MIEKISKLGAAPAAADDDYVSSEA--------- 119
Q R++ + +R + + LG + + +V+ EA
Sbjct: 86 QILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQ-WVTEEAACLCAAFAN 144
Query: 120 -------PINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMVGRIFLR 172
P L + A++ N+I + G+RFE + + L + G FLR
Sbjct: 145 HSGRPFRPNGLLDKAVS---NVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESG--FLR 199
Query: 173 DCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHL--DPKRPKVAEKEDLIDVLLA 230
+ L V L + LR + ++ + L E + DP +P DL + LA
Sbjct: 200 EVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPP----RDLTEAFLA 255
Query: 231 EMKTAD-------DHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEV 283
EM+ A + + L + A + A T TL W + ++ +P+ ++VQ+E+
Sbjct: 256 EMEKAKGNPESSFNDENLRIVVADLFS--AGMVTTSTTLAWGLLLMILHPDVQRRVQQEI 313
Query: 284 RCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVP----RETTEKCVIDGYHIPAK 339
V+ + D + Y AV+ E RF + VP T+ + G+ IP
Sbjct: 314 DDVIGQVRRPEMGDQAHMPYTTAVIHEVQRF---GDIVPLGVTHMTSRDIEVQGFRIPKG 370
Query: 340 TTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE---FIPFGAGRRICTGLPV 396
TT++ N+ ++ +D VW+KP F PE F +D G + F+PF AGRR C G P+
Sbjct: 371 TTLITNLSSVLKDEAVWEKPFRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEPL 426
Query: 397 AMPIVELALANLLYKFDWTMPHG 419
A + L +LL F +++P G
Sbjct: 427 ARMELFLFFTSLLQHFSFSVPTG 449
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 194/445 (43%), Gaps = 63/445 (14%)
Query: 17 QLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHDLQFSSRPVLSGT 76
+D N +C +L +++G +FSL+L +V++ +EA TH + RP + T
Sbjct: 26 HVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPIT 85
Query: 77 Q---NANRTEQFRQVQIDEIFR-----MIEKISKLGAAPAAADDDYVSSEA--------- 119
Q R++ + +R + + LG + + +V+ EA
Sbjct: 86 QILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQ-WVTEEAACLCAAFAN 144
Query: 120 -------PINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMVGRIFLR 172
P L + A++ N+I + G+RFE + + L + G FLR
Sbjct: 145 HSGRPFRPNGLLDKAVS---NVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESG--FLR 199
Query: 173 DCLPFVGC--WLDSLTGWNRRLRNNFSDCDKVYQQLIEDHL--DPKRPKVAEKEDLIDVL 228
+ L V + +L G R + F ++ + L E + DP +P DL +
Sbjct: 200 EVLNAVPVDRHIPALAGKVLRFQKAF--LTQLDELLTEHRMTWDPAQPP----RDLTEAF 253
Query: 229 LAEMKTAD-------DHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQK 281
LAEM+ A + + L + A + A T TL W + ++ +P+ ++VQ+
Sbjct: 254 LAEMEKAKGNPESSFNDENLRIVVADLFS--AGMVTTSTTLAWGLLLMILHPDVQRRVQQ 311
Query: 282 EVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVP----RETTEKCVIDGYHIP 337
E+ V+ + D + Y AV+ E RF + VP T+ + G+ IP
Sbjct: 312 EIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRF---GDIVPLGMTHMTSRDIEVQGFRIP 368
Query: 338 AKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE---FIPFGAGRRICTGL 394
TT++ N+ ++ +D VW+KP F PE F +D G + F+PF AGRR C G
Sbjct: 369 KGTTLITNLSSVLKDEAVWEKPFRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGE 424
Query: 395 PVAMPIVELALANLLYKFDWTMPHG 419
P+A + L +LL F +++P G
Sbjct: 425 PLARMELFLFFTSLLQHFSFSVPTG 449
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 193/461 (41%), Gaps = 68/461 (14%)
Query: 6 GPPPT-----IIGNLHQL-DATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEA 59
G PP +IGN + A +L+F +L+++YG +F +RLG +V++ + +A
Sbjct: 9 GKPPGPFAWPLIGNAAAVGQAAHLSFA--RLARRYGDVFQIRLGSCPIVVLNGERAIHQA 66
Query: 60 FKTHDLQFSSRP------VLSGTQN---ANRTEQFRQVQIDEIFRMIEKISKLGAAPAAA 110
F+ RP V+SG ++ + +E ++ VQ M+
Sbjct: 67 LVQQGSAFADRPSFASFRVVSGGRSMAFGHYSEHWK-VQRRAAHSMMRNFFTRQPRSRQV 125
Query: 111 DDDYVSSEAPINLCETAMTLIR-------------------NIIFRVGFGKRFEDESTAA 151
+ +V SEA E L+R N++ V FG R+ +
Sbjct: 126 LEGHVLSEAR----ELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPE- 180
Query: 152 VSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIED-- 209
L S E VG L D +P WL R + F ++ + I D
Sbjct: 181 FRELLSHNEEFGRTVGAGSLVDVMP----WLQYFPNPVRTVFREFEQLNRNFSNFILDKF 236
Query: 210 --HLDPKRPKVAEKEDLID--VLLAEMKTADDHQT------LDHIKATIMENIAAT-DTI 258
H + RP A + D++D +L AE K A D L+++ ATI + A+ DT+
Sbjct: 237 LRHCESLRPGAAPR-DMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTL 295
Query: 259 KVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAA 318
L+W + + P+ +VQ E+ VV D P L Y+ A + E +RF
Sbjct: 296 STALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFV 355
Query: 319 EF-VPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGS----NID 373
+P TT + GYHIP T V VN W++ D W P+ F P RF+ N D
Sbjct: 356 PVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKD 415
Query: 374 MGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDW 414
+ + + F G+R C G ++ + L ++ L ++ D+
Sbjct: 416 LTSR---VMIFSVGKRRCIGEELSKMQLFLFISILAHQCDF 453
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 191/463 (41%), Gaps = 60/463 (12%)
Query: 6 GPPPT-IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P IGN QL+ + L K+S++YGP+F++ LG R +V+ KEA
Sbjct: 14 GPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQA 73
Query: 65 LQFSSRP-------VLSGT----QNANRTEQFRQVQIDEIFRMIEKISKLGAAPAAADD- 112
+FS R + G N R +Q R+ I + + K G ++
Sbjct: 74 EEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRRFSIATLRGF--GVGKRGIEERIQEEA 131
Query: 113 ----DYVSSEAPINLCETAM--TLIRNIIFRVGFGKRFEDESTAAVSRLHSV---FAETQ 163
D + N+ T + N+I + FG RF+ E +S L + F T
Sbjct: 132 GFLIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLGSFQFTA 191
Query: 164 AMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAE 220
G+++ + L G ++ + + +E + LDP P+
Sbjct: 192 TSTGQLY-----EMFSSVMKHLPGPQQQAFKELQGLEDFIAKKVEHNQRTLDPNSPR--- 243
Query: 221 KEDLIDVLLAEMKTADDHQTLD-HIKATIMENI----AATDTIKVTLEWSMTNLMKNPEA 275
D ID L M+ + + + ++K +M + A T+T+ TL + LMK+PE
Sbjct: 244 --DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEV 301
Query: 276 MKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID--- 332
KV +E+ V+ +D ++ Y +AV+ E RF + +P + D
Sbjct: 302 EAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRF---GDMLPMGLAHRVNKDTKF 358
Query: 333 -GYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQ---NFEFIPFGAGR 388
+ +P T V + ++ RD + + P +F P+ F +D GQ + F+PF G+
Sbjct: 359 RDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHF----LDKKGQFKKSDAFVPFSIGK 414
Query: 389 RICTGLPVAMPIVELALANLLYKFDWTMPHGMEIEDLDYDANP 431
R C G +A + L ++ F + P + D D +P
Sbjct: 415 RYCFGEGLARMELFLFFTTIMQNFRFKSPQSPK----DIDVSP 453
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 192/453 (42%), Gaps = 73/453 (16%)
Query: 22 NLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHDLQFSSRP---------- 71
N L ++S++YG + +R+G +V+S ++A F RP
Sbjct: 36 NPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITD 95
Query: 72 --VLSGTQNANRTEQFRQVQIDEIFRMIEKISKLGAAPAAADDDYVSSEA---------- 119
L+ + ++ R+ S ++ + +++VS EA
Sbjct: 96 GQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQEL 155
Query: 120 --------PINLCETAMTLIRNIIFRVGFGKRF---EDESTAAVSRLHSVFAETQAMVGR 168
P N + + N+I + FG+ F DE + V H F ET +
Sbjct: 156 MAGPGHFDPYN---QVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHE-FVETASSGNP 211
Query: 169 IFLRDCLPFV-GCWLDSLTGWNRR--------LRNNFSDCDKVYQQLIEDHL---DPKRP 216
+ L ++ L +N+R ++ ++ D DK + I L K P
Sbjct: 212 LDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDFDKNSVRDITGALFKHSKKGP 271
Query: 217 KVAEKEDLIDVLLAEMKTADDHQTLDHIKATIMENI--AATDTIKVTLEWSMTNLMKNPE 274
+ + L+ + K + ++ +I A DT+ + WS+ L+ PE
Sbjct: 272 RASGN------LIPQEKIVN-----------LVNDIFGAGFDTVTTAISWSLMYLVTKPE 314
Query: 275 AMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDG 333
+K+QKE+ V+ + D P+L YL+A + ET R F +P TT ++G
Sbjct: 315 IQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNG 374
Query: 334 YHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFV---GSNIDMGGQNFEFIPFGAGRRI 390
++IP K V VN W + D ++W+ P EF PERF+ G+ I+ + + FG G+R
Sbjct: 375 FYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSE-KMMLFGMGKRR 433
Query: 391 CTGLPVAMPIVELALANLLYKFDWTMPHGMEIE 423
C G +A + L LA LL + ++++P G++++
Sbjct: 434 CIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVD 466
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 180/441 (40%), Gaps = 50/441 (11%)
Query: 6 GPPPT-IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P IGN QL+ + L K+S++YGP+F++ LG R +V+ +EA
Sbjct: 14 GPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQA 73
Query: 65 LQFSSRP-------VLSGT----QNANRTEQFRQVQIDEIFRMIEKISKLGAAPAAADD- 112
+FS R V G N R +Q R+ I + + K G ++
Sbjct: 74 EEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDF--GVGKRGIEERIQEEA 131
Query: 113 ----DYVSSEAPINLCETAM--TLIRNIIFRVGFGKRFEDESTAAVSRLH---SVFAETQ 163
D + N+ T + N+I + FG RF+ + +S L +F T
Sbjct: 132 GFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTS 191
Query: 164 AMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAE 220
G+++ + L G ++ + + +E + LDP P+
Sbjct: 192 TSTGQLY-----EMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEHNQRTLDPNSPR--- 243
Query: 221 KEDLIDVLLAEMKTADDHQTLD-HIKATIMEN----IAATDTIKVTLEWSMTNLMKNPEA 275
D ID L M+ + + + ++K +M I T+T+ TL + LMK+PE
Sbjct: 244 --DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEV 301
Query: 276 MKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVP----RETTEKCVI 331
KV +E+ V+ +D ++ Y++AV+ E RF + +P R +
Sbjct: 302 EAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRF---GDVIPMSLARRVKKDTKF 358
Query: 332 DGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRIC 391
+ +P T V + ++ RD + P +F P+ F+ + F+PF G+R C
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNC 417
Query: 392 TGLPVAMPIVELALANLLYKF 412
G +A + L ++ F
Sbjct: 418 FGEGLARMELFLFFTTVMQNF 438
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 180/441 (40%), Gaps = 50/441 (11%)
Query: 6 GPPPT-IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P IGN QL+ + L K+S++YGP+F++ LG R +V+ +EA
Sbjct: 14 GPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQA 73
Query: 65 LQFSSRP-------VLSGT----QNANRTEQFRQVQIDEIFRMIEKISKLGAAPAAADD- 112
+FS R V G N R +Q R+ I + + K G ++
Sbjct: 74 EEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDF--GVGKRGIEERIQEEA 131
Query: 113 ----DYVSSEAPINLCETAM--TLIRNIIFRVGFGKRFEDESTAAVSRLH---SVFAETQ 163
D + N+ T + N+I + FG RF+ + +S L +F T
Sbjct: 132 GFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTS 191
Query: 164 AMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAE 220
G+++ + L G ++ + + +E + LDP P+
Sbjct: 192 TSTGQLY-----EMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR--- 243
Query: 221 KEDLIDVLLAEMKTADDHQTLD-HIKATIMEN----IAATDTIKVTLEWSMTNLMKNPEA 275
D ID L M+ + + + ++K +M I T+T+ TL + LMK+PE
Sbjct: 244 --DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEV 301
Query: 276 MKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVP----RETTEKCVI 331
KV +E+ V+ +D ++ Y++AV+ E RF + +P R +
Sbjct: 302 EAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRF---GDVIPMSLARRVKKDTKF 358
Query: 332 DGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRIC 391
+ +P T V + ++ RD + P +F P+ F+ + F+PF G+R C
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNC 417
Query: 392 TGLPVAMPIVELALANLLYKF 412
G +A + L ++ F
Sbjct: 418 FGEGLARMELFLFFTTVMQNF 438
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 180/441 (40%), Gaps = 50/441 (11%)
Query: 6 GPPPT-IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P IGN QL+ + L K+S++YGP+F++ LG R +V+ +EA
Sbjct: 14 GPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQA 73
Query: 65 LQFSSRP-------VLSGT----QNANRTEQFRQVQIDEIFRMIEKISKLGAAPAAADD- 112
+FS R V G N R +Q R+ I + + K G ++
Sbjct: 74 EEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDF--GVGKRGIEERIQEEA 131
Query: 113 ----DYVSSEAPINLCETAM--TLIRNIIFRVGFGKRFEDESTAAVSRLH---SVFAETQ 163
D + N+ T + N+I + FG RF+ + +S L +F T
Sbjct: 132 GFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTS 191
Query: 164 AMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAE 220
G+++ + L G ++ + + +E + LDP P+
Sbjct: 192 TSTGQLY-----EMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR--- 243
Query: 221 KEDLIDVLLAEMKTADDHQTLD-HIKATIMEN----IAATDTIKVTLEWSMTNLMKNPEA 275
D ID L M+ + + + ++K +M I T+T+ TL + LMK+PE
Sbjct: 244 --DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEV 301
Query: 276 MKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVP----RETTEKCVI 331
KV +E+ V+ +D ++ Y++AV+ E RF + +P R +
Sbjct: 302 EAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRF---GDVIPMSLARRVKKDTKF 358
Query: 332 DGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRIC 391
+ +P T V + ++ RD + P +F P+ F+ + F+PF G+R C
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNC 417
Query: 392 TGLPVAMPIVELALANLLYKF 412
G +A + L ++ F
Sbjct: 418 FGEGLARMELFLFFTTVMQNF 438
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 180/441 (40%), Gaps = 50/441 (11%)
Query: 6 GPPPT-IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P IGN QL+ + L K+S++YGP+F++ LG R +V+ +EA
Sbjct: 14 GPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQA 73
Query: 65 LQFSSRP-------VLSGT----QNANRTEQFRQVQIDEIFRMIEKISKLGAAPAAADD- 112
+FS R V G N R +Q R+ I + + K G ++
Sbjct: 74 EEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDF--GVGKRGIEERIQEEA 131
Query: 113 ----DYVSSEAPINLCETAM--TLIRNIIFRVGFGKRFEDESTAAVSRLH---SVFAETQ 163
D + N+ T + N+I + FG RF+ + +S L +F T
Sbjct: 132 GFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTS 191
Query: 164 AMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAE 220
G+++ + L G ++ + + +E + LDP P+
Sbjct: 192 TSTGQLY-----EMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR--- 243
Query: 221 KEDLIDVLLAEMKTADDHQTLD-HIKATIMEN----IAATDTIKVTLEWSMTNLMKNPEA 275
D ID L M+ + + + ++K +M + T+T+ TL + LMK+PE
Sbjct: 244 --DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEV 301
Query: 276 MKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVP----RETTEKCVI 331
KV +E+ V+ +D ++ Y++AV+ E RF + +P R +
Sbjct: 302 EAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRF---GDVIPMSLARRVKKDTKF 358
Query: 332 DGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRIC 391
+ +P T V + ++ RD + P +F P+ F+ + F+PF G+R C
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNC 417
Query: 392 TGLPVAMPIVELALANLLYKF 412
G +A + L ++ F
Sbjct: 418 FGEGLARMELFLFFTTVMQNF 438
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 181/441 (41%), Gaps = 50/441 (11%)
Query: 6 GPPPT-IIGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHD 64
GP P IGN QL+ + L K+S++YGP+F++ LG R +V+ +EA
Sbjct: 14 GPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQA 73
Query: 65 LQFSSRP-------VLSGT----QNANRTEQFRQVQIDEIFRMIEKISKLGAAPAAADD- 112
+FS R V G N R +Q R+ I + + K G ++
Sbjct: 74 EEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDF--GVGKRGIEERIQEEA 131
Query: 113 ----DYVSSEAPINLCETAM--TLIRNIIFRVGFGKRFEDESTAAVSRLHSV---FAETQ 163
D + N+ T + N+I + FG RF+ + +S L + F T
Sbjct: 132 GFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGSFQFTS 191
Query: 164 AMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAE 220
G+++ + L G ++ + + +E + LDP P+
Sbjct: 192 TSTGQLY-----EMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR--- 243
Query: 221 KEDLIDVLLAEMKTADDHQTLD-HIKATIMENI----AATDTIKVTLEWSMTNLMKNPEA 275
D ID L M+ + + + ++K +M + A T+T+ TL + LMK+PE
Sbjct: 244 --DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEV 301
Query: 276 MKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVP----RETTEKCVI 331
KV +E+ V+ +D ++ Y++AV+ E RF + +P R +
Sbjct: 302 EAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRF---GDVIPMGLARRVKKDTKF 358
Query: 332 DGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRIC 391
+ +P T V + ++ RD + P +F P+ F+ + F+PF G+R C
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNC 417
Query: 392 TGLPVAMPIVELALANLLYKF 412
G +A + L ++ F
Sbjct: 418 FGEGLARMELFLFFTTVMQNF 438
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 23/265 (8%)
Query: 185 LTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKED-----LIDVLLAEMKTADDHQ 239
L G ++LR + + +Q+ D + +R + E+ L +L AE DD
Sbjct: 185 LPGKRKQLRE-VRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDDEG 243
Query: 240 TLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLP 299
LD+ + IA +T L +++ L + PE + ++Q EV V+ K ++D +DL
Sbjct: 244 LLDNF---VTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLG 300
Query: 300 RLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKP 359
RL+YL V+KE+LR P A R E+ +IDG +P T +L + + +GR ++ P
Sbjct: 301 RLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDP 360
Query: 360 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDWTMPHG 419
F P+RF F + PF G R C G A V++ +A LL + ++ + G
Sbjct: 361 LTFNPDRF---GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPG 417
Query: 420 MEIEDLDYDANPGFTLHKKNPLRPV 444
F L ++ L+P+
Sbjct: 418 QR-----------FGLQEQATLKPL 431
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 4/185 (2%)
Query: 233 KTADDHQTLDHIK---ATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKD 289
K + H+ L ++ +I+ A +T L + M L +P+ +K+Q+E+ V+ +
Sbjct: 262 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN 321
Query: 290 KGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAI 349
K D + ++EYL VV ETLR P A + R + I+G IP V++ +A+
Sbjct: 322 KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYAL 381
Query: 350 GRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLL 409
RD + W +P++F+PERF N D + + PFG+G R C G+ A+ ++LAL +L
Sbjct: 382 HRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVL 440
Query: 410 YKFDW 414
F +
Sbjct: 441 QNFSF 445
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 4/185 (2%)
Query: 233 KTADDHQTLDHIK---ATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKD 289
K + H+ L ++ +I+ A +T L + M L +P+ +K+Q+E+ V+ +
Sbjct: 260 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN 319
Query: 290 KGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAI 349
K D + ++EYL VV ETLR P A + R + I+G IP V++ +A+
Sbjct: 320 KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYAL 379
Query: 350 GRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLL 409
RD + W +P++F+PERF N D + + PFG+G R C G+ A+ ++LAL +L
Sbjct: 380 HRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVL 438
Query: 410 YKFDW 414
F +
Sbjct: 439 QNFSF 443
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 4/185 (2%)
Query: 233 KTADDHQTLDHIK---ATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKD 289
K + H+ L ++ +I+ A +T L + M L +P+ +K+Q+E+ V+ +
Sbjct: 261 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN 320
Query: 290 KGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAI 349
K D + ++EYL VV ETLR P A + R + I+G IP V++ +A+
Sbjct: 321 KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYAL 380
Query: 350 GRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLL 409
RD + W +P++F+PERF N D + + PFG+G R C G+ A+ ++LAL +L
Sbjct: 381 HRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVL 439
Query: 410 YKFDW 414
F +
Sbjct: 440 QNFSF 444
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Query: 237 DHQTLDHIKATIME-NIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDE 295
DH + + A + E +AA +T +L W + NL +NP+A +++ +EV+ V+ D
Sbjct: 277 DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRA 336
Query: 296 DDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQV 355
+DL + YLKA +KE++R P+ F R + V+ Y +P T + +N +G
Sbjct: 337 EDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDN 396
Query: 356 WDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFD 413
++ +F PER++ + F +PFG G+R+C G +A + LAL ++ K+D
Sbjct: 397 FEDSHKFRPERWLQKEKKINP--FAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYD 452
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 22/262 (8%)
Query: 140 FGKRF----EDESTAAVSRLHSVFAETQAMVGRIFL-RDCLPFVG--CWLDSLTGWNRRL 192
FG+R S+A+++ LH++ ++ V +F+ R ++ W + W+
Sbjct: 179 FGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWISPKVWKEHFEAWDCIF 238
Query: 193 RNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLDHIKATIMENI 252
+ + K+YQ+L + VAE +L AE+ +L+ IKA ME
Sbjct: 239 QYGDNCIQKIYQELAFNRPQHYTGIVAEL-----LLKAEL-------SLEAIKANSMELT 286
Query: 253 AAT-DTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKET 311
A + DT L ++ L +NP+ + +++E + L L+A +KET
Sbjct: 287 AGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKET 346
Query: 312 LRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSN 371
LR P F+ R + V+ YHIPA T V V ++++GR+ ++ +P+ + P+R++ +
Sbjct: 347 LRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWL--D 404
Query: 372 IDMGGQNFEFIPFGAGRRICTG 393
I G+NF +PFG G R C G
Sbjct: 405 IRGSGRNFHHVPFGFGMRQCLG 426
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 151/309 (48%), Gaps = 34/309 (11%)
Query: 127 AMTLIRNIIFRVG--FGKRFEDESTAAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDS 184
+TL+R ++ R + +A V ++ F QA++ ++ + F WL
Sbjct: 187 VLTLLRRVMLDTSNTLFLRIPLDESAIVVKIQGYFDAWQALL----IKPDIFFKISWL-- 240
Query: 185 LTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDL-------IDVLLAEMKTADD 237
++ + D + LI + KR +++ +E L +++LAE K D
Sbjct: 241 ----YKKYEKSVKDLKDAIEVLIAE----KRRRISTEEKLEECMDFATELILAE-KRGD- 290
Query: 238 HQTLDHIKATIMEN-IAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDED 296
T +++ I+E IAA DT+ V+L + + + K+P + + KE++ V+ ++ + D
Sbjct: 291 -LTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD-IKID 348
Query: 297 DLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVW 356
D+ +L+ ++ + E++R+QP + V R+ E VIDGY + T +++N+ + R + +
Sbjct: 349 DIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFF 407
Query: 357 DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDWTM 416
KP+EF E F N+ F PFG G R C G +AM +++ L LL +F
Sbjct: 408 PKPNEFTLENF-AKNVPYR----YFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKT 462
Query: 417 PHGMEIEDL 425
G +E +
Sbjct: 463 LQGQCVESI 471
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 17/248 (6%)
Query: 180 CWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADDHQ 239
W D + W+ + YQ L + E + +L +K+ +
Sbjct: 224 TWRDHVAAWDTIFNKAEKYTEIFYQDL---------RRKTEFRNYPGILYCLLKS--EKM 272
Query: 240 TLDHIKATIMENIAA-TDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDL 298
L+ +KA I E +A +T +TL+W + + ++ + +++EV + L
Sbjct: 273 LLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKML 332
Query: 299 PRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDK 358
+ LKA +KETLR P + + R V+ Y IPAKT V V ++A+GRD +
Sbjct: 333 QMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSS 392
Query: 359 PDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDWTMPH 418
PD+F P R++ + D+ +F + FG G R C G +A + L L ++L F M H
Sbjct: 393 PDKFDPTRWLSKDKDL--IHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEMQH 450
Query: 419 GMEIEDLD 426
I D+D
Sbjct: 451 ---IGDVD 455
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 21/244 (8%)
Query: 180 CWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADDHQ 239
W D + W+ FS D +Y Q L R K + D +L + D
Sbjct: 222 TWKDHVAAWDVI----FSKAD-IYTQNFYWEL---RQKGSVHHDYRGILYRLL--GDSKM 271
Query: 240 TLDHIKATIMENIAA-TDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDL 298
+ + IKA + E +A DT +TL+W + + +N KVQ +R V + D+
Sbjct: 272 SFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN----LKVQDMLRAEVLAARHQAQGDM 327
Query: 299 PRL----EYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQ 354
+ LKA +KETLR P + + R V+ Y IPAKT V V ++A+GR+
Sbjct: 328 ATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPT 387
Query: 355 VWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDW 414
+ P+ F P R++ D F + FG G R C G +A + + L N+L F
Sbjct: 388 FFFDPENFDPTRWLSK--DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRV 445
Query: 415 TMPH 418
+ H
Sbjct: 446 EIQH 449
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 105/240 (43%), Gaps = 13/240 (5%)
Query: 180 CWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADDHQ 239
W D + W+ FS D +Y Q L R K + D +L + D
Sbjct: 219 TWKDHVAAWDVI----FSKAD-IYTQNFYWEL---RQKGSVHHDYRGILYRLL--GDSKM 268
Query: 240 TLDHIKATIMENIAA-TDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDL 298
+ + IKA + E +A DT +TL+W + + +N + ++ EV L
Sbjct: 269 SFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATML 328
Query: 299 PRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDK 358
+ LKA +KETLR P + + R V+ Y IPAKT V V ++A+GR+ +
Sbjct: 329 QLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFD 388
Query: 359 PDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDWTMPH 418
P+ F P R++ D F + FG G R C G +A + + L N+L F + H
Sbjct: 389 PENFDPTRWLSK--DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQH 446
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 161/410 (39%), Gaps = 39/410 (9%)
Query: 29 KLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHDLQFSSRPVLSG----TQNANRTEQ 84
K +Q+GPIF RL ++ I IS A + F F + LS NA T
Sbjct: 38 KRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLSTRILLGPNALAT-- 95
Query: 85 FRQVQIDEIFRMIEKISKLGAAPAAADD----------DYVSSEAPINLCETAMTLIRNI 134
Q+ EI R KI P D Y+ N +R +
Sbjct: 96 ----QMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQWGKANEV-IWYPQLRRM 150
Query: 135 IFRVGFGKRFEDESTAAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRN 194
F V F E + +L F ET + G L LP ++L G ++R R
Sbjct: 151 TFDVA-ATLFMGEKVSQNPQLFPWF-ET-YIQGLFSLPIPLP------NTLFGKSQRAR- 200
Query: 195 NFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLDHIKATIMENI-A 253
+ +E + ++ + +ED + +LLA + +L +K I+ + A
Sbjct: 201 ------ALLLAELEKIIKARQQQPPSEEDALGILLAARDDNNQPLSLPELKDQILLLLFA 254
Query: 254 ATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLR 313
+T+ L L ++ + ++V++E + + E L ++ YL V++E LR
Sbjct: 255 GHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAET-LKKMPYLDQVLQEVLR 313
Query: 314 FQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNID 373
P RE + C G+H P V + D ++ P++F PERF
Sbjct: 314 LIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSA 373
Query: 374 MGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDWTMPHGMEIE 423
F +PFG G R C G A ++L L+ +FDWT+ G +E
Sbjct: 374 THNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLE 423
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 29/236 (12%)
Query: 189 NRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADDH-------QTL 241
NRR + +D L+ D + +R +K D D+L A ++ DD+ +
Sbjct: 213 NRRFNDALADL-----HLLVDEIIAERRASGQKPD--DLLTALLEAKDDNGDPIGEQEIH 265
Query: 242 DHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRL 301
D + A + ++TI T+ W + L +PE +++ EV V + ED + +L
Sbjct: 266 DQVVAILTPG---SETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFED-VRKL 321
Query: 302 EYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWD---- 357
+ V+ E +R +PA + R + + GY IPA ++ + +AI RD + +D
Sbjct: 322 RHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLE 381
Query: 358 -KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
PD ++PER +N+ + PF AG+R C +M + L A L K+
Sbjct: 382 FDPDRWLPER--AANV----PKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKY 431
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 173/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 ------THDLQFS--------------------SRPVLSGTQNANRTEQFRQVQIDEIFR 95
+ L+F+ + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFARDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+Y+ E P ++ + I F F + D+ + +
Sbjct: 126 LVQKWERLNA------DEYI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFIISM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 IRALDEVMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I I+ IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTQML-NGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++KV +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKVAEEATRVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + V+V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 179/450 (39%), Gaps = 62/450 (13%)
Query: 1 MTLFLGPPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAK 57
MT+ P P G L L N L K++ + G IF R +SS +L K
Sbjct: 1 MTIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIK 60
Query: 58 EAFKTH--DLQFSSRP--------------------------VLSGTQNANRTEQFRQVQ 89
EA D S P +L + + + + +
Sbjct: 61 EACDESRFDKNLSQAPKFVRDLAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMM 120
Query: 90 IDEIFRMIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDEST 149
+D ++++K +L A D+++ E P ++ + I F F + D+
Sbjct: 121 VDIAVQLVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPH 172
Query: 150 AAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIED 209
++ + V A +AM LR P D N+R F + KV L++
Sbjct: 173 PFITSM--VRALDEAMNK---LRRANPD-----DPAYDENKR---QFQEDIKVMNDLVDK 219
Query: 210 HLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMENIAAT-DTIKVTLEWSM 266
+ ++ + +DL+ +L K + + LD +I+ I+ +AA + L +++
Sbjct: 220 IIADRKASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFAL 278
Query: 267 TNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETT 326
L+KNP ++K +E V+ D + +L+Y+ V+ E LR P A
Sbjct: 279 YFLVKNPHELQKAAEEAARVLVDP-VPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK 337
Query: 327 EKCVIDG-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPF 384
E V+ G Y + ++V + + RD VW D +EF PERF + F PF
Sbjct: 338 EDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPS---AIPQHAFKPF 394
Query: 385 GAGRRICTGLPVAMPIVELALANLLYKFDW 414
G G+R C G A+ L L +L FD+
Sbjct: 395 GNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 176/450 (39%), Gaps = 62/450 (13%)
Query: 1 MTLFLGPPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAK 57
MT+ P P G L L N L K++ + G IF R +SS +L K
Sbjct: 6 MTIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIK 65
Query: 58 EAFK---------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQ 89
EA TH+ + + +L + + + + +
Sbjct: 66 EACDESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMM 125
Query: 90 IDEIFRMIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDEST 149
+D ++++K +L A D+++ E P ++ + I F F + D+
Sbjct: 126 VDIAVQLVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPH 177
Query: 150 AAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIED 209
++ + E + R D N+R F + KV L++
Sbjct: 178 PFITSMVRALDEAMNKLQRTNPDD----------PAYDENKR---QFQEDIKVMNDLVDK 224
Query: 210 HLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSM 266
+ ++ + +DL+ +L K + + LD +I+ I+ IA +T L +++
Sbjct: 225 IIADRKASGEQSDDLLTHML-HGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTL 283
Query: 267 TNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETT 326
L+KNP ++K +E V+ D + +L+Y+ V+ E LR P A
Sbjct: 284 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK 342
Query: 327 EKCVIDG-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPF 384
E V+ G Y + ++V + + RD +W D +EF PERF + F PF
Sbjct: 343 EDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPF 399
Query: 385 GAGRRICTGLPVAMPIVELALANLLYKFDW 414
G G+R C G A+ L L +L FD+
Sbjct: 400 GNGQRACIGQQFALHEATLVLGMMLKHFDF 429
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 174/444 (39%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIM-ENIAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ E IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 176/450 (39%), Gaps = 62/450 (13%)
Query: 1 MTLFLGPPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAK 57
MT+ P P G L L N L K++ + G IF R +SS +L K
Sbjct: 3 MTIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIK 62
Query: 58 EAFK---------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQ 89
EA TH+ + + +L + + + + +
Sbjct: 63 EACDESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMM 122
Query: 90 IDEIFRMIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDEST 149
+D ++++K +L A D+++ E P ++ + I F F + D+
Sbjct: 123 VDIAVQLVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPH 174
Query: 150 AAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIED 209
++ + E + R D N+R F + KV L++
Sbjct: 175 PFITSMVRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDK 221
Query: 210 HLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSM 266
+ ++ + +DL+ +L K + + LD +I+ I+ IA +T L +++
Sbjct: 222 IIADRKASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 280
Query: 267 TNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETT 326
L+KNP ++K +E V+ D + +L+Y+ V+ E LR P A
Sbjct: 281 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK 339
Query: 327 EKCVIDG-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPF 384
E V+ G Y + ++V + + RD +W D +EF PERF + F PF
Sbjct: 340 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPF 396
Query: 385 GAGRRICTGLPVAMPIVELALANLLYKFDW 414
G G+R C G A+ L L +L FD+
Sbjct: 397 GNGQRACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 176/450 (39%), Gaps = 62/450 (13%)
Query: 1 MTLFLGPPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAK 57
MT+ P P G L L N L K++ + G IF R +SS +L K
Sbjct: 1 MTIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIK 60
Query: 58 EAFK---------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQ 89
EA TH+ + + +L + + + + +
Sbjct: 61 EACDESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMM 120
Query: 90 IDEIFRMIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDEST 149
+D ++++K +L A D+++ E P ++ + I F F + D+
Sbjct: 121 VDIAVQLVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPH 172
Query: 150 AAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIED 209
++ + E + R D N+R F + KV L++
Sbjct: 173 PFITSMVRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDK 219
Query: 210 HLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSM 266
+ ++ + +DL+ +L K + + LD +I+ I+ IA +T L +++
Sbjct: 220 IIADRKASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 278
Query: 267 TNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETT 326
L+KNP ++K +E V+ D + +L+Y+ V+ E LR P A
Sbjct: 279 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK 337
Query: 327 EKCVIDG-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPF 384
E V+ G Y + ++V + + RD +W D +EF PERF + F PF
Sbjct: 338 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPF 394
Query: 385 GAGRRICTGLPVAMPIVELALANLLYKFDW 414
G G+R C G A+ L L +L FD+
Sbjct: 395 GNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 176/450 (39%), Gaps = 62/450 (13%)
Query: 1 MTLFLGPPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAK 57
MT+ P P G L L N L K++ + G IF R +SS +L K
Sbjct: 1 MTIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIK 60
Query: 58 EAFK---------------------------THDLQF-SSRPVLSGTQNANRTEQFRQVQ 89
EA TH+ + + +L + + + + +
Sbjct: 61 EAADESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWCKAHNILLPSFSQQAMKGYHAMM 120
Query: 90 IDEIFRMIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDEST 149
+D ++++K +L A D+++ E P ++ + I F F + D+
Sbjct: 121 VDIAVQLVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLSGFNYRFNSFYRDQPH 172
Query: 150 AAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIED 209
++ + E + R D N+R F + KV L++
Sbjct: 173 PFITSMVRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDK 219
Query: 210 HLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSM 266
+ ++ + +DL+ +L K + + LD +I+ I+ IA +T L +++
Sbjct: 220 IIADRKASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 278
Query: 267 TNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETT 326
L+KNP ++K +E V+ D + +L+Y+ V+ E LR P A
Sbjct: 279 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK 337
Query: 327 EKCVIDG-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPF 384
E V+ G Y + ++V + + RD +W D +EF PERF + F PF
Sbjct: 338 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPF 394
Query: 385 GAGRRICTGLPVAMPIVELALANLLYKFDW 414
G G+R C G A+ L L +L FD+
Sbjct: 395 GNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 176/450 (39%), Gaps = 62/450 (13%)
Query: 1 MTLFLGPPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAK 57
MT+ P P G L L N L K++ + G IF R +SS +L K
Sbjct: 1 MTIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIK 60
Query: 58 EAFK---------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQ 89
EA TH+ + + +L + + + + +
Sbjct: 61 EACDESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMM 120
Query: 90 IDEIFRMIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDEST 149
+D ++++K +L A D+++ E P ++ + I F F + D+
Sbjct: 121 VDIAVQLVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPH 172
Query: 150 AAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIED 209
++ + E + R D N+R F + KV L++
Sbjct: 173 PFITSMVRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDK 219
Query: 210 HLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSM 266
+ ++ + +DL+ +L K + + LD +I+ I+ IA +T L +++
Sbjct: 220 IIADRKASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 278
Query: 267 TNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETT 326
L+KNP ++K +E V+ D + +L+Y+ V+ E LR P A
Sbjct: 279 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK 337
Query: 327 EKCVIDG-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPF 384
E V+ G Y + ++V + + RD +W D +EF PERF + F PF
Sbjct: 338 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPF 394
Query: 385 GAGRRICTGLPVAMPIVELALANLLYKFDW 414
G G+R C G A+ L L +L FD+
Sbjct: 395 GNGQRACPGQQFALHEATLVLGMMLKHFDF 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 176/450 (39%), Gaps = 62/450 (13%)
Query: 1 MTLFLGPPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAK 57
MT+ P P G L L N L K++ + G IF R +SS +L K
Sbjct: 1 MTIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIK 60
Query: 58 EAFK---------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQ 89
EA TH+ + + +L + + + + +
Sbjct: 61 EACDESRFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMM 120
Query: 90 IDEIFRMIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDEST 149
+D ++++K +L A D+++ E P ++ + I F F + D+
Sbjct: 121 VDIAVQLVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPH 172
Query: 150 AAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIED 209
++ + E + R D N+R F + KV L++
Sbjct: 173 PFITSMVRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDK 219
Query: 210 HLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSM 266
+ ++ + +DL+ +L K + + LD +I+ I+ IA ++ L +++
Sbjct: 220 IIADRKASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFAL 278
Query: 267 TNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETT 326
L+KNP ++K +E V+ D + +L+Y+ V+ E LR P A
Sbjct: 279 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK 337
Query: 327 EKCVIDG-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPF 384
E V+ G Y + ++V + + RD +W D +EF PERF + F PF
Sbjct: 338 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPF 394
Query: 385 GAGRRICTGLPVAMPIVELALANLLYKFDW 414
G G+R C G A+ L L +L FD+
Sbjct: 395 GNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 176/450 (39%), Gaps = 62/450 (13%)
Query: 1 MTLFLGPPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAK 57
MT+ P P G L L N L K++ + G IF R +SS +L K
Sbjct: 1 MTIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIK 60
Query: 58 EAFK---------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQ 89
EA TH+ + + +L + + + + +
Sbjct: 61 EACDESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMM 120
Query: 90 IDEIFRMIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDEST 149
+D ++++K +L A D+++ E P ++ + I F F + D+
Sbjct: 121 VDIAVQLVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPH 172
Query: 150 AAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIED 209
++ + E + R D N+R F + KV L++
Sbjct: 173 PFITSMVRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDK 219
Query: 210 HLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSM 266
+ ++ + +DL+ +L K + + LD +I+ I+ IA +T L +++
Sbjct: 220 IIADRKASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 278
Query: 267 TNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETT 326
L+KNP ++K +E V+ D + +L+Y+ V+ E LR P A
Sbjct: 279 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAK 337
Query: 327 EKCVIDG-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPF 384
E V+ G Y + ++V + + RD +W D +EF PERF + F PF
Sbjct: 338 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPF 394
Query: 385 GAGRRICTGLPVAMPIVELALANLLYKFDW 414
G G+R C G A+ L L +L FD+
Sbjct: 395 GNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 173/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFFGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 176/450 (39%), Gaps = 62/450 (13%)
Query: 1 MTLFLGPPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAK 57
MT+ P P G L L N L K++ + G IF R +SS +L K
Sbjct: 3 MTIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIK 62
Query: 58 EAFK---------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQ 89
EA TH+ + + +L + + + + +
Sbjct: 63 EACDESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMM 122
Query: 90 IDEIFRMIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDEST 149
+D ++++K +L A D+++ E P ++ + I F F + D+
Sbjct: 123 VDIAVQLVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPH 174
Query: 150 AAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIED 209
++ + E + R D N+R F + KV L++
Sbjct: 175 PFITSMVRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDK 221
Query: 210 HLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSM 266
+ ++ + +DL+ +L K + + LD +I+ I+ IA +T L +++
Sbjct: 222 IIADRKASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 280
Query: 267 TNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETT 326
L+KNP ++K +E V+ D + +L+Y+ V+ E LR P +
Sbjct: 281 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAK 339
Query: 327 EKCVIDG-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPF 384
E V+ G Y + ++V + + RD +W D +EF PERF + F PF
Sbjct: 340 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPF 396
Query: 385 GAGRRICTGLPVAMPIVELALANLLYKFDW 414
G G+R C G A+ L L +L FD+
Sbjct: 397 GNGQRACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 173/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 173/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 173/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 173/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTH 63
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 64 ------------------DLQFSS----------RPVLSGTQNANRTEQFRQVQIDEIFR 95
D +F+S +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGEFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 173/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 173/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA ++ L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 173/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA ++ L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 176/444 (39%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTH 63
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 64 --DLQFSSRP--------------------------VLSGTQNANRTEQFRQVQIDEIFR 95
D S P +L + + + + + +D +
Sbjct: 66 RFDKNLSQAPKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
V A +AM LR P D N+R F + KV L++ + ++
Sbjct: 178 --VRALDEAMNK---LRRANPD-----DPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMENIAAT-DTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ +AA + L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHELQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 173/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGKQFALHEATLVLGMMLKHFDF 423
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 173/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 175/450 (38%), Gaps = 62/450 (13%)
Query: 1 MTLFLGPPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAK 57
MT+ P P G L L N L K++ + G IF R +SS +L K
Sbjct: 3 MTIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIK 62
Query: 58 EAFK---------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQ 89
EA TH+ + + +L + + + + +
Sbjct: 63 EACDESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMM 122
Query: 90 IDEIFRMIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDEST 149
+D ++++K +L A D+++ E P ++ + I F F + D+
Sbjct: 123 VDIAVQLVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPH 174
Query: 150 AAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIED 209
++ + E + R D N+R F + KV L++
Sbjct: 175 PFITSMVRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDK 221
Query: 210 HLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSM 266
+ ++ + +DL+ +L K + + LD +I+ I+ IA +T L +++
Sbjct: 222 IIADRKASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 280
Query: 267 TNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETT 326
L+KNP ++K +E V+ D + +L+Y+ V+ E LR P
Sbjct: 281 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAK 339
Query: 327 EKCVIDG-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPF 384
E V+ G Y + ++V + + RD +W D +EF PERF + F PF
Sbjct: 340 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPF 396
Query: 385 GAGRRICTGLPVAMPIVELALANLLYKFDW 414
G G+R C G A+ L L +L FD+
Sbjct: 397 GNGQRACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 173/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CEGQQFALHEATLVLGMMLKHFDF 423
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 175/450 (38%), Gaps = 62/450 (13%)
Query: 1 MTLFLGPPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAK 57
MT+ P P G L L N L K++ + G IF R ISS +L K
Sbjct: 1 MTIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYISSQRLVK 60
Query: 58 EAFK---------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQ 89
EA TH+ + +R +L + + + +
Sbjct: 61 EACDESRFDKNLSQARKFVRDFAGDGLATSWTHEKNWKKARNILLPRLSQQAMKGYHAMM 120
Query: 90 IDEIFRMIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDEST 149
+D ++++K +L + D+++ E P ++ + I F + D+
Sbjct: 121 VDIAVQLVQKWERLNS------DEHI--EVPEDMTRLTLDTIGLCGFNYRINSFYRDQPH 172
Query: 150 AAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIED 209
++ + E + R D N+R F + KV L++
Sbjct: 173 PFITSMVRALDEVMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDK 219
Query: 210 HLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSM 266
+ ++ + +DL+ +L K + + LD +I+ I+ IA +T L +++
Sbjct: 220 IIADRKASGEQSDDLLTHML-HGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFAL 278
Query: 267 TNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETT 326
L+KNP ++K +E V+ D + +L+Y+ V+ E LR P A
Sbjct: 279 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAK 337
Query: 327 EKCVIDG-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPF 384
E ++ G Y + ++V + + RD VW D +EF PERF + F PF
Sbjct: 338 EDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPS---AIPQHAFKPF 394
Query: 385 GAGRRICTGLPVAMPIVELALANLLYKFDW 414
G G+R C G A+ L L +L FD+
Sbjct: 395 GNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 173/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F P+G G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPYGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 175/450 (38%), Gaps = 62/450 (13%)
Query: 1 MTLFLGPPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAK 57
MT+ P P G L L N L K++ + G IF R +SS +L K
Sbjct: 1 MTIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIK 60
Query: 58 EAFK---------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQ 89
EA TH+ + + +L + + + + +
Sbjct: 61 EACDESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMM 120
Query: 90 IDEIFRMIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDEST 149
+D ++++K +L A D+++ E P ++ + I F F + D+
Sbjct: 121 VDIAVQLVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPH 172
Query: 150 AAVSRLHSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIED 209
++ + E + R D N+R F + KV L++
Sbjct: 173 PFITSMVRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDK 219
Query: 210 HLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMENIAAT-DTIKVTLEWSM 266
+ ++ + +DL+ +L K + + LD +I+ I+ +AA + L +++
Sbjct: 220 IIADRKASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFAL 278
Query: 267 TNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETT 326
L+KNP ++K +E V+ D + +L+Y+ V+ E LR P
Sbjct: 279 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAK 337
Query: 327 EKCVIDG-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPF 384
E V+ G Y + ++V + + RD +W D +EF PERF + F PF
Sbjct: 338 EDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPF 394
Query: 385 GAGRRICTGLPVAMPIVELALANLLYKFDW 414
G G+R C G A+ L L +L FD+
Sbjct: 395 GNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 172/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA + L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 172/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA + L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 172/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ I +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 172/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA + L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 172/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ I +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 172/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ I +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 172/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ I +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 172/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA + L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 172/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ I +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 172/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ I +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 173/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F P+G G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPWGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 172/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMENIAAT-DTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ +AA + L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F PFG G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPFGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 172/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F P G G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPHGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 172/444 (38%), Gaps = 62/444 (13%)
Query: 7 PPPTIIGNLHQLDATNL---AFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFK-- 61
P P G L L N L K++ + G IF R +SS +L KEA
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 62 -------------------------THDLQFS-SRPVLSGTQNANRTEQFRQVQIDEIFR 95
TH+ + + +L + + + + + +D +
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQ 125
Query: 96 MIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRL 155
+++K +L A D+++ E P ++ + I F F + D+ ++ +
Sbjct: 126 LVQKWERLNA------DEHI--EVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSM 177
Query: 156 HSVFAETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR 215
E + R D N+R F + KV L++ + ++
Sbjct: 178 VRALDEAMNKLQR----------ANPDDPAYDENKR---QFQEDIKVMNDLVDKIIADRK 224
Query: 216 PKVAEKEDLIDVLLAEMKTADDHQTLD--HIKATIMEN-IAATDTIKVTLEWSMTNLMKN 272
+ +DL+ +L K + + LD +I+ I+ IA +T L +++ L+KN
Sbjct: 225 ASGEQSDDLLTHML-NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 273 PEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
P ++K +E V+ D + +L+Y+ V+ E LR P A E V+
Sbjct: 284 PHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 333 G-YHIPAKTTVLVNVWAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 390
G Y + ++V + + RD +W D +EF PERF + F P G G+R
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKPAGNGQRA 399
Query: 391 CTGLPVAMPIVELALANLLYKFDW 414
C G A+ L L +L FD+
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 216 PKVAEKEDLIDVLLA-EMKTADDHQTLDHIKATIMENI-AATDTIKVTLEWSMTNLMKNP 273
P D++DVL+A + +T + D I + + A T T W++ LM++
Sbjct: 217 PTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHR 276
Query: 274 EAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDG 333
+A V E+ + D V L ++ L+ V+KETLR P + R + + G
Sbjct: 277 DAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQG 336
Query: 334 YHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTG 393
+ I V + R + + P +F+P R+ + + +IPFGAGR C G
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
Query: 394 LPVAMPIVELALANLLYKFDWTM 416
A+ ++ + LL ++++ M
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEM 419
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 216 PKVAEKEDLIDVLLA-EMKTADDHQTLDHIKATIMENI-AATDTIKVTLEWSMTNLMKNP 273
P D++DVL+A + +T + D I + + A T T W++ LM++
Sbjct: 217 PTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHR 276
Query: 274 EAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDG 333
+A V E+ + D V L ++ L+ V+KETLR P + R + + G
Sbjct: 277 DAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQG 336
Query: 334 YHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTG 393
+ I V + R + + P +F+P R+ + + +IPFGAGR C G
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
Query: 394 LPVAMPIVELALANLLYKFDWTM 416
A+ ++ + LL ++++ M
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 216 PKVAEKEDLIDVLLA-EMKTADDHQTLDHIKATIMENI-AATDTIKVTLEWSMTNLMKNP 273
P D++DVL+A + +T + D I + + A T T W++ LM++
Sbjct: 217 PTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHR 276
Query: 274 EAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDG 333
+A V E+ + D V L ++ L+ V+KETLR P + R + + G
Sbjct: 277 DAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQG 336
Query: 334 YHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTG 393
+ I V + R + + P +F+P R+ + + +IPFGAGR C G
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
Query: 394 LPVAMPIVELALANLLYKFDWTM 416
A+ ++ + LL ++++ M
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 216 PKVAEKEDLIDVLLA-EMKTADDHQTLDHIKATIMENI-AATDTIKVTLEWSMTNLMKNP 273
P D++DVL+A + +T + D I + + A T T W++ LM++
Sbjct: 217 PTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHR 276
Query: 274 EAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDG 333
+A V E+ + D V L ++ L+ V+KETLR P + R + + G
Sbjct: 277 DAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQG 336
Query: 334 YHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTG 393
+ I V + R + + P +F+P R+ + + +IPFGAGR C G
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
Query: 394 LPVAMPIVELALANLLYKFDWTM 416
A+ ++ + LL ++++ M
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEM 419
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 100/246 (40%), Gaps = 20/246 (8%)
Query: 179 GCWLDSLTGW------NRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEK-EDLIDVLLAE 231
WL L GW RR R + D Y+ + KR + EK +D++ LL
Sbjct: 189 AAWL--LPGWLPLPSFRRRDRAHREIKDIFYKAI------QKRRQSQEKIDDILQTLLDA 240
Query: 232 MKTADDHQTLDHIKATIMENI-AATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDK 290
T D + ++ + A T T W L ++ KK E + V +
Sbjct: 241 TYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN 300
Query: 291 -GFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAI 349
+ D L L L +KETLR +P + R + GY IP V V+
Sbjct: 301 LPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVN 360
Query: 350 GRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANL- 408
R W + +F P+R++ N G+ F ++PFGAGR C G A ++ + +
Sbjct: 361 QRLKDSWVERLDFNPDRYLQDN-PASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTML 419
Query: 409 -LYKFD 413
LY+FD
Sbjct: 420 RLYEFD 425
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 21/197 (10%)
Query: 214 KRPKVAEKEDLIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNP 273
K +V DLI +L D + + +AAT+ TL + +L+ NP
Sbjct: 230 KERRVNPGSDLISILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNP 289
Query: 274 EAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDG 333
E M V D +PR + ETLR++P + +PR+ ++ V+ G
Sbjct: 290 EQMNDV------------LADRSLVPR------AIAETLRYKPPVQLIPRQLSQDTVVGG 331
Query: 334 YHIPAKTTVLVNVWAIGRDGQVWDKPDEF-IPERFVGSNIDMGGQNFEFIPFGAGRRICT 392
I T V + A RD + +++PD F I +G G + FG+G C
Sbjct: 332 MEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAA-RHLAFGSGIHNCV 390
Query: 393 GLPVAMPIVELALANLL 409
G A +E+ +AN++
Sbjct: 391 GTAFAKNEIEI-VANIV 406
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 304 LKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIG--RDGQVWDKPDE 361
+ A+V+E LR++P + R TT+ + G IPA V+VN W + RD D PD
Sbjct: 274 IPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPDR 331
Query: 362 FIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
F P R G + FG G C G P+A +AL ++ +F
Sbjct: 332 FDPSRKSGGAAQLS--------FGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 304 LKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIG--RDGQVWDKPDE 361
+ A+V+E LR++P + R TT+ + G IPA V+VN W + RD D PD
Sbjct: 294 IPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPDR 351
Query: 362 FIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
F P R G + FG G C G P+A +AL ++ +F
Sbjct: 352 FDPSRKSGGAAQLS--------FGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 308 VKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERF 367
V+E R+ P F+ + V + T+VL++++ D ++WD PDEF PERF
Sbjct: 280 VQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERF 339
Query: 368 VGSNIDMGGQNFEFIPFGAGR----RICTGLPVAMPIVELALANLLYKFDWTMP 417
++ F+ IP G G C G + + +++ +L L+++ ++ +P
Sbjct: 340 AEREENL----FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVP 389
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 26/322 (8%)
Query: 112 DDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTA-AVSRLHSVFAETQAMVGRIF 170
+++ E INL E +I N + FG+ A ++L S E+ + +F
Sbjct: 133 ENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKM-ESSLIPAAVF 191
Query: 171 LRDCLPFVGCWLDSLT-GWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLL 229
+ WL L + R R ++ K+ ++I + K DL+ LL
Sbjct: 192 MP--------WLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLL 243
Query: 230 AEMKTADDHQTLDHIKATIMENI-AATDTIKVTLEWSMTNLM--KNPEAMKKVQKEVRCV 286
+ +L + I+ + A T +T WSM +LM KN + + K+ KE+
Sbjct: 244 KAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEF 303
Query: 287 VKDKGFVD-EDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVN 345
+ + D++P + + V+E++R P V R + + Y +P + +
Sbjct: 304 PAQLNYDNVMDEMP---FAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACS 360
Query: 346 VWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELAL 405
D + + P + PER +D FI FGAG C G A+ V+ L
Sbjct: 361 PLLSHHDEEAFPNPRLWDPER--DEKVDGA-----FIGFGAGVHKCIGQKFALLQVKTIL 413
Query: 406 ANLLYKFDWTMPHGMEIEDLDY 427
A ++D+ + E+ D DY
Sbjct: 414 ATAFREYDFQLLRD-EVPDPDY 434
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 26/322 (8%)
Query: 112 DDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTA-AVSRLHSVFAETQAMVGRIF 170
+++ E INL E +I N + FG+ A ++L S E+ + +F
Sbjct: 127 ENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKM-ESSLIPAAVF 185
Query: 171 LRDCLPFVGCWLDSLT-GWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLL 229
+ WL L + R R ++ K+ ++I + K DL+ LL
Sbjct: 186 MP--------WLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLL 237
Query: 230 AEMKTADDHQTLDHIKATIMENI-AATDTIKVTLEWSMTNLM--KNPEAMKKVQKEVRCV 286
+ +L + I+ + A T +T WSM +LM KN + + K+ KE+
Sbjct: 238 KAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEF 297
Query: 287 VKDKGFVD-EDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVN 345
+ + D++P + + V+E++R P V R + + Y +P + +
Sbjct: 298 PAQLNYDNVMDEMP---FAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACS 354
Query: 346 VWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELAL 405
D + + P + PER +D FI FGAG C G A+ V+ L
Sbjct: 355 PLLSHHDEEAFPNPRLWDPER--DEKVDGA-----FIGFGAGVHKCIGQKFALLQVKTIL 407
Query: 406 ANLLYKFDWTMPHGMEIEDLDY 427
A ++D+ + E+ D DY
Sbjct: 408 ATAFREYDFQLLRD-EVPDPDY 428
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 115/268 (42%), Gaps = 44/268 (16%)
Query: 194 NNFSDCDKVYQQLIED---HL----DPKRPKVAE---------KEDLIDVLLAEMKTADD 237
+NF DKV+ L+ H+ R K+AE +E + +++ M D
Sbjct: 190 DNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELISLRMFLNDT 249
Query: 238 HQTLDHIKATIMENI----AATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKG-- 291
T D ++ + + +TI T WS+ +++NPEAMK +EV+ +++ G
Sbjct: 250 LSTFDDLEKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQK 308
Query: 292 --------FVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVI---DG-YHIPAK 339
+ + +L L L +++KE+LR A+ + R E + DG Y+I
Sbjct: 309 VSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKD 367
Query: 340 TTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQ--------NFEFIPFGAGRRIC 391
+ + + D +++ P F +R++ N + ++PFG+G IC
Sbjct: 368 DIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATIC 427
Query: 392 TGLPVAMPIVELALANLLYKFDWTMPHG 419
G A+ ++ L +L F+ + G
Sbjct: 428 PGRLFAIHEIKQFLILMLSYFELELIEG 455
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 115/268 (42%), Gaps = 44/268 (16%)
Query: 194 NNFSDCDKVYQQLIED---HL----DPKRPKVAE---------KEDLIDVLLAEMKTADD 237
+NF DKV+ L+ H+ R K+AE +E + +++ M D
Sbjct: 190 DNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELISLRMFLNDT 249
Query: 238 HQTLDHIKATIMENI----AATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKG-- 291
T D ++ + + +TI T WS+ +++NPEAMK +EV+ +++ G
Sbjct: 250 LSTFDDLEKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQK 308
Query: 292 --------FVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVI---DG-YHIPAK 339
+ + +L L L +++KE+LR A+ + R E + DG Y+I
Sbjct: 309 VSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKD 367
Query: 340 TTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQ--------NFEFIPFGAGRRIC 391
+ + + D +++ P F +R++ N + ++PFG+G IC
Sbjct: 368 DIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATIC 427
Query: 392 TGLPVAMPIVELALANLLYKFDWTMPHG 419
G A+ ++ L +L F+ + G
Sbjct: 428 PGRLFAIHEIKQFLILMLSYFELELIEG 455
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 26/322 (8%)
Query: 112 DDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDESTA-AVSRLHSVFAETQAMVGRIF 170
+++ E INL E +I N + FG+ A ++L S E+ + +F
Sbjct: 142 ENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKM-ESSLIPAAVF 200
Query: 171 LRDCLPFVGCWLDSLT-GWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLL 229
+ WL L + R R ++ K+ ++I + K DL+ LL
Sbjct: 201 MP--------WLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLL 252
Query: 230 AEMKTADDHQTLDHIKATIMENI-AATDTIKVTLEWSMTNLM--KNPEAMKKVQKEVRCV 286
+ +L + I+ + A T +T WSM +LM KN + + K+ KE+
Sbjct: 253 KAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEF 312
Query: 287 VKDKGFVD-EDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVN 345
+ + D++P + + V+E++R P V R + + Y +P + +
Sbjct: 313 PAQLNYDNVMDEMP---FAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACS 369
Query: 346 VWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELAL 405
D + + P + PER +D FI FGAG C G A+ V+ L
Sbjct: 370 PLLSHHDEEAFPNPRLWDPER--DEKVDGA-----FIGFGAGVHKCIGQKFALLQVKTIL 422
Query: 406 ANLLYKFDWTMPHGMEIEDLDY 427
A ++D+ + E+ D DY
Sbjct: 423 ATAFREYDFQLLRD-EVPDPDY 443
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 30/192 (15%)
Query: 222 EDLIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPE-AMKKVQ 280
EDL+ L+A ++ + D T D I IA + + + + NL+ N AM +
Sbjct: 225 EDLMSGLVA-VEESGDQLTEDEI-------IATCNLLLIAGHETTVNLIANAALAMLRTP 276
Query: 281 KEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKT 340
+ + D AV++ET+R+ P + V R + I + +P
Sbjct: 277 GQWAALAADGSRA-----------SAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGD 325
Query: 341 TVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPI 400
T+L+ + A RD + PD F P+R + FG G C G P+A
Sbjct: 326 TMLLLLAAAHRDPTIVGAPDRFDPDR----------AQIRHLGFGKGAHFCLGAPLARLE 375
Query: 401 VELALANLLYKF 412
+AL L +F
Sbjct: 376 ATVALPALAARF 387
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 33/199 (16%)
Query: 217 KVAEKED-LIDVLLA-EMKTAD-DHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNP 273
K AE ED L+D L+A +++ D DH + I ++ +A +T + L+++P
Sbjct: 206 KQAEPEDGLLDELIARQLEEGDLDHDEVVMIALVLL--VAGHETTVNAIALGALTLIQHP 263
Query: 274 EAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDG 333
E ++ +++D G V VV+E LRF ++ + R E + G
Sbjct: 264 E-------QIDVLLRDPGAV-----------SGVVEELLRFTSVSDHIVRMAKEDIEVGG 305
Query: 334 YHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTG 393
I A VLV++ + RD + ++ PD F R ++ FG G C G
Sbjct: 306 ATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNARHHVG----------FGHGIHQCLG 355
Query: 394 LPVAMPIVELALANLLYKF 412
+A +E+AL L +
Sbjct: 356 QNLARAELEIALGGLFARI 374
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 125/316 (39%), Gaps = 26/316 (8%)
Query: 118 EAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMVGRIFLRDCLPF 177
E INL E T+I N + FG+ A R + A+ ++ L F
Sbjct: 135 EGEINLLEDCSTMIINTACQCLFGEDLRKRLDA--RRFAQLLAKMESS-----LIPAAVF 187
Query: 178 VGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADD 237
+ L + R ++ K+ ++I + + K + DL+ LL+ +
Sbjct: 188 LPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGT 247
Query: 238 HQTLDHIKATIMENI-AATDTIKVTLEWSMTNLM-----KNPEAMKKVQKEVRCVVKDKG 291
+L + I+ + A T +T WSM +LM K+ EA++K +E +
Sbjct: 248 PMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNN 307
Query: 292 FVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGR 351
+DE + + + +E++R P + R+ + Y +P + +
Sbjct: 308 VMDE-----MPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 362
Query: 352 DGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYK 411
D + + +P + PER + + G FI FGAG C G + V+ LA
Sbjct: 363 DEEAFPEPRRWDPER----DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRS 415
Query: 412 FDWTMPHGMEIEDLDY 427
+D+ + E+ D DY
Sbjct: 416 YDFQLLRD-EVPDPDY 430
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 125/316 (39%), Gaps = 26/316 (8%)
Query: 118 EAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMVGRIFLRDCLPF 177
E INL E T+I N + FG+ A R + A+ ++ L F
Sbjct: 135 EGEINLLEDCSTMIINTACQCLFGEDLRKRLDA--RRFAQLLAKMESS-----LIPAAVF 187
Query: 178 VGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADD 237
+ L + R ++ K+ ++I + + K + DL+ LL+ +
Sbjct: 188 LPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGT 247
Query: 238 HQTLDHIKATIMENI-AATDTIKVTLEWSMTNLM-----KNPEAMKKVQKEVRCVVKDKG 291
+L + I+ + A T +T WSM +LM K+ EA++K +E +
Sbjct: 248 PMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNN 307
Query: 292 FVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGR 351
+DE + + + +E++R P + R+ + Y +P + +
Sbjct: 308 VMDE-----MPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 362
Query: 352 DGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYK 411
D + + +P + PER + + G FI FGAG C G + V+ LA
Sbjct: 363 DEEAFPEPRRWDPER----DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRS 415
Query: 412 FDWTMPHGMEIEDLDY 427
+D+ + E+ D DY
Sbjct: 416 YDFQLLRD-EVPDPDY 430
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 125/316 (39%), Gaps = 26/316 (8%)
Query: 118 EAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMVGRIFLRDCLPF 177
E INL E T+I N + FG+ A R + A+ ++ L F
Sbjct: 136 EGEINLLEDCSTMIINTACQCLFGEDLRKRLDA--RRFAQLLAKMESS-----LIPAAVF 188
Query: 178 VGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADD 237
+ L + R ++ K+ ++I + + K + DL+ LL+ +
Sbjct: 189 LPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGT 248
Query: 238 HQTLDHIKATIMENI-AATDTIKVTLEWSMTNLM-----KNPEAMKKVQKEVRCVVKDKG 291
+L + I+ + A T +T WSM +LM K+ EA++K +E +
Sbjct: 249 PMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNN 308
Query: 292 FVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGR 351
+DE + + + +E++R P + R+ + Y +P + +
Sbjct: 309 VMDE-----MPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 363
Query: 352 DGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYK 411
D + + +P + PER + + G FI FGAG C G + V+ LA
Sbjct: 364 DEEAFPEPRRWDPER----DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRS 416
Query: 412 FDWTMPHGMEIEDLDY 427
+D+ + E+ D DY
Sbjct: 417 YDFQLLRD-EVPDPDY 431
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 125/316 (39%), Gaps = 26/316 (8%)
Query: 118 EAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMVGRIFLRDCLPF 177
E INL E T+I N + FG+ A R + A+ ++ L F
Sbjct: 148 EGEINLLEDCSTMIINTACQCLFGEDLRKRLDA--RRFAQLLAKMESS-----LIPAAVF 200
Query: 178 VGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADD 237
+ L + R ++ K+ ++I + + K + DL+ LL+ +
Sbjct: 201 LPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGT 260
Query: 238 HQTLDHIKATIMENI-AATDTIKVTLEWSMTNLM-----KNPEAMKKVQKEVRCVVKDKG 291
+L + I+ + A T +T WSM +LM K+ EA++K +E +
Sbjct: 261 PMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNN 320
Query: 292 FVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGR 351
+DE + + + +E++R P + R+ + Y +P + +
Sbjct: 321 VMDE-----MPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 375
Query: 352 DGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYK 411
D + + +P + PER + + G FI FGAG C G + V+ LA
Sbjct: 376 DEEAFPEPRRWDPER----DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRS 428
Query: 412 FDWTMPHGMEIEDLDY 427
+D+ + E+ D DY
Sbjct: 429 YDFQLLRD-EVPDPDY 443
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 125/316 (39%), Gaps = 26/316 (8%)
Query: 118 EAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMVGRIFLRDCLPF 177
E INL E T+I N + FG+ A R + A+ ++ L F
Sbjct: 134 EGEINLLEDCSTMIINTACQCLFGEDLRKRLDA--RRFAQLLAKMESS-----LIPAAVF 186
Query: 178 VGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADD 237
+ L + R ++ K+ ++I + + K + DL+ LL+ +
Sbjct: 187 LPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGT 246
Query: 238 HQTLDHIKATIMENI-AATDTIKVTLEWSMTNLM-----KNPEAMKKVQKEVRCVVKDKG 291
+L + I+ + A T +T WSM +LM K+ EA++K +E +
Sbjct: 247 PMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNN 306
Query: 292 FVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGR 351
+DE + + + +E++R P + R+ + Y +P + +
Sbjct: 307 VMDE-----MPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 361
Query: 352 DGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYK 411
D + + +P + PER + + G FI FGAG C G + V+ LA
Sbjct: 362 DEEAFPEPRRWDPER----DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRS 414
Query: 412 FDWTMPHGMEIEDLDY 427
+D+ + E+ D DY
Sbjct: 415 YDFQLLRD-EVPDPDY 429
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/424 (18%), Positives = 160/424 (37%), Gaps = 37/424 (8%)
Query: 12 IGNLHQLDATNLAFCLWKLSKQYGPIFSLRLGLRSAIVISSAKLAKEAFKTHDLQFSSRP 71
+G++ Q L F L K K+YG IF++ + V+ + F + S R
Sbjct: 15 VGHIIQFGKDPLGFML-KAKKKYGGIFTMNICGNRITVVGDVHQHSKFFTPRNEILSPRE 73
Query: 72 VLS--------GTQNANRTEQFRQVQIDEIFRMIEKISKLGAAPAAADD-------DYVS 116
V S G A + R+ Q++ + + AP+ + ++
Sbjct: 74 VYSFMVPVFGEGVAYAAPYPRMRE-QLNFLAEELTVAKFQNFAPSIQHEVRKFMKANWNK 132
Query: 117 SEAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMVGRIFLRDCLP 176
E IN+ + +I N + FG+ A E+ + +FL
Sbjct: 133 DEGEINILDDCSAMIINTACQCLFGEDLRKRLDARQFAQLLAKMESCLIPAAVFLP---- 188
Query: 177 FVGCWLDSLT-GWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTA 235
W+ L + R R+ ++ + ++I + K DL+ LL +
Sbjct: 189 ----WILKLPLPQSYRCRDARAELQDILSEIIIAREKEEAQKDTNTSDLLAGLLGAVYRD 244
Query: 236 DDHQTLDHIKATIMENI-AATDTIKVTLEWSMTNLM--KNPEAMKKVQKEVRCVVKDKGF 292
+ + I+ + A T +T WS+ +LM +N + K+ +E+ +
Sbjct: 245 GTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQLNY 304
Query: 293 VDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRD 352
++ + + + + +E++R P + R+ + + Y +P + + +D
Sbjct: 305 --DNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQD 362
Query: 353 GQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
+ + P E+ PER +M + F FGAG C G + V+ LA +L +
Sbjct: 363 EEAFPNPREWNPER------NMKLVDGAFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDY 416
Query: 413 DWTM 416
D+ +
Sbjct: 417 DFEL 420
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 123/316 (38%), Gaps = 26/316 (8%)
Query: 118 EAPINLCETAMTLIRNIIFRVGFGKRFEDESTAAVSRLHSVFAETQAMVGRIFLRDCLPF 177
E INL E T+I N + FG+ A R + A+ ++ L F
Sbjct: 148 EGEINLLEDCSTMIINTACQCLFGEDLRKRLDA--RRFAQLLAKMESS-----LIPAAVF 200
Query: 178 VGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADD 237
+ L + R ++ K+ ++I K + DL+ LL+ +
Sbjct: 201 LPILLKLPLPQSARCHEARTELQKILSEIIIARKAAAVNKDSSTSDLLSGLLSAVYRDGT 260
Query: 238 HQTLDHIKATIMENI-AATDTIKVTLEWSMTNLM-----KNPEAMKKVQKEVRCVVKDKG 291
+L + I+ + A T +T WSM +LM K+ EA++K +E +
Sbjct: 261 PMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNN 320
Query: 292 FVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGR 351
+DE + + + +E++R P + R+ + Y +P + +
Sbjct: 321 VMDE-----MPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 375
Query: 352 DGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYK 411
D + + +P + PER + + G FI FGAG C G + V+ LA
Sbjct: 376 DEEAFPEPRRWDPER----DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRS 428
Query: 412 FDWTMPHGMEIEDLDY 427
+D+ + E+ D DY
Sbjct: 429 YDFQLLRD-EVPDPDY 443
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 302 EYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDE 361
+Y + V+E RF P V ++ +G P V+++++ D W P E
Sbjct: 272 DYAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 362 FIPERFVGSNIDMGGQNFEFIPFGAGRRI----CTGLPVAMPIVELALANLLYKFDWTMP 417
F PERF + D +F FIP G G C G + + I+++A L+ + +P
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 387
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 304 LKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFI 363
LKAV +E LRF P R T EK I I V V + + RD +V+ PD FI
Sbjct: 241 LKAV-EEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFI 299
Query: 364 PERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
P+R ++ FG+G +C G P+A +AL KF
Sbjct: 300 PDRTPNPHLS----------FGSGIHLCLGAPLARLEARIALEEFAKKF 338
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 302 EYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDE 361
+Y + V+E RF P V ++ +G P V+++++ D W P E
Sbjct: 264 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 362 FIPERFVGSNIDMGGQNFEFIPFGAGRRI----CTGLPVAMPIVELALANLLYKFDWTMP 417
F PERF + D +F FIP G G C G + + I+++A L+ + +P
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 302 EYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDE 361
+Y + V+E RF P V ++ +G P V+++++ D W P E
Sbjct: 272 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 362 FIPERFVGSNIDMGGQNFEFIPFGAGRRI----CTGLPVAMPIVELALANLLYKFDWTMP 417
F PERF + D +F FIP G G C G + + I+++A L+ + +P
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 387
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 302 EYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDE 361
+Y + V+E RF P V ++ +G P V+++++ D W P E
Sbjct: 264 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 362 FIPERFVGSNIDMGGQNFEFIPFGAGRRI----CTGLPVAMPIVELALANLLYKFDWTMP 417
F PERF + D +F FIP G G C G + + I+++A L+ + +P
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 274 EAMKKVQKEVRCVVKDKGF-VDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
+ ++ +E+R V+K G + + ++E K+VV E LRF+P + VI+
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 333 GYHIPAKTTVLVNVWAI----GRDGQVWDKPDEFIPERFVG 369
+ K ++ RD +++D+ DEF+PERFVG
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVG 416
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 302 EYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDE 361
+Y + V+E RF P V ++ +G P V+++++ D W P E
Sbjct: 272 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 362 FIPERFVGSNIDMGGQNFEFIPFGAGRRI----CTGLPVAMPIVELALANLLYKFDWTMP 417
F PERF + D +F FIP G G C G + + I+++A L+ + +P
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 387
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 302 EYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDE 361
+Y + V+E RF P V ++ +G P V+++++ D W P E
Sbjct: 264 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 362 FIPERFVGSNIDMGGQNFEFIPFGAGRRI----CTGLPVAMPIVELALANLLYKFDWTMP 417
F PERF + D +F FIP G G C G + + I+++A L+ + +P
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 274 EAMKKVQKEVRCVVKDKGF-VDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVID 332
+ ++ +E+R V+K G + + ++E K+VV E LRF+P + VI+
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 333 GYHIPAKTTVLVNVWAI----GRDGQVWDKPDEFIPERFVG 369
+ K ++ RD +++D+ DEF+PERFVG
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVG 416
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 41/239 (17%)
Query: 175 LPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKT 234
+P W D + G N+R N +++ +L+E ++ +I+VL
Sbjct: 118 MPLFKLWSDYIIG-NKRDENFNYVNNRMVSRLLEIF-------KSDSHGIINVLAG---- 165
Query: 235 ADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVD 294
+L + K T+ E I + + + TNL+ N +R + ++ +D
Sbjct: 166 ----SSLKNRKLTMDEKIKYIMLLIIGGNETTTNLIGN---------MIRVIDENPDIID 212
Query: 295 EDDLPRLEYLKAVVKETLRFQPAAEFVP-RETTEKCVIDGYHIPAKTTVLVNVWAIGRDG 353
+ L+ V+ETLR+ +F+P R E I+ I V+V + + RD
Sbjct: 213 D----ALKNRSGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDE 268
Query: 354 QVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
+D+PD F G+ + FG G +C G P+A +AL ++L F
Sbjct: 269 TFFDEPDLF-----------KIGRREMHLAFGIGIHMCLGAPLARLEASIALNDILNHF 316
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
Query: 304 LKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFI 363
+ VV+E LR+ A V R TT I+G +P+ T V+ + A RD +D PD F+
Sbjct: 287 VDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFL 346
Query: 364 PERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVA---MPIVELALANLLYKFD 413
P R + I FG G C G +A + +V LA + + D
Sbjct: 347 PGR----------KPNRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVD 389
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 32/173 (18%)
Query: 238 HQTLDHI------KATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKG 291
H L H+ + +A +T+ L WS L P+ K+V + +
Sbjct: 200 HPPLSHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL---- 255
Query: 292 FVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGR 351
A +E LR P A + R ++ +P TT++++ + R
Sbjct: 256 --------------AAFQEALRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR 301
Query: 352 DGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAM---PIV 401
+ + + F PERF+ G+ F PFG G+R+C G A+ PIV
Sbjct: 302 --LYFPEGEAFQPERFLAERGTPSGRYF---PFGLGQRLCLGRDFALLEGPIV 349
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 206 LIEDHLDPKRPKVAEKEDLIDVLLAEMKTADDHQ-TLDHIKATIMENIAA-TDTIKVTLE 263
L+ LD +R E + L +L AE AD + + + A + IAA TDT +
Sbjct: 208 LLHGVLDERRRNPLENDVLTMLLQAE---ADGSRLSTKELVALVGAIIAAGTDTTIYLIA 264
Query: 264 WSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDE--DDLPRLEYLKAVVKETLRFQPAAEFV 321
+++ NL+++PEA++ V+ E G + D++ R E + + T+RF
Sbjct: 265 FAVLNLLRSPEALELVKAE-------PGLMRNALDEVLRFENILRI--GTVRFA------ 309
Query: 322 PRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEF 381
R+ E C G I V + + + RDG V+ +PD F R ++
Sbjct: 310 -RQDLEYC---GASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTSAS---------- 355
Query: 382 IPFGAGRRICTGLPVAMPIVELALANLLYKF 412
+ +G G +C G+ +A E+A+ + +F
Sbjct: 356 LAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 252 IAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKET 311
+A +T+ L WS L P+ K+V + + A +E
Sbjct: 220 VAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AAFQEA 261
Query: 312 LRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGR----DGQVWDKPDEFIPERF 367
LR P A + R ++ +P TT++++ + R DG+ F PERF
Sbjct: 262 LRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLHFPDGEA------FRPERF 315
Query: 368 VGSNIDMGGQNFEFIPFGAGRRICTGLPVAM---PIV 401
+ G+ F PFG G+R+C G A+ PIV
Sbjct: 316 LEERGTPSGRYF---PFGLGQRLCLGRDFALLEGPIV 349
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 18/134 (13%)
Query: 303 YLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEF 362
YLKA+ +E LR+ P R+T E+ + I V V + + RD +V+ ++F
Sbjct: 240 YLKAI-EEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKF 298
Query: 363 IPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDWTMPHGMEI 422
IP+R ++ FG+G +C G P+A +A+ +F I
Sbjct: 299 IPDRNPNPHLS----------FGSGIHLCLGAPLARLEARIAIEEFSKRF-------RHI 341
Query: 423 EDLDYDANPGFTLH 436
E LD + P L+
Sbjct: 342 EILDTEKVPNEVLN 355
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 18/134 (13%)
Query: 303 YLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEF 362
YLKA+ +E LR+ P R+T E+ + I V V + + RD +V+ ++F
Sbjct: 240 YLKAI-EEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKF 298
Query: 363 IPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDWTMPHGMEI 422
IP+R ++ FG+G +C G P+A +A+ +F I
Sbjct: 299 IPDRNPNPHLS----------FGSGIHLCLGAPLARLEARIAIEEFSKRF-------RHI 341
Query: 423 EDLDYDANPGFTLH 436
E LD + P L+
Sbjct: 342 EILDTEKVPNEVLN 355
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 32/209 (15%)
Query: 206 LIEDHLDPKRPKVAEKEDLIDVLLAEMKTADDHQ-TLDHIKATIMENIAA-TDTIKVTLE 263
L+ LD +R E + L +L AE AD + + + A + IAA TDT +
Sbjct: 208 LLHGVLDERRRNPLENDVLTMLLQAE---ADGSRLSTKELVALVGAIIAAGTDTTIYLIA 264
Query: 264 WSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPR 323
+++ NL+++PEA++ V+ E + + +DE L + + T+RF R
Sbjct: 265 FAVLNLLRSPEALELVKAEPGLM---RNALDE----VLRFDNILRIGTVRFA-------R 310
Query: 324 ETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIP 383
+ E C G I V + + + RDG V+ +PD F R ++ +
Sbjct: 311 QDLEYC---GASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTSAS----------LA 357
Query: 384 FGAGRRICTGLPVAMPIVELALANLLYKF 412
+G G +C G+ +A E+A+ + +F
Sbjct: 358 YGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 304 LKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFI 363
L V+E LR+ E R E+ I G IP +TVLV A RD + + PD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 328
Query: 364 PERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
P RF D+ + FG G C G P+A E+AL L +F
Sbjct: 329 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 304 LKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFI 363
L V+E LR+ E R E+ I G IP +TVLV A RD + + PD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 327
Query: 364 PERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
P RF D+ + FG G C G P+A E+AL L +F
Sbjct: 328 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 304 LKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFI 363
L V+E LR+ E R E+ I G IP +TVLV A RD + + PD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 327
Query: 364 PERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
P RF D+ + FG G C G P+A E+AL L +F
Sbjct: 328 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 304 LKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFI 363
L V+E LR+ E R E+ I G IP +TVLV A RD + + PD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 328
Query: 364 PERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
P RF D+ + FG G C G P+A E+AL L +F
Sbjct: 329 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 304 LKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFI 363
L V+E LR+ E R E+ I G IP +TVLV A RD + + PD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 328
Query: 364 PERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
P RF D+ + FG G C G P+A E+AL L +F
Sbjct: 329 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 304 LKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFI 363
L V+E LR+ E R E+ I G IP +TVLV A RD P +F
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRD------PSQFP 326
Query: 364 -PERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
P RF D+ + FG G C G P+A E+AL L +F
Sbjct: 327 DPHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 34/213 (15%)
Query: 221 KEDLIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQ 280
++D+I +LL + + D + I+ IA +T + S+ L+++PE + K++
Sbjct: 203 QQDMISMLL-KGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLR 261
Query: 281 KEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKT 340
+ DL + V+E LR++ + R +E I G I
Sbjct: 262 -------------ENPDL-----IGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGE 303
Query: 341 TVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPI 400
V + + A RD ++ PD F D+ + FG G +C G +A
Sbjct: 304 QVYLLLGAANRDPSIFTNPDVF----------DITRSPNPHLSFGHGHHVCLGSSLARLE 353
Query: 401 VELALANLLYKFDWTMPHGMEIEDLDYDANPGF 433
++A+ LL + MP + + D ++ P F
Sbjct: 354 AQIAINTLLQR----MP-SLNLADFEWRYRPLF 381
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 12/108 (11%)
Query: 307 VVKETLRFQPAAEFVP--RETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIP 364
VV+ETLR +PA + +P T+ + DG I +L + A R + D F
Sbjct: 278 VVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDA 337
Query: 365 ERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
R V E + FG G C G P+A V LAL +L +F
Sbjct: 338 TRTVK----------EHLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 264 WSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPR 323
W M L+ +PEA++ V++E++ K E+ +V+ ETLR AA + R
Sbjct: 275 WVMGYLLTHPEALRAVREEIQG---GKHLRLEERQKNTPVFDSVLWETLRLTAAA-LITR 330
Query: 324 ETTEK---CVIDG--YHIPAKTTVLVNVW-AIGRDGQVWDKPDEFIPERFVGSN------ 371
+ T+ C+ +G YH+ + V + + D Q+ +P+ F +RF+ ++
Sbjct: 331 DVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKD 390
Query: 372 -IDMGGQ-NFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFD 413
G + + +P+G +C G A+ ++ + +L +FD
Sbjct: 391 FFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFD 434
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 80/199 (40%), Gaps = 31/199 (15%)
Query: 217 KVAEKEDLIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEW-SMTNLMKNPEA 275
+ A +DL L+ + D H T I +T+ +AA ++L ++ NL +PE
Sbjct: 206 RAAPGDDLTSALIQASENGD-HLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQ 264
Query: 276 MKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQ-PAAEFVPRETTEKCVIDGY 334
R +V L AVV+ETLRF P + + R E +
Sbjct: 265 --------RALV----------LSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDR 306
Query: 335 HIPAKTTVLVNVWAIGRDGQVWD-KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTG 393
IPA ++V+ A+GRD + D F R G+ I FG G +C G
Sbjct: 307 VIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSGNR---------HISFGHGPHVCPG 357
Query: 394 LPVAMPIVELALANLLYKF 412
++ +AL L +F
Sbjct: 358 AALSRMEAGVALPALYARF 376
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 301 LEYLKAVVKETLRFQ-PAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKP 359
+ L V+E LR++ P R E +DG IPA TVLV + R + + P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 360 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDWTMPHG 419
F R D G + FG G C G P+A +A+ LL +
Sbjct: 353 HRFDIRR------DTAGH----LAFGHGIHFCIGAPLARLEARIAVRALLER-------- 394
Query: 420 MEIEDLDYDANPGFTLHKKNPL 441
DL D +PG + NP+
Sbjct: 395 --CPDLALDVSPGELVWYPNPM 414
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 301 LEYLKAVVKETLRFQ-PAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKP 359
+ L V+E LR++ P R E +DG IPA TVLV + R + + P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 360 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDWTMPHG 419
F R D G + FG G C G P+A +A+ LL +
Sbjct: 353 HRFDIRR------DTAGH----LAFGHGIHFCIGAPLARLEARIAVRALLER-------- 394
Query: 420 MEIEDLDYDANPGFTLHKKNPL 441
DL D +PG + NP+
Sbjct: 395 --CPDLALDVSPGELVWYPNPM 414
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 301 LEYLKAVVKETLRFQ-PAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKP 359
+ L V+E LR++ P R E +DG IPA TVLV + R + + P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 360 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFDWTMPHG 419
F R D G + FG G C G P+A +A+ LL +
Sbjct: 353 HRFDIRR------DTAGH----LAFGHGIHFCIGAPLARLEARIAVRALLER-------- 394
Query: 420 MEIEDLDYDANPGFTLHKKNPL 441
DL D +PG + NP+
Sbjct: 395 --CPDLALDVSPGELVWYPNPM 414
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 229 LAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCV-- 286
L EM +++ Q +A +++ A + W + L+KNPEA+ V+ E+ +
Sbjct: 241 LEEMGVSEEMQA----RALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILW 296
Query: 287 -----VKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVI---DGYHIPA 338
V + + L L +V+ E+LR AA F+ RE + DG
Sbjct: 297 QAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLT-AAPFITREVVVDLAMPMADGREFNL 355
Query: 339 K---TTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEF-----------IPF 384
+ +L + RD +++ P+ F RF+ + G + +F +P+
Sbjct: 356 RRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPD---GSEKKDFYKDGKRLKNYNMPW 412
Query: 385 GAGRRICTGLPVAM 398
GAG C G A+
Sbjct: 413 GAGHNHCLGRSYAV 426
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 32/194 (16%)
Query: 229 LAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCV-- 286
L EM +++ Q +A +++ A + W + L+KNPEA+ V+ E+ +
Sbjct: 253 LEEMGVSEEMQA----RALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILW 308
Query: 287 -----VKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVI---DGYHIPA 338
V + + L L +V+ E+LR AA F+ RE + DG
Sbjct: 309 QAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLT-AAPFITREVVVDLAMPMADGREFNL 367
Query: 339 K---TTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEF-----------IPF 384
+ +L + RD +++ P+ F RF+ + G + +F +P+
Sbjct: 368 RRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPD---GSEKKDFYKDGKRLKNYNMPW 424
Query: 385 GAGRRICTGLPVAM 398
GAG C G A+
Sbjct: 425 GAGHNHCLGRSYAV 438
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 11/112 (9%)
Query: 302 EYLKAVVKETLRF-QPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPD 360
E + VV E +R+ P PR + VIDG I A VL ++ RD + PD
Sbjct: 276 EKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPD 335
Query: 361 EFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
R S++ FG G C G +A ++ +A L +F
Sbjct: 336 VLDANRAAVSDVG----------FGHGIHYCVGAALARSMLRMAYQTLWRRF 377
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 92/225 (40%), Gaps = 34/225 (15%)
Query: 188 WNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLDHIKAT 247
W++R + +C +Q L + ++ K P DLI +LA + +++
Sbjct: 207 WDQR-KTELLECAAYFQVLWNERVN-KDPG----NDLIS-MLAHSPATRNMTPEEYLGNV 259
Query: 248 IMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAV 307
++ + DT + ++ + L KNP+ K++ P L ++ +
Sbjct: 260 LLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKAN----------------PAL--VETM 301
Query: 308 VKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERF 367
V E +R+Q + R + G I V++ ++ RD +V D+P+EFI +R
Sbjct: 302 VPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR- 360
Query: 368 VGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
+ + + FG G C G +A + + +L +F
Sbjct: 361 --------PRPRQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 309 KETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFV 368
+E +RF+ + R TT + G I VL+ + + RD + WD PD +
Sbjct: 289 EEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRY------ 342
Query: 369 GSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYK 411
D+ + + FG+G +C G VA E+ LA L K
Sbjct: 343 ----DITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALARK 381
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 298 LPRLEYLKAVVKETLRFQP--AAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQV 355
L R E + + V+E R+ P VPR E + G I A VL + A RD
Sbjct: 281 LDRPELIPSAVEELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQ 340
Query: 356 WDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
+ D ID+ + + FG G C G P+A +++AL LL +
Sbjct: 341 FPDAD----------RIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRL 387
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 278 KVQKEVRCVVKD--KGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYH 335
++ +E+R +K G V + + ++ K+VV E+LR +P + I+ +
Sbjct: 302 QLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHD 361
Query: 336 IP---AKTTVLVNVWAIG-RDGQVWDKPDEFIPERFVG 369
K +L +D +V+D+P+E++P+RFVG
Sbjct: 362 ATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVG 399
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 31/169 (18%)
Query: 228 LLAEMKTADDHQTL--DHIKATIMENI-AATDTIKVTLEWSMTNLMKNPEAMKKVQKEVR 284
LLA M A D + + I +T++ I +T+ + ++ +L+ +P+ + +++
Sbjct: 205 LLALMLDAHDRGLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRR--- 261
Query: 285 CVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLV 344
R + L V+E LR+ P+ + R+ + G + V+V
Sbjct: 262 ---------------RPDLLAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVV 306
Query: 345 NVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTG 393
A RD + +D+PD+F ER + FGAG R C G
Sbjct: 307 LAGAANRDPRRYDRPDDFDIER----------DPVPSMSFGAGMRYCLG 345
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 302 EYLKAVVKETLRFQPAAEFVP-RETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPD 360
+ + A V E LR A+ +P R E + G +PA V+ + D + +D P+
Sbjct: 280 DLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPE 339
Query: 361 EFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYK 411
+D + + FG G C G +A +E+AL LL +
Sbjct: 340 ----------RVDFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRR 380
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 11/95 (11%)
Query: 304 LKAVVKETLRF-QPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEF 362
+ + V+E LRF P ++ R T E G IPA V++ + A RD +PD
Sbjct: 269 ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRL 328
Query: 363 IPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVA 397
R D G F FG G C G +A
Sbjct: 329 DITR------DASGGVF----FGHGIHFCLGAQLA 353
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 11/95 (11%)
Query: 304 LKAVVKETLRF-QPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEF 362
+ + V+E LRF P ++ R T E G IPA V++ + A RD +PD
Sbjct: 269 ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRL 328
Query: 363 IPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVA 397
R D G F FG G C G +A
Sbjct: 329 DITR------DASGGVF----FGHGIHFCLGAQLA 353
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 298 LPRLEYLKAVVKETLRFQP--AAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQV 355
L R E + + V+E R+ P PR E + G I A VL + A RD
Sbjct: 281 LDRPELIPSAVEELTRWVPLGVGTAAPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQ 340
Query: 356 WDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
+ D ID+ + + FG G C G P+A +++AL LL +
Sbjct: 341 FPDAD----------RIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRL 387
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 298 LPRLEYLKAVVKETLRFQP--AAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQV 355
L R E + + V+E R+ P PR E + G I A VL + A RD
Sbjct: 281 LDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQ 340
Query: 356 WDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKF 412
+ D ID+ + + FG G C G P+A +++AL LL +
Sbjct: 341 FPDAD----------RIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRL 387
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 30/193 (15%)
Query: 221 KEDLIDVLLAEMKTADDHQTLDHIKATIME-NIAATDTIKVTLEWSMTNLMKNPEAMKKV 279
K+D++ LLA K ++ +I A + A DT + ++ L +NPE +
Sbjct: 235 KDDVMS-LLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALA 293
Query: 280 QKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAK 339
+ + + PRL V E +R+ + R + G +I
Sbjct: 294 KSDPALI------------PRL------VDEAVRWTAPVKSFMRTALADTEVRGQNIKRG 335
Query: 340 TTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMP 399
++++ + RD +V+ PDEF RF N +G FG G +C G +A
Sbjct: 336 DRIMLSYPSANRDEEVFSNPDEFDITRF--PNRHLG--------FGWGAHMCLGQHLAKL 385
Query: 400 IVELALANLLYKF 412
+++ LL K
Sbjct: 386 EMKIFFEELLPKL 398
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 309 KETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFV 368
+E +RF+ + R TT + + G I VL+ + + RD + W PD +
Sbjct: 287 EEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLY------ 340
Query: 369 GSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYK 411
D+ + + FG+G +C G VA E+ L+ L K
Sbjct: 341 ----DITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARK 379
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 31/199 (15%)
Query: 217 KVAEKEDLI-DVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEA 275
KV +DL D++ A D L + AT++ +A +T L +M + ++P+
Sbjct: 218 KVEPGDDLTSDIVRAFHDGVLDDYELRTLVATVL--VAGYETTNHQLALAMYDFAQHPDQ 275
Query: 276 MKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVP-RETTEKCVIDGY 334
K+++ E V+E LR+ P R E ++G
Sbjct: 276 WMKIKENP------------------ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGV 317
Query: 335 HIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGL 394
IP T V + RD +V+ D F +I + + I FG G C G
Sbjct: 318 RIPTGTPVFMCAHVAHRDPRVFADADRF--------DITV-KREAPSIAFGGGPHFCLGT 368
Query: 395 PVAMPIVELALANLLYKFD 413
+A + A+A L + D
Sbjct: 369 ALARLELTEAVAALATRLD 387
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Query: 306 AVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPE 365
A++ E +R P R TE I G I A + + + A RD +V+D PD F
Sbjct: 268 AIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHT 327
Query: 366 RFVGSNIDMGGQNFEFIPFGAGRRICTG 393
R ++ ++ FG G C G
Sbjct: 328 RPPAASRNLS--------FGLGPHSCAG 347
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 31/199 (15%)
Query: 217 KVAEKEDLI-DVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEA 275
KV +DL D++ A D L + AT++ +A +T L +M + ++P+
Sbjct: 208 KVEPGDDLTSDIVRAFHDGVLDDYELRTLVATVL--VAGYETTNHQLALAMYDFAQHPDQ 265
Query: 276 MKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVP-RETTEKCVIDGY 334
K+++ E V+E LR+ P R E ++G
Sbjct: 266 WMKIKENP------------------ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGV 307
Query: 335 HIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGL 394
IP T V + RD +V+ D F +I + + I FG G C G
Sbjct: 308 RIPTGTPVFMCAHVAHRDPRVFADADRF--------DITV-KREAPSIAFGGGPHFCLGT 358
Query: 395 PVAMPIVELALANLLYKFD 413
+A + A+A L + D
Sbjct: 359 ALARLELTEAVAALATRLD 377
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Query: 306 AVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPE 365
A++ E +R P R TE I G I A + + + A RD +V+D PD F
Sbjct: 266 AIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHT 325
Query: 366 RFVGSNIDMGGQNFEFIPFGAGRRICTG 393
R ++ ++ FG G C G
Sbjct: 326 RPPAASRNLS--------FGLGPHSCAG 345
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 83/219 (37%), Gaps = 32/219 (14%)
Query: 224 LIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEV 283
L+ L+A+ + + I ++ IA +T S+ L+ +PE ++
Sbjct: 215 LVGALVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRA-- 272
Query: 284 RCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVP-RETTEKCVIDGYHIPAKTTV 342
D+ V V+E LR+ A+ R T ++G I A V
Sbjct: 273 -----DRSLV-----------PGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGV 316
Query: 343 LVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVE 402
+V RDG V++ PD +D+ + FG G C G +A +E
Sbjct: 317 IVVNSIANRDGTVYEDPDA----------LDIHRSARHHLAFGFGVHQCLGQNLARLELE 366
Query: 403 LALANLLYKFDWTMPHGMEIEDLDYDANPGFTLHKKNPL 441
+ L L+ + T+ + +E L PG T+ N L
Sbjct: 367 VILNALMDRVP-TLRLAVPVEQLVL--RPGTTIQGVNEL 402
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 73/200 (36%), Gaps = 29/200 (14%)
Query: 214 KRPKVAEKEDLIDVLLAEMKTADDHQ--TLDHIKATIMENIAATDTIKVTLEWSMTNLMK 271
+R + +D I L+A AD TL + T A DT+ L SM L +
Sbjct: 208 ERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTFTMVTAGNDTVTGMLGGSMPLLHR 267
Query: 272 NPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVI 331
P+ + R ++ D E + V+E LR + + R TT I
Sbjct: 268 RPD-------QRRLLLDDP-----------EGIPDAVEELLRLTSPVQGLARTTTRDVTI 309
Query: 332 DGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRIC 391
IPA VL+ + RD + + PD + +D+ + F G C
Sbjct: 310 GDTTIPAGRRVLLLYGSANRDERQY-GPD--------AAELDVTRCPRNILTFSHGAHHC 360
Query: 392 TGLPVAMPIVELALANLLYK 411
G A +AL LL +
Sbjct: 361 LGAAAARMQCRVALTELLAR 380
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 302 EYLKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDE 361
E A V+E +R+ P + V R E + + IP + V+ + + RD + PD
Sbjct: 285 ESTPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPD- 343
Query: 362 FIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLL 409
+D+ + FG G C G +A E+ L LL
Sbjct: 344 ---------VLDVHRAAERQVGFGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 83/219 (37%), Gaps = 32/219 (14%)
Query: 224 LIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEV 283
L+ L+A+ + + I ++ IA +T S+ L+ +PE ++
Sbjct: 215 LVGALVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRA-- 272
Query: 284 RCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVP-RETTEKCVIDGYHIPAKTTV 342
D+ V V+E LR+ A+ R T ++G I A V
Sbjct: 273 -----DRSLV-----------PGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGV 316
Query: 343 LVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVE 402
+V RDG V++ PD +D+ + FG G C G +A +E
Sbjct: 317 IVVNSIANRDGTVYEDPDA----------LDIHRSARHHLAFGFGVHQCLGQNLARLELE 366
Query: 403 LALANLLYKFDWTMPHGMEIEDLDYDANPGFTLHKKNPL 441
+ L L+ + T+ + +E L PG T+ N L
Sbjct: 367 VILNALMDRVP-TLRLAVPVEQLVL--RPGTTIQGVNEL 402
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 83/219 (37%), Gaps = 32/219 (14%)
Query: 224 LIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEV 283
L+ L+A+ + + I ++ IA +T S+ L+ +PE ++
Sbjct: 215 LVGALVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRA-- 272
Query: 284 RCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVP-RETTEKCVIDGYHIPAKTTV 342
D+ V V+E LR+ A+ R T ++G I A V
Sbjct: 273 -----DRSLV-----------PGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGV 316
Query: 343 LVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVE 402
+V RDG V++ PD +D+ + FG G C G +A +E
Sbjct: 317 IVVNSIANRDGTVYEDPDA----------LDIHRSARHHLAFGFGVHQCLGQNLARLELE 366
Query: 403 LALANLLYKFDWTMPHGMEIEDLDYDANPGFTLHKKNPL 441
+ L L+ + T+ + +E L PG T+ N L
Sbjct: 367 VILNALMDRVP-TLRLAVPVEQLVL--RPGTTIQGVNEL 402
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 83/219 (37%), Gaps = 32/219 (14%)
Query: 224 LIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMKKVQKEV 283
L+ L+A+ + + I ++ IA +T S+ L+ +PE ++
Sbjct: 215 LVGALVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRA-- 272
Query: 284 RCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVP-RETTEKCVIDGYHIPAKTTV 342
D+ V V+E LR+ A+ R T ++G I A V
Sbjct: 273 -----DRSLV-----------PGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGV 316
Query: 343 LVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVE 402
+V RDG V++ PD +D+ + FG G C G +A +E
Sbjct: 317 IVVNSIANRDGTVYEDPDA----------LDIHRSARHHLAFGFGVHQCLGQNLARLELE 366
Query: 403 LALANLLYKFDWTMPHGMEIEDLDYDANPGFTLHKKNPL 441
+ L L+ + T+ + +E L PG T+ N L
Sbjct: 367 VILNALMDRVP-TLRLAVPVEQLVL--RPGTTIQGVNEL 402
>pdb|3THW|B Chain B, Human Mutsbeta Complexed With An Idl Of 4 Bases (Loop4)
And Adp
pdb|3THX|B Chain B, Human Mutsbeta Complexed With An Idl Of 3 Bases (Loop3)
And Adp
pdb|3THY|B Chain B, Human Mutsbeta Complexed With An Idl Of 2 Bases (Loop2)
And Adp
pdb|3THZ|B Chain B, Human Mutsbeta Complexed With An Idl Of 6 Bases (Loop6)
And Adp
Length = 918
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 64/162 (39%), Gaps = 31/162 (19%)
Query: 90 IDEIFRMIEKISKLGAAPAAADDDYVSSEAPINLCETAMTLIRNIIFRVGFGKRFEDEST 149
IDEI +++I K+ P+A E I + +A++ I +VG ST
Sbjct: 507 IDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVG--------ST 558
Query: 150 AAVSRLHSVF-AETQAMVGRIFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIE 208
AVSR HS F E + ++ + L WLD L ++ S C V+
Sbjct: 559 KAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYH---SLCKAVHHLATV 615
Query: 209 DHL----------DPKRPKVAEKEDL---------IDVLLAE 231
D + D RP V E+ + IDVLL E
Sbjct: 616 DCIFSLAKVAKQGDYCRPTVQEERKIVIKNGRHPVIDVLLGE 657
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 304 LKAVVKETLRFQPAAEFVPRETTEKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFI 363
L +V+E +R+ + R + G I A +++N A D + +P +F
Sbjct: 322 LPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFD 381
Query: 364 PERFVGSNIDMGGQNFEFIPFGAGRRICTGLPVAMPIVELALANLLYKFD 413
P R ++ FGAG C GL +A + + L LL + D
Sbjct: 382 PTRPANRHL----------AFGAGSHQCLGLHLARLEMRVLLDVLLDRVD 421
>pdb|2OJL|A Chain A, Crystal Structure Of Q7waf1_borpa From Bordetella
Parapertussis. Northeast Structural Genomics Target
Bpr68.
pdb|2OJL|B Chain B, Crystal Structure Of Q7waf1_borpa From Bordetella
Parapertussis. Northeast Structural Genomics Target
Bpr68
Length = 108
Score = 31.6 bits (70), Expect = 0.84, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 188 WNRRLRNNFSDCDKVYQQLIEDHLDPKRP 216
W+R + F + KV +Q + DHLDP RP
Sbjct: 63 WDREVDGGFPEA-KVLKQRVRDHLDPGRP 90
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 72/200 (36%), Gaps = 29/200 (14%)
Query: 214 KRPKVAEKEDLIDVLLAEMKTADDHQ--TLDHIKATIMENIAATDTIKVTLEWSMTNLMK 271
+R + +D I L+A AD TL + T DT+ L SM L +
Sbjct: 208 ERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHR 267
Query: 272 NPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVI 331
P+ + R ++ D E + V+E LR + + R TT I
Sbjct: 268 RPD-------QRRLLLDDP-----------EGIPDAVEELLRLTSPVQGLARTTTRDVTI 309
Query: 332 DGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRIC 391
IPA VL+ + RD + + PD + +D+ + F G C
Sbjct: 310 GDTTIPAGRRVLLLYGSANRDERQY-GPD--------AAELDVTRCPRNILTFSHGAHHC 360
Query: 392 TGLPVAMPIVELALANLLYK 411
G A +AL LL +
Sbjct: 361 LGAAAARMQCRVALTELLAR 380
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 72/200 (36%), Gaps = 29/200 (14%)
Query: 214 KRPKVAEKEDLIDVLLAEMKTADDHQ--TLDHIKATIMENIAATDTIKVTLEWSMTNLMK 271
+R + +D I L+A AD TL + T DT+ L SM L +
Sbjct: 209 ERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHR 268
Query: 272 NPEAMKKVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEFVPRETTEKCVI 331
P+ + R ++ D E + V+E LR + + R TT I
Sbjct: 269 RPD-------QRRLLLDDP-----------EGIPDAVEELLRLTSPVQGLARTTTRDVTI 310
Query: 332 DGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRIC 391
IPA VL+ + RD + + PD + +D+ + F G C
Sbjct: 311 GDTTIPAGRRVLLLYGSANRDERQY-GPD--------AAELDVTRCPRNILTFSHGAHHC 361
Query: 392 TGLPVAMPIVELALANLLYK 411
G A +AL LL +
Sbjct: 362 LGAAAARMQCRVALTELLAR 381
>pdb|3HBZ|A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase
(Bt_2081) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.05 A Resolution
Length = 342
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Query: 203 YQQLIEDHLDPKRPKVAEKEDLIDVLLAEMKTADDHQTLDHIKATIMEN---IAATDTIK 259
Y+ D V+ K D+ D+ +T++ TLD A N IA D K
Sbjct: 217 YKYKAGDQFTEGGKPVSGKRDICDIYAIXYETSESVPTLDGTNAFTSPNLVSIARIDDAK 276
Query: 260 VTLEWSMTNLMKNPEAMKKVQKE 282
T EW+ L + + K + KE
Sbjct: 277 ETDEWTYFKLPFHXLSGKYIDKE 299
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 10/86 (11%)
Query: 327 EKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGA 386
E + G I A V V+ A RD V+ PD ID+ + +G
Sbjct: 302 EDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPD----------RIDLDRDPNPHLAYGN 351
Query: 387 GRRICTGLPVAMPIVELALANLLYKF 412
G CTG +A EL + LL +
Sbjct: 352 GHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 27/196 (13%)
Query: 218 VAEKEDLIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMK 277
V K+D+I L E + D ++ + +A T+ + + L ++P+ +
Sbjct: 203 VEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 262
Query: 278 KVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHI 336
+++ P L V+E R+ A+ + R E +I +
Sbjct: 263 QLKAN----------------PSLA--PQFVEELCRYHTASALAIKRTAKEDVMIGDKLV 304
Query: 337 PAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPV 396
A ++ + + RD +V++ PDEF R +G FG G C +
Sbjct: 305 RANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLG--------FGFGDHRCIAEHL 356
Query: 397 AMPIVELALANLLYKF 412
A + + L KF
Sbjct: 357 AKAELTTVFSTLYQKF 372
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 27/196 (13%)
Query: 218 VAEKEDLIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMK 277
V K+D+I L E + D ++ + +A T+ + + L ++P+ +
Sbjct: 203 VEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 262
Query: 278 KVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHI 336
+++ P L V+E R+ A+ + R E +I +
Sbjct: 263 QLKAN----------------PSLA--PQFVEELCRYHTASALAIKRTAKEDVMIGDKLV 304
Query: 337 PAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPV 396
A ++ + + RD +V++ PDEF R +G FG G C +
Sbjct: 305 RANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLG--------FGFGDHRCIAEHL 356
Query: 397 AMPIVELALANLLYKF 412
A + + L KF
Sbjct: 357 AKAELTTVFSTLYQKF 372
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 10/86 (11%)
Query: 327 EKCVIDGYHIPAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGA 386
E + G I A V V+ A RD V+ PD ID+ + +G
Sbjct: 302 EDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPD----------RIDLDRDPNPHLAYGN 351
Query: 387 GRRICTGLPVAMPIVELALANLLYKF 412
G CTG +A EL + LL +
Sbjct: 352 GHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 27/196 (13%)
Query: 218 VAEKEDLIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMK 277
V K+D+I L E + D ++ + +A T+ + + L ++P+ +
Sbjct: 204 VEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 263
Query: 278 KVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHI 336
+++ P L V+E R+ A+ + R E +I +
Sbjct: 264 QLKAN----------------PSLA--PQFVEELCRYHTASALAIKRTAKEDVMIGDKLV 305
Query: 337 PAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPV 396
A ++ + + RD +V++ PDEF R +G FG G C +
Sbjct: 306 RANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLG--------FGFGDHRCIAEHL 357
Query: 397 AMPIVELALANLLYKF 412
A + + L KF
Sbjct: 358 AKAELTTVFSTLYQKF 373
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 27/196 (13%)
Query: 218 VAEKEDLIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMK 277
V K+D+I L E + D ++ + +A T+ + + L ++P+ +
Sbjct: 204 VEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 263
Query: 278 KVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHI 336
+++ P L V+E R+ A+ + R E +I +
Sbjct: 264 QLKAN----------------PSLA--PQFVEELCRYHTASALAIKRTAKEDVMIGDKLV 305
Query: 337 PAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPV 396
A ++ + + RD +V++ PDEF R +G FG G C +
Sbjct: 306 RANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLG--------FGFGDHRCIAEHL 357
Query: 397 AMPIVELALANLLYKF 412
A + + L KF
Sbjct: 358 AKAELTTVFSTLYQKF 373
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 27/196 (13%)
Query: 218 VAEKEDLIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMK 277
V K+D+I L E + D ++ + +A T+ + + L ++P+ +
Sbjct: 205 VEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 264
Query: 278 KVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHI 336
+++ P L V+E R+ A+ + R E +I +
Sbjct: 265 QLKAN----------------PSLA--PQFVEELCRYHTASALAIKRTAKEDVMIGDKLV 306
Query: 337 PAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPV 396
A ++ + + RD +V++ PDEF R +G FG G C +
Sbjct: 307 RANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLG--------FGFGDHRCIAEHL 358
Query: 397 AMPIVELALANLLYKF 412
A + + L KF
Sbjct: 359 AKAELTTVFSTLYQKF 374
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 27/196 (13%)
Query: 218 VAEKEDLIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMK 277
V K+D+I L E + D ++ + +A T+ + + L ++P+ +
Sbjct: 203 VEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 262
Query: 278 KVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHI 336
+++ P L V+E R+ A + R E +I +
Sbjct: 263 QLKAN----------------PSLA--PQFVEELCRYHTATALAIKRTAKEDVMIGDKLV 304
Query: 337 PAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPV 396
A ++ + + RD +V++ PDEF R +G FG G C +
Sbjct: 305 RANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLG--------FGFGDHRCIAEHL 356
Query: 397 AMPIVELALANLLYKF 412
A + + L KF
Sbjct: 357 AKAELTTVFSTLYQKF 372
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 27/196 (13%)
Query: 218 VAEKEDLIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMK 277
V K+D+I L E + D ++ + +A T+ + + L ++P+ +
Sbjct: 204 VEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 263
Query: 278 KVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHI 336
+++ P L V+E R+ A + R E +I +
Sbjct: 264 QLKAN----------------PSLA--PQFVEELCRYHTATALAIKRTAKEDVMIGDKLV 305
Query: 337 PAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPV 396
A ++ + + RD +V++ PDEF R +G FG G C +
Sbjct: 306 RANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLG--------FGFGDHRCIAEHL 357
Query: 397 AMPIVELALANLLYKF 412
A + + L KF
Sbjct: 358 AKAELTTVFSTLYQKF 373
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 27/196 (13%)
Query: 218 VAEKEDLIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMK 277
V K+D+I L E + D ++ + +A T+ + + L ++P+ +
Sbjct: 203 VEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 262
Query: 278 KVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHI 336
+++ P L V+E R+ A + R E +I +
Sbjct: 263 QLKAN----------------PSLA--PQFVEELCRYHTAVALAIKRTAKEDVMIGDKLV 304
Query: 337 PAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPV 396
A ++ + + RD +V++ PDEF R +G FG G C +
Sbjct: 305 RANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLG--------FGFGDHRCIAEHL 356
Query: 397 AMPIVELALANLLYKF 412
A + + L KF
Sbjct: 357 AKAELTTVFSTLYQKF 372
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 27/196 (13%)
Query: 218 VAEKEDLIDVLLAEMKTADDHQTLDHIKATIMENIAATDTIKVTLEWSMTNLMKNPEAMK 277
V K+D+I L E + D ++ + +A T+ + + L ++P+ +
Sbjct: 204 VEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 263
Query: 278 KVQKEVRCVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAEF-VPRETTEKCVIDGYHI 336
+++ P L V+E R+ A + R E +I +
Sbjct: 264 QLKAN----------------PSLA--PQFVEELCRYHTAVALAIKRTAKEDVMIGDKLV 305
Query: 337 PAKTTVLVNVWAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPV 396
A ++ + + RD +V++ PDEF R +G FG G C +
Sbjct: 306 RANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLG--------FGFGDHRCIAEHL 357
Query: 397 AMPIVELALANLLYKF 412
A + + L KF
Sbjct: 358 AKAELTTVFSTLYQKF 373
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,202,163
Number of Sequences: 62578
Number of extensions: 542347
Number of successful extensions: 1683
Number of sequences better than 100.0: 184
Number of HSP's better than 100.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 1388
Number of HSP's gapped (non-prelim): 210
length of query: 449
length of database: 14,973,337
effective HSP length: 102
effective length of query: 347
effective length of database: 8,590,381
effective search space: 2980862207
effective search space used: 2980862207
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)